LOCUS       DASCNL010000001         3033 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000002781, whole genome shotgun sequence.
ACCESSION   DASCNL010000001 DASCNL010000000
VERSION     DASCNL010000001.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3033)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000002781"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(205..681)
                     /gene="smpB"
                     /locus_tag="QF359_00005"
     CDS             complement(205..681)
                     /gene="smpB"
                     /locus_tag="QF359_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HJO85319.1"
                     /translation="MTKKKKSSENIAARNRKARHDYFIEDNYEAGIALQGTEIKSIRS
                     GRVSIEEAYASEEGGELYLINAYIPEYQAGGRDQHETRRPRKLLLHKKELAKMFNAVN
                     REGMTIVPLSLYFNKRGMLKVDLGMAKGKRQYDKRQSDKARDWKRDKARIMRGKNG"
     gene            complement(693..1568)
                     /gene="dapA"
                     /locus_tag="QF359_00010"
     CDS             complement(693..1568)
                     /gene="dapA"
                     /locus_tag="QF359_00010"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HJO85320.1"
                     /translation="MFKGSFVALITPFKGGQVDEEASRNFVEWQINEGTNGLVPVGTT
                     GESPTLSHEEHMRVVEICIEVAAGRVPVIAGAGSNSTEEAIILSKHAKTAGADAALVV
                     TPYYNKPTQEGLYRHYDAIQSQADIPVIIYNIPGRSIVDMSVQTMARLAELPNIAGIK
                     DATGDLNRPMLTAAACGRDFVQLSGEDGTAIPFNAGGGHGCISVTGNIAPKLCAEMQA
                     AWFDGNVARAMELQDLLMPVHSAMFCETSPGPVKYAAELLGLASADARLPICEIADSS
                     KTAVENALKGAGILS"
     gene            1743..>3033
                     /locus_tag="QF359_00015"
     CDS             1743..>3033
                     /locus_tag="QF359_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HJO85321.1"
                     /translation="MRYSILIGISIILLASGVSEFARANDWIDSANKSVTLSKQDVRA
                     AASIQKLVKRNKWQDIKKQTGRINNKILQRALTWQRYAARNSGASYYDIVRFMAERPN
                     WPSQRGLRQRAEEAMTADMDPDRVVKWFEDQAPMTPDGGIRLGAALLMLNKKSEAEKV
                     LQSTWVHGNFGARQERQFYKHYRRYLTRENHIERLERLLWRGRYYPVRRMLMKVNKDY
                     RALAFARITLRRYRGAVDRAISKVPEKLINHPGLVFERLRWRRRKGRDLDARKLLENL
                     PKNLSHPERWWQEKALLARRALHAGHISEAYKLVKDHRLQKGEGFVEGEWLAGWIALR
                     FLKESKPAFKHFVALFEAAKYPISRARGAYWAGRAAEAMEKPELSNIWFDKAAIYSMT
                     YYGQLAAAKKSTDKHIQFPPSPVNGSKDAEKFEADEIV"
BASE COUNT          745 a          745 c          757 g          786 t
ORIGIN      
        1 agacattcca aatatactga ccaaatacta aatcccctgt atcttaggct ttttaatgtc
       61 tatatgaaaa atatttagac tgtccatttt tatatgttca aatacgtata tggacagcct
      121 aaatgtctct gggagtgaat aaacactacg gataagctaa tgctgagcag taaagaacta
      181 atggataaaa ttgaaaacaa ataatcaacc attcttgccg cgcatgatgc gggccttgtc
      241 gcgcttccag tcgcgggctt tatcggattg gcgtttatca tattggcgtt tacctttggc
      301 catacccaaa tcaactttca acatgccgcg tttattgaaa tagagtgaca aaggcacgat
      361 cgtcattcct tcccgattga ctgcattgaa cattttcgcc aactcttttt tgtgcagtag
      421 cagtttgcgc ggtcgccggg tttcatgctg atcgcgcccg cccgcttgat attcaggtat
      481 ataagcgttg atcagatata gctcaccgcc ctcttccgag gcataggctt cttcaatgct
      541 gacccggcct gaacggatgg atttaatctc ggtgccttgc agggcgatac cagcctcgta
      601 attatcctcg ataaaatagt catggcgcgc tttacggttc cgcgccgcta tgttctcgct
      661 ggattttttc tttttagtca tcgcactaga gtttaggaca gaatgccggc gcctttgagg
      721 gcattttcga cagctgtttt gctgctatcg gcaatctcac agatcggcag gcgcgcatca
      781 gcggaggcaa ggccgagcaa ttcggcggca tatttcaccg gtcccggact ggtttcgcag
      841 aacatcgccg aatgcaccgg catcagcagg tcttgcagct ccattgcgcg ggcgacattg
      901 ccgtcaaacc aggctgcctg catttccgca catagttttg gcgcgatatt accggtcact
      961 gaaatgcagc catgaccgcc acccgcatta aacggaatgg cggtgccatc ctcacctgag
     1021 agttggacga agtctctgcc acaggccgcc gccgtcagca tcggccggtt gagatcgccg
     1081 gttgcgtctt tgataccggc aatgtttggt agttcggcca gccgcgccat cgtctggaca
     1141 ctcatatcga caatactacg ccccggaata ttatagatga taaccggaat atcagcttgc
     1201 gactggatgg catcatagtg acggtacaac ccttcctgag tcggtttgtt gtaataaggc
     1261 gtcaccacca acgctgcatc ggcgccggca gtcttcgcat gtttggagag tatgatcgct
     1321 tcttcggtcg agtttgagcc ggcaccagca attaccggca ctcggccagc tgccacttcg
     1381 atgcaaattt ccaccacccg catatgttct tcatggctga gggttggcga ttcgccggtt
     1441 gtgccaaccg gcaccagtcc atttgttccc tcgttaatct gccactcgac aaaattacgg
     1501 gaagcctcct cgtcgacctg accgccttta aacggcgtga tgagggcaac gaacgatcct
     1561 ttaaacatac tctctctcct aaaattcgtg gcagaacata gccctagcag ctgttggcgg
     1621 caagatgtga tgcgctatta ttttgaaatt tcttgactca ttgtttggtt cggtttctcc
     1681 cactagactc tttctaacaa ttatttaatc aatttaggga attatcacta aagaggagtc
     1741 gaatgcgtta ttccattctc attggaataa gtattatttt gctggcaagt ggtgtcagcg
     1801 aatttgcgcg ggcgaacgac tggatagatt ccgccaataa gtctgttact ttgtctaagc
     1861 aggacgtgcg cgctgctgcc agtattcaga aattggtaaa gcgtaataaa tggcaagata
     1921 ttaaaaaaca aactgggcgg attaataata aaatcttaca gcgtgctctt acctggcagc
     1981 gttatgctgc acggaattca ggtgcttcct attatgacat tgtccggttt atggccgagc
     2041 gacccaactg gccgtcgcaa cgcggcctgc ggcaacgcgc tgaagaagcc atgacagctg
     2101 atatggaccc ggatagggtt gtaaaatggt tcgaagacca ggcgccgatg acgccggatg
     2161 gtggtattag gttgggagct gctctgttga tgcttaataa aaaatccgag gcggaaaaag
     2221 ttctacaaag tacttgggtg catggtaatt ttggggctcg gcaggagcgt caattttata
     2281 aacactatcg ccgctattta acccgggaaa accacattga acggctggag cggttgttat
     2341 ggcgaggccg gtactatcct gtgcgtcgga tgctgatgaa agtaaacaaa gattatcgcg
     2401 ccctggcttt tgcccggatt accctccggc gttatcgcgg cgcggttgac cgcgccatct
     2461 ctaaagtgcc ggaaaagctg attaatcatc caggcttggt atttgaaaga cttcgctggc
     2521 ggcggcgcaa agggcgtgat ctcgatgccc gaaagctgct tgaaaacctg ccgaagaatc
     2581 tcagccatcc cgaacgctgg tggcaggaga aagccttgct tgcccgccgg gccttgcatg
     2641 ccggtcatat ttccgaagct tataaattag tgaaagatca tcggctgcaa aaaggcgaag
     2701 gctttgttga aggtgaatgg ctggccgggt ggatagctct aaggtttttg aaagaaagta
     2761 agccggcctt taaacatttc gtcgctttgt ttgaagcggc aaaatatccg atcagccgtg
     2821 cccgtggcgc ctattgggct ggccgcgccg ccgaagcaat ggaaaagcca gaactttcta
     2881 acatctggtt cgataaagca gccatttact ccatgaccta ttatggccaa cttgcggctg
     2941 ctaaaaaatc tactgataag catatccagt ttccgccctc gccggtaaac ggcagcaaag
     3001 acgccgaaaa atttgaagca gatgaaatag tta
//
LOCUS       DASCNL010000002         3146 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000006575, whole genome shotgun sequence.
ACCESSION   DASCNL010000002 DASCNL010000000
VERSION     DASCNL010000002.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000006575"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(257..1066)
                     /locus_tag="QF359_00020"
     CDS             complement(257..1066)
                     /locus_tag="QF359_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019646841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HJO85322.1"
                     /translation="MFKKIYIAAFVLVLSAGMAGIKSNPVQASGEVAHPPSQEWTTDG
                     LFGFFDRKQIKRGWQVYSEICASCHSVRLLYYRHLGEIGFSSDEVKKIAAEAEVAAGP
                     NEDGETHNDGELIVRPGKPFDKIVSPYPNDLAARAANAGALPPDLSLITKARKNGANY
                     LHALLTGYKDAPGDFKLSEDMNYNPYFPGSQIAMGAPLSEDGVEYAPEIADGKKATVD
                     QMAKDITAFLIWAAEPELEERKRIGVKVMLFLIVFTAMLYAVKRQVWAKLH"
     gene            complement(1066..2346)
                     /locus_tag="QF359_00025"
     CDS             complement(1066..2346)
                     /locus_tag="QF359_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6"
                     /protein_id="HJO85323.1"
                     /translation="MSSRTWKNPIIKWVDHRLPVFTFLDHAIVEYPTPRNLNYWWNFG
                     SLAGVILVVLIGTGIILAMNYTPHTSMAFDSVERIMRDVNYGWLIRYLHSNGGSMFFI
                     CVYIHIFRGMYYGSYKEPRELLWIIGIFIFFAMMSAAFLGYVLPWGQMSFWGATVITN
                     LFSIIPFFGESIVQWLWGGFSIDNPTLNKFYSLHYLMPFVIFALVFVHLWALHTHKSS
                     NPLGIEVQGDKDEIPFHPYYTAKDAYGFGVFLIFFLGFTFFAPNFFGEPDNYIEANPL
                     VTPPHIVPEWYFLPFYAILRAVPDNFVDVWGILPVIVSAKAAGVIAMFASILLLLLLP
                     WLDTSKVRSTKFRPTYFWLFWLFVIDTVILGFMGAKPAEGTFLLIGRLATAYYFLHLL
                     IFIPLVGKFEKTKPLPDSISTAVTAGGSDAKEGS"
     gene            complement(2358..2930)
                     /gene="petA"
                     /locus_tag="QF359_00030"
     CDS             complement(2358..2930)
                     /gene="petA"
                     /locus_tag="QF359_00030"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HJO85324.1"
                     /translation="MVDTASTAESAGHGSSDESHDDTKRDFLLYSTIAVGAAGTVMAA
                     WPFIDTMNPSKDVLALASTELDISSVEVGQSITTIWRGKPVFVRRRTAKEIEAAQATE
                     LIGLIDPEADKDRVKKSEWLVMIGICTHLGCIPMGQKSGDTKGEFGGWFCPCHGSHYD
                     TSGRIRKGPAPENLAIPPYKFVDDTNILIG"
BASE COUNT          888 a          776 c          724 g          758 t
ORIGIN      
        1 tgcagaaagt tggccactgt ttgtggtgct ttttccggtt ccagttcaat ggtgaaatca
       61 ccaacattag ttttgaaata aaccttcggt ttaccggcgg ccgctagatt accggcaatg
      121 gcaaaagccg ccacgaacga caatagcgcc acaattagat ttttcattct tgtactccca
      181 aaaaaagaaa ggcgttcaga tagcttaaac tatctaaacg cctctacttc aaataaaatt
      241 ttcgaaatca gctgctttaa tgcagcttgg cccaaacctg acgtttcacg gcataaagca
      301 tagctgtaaa gacaatcagg aacagcatca ccttgacgcc tatccgcttg cgttcttcca
      361 gttcaggttc agccgcccaa atcaagaagg cggtaatatc cttggccatt tgatcaaccg
      421 tcgctttttt cccatcggca atttccgggg catattcaac gccatcctcg ctaaggggtg
      481 cgcccatggc gatctgcgag cctgggaagt acggattgta gttcatgtct tctgatagtt
      541 tgaaatcacc aggcgcatct ttatagcctg tcaacaaggc atgcagataa ttggcgccat
      601 ttttccgggc tttggttatc aaagacagat caggcggcaa ggctccggca ttggcggctc
      661 gtgcagcaag atcattggga tagggtgaga cgatcttatc gaacggttta cctgggcgca
      721 caataagctc accatcatta tgagtctcac cgtcctcatt tggtccggct gccacttcag
      781 cttcagctgc gatctttttt acttcatccg aagaaaaacc gatttcccca agatggcggt
      841 aataaagcag gcgcacgcta tggcacgacg cacagatttc gctgtaaacc tgccagccgc
      901 gtttgatttg tttgcgatca aagaagccaa acagaccgtc ggtcgtccat tcttgggatg
      961 gtggatgagc aacttcaccc gaagcttgaa ccgggttact ttttatacca gccattccag
     1021 cactgagcac aagtacgaaa gcggcaatat aaattttctt aaacattagc tgccctcctt
     1081 cgcatcagat ccgccggcag taactgccgt actaatacta tctggtaatg gtttggtttt
     1141 ctcaaatttg ccaaccagtg gaataaagat cagcagatgg aggaagtaat aggcagtcgc
     1201 caatcggccg atgagcagga atgttccttc agcaggtttg gcgcccataa agcctaaaat
     1261 gaccgtgtcg atgacaaaca accagaacag ccagaaatag gttggccgga atttggtgct
     1321 tctcactttg gacgtgtcca gccacggcaa caacagcaac aataagatcg aggcgaacat
     1381 ggcaatcacg ccagcggctt tcgccgaaac aattactggc aggatacccc aaacatcgac
     1441 gaagttgtcg ggcaccgctc ttaagatcgc gtaaaacggc aggaaatacc attccggtac
     1501 gatatgcggc ggcgttacca gcggattggc ttcgatgtag ttgtccggct caccaaagaa
     1561 attcggtgca aagaatgtaa agcctaagaa gaaaattagg aatacgccaa aaccgtatgc
     1621 atccttcgcc gtataatagg gatggaacgg aatttcatct ttatcgccct gaacttcgat
     1681 acccaagggg ttactggatt tatgcgtgtg cagcgcccac aaatggacga acaccaaagc
     1741 aaaaattaca aacggcatga gataatgcaa tgagtagaat ttattcaaag tcggattgtc
     1801 gatcgagaag ccaccccaca gccattgcac gatggactca ccaaagaacg gaatgatcga
     1861 gaataaattg gtaataacgg tcgcgcccca aaagctcatt tggccccacg gcagcacata
     1921 gcccagaaaa gccgcggaca tcatggcgaa gaagataaaa attccgatga tccacagcaa
     1981 ttcacgcggt tctttgtaag agccgtaata catgccgcgg aaaatgtgga tgtagacgca
     2041 gataaagaac attgagccgc cgttcgaatg gagatagcgg atcaaccagc cgtaattgac
     2101 gtcccgcatg atacgctcaa ccgagtcaaa ggccatggac gtatggggag tgtagttcat
     2161 cgccagaata ataccggtgc cgatcaaaac aaccagaatt acgccggcga gtgaaccgaa
     2221 attccaccag taattcagat tacgcggcgt cggatattcg acaatcgcat gatcaagaaa
     2281 agtgaacacc ggcaagcggt gatcaaccca tttaatgatt ggatttttcc aggttcgtga
     2341 gctcatgatt tccctcccta acctattaat atatttgtgt catcgacgaa tttatacggc
     2401 ggtatcgcca aattctccgg tgccggacct ttgcgaatgc gtccggaagt atcgtaatgt
     2461 gagccatggc acgggcagaa ccagccacca aactcgcctt tggtatcacc acttttttgg
     2521 cccatcggaa tacagccgag atgggtgcaa ataccgatca tcaccagcca ctcgcttttc
     2581 ttgacccggt ctttatcagc ttcagggtcg atcagaccta tcaattcggt ggcctgggct
     2641 gcttcgattt ccttggccgt ccggcgacgc acaaaaaccg gcttaccacg ccaaatagta
     2701 gttatgcttt ggcctacctc gactgacgaa atatcaagct cggttgaggc caaagccaac
     2761 acgtctttcg acggattcat ggtatcaatg aagggccatg cggccataac cgtgccggca
     2821 gcaccgacag ctatggtaga atataataga aagtcacgtt tggtatcgtc atgcgactca
     2881 tctgacgatc cgtgtccagc gctttccgcg gtagaagctg tatcaaccat gcctattttc
     2941 tctttcacac cggttaattc cggatgctca gtcctttgca aaagtcatta acgcataaat
     3001 ggggattatt ttttgaattc acagtgtcca ggcctttgaa tgcagtaaga tataaagcaa
     3061 aatacgttac tagaaaagga aaaataacta gcaaaacgtt taattattgg ggaaaaacct
     3121 tctaattttg ttggctttcg actcct
//
LOCUS       DASCNL010000003         1309 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000008092, whole genome shotgun sequence.
ACCESSION   DASCNL010000003 DASCNL010000000
VERSION     DASCNL010000003.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000008092"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            163..798
                     /gene="plsY"
                     /locus_tag="QF359_00035"
     CDS             163..798
                     /gene="plsY"
                     /locus_tag="QF359_00035"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HJO85325.1"
                     /translation="MPENAVDLVSKVHLIVALFGYLLGSIPFGLVLTRLVGLGDIRNI
                     GSGNVGTTNVLRTGNKPLALLTLLLDAGKGGIAALISYHLYPGGPNGFDFAIVAGLAA
                     VIGHNFPVWLKFKGGKGVATTLGTLLAISWQIGLATCVTWVVIAALFRYSSLAALVAL
                     AAAPLYAGLMGFEKVTVSAALLAILAFVRHHENIRRLLKGEESKIDRKKSE"
     gene            883..>1309
                     /locus_tag="QF359_00040"
     CDS             883..>1309
                     /locus_tag="QF359_00040"
                     /inference="COORDINATES: protein motif:HMM:NF014533.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HJO85326.1"
                     /translation="MSDQTQIISNEQRHDWLHLIRSDRVGPIIFYKLLKQFCTDTQAK
                     IEQITAAGAILVTRGESDYPPLLARIEDAPPLLFVIEHLHLLRKKAVGIIGTRNASLN
                     GHRIAASFTGTFGEVGYLVSSGMARGIDRSAHEGALNTST"
BASE COUNT          303 a          346 c          321 g          339 t
ORIGIN      
        1 accttatgct gtttgaccct gagcacggct ggcaggtcaa agatactgat ctcgtgagta
       61 aagcaaaaaa cacaccattt gatctgcgcc cagtacaggg tgtcgtgctc cgcacggtca
      121 tcgacggccg cactgtctat tgcctggaag attattaagt aaatgccgga aaacgccgtt
      181 gatctcgtct caaaggtgca tctgatcgtc gcgctattcg gctatctgct aggatctatt
      241 ccttttggat tggtcttaac ccgtttggtg ggtctcggtg acattcggaa tattggttcc
      301 ggcaatgtcg gcaccaccaa tgtactgcga accggtaata agccgttggc gcttttgaca
      361 ttattattag atgccggtaa aggcgggatt gctgcgctga tttcctatca tttatatccg
      421 ggcggtccga acgggtttga ttttgccatc gtcgccggtc tcgccgcggt catcggtcac
      481 aactttccgg tttggcttaa atttaaaggt ggtaaaggcg ttgccacgac gctcggcacg
      541 ttattagcaa tttcgtggca aatcggcctc gccacttgcg ttacctgggt cgtgatagcc
      601 gcattattcc gttattcatc gctggcagca cttgtggcct tggcagccgc cccgttgtat
      661 gcagggctta tgggctttga aaaagttacc gtctccgccg cgctcctcgc catcctcgcc
      721 tttgtccgcc accacgagaa tattcgccgt ctgctcaaag gcgaagaaag caagatcgac
      781 cgaaaaaaaa gtgaataaaa ttaaagcctt ccactaaaac cgcctctggc cccgtcatat
      841 caccctatat agcaccgtgg gtttgtagag ggacactttt atatgagcga tcaaacacaa
      901 ataatatcga atgaacaacg acacgactgg ctacatttga taagaagtga ccgagttgga
      961 ccaatcattt tttacaagct gctgaaacag ttctgtacgg atacccaggc caaaattgag
     1021 caaatcaccg ctgccggagc gatactcgtt acccgcggcg aaagtgatta cccgcccctg
     1081 ctggcccgta tcgaagatgc tccaccttta ttatttgtca tcgaacatct ccatctgctg
     1141 cgtaaaaaag ccgtcggcat tatcggcacg cgtaacgctt cgctcaatgg acatcggatt
     1201 gcagcgtcgt tcaccggcac ctttggtgaa gttggctatc ttgtttcctc cggcatggcg
     1261 cgcggtattg accgctcggc tcacgaaggt gcgcttaaca ctagcacgg
//
LOCUS       DASCNL010000004         1408 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000010828, whole genome shotgun sequence.
ACCESSION   DASCNL010000004 DASCNL010000000
VERSION     DASCNL010000004.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1408)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1408)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1408
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000010828"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(2..547)
                     /locus_tag="QF359_00045"
     CDS             complement(2..547)
                     /locus_tag="QF359_00045"
                     /inference="COORDINATES: protein motif:HMM:NF013866.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJO85327.1"
                     /translation="MISLDVDGANMPAMVCGPEGDEPHPALVVAMHMPVHAGLEGTQF
                     TENMIQLFADSGYLCVVPFIFQRFPLKKDRQEKRASFGDKEIHADQETAYQWLISNEN
                     VDSDSIGIYSNDDGNPSPEDADAEEQALIAAGIEYEFHRYDGAGHAFMNPTSSRDPDP
                     YRYQASEDSRNKQLAFLARHL"
     gene            649..1260
                     /locus_tag="QF359_00050"
     CDS             649..1260
                     /locus_tag="QF359_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HJO85328.1"
                     /translation="MSIDFFITSLIVVVIPGTGVIYTLSHGLFRGPLASVVAAFGCTL
                     GILPHIAASLLGIAALLHTSAVLFQTFKFVGVAYLFYLAWGIWKDSGSLQINRPEGAQ
                     NLTRVCISGFLINILNPKLSIFFLAFLPQFVPAEEANPLTLMIAMSAIFMAMTLSIFI
                     LYGLAAAKVSTYVTSSPQATKWLQRSFAGAFATFGLKLALTDN"
BASE COUNT          338 a          337 c          327 g          406 t
ORIGIN      
        1 actaaagatg tctcgccaga aacgccagtt gcttgttccg ggaatcctcc gaggcttggt
       61 agcggtaagg atcaggatcg cggctggaag tcgggttcat aaatgcgtgc cccgcgccat
      121 catagcgatg gaactcatac tcaatgccag cagcgataag cgcctgctcc tcggcatcag
      181 catcctcggg tgatggattg ccatcatcat tgctatagat accaatgcta tcactgtcga
      241 cgttttcgtt ggagatcagc cattggtagg cggtttcctg atcggcatga atttctttgt
      301 caccaaagct cgcacgcttt tcctggcggt ccttcttcag cggaaaacgt tgaaatatga
      361 aaggcacaac acaaagatag ccgctatcgg caaagagttg gatcatgttc tcagtgaatt
      421 gggtgccttc gagcccggca tggaccggca tatgcatggc aaccaccagc gccggatgcg
      481 gctcgtcacc ttccggacca cacaccatcg ccggcatatt tgcgccatcg acgtctaatg
      541 aaatcatgtc atacatgttg cttcccattt agatttatta attgacgaat aatttagcgc
      601 aaaaatgcct ttgatgtact taggaattta agttgttata ctgaacacat gagcattgat
      661 ttctttatca cctcgctgat tgttgtcgtc atacctggca ccggcgttat ttataccctg
      721 tcgcacggat tgttccgggg accgctggcg agcgtggttg cggcgtttgg ctgtaccctc
      781 ggcatcttgc cccatattgc ggccagtctt ttaggtatcg ctgccctttt acatacaagc
      841 gccgtgttgt ttcagacctt taagtttgtc ggcgtggcgt atctgtttta cctcgcctgg
      901 ggaatttgga aagacagcgg cagcttgcaa atcaaccggc ccgagggggc gcaaaactta
      961 acccgggtct gcatcagcgg ctttctgatc aatattctta atcccaaact gtcgattttt
     1021 tttctcgcct ttttaccgca gtttgtacca gcggaagaag ccaacccatt gacgctgatg
     1081 atcgccatga gcgcgatttt tatggcaatg acgctcagta tttttattct ttatggctta
     1141 gcggcagcca aagtcagtac ctatgtgaca tcttcgccgc aggcgaccaa atggctgcaa
     1201 cgcagcttcg ccggcgcctt cgctaccttt gggctgaaat tggcgctgac ggataattaa
     1261 taataagggg acatgtactt gttacacgtt ggagtaatat ttataaacca taataatatg
     1321 tttattaaca gatagttata aaattttatt tggcttattt ttatttcata aattatattt
     1381 agtaacgaaa ttagtaacat aatccata
//
LOCUS       DASCNL010000005         5282 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000011086, whole genome shotgun sequence.
ACCESSION   DASCNL010000005 DASCNL010000000
VERSION     DASCNL010000005.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5282)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5282)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5282
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000011086"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            185..322
                     /locus_tag="QF359_00055"
     CDS             185..322
                     /locus_tag="QF359_00055"
                     /inference="COORDINATES: protein motif:HMM:NF019540.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HJO85329.1"
                     /translation="MAQKGSRKQLKHKTKPGRITLSHPKRDIPIGTLRSIEWLAKIKL
                     R"
     gene            326..706
                     /locus_tag="QF359_00060"
     CDS             326..706
                     /locus_tag="QF359_00060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003628643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HJO85330.1"
                     /translation="MDYIALLRKETDTDYGVDFPDLPGCITAGSTLDEAKEIAAEAIA
                     FHIEGLIEDGEDIPAPSSLEEIMADKANKEAVAFLVPYQSSEKAVRVNITLPSSLLKR
                     IDRQSGKRGRSGFLAAAAEKELTK"
     gene            complement(742..1563)
                     /gene="tatC"
                     /locus_tag="QF359_00065"
     CDS             complement(742..1563)
                     /gene="tatC"
                     /locus_tag="QF359_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HJO85331.1"
                     /translation="MSDSVEENTSPLMDHIIELRNRLMYSVIAIFVVFVGAYTFAEQI
                     YAFLVQPLADIMTKTGQNRRLIYTALHEAFFTYIKVSFWAAIFVSFPFIAMQFWKFVA
                     PGLYKNEKMALAPYLVLSPILFFAGGALVYYFIFPLAWKFFLSFESAGLGGGLPIQLE
                     AKVNEYLSLVMRLIFAFGISFQLPIILTLLARAGIVTSVGLAAKRKYALVMVFIAAAV
                     LTPPDIISQIGLAIPIIILYEISIIAVRTVEKKKAEAEVDDEEEEIIEETDFNVT"
     gene            complement(1560..2048)
                     /gene="tatB"
                     /locus_tag="QF359_00070"
     CDS             complement(1560..2048)
                     /gene="tatB"
                     /locus_tag="QF359_00070"
                     /inference="COORDINATES: protein motif:HMM:TIGR01410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HJO85332.1"
                     /translation="MFDIGWTEITIILIVAIIVIGPKDLPRVLRTVGQWVGKAKAMTR
                     EFRGHVDDMIRDTELDEVKKQIESAGSFDANDALEKAIDGDGEIKNAFDFSGDEFANP
                     TDLDDPSYDEDTDDDPDGTAMLDDNDGVKQLPDNLPEGITELEQEEESAAVEVQPKEY
                     KT"
     gene            complement(2118..2348)
                     /gene="tatA"
                     /locus_tag="QF359_00075"
     CDS             complement(2118..2348)
                     /gene="tatA"
                     /locus_tag="QF359_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HJO85333.1"
                     /translation="MGIGVWQVVLVLVIVLIIFGAGKLPKVMGDVAKGVKNFKSGMAE
                     EVTDSKKESAPAENNTAQVSESAENKEDSVKS"
     gene            complement(2660..2980)
                     /locus_tag="QF359_00080"
     CDS             complement(2660..2980)
                     /locus_tag="QF359_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HJO85334.1"
                     /translation="MNIQETIERKLVDAIPLLGLEVINESYMHNVPTGSESHFKVVII
                     SDEFEGERLVKRHQRVNKVLAEELADSVHALAIQTLTPDEWKEKGRAVLPSPECLGGG
                     KSDS"
     gene            complement(3629..4309)
                     /gene="scpB"
                     /locus_tag="QF359_00085"
     CDS             complement(3629..4309)
                     /gene="scpB"
                     /locus_tag="QF359_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HJO85335.1"
                     /translation="MNSVDRHHLKLLEAFLFASAEPVPLKVLEERLPDGAEIEALIEE
                     LKNHYGECGINLVQIGKGWAFRTDPGLAQALLVDRTITRKLSRAAVETLAIIAYHQPV
                     TRAEIEEIRGVGLSKGTMDVLFEAGWIRPRGRRRTPGKPVTWGTTEGFLDHFAMKSLE
                     DLPGMEELKAAGLIDKRPAIQTLGTRANMAPKADPDELEEKPEQGVMNEDPLDPDDGA
                     DLASLEAE"
     gene            complement(4316..5152)
                     /locus_tag="QF359_00090"
     CDS             complement(4316..5152)
                     /locus_tag="QF359_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HJO85336.1"
                     /translation="MNDDINDSVDDFENEEHIIAVPGTELVLDVGGFEGPIDVLLTLA
                     RDQKVDLTQISILELADQYLLWVAEIRRTNLELAADYLVMAAWLAYLKSRLLIPDIST
                     EEEPSGEEMAAALQFQLRRLEGMQDAGARLMARHQLGKDFFKRADPEKFGYNSTSIFE
                     VTMFDLLSAYGEHTHRSNVKILHIQGSDLFSQGDVIKRLMRIIGKIPDWAALDQFLPI
                     ELRGDIISRSALASTFAAVLQMTKEGKMQMRQGGSFEPIFIKDAAHRPEKLDKSNDAN
                     RD"
BASE COUNT         1442 a         1296 c         1169 g         1375 t
ORIGIN      
        1 tccgagtgtg taattgaatt tgaaacttat agggcgcacg ggtcatgaga acaagtgtgg
       61 tgatgggagt acaatttata cacatagatg tgtatttttg ttgaatatgg acaattagtg
      121 tgtataatac acatatgaat agtagagagc ttttaaagcg ctcaaatcag acggctggtt
      181 tgaagtggcg caaaaaggtt ctcgcaaaca actcaaacac aaaactaagc cgggacggat
      241 aaccttgtcg catcccaaaa gggacatccc aataggtacg ttgcgttcca ttgaatggct
      301 agcaaagatt aagttgaggt gatctatgga ttatattgct ctgttaagaa aagaaactga
      361 taccgattac ggggtggatt ttcccgattt gccgggctgt atcaccgctg gctccacctt
      421 ggatgaagcc aaagaaatag cggcggaagc tatcgccttt catattgaag gcttaatcga
      481 agatggtgaa gatattcccg ctccatcatc gctagaagaa atcatggcgg ataaagccaa
      541 taaagaagct gtagcttttc tagtacccta tcaaagtagc gaaaaggccg tgcgggtaaa
      601 cattacccta ccgtcttctt tattgaaacg tatcgatagg caatccggca agcgcggcag
      661 atctggattt ttagcggccg ctgctgaaaa agagttaact aaataaatat tttccgggac
      721 gctttgtttc cgttaacaat cttaagttac attaaaatct gtttcttcga tgatttcttc
      781 ttcctcatca tccacttcgg cctctgcttt tttcttttca acggtgcgga cggcgatgat
      841 cgatatctcg tagagaataa tgatcggaat tgcgaggccg atctggctga tgatatccgg
      901 tggggtcagc acggcagcag caataaacac catcaccaac gcgtatttac gtttggcggc
      961 aagcccaacc gaagtcacga tccctgcccg cgccagtaat gttaaaatga tcggcagttg
     1021 aaagctgatg ccaaaagcga agatcagtcg catcaccagc gacaaatact cgttaacctt
     1081 ggcttccagt tggatcggca gaccgccgcc caaaccggct gattcaaagc tcaggaaaaa
     1141 cttccaggcc aagggaaaaa taaaataata gaccaacgcg ccgccggcga agaacaggat
     1201 cggtgacagc accagatagg gcgccaacgc cattttctca tttttgtaga ggccgggcgc
     1261 aacaaacttc caaaactgca tggcgatgaa cgggaaggag acaaatatcg ccgcccagaa
     1321 cgacacttta atataagtga aaaaggcctc atgcagcgcg gtgtaaataa gccgccggtt
     1381 ttgcccggtt ttggtcatga tatcggccag cggctggacc aaaaaggcgt agatctgttc
     1441 agcaaaagta taggcgccaa caaacacgac aaagatagcg atcaccgaat acatcaggcg
     1501 attgcgaagc tcgatgatat gatccatcaa cggcgaggta ttttcttcga ctgaatcact
     1561 cacgttttat attccttggg ctgaacttca actgcggcgg attcttcttc ctgctccagc
     1621 tcagttatgc cttccggcag attatctggt agttgtttaa ctccatcgtt atcatccagc
     1681 atagcggtgc cgtcgggatc atcgtcggta tcttcatcat aggatggatc gtctaaatca
     1741 gtgggattgg caaattcgtc gccactaaaa tcgaaggcgt ttttaatctc accatctcca
     1801 tcgatggctt tttcaagggc gtcattggca tcgaacgagc cggccgactc gatttgtttt
     1861 ttaacctcat cgagctcggt gtcccggatc atgtcgtcaa catggccgcg aaattcgcgc
     1921 gtcatcgcct tggctttacc aacccattgg ccgaccgttc tgagaacccg cggaagatcc
     1981 ttagggccaa taacaattat cgccacgatt aatatgatgg tgatctcggt ccaaccgata
     2041 tcaaacattt aagctaccgt acttgatgtg aaagctcgtt tatctgaccg aacatgcggc
     2101 ctactgaacg acaaagatca gctttttact gaatcttctt tgttttctgc ggattctgaa
     2161 acctgtgcag tattattttc cgcaggcgcc gattcttttt tagaatcagt gacttcctcc
     2221 gccatcccag atttgaaatt cttaacgcct ttagcaacat cacccattac tttgggcaat
     2281 ttaccggcgc caaaaataat caaaacaatc accaagacaa ggacaacctg ccaaactccg
     2341 atccccattt tacaaactcc tactcttcat aaattcaagg gagcggataa tggcagactc
     2401 gaaggcatag agcaatgatg gcgtattgga agattctccc gatcagcgtt attcaatttt
     2461 gcctaacttg agatacataa tggaacgact ccattttcag aatgaaaaag gccaaacaag
     2521 gactctgtgc gacggttttt ctttcgatca cctcggtaat taagataaaa gatggaaatg
     2581 ataaaatcac ccactacaac gccagttgta ttgttaaaag cgatcgtgtc gcacgatctt
     2641 ttttacaacc ggtagatggc tagctatcgc ttttgccgcc accgaggcac tctggtgacg
     2701 gcaaaacggc cctgcccttc tctttccatt catcaggcgt taatgtctgg atcgccaacg
     2761 cgtgcactga atcggctaat tcctcggcca acactttgtt tacgcgctga tggcgcttga
     2821 ccagacgctc gccttcaaac tcatcggaaa tgataaccac tttgaaatga gactctgaac
     2881 ccgtcggcac attatgcatg tagctttcat tgatgacttc caatcccaat aacgggatcg
     2941 catcaactaa ttttcgctcg atcgtttctt gtatattcat taactatacc aatatgaaaa
     3001 actgttaaat taaaatgctg aaaacggtat atcaatatta tgcgaaaagc tgctccgaat
     3061 cctaattcta tcatagaatt agaatgttaa gatttcaatc gagctaattt aaaagttata
     3121 ctcgaatatg caaattcatt caaaatatca gatttttcct gacttaaatt tggtctttgt
     3181 tcaacgcagt gggtaattct cctttggcgc gatgcaatca atattcaaag atatatatca
     3241 atattcaaag atatattaag tgacccggat tttaacactg gaatgaactt tttagtcgat
     3301 tcgcagaaag ttgattacag tagtgccaac tatgcagcat tttccgttca acaggaggta
     3361 tggtcctcaa ctcacaataa attaggcccc tgtaaaatgg catttcttca acaagacgcc
     3421 acaaattatg gtatcagccg tcaagcttcc agtatgtttt ctccgataca gttgaacgcc
     3481 aaccgtttcg aaatctttgt gaggcctgtt cagcgagagc cggcagattg cctgctgcca
     3541 gttaagagcc tagcgaaaat tccacgaact tttcgacgaa gtcctgtccc cacaccgtga
     3601 caaagacgtc gtagcgcatg aagttaccct actcggcttc aagcgatgcg aggtcggccc
     3661 catcatccgg gtcaagcggg tcttcgttca tgactccttg ctcgggcttt tcttcgagct
     3721 catcaggatc ggctttaggc gccatattgg cccgggttcc gagcgtctgg atagccggac
     3781 gtttatcaat caagccggcg gccttaagct cttccatacc cggcaggtct tccaaacttt
     3841 tcatcgcaaa gtgatcgagg aaaccttcgg ttgtgcccca ggtaacaggt ttaccgggtg
     3901 tgcgacggcg gccccgcggc ctgatccagc cggcttcaaa caagacatcc atcgtgccct
     3961 tgctcaatcc gacaccccgg atttcttcga tctcagcccg ggtaacaggt tgatggtagg
     4021 caataatcgc caatgtttcg acggcagcac gcgacagctt gcgggtgatt gtccgatcca
     4081 ccagcaaggc ttgagcaagg ccggggtcgg tccggaaggc ccagccttta ccaatttgga
     4141 caagattgat gccgcactcc ccgtaatggt ttttgagttc ctcgatcaga gcttcgatct
     4201 cggcgccatc cggcagccgt tcttccagca cttttaatgg caccggttcc gctgaggcaa
     4261 ataaaaacgc ctccagcaat ttcaggtgat gtctgtccac actattcatc gtcaattagt
     4321 ctcgatttgc gtcattagat ttatcaagtt tctccggcct gtgcgcggcg tctttaataa
     4381 aaattggctc gaacgagccg ccttgccgca tttgcatctt accttctttg gtcatttgca
     4441 gaacagcggc aaaggtcgaa gcgagcgctg agcgagagat aatatcgccg cgtaactcga
     4501 tcggcaggaa ttggtccaat gccgcccaat ccggaatttt gccgattatc ctcatcaaac
     4561 gtttaattac atcaccctgc gaaaacagat cagagccctg gatatgaagt atttttacat
     4621 tggagcgatg ggtatgctca ccgtaagcgc tcaacagatc aaacatcgtc acttcaaaga
     4681 tcgaagttga gttgtagcca aatttttccg gatcggcccg tttgaaaaaa tccttaccta
     4741 attgatggcg agccattaag cgcgcaccgg catcctgcat tccttcaagg cggcgcaatt
     4801 gaaattggag tgcggccgcc atttcctcgc cgcttggctc ttcttcggtg gatatatcgg
     4861 gaattagcaa tcttgatttc agataagcca gccaggcagc catcaccaaa taatcggcgg
     4921 ccaattccag attggtgcgg cggatttcgg ccacccagag caaatactgg tcggctaatt
     4981 caaggatgga gatttgtgtc agatcaacct tttgatcgcg cgccagagtc agcaaaacgt
     5041 caattggccc ttcaaagcca ccaacatcca acactagctc ggtaccgggc accgcaataa
     5101 tatgttcctc gttttcaaaa tcatcgacgc tatcgttgat gtcgtcattc atgattagtt
     5161 aaaagcccac catatggatt atgaaacccg ctaattcaaa agctgggatg ccaacgatcc
     5221 acataaaaat attgagatcg acaccgacat agttccccaa ccagggtaga aaaaataatg
     5281 ct
//
LOCUS       DASCNL010000006         1142 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000013341, whole genome shotgun sequence.
ACCESSION   DASCNL010000006 DASCNL010000000
VERSION     DASCNL010000006.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000013341"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1111)
                     /locus_tag="QF359_00095"
     CDS             complement(<1..1111)
                     /locus_tag="QF359_00095"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HJO85337.1"
                     /translation="MVPTATDIRIGSHADKTRFVIDISDDIKFKIFTLSDPYRVVIDL
                     PEIGWRLPGNVMARTTGVIDKFRYGLFRTGLSRVVLDVKKPVKIKAVFMLPPAKGKRY
                     RLVLDLASTTRAQYLAALRPPTSNPRYLRDPGQIPEASSGILPPGRKPQKTAIEKRVI
                     VIDPGHGGIDPGSTSGRIFEKHITLATARAIKTHLETNGNYKVRLTRKKDSFIRLRRR
                     IAIARAHQAELFISLHADAIRNKRIRGLSVYTLSEKASDKEAAELAEKENKADLIAGM
                     DLSTESKEVTNILIDLAQRETMNESARFAAELVKHIRKVTKTLTNAHRFAGFAVLKAP
                     DVPSILIEMGFLSNRADEQALRSKKYRTNLARAIGS"
BASE COUNT          258 a          292 c          287 g          305 t
ORIGIN      
        1 cactgccaat cgcacgggct aaattggtgc ggtatttttt actgcgcagc gcttgttcat
       61 cggctcggtt ggacagaaaa cccatctcaa taaggattga tggcacgtcc ggagctttca
      121 gcacagcaaa gccggcaaac cggtgcgcat tggtcagggt tttggttact ttgcggatat
      181 gcttgaccaa ttcagcggca aagcgcgccg attcgttcat ggtttcacgc tgcgcgagat
      241 cgatcaggat attggtaacc tctttggatt cggtggataa atccatgcca gcgatgaggt
      301 cggctttgtt ttccttttcc gccagttccg ccgcctcctt atccgacgct ttttcggaca
      361 gcgtatagac cgataggccc cgaatgcgtt tgtttctaat tgcgtccgcg tgcagcgaga
      421 taaacaattc ggcctgatga gcgcgtgcta ttgcgatgcg ccgtcgcaac cggatgaaac
      481 tatccttttt ccgggtaagc cgaactttat aatttccatt cgtttccaga tgggttttaa
      541 ttgccctcgc cgtagcgagc gttatatgct tttcaaaaat ccgtccactt gttgaccccg
      601 gatcaatgcc gccatgtccg ggatcgatta caatcacacg tttctcaatg gcagtttttt
      661 gcggttttcg ccccggcggc agaataccgg atgaagcttc tggaatttgt ccgggatcac
      721 gcaaatatct tgggtttgac gttggcggcc taagggccgc caaatattgc gcccgcgtcg
      781 ttgatgccag atcgagaacc aagcgatagc gcttgccttt agctggcggt agcataaata
      841 ccgctttaat tttcactggt tttttaacgt ccagcacaac ccgcgacaag ccggtgcgaa
      901 ataggccgta gcgaaactta tcgataacgc cggttgtgcg tgccatgaca ttgccgggca
      961 ggcgccaccc aatttcgggg agatcaatca ccacacgata aggatcagac agcgtaaaga
     1021 tcttaaattt aatatcgtcc gagatatcaa tgacaaaccg ggttttgtca gcgtgcgaac
     1081 caattctgat atcggttgca gtgggaacca ctgcatttgc ctgacttatc cctaaactta
     1141 gc
//
LOCUS       DASCNL010000007         1162 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000014030, whole genome shotgun sequence.
ACCESSION   DASCNL010000007 DASCNL010000000
VERSION     DASCNL010000007.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000014030"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="QF359_00100"
     CDS             complement(<1..555)
                     /locus_tag="QF359_00100"
                     /inference="COORDINATES: protein motif:HMM:NF012382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO85338.1"
                     /translation="MDKEVNAPQHIRPNFQNIPFWNPTKILDHEIGKHVHRMDLNECP
                     YPPSPKVIEAMQNVADTLNRYPDGTCPELTPLIAERTGVPTGNITWGGGSTQLLTSIA
                     EISVAPGQNLVAPNLVWKRFDGVFKIVDARVTSVPNNADGSIDVEALTNAIGNDTRLL
                     VCVTPNNPTGMMLNEDEIRHVSKNT"
     gene            complement(576..>1162)
                     /locus_tag="QF359_00105"
     CDS             complement(576..>1162)
                     /locus_tag="QF359_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HJO85339.1"
                     /translation="LEEHQQGTIVVDGVELTDDLKHIDHIRSEVGMVFQSFNLFPHMT
                     VLDNLVIGQYLVRRMPKMEAEEVAMTYLERVKITDQAGKYPGQLSGGQQQRVAIARSL
                     CMKPKIMLFDEVTSALDPEMVKEVLDVMIDLAREGMTMLVVTHEMGFARTVADRVIFM
                     DEGQIIEENTPDAFFDNPSSERAQIFIGQVLHHL"
BASE COUNT          273 a          288 c          287 g          314 t
ORIGIN      
        1 tgtgttttta ctaacgtgac ggatttcgtc ttcattgagc atcatgccgg tcgggttgtt
       61 gggggttacg caaaccagca accgcgtatc attgccgatg gcattggtca gtgcttcgac
      121 atcaatgctg ccatccgcat tgttcggcac tgaagtaacc ctggcatcaa cgattttgaa
      181 aacaccatca aagcgtttcc acactaaatt aggagcgacc aggttctggc ccggggccac
      241 tgaaatttcg gcaatacttg ttaacaactg tgtgctgccg ccaccccagg tgatgtttcc
      301 agtcggcacg cctgtccgct cggcgattaa aggtgtaagc tcagggcatg tgccgtcggg
      361 ataacggtta agcgtatcgg caacattttg catcgcctcg atcacttttg gcgacggcgg
      421 atacggacac tcgttcaaat ccatccggtg gacatgtttg ccgatctcgt gatcaagaat
      481 cttggttggg ttccaaaacg ggatgttttg aaaattaggc ctgatatgct ggggcgcatt
      541 tacttcttta tccatgatcc aatccgtaat tagtcttaaa ggtgatgcaa aacctggccg
      601 ataaagatct gagcgcgctc tgaagacggg ttgtcaaaaa atgcatcggg ggtgttttcc
      661 tctattattt gcccttcgtc cataaaaatt acgcgatcag cgaccgtacg ggcaaatccc
      721 atttcatggg tgaccaccag catggtcatg ccttcccggg cgagatcaat catgacgtcc
      781 aaaacttctt tcaccatttc cggatcaagc gctgaggtga cttcatcaaa cagcatgatt
      841 tttggcttca tgcagaggga ccgggcgatg gcaacgcgct gttgctggcc acctgataac
      901 tgtccgggat acttgccggc ctgatcggta attttaacgc gctccaaata ggtcatagca
      961 acttcttcgg cttccatttt tggcatacgt cttacgaggt attgcccgat caccagatta
     1021 tcgagcactg tcatatgcgg gaacaggtta aaggactgaa agaccattcc aacttctgag
     1081 cggatgtgat caatgtgttt gagatcgtct gtaagttcta caccatcgac aacaatcgtg
     1141 ccctgttggt gttcttcgag cc
//
LOCUS       DASCNL010000008         1115 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000015080, whole genome shotgun sequence.
ACCESSION   DASCNL010000008 DASCNL010000000
VERSION     DASCNL010000008.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000015080"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="QF359_00110"
     CDS             <1..503
                     /locus_tag="QF359_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJO85340.1"
                     /translation="QRDLLPLIEGTTVTTKYGTIKTDHILFIASGAFHLAKPADLLPE
                     LQGRLPIRVELRALTEEDFVRILTEPEASLIKQYVALMGTEEVTLEFTDEAVQELAKL
                     AAEINSVVENIGARRLHTVMEKLLEEISFTATDRGGETVIINAELVQERVGDLVKGGD
                     LSKFIL"
     gene            737..>1115
                     /locus_tag="QF359_00115"
     CDS             737..>1115
                     /locus_tag="QF359_00115"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO85341.1"
                     /translation="MAYQDLREFMSKLEAEGRLQRVSEPVSPIFEMTEIQTRLLAEGG
                     PAVLFENVVQENGEKYSLPMLVNLFGTVERVAWGIERKPETLRELGETLAFMRQPEPP
                     GGWKEAIGMLPLVKSAMAMKPKTV"
BASE COUNT          289 a          264 c          294 g          268 t
ORIGIN      
        1 tgcagcgcga tctgctgcct ctcattgagg gtaccacagt gacgaccaaa tacggcacca
       61 ttaaaactga tcacattctg tttatcgcct cgggcgcgtt tcatctcgcc aagccggccg
      121 atcttttgcc cgaactccaa ggccgcctgc caatccgggt tgaacttagg gcgctaactg
      181 aagaagattt tgtccgcatc ctgaccgagc ccgaagctag cctgatcaaa caatatgtcg
      241 cgctgatggg caccgaggag gtaacgctgg aatttaccga tgaagccgta caagagcttg
      301 ccaaactcgc agccgaaatt aactcggtgg tggagaatat cggcgcaagg cgacttcata
      361 cggtgatgga gaaactcttg gaagagatca gcttcacagc gaccgaccgc ggcggcgaaa
      421 ctgtcattat caatgctgaa ctcgtccaag aacgcgtcgg tgatctcgtt aagggcggcg
      481 atctatcgaa gtttattttg tagggtatta aaattccgcc gttcaaatct tagaacaatt
      541 tgcggcggtt ccctaacagc tccaaaataa tgcatgtatt caattgggta tcgggggatg
      601 gctggggcgc aataatctta aacccttgac cacaatgtgg atttcctgat tttcgacgtt
      661 gataatcttt gacttgacct ccggcaccta tcccataggt ataaatggcc aataatttgg
      721 tcggaagaag aagtttatgg cttatcagga tttacgggag tttatgtcta aacttgaggc
      781 tgaagggcgc ttacagcggg tttcagagcc agtttcaccg atcttcgaaa tgaccgagat
      841 acaaacgcgc ctgttagccg aaggcggccc ggcagtgttg tttgaaaatg tagttcagga
      901 aaatggcgaa aaatacagcc tgccaatgct ggttaattta ttcggcactg tcgagcgggt
      961 ggcctggggt atagagcgga aacccgaaac tttacgggaa ctcggtgaaa cccttgcttt
     1021 catgcgtcag cccgaaccac ctggcggctg gaaagaagca attggcatgt tgccgttggt
     1081 caaatcggcg atggcgatga aaccgaaaac cgttt
//
LOCUS       DASCNL010000009         1284 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000017631, whole genome shotgun sequence.
ACCESSION   DASCNL010000009 DASCNL010000000
VERSION     DASCNL010000009.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1284)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1284)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000017631"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="QF359_00120"
     CDS             <1..677
                     /locus_tag="QF359_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HJO85342.1"
                     /translation="PHLLALSTSSPFWRGENTGLKSYRLCVFDELPRSGLPERFESYG
                     EYSRHVAVLIEAGLIKDATMLWWDVRPSATFPTLEMRVADVCTRIDDAVCLAALYLCI
                     IRMLYRLRRGNQKWRTYTNMLINENRWRAQRYGMDEGLVDFGKGSVVPFAELLEELIE
                     LIKEDAEALNCVDEVHHARRIIEAGTSAHRQLATFEKIKDISGDEQKAFQAVVDELIA
                     ETVEGF"
     gene            774..1259
                     /locus_tag="QF359_00125"
     CDS             774..1259
                     /locus_tag="QF359_00125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85343.1"
                     /translation="MANTTYGLEIVGLFAKKDELEKAVADLLTAGFERSDLSLLSSHD
                     SLEILERGGSTWQNTVAALVGEYKILGPLAASGGIFLAGGPVAGAIAGVIGAAVSGLA
                     AKEVLEEVLAVPEAEDFVRALDAGSVILWVRAEDDEMQEKARQNLAVNNAHNIHQVEP
                     E"
BASE COUNT          296 a          306 c          363 g          319 t
ORIGIN      
        1 tgccacatct cttagctctt tcaacgtcat cacccttttg gcggggcgaa aataccgggc
       61 ttaaatccta tcgtctctgt gtgtttgatg aattgccgcg ctccggtctg ccagaacgct
      121 ttgaatctta cggcgaatac agccgccatg tcgccgtgct gatcgaagcc ggcttgatca
      181 aggatgccac tatgctgtgg tgggatgtcc ggccgagcgc gacttttcca acccttgaga
      241 tgcgtgtcgc tgatgtctgc acgcggatcg atgatgcggt ttgtctggcg gcgctctatt
      301 tgtgtatcat ccgcatgctc tatcggctgc ggcgcggcaa tcaaaaatgg cgcacttaca
      361 ccaatatgct gattaacgaa aaccgctggc gggcacagcg ttacggcatg gatgaaggct
      421 tggtcgattt cggcaaaggc agtgttgtgc cgtttgctga actgctggag gaactcatcg
      481 agctgattaa agaagatgct gaagcgctga attgcgttga cgaagttcat cacgcccgcc
      541 ggattattga agctggcacc agtgcccatc ggcaattggc aacctttgaa aaaatcaaag
      601 acatttcagg tgacgagcaa aaagccttcc aagccgtggt cgatgaactc atcgctgaga
      661 cggttgaagg tttttgatcg tggcggtaaa tttttttgat atgacaatca tcaatgatct
      721 caaatgattt ctgcattata ataagtgtgt aaattcaggc aggaggatga gtgatggcaa
      781 acacgacata cgggctggaa atcgtcggcc tcttcgccaa aaaggatgaa ctggaaaaag
      841 ccgtcgctga tttattgacg gccgggtttg agcgctctga tctcagcctg ctaagctcgc
      901 atgattctct tgaaattctg gaacgcggtg gatcgacctg gcagaacacg gttgcggcct
      961 tggtcggtga atacaaaatc ctaggccctt tggcggcttc gggaggtatt tttctggctg
     1021 gtgggcctgt tgcgggcgct attgctgggg tcatcggcgc cgctgtcagc ggcttggcag
     1081 cgaaagaagt cctggaggag gttctggctg tacccgaagc cgaagatttt gtccgcgccc
     1141 ttgatgccgg cagtgttatt ctgtgggtcc gtgccgaaga tgatgaaatg caggaaaaag
     1201 cccggcagaa tctagcggtc aataatgctc acaacatcca tcaggtcgag ccggaataga
     1261 agctacgtca tcccgccctc aaaa
//
LOCUS       DASCNL010000010         1435 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000021559, whole genome shotgun sequence.
ACCESSION   DASCNL010000010 DASCNL010000000
VERSION     DASCNL010000010.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1435)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1435)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000021559"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="QF359_00130"
     CDS             <1..541
                     /locus_tag="QF359_00130"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HJO85344.1"
                     /translation="QVGDTRYEIETHFDMNNVDIGASIAYSGTCLTVIEKGDNWFVAE
                     VSTETLSKTTLGDWQVDTEVNLERPLKAAAELGGHLVSGHVDGVGKITQIESEGDSIR
                     YTFCPPPELMKFIAEKGSIAINGVSLTVNEVDDTTFGVNIIPHTQSVTTFGAAKIGDP
                     VNLEIDMLARYVARLLEKD"
     gene            544..>1435
                     /gene="ribB"
                     /locus_tag="QF359_00135"
     CDS             544..>1435
                     /gene="ribB"
                     /locus_tag="QF359_00135"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HJO85345.1"
                     /translation="MATPKPERYDLSDYLSSIDEIIDEARNGRMFILVDDEDRENEGD
                     LVIPAQMATPDAVNFMAIHGRGLICLALTQQRVEELGLPAMSANNAMRHQTAFTVSIE
                     AKEGVTTGISAADRARTIATAIDTSKGAADIASPGHVFPLAARDGGSLVRAGHTEASV
                     DIARLAGLSPGGVICEIMNDDGTMARLPDLVTFAQKHNLKVATIADLMEYRLRNDRIV
                     KPGIESTMDTIGGGEFKTVVYVNQADQSEHMALVKGNVADNGPVLVRMHAFNMFDDIY
                     SAEKTLELHKAMEMIAQEGCG"
BASE COUNT          358 a          334 c          391 g          352 t
ORIGIN      
        1 tcaagtcggc gatactcgct atgaaattga aacccatttc gatatgaata atgtcgatat
       61 cggggcttcg attgcttatt caggtacttg tttgacggtg atcgaaaaag gagacaactg
      121 gtttgtcgcc gaggtctcaa cagaaacact atcgaaaacg acgcttggtg actggcaggt
      181 cgacaccgag gtcaacctcg aacggccgct taaagctgct gccgaattgg gcggccatct
      241 agtttctggt catgtcgatg gtgttggtaa aatcactcaa attgagtccg agggcgattc
      301 catccgctat acgttttgcc cgccgccgga attgatgaaa ttcattgccg agaagggctc
      361 aattgccatt aatggcgttt ccttgacggt caacgaagtc gatgacacga cttttggcgt
      421 caacatcatt ccccatacgc aaagtgtgac tacttttggc gccgcgaaaa tcggtgatcc
      481 ggtaaatctg gaaatagata tgttggcgcg ctatgttgcg cgactgcttg agaaggactg
      541 acagtggcta cacctaaacc agaaagatat gatctttcgg actacttatc atcaattgat
      601 gagatcattg atgaggcccg caatggtcgg atgtttatcc tggttgacga tgaagaccgt
      661 gaaaatgagg gagacctcgt tatccctgcg cagatggcaa cgccggatgc ggtgaatttt
      721 atggccatac atggccgcgg gctaatttgc ctggctctga cccagcagcg tgttgaagag
      781 cttggcctgc cggctatgag cgctaacaac gcgatgcgcc atcaaacagc tttcacggtt
      841 tcaattgagg ctaaagaagg ggtgactacc gggatttcag ccgctgatcg tgcgcgcacc
      901 attgcgaccg ccattgatac cagtaaaggt gcggcagata ttgcctctcc gggccatgtt
      961 tttccgttag cagcgcgcga cggcggctca ttggtgcggg ctggccatac cgaggcttcg
     1021 gtggatattg cccgtctggc cgggctttcc ccaggtggtg taatttgtga aatcatgaat
     1081 gatgacggca ccatggcgcg tctgccggac cttgtcactt ttgctcagaa acataatctg
     1141 aaagtagcga caatagccga tttaatggag taccgcctgc gcaatgaccg catcgttaag
     1201 cccggcattg aatcgacaat ggacacgatc ggtggcggtg aatttaaaac cgtggtttat
     1261 gtcaatcagg ctgatcaaag cgaacatatg gccttggtaa aaggcaatgt agctgacaat
     1321 gggccagtac tggtccgcat gcatgccttt aatatgtttg acgatattta tagcgccgaa
     1381 aaaactctcg aactccataa agcgatggaa atgatcgccc aggaagggtg cggag
//
LOCUS       DASCNL010000011         1129 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000025469, whole genome shotgun sequence.
ACCESSION   DASCNL010000011 DASCNL010000000
VERSION     DASCNL010000011.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000025469"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1129
                     /locus_tag="QF359_00140"
     CDS             <1..>1129
                     /locus_tag="QF359_00140"
                     /inference="COORDINATES: protein motif:HMM:NF013225.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJO85346.1"
                     /translation="REVERVANAGIPSEKIHSRGGLTVYDRLEYLVDEGTWNPLHTLY
                     NPTDNEEGCTGVVNGIGKIEGKWAVIIGFDNKVMAGAWIAGQAENILMVTDMAKRLNV
                     PLVWMTNCSGVKLMEQETVYAGRRSSGAPFFRHADLNQLGVPILNAIYGTNPAGGGYQ
                     GISPTILLAHEGANIAVGGAGIVGGMNPKGEVDMEGARALIEGSKNFKAKAPGRVETH
                     FDETAYFREVHETEQGVLDGIKDYMRMMPAYDPVMFQVAEPGEPKFEAMDLNLILPAN
                     QKRPYDSIQLLARLTDNSEFMEFRPDYGPEIFCGIAKIDGFPVAIVGNRQGVYPDYPA
                     YADGTYPGVGGKHYREGLIKQGEFVTLCGRDNLPMIWLQDTT"
BASE COUNT          258 a          293 c          319 g          259 t
ORIGIN      
        1 agggaggttg agcgggtcgc gaacgctggt attccgtctg aaaaaattca ctcgcgtggc
       61 ggtttgacgg tttacgaccg cctcgaatat ttggttgacg agggaacctg gaacccgctt
      121 cacacgctct acaatcccac cgacaacgaa gaaggttgca ccggtgttgt caatggtatc
      181 ggtaaaatcg aaggtaagtg ggcggtcatt atcggctttg acaacaaagt catggccggt
      241 gcctggattg ccgggcaggc tgaaaatatt ctcatggtca ccgacatggc caagcggctc
      301 aacgttccgc tggtctggat gaccaactgc agcggcgtca agctgatgga gcaggaaacg
      361 gtttacgccg gccgccggtc gagtggcgca ccatttttcc gccatgccga tctaaaccaa
      421 ttaggcgtgc cgatcctcaa cgctatttac ggcaccaatc cggcgggcgg cggttatcag
      481 ggtatcagcc caactatcct gctggctcat gaaggcgcta atatcgcggt cggtggtgcc
      541 ggtattgtcg gcggcatgaa tcccaagggt gaagtcgata tggaaggtgc ccgcgccctt
      601 atcgaaggtt ccaagaactt taaagccaaa gcgcctggcc gggtcgaaac acattttgat
      661 gaaacggctt atttccgtga agttcatgaa accgagcagg gcgtcttgga cggcattaaa
      721 gattacatgc gcatgatgcc ggcttacgat ccggtgatgt ttcaggtagc cgagccgggt
      781 gagccaaaat ttgaagccat ggatcttaac ttgatcctgc cggctaacca aaaacgcccc
      841 tacgattcaa ttcagttatt ggcgcggctt accgacaaca gtgaattcat ggaattccgt
      901 cctgattatg gacctgagat tttctgcggt atcgccaaga tcgatggttt ccccgttgcc
      961 atcgtcggca accgccaggg cgtctatccg gactatcccg cctatgctga cggcacttat
     1021 cctggcgtcg gcggcaagca ctaccgtgaa ggtctgatta agcaaggcga gttcgtcact
     1081 ttgtgcggcc gcgacaattt gccgatgatc tggttacagg ataccactg
//
LOCUS       DASCNL010000012         1396 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000033360, whole genome shotgun sequence.
ACCESSION   DASCNL010000012 DASCNL010000000
VERSION     DASCNL010000012.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000033360"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1037
                     /locus_tag="QF359_00145"
     CDS             <1..1037
                     /locus_tag="QF359_00145"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the uridylylation or deuridylylation of
                     the PII nitrogen regulatory protein; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein"
                     /protein_id="HJO85347.1"
                     /translation="MSDIAFKRDIDDPKTINDFVEVVKSVERLRLMTLLTVADIRAVG
                     PKTWNSWKSGLLRGLYQRALEVMSGDMVADNRQARIDHAKDNLRTALSSWDAQELRDF
                     ISTGYPSYWLAYDTDVHQRHAEIVHEAKAQDLNLHIDIRIDDEFEYTEITVYTPDHPG
                     IFSQIAGAVALSGASIMDAKIVTMSDGMVLDSFSILDINNQAYNHPHQLARLRSRIEE
                     TLAGKLNLDKELDKAAKSGLMKKEELFSVAPRIIVDNAASTTDTVIEVNGRDRIGFLY
                     DVTAALTALNLKITSAHITTYGEHVVDTFYVKDIFGLKINNDVKLAQIRQKLLKAVES
                     VGERKYEVAE"
BASE COUNT          359 a          340 c          337 g          360 t
ORIGIN      
        1 tgatgagcga tatcgctttc aagcgtgata ttgatgatcc caaaacaatt aatgattttg
       61 tcgaagtggt taaatcggtc gagcgcctgc gcctgatgac gttgctgaca gttgccgata
      121 tccgcgccgt cggtcccaaa acctggaatt cctggaaatc gggcttgctg cggggacttt
      181 atcagcgcgc cctggaagtt atgtccggtg atatggtcgc cgataatcgt caggccagga
      241 ttgaccatgc taaagataat ctccgtacgg ctttaagcag ttgggacgcc caggaactga
      301 gagactttat ctcaaccggc tatccgtcct actggctggc ctatgatact gatgtgcatc
      361 aacgtcatgc cgagatcgtg catgaagcga aagcccagga ccttaatttg catatcgata
      421 ttcggattga tgacgagttt gaatataccg aaattaccgt ttatacaccg gatcatccag
      481 gcatcttttc gcagatcgcc ggtgcggttg cactttccgg cgcctcgatc atggatgcca
      541 agatcgtcac catgtccgat ggtatggtac tggatagttt ttcgatcctg gatataaaca
      601 atcaggctta caatcatccg caccagttgg ctcgcctgcg ctcccgcatt gaagagacgc
      661 tggccggcaa gctgaacctc gataaagagc tcgacaaagc ggccaaaagc ggcttgatga
      721 aaaaagaaga gctgttcagc gttgcgcctc ggatcatcgt cgacaacgcc gccagcacca
      781 ctgatacggt gatcgaagta aacggccgtg accggattgg cttcttgtat gacgtgaccg
      841 cagcgctaac ggcgcttaat cttaaaatca cctcagccca tatcaccacc tatggcgaac
      901 acgtcgtcga cactttctat gtcaaagaca tctttggcct gaaaattaac aacgacgtta
      961 aacttgctca aatccggcaa aagctcttaa aagccgtcga gtcggtgggc gagagaaaat
     1021 atgaggtggc ggaataagtc cgccttaatc ctgcccaatt tatggcgata ataatacttg
     1081 aagaccggtt ccggaattcg ggaaacagaa gcgttgacaa aaaagtcgac aattgagttt
     1141 accagagaag aaccccaacg atcttagaaa aattgaacat attttggcac cggttttagt
     1201 ttaatttaag tcttttagca gtctttcctt aaccagtatg gtctagacct tttgcatggc
     1261 acttctacgc tcaatcgcga cggtcagcag ctttaccatg ttgagccgtg tcttagggtt
     1321 cattcgcgat atcctcatcg cggcgatcct gggtactggg ttgatcgctg atgccttttt
     1381 tgtttccttt aaattc
//
LOCUS       DASCNL010000013         1047 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000036541, whole genome shotgun sequence.
ACCESSION   DASCNL010000013 DASCNL010000000
VERSION     DASCNL010000013.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000036541"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1047)
                     /locus_tag="QF359_00150"
     CDS             complement(<1..>1047)
                     /locus_tag="QF359_00150"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85348.1"
                     /translation="IEGAIILPDETLAEIVAETLGNTDRLLSVGGAAGPAKNYADCRG
                     DITSLVPIPKPDREDITFVFYTSGTTGLPKGVELSHRTTEHRILWLATQAGFRHGNHN
                     KALGFMPLSHAIGFYGVFLATLGNNGTYYIQSAFNPVEAVDMIEQYGITYMFAVPQLY
                     FAMTQAPNYSPDKMKSLQTVLYGGAEIMPDLLIKIDKEWPAKIFHIYGTTEIMCPFSN
                     PDPVGEHTRLRPAFYTNLRMIKIGGGVDNIAEPGEEGELIVDASSDLIFSGYLNRPDA
                     TAEAIVDGWYHTGDVCFVREDGDYNLIGRTGDMVRSGGENIHPSEVEPHLMTHSNVTE
                     TAIIGIKDPAWGEM"
BASE COUNT          264 a          262 c          263 g          258 t
ORIGIN      
        1 ccatttcgcc ccaggccgga tctttgatgc cgataatagc ggtttcagtg acgttggagt
       61 gggtcatcag atgaggttca acttcggaag ggtgaatatt ttccccgccc gagcgcacca
      121 tatcgccggt gcgcccaatt aaattataat caccgtcctc gcggacaaag caaacatcac
      181 cagtatggta ccagccgtcg acaattgctt cggcggtcgc gtctggccgg ttgagataac
      241 cagaaaatat caggtcactg gaagcatcaa cgatcaattc tccctcttcg cccggttcag
      301 caatgttatc aacgccaccg ccaattttta tcatccgcaa attggtataa aatgccggac
      361 gtaatctcgt atgctcaccg accggatcag gatttgaaaa cggacacata atttcggtgg
      421 tgccataaat gtgaaatatt tttgctggcc attccttatc aattttgatc aaaagatcag
      481 gcatgatttc cgccccgcca tagagtacgg tttgcaggct tttcatttta tcggggctgt
      541 agttgggggc ttgggtcatt gcgaagtaca attgcggcac ggcaaacata taagtgatgc
      601 cgtactgttc gatcatgtcg acggcttcaa ccgggttaaa ggccgactgt atataatagg
      661 tgccgttatt gccaagggtg gccaaaaaca cgccgtaaaa tccgatggca tggctcaagg
      721 gcatgaaacc caaagctttg ttatgattgc cgtgacgaaa gccggcttgg gtggcgagcc
      781 ataatatgcg gtgctcggtt gtccggtggg agagctcaac ccctttgggc aggccggtcg
      841 tgcccgacgt gtaaaaaaca aaagtgatgt cttcgcgatc gggcttcgga atgggcacaa
      901 gactcgtgat atcacctcgg caatcagcat aatttttagc tggaccagcc gcacccccaa
      961 cactgagcag gcgatccgta ttacccaatg tttcagcgac aatttccgcc aaagtctcgt
     1021 caggtaaaat aatggcgcct tcgatct
//
LOCUS       DASCNL010000014         2403 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000038742, whole genome shotgun sequence.
ACCESSION   DASCNL010000014 DASCNL010000000
VERSION     DASCNL010000014.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000038742"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1706
                     /gene="recJ"
                     /locus_tag="QF359_00155"
     CDS             <1..1706
                     /gene="recJ"
                     /locus_tag="QF359_00155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HJO85349.1"
                     /translation="GDSRHALAISQQFQLPEIIGRFLDTRGITADQVEAFLDPKLTSS
                     LPDPAHLLDMDAGVARLIQALQGQEKIAVFGDYDVDGATSSALLARYFKAVGADYQIY
                     IPDRITEGYGPNILALEKLIKDGTKVVITVDCGTTAYEPLAFAKEKALDVVVVDHHVA
                     EAGLPEAIAVINPNRMDEASEHGQLAAVGVTFLLAVALNRGLREAGYFKDWQEPDLMQ
                     WLDIVALGTVADMVALTGVNRALVVQGLKVMLRRKNAGLSALADVALIDEAPSTYHLG
                     FLLGPRINAGGRVGESYLGAQLLATESAEEAFEIAQKLDAYNTERREIENQVLQEALE
                     KAEQQKAGSVVYIAGEGWHPGVIGIVASRLKERYGLPSCVLTIEDGKATGSGRSITGV
                     DLGACVIAARQAGIITDGGGHKMAAGFSLDHDRLDDFNAFLSERISKQIEEEGIVPTI
                     NIDGAVSVEGATMELVEVLQKLAPFGTGNAEPRFAFSNVRIAKSDVVGVNHVRCFLTG
                     LDSKKQLAAIAFNCVDTELGRALLRHKGLPLHIVGRLRENIWQGRSSVQLLIDDVAPA
                     S"
     gene            1684..>2403
                     /locus_tag="QF359_00160"
     CDS             1684..>2403
                     /locus_tag="QF359_00160"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO85350.1"
                     /translation="MTSPPHLSFRPMRNSPFFIVGIMCLAEVLTMLGVFTFPSLMPEF
                     IATWQLSNTEAGWIAGILLGGYAISVPVLVSLTDRIDARLVYLGGASLTAVSLFGFAY
                     LASGFWSALILRVLAGFGLAATYMPGLRVLVDRYEGAKQARALAFYTASFSLGTAVSF
                     YYSGEVGTSFGWSQAHVIAGVGAVAAAILVIMAMHPVTTQKPDVETRLLDFRPILRNR
                     EVMGYVLAYCAHSWELFAMRSW"
BASE COUNT          476 a          563 c          731 g          633 t
ORIGIN      
        1 ccggtgattc ccgccatgcc ttggctatct cacaacagtt tcagctgccg gaaataattg
       61 gccgcttttt ggacacccgc gggattaccg ccgatcaggt agaagctttc ctcgatccca
      121 aactcacgtc gtccttgcct gatccggcac atctattgga tatggatgcc ggtgtggcgc
      181 ggctgatcca ggcccttcag ggacaagaga aaatcgccgt ctttggcgac tatgatgtcg
      241 acggcgcaac ctcttcggcg ttactggcac gttatttcaa ggcggttggt gctgattatc
      301 agatttatat cccggatcgt atcaccgaag gctatgggcc caatattcta gctttggaaa
      361 aacttattaa agacggaacc aaggttgtca tcacggttga ttgcggtacg acggcctatg
      421 agccacttgc ttttgccaaa gaaaaggcgc tcgacgttgt cgtcgttgat catcatgtcg
      481 ctgaagctgg tctgccggaa gcgattgcgg tgattaatcc taatcgtatg gacgaagcaa
      541 gcgagcatgg ccagttagca gcggtcggcg tgaccttttt gctcgcggtt gccctcaacc
      601 ggggtctgcg agaggctggt tatttcaagg actggcaaga gccggacctt atgcaatggc
      661 tggatattgt tgccctcggt acagtcgctg atatggtggc gctgaccggt gttaaccggg
      721 ccctggtggt gcagggcttg aaggtgatgc taaggcgtaa aaatgccggg ctgtcggcgt
      781 tggcagacgt ggcgctgata gatgaagcgc cctcgaccta tcatttgggt tttctcttag
      841 gcccgcgcat caatgccggg gggcgtgttg gcgaatccta tttgggcgcg caattgctgg
      901 caactgaaag tgctgaggaa gcttttgaaa ttgcgcaaaa gcttgatgcc tataataccg
      961 aacgccgtga gattgaaaat caagtcttgc aggaggcttt ggagaaagcc gagcagcaaa
     1021 aagcaggttc ggtggtatat atcgcgggag aaggttggca tccgggcgtg atcggcattg
     1081 ttgccagccg tctcaaagaa cgttatggcc tgccatcctg tgtgctgacg attgaggacg
     1141 gtaaagcaac cggatcaggc cgctcgatta ccggtgtcga tctcggtgca tgtgttatcg
     1201 cggcacgtca ggcaggcatc attaccgatg gcggcggcca caagatggcg gcaggatttt
     1261 cgctagatca tgaccggctt gatgatttca acgcattttt gtccgaacgt attagtaaac
     1321 aaatcgaaga agaggggatt gtgccaacga tcaatattga tggtgcggtt tcagtcgaag
     1381 gggcaacgat ggagctggtg gaagtgttgc agaagctggc gcccttcggc accggtaatg
     1441 ctgagccgcg ttttgctttc tcgaatgtgc ggattgccaa atcagatgtc gtcggcgtta
     1501 atcatgtgcg ctgcttttta accggtcttg atagcaaaaa gcagctggcg gcgatcgcct
     1561 ttaactgcgt tgatactgaa cttggccggg ccttgcttag acataagggc ttgccgctgc
     1621 atatcgtcgg acggctgcgt gaaaacatct ggcaggggcg gtcttcggtg cagttgctga
     1681 tcgatgacgt cgcccccgca tcttagtttt aggccgatgc gcaactcacc atttttcatt
     1741 gttggtatta tgtgtctggc cgaggtgttg accatgctcg gcgtctttac ctttccatcc
     1801 ctgatgccgg aatttattgc gacctggcaa ttatccaaca ccgaagctgg ttggattgcc
     1861 ggtattttgt taggtggata tgcaatcagt gtgccggtgt tggtcagcct gaccgaccgt
     1921 attgatgccc ggctggttta tttaggcggt gcatccttga cggcggtttc cttatttggc
     1981 tttgcctatc tcgcgagcgg tttctggtcg gcgctgattt tgcgcgtgct ggcggggttt
     2041 ggcctagcag cgacttatat gccgggattg cgggtgttgg tcgatcgcta tgaaggcgcc
     2101 aaacaggccc gggcgctggc gttttatacc gcaagcttta gtctcggtac ggcggtttcc
     2161 ttttattatt cgggcgaggt tgggacctcg tttggctggt ctcaggcgca cgtgattgcc
     2221 ggcgtgggcg cggttgcagc ggcgatcttg gtgattatgg cgatgcatcc ggtaacgacg
     2281 caaaaaccag atgttgaaac acggttgctc gatttccggc cgatcctgcg taatagggag
     2341 gtcatgggat atgtgttggc ctattgcgct catagctggg agttgtttgc catgcgttcc
     2401 tgg
//
LOCUS       DASCNL010000015         1083 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000045028, whole genome shotgun sequence.
ACCESSION   DASCNL010000015 DASCNL010000000
VERSION     DASCNL010000015.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000045028"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="QF359_00165"
     CDS             complement(<1..394)
                     /locus_tag="QF359_00165"
                     /inference="COORDINATES: protein motif:HMM:NF018979.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HJO85351.1"
                     /translation="MDTTASENDKESYIGNLLLPLIILALAAVCFTQSLDFPSGEDVG
                     PAVVPFLWIGFTVVFCVALIVQAILRKGKPDPVPGKIGFVLLFVCWLVVYLAAIETIG
                     YFFSSFIFLVVSMYVLTFRRHVIIFTVSI"
     gene            complement(508..>1083)
                     /locus_tag="QF359_00170"
     CDS             complement(508..>1083)
                     /locus_tag="QF359_00170"
                     /inference="COORDINATES: protein motif:HMM:NF015366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HJO85352.1"
                     /translation="LPINTWQQLVADAKAKAAAGKKQIWVGPAAGGLDHVMAMKTWKA
                     AGISSAKYIPFKGGKKAVIELLGGRSVAYVGNPRDTIGQPKLKVAALARAERLPAFPN
                     APTFRELGIKGLDDEIMWRGFAMKSGAPANVRKFWNDLFKKVSTDPEWVAHVKKSSID
                     PVLHTHNKFLSIIKKDMAEVRVWAKGAGILK"
BASE COUNT          321 a          287 c          222 g          253 t
ORIGIN      
        1 caattgaaac ggtaaagatt ataacatgcc gtcggaaggt caggacatac atcgatacga
       61 cgagaaaaat aaatgagctg aaaaaatatc cgatggtctc aatcgcagca agataaacca
      121 ccaaccaaca tacaaataac aagacgaaac cgattttacc aggaactgga tccggcttcc
      181 ctttccgcaa aatggcttgg acaatgaggg caacgcagaa aaccaccgta aagccaatcc
      241 aaaggaaagg aacaaccgct gggccgacat cttcacccga cggaaaatcc agtgactggg
      301 tgaaacaaac agccgcaagt gccaagataa taagtggcag caaaagattt ccgatatagc
      361 tctctttatc gttttcgctg gcagtcgtat ccatagccac cgcctcaaaa ctaaattatt
      421 ctcagtgtaa catatctaaa agcccccgct aacctaggcg taatttctcc tcaattagca
      481 ggggataatt agtaactcaa aactgcttta cttcaaaatg ccggcgcctt tcgcccacac
      541 tctaacctca gccatatcct ttttaatgat actcaagaat ttattgtgag tatggagcac
      601 cgggtcgatg ctagattttt tcacatgggc gacccattcg ggatccgtac taactttctt
      661 gaacagatca ttccaaaact tacgaacatt agccggagcg cctgatttca tggcaaatcc
      721 ccgccacata atctcatcat cgaggccttt aatacccaac tcacggaacg taggtgcatt
      781 tggaaatgca ggaagccgtt cagctcgcgc caaagcggcg acttttaatt taggctgacc
      841 aatggtgtca cgcgggttgc cgacataagc gacgctacgg ccgccaagca gttcaattac
      901 agctttctta ccacctttaa acggaatgta tttggccgac gaaatgcccg cggctttcca
      961 tgtcttcatg gccatcacat gatcaagacc acctgcagct gggccaaccc agatttgttt
     1021 tttgcccgcc gctgccttgg cttttgcatc ggccaccaac tgctgccacg tgttgattgg
     1081 caa
//
LOCUS       DASCNL010000016         1118 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000045968, whole genome shotgun sequence.
ACCESSION   DASCNL010000016 DASCNL010000000
VERSION     DASCNL010000016.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000045968"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            223..801
                     /locus_tag="QF359_00175"
     CDS             223..801
                     /locus_tag="QF359_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HJO85353.1"
                     /translation="MDLTGEYRIPATREKVWEALNDPEILKQCIDGCQELNKDSDTEF
                     SAKVTAKVGPVKAKFAGKVVLSELDPPNGYTISGEGQGGVAGFAKGGADVKLADDGGE
                     TVLSYEAKAEVGGKLASVGSRLVEGVAKKQAEDFFGKFSEIVSGDAEPAAAAPAEALA
                     PAVAGDNEGISPMVWGIGLVVVVGLLLYIFAS"
BASE COUNT          290 a          220 c          311 g          297 t
ORIGIN      
        1 gccaaagaca ccggttattt tgctgcaacc tgggcggctt tttttatttt agctgatgag
       61 ggtgaagata ttggcttcaa cactaaaacc cgggttgata attttattgc cggtattgaa
      121 gacgacagtt tttagtttat tggccgcctg attacttgat tattaaataa gctgacacta
      181 agttacgctc ccctaaaatt ggaattagtg gagttaaata atatggattt aaccggtgaa
      241 tatcgcatcc cagccacacg cgaaaaagtg tgggaagccc tcaacgaccc ggaaattttg
      301 aaacaatgca ttgatggctg ccaggagctc aataaagatt cagataccga gttctcggcc
      361 aaagtgacgg caaaagttgg gccggtgaaa gctaaatttg ctggtaaagt ggtgctttcc
      421 gagcttgatc caccgaacgg ctatacgatt tcgggtgagg gccaaggtgg ggtcgccgga
      481 tttgccaaag gtggcgcgga cgtgaagctc gctgatgatg gtggcgaaac cgtgctgagc
      541 tatgaagcca aagccgaagt gggaggcaag ctcgcgagtg ttggcagccg cttggtcgaa
      601 ggggtggcaa aaaagcaggc tgaagacttc tttggcaaat tcagtgaaat tgttagcggc
      661 gatgctgaac cagctgctgc agctcctgcg gaagcactgg cgcccgctgt agctggcgat
      721 aatgagggga tttccccgat ggtctggggt atcggcctgg tcgtcgtggt gggattgctg
      781 ctctatattt tcgcgtcgta aatccttaaa taaggggaca gcttacttaa ttcaccaaca
      841 ttacaaaagt ttaatactgt ggtgaaagcg gcagagttct gacaaaaaac gtatgaattc
      901 tgataatatt gtgaagcccg aaggtcgaat tttcttgatt cttggccggt tattccataa
      961 tattgccaca gttcccggca atggttgcct aatgaagggg ccagtcctgg aagcgccaag
     1021 cccaatggtg ggttggaaat ttgtattgat aggcatgttg ctcagttagg aggatatgac
     1081 tgatggtttt ggatcatctc attaagttgt cccgtata
//
LOCUS       DASCNL010000017         1406 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000046879, whole genome shotgun sequence.
ACCESSION   DASCNL010000017 DASCNL010000000
VERSION     DASCNL010000017.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000046879"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            153..1340
                     /locus_tag="QF359_00180"
     CDS             153..1340
                     /locus_tag="QF359_00180"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014187823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HJO85354.1"
                     /translation="MISDPVVIVGAARTPMGGLGGDFGTVSAPELGAAAIAEAINRAG
                     IKAKDVDDVVMGVVLPAGQGQAPARQAAIGAGVPKDIGATTINKMCGSGMKATMFAHD
                     NILAGSHDVMVAGGMESMSNAPYILLDARTGMRMGHGEVKDHMFLDGLEDAYEPGKLM
                     GAYAEATAQSYQFTRESQDAFAITSLERARKATEDGTFAKEIVPVTVKSRKGETVVEI
                     DEQPGNAIPEKIPNLRPAFAKDGTVTAANSSSISDGAAALILMRQSEAEKRGLKPLAV
                     ILAHTTHAQEPEWFTTAPIGAIKKVLEKTGWDKDDVDFYEINEAFAVVTMAAMQDLGI
                     SHDKVNVHGGACSLGHPVGASGARIIVTLLNALEKYDKTKGVASLCIGGGEGTAIAIE
                     RVK"
BASE COUNT          359 a          305 c          385 g          357 t
ORIGIN      
        1 ggttggggct atctggctcg cggtattatc ggactttcga cgatatactt tttataccaa
       61 ttattctagt caacctaaca tttgttctgg tgccaaacaa attgaacgct acaatcacca
      121 caaactttaa ttaatcgaaa agagattcaa aaatgatctc agatcctgtt gtaattgttg
      181 gtgccgctcg tactccgatg ggaggactcg gcggtgattt tggtactgtt tccgctcctg
      241 aattgggtgc cgccgctatc gccgaggcga ttaaccgcgc cggcattaaa gctaaagatg
      301 tcgatgacgt tgtcatgggc gttgttttac ctgccggtca agggcaggca cctgctcggc
      361 aagctgcgat tggcgccggc gtacccaaag atatcggcgc gaccacaatc aataaaatgt
      421 gcggctccgg catgaaagcg actatgtttg cgcacgataa tattctcgcc ggttcgcatg
      481 atgtgatggt tgccggcggc atggaaagca tgagtaatgc tccttatatc ctgctggatg
      541 cccgaaccgg tatgaggatg ggccacggcg aagtcaaaga tcatatgttt ttagacggac
      601 tggaagatgc ttatgagccg ggtaaattga tgggagctta tgccgaagcg acagctcaaa
      661 gctatcagtt tacccgagaa tctcaggacg cctttgctat tacttcgctg gaacgcgccc
      721 gcaaggccac ggaagatgga acttttgcca aagaaattgt cccggtgacg gtaaaatccc
      781 ggaaaggtga aacggtggtt gaaatcgatg aacagccggg taacgcgata ccggagaaaa
      841 ttcctaattt gcgtccggct tttgccaagg atggtactgt aacggcagca aattcaagtt
      901 ccatttcaga tggtgcggca gcgcttatac tgatgcggca atcggaagct gaaaagcgtg
      961 gcttaaaacc gcttgcagtc attcttgctc ataccactca tgcacaggaa ccggaatggt
     1021 ttacgaccgc gccaatcgga gcgattaaaa aagttctcga gaaaaccggc tgggacaagg
     1081 atgacgttga cttttacgaa atcaatgaag cctttgcggt ggttaccatg gctgccatgc
     1141 aggatttggg tatttcccat gacaaagtaa atgttcatgg tggtgcctgc tcgttgggtc
     1201 atccggtagg tgcgtctggt gcacgtatta tcgtgacact tttgaatgca ttggaaaaat
     1261 acgataagac caaaggtgtt gcgtcgcttt gtattggtgg cggtgaaggc acggcgatcg
     1321 ccattgagcg ggtgaagtaa tttagggaaa tatgtttaca gtattaataa ccggggctaa
     1381 tcgagggctg gggcttgaat ttaccc
//
LOCUS       DASCNL010000018         2476 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000049453, whole genome shotgun sequence.
ACCESSION   DASCNL010000018 DASCNL010000000
VERSION     DASCNL010000018.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2476)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2476)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000049453"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            180..1310
                     /locus_tag="QF359_00185"
     CDS             180..1310
                     /locus_tag="QF359_00185"
                     /inference="COORDINATES: protein motif:HMM:NF014893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJO85355.1"
                     /translation="MAEINLDTVDEIGLAIVGCGTIGRIRAKYAREYPGVKWLGLCDI
                     NDDLGKQLAEDTNANFFTNDFSQLIKRPEVNAVMIITDENKHTEPTLLAVEQGHKLFI
                     EKPLATEARESMQILNAITDGGLDACVGYTQRFRRRFLTVKERLQNGQIGDVHTVTTR
                     AFMNRMVPIATIAKTNARHNLTPMVVSGTHSLDMSMWLMEGKKPVSVYAKSVDKVLNE
                     WGTKDSTFGIFTMDDGTIFSMNICWALPEVWPGTVYGLEIGIVGTEGIIDIEDTHRDL
                     VLATNHNLPGGYISGGYEAPERHVDFLTSYPPGDLWNDQLYGPMREETIGWFTRIMMG
                     TPTPHATAAEGHSNLLCTMAMDLSAKRGAEVELPIDPEEFYK"
     gene            complement(1416..1748)
                     /locus_tag="QF359_00190"
     CDS             complement(1416..1748)
                     /locus_tag="QF359_00190"
                     /inference="COORDINATES: protein motif:HMM:NF019498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO85356.1"
                     /translation="MMQFGGEFIKVGIVTYEAGEAPPPHSHPNDEQWIYMLEGRLAHL
                     LDDEIVTVGPGDLVHIPRNTVHGIRLLESPCRFFTCKSPAGSGNLSEDYTEVPNVTEL
                     EQRLAEVS"
BASE COUNT          647 a          604 c          606 g          619 t
ORIGIN      
        1 atcaatatca aagtggctgt cgaagcttcc attgacgctt acaatcaacg ccaaaacgag
       61 gacgattttc aaaactttta gcggctttac gataggcttt tttaagctta aaaagctgca
      121 tcggaatcaa atcataatca gtacaacaaa attcaattag caccattaag gggtaacaca
      181 tggctgaaat taacctggac accgtagatg aaattggctt ggcgattgtc ggctgcggta
      241 cgattggccg cattcgcgcc aaatatgccc gagaatatcc gggtgtaaaa tggcttggcc
      301 tatgtgatat taatgatgat ctcggcaagc agctcgccga ggacaccaat gccaattttt
      361 ttaccaatga tttcagccaa ttgattaaac ggccggaagt taacgcggtc atgatcatca
      421 cagatgaaaa caaacacacc gagccgactt tgctggcagt tgaacaaggc cacaaactgt
      481 ttatcgaaaa accactggcg acggaagccc gcgaatcgat gcagatctta aatgcaatta
      541 ccgatggcgg cctcgacgcc tgtgttggtt acacccagcg tttccgccgc cgcttcctga
      601 cagttaagga gcgtcttcaa aacggtcaga tcggggatgt gcataccgtg acgacgcggg
      661 cttttatgaa ccgtatggtg ccgattgcca ccattgctaa aaccaatgcg cgtcataatc
      721 tgacgccgat ggtggtctcc ggcactcact cgctcgatat gtcgatgtgg ctgatggaag
      781 gcaagaagcc ggtttccgtc tatgcgaagt cggtcgacaa agttcttaac gagtggggca
      841 ccaaggattc gaccttcggc atctttacca tggatgacgg caccatcttt tcaatgaata
      901 tctgctgggc cttaccagaa gtgtggccgg gcacggtcta tggccttgag atcggcatcg
      961 tcggcaccga aggtatcatt gatattgaag acacccaccg cgatctcgtg ctggccacta
     1021 atcataatct gccgggcggt tatatctccg gcggctacga ggctcccgaa cgccatgtcg
     1081 actttttaac cagctacccg ccgggtgatc tctggaacga tcaactttat ggtccgatgc
     1141 gggaagaaac cattggttgg ttcactcgta ttatgatggg cacacccacg ccgcacgcta
     1201 cggctgctga ggggcattcg aacctcctct gcacgatggc gatggatttg tcggccaaac
     1261 gcggtgccga agtcgaactg ccgatcgatc ccgaggagtt ttataagtaa agaattatgg
     1321 ggacatgtat ttgttacacg ttatatttta attaatgatt catattataa ttaaggggct
     1381 gacccatcta actagttcaa atatagttta acccattagg aaacctcggc gagacgctgc
     1441 tcgagttcgg tgacgttggg cacttcggta taatcttcgc ttagatttcc cgaaccggcg
     1501 ggactcttac aagtgaaaaa gcggcaggga ctttcgagga gccgtatgcc gtggacggtg
     1561 ttacgcggga tgtgaacgag atctccagga ccaacggtaa cgatttcgtc gtccagcaaa
     1621 tgggcgaggc gaccctcaag catgtagatc cactgctcat cattggggtg ggagtgcggc
     1681 ggcggtgctt cgccggcctc gtaggttaca atgccaactt taatgaactc gcccccgaat
     1741 tgcatcatca tgacattcgg gttcacaaca tctggggtcg cctgcatgtc ttgagccttg
     1801 tagaacggca ttgactactc tcctcttcca tattcacctt tgatcttcgt tggatcaaga
     1861 tccaatcgtg tagaatttga tcctaatcta acccggcata tccaggatga actatgacat
     1921 cagattaggt caattcggct ttcccaacaa ggctgaccac cggcgcttta aaccgcgccc
     1981 acttctaaat taagagatgg aacacataaa gggggcaagc cacctagcga ggaacgataa
     2041 cgttgtcact atggtgtcaa aataataatc ttgaaaacca ctacctggtt acgtcccccg
     2101 tcagcaccta tggcactagc ttgtagtatt tgataagaga gagtttctgg ctcatcgtaa
     2161 cgagatagga gttatgaatg cgacaaaata tgagaacacg ggttcttcct cagagaagac
     2221 ggttaaagat atccgccgcg ccacccgcaa atagtattca tccattttca ccaaatagtg
     2281 atgatacgct ggaattaatt atgtttgata atgttgccga taatccgcct ttttcaaccg
     2341 attgtcggca cagtgatgaa acccttcgcg ccgagccacc gttcgctact atgttgcatg
     2401 gattaatcat cccagaggtc gtcggtgata caatgtttgc caatatgact tcggcctatg
     2461 agggcttgag tgaccg
//
LOCUS       DASCNL010000019         3261 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000049970, whole genome shotgun sequence.
ACCESSION   DASCNL010000019 DASCNL010000000
VERSION     DASCNL010000019.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000049970"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="QF359_00195"
     CDS             <1..332
                     /locus_tag="QF359_00195"
                     /inference="COORDINATES: protein motif:HMM:NF020927.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate hydrolase family protein"
                     /protein_id="HJO85357.1"
                     /translation="LAMAEVGVDNIIVHYGNSSGGTIGSSTIMSEEDSIERTANVIDA
                     LQTKHSDLIFTCHGGGIETPDDFAKFLEREPRLDGYVGGSSAERFPIEQSVSATTEGF
                     KAIKLKR"
     gene            393..1148
                     /locus_tag="QF359_00200"
     CDS             393..1148
                     /locus_tag="QF359_00200"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HJO85358.1"
                     /translation="MHILSGGRLQLKKQIYLPEAAPDEIITLPVSCFLFRHPQGNVLF
                     DTGCHPSVAGNPEKRWGDMAQSVVPVMGVDDNIVSELRRVNLTPEDIDIVVNSHLHSD
                     HCGCNEFFSKAKIYVHADELAIARDPALEGRGYFKADWDHPMPIIEVTGEIDIFADGR
                     IVLLPLPGHTPGLTGLFASLPNSGAYLLTSDAVPLRENLDWEILPTNTWNPDLLTKSF
                     TEIKRIGKSGAAVVCGHDLAQSSTFKTAEEFYD"
     gene            complement(1158..2123)
                     /locus_tag="QF359_00205"
     CDS             complement(1158..2123)
                     /locus_tag="QF359_00205"
                     /inference="COORDINATES: protein motif:HMM:NF012607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal binding protein"
                     /protein_id="HJO85359.1"
                     /translation="MSNPTIAVADSVFPNLDLAKEALTRVNAGEFQMSEDGSASSILA
                     VAAYADALFVTYSQINAEVIAGLNNCKVIGRFGIGVDNIDLVAAGEKGITVCYAPVYC
                     LDEVSDHAMALLLACARKIPFANKRASEGRWEMPAVVPIGRFRGKTIGLIGLGNIPQQ
                     IVGKAQAFGINVIASDPYCPEDVFSRLNVEKVELDDLLGRSDYVSVHAPLTPETENMF
                     NMDAFKKMKNTAYLINTARGPLVEINDLAAALDAGEIAGAGLDVLPEEPPAADNPLLG
                     RDDVVLTPHTGFYSEDALLDLQTTVATDVASVLAGEEPKYPITAK"
     gene            complement(2260..>3261)
                     /locus_tag="QF359_00210"
     CDS             complement(2260..>3261)
                     /locus_tag="QF359_00210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85360.1"
                     /translation="LTRNVSYPAKLGYWPAFIFFLAFAWLEINWPGASSPSKVATALT
                     IYSVITFIGMLIYGRETWLKYGECFSVVYELFARFAITEIRVPDEAKPDQIEWNLRPP
                     GIGLRNGVGIGSRPGEQPSFTLMFFVLLLLSTVTYDGFTETGEFKQVALKYYYFIQDV
                     TGGSLGSAGISLVDTSGLISFPVMFVGVYMLFIWQIALVGDDLRSFKKLAPLLVLSIV
                     PISIAYHLSHYVSLLAIEGQLVIRQLSDPFGYGWDLFGTANYKTDITLINAKFVWFFS
                     VVLIVIGHIVAVYIAHAEALTYYGDRKRALVSQIPMIVLMVGYTMLSLWIIAQPIVS"
BASE COUNT          879 a          799 c          808 g          775 t
ORIGIN      
        1 ccctagccat ggcggaagtc ggcgttgata atatcatcgt gcattatggt aattcgtccg
       61 gcggcaccat cggttcctcg accatcatga gcgaagaaga ctcaatcgag cgcacggcca
      121 atgtcatcga tgcgctgcaa accaagcaca gtgatctgat ttttacctgc cacggcggcg
      181 gcatcgaaac accggatgat ttcgccaagt tcttagaaag agagcccagg ctggacggtt
      241 atgtcggcgg ctcgtctgcc gaacgtttcc caatcgagca atccgtctcc gcgacgactg
      301 aaggctttaa agccatcaag ttgaaacgat aataaaggta cctggtacct ttttttgttc
      361 tctaacccaa tgagggaaac cttcacgtga agatgcatat tctttccggt ggccgcttgc
      421 agctgaaaaa acaaatctat ctgcctgagg cagcgccgga cgaaatcata accctgccgg
      481 tttcctgttt tctgttccgc caccctcaag gcaatgtgct gttcgatacc ggttgccatc
      541 caagtgtcgc cgggaaccct gaaaaaagat ggggagatat ggcacaatct gtggttccgg
      601 tcatgggagt tgacgataat attgtcagtg agctgcgccg ggttaatctg acgccggaag
      661 atatagatat cgtagttaac tctcatttgc atagtgacca ctgcggctgc aatgagtttt
      721 tttccaaggc gaagatttat gttcatgctg atgaactggc gattgcaaga gatccagccc
      781 ttgaaggtcg gggatatttt aaagccgact gggatcatcc gatgccgatc attgaagtca
      841 ctggcgaaat tgatatcttc gctgacgggc gcatcgtgct gttgccgtta cccgggcata
      901 caccggggct taccgggttg ttcgccagtc tgcccaatag tggcgcctat ttgctgactt
      961 ccgatgcggt gccgctaaga gagaatttgg attgggaaat actgccaaca aatacctgga
     1021 acccagattt attgacgaag tctttcaccg agatcaaacg gatcgggaaa tccggggcag
     1081 cggtcgtctg cggccatgat cttgcgcaat cctcgacgtt taaaaccgcc gaggaattct
     1141 atgattagcg cgttgagcta tttcgccgtt atcggatatt tcggctcttc accagcaagt
     1201 accgaggcga catcggttgc aaccgttgtc tgcaagtcca acagcgcgtc ttcggaataa
     1261 aatccagtat gcggtgtcag tacgacatca tctcggccaa gcaaaggatt gtcggctgct
     1321 ggcggttctt ccggtagcac atccaggcca gcaccggcaa tttcgccagc atccaaggcg
     1381 gcggcgagat cattaatttc aaccagtgga ccacgcgccg tattaatcaa ataggcggtg
     1441 tttttcattt ttttaaacgc gtccatattg aacatgtttt ctgtttcggg tgtcagtggc
     1501 gcatgaaccg acacataatc agagcggccc agcagatcat caagctcgac tttttcaaca
     1561 ttgaggcgtg agaagacatc ttccgggcag taggggtcag aggcgatgac attgatacca
     1621 aaagcttgcg ctttaccaac aatttgctgt ggaatattgc cgagcccaat gagcccgatg
     1681 gttttgccac ggaaacggcc aatcggcacg acggccggca tttcccagcg gccttcggat
     1741 gcgcgcttat tggcgaacgg gattttgcgc gcgcaagcca gcagcaaggc catggcgtga
     1801 tcggaaacct catccaggca gtaaaccggc gcatagcaaa ccgtgatgcc tttttcgcct
     1861 gccgcgacca aatcgatgtt atcgacaccg ataccaaagc gaccgattac tttacaattg
     1921 ttcagaccag caataacttc ggcattgatt tggctgtagg tgacaaacaa cgcgtctgca
     1981 taggcggcaa cggctaaaat actgctggcc gaaccatctt cagacatctg aaattcaccg
     2041 gcatttacgc gtgtgagcgc ttctttggcg agatcgagat tcggaaatac tgaatcagca
     2101 acagcaatgg ttggatttga cataatactt tcctttaccc cttaaatgaa caattcttgt
     2161 tagtcttata taagattatg gtaggctgaa taacaccgga tttccgttct tgccagtcct
     2221 ttttcatgcc cgctgacgca taagttattt gggatgttat tagctgacaa tcggttgggc
     2281 aatgatccag agacttaaca tggtatagcc gaccatcagc acgatcattg gaatttgact
     2341 gaccaaggcg cgtttgcgat cgccgtaata ggtaagggct tcggcatgtg caatatagac
     2401 cgcgacaatg tggccgatga caatcaaaac aactgaaaag aaccaaacaa acttggcatt
     2461 gatcagcgta atgtcagttt tgtagttggc ggtgccaaac aaatcccagc catagccgaa
     2521 cggatcggac agctgcctga tgaccaattg cccctcaatc gccaaaagcg aaacataatg
     2581 cgataaatga tatgcaatgg agatcggtac aattgataga acgagaagcg gcgccagttt
     2641 tttgaaactt ctgagatcat cgccgacaag cgcaatctgc cagataaaaa gcatatagac
     2701 accgacaaac atcactggaa aagaaatcag cccggaggta tcgaccaaag aaataccagc
     2761 agagccaagg ctgccgcccg taacatcttg aataaaatag tagtatttga gtgcgacttg
     2821 cttaaattct ccggtttcgg taaagccgtc ataagtcacc gttgagagca gcagcaggac
     2881 aaaaaacatc agagtaaaag aaggttgttc gccgggtctt gatccaattc ccacaccatt
     2941 tctcaggcca atcccaggtg ggcggaggtt ccactcaatt tgatcaggtt tagcctcatc
     3001 gggtactctg atttctgtaa tggcaaagcg ggcaaacagc tcataaacca ccgaaaaaca
     3061 ttcgccatat ttaagccagg tctcgcgacc gtagatcaac atgccaatga aggtaatcac
     3121 gctataaatt gtgagcgccg tcgcgacctt actgggggaa ctggcacctg gccaattaat
     3181 ctccagccag gcaaaggcga gaaaaaatat aaaagctggc caataaccca atttggcagg
     3241 ataggatacg ttgcgagtta g
//
LOCUS       DASCNL010000020         1847 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000050116, whole genome shotgun sequence.
ACCESSION   DASCNL010000020 DASCNL010000000
VERSION     DASCNL010000020.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000050116"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="QF359_00215"
     CDS             complement(<1..302)
                     /locus_tag="QF359_00215"
                     /inference="COORDINATES: protein motif:HMM:NF017973.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HJO85361.1"
                     /translation="MSGDHESQDLIKRVTEAAVKAVAARDDVTVAFAPGAHGLTQTED
                     GSQARLPTPARQFAKGDLYALRGEADAAALRLRYNDRKTFNRQRPMGGNSADLFDIA"
     gene            complement(328..1329)
                     /gene="cobS"
                     /locus_tag="QF359_00220"
     CDS             complement(328..1329)
                     /gene="cobS"
                     /locus_tag="QF359_00220"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HJO85362.1"
                     /translation="MNDTTLHGAGTFPFDAPDITISARQVFGIDTDMEIPAFSKGNEY
                     VPIVDEAYWFDHDTTMAILAGFAHNRRVMIQGYHGTGKSTHIEQVAARLNWPCIRVNL
                     DSHISRIDLIGKDVIVMKDGHQVTEFKEGILPWCLQNPAALVFDEYDAGRPDVMFVIQ
                     RVLEVEGKLTLLDQSKVIKPHNYFRLFSTSNTVGLGDTTGLYHGTQQINQGQMDRWNI
                     VTTLNYLEHDAEEEIVLSKVPAYNTAEGQVTIKKMVELADLTRSGFINGDVSTVMSPR
                     TVIIWGENTQIFGDLGFAFRLTFLNKCDEVERPIIAEYYQRCFGEELPESAANVTLS"
     gene            complement(1382..1600)
                     /locus_tag="QF359_00225"
     CDS             complement(1382..1600)
                     /locus_tag="QF359_00225"
                     /inference="COORDINATES: protein motif:HMM:NF012451.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HJO85363.1"
                     /translation="MAPNASLSAVERKALATLDLDTSVTVIEIKARYKLLVKRHHPDV
                     TGGDKKSEERFKQINEAYETIMNCLAPE"
BASE COUNT          462 a          481 c          402 g          502 t
ORIGIN      
        1 gcaatatcaa aaagatcggc gctattgccg cccatcggac gctggcgatt gaaggtttta
       61 cggtcattgt agcgaagccg gagcgcggcg gcatcagctt ctccccgcaa ggcatataaa
      121 tcacccttag caaattgacg ggccggcgtt ggcaaacggg cctgactgcc atcttctgtt
      181 tgggttaggc catgtgcccc cggggcaaac gcaaccgtta cgtcatcgcg tgccgcaacg
      241 gctttcacgg cggcttcggt aacgcgtttg atcagatctt ggctttcatg gtctcctgac
      301 ataggagctc cttacatctc taaagcttta agagagagtg acgttagccg ccgattccgg
      361 cagttcttca ccaaagcagc gctgataata ttcggcaatt atcgggcgtt cgacctcatc
      421 gcatttgttg aggaaggtca gccggaaggc aaagcctaag tcaccaaata tttgagtatt
      481 ttcaccccaa ataataaccg tccggggcga cattaccgtc gacacatcac cgttgataaa
      541 gcccgaccta gtcagatcag cgagctcaac catcttctta atagtaacct gaccttctgc
      601 cgtgttgtag gccggaactt tcgacaaaac gatttcttct tcggcgtcgt gctccagata
      661 gttcaacgtg gtgacgatgt tccagcggtc catctggcct tggttaattt gctgggtgcc
      721 gtgataaaga cccgtcgtat cacccaaacc aaccgtgtta gaggtcgaga acaggcggaa
      781 ataattatgc ggtttaatta ccttactttg atcaagcagg gtcaatttac cttcaacttc
      841 caatactcgc tggatcacaa acatcacatc cggccggccg gcgtcatatt catcaaacac
      901 cagtgctgct ggattttgca ggcaccaagg caatatacct tctttaaatt cggtaacttg
      961 gtgaccgtct ttcatgacaa tcacatcttt accgatcaaa tcaatacggc tgatatggct
     1021 gtccagatta acccggatac agggccaatt gaggcgggcg gccacctgct caatatgggt
     1081 tgatttaccg gtaccgtgat aaccttggat cataacccgg cggttatggg caaagccagc
     1141 taggatcgcc attgtcgtgt catgatcaaa ccaataggct tcatcaacga tcggcacata
     1201 ttcattgcct ttgctaaaag ccgggatttc catatcagta tcgatgccaa aaacctggcg
     1261 cgccgaaatg gttatatctg gtgcatcaaa cgggaatgta cccgctccat gtaaagtagt
     1321 atcgttcata ttgttctttc cgattgctaa ctgtgatcag agatcttaac ctgcaccaaa
     1381 attattcagg cgccaggcaa ttcataatcg tttcataggc ttcgttaatc tgtttgaacc
     1441 tttcttctga cttcttgtcg ccgccggtaa cgtctggatg atggcgtttt accagcaatt
     1501 tgtatctcgc tttgatttct atgaccgtca cagaagtatc aagatctaat gtagcgagag
     1561 cttttctctc tactgcagat aaagacgcat tcggcgccat acttgcagat tgtttaaacc
     1621 gacatttccc aagtaatctc caaactcggt acgagtatac aaaatcacac tatttcttaa
     1681 agggctatct tctccaacca cactacacct ccagctttgg caatttaacg ctgttctgaa
     1741 tgctattttt cgataattcc cgttatccag acgcacttct cccatcaatt ccatattacc
     1801 gttgatttcc cccagtctac accgggacgg gctttcgtcg tagatca
//
LOCUS       DASCNL010000021         1153 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000051113, whole genome shotgun sequence.
ACCESSION   DASCNL010000021 DASCNL010000000
VERSION     DASCNL010000021.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000051113"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1153
                     /locus_tag="QF359_00230"
     CDS             <1..>1153
                     /locus_tag="QF359_00230"
                     /inference="COORDINATES: protein motif:HMM:NF021653.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HJO85364.1"
                     /translation="ANEVARQLRLRDLAGLVVIDFIDMEIHRNQTAVEHRLKEAMRKD
                     RARIQIGRISPFGLLELSRQRLRPSITETMTEICPHCGGSGIRRSIESTALHVLRGIE
                     EEGARQRAKEMEVFVHSQVALYILNEKRDAVAEIEQKFEIKVVIMVDDGLIPPDFNIN
                     RTVTNKQANAKAKSSGSKASDPEADESSEDQPKRKRRRRSRRRNRDEDEDAAKSPEGQ
                     ASADEAEAGDSGDTTAEAAQTDKEKSNKPARRRRGRRGGHRRNRRTEAASETSSEDTS
                     ETTSESITEEISDDNNITTDDTEVKTPKNKKADQAEDKTKAGAKGEEEKPKRRRRVRR
                     KKAAASKGDDKSDSKSKSKVSSEPASPEPEAEESKEAVTEPAAKPDSEHP"
BASE COUNT          353 a          292 c          299 g          209 t
ORIGIN      
        1 ccgccaacga agttgcccgt caattacgct tgcgcgattt ggctggcctc gtggtgatcg
       61 acttcatcga catggaaatt catcgcaacc agactgcggt ggaacaccgc cttaaagaag
      121 cgatgcgtaa agatcgcgct cgcattcaaa ttggccgcat ctctcccttt ggcttgctcg
      181 aattgtcgcg tcaacgtttg cgcccgagca tcaccgaaac aatgactgaa atttgcccgc
      241 attgcggcgg ctctggtatt cgtcgatcaa ttgaatcaac ggcgctgcat gttcttcgcg
      301 gtattgaaga agaaggtgcc cgccagcgcg ccaaagaaat ggaagttttc gtgcactctc
      361 aggtagcgct ttatatcctc aatgagaagc gtgacgccgt ggccgagatt gaacaaaagt
      421 ttgagatcaa agttgtaatt atggtcgatg atggcttaat tccgccggac tttaatatta
      481 accgaacggt cacgaataag caggccaatg cgaaagccaa atcttctggt agcaaggcgt
      541 cggacccgga agccgatgaa tcttcagaag atcaacctaa gagaaaacgc cggcggcgct
      601 caagacgccg taatcgagac gaagacgagg acgcggctaa atcacctgaa ggtcaagcct
      661 ccgcagatga ggcagaagct ggtgatagcg gtgacacaac cgccgaagcc gctcaaacgg
      721 ataaggaaaa atctaataag ccggcacgtc gccgccgtgg ccgccgtggt ggtcaccgcc
      781 gcaaccggcg tactgaagct gccagcgaaa cttcgagtga agataccagc gaaactacaa
      841 gcgaatctat tactgaagaa attagtgatg ataacaatat caccactgac gatactgagg
      901 taaaaacacc aaaaaataaa aaagctgatc aggcagaaga taaaaccaaa gcgggggcaa
      961 agggtgaaga agaaaaaccg aaacgccgcc gccgggtccg ccgtaagaaa gccgccgcat
     1021 ctaaaggcga cgataagtcg gacagtaaaa gtaaatcgaa agtatcgtca gaacctgcat
     1081 cgccagaacc cgaagcagaa gagtcaaaag aagcagttac cgaaccggct gctaaaccag
     1141 attccgagca ccc
//
LOCUS       DASCNL010000022         2750 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000051950, whole genome shotgun sequence.
ACCESSION   DASCNL010000022 DASCNL010000000
VERSION     DASCNL010000022.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000051950"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..680
                     /locus_tag="QF359_00235"
     CDS             <1..680
                     /locus_tag="QF359_00235"
                     /inference="COORDINATES: protein motif:HMM:NF039581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85365.1"
                     /translation="FLADYLDIPTVIIPPVAALFSAFGMFAMDLGQDFARSYIARIES
                     ANIRDIANLYKEMESEAFETFAVHGVSKKDITLQRTADMRYIGQFMEVETELQNGTLT
                     KKILHAGAEAFGKKHEALYTFSMPWKGVEILTLRLKASADKAPFHLPKIKRGKANPSA
                     ALKRKRMAWFQGKRLKTPVYDGALVRAGNKIPGPAIIEESTTTVVIPESYTCRVDGHK
                     NYILTRN"
     gene            706..2493
                     /locus_tag="QF359_00240"
     CDS             706..2493
                     /locus_tag="QF359_00240"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO85366.1"
                     /translation="MGKVNVDATTIATVWHGMQTICKEMRYIVDRTAQNYLIAQLHDV
                     SVGIWGADGSTIAVPVGLPVQFLGTQFAVQDLIKKFGDDIKPGDLFLTNDPYHGGHNC
                     HLPDWGFFRPIFYEDELLFFTLCRAHQQDTGGAFPGGYFPDGYDIHAEGICIPPVKVH
                     EEGVEQTSILELIWNNVRWPEGTKIDNYAMIGATKMSEKRIIGLLDRYGKDTVMSCVD
                     EMLKRTERAVRKEIRKIPDGTYHGAAATDDDGSVLDVPVWVRVAVTVKGEKMTLDFDG
                     SDPQQKGFINSVYATTYANAIAAVVLCLDPALADYHNQGTMEPITVRTPEESVVNCVY
                     PATTGASPVNVGVQVMEAVLEACSKARPDRSVASWGKHRGDYVFAVDPRTGERYVRTS
                     FDYDGGAGAVWGYDGYQGVSCLTAMGAVNRGDVEEMEARLPWHLIKYEMVTDFTGNGR
                     WRGGPGVHWEALNEGTDGQVSTGSSDGDEVMGFGAVGGGASPQSRTYLVRNGEKIRLK
                     PHRRVVIKNGDIMLKHSSGGGGVGDPAKRDPHMVQEDVENELVSIKEAKSVYKVAINP
                     NTLEVDMAKTKKLRANIRKKNKTKKRSAA"
BASE COUNT          735 a          644 c          724 g          647 t
ORIGIN      
        1 gtttccttgc tgattacctc gatatcccga ccgttatcat tccgcccgtc gctgctctat
       61 tcagtgcttt cggcatgttc gccatggacc tcggtcagga cttcgctcgt tcttatatcg
      121 cacgtataga aagcgctaat attagagaca tcgctaatct ttataaggaa atggagtcag
      181 aagcttttga aaccttcgct gtccacggag tttctaagaa ggatataacc ctccagcgaa
      241 ctgcagatat gcgttatatc ggccagttca tggaagtcga aacagaactt caaaacggca
      301 ctttaacaaa aaaaatccta cacgccggtg ccgaggcgtt cggcaagaag catgaagcgc
      361 tttatacatt ttcaatgccg tggaaaggtg ttgagattct cactttaaga cttaaggcga
      421 gcgccgataa agcaccgttc cacctgccaa agattaaaag aggaaaagcc aatccgtccg
      481 ccgcgttgaa acggaaacga atggcatggt ttcagggtaa gaggctaaaa accccggtat
      541 atgatggcgc tctggtacgg gcgggaaata agatcccagg gcctgctatt attgaggaat
      601 caacgaccac ggtcgtcatc ccggaaagct atacctgccg ggttgatggg cacaagaatt
      661 acattttgac gcgcaactag aattttaaaa acggaggatg tatcgatggg gaaagtaaat
      721 gtcgatgcaa cgactatcgc cacggtgtgg cacggtatgc agaccatctg taaggaaatg
      781 cgttacattg tggatcgcac ggcccaaaat tatctaatcg cccaattgca tgacgtgtcg
      841 gtgggaattt ggggcgccga cggttccacc attgcggttc cggtgggatt gcctgttcag
      901 ttcctaggca ctcaattcgc tgtgcaggat ttgataaaaa agtttggcga cgatatcaaa
      961 ccgggtgatt tgttcctcac gaacgatccg taccatggtg gtcacaactg ccatcttccg
     1021 gactgggggt tcttccggcc catcttctat gaagatgaac tattgttttt caccctttgc
     1081 cgcgcccacc agcaggatac gggtggcgct ttcccaggtg gttatttccc tgacggctac
     1141 gacatacacg cggagggcat ctgcattcca cccgtgaaag ttcatgaaga aggtgttgag
     1201 cagacctcaa tattagaact tatttggaat aatgtgcgtt ggcccgaggg tactaaaatt
     1261 gacaactatg caatgatcgg tgcgacgaaa atgtcggaaa aaagaatcat cggactgctg
     1321 gaccgttacg gtaaagatac agtgatgtcc tgtgtggatg aaatgctcaa acggactgaa
     1381 cgcgccgttc gtaaggaaat cagaaaaatt ccagatggca cttatcatgg cgctgcggcg
     1441 accgatgatg atggttccgt gctagacgtg cccgtttggg tgcgggtcgc ggttaccgtt
     1501 aagggtgaaa aaatgactct tgatttcgat ggcagcgatc cccagcagaa agggtttatc
     1561 aacagcgttt acgcgaccac ctacgcaaac gccattgcag cggtggtcct atgccttgat
     1621 ccggcactgg cggattacca taatcaaggg accatggagc cgattacagt cagaacacca
     1681 gaagagtcag tagtcaattg tgtctatccg gcaaccaccg gcgcctcgcc ggtcaatgtg
     1741 ggtgttcagg taatggaggc agtgttggaa gcatgctcta aggcccggcc tgatcgctcc
     1801 gtcgcgtctt ggggaaaaca ccggggtgat tatgtattcg ccgtcgatcc tcgaaccggc
     1861 gaacgttacg tgcgtacttc cttcgattac gacggtggtg ctggcgccgt atgggggtat
     1921 gacggatatc aaggcgttag ctgcctgacc gccatgggag ccgtaaaccg cggcgatgtc
     1981 gaggaaatgg aggcacgtct tccctggcac ctaataaaat acgaaatggt tactgacttc
     2041 accggcaacg ggcgctggcg cggcggccca ggcgtccatt gggaagcgct taatgaggga
     2101 accgatggtc aggtctcaac tggcagctcc gacggagatg aggttatggg ttttggcgct
     2161 gtcggtggtg gggcctcgcc ccaaagccgc acttatttgg tacgtaacgg agagaagatc
     2221 aggctcaagc ctcatcgtcg cgtggtgatt aaaaacggtg acatcatgct taaacattcg
     2281 agcgggggtg gaggcgttgg cgacccggcc aaacgtgatc ctcacatggt gcaagaggat
     2341 gtggaaaatg aacttgtttc tattaaagag gccaaatccg tctacaaagt tgccatcaat
     2401 cccaatacct tggaagttga tatggcgaaa acaaaaaaac taagagcaaa catccgaaag
     2461 aaaaataaga cgaaaaaaag atcagcggca taacagcgtc cgaccaaatc gtccgacgcg
     2521 taaattctta ttaagtttcc accgccaaaa aaaacctcca tgttatcgct ctcctctaag
     2581 ggaggtaagg tcattcataa cggtatgatg ttacaccctg tgtgaaacga atcttttaaa
     2641 caccattctt tatggtaact tcggtatatg atgacataac catgaccgaa tttgaggtgc
     2701 ttattttcaa cacggtatcc acactaacaa aaactagttc agatcggtgg
//
LOCUS       DASCNL010000023         1631 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000053087, whole genome shotgun sequence.
ACCESSION   DASCNL010000023 DASCNL010000000
VERSION     DASCNL010000023.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000053087"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            333..1052
                     /gene="ftsE"
                     /locus_tag="QF359_00245"
     CDS             333..1052
                     /gene="ftsE"
                     /locus_tag="QF359_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HJO85367.1"
                     /translation="MAEVVRFENVGLRYGLGPEVLHDITFGLEASSFHFLIGPSGAGK
                     SSLLRLMYLADRQTRGLISLFGRDVSTLPREQFPKIRRSIGVVFQDFRLLPHLSAFDN
                     VALPLRVAGVRESEIRRHVEELLVWVALENHMDVRPPTMSGGQQQRVAIARAVIARPK
                     ILYADEPTGNVDDRIADRLMHLFEELNRLGTTVVIATHNEAIVQEFGWPVLKIDNGRL
                     KIIPTDEPNPVNLTKAGEVID"
     gene            1052..>1631
                     /locus_tag="QF359_00250"
     CDS             1052..>1631
                     /locus_tag="QF359_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein"
                     /protein_id="HJO85368.1"
                     /translation="MFFRQSNLALEKDDTNRFLPWLIAFMVLLAALSVAGLLMLNQIS
                     SAFEHGIRDTMTIQIPAGENSGADEIHVRKALAALKQVDGVLSSKHIASAEISDLLKP
                     WLGETADSDGLPLPQIIDVEVDRSSDLSAKKLTELVAPIIPGTTVDNHSIWLTSLVDT
                     LRSTELIATAVVLLITLATIGTVVFTTRTGMGI"
BASE COUNT          404 a          395 c          426 g          406 t
ORIGIN      
        1 acttgtggcg gcatggcaaa ttgagatagt gatacatatt gaacgggaac gtaatgcgct
       61 tgcggttgat gaacctctgg atattgatgc caggtatgac tgcaattata acaacgaacg
      121 gcccgaccac ccgttccgat cattgtaccg tcgacgctaa aagatgtcga acatgaagga
      181 caagaaatat acattgggat ccattgtcat tacgccattg atacttatag aaaaatgcgg
      241 ttctgaacac aagcggcgct ggacgaaagg gcaaatagca tgtcattctg gggccaatta
      301 atcaaaactc ttgaggatca caaacctgaa acatggccga agttgttcga tttgaaaatg
      361 taggattgcg ctacggatta gggccggaag tgctgcatga tatcactttt ggccttgaag
      421 cgagctcgtt tcatttcctg ataggcccca gtggcgctgg aaaatcgtca cttttgcggc
      481 tgatgtatct cgccgatcgt cagacccgtg gattgatttc cctgttcggg cgagatgtct
      541 cgaccttgcc acgcgagcaa tttcctaaga tccgccgaag cattggtgtc gtatttcagg
      601 actttcgatt actgccccat ttgagtgcct ttgataacgt tgccttgccg ttgcgggtag
      661 ctggagtgcg cgaatcggaa attcgccgcc atgtcgaaga gctgctggtt tgggtcgcct
      721 tggaaaatca tatggatgtt cgtccgccaa cgatgtccgg tggccaacag caacgggtcg
      781 ccattgcgcg agcggtaatt gcccggccca aaatccttta tgccgatgag ccgaccggta
      841 atgtcgatga ccggatcgcc gaccggctga tgcatttatt tgaagagctc aaccggcttg
      901 gcaccaccgt cgtgatcgct acccataatg aagccatcgt ccaggaattc gggtggccag
      961 tgttgaaaat cgataatggc cggttgaaaa taatcccgac agatgaacca aatccagtga
     1021 atttaaccaa ggcgggagag gtaatcgatt gatgtttttt cgccaatcca atctcgcctt
     1081 ggaaaaagac gataccaacc ggttcttacc ttggctcatc gcctttatgg ttttactggc
     1141 cgccctttcg gtcgccggac tattgatgct caatcaaatt tcaagtgcct ttgagcacgg
     1201 tataagggac accatgacga tccaaatacc ggctggcgaa aatagcggag ccgatgagat
     1261 acatgtcagg aaagcgctgg cagcgttgaa gcaagttgac ggggtgttgt cttcaaagca
     1321 catcgcctct gccgagatta gtgatttgct gaaaccgtgg ctcggtgaga ccgccgattc
     1381 tgatggctta ccattgccgc agatcattga tgtcgaagtt gatcgaagct cggatttgag
     1441 tgccaaaaaa ttaactgaac tcgtggcgcc gatcataccc ggcacgaccg ttgataatca
     1501 tagtatctgg ttgaccagtc tagtggatac gttgcgctca accgagctca tcgccacagc
     1561 tgtcgttttg ctgataacgc tggcgaccat cggcacagtc gtttttacca cccgcaccgg
     1621 catgggcatc c
//
LOCUS       DASCNL010000024         1110 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000056358, whole genome shotgun sequence.
ACCESSION   DASCNL010000024 DASCNL010000000
VERSION     DASCNL010000024.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000056358"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="QF359_00255"
     CDS             complement(<1..295)
                     /locus_tag="QF359_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO85369.1"
                     /translation="MLADGSGVISRPDETVIQELVEELQTTFGDRVSTSIAVREHHAR
                     DFSFHKLVPADAVVMARSTEEVVEIVKACAKRGVPIIPFGTGTSAEGHLTALHG"
     gene            442..627
                     /locus_tag="QF359_00260"
     CDS             442..627
                     /locus_tag="QF359_00260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85370.1"
                     /translation="MPTSIKKIIRPSPLQLGMICGLLLALLWIAIDTKAEAIGEINTT
                     ANNIAIEGYDSVAYFTQ"
     gene            817..978
                     /locus_tag="QF359_00265"
     CDS             817..978
                     /locus_tag="QF359_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85371.1"
                     /translation="MNDKLYLNLTHGINNAWINIGQRGIKSGDRYWPGIVKKLMPKDK
                     DGKRPYWNN"
BASE COUNT          297 a          287 c          269 g          257 t
ORIGIN      
        1 cgccatgaag cgccgtcaga tggccctcag ccgaggtgcc ggtgccaaag ggaataatcg
       61 gcacgcctcg tttggcgcag gctttgacaa tctcaacgac ctcctcggtc gagcgcgcca
      121 tcaccaccgc atcggccggt accagtttat gaaaggaaaa atcgcgggca tgatgttccc
      181 gcaccgctat tgacgtcgac acccgatcac caaaagttgt ttgcaactct tcaacgagtt
      241 cctggattac agtttcgtca ggccgcgaaa ttacaccaga accatctgcc aacatggggg
      301 gaggtgctcc tcactcaata ttttgggtgc gctataatgc tgaatattat ggtttcctgc
      361 aatctcctaa aatagcgcaa gtgtgattcg cacgtgatca agctcaggcc tatccttctg
      421 tcattaggaa ggaggtatcc gatgccaaca tccattaaaa aaatcatccg gccaagcccg
      481 ctccaattgg gtatgatttg tggcctgtta ctggccttgc tgtggatcgc aatcgatacc
      541 aaagctgaag cgattggcga gattaacacg acggccaaca atatcgccat tgagggttat
      601 gacagcgttg cctatttcac tcaataaaag gcggtgccag gcagattgga atttttctat
      661 cgctggaaaa acgccatttg gcagttggcc agcgcccagc accggaacat gtttgccaat
      721 aatccggaaa aatttgcgcc gcaaaatggc ggctactgag cttggggtgt cgcccacggg
      781 tatgccgatg gcatcaatcc ggaggccttt gtcttcgtga atgacaagct ttatctcaat
      841 cttacccacg gcattaataa tgcctggatt aatatcggcc agcgcggcat caaatcgggc
      901 gaccgctatt ggccgggcat cgttaaaaaa ctaatgccca aagataaaga cggtaagcgc
      961 ccctattgga acaactgatt taacactgat aggtaattat tcctgctgcc gggtttccct
     1021 gatggcgata tagataccac tggcaatcac aattgctatg ccggcaatgg aaacggcatc
     1081 tggaaaatcg ccaaaaaaca aatagccaaa
//
LOCUS       DASCNL010000025         2180 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000059301, whole genome shotgun sequence.
ACCESSION   DASCNL010000025 DASCNL010000000
VERSION     DASCNL010000025.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000059301"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="QF359_00270"
     CDS             complement(<1..315)
                     /locus_tag="QF359_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85372.1"
                     /translation="MDNGLFRITPSGRAGLLFALFAFFVLPAVVGGQWLKIFTSTGCF
                     VLAISGVAFMYARLGMVSLTQVGLMGVGGWVVLRLNHAFDLPFELNFLAAGVITSGFG
                     MIL"
     gene            complement(319..1275)
                     /locus_tag="QF359_00275"
     CDS             complement(319..1275)
                     /locus_tag="QF359_00275"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO85373.1"
                     /translation="MQNFKHLNWMIYLIAMVAIILFLGSGKPIMIVGLFFVSGLAIGS
                     LYALGGIGMVVLYRATGVLNFANGAAGAAGVMLAWQLADWGIWGPFTWFVAIFVALII
                     SLAYGRLIAPLLAWREPVVKAVATLGFALIILGIVSFIWEDDPRKFALPSDKIGVYIL
                     GLRVTVTRLIAFAASICIVIGIYFYLYHTKVGLQMRSLANDRDLSALLGVPILKVETI
                     AWGISGVIAGFTGLMFGDLIRLEPFVITFMVIPSIAAAVCGRLDNLILVLIGGLSMGV
                     IESLLTLSQVFKGVRPIAPFVIAAVVLLWYQRGRRLTFSGTD"
     gene            complement(1353..>2180)
                     /locus_tag="QF359_00280"
     CDS             complement(1353..>2180)
                     /locus_tag="QF359_00280"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85374.1"
                     /translation="CFESSNIVSTNQGPLPSNLGATQYAQEELGSKNVGCIGLNIPNN
                     GPWSCKASIDLMKARGGSGSMALLNPGAPDVNSALLEIISNGADTVLVNLPSGMAIAV
                     LKAAEEQDLRDKFVWIAPTPLYDLSVPKALGKYWDGKVYVNAELAPFQVGGPDAKNWK
                     AVMDAYAKPEDPRDTFAQSGYLSATFFVKMMLAMNPKDIDNRAKVTQAIKNISGYRSD
                     LMCGPYYVGDSDFHMPNHAGYMVQIINGGFKIVRKCYEFDSAYFKPHIAIEKKLGLR"
BASE COUNT          701 a          544 c          452 g          483 t
ORIGIN      
        1 caggatcata ccgaacccag aagttatgac cccggcagca agaaaattga gctcaaacgg
       61 tagatcgaat gcatggttta aacgcagcac tacccaacca ccaacaccca tcaaacctac
      121 ttgggttaaa ctgaccatgc ctaagcgggc atacataaat gcaacacccg agatggctaa
      181 aacaaaacag ccggttgagg taaaaatctt tagccattgc cctccgacaa cggctggcaa
      241 aacaaagaaa gcaaaaagcg caaagagcaa accagcgcgg ccggatggtg tgatgcgaaa
      301 aaggccgtta tccatcgact aatccgtccc actaaacgtt agtcgacgac cgcgttggta
      361 ccacagcaaa acaactgcgg cgataacaaa aggagctatt ggtcgtacac ctttaaaaac
      421 ctgtgataaa gtaagtagcg attcaatcac tcccatcgac aggccgccaa ttagcaccag
      481 tattaaatta tcgagccgac cgcagaccgc agcggcaata gatggaataa ccatgaaagt
      541 gatcacaaat ggctccaatc gaatgagatc gccaaacatt agacctgtaa aaccagcgat
      601 cactcctgaa ataccccagg cgattgtttc aacttttaaa attggcaccc ctaggagcgc
      661 cgacaaatct cggtcattgg cgagcgaccg catttgtaaa ccaactttgg tgtgataaag
      721 ataaaaataa attccgatga cgatacagat cgaggcagca aaagcgatca acctggtcac
      781 agtcacccgt aaacccaaaa tatacacacc aattttgtca gacggtaatg cgaattttcg
      841 agggtcgtcc tcccagataa agctgactat ccccagaata atcaaggcaa aaccaagcgt
      901 agccacagct tttactaccg gctcacgcca agccaaaagg ggcgcaatta atcgtccata
      961 ggctaaggaa ataatgagtg cgacaaatat agcgacaaac caagtaaaag gtccccaaat
     1021 accccaatcg gcgagttgcc aggctaacat gacgccagca gcgccggcgg cgccattggc
     1081 aaaattcaat accccggtgg ctcgatacag gactaccata ccaatgccgc caagcgcata
     1141 aagtgagccg atcgccaagc cggatacaaa aaataaccca acaatcatga tgggtttacc
     1201 cgaccccaag aaaaggataa tcgcgaccat cgcgatcaga tatatcatcc agttcagatg
     1261 tttgaaattt tgcatcaaaa catcgcctgc tgcttaaatc aaacgcccgc tgagaaactc
     1321 agcgggcgtt tgattgtgga ttgaaaatca gatcagcgca agccaagctt cttttcaatt
     1381 gctatatgtg gtttgaagta tgcgctgtca aattcataac atttacgcac aattttaaat
     1441 ccaccattaa taatttgtac catgtaacca gcatggtttg gcatgtggaa atctgaatcg
     1501 ccaacataat agggcccaca catcaaatct gatctatagc cggaaatatt tttaatcgct
     1561 tgggttactt tggcgcgatt atcaatatct ttaggattca tagccaacat catttttaca
     1621 aaaaaagtag ccgataaata accggactga gcgaatgtat cgcgaggatc ttccggtttg
     1681 gcgtaagcat ccattacagc tttccaattt tttgcgtcag gtccaccaac ttggaaagga
     1741 gccaattcgg cgtttacata aactttgcca tcccaatatt taccaagtgc cttgggcaca
     1801 gacaaatcat aaagtggcgt tggcgcaatc catacaaatt tgtcacgcaa atcttgctct
     1861 tcggcagctt tcaaaaccgc tattgccata ccagaaggca aattcaccaa gacggtgtca
     1921 gcgccgttag aaataatttc aagcaaagcg gagttcacat ccggtgcacc gggattgagg
     1981 agcgccattg agcctgagcc accacgtgct ttcattaaat cgatacttgc tttgcaagac
     2041 catgggccat tatttgggat gttcaaccca atgcagccga catttttaga cccaagctct
     2101 tcttgagcat attgcgttgc accgaggtta gacggtaatg gaccctggtt tgtcgaaaca
     2161 atgtttgagc tttcaaaaca
//
LOCUS       DASCNL010000026         1531 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000060109, whole genome shotgun sequence.
ACCESSION   DASCNL010000026 DASCNL010000000
VERSION     DASCNL010000026.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000060109"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="QF359_00285"
     CDS             complement(<1..563)
                     /locus_tag="QF359_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008036677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2'-deoxycytidine 5'-triphosphate deaminase"
                     /protein_id="HJO85375.1"
                     /translation="MADDTTIAVADIKLAAGILPSQEMDAAIASGAITAVNPIPGGQV
                     QPASIDLRVGTVAYRVRASFLPGSQATVDEKLKAFTMHAIDLSQGAVLEKGCVYIVPL
                     QESLNLTPETSGMANPKSSTGRLDIFTRVITDGAFEFDRIEAGYKGPLYAEISPLTFS
                     VLVRAGSRLSQLRLRRGQFDIADGVAFT"
     gene            complement(644..1312)
                     /locus_tag="QF359_00290"
     CDS             complement(644..1312)
                     /locus_tag="QF359_00290"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJO85376.1"
                     /translation="MGEIIKLTASDGHTLSAYKAAPDGTPKGGVVVIQEIFGVNEHIR
                     DVADGFATEGYLAIAPALFDRTERGVELGYGPDDREKGMVTRGLVDWDDTVKDTIAAK
                     KAVASAGKVGIVGYCYGGTVAWLGACKGGFDAASGYYGGGIHQNLDLNAGCPVELHFG
                     SEDQGIPLENVDLIRDAKPDVAIYIYDGAGHGFVCDPRPSYDPEATKTARARTLEFFN
                     QHLG"
BASE COUNT          376 a          436 c          385 g          334 t
ORIGIN      
        1 gtaaaggcaa ccccgtcggc gatgtcaaat tgaccgcgcc gcaagcgcaa ttgtgagagc
       61 ctcgagccgg ccctcaccag cacactgaag gtcagcggcg atatttcggc ataaagcggg
      121 cccttgtagc cggcttcaat gcggtcaaac tcaaaagcgc catcggtaat tacccgggta
      181 aaaatatcaa gcctgccggt tgagcttttg gggttggcca tgcccgaagt ttctggtgtg
      241 aggttcaagc tttcctgcaa aggcactata tagacacagc ctttttccaa aacggcgcct
      301 tggctcagat cgatcgcatg catggtaaag gctttaagtt tctcatcgac ggtggcttga
      361 gagcccggca gaaaacttgc gcgcacccgg taggcaaccg tgcctacgcg tagatcaata
      421 ctcgccggct gcacctggcc acccggaatt ggattaaccg cagtgatcgc tccactggca
      481 atcgccgcat ccatttcctg cgacggcaaa ataccggcag ctaattttat gtcagcaaca
      541 gcgatggtgg tgtcatcagc cataaaggac gactttcaga atcgaagaaa tgatgatctt
      601 caataccaaa atttatcacc cccctcaact cattgccgcg ccatcagccc aggtgctggt
      661 tgaaaaactc gagtgttcgc gcccgcgcag tcttggtcgc ctccggatca tagcttggcc
      721 ggggatcaca gacaaagccg tgaccggcgc catcatagat atagatcgcg acatccggct
      781 tggcgtcacg gatcagatca acattttcaa gcggaatgcc ctggtcttct gagccgaaat
      841 gaagttcaac tgggcagccc gcattgagat cgagattttg gtgaatgccg ccgccgtaat
      901 agccggaagc tgcatcaaag ccgcctttac acgctcccag ccaggccaca gtgccgccat
      961 agcagtagcc gacaatgcca accttaccgg cactggcaac cgcctttttg gcagcgatgg
     1021 tgtctttaac cgtatcatcc caatcaacca gtccccgggt caccatacct ttttcccggt
     1081 cgtccggacc ataacccagt tcaaccccgc gttcagtgcg atcaaacaaa gccggagcga
     1141 tagccaaata accctcggtg gcaaagccgt cggcaacgtc ccggatgtgc tcgttgacac
     1201 caaaaatttc ctggatgacg acaacgccgc cttttggcgt gccatccggc gcagctttat
     1261 aggcactcaa agtatgacca tcgctggccg ttagtttgat aatttctccc atgatgaatt
     1321 ttttcctaaa aattggttat tgttggtaca aagatgccgg ggggaaaggg gggagtcaat
     1381 tcattgataa gtgataataa cgccagacgg tctgtaagcc gggttctgta cgctctcacc
     1441 cgaagatgag aggtgatgac cattcatctg ggactttcgt taccgaacgc ctcatgcgac
     1501 cgacccggat aacggcgcga aaacccgcct a
//
LOCUS       DASCNL010000027         1568 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000061104, whole genome shotgun sequence.
ACCESSION   DASCNL010000027 DASCNL010000000
VERSION     DASCNL010000027.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000061104"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..253
                     /locus_tag="QF359_00295"
     CDS             <1..253
                     /locus_tag="QF359_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85377.1"
                     /translation="DKSILWVLPGIVSLIIFAALLTRIDAAFAGRAFAAYGGVYIMAS
                     LAWLWRIEGMRPDRWDLIGGAICLIGAAVIIFGPRGTIA"
     gene            complement(250..>1568)
                     /locus_tag="QF359_00300"
     CDS             complement(250..>1568)
                     /locus_tag="QF359_00300"
                     /EC_number="1.8.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF016838.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0019645 - anaerobic electron transport
                     chain [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DmsC/YnfH family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HJO85378.1"
                     /translation="RCIGCASCAVACPYQARTIVHKQEYYYGEQTIQEEAVAHKDRFG
                     VAQKCTFCIDRIDEGLAVGLKPGVDPEVTPVCAASCISAAIQFGDFNDPTSEVSRLVN
                     ERDYFQMHPELGADPQIKYLVETPAVPGRAPVEDELGDEALSDLEHALVGRRQTFWDM
                     RAAMNFIMGGIGSGAVVMAYFLSFFLKNFEDWYLVNINIGAGVIMAIGLFFVWLKIGR
                     KLRAPFAILRPQTSWMSREIYAVGVFYLAVFADFFQPNPVFHGIAALGALGFLYCQGR
                     ILHACKGIPTWRVAQMPTMLVATGLLEGTALLTLIFSKWGDQLPSPVAVPVLGMLLVL
                     VNAYLWRRYIGNAKIWGIGPIDRRILGVITPKLHIIAHVLPFILFGTLLVNAEVPIWV
                     AAGFFTIAGGVLWKAVIITRACHQQNYALAKYPHRGSGKFAAPIKI"
BASE COUNT          420 a          418 c          404 g          326 t
ORIGIN      
        1 cgataaatcg atcctttggg tattgccggg tattgtgtca ttgatcatat ttgccgctct
       61 gctgacccgc atcgatgcag cttttgccgg acgcgcattt gccgcttacg gcggcgtcta
      121 tatcatggca tcgctggcct ggttgtggcg gatcgaaggt atgcggcccg accgctggga
      181 tttaatcggt ggggcgatct gcctgattgg cgctgcggtc attatttttg gcccgcgggg
      241 aacgattgcc taaatcttga tcggagcggc gaatttaccc gaaccgcgat gcggatattt
      301 agccaaagcg tagttttgct gatgacaggc acgcgtaatt atgacagctt tccacaatac
      361 gccaccggcg atagtgaaaa agccggcagc cacccaaatt ggcacctcgg catttaccag
      421 caaggtgcca aataagataa acggcagcac atgggcgata atatgcagct tcggtgtaat
      481 aacgccaaga atacgccggt caatcggtcc aataccccag attttggcat tgccaatata
      541 acgccgccac agataagcgt tgaccagcac cagcaacatg cccagcaccg gtacggcaac
      601 tggcgagggt aattgatcac cccatttcga gaatatcagc gtcaacagtg cggtgccttc
      661 cagcaagcct gtggcgacca gcatcgtcgg catttgggca acccgccaag ttggaatacc
      721 tttgcaggca tgtaaaatgc ggccctggca atagagaaag cccaaggcac ccaaggcggc
      781 aatgccgtgg aatacggggt tgggctgaaa gaaatcggca aagactgcca gataaaacac
      841 accaaccgca taaatttccc tcgacatcca agaggtttga ggccgcaaga tggcaaaggg
      901 cgcacgtaat ttacggccga tcttaagcca gacaaaaaac aagccaatag ccatgatgac
      961 gccggcgccg atattaatat tgaccaggta ccaatcttca aagtttttta agaagaaact
     1021 caaaaaatac gccataacga cagcgccaga gccaatgcca cccataataa agttcatcgc
     1081 cgctcgcata tcccagaagg tttggcgccg accgactaaa gcatgctcca gatcagacaa
     1141 cgcttcatca cccaattcat cttcgacggg cgcacggccc ggcacagcag gggtttcaac
     1201 taaatattta atctgagggt cggcacccag ctcaggatgc atttggaagt aatcccgttc
     1261 gtttaccaaa cgggagacct cacttgtcgg atcattgaag tcgccgaact gaatggcggc
     1321 ggaaatgcaa gacgctgcgc aaacaggcgt gacttcggga tcaacgcccg gtttaagccc
     1381 aacggccaat ccctcatcaa tccggtcgat acagaaagtg catttctgag caacgccaaa
     1441 gcgatcttta tgggcgacgg cttcttcctg gatggtctgc tcgccgtaat aatattcctg
     1501 tttatgaacg atggtccgcg cttgataggg gcaagcgaca gcgcaagagg cgcaaccgat
     1561 gcagcgat
//
LOCUS       DASCNL010000028         2628 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000062354, whole genome shotgun sequence.
ACCESSION   DASCNL010000028 DASCNL010000000
VERSION     DASCNL010000028.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2628)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2628)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000062354"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="QF359_00305"
     CDS             complement(<1..666)
                     /locus_tag="QF359_00305"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO85379.1"
                     /translation="MDQIADNLIFGFSTLLGWQPILIIIGGVIIGIMVGAMPGLSPST
                     GVALLVPFSYTMSPALAVILLVSIYISSNYGGSITAVLINTPGTPAAAATAIDGYPMT
                     LKGEAGKGLGMSLIASTIGGIFGVIILIVFAVPLAKLAISFHPADYFALAIFGLTTVG
                     SLGGGNVSKAMVAVLFGLIINTVGLDPISGVSRYSFGIDQLYDGFSLIPALIGLFALS
                     VVFT"
     gene            complement(712..2205)
                     /locus_tag="QF359_00310"
     CDS             complement(712..2205)
                     /locus_tag="QF359_00310"
                     /inference="COORDINATES: protein motif:HMM:NF013543.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HJO85380.1"
                     /translation="MEIVILLFLTSGLFLGWSLGANDAANVFGTAVGTRMVQFTTAAI
                     VCSIFVILGAVISGAGAAHTLGKLGSVNALAGSFVAAFSAALTVYWMTRASLPVSTSQ
                     AIVGAIIGWNLFSGSITDSNALFKILGTWVACPLLAGLIAAPLYKLTQRILKWAQFHL
                     LRLDAYTRAALIFAGAFGSYSLGANNIANVMGVFLPVSPFTDFDLGGFATFTGTQQLF
                     LIGAIAIGVGVFTYSKRVMLTVGDGLMPLSPVAAWVVVIAHSIVLFLFASEGLENLLA
                     NAGLPTIPLVPVSSSQAVVGAVVGIGILKGGKNIDWKILGNISAGWVTTPIISAVVCF
                     VALFFVQNVFNQQVFREVSYSLTPTAMERVVEMGLPAEDLKVIEGKTYNNASAFRAAV
                     LEQTLLSKSQETKVLYYAEIFHTKITPSKLTKSDREWLGEERVKILDSLGGKSFAYKW
                     QLSDALSRDSDQWKLLEQITVNKVYNKQINSRLDFVYRTFSVIERPR"
     gene            complement(2218..>2628)
                     /locus_tag="QF359_00315"
     CDS             complement(2218..>2628)
                     /locus_tag="QF359_00315"
                     /inference="COORDINATES: protein motif:HMM:NF013982.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HJO85381.1"
                     /translation="RADVLRLLEDLDNLINITQANCYRFAVEAPEIPEEYHAEFLHLT
                     ETVVACVDAVVMSSRAFFRNIEAVRDHNSKVMFYETEADKISSKLKVMAFSSDLPKVE
                     KIHLRYFIERIDELANEAEDIADALAIYTIKRSI"
BASE COUNT          789 a          655 c          587 g          597 t
ORIGIN      
        1 cgtgaaaacg acacttagag caaacagacc aattaacgcc ggaatcaggc taaatccgtc
       61 atacaattga tcaatgccaa acgagtaacg cgaaacacct gaaataggat cgagtccgac
      121 ggtattgatg atcaagccga acagcacggc gaccattgct tttgaaacgt taccgccacc
      181 caatgaaccg accgtcgtta ggccaaaaat cgccaatgcg aaatagtccg ccggatggaa
      241 actgatcgct agttttgcca acggtacggc aaaaacgatg aggataataa caccaaaaat
      301 accaccaatc gtcgatgcga tcaaagacat gccaaggcct ttgccggctt cgccctttaa
      361 ggtcatcgga tagccgtcga tagcggtagc cgctgccgct ggcgtgcctg gcgtatttat
      421 cagcaccgcc gtaatggaac cgccgtaatt ggaggatata taaattgaga ctaaaagaat
      481 taccgccaag gcaggtgaca tggtgtagct gaaaggaacc agcaaggcga ccccggttga
      541 cggtgaaagg ccaggcatcg caccaaccat aatgccaata ataaccccac caatgataat
      601 caatatcggc tgccagccta acaaggtgct aaaaccaaaa attagattgt ctgctatctg
      661 atccatttta ctattcaccg gggcaatcag gatatttgcg attataaacc ttcatctcgg
      721 tcgttcaatg acactaaaag tccggtagac gaagtcgagc cggctattga tctgtttatt
      781 ataaactttg ttaactgtta tttgttcgag cagcttccac tgatcgctat cgcgagatag
      841 tgcatctgaa agctgccact tgtaggcaaa agatttacca ccgagactat ctagtatttt
      901 aacgcgttct tcaccaagcc actcccgatc tgatttagtg agtttgcttg gcgtaatttt
      961 ggtatggaaa atctcggcat aataaagcac ctttgtttct tgagattttg acaataatgt
     1021 ttgctcaaga acggcagcgc gaaaagcaga ggcgttatta taggtcttgc cttcaataac
     1081 tttgaggtct tcagccggca gacccatttc gaccacccgt tccattgcgg ttggtgtcag
     1141 tgaatagctg acctcgcgaa atacctgctg attaaaaacg ttttgcacaa agaaaagcgc
     1201 cacgaaacac acaactgcgg atataattgg cgtcgtcacc caacctgcac tgatattgcc
     1261 gagaattttc caatcgatat tcttgccgcc tttcaagatg ccaatgccaa cgacggcgcc
     1321 aacgacggct tgggaactcg atactggaac cagaggtatg gttggtagtc cggcattggc
     1381 taataaattt tccaaacctt ccgaagcaaa cagaaacaac acgattgaat gagcaatcac
     1441 caccacccag gcggccactg gtgataacgg catcaggcca tcgccgactg tcagcatgac
     1501 gcgcttcgaa taggtaaaga cacccacccc gatggcaata gcgccaatta gaaaaagctg
     1561 ttgggtacct gtaaatgtcg cgaaaccgcc gagatcaaaa tcagtaaatg gtgaaaccgg
     1621 caaaaacact cccatcacat tggcaatatt attagcgcca aggctataag agccgaaggc
     1681 gccggcaaaa attaacgcgg ccctggtata agcatccaat cgaagcaaat gaaattgagc
     1741 ccatttcaga attcgctggg ttagtttgta gagcggcgcg gcgatcaatc cggccaataa
     1801 tgggcaggcg acccaggtgc caagaatttt aaaaagagca ttggaatcag taatagaacc
     1861 actaaataaa ttccaaccga taatcgcccc aacaattgct tggctcgttg aaacgggcag
     1921 gctagcccgg gtcatccaat agacggtcaa agcggcagaa aaagcagcga caaaggaacc
     1981 cgccagtgcg tttaccgagc ctaatttccc caaggtatgg gcggcgcccg caccacttat
     2041 taccgcaccg agtataacga atatactgca gacaatggcg gctgtggtaa attggaccat
     2101 ccgcgtgccg acagccgtgc caaacacatt ggcagcatcg ttcgcaccca atgaccaacc
     2161 caggaagagc ccactggtca agaacaaaag aataactatc tccatcgtta gagggcccta
     2221 gatgctgcgt ttgatggtat agatggccag tgcgtccgcg atgtcttccg cctcattggc
     2281 caactcgtcg atcctttcaa taaaataacg cagatgtatt ttttcgactt tcggcaaatc
     2341 agatgaaaaa gccatcactt ttaattttga actgatctta tcagcttctg tttcataaaa
     2401 cataaccttg gaattatgat cgcggacggc ttcaatattt ctgaaaaagg ctcttgaaga
     2461 catcaccaca gcatcgacgc aggcaactac agtttccgtt aaatgcaaaa attccgcgtg
     2521 atattcttcg ggaatttccg gcgcttcaac ggcaaatcgg tagcagtttg cctgcgtaat
     2581 attaatcaaa ttgtcgagat cttccaataa ccgcagcaca tcggctcg
//
LOCUS       DASCNL010000029         2028 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000069984, whole genome shotgun sequence.
ACCESSION   DASCNL010000029 DASCNL010000000
VERSION     DASCNL010000029.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000069984"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            42..1271
                     /gene="coaBC"
                     /locus_tag="QF359_00320"
     CDS             42..1271
                     /gene="coaBC"
                     /locus_tag="QF359_00320"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014747073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HJO85382.1"
                     /translation="MESGKRVLLIISGGIAAYKSQELIRDLHRREIAVRCILTDAGSY
                     FVTPFSLAALTGDKVYVDLFSLTDESEMGHIELSRDADLVVVAPATANILAKMRTGIA
                     DDLATTTLLATDKQVMIAPAMNVRMWQHAATQENITILQERGMQVIGPEEGEMACGEY
                     GMGRMSEPALIAEAIENFFRNAGQTSEEPQKSLIGKKAIITSGPTHEAIDPVRYLANH
                     SSVRQGHAIAKALAALGAETVLVSGPTQLADPANVAVKHVQSAEDMLAACEAALPADI
                     MVCAAAVADWRVANPPQEKIKKNGVMPSLELIENPDILANVSQLAKNRPALVIGFAAE
                     TKDVVSYAQAKLAKKGCDWIVANDVSPETGTFGGENNTVHVIDAETIEDWPILSKEDI
                     GQKLAARIATYLENIPT"
     gene            1268..1726
                     /gene="dut"
                     /locus_tag="QF359_00325"
     CDS             1268..1726
                     /gene="dut"
                     /locus_tag="QF359_00325"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HJO85383.1"
                     /translation="MSRVKVSVQRLDHGKDLPLPEIQTKLSAGVDLLAAVEGNIELTP
                     GDRTIVPTGLMIALPAGFEVQIRPRSGLAIKSGITVLNSPGTIDADYRGEIGAIMINQ
                     GQETFTIERGMRIAQMVVVPVVGIEWVETDTLPETTRGAGGFGSTGTDGI"
     gene            1758..>2028
                     /locus_tag="QF359_00330"
     CDS             1758..>2028
                     /locus_tag="QF359_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HJO85384.1"
                     /translation="MLRLPKKMLFAIEAVVDIAYHATGQPVQSRDITRRQGIPRRYLE
                     QALQQLVRANLLTGVRGPRGGYNLARERRRISVGDIVHVMRNMEQT"
BASE COUNT          513 a          478 c          550 g          487 t
ORIGIN      
        1 attaattaca ccggcaaaaa gtaatttgat tggttttcca aatggaaagt ggaaaaagag
       61 ttttattgat catttcgggt ggcattgcgg cctacaaaag tcaggaattg atccgggatt
      121 tgcaccgccg tgaaattgcc gtgcgctgca tcctgaccga tgctggcagc tattttgtga
      181 cgccattttc attggctgct ctgaccgggg ataaagtcta cgtggattta ttttctctca
      241 ccgatgagag tgaaatgggt catattgagc tgtcccggga tgccgatctt gttgttgttg
      301 cgccggcgac cgccaatatt ctcgccaaga tgcggactgg tattgcagat gatttggcaa
      361 ccaccaccct cttggccacg gataagcagg tgatgatcgc tccagcgatg aacgtgcgca
      421 tgtggcaaca cgccgccact caggaaaata ttactatttt gcaagagcgc ggcatgcagg
      481 tgatcggtcc ggaagaaggc gaaatggcgt gcggcgaata cgggatggga cgaatgtcgg
      541 agcccgcttt aattgccgag gctatcgaaa atttttttcg taatgccggt caaacttccg
      601 aggagcccca aaaaagtttg atcggcaaaa aagccatcat taccagtggc cctacccacg
      661 aagcgattga tccagtgcgc tacctcgcca atcattcttc cgttcgccag ggccatgcca
      721 ttgccaaagc gctcgctgca ctcggtgccg aaactgtgct ggtatccgga ccaacccaat
      781 tggcggaccc ggccaacgtt gcagttaaac atgttcaatc agccgaggac atgctggccg
      841 cctgtgaggc tgctctgccc gccgatataa tggtgtgcgc ggcggctgtt gccgattggc
      901 gggtggccaa tccaccacag gaaaagataa agaaaaacgg cgtcatgcca tcgctggaac
      961 tgattgaaaa tccggatatt ctcgccaatg tcagccagtt ggctaaaaac cggccggctt
     1021 tggttatcgg ttttgctgct gaaaccaaag acgttgtttc ttatgcccag gctaaacttg
     1081 ccaaaaaagg ctgcgattgg attgtcgcca atgacgtgtc accggaaacc ggcacctttg
     1141 gtggtgaaaa caatacggtg catgtgattg atgccgaaac aattgaagat tggccaattc
     1201 tttcaaaaga agatatcggc caaaaacttg ctgcccgaat tgccacttat cttgaaaaca
     1261 ttcctacatg agtagagtaa aagtatctgt ccaacgtctg gatcacggta aggatttacc
     1321 attgcctgaa attcaaacca aattatcggc aggggttgat ttattggccg ctgtcgaagg
     1381 caatatcgaa ttgacacctg gagatcgcac catcgtgcct acaggcctga tgattgcgtt
     1441 gcctgccggt tttgaagtgc aaattcggcc gcgctcgggt ttagcgatta aaagcggtat
     1501 caccgtgctg aatagtccgg gtaccattga tgcggattat cgcggcgaaa ttggcgctat
     1561 catgatcaat cagggacagg aaacgttcac cattgaacgc ggcatgcgga ttgcccaaat
     1621 ggtcgtcgtt ccggtagttg gtattgagtg ggtcgaaacc gacacattgc cggagaccac
     1681 acggggtgcg ggtggttttg gttcaacagg gacggatggg atttaaaaaa ccgtaggtta
     1741 aagaaaggta tgaggaaatg ttaaggcttc caaaaaaaat gctgtttgcc attgaagctg
     1801 ttgttgacat cgcttatcac gccaccggcc agccggtgca aagccgggat atcacccggc
     1861 gtcaaggcat tccacggcgt tatcttgaac aggccttgca acaattggtg cgggcaaatc
     1921 tgttgactgg cgtacgcggc ccacggggtg gatataatct tgcgcgtgaa cgccgccgca
     1981 tatcggtcgg tgatatcgtg catgttatgc gcaatatgga acaaaccg
//
LOCUS       DASCNL010000030         3025 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000070132, whole genome shotgun sequence.
ACCESSION   DASCNL010000030 DASCNL010000000
VERSION     DASCNL010000030.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000070132"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="QF359_00335"
     CDS             <1..281
                     /locus_tag="QF359_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010506889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO85385.1"
                     /translation="CLINVARGGVVDEEALIKALNDGEIAAAGLDVFEVAPLPDESPL
                     WDMDNVFMTPFTGGRSDMYAERILAVIEPNLRAYVDGKLDQMINVVEK"
     gene            308..1510
                     /locus_tag="QF359_00340"
     CDS             308..1510
                     /locus_tag="QF359_00340"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HJO85386.1"
                     /translation="MNQMSERLNKPISTKELERRWAAIRAAMAEQGIDALLLQNNNDH
                     MGGYTKYVTDIPATNGYPMTVVFPRDDAMSQINQGSFDMERDLDVDGADGMHRGVKRL
                     LTTPSFASAPYTREYDPALACKALEPYKDGTIGLVGTYQLSFAMVDYVKRQFPNATYV
                     EASDLMDQIKVIKSEEEIEFIQGTADQQVKAMEAVIAEIKPGMKDSDVAAVALHVAHN
                     LGSEQGVYLCQSWQIGNPTAIGPRHNQDRVIQEGDSFNMLVENNGAGGFFTEIGRTIV
                     LGEATQEQHNELAFTLEVQQFSLNMMKPGTPCADIWNAYNTFMIENDRPPESRLYCHG
                     QGYEMVERPLIRKDETMNIEKNMNIVCHPGYARGDVYSWICDNYIIGDDGPGESIHKM
                     PQKIFEVG"
     gene            complement(1709..2488)
                     /locus_tag="QF359_00345"
     CDS             complement(1709..2488)
                     /locus_tag="QF359_00345"
                     /inference="COORDINATES: protein motif:HMM:NF013429.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HJO85387.1"
                     /translation="MLKFSANIGMMFNEIEAPVARIQAAQDAGFAAVELLFVYDIPIE
                     SLVAETERTGILWSVVNIAVGEGVQMGPLVAAAPGKEEAFRENLVAAKKYCAALKPAA
                     LVVPAYTPPEGVSKADALTVFKDNMRIAADEMSDLGIPVIIEALNPEHRPNSLLTTTT
                     EVMAVIEELNHPNLGMEYDAFHMYDTEGRMEETVEKYLSFIGNIQIADVPGRHEPGTG
                     EVDYDSFLNTLDRIGYDKWVALEYMPVSGTLDGLSWLDKWR"
     gene            2570..2980
                     /locus_tag="QF359_00350"
     CDS             2570..2980
                     /locus_tag="QF359_00350"
                     /inference="COORDINATES: protein motif:HMM:NF013228.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HJO85388.1"
                     /translation="MKKEIVEVPGFEMPKLPDGKPLVPLSPATKAGSFVYVSGLPPLN
                     PDTGEMVTGDIQVQTRQSLENVKRVLEAAGSSIENVLKVHVYCSNSGYFTQVNEVYRE
                     YFNENAPARNFITVGSWMMPFDIEIDCIAVENSE"
BASE COUNT          797 a          678 c          775 g          775 t
ORIGIN      
        1 cctgtctaat caatgttgca cgcggtggtg tggttgatga agaagcgctc atcaaagcct
       61 taaacgatgg cgagattgcc gctgccggtc ttgatgtttt tgaagtcgcg cccctgccgg
      121 atgaaagtcc gctgtgggat atggacaatg ttttcatgac gccttttact ggtggccgca
      181 gtgatatgta tgctgagaga attctagcgg ttattgagcc taatctgcgg gcctatgtgg
      241 atggcaagct cgatcaaatg attaatgttg ttgaaaaata acaattaaga tttaggggag
      301 taatacgatg aatcaaatgt cagaacggtt gaacaaacca atttccacca aagagttaga
      361 gcgccgctgg gctgccattc gcgccgccat ggccgagcag gggatcgatg ctttgttgtt
      421 gcagaacaat aatgatcata tgggcggcta taccaaatac gttactgata ttccggcgac
      481 caatggctat ccgatgacgg ttgtgttccc ccgtgatgac gcgatgagcc agatcaacca
      541 gggctccttc gatatggagc gcgatcttga tgtcgatggc gctgacggga tgcaccgcgg
      601 tgttaaacgt ttgctgacaa cgccgtcctt tgcatcggcg ccttacaccc gtgaatatga
      661 tccggcgctc gcctgcaaag ctttggagcc atacaaggac ggcaccattg gtttggtcgg
      721 cacctatcaa ttgtccttcg ccatggttga ttatgtaaag cgtcagtttc ccaatgcgac
      781 ctatgtggaa gcttctgact tgatggacca gatcaaagta atcaaaagtg aagaggagat
      841 cgagtttatt caaggcacgg ctgatcaaca ggtcaaggca atggaagcgg tcatcgccga
      901 aatcaaaccg ggcatgaaag attccgatgt tgctgccgta gcgctccacg tcgcccacaa
      961 tctcggcagt gagcaagggg tttatctctg tcagtcttgg cagataggca acccaaccgc
     1021 cattggcccc cgccataatc aggaccgggt gatccaggaa ggtgatagct ttaatatgct
     1081 ggttgaaaat aacggtgccg gtggtttttt caccgaaatt ggccgcacga tcgtgttggg
     1141 tgaagcgacg caagagcagc ataacgagtt agctttcaca ctggaagttc agcaattcag
     1201 cctcaatatg atgaaaccag ggacgccctg tgcggatatt tggaatgcct acaacacttt
     1261 catgattgaa aatgatcggc cacctgaatc ccggctctat tgtcacggtc aaggttatga
     1321 aatggttgag cgccccttga tccgcaaaga tgagacgatg aacatcgaaa aaaatatgaa
     1381 catcgtctgc catcccggtt atgcgcgcgg cgatgtttat tcctggattt gcgacaatta
     1441 catcattggc gatgatggtc cgggcgaaag catccataaa atgccgcaaa agattttcga
     1501 agtggggtaa agtaatatac gtcacgcaat ctggggtggc ataatcttgg ttcaaactta
     1561 cactggtatt ttaataaccc gtgcggtggt gagattgaat atttctccga tatggaccag
     1621 gtggatgaaa attgggcgac ccgttattgg gataatccgc cggtgatcga tttctggaaa
     1681 gcggaggtta cgtcgtaagc ggcttgcact atcgccattt gtcgagccag cttagcccgt
     1741 cgagagtgcc gctaaccggc atatattcca aggctaccca tttgtcatag ccaatgcgat
     1801 cgagggtatt gagaaagctg tcgtaatcca cttcgccggt gccgggttca tgtcgtcccg
     1861 gaacgtcggc aatctgaatg ttgccgataa agctaagata tttttcgacc gtctcctcca
     1921 tccgcccttc agtgtcatac atatgaaaag cgtcatattc catgccgaga ttaggatgat
     1981 tgagttcttc aatgacggcc atgacttcgg tagtggtggt gagcagagag ttgggccggt
     2041 gttccggatt aagtgcttcg atgataaccg ggatgccgag atcgctcatt tcgtccgcgg
     2101 caatccgcat attgtcttta aagacggtca gggcgtctgc tttgctcact ccttccggtg
     2161 gcgtgtaagc cgggacgaca agagctgccg gtttaagtgc ggcacaatat ttttttgccg
     2221 ccaccagatt ttctcgaaag gcctcctctt tgccaggcgc agcagcgacc agcggaccca
     2281 tttgaacccc ttcaccaacg gcgatattaa ccaccgacca taaaatgccg gtgcgttcgg
     2341 tttcggcaac caggctttca attggaatat catagacgaa taacaattca acagccgcaa
     2401 agccggcatc ctgggcagct tgaatgcgcg ccaccggggc ttcaatttcg ttaaacatca
     2461 taccgatatt ggcggaaaat ttgagcatgg atattctctc tggctagcgg acgtaaagtt
     2521 agattagtat gatcctggaa acacccaaaa aacaaacagg aattaaaaaa tgaaaaaaga
     2581 aattgtcgag gttcccggat ttgaaatgcc aaaattaccg gacggtaagc cactggttcc
     2641 gctttcgcca gcaacaaaag ctgggagttt tgtgtatgtc tcaggattgc cgccgttaaa
     2701 tccggatacc ggtgaaatgg ttacaggtga tattcaagtt caaacccggc agtcattgga
     2761 aaatgttaaa cgcgtgcttg aggctgcagg tagctcaatt gaaaatgtct tgaaggtgca
     2821 tgtatattgc tcgaactcag gatattttac tcaagtgaac gaagtttatc gggaatattt
     2881 taacgaaaat gcccccgctc gtaattttat tacagtcggt tcctggatga tgccgtttga
     2941 tatagagatc gactgcattg ccgttgaaaa ttctgaataa tggaaaaaaa ttaaaaaaat
     3001 ataattaatt acttttttta atgac
//
LOCUS       DASCNL010000031         1598 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000085587, whole genome shotgun sequence.
ACCESSION   DASCNL010000031 DASCNL010000000
VERSION     DASCNL010000031.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000085587"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="QF359_00355"
     CDS             complement(<1..218)
                     /locus_tag="QF359_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HJO85389.1"
                     /translation="MAQVDYYLEDTPETPPLDVVEQVVSNQGWRLNRMREEEMAAEYS
                     GKWCDYSLHFAWSNEFCAMHFTCAFDIRV"
     gene            complement(424..744)
                     /locus_tag="QF359_00360"
     CDS             complement(424..744)
                     /locus_tag="QF359_00360"
                     /inference="COORDINATES: protein motif:HMM:NF016280.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HJO85390.1"
                     /translation="MQTRNRFFDDLAKVANSAAGTVAGMKEEVEQLVRNRVESFIDGM
                     NLVTREEFEVARAMAAKARDEQEKLEKRIVELEAKLGTQKTKSSRKKAAPKKSSTTGK
                     AKKS"
     gene            862..>1598
                     /gene="rfaD"
                     /locus_tag="QF359_00365"
     CDS             862..>1598
                     /gene="rfaD"
                     /locus_tag="QF359_00365"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HJO85391.1"
                     /translation="MILVTGAAGFIGSNFVAALAQRGEREISVCDRRGDDDQWRNLAK
                     YELADIIEPEDLLNYLDKHKGEVNRIFHMGAISSTTETDVDLIMDTNFRLSLDLCNWC
                     VEHQVPFIYASSAATYGNGEAGFDDDGSCDGLAKLQPLNAYGWSKHLFDRRVAQMIAD
                     GARTPPQWAGLKFFNAYGPNEYHKGGQMSVVPQIYKQIQETGKARLFQSHHPEYKDGG
                     QMRDFIWVGDCVDVMLWLYENRGVSGL"
BASE COUNT          388 a          379 c          397 g          434 t
ORIGIN      
        1 acacgaatat caaaagcaca cgtgaagtgc atggcgcaaa attcattcga ccaggcaaaa
       61 tgaagcgagt agtcgcacca tttgccacta tattcagccg ccatttcttc ttcacgcatg
      121 cggtttaaac gccatccctg gttactgacc acctgctcga caacgtcgag tggtggagtt
      181 tctggagtat cttcgagata ataatcgacc tgagccatga caggagcctc cggcttaaat
      241 ggcgtcacgg gtgaggaagt aaaaaaacca gttaaaacca atataactag atgtagtgta
      301 ttactcgccc atgagtacta tcagtaggtt gccagaagcc gagtcggcgc gcaagaggga
      361 tatcggctaa caagtgattt tttctgtgga taagcgcgaa agagtaaatt aatcggagaa
      421 aatctaactc tttttggcct tgccagtagt gctggacttc ttcggtgcgg cttttttccg
      481 tgaagattta gttttttgag tgcctaattt tgcttccagc tcaacgattc tcttttcgag
      541 tttttcctgt tcatcgcgtg ccttagcggc cattgcccta gcaacctcaa actcttcacg
      601 cgtaaccaaa ttcataccgt cgataaagct ctcaacccgg ttccgcacca gctgctcaac
      661 ttcctctttc atacccgcca ccgtgccggc agcactattg gcaactttgg cgagatcatc
      721 aaaaaagcga ttacgtgttt gcatggtgct attccttaac cgtagtctca aatgggagac
      781 tttatatata ggccgcttat atgcccatcg caacttacca gtaaacttgc ctggttgact
      841 ccggcacctt ataacacggt catgattctc gtgaccggcg ccgctggctt tattggctcg
      901 aactttgttg ccgctcttgc ccagcgcggc gaacgggaga tttccgtttg tgatcgccgt
      961 ggcgatgatg atcagtggcg taatctggcc aagtatgaat tggcggatat tattgaaccc
     1021 gaggatctcc tgaattatct cgataagcac aaaggcgagg tcaatagaat cttccatatg
     1081 ggggcaatct catcgaccac cgaaaccgat gtcgatctga ttatggatac taatttccgg
     1141 ttgtcgctcg atctttgtaa ttggtgtgtt gagcatcagg tgccatttat ttatgcatcc
     1201 tccgcggcaa cttacggcaa tggtgaagca ggtttcgatg acgatggttc ttgtgatggc
     1261 ttggccaaac tgcaaccgct gaatgcctat ggttggagca agcatttgtt tgatcgccgg
     1321 gtggcgcaga tgattgccga tggcgccagg accccgccgc aatgggctgg cttgaagttc
     1381 ttcaatgcct atggaccgaa tgaatatcat aaaggtggtc agatgagcgt ggtgccgcaa
     1441 atctacaagc aaattcaaga aaccggcaaa gcccggttgt ttcagtcgca tcatccggaa
     1501 tataaagatg gcggccagat gcgggatttc atctgggtcg gcgattgtgt cgatgtgatg
     1561 ttgtggctct acgaaaatcg cggtgttagt ggcctgtt
//
LOCUS       DASCNL010000032         2549 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000088386, whole genome shotgun sequence.
ACCESSION   DASCNL010000032 DASCNL010000000
VERSION     DASCNL010000032.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000088386"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..865
                     /locus_tag="QF359_00370"
     CDS             <1..865
                     /locus_tag="QF359_00370"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HJO85392.1"
                     /translation="TDPNNLIAFQGELGANGDMACRAVRGDMETLPCHTFEETFAAVR
                     DGKAKYLMIPIDNTVAGRVADIHHLLPDSGLHIVGEHFQRVEHHLLAVKGTKLDQLTH
                     VHSHVHALNQCRNVIKDLGLEPMIHVDTAAAARDIAERCEKAHAAIASDLAGEIYGLE
                     SLCGNIEDAEHNTTRFLLMAKDALDIAPDDGDIMTSFVFRVRNVPAALYKALGGFATN
                     GINMVKLESYLVGGGFIAAQFYAEVDGHPESRGLRLALEELSFFTHEVRIMGAYPRNP
                     VRDVINKNGTE"
     gene            837..1313
                     /locus_tag="QF359_00375"
     CDS             837..1313
                     /locus_tag="QF359_00375"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJO85393.1"
                     /translation="MSSIKTALSSVNMNASSFREVNRRVVEPDMCDALGHMNIQYYFE
                     TLSDGVIKIMALLEEPIEDIPERGTAFALHKEESQFLVEIYSGDEFYMATAIEGFGKK
                     SMILQHRFFGAEDGLELFRSRFITVNMDLKARTSIAFSEEFKSLAAHEFPAYQPEN"
     gene            complement(1327..1452)
                     /locus_tag="QF359_00380"
     CDS             complement(1327..1452)
                     /locus_tag="QF359_00380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85394.1"
                     /translation="MTAPDKIQPNAEIIHSSATRILGLCEDMLAGTIVTLWFPKK"
     gene            complement(1491..1631)
                     /locus_tag="QF359_00385"
     CDS             complement(1491..1631)
                     /locus_tag="QF359_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85395.1"
                     /translation="MSKNNDTTQAFLEAKAALEKALADQGRLENEVMTKVHQFAYNIK
                     IR"
     gene            complement(1682..>2549)
                     /gene="nudC"
                     /locus_tag="QF359_00390"
     CDS             complement(1682..>2549)
                     /gene="nudC"
                     /locus_tag="QF359_00390"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: protein motif:HMM:NF001299.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000210 - NAD+ diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HJO85396.1"
                     /translation="SENLSSDPSGSQIGENLRIIPVWRSKSLIFTERQMQAAILTGHT
                     AEEVRQNATTLVFLGLKGDTIYCAADLSYADDPHSLGLPADTAFEDLRGLATSLDPID
                     AGYLAYARAIIHWHIGHKYCGICGSETAVGRGGHERTCTNPDCARIHFPRTDPAVIML
                     VTHPSEEKCLLGHNKRFRGLTYSTIAGFVEPGEMLEQAVAREVLEETNIEVVDVTYQA
                     SQPWPFPASIMLGFRARAVTTEIVCHDQELIDARWFSRDEVHEMAKGRKSLPPSNLSI
                     SRWLIDSWLFEE"
BASE COUNT          623 a          608 c          647 g          671 t
ORIGIN      
        1 tacagaccca aataatctga tcgcctttca aggtgagctt ggcgccaatg gtgacatggc
       61 ctgccgtgct gtgcgtggtg atatggaaac cttgccgtgc cacacttttg aagagacctt
      121 tgccgctgtc cgcgatggca aggccaagta tctgatgatt cccatcgata atacggtggc
      181 gggccgggtg gcagatattc atcatctgtt accggattcc ggtttgcata ttgtcggtga
      241 acatttccag cgggtagagc atcatttact ggcggtcaaa ggcactaaac tcgaccagct
      301 cactcatgtt cactctcatg tccatgcgct taatcaatgc cgcaacgtga tcaaggatct
      361 cggcctcgag cccatgattc atgtcgatac cgctgccgct gcaagggata ttgccgagcg
      421 ctgtgaaaaa gcccatgcag cgattgcgtc ggacttagcc ggcgaaattt atggcctcga
      481 atccctgtgt ggcaatatcg aagatgctga gcataacacg acgcgctttt tgctgatggc
      541 caaagatgcg ctcgatattg cgccggatga cggtgacatc atgaccagct tcgtctttcg
      601 ggtgcgcaat gtaccggcag cgctttataa ggcgctcggc ggttttgcca ccaatggcat
      661 caatatggtg aagctcgaaa gttatttagt tggcggcggc tttatcgcgg cgcaattcta
      721 cgccgaagtc gatggccatc cggaaagccg cggcctacgt ctggcgctgg aagagctgtc
      781 cttcttcacc catgaagtac gcattatggg cgcttatcca cgcaatccag tgcgcgatgt
      841 catcaataaa aacggcactg agtagtgtca atatgaatgc cagcagtttc agagaagtaa
      901 atcgtcgtgt cgttgagcca gatatgtgcg acgcgctcgg ccatatgaat atccagtatt
      961 attttgaaac tctcagtgat ggggttatta aaattatggc gcttctggag gagccaattg
     1021 aggatatacc ggaacgtggt acagcgtttg cgctgcataa agaggaatcg caattcttgg
     1081 tagaaatata cagtggtgac gaattttata tggcgactgc gattgaggga tttggcaaaa
     1141 aatcgatgat tttacaacac cggttttttg gtgccgaaga tggtctcgag ctctttcgat
     1201 cccgctttat tacggtaaac atggacttaa aagcccgcac aagtattgcc ttttccgaag
     1261 agtttaagtc tttagcggcg catgagtttc cagcttacca gccggaaaac taaacctaag
     1321 cccgcgtcat tttttcggaa accacagcgt cacgatggtg ccggcgagca tgtcttcaca
     1381 caatccaaga atgcgggtcg cagaactgtg gatgatctcg gcgttgggct gaatcttatc
     1441 cggtgctgtc atccctattt tcatcaattt agtgaggcca atcttggccg ttagcggatt
     1501 ttaatgttat aagcaaattg gtggactttg gtcatcactt cgttttcgag ccggccttga
     1561 tcagccagcg ctttttctaa agctgctttg gcctcaagaa aggcctgtgt tgtgtcatta
     1621 tttttactca tcgaaaacga taattcctca aatcagctta ccagcgttta ctatatctga
     1681 actattcctc aaacagccaa ctatcaatga gccatcttga gatcgagaga ttagacggtg
     1741 gcagagattt gcgacctttt gccatttcgt gcacctcgtc acgcgagaac catcgggcat
     1801 cgataagttc ctgatcatgg caaacaattt cagttgttac cgcgcgcgct ctgaaaccga
     1861 gcatgatgga ggcggggaaa ggccagggct gggatgcctg ataagtgaca tcaacaactt
     1921 cgatatttgt ttcttctagc acttcccggg cgactgcttg ttccagcatt tcgcctggct
     1981 caacaaatcc agcgatggtt gaataggtta ggccgcgaaa tcttttgttg tggccaagta
     2041 ggcatttttc ttcgctcgga tgagtgacca gcataatgac ggccggatca gtacgcggaa
     2101 aatgaattct ggcgcaatct ggatttgtgc aagttcgttc gtgaccaccg cggccaacag
     2161 cagtttcact accgcaaata ccacaatatt tatgaccgat atgccaatga ataattgctc
     2221 gtgcataggc cagataacca gcatcaatgg ggtcaagtga tgtggccaga ccgcgtaaat
     2281 cttcaaaagc cgtgtcggcg ggcaggccca aactatgagg gtcatctgca taagataaat
     2341 ctgccgcaca ataaatagtg tcgcctttaa gtcccaaaaa caccagtgtg gtggcatttt
     2401 ggcgaacttc ctcggcggta tggccagtta ggatggcggc ctgcatttgc ctttcggtga
     2461 agatcaggct cttgctgcgc caaaccggaa tgattcgcag attttcacct atctgactgc
     2521 cggatggatc acttgacaga ttttctgac
//
LOCUS       DASCNL010000033         1324 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000088870, whole genome shotgun sequence.
ACCESSION   DASCNL010000033 DASCNL010000000
VERSION     DASCNL010000033.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1324)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000088870"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(145..405)
                     /locus_tag="QF359_00395"
     CDS             complement(145..405)
                     /locus_tag="QF359_00395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85397.1"
                     /translation="MAKRSGGLGLRRGFNFARLDGAFGLGFALSLGFGLGFGFGFALS
                     LGFGFSFGLGLGFGFSFGLGLGFGFGFASTLGFGFGFGFGFA"
     gene            443..886
                     /locus_tag="QF359_00400"
     CDS             443..886
                     /locus_tag="QF359_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85398.1"
                     /translation="MVKKKEKPKKQKTKAEEDLMARLSKSLTRKPTEFVLNKKISLSE
                     RHVMNNIVRRTMEPCWIVRAGSKDAQNIHVEIKVALRSDGIVSNAEITNKNELEKDPF
                     SLAAGESALRAVLNPSCQPYELPADKYAVWKDLALTFNPREMLGR"
     gene            948..>1324
                     /gene="tolB"
                     /locus_tag="QF359_00405"
     CDS             948..>1324
                     /gene="tolB"
                     /locus_tag="QF359_00405"
                     /inference="COORDINATES: protein motif:HMM:NF015980.3"
                     /note="forms dimers; may be involved in cell envelope
                     integrity; interacts with outer membrane proteins and with
                     the C-terminal domain of inner membrane protein TolA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HJO85399.1"
                     /translation="MIKINQYVGRIFFAALLLLIIAVPARAELRVDITRGVVKPIPVA
                     VTNLLGASAKEQNIGRNIANVIKADLVRSGLFAAIDSKAFIDVENSLNTVPKFGSWRV
                     LKAQALSQGAVQLEAGNKLKVQFR"
BASE COUNT          427 a          321 c          317 g          259 t
ORIGIN      
        1 gccaacaaaa cttgagataa aaacagaaaa gaaaccaccg aagccgccac cggccccaaa
       61 agtaaaaaga gcaccgccgg caccaacgcc accaccaccg gccaaagagc cggaggttgc
      121 tgtcgtgccg ccaccaccgg agcctcaggc aaaaccgaag ccaaaaccaa agccgaaacc
      181 taaagtcgag gcaaaaccaa agccgaaacc taagcctaag ccgaaactaa agccgaaacc
      241 taagcctaag ccgaaactaa agccgaaacc taagcttaag gcgaaaccaa agccgaaacc
      301 taagccgaaa cctaagctta aggcgaagcc caagccaaaa gcgccatcga gtctggcgaa
      361 gttaaaaccg cgccgcaagc ctaaaccacc ggaccgcttt gccatggttt tgaaaaacct
      421 ggaaaaaact ttggaaaaac cagtggtaaa gaaaaaagaa aaaccaaaaa agcagaagac
      481 caaagccgaa gaggatctca tggcgcggct gtctaagtct ttaacgcgca aaccgacaga
      541 gtttgttctt aataaaaaga tatcgctgag cgagcggcat gtgatgaaca atattgtccg
      601 caggaccatg gagccgtgct ggattgtccg cgccggctcc aaagatgcgc aaaacatcca
      661 tgttgagatt aaggtggcgc tgcgctcgga tggcatagtc tccaatgccg agattaccaa
      721 caaaaatgag ctggaaaaag atccctttag tctggccgct ggagaaagtg ccttgcgggc
      781 ggttttaaat ccaagctgcc agccctatga attaccagct gataaatatg ccgtctggaa
      841 agatttagca cttacattta atccgcgaga aatgttaggt agataaatag aatgatttcg
      901 tataagtcga agacccaaga tatattagga aaaatccggg tgggattatg attaaaataa
      961 atcaatatgt cgggcgtatt ttttttgcgg ccttgttact tctgatcatc gcagtaccag
     1021 cgcgtgctga actccgcgtt gatattaccc gtggtgtggt caagccaatc ccagtggcag
     1081 tgacaaattt attgggcgcc tccgccaaag agcaaaatat cggccgcaat attgccaatg
     1141 tgattaaggc cgatctggtg cgttcagggt tgtttgcggc gatcgattcc aaagccttta
     1201 ttgatgttga gaactcccta aataccgttc ctaaatttgg cagctggcgg gtcttgaaag
     1261 cacaggcgct gtcgcaaggt gcggtgcaac tcgaagccgg taataaattg aaagtgcaat
     1321 ttcg
//
LOCUS       DASCNL010000034         1270 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000091963, whole genome shotgun sequence.
ACCESSION   DASCNL010000034 DASCNL010000000
VERSION     DASCNL010000034.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1270)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1270)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000091963"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="QF359_00410"
     CDS             complement(<1..274)
                     /locus_tag="QF359_00410"
                     /inference="COORDINATES: protein motif:HMM:NF017935.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HJO85400.1"
                     /translation="MSMLMPNLIAVMLRGLCRRCPRCGVGQVFNGYLTIEDVCPHCQE
                     SFEGIRTDDVAPWATILLLGHIMAPIVMIVVKLDISTLPLTIIMVGL"
     gene            432..977
                     /locus_tag="QF359_00415"
     CDS             432..977
                     /locus_tag="QF359_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HJO85401.1"
                     /translation="MDDVPKSFWVLLPPIAAMSLVIFISNELVNHPINDWLTWGAFSY
                     PLSFLVTDLTNRLFRAEAARKVVYLGFALGVVLSVFIDIRIAVASGSAFLIAQLLDIS
                     VFDKLRNLEWWKAPLVSSVLGSAIDTALFFTIAFAFTDLPWVTWALGDFGAKLFMAAS
                     LLPIFRILMNFYPSSLKGANT"
     gene            1012..1176
                     /locus_tag="QF359_00420"
     CDS             1012..1176
                     /locus_tag="QF359_00420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85402.1"
                     /translation="MKKYKFLIFAIGTITLTLKVLASRFMTPYFGVSLYIWSGILLNS
                     PDMPSEISSK"
BASE COUNT          313 a          283 c          281 g          393 t
ORIGIN      
        1 ccaaacccac catgataatc gtcagaggta aggtcgagat atcgagttta accacgatca
       61 taacaatcgg cgccataatg tgaccgagta ataaaattgt cgcccagggc gcgacgtcgt
      121 cagtgcggat gccctcaaaa gattcctgac agtgagggca aacatcctca atcgtcaaat
      181 agccattgaa gacctggccg acaccgcatc gcggacagcg ccgacacaac ccacgcaaca
      241 ttaccgcaat caaatttggc attagcatag acatttcggt ttttatgttc cctgattatt
      301 aatgcagtgc ttaaaccatc agctcacaat tgaacaggcg tgttttataa aataattttc
      361 taaacttgct atctagtgtg aaagtcttta tgccccttcg cccaagagaa ctattgaacg
      421 gatattaaaa aatggatgat gtaccaaagt ccttctgggt cttattgcca ccaatcgcgg
      481 ccatgagttt ggtgatcttt atctccaatg aattggttaa tcatccaatc aatgattggc
      541 tgacctgggg tgcgtttagc tatccgttga gtttcttggt cactgatctg accaatcggt
      601 tgttcagagc cgaggccgcc cgcaaagtgg tttatctggg ctttgccttg ggcgttgtgt
      661 tgtcggtctt tattgatatc cgcattgccg tggcatcagg ttccgctttt cttattgccc
      721 aattgctcga tatttcagtg tttgataaat tgcgaaactt agagtggtgg aaagcaccgc
      781 tggtatcttc cgtgttgggc tcggctatcg atacggctct ctttttcacc attgctttcg
      841 cttttactga tttgccgtgg gtaacttggg ccttggggga ttttggtgca aaattgttta
      901 tggcggcatc gcttttgccg atcttccgga ttttgatgaa tttttatccg tcttccctaa
      961 aaggtgctaa tacttaatac tgagccaagt taaatctgcc ggggcaaaaa catgaaaaaa
     1021 tataaatttc taatttttgc cattggcacg attacgctga ccctgaaagt cctcgcatcc
     1081 cgcttcatga caccttattt cggggtcagt ctttatatct ggtcgggcat attgctgaat
     1141 tcaccggaca tgccttcaga aatttcatca aaataacgca cggtaggtac cgtcgattgg
     1201 tcgttcatta tcatttttcc tattgagtta agttatggga attcggattg ttcaattgtc
     1261 cttggagagt
//
LOCUS       DASCNL010000035         3071 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000095932, whole genome shotgun sequence.
ACCESSION   DASCNL010000035 DASCNL010000000
VERSION     DASCNL010000035.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000095932"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..498)
                     /locus_tag="QF359_00425"
     CDS             complement(<1..498)
                     /locus_tag="QF359_00425"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJO85403.1"
                     /translation="MSQPEQLLKLSAVISVHNEEDKLAACLEKLSFADEIVVVMDRCT
                     DGTRVIAEQFTDRLVEGAWDIEGDRRNAAIEACAGEWIFEIDADEHVTEELAGEILDI
                     ADKSQFDWHEIPVDNYIGDRLVRYGWGASYGKAAYPGLFRNGVKIWGLQRVHPSLTWS
                     GKKGAM"
     gene            complement(495..1478)
                     /locus_tag="QF359_00430"
     CDS             complement(495..1478)
                     /locus_tag="QF359_00430"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HJO85404.1"
                     /translation="MKLLFLTSTRIGDAILSTGLLEHLRQEHPQLDVTVACGPAAAPL
                     FAALPGLKRIIILDKMVFSLHWLRLWLLTIGTFWDLVIDLRNTPATFLLGRRQRRGMP
                     RSGGDILRIERIAKVLDLPGIVPPKLWTSPREDELAKQFLPDGGPILAIGPTANWQAK
                     TWRAENFTELVERLTAPTGILPDARVVLLGRDDERPMVLRLIESIPEDRRIDLVGKLN
                     LLTAYACLARTTFYIGNDSGLMHLAAASGVPTLGLFGPTLESLYAPWGENTGIVRTSV
                     PFNEIFPPNFDHRTSDSLMDSLTVDMAEAEARALWQRCQESRPVDRSESVN"
     gene            complement(1500..2531)
                     /locus_tag="QF359_00435"
     CDS             complement(1500..2531)
                     /locus_tag="QF359_00435"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJO85405.1"
                     /translation="MNIIMIDDSYAFDGATPGTRALGGAEKAFANLASALAARGHDVT
                     AINRCDYQASVDDVLWVPFETPRPPECDVLIAFRKPELLDEIDDPAVKSILWMWGQPK
                     ILNQPVNQKLLEKHDPVLVFVGESHRQAWKSWRDFKEAVIVPGIADSYIDAETSKVPP
                     PVAVVTTHPLHGLQNMLRLWQENIYPKNDKAELHIYSASLFNGAVNDRFKDITDEVAG
                     ARVANVSVKSPDSDSEMAAAYRSARVHFYPVIGSEFYGSTLAESQASGTPAVIYVGGE
                     KTDVIKELISNGQTGYLVPDDDAFVNLALKLLAEDTTIYQSLSRDAKTLQAGRNWQSV
                     AIEFEALWK"
     gene            2574..>3071
                     /locus_tag="QF359_00440"
     CDS             2574..>3071
                     /locus_tag="QF359_00440"
                     /inference="COORDINATES: protein motif:HMM:NF013720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85406.1"
                     /translation="MAIEHAEFISRKLVICASARLGYIDAMTDLHYVRIDNRHMLKIA
                     GDDARDFLQGLVSNDLERVSPTRAIYAALLTPQGKYLHDFFIAELAGAFYLDCEAARI
                     DDLYKRLRMYKLRAKIDIGIVDDLTVAVLFGEYAPAALGVGPDNGSAAEKYGGIVYID
                     PHLRDI"
BASE COUNT          780 a          842 c          691 g          758 t
ORIGIN      
        1 catcgcaccc tttttgccac tccaagtaag gctcggatga acccgctgca ggccccaaat
       61 tttgacacca tttcgaaaca gtccggggta agctgccttg ccataggacg caccccagcc
      121 ataacgaacc agccggtcgc caatataatt atcaaccgga atttcatgcc aatcaaattg
      181 ggatttgtcg gcaatatcca gaatttcacc agcaagttcc tcggtaacat gttcatcggc
      241 atcaatttca aatatccatt cgccggcgca ggcttcaatt gcagcgttcc gccgatcgcc
      301 ttcaatatcc caggcaccct cgacgaggcg atcagtaaac tgttcagcta ttacgcgagt
      361 gccatcggta cagcgatcca tcacgacaac gatctcatcg gcgaaagaca atttctccaa
      421 acacgcagcc agcttatctt cttcattgtg gacactgatc acggctgata atttgagcag
      481 ctgttctggc tggctcaatt gaccgactcc gaccgatcaa ccggtcggct ttcctggcac
      541 ctctgccaca atgcccgggc ttccgcttcc gccatgtcga cggttaaact gtccattaag
      601 ctatccgatg ttcggtgatc aaaattcggt gggaatattt cattaaacgg caccgacgtc
      661 cttacaatac ctgtgttttc accccacggt gcataaagcg attcaagagt tggcccaaac
      721 aatccgagtg tgggtacgcc agaggccgct gccagatgca tcaaacccga atcattgcca
      781 atatagaatg tggttcttgc gagacaggca taggcggtca aaaggtttag cttaccaact
      841 aaatcaatcc gccgatcctc gggaatagat tcaatcaagc gtaagaccat tggccgttca
      901 tcgtcacggc ccagcaaaac cacccgcgca tctggcaaaa ttcctgttgg cgcagtcaag
      961 cgttctacaa gctcagtaaa attttctgcc cgccaagttt tggcctgcca gttagccgtc
     1021 ggtccaatcg ctaaaatcgg cccaccatcc ggcaagaact gtttggccaa ttcatcttcc
     1081 cgtggactgg tccacaattt tggcggcacg atcccgggta aatccaacac tttggcaata
     1141 cgttcaatcc ggagaatatc gccaccgctt ctcggcatgc cgcgccgttg gcgccgcccc
     1201 agcagaaagg tggcaggcgt atttctgaga tcgattacca aatcccaaaa ggtgccgatg
     1261 gtgagcaacc acagtcttaa ccaatgcagt gaaaatacca ttttatccaa tataatgatg
     1321 cgctttaaac cgggtaaagc tgcaaacaaa ggtgctgctg ccggaccaca ggcaaccgta
     1381 acatccagtt gcggatgctc ttgccgcaga tgttcaagca atccggtcga tagtatagca
     1441 tcgccaatcc gcgtcgatgt taagaataat aacttcatat caatagttta agtttttttt
     1501 tatttccata aagcttcaaa ttcaattgct acactttgcc aattacgtcc agcctgcaat
     1561 gttttagcat cgcggctgag actttgataa atggtggtat cctccgccaa caacttgagc
     1621 gccaaattta caaaagcatc atcgtcgggt accaggtagc cagtctggcc gttactaatg
     1681 agctctttaa taacgtcagt tttttcacca cctacatata ttactgccgg tgtgccactg
     1741 gcctgcgact cggccaaggt cgagccataa aattccgagc caatcaccgg ataaaaatgc
     1801 acccgcgctg agcggtacgc cgccgccatt tcactatctg agtcgggtga tttgacgctg
     1861 acgttagcga cccgggcgcc ggcgacttcg tcagtaatat ctttaaaccg gtcattgacc
     1921 gcaccgttga aaaggctggc cgagtaaata tgcaactccg ccttgtcatt tttggggtag
     1981 atattctcct gccacagacg caacatgttc tgcaagccat gcaaaggatg cgtcgtgaca
     2041 accgccacag gtggtggcac tttgctggtc tcggcatcaa tatagctgtc agcaatgccg
     2101 ggcacgatga cggcttcttt aaaatcccgc catgacttcc aggcttggcg gtgactctca
     2161 ccaacaaaca ctagcaccgg atcgtgtttt tccagcaact tctgatttac tggttggttg
     2221 agaattttcg gttgccccca catccacaaa attgatttaa cagccggatc atctatctca
     2281 tccaacagtt caggttttct gaaagcaatc aacacatcac actcaggtgg ccgcggcgtc
     2341 tcaaacggca cccacaacac atcgtccaca ctcgcctgat agtcacagcg gttaattgcc
     2401 gtcacatcat gaccacgagc tgccagagcg cttgccaaat tcgcaaaagc cttctctgct
     2461 ccccctaaag cgcgagtacc tggcgtcgct ccatcgaagg cataggaatc gtcaatcatt
     2521 ataatattca tgcatctttc cttgcgcgct gtttatagga gtttcaaaga cttatggcaa
     2581 ttgagcacgc agaatttatt agcaggaaac ttgtcatttg cgcatcagcc cggctcggct
     2641 atattgatgc catgactgat ttacattatg tgcgtataga taaccggcac atgttgaaaa
     2701 tagccggcga tgacgcgcgc gactttctgc aggggctggt ctcaaatgat cttgaacggg
     2761 tgtcgccgac gcgggcgatt tacgctgcgc tgttgacccc acaaggaaaa tatctgcacg
     2821 atttcttcat tgccgagcta gctggcgcct tttatctcga ttgtgaagct gcccggattg
     2881 atgatctata caagcgctta cgcatgtata agctccgcgc taaaatcgac ataggaatcg
     2941 tcgatgatct aaccgtggcg gtgctatttg gtgagtatgc accagcggca ctgggtgttg
     3001 gacctgataa tgggagtgcg gcagaaaaat acggtggtat cgtctacata gatccacacc
     3061 tccgcgatat t
//
LOCUS       DASCNL010000036         3756 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000097744, whole genome shotgun sequence.
ACCESSION   DASCNL010000036 DASCNL010000000
VERSION     DASCNL010000036.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3756)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3756)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3756
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000097744"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="QF359_00445"
     CDS             <1..894
                     /locus_tag="QF359_00445"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85407.1"
                     /translation="FPDFLVYTKNCKNLAKKINATGKGVVQIEVLPFNSIKMFQQPPA
                     VSKGRVDLVCTPAAFYARAIPENEAISTASSSPMQARAAGGVAIIDGLHQKHFNMKYL
                     GWTTGGGKFRIYMKNAPKFSAAGLPDFSGVKMRDNPIYGAFLRALKASTHNLPSSAVY
                     GALEKGVVDASPWATIGIKGLKWDKFLRHAIEPDFYQTDIGWAMNLAKWNGLSAKAKG
                     ILQSALINQEKINNVQGLDLSAKERVTLIKEGMKFHSVPNSKAYLKMAVDSAYNRVAG
                     RLKKSGRDSSHLSKLRAAYQQ"
     gene            966..1541
                     /locus_tag="QF359_00450"
     CDS             966..1541
                     /locus_tag="QF359_00450"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HJO85408.1"
                     /translation="MTQLFKIVSRYWERLLWLMMATASVYVGLIMIAIIYITTFRFFG
                     ATYNLYTTTFIEYGFVYVMFLGSPWMVRNRGHVFIEMLTAAVSPRIRDYLSRFICLVA
                     AIVCLIWAWYTWQLFAERWDDSMAFDELRAQLDIRLWVTTIAFPFGFLMMGVEFLRFV
                     FVRETMHMGLAGVASDRVELEETQRSLKGEI"
     gene            1541..2947
                     /locus_tag="QF359_00455"
     CDS             1541..2947
                     /locus_tag="QF359_00455"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO85409.1"
                     /translation="MEWYWILIALLGSTLALMFIGFPVGVAFILVNTVAAFIIYGRFG
                     SLDANMEAGIYQLTDNAFANMSIFAIVPIPMFLLMGELFFHTGLANRMFNAVENLMGS
                     TPARLSYVTVAGGTAFATLSGSSMGSTALLGTLMVPEMTKRGYKKSMSIGPILGTGGL
                     AMLIPPSALAVLLGTLAEIDIGRLLIGGIVPGLILATMYAVYIFLRATYDPSVAPIYE
                     VEYIPWSARLCLFLTDVVPMISIIVMVILLIMFGVATPSESAAYGSLGVIILSILYLW
                     LMPLLRGERDQAHKFWLKFSDSLWKSMWGAARVTIIALMILFGSSLFSNVLAASGASV
                     ALIEWVTSFDVSGFVMLLIMFGILLLLGMFMDQLAMMLLTVPIFFPIIVGFDFGLSAE
                     QQVIWFAVIMLLAMEISFTTPPFGLLLFVMQGVAPPGTKFSEICLAAIPFMACAMFLV
                     ALIIFFPPIVTWLPFLGP"
     gene            2951..>3756
                     /locus_tag="QF359_00460"
     CDS             2951..>3756
                     /locus_tag="QF359_00460"
                     /inference="COORDINATES: protein motif:HMM:NF013086.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO85410.1"
                     /translation="MTVKPSQNMIFDISVPVVIVGGGAAGMVAALSLADAGISPLILE
                     RDPVPSGSTGLSSGMVPACGTKIQAAEGVDDSVNILSRDIIEKAHGEVDRAIVEVVCA
                     ASGPAIDWLVEAHAIELTLVGGFLYPGHSRLRMHAPPSRQGVDLIGGLTVAAERAGID
                     VMTEARVVDLFVKERGDIEGVGIERPDGSSETIGCQALILACNGYGGNPELVKRYIPD
                     MATANYFGHAGNQGEAILWGEDLGAATSYLGSYQGHGSVAHPHGILITWAL"
BASE COUNT          818 a          863 c          996 g         1079 t
ORIGIN      
        1 ttcccggatt ttttggttta tacaaaaaac tgcaaaaatt tggcgaaaaa aattaatgca
       61 accggcaaag gcgtggtgca aatcgaagtt ttgccgttca actcgatcaa aatgttccag
      121 cagccaccgg ctgtcagcaa aggccgggtt gatctggtgt gtacaccagc tgcgttttac
      181 gcccgggcaa ttccggagaa tgaagccatc tcgacagcta gctcatcgcc aatgcaggcg
      241 cgggcagcgg gtggtgtggc cattatcgat ggactccatc aaaagcattt caatatgaaa
      301 tatcttggct ggacgacagg cggcggtaag tttcgcatct atatgaaaaa tgcacctaaa
      361 tttagcgcag cgggtctgcc tgatttttcc ggcgtgaaaa tgcgcgacaa tccgatttat
      421 ggcgctttct taagagctct caaagcatca acgcacaacc ttccatcgtc cgctgtctat
      481 ggcgcccttg aaaaaggcgt ggttgacgcg agcccatggg caaccatcgg catcaaaggt
      541 ttgaaatggg ataagttttt acgtcatgca attgagccgg atttctatca gaccgatatc
      601 ggctgggcga tgaatttagc aaaatggaac ggtttaagcg ccaaggcaaa gggtattctg
      661 caatcggctt tgattaatca agaaaaaata aataatgttc agggacttga tttgagcgca
      721 aaagaaaggg ttactttgat aaaagaaggt atgaaatttc atagcgtacc taactcaaaa
      781 gcctacctga aaatggcggt cgattcggcc tacaatcgag ttgccggtcg gctcaagaaa
      841 tccggtcgtg attcgtcaca tttatcaaaa ctgcgcgcgg cttatcagca atagggcggt
      901 taagagagta aataatcggc ggcggcccgg agtaaatttc tgggccgccg ttcttggtta
      961 ttttaatgac gcaattattt aaaatagtga gccggtattg ggaacgtttg ctgtggctga
     1021 tgatggcaac ggcgtccgtt tatgtcggcc tcattatgat cgccatcatc tatatcacca
     1081 ctttccgttt ttttggcgcc acttataatc tctatacgac gacttttatc gaatacggct
     1141 tcgtttatgt catgttcttg ggctcaccct ggatggtgcg aaatcgcgga catgttttta
     1201 ttgaaatgct caccgctgca gtatcgccaa gaattcgtga ttatctttcc cgtttcatat
     1261 gtctagtggc ggccatcgtt tgcctgatct gggcttggta tacgtggcag ctatttgccg
     1321 aacgctggga tgacagcatg gcatttgatg aactgcgcgc tcaacttgat attcgcctgt
     1381 gggtcaccac catcgccttt ccctttggtt ttttaatgat gggggtagaa ttcctgcgtt
     1441 ttgtgtttgt ccgtgagacc atgcatatgg gacttgccgg tgtcgccagt gaccgggtcg
     1501 aattggaaga gactcagcgt tcgcttaaag gcgaaattta atggagtggt attggatact
     1561 aatcgcgctt ttgggttcta cgttagcgtt gatgttcatt ggctttcccg tcggtgttgc
     1621 gtttatcctg gtaaacacgg tagcagcctt cattatatac ggccgctttg gcagcctcga
     1681 tgcaaatatg gaagcaggca tttatcagct caccgataat gcctttgcca acatgtcgat
     1741 tttcgccatc gtgcctattc cgatgttttt gttgatggga gagctgtttt tccacactgg
     1801 gcttgccaat cgcatgttta atgcggtgga aaatttaatg ggtagcaccc cggcgcggct
     1861 gtcctatgtt acggttgccg gcggaacagc ttttgccacc ctctccggct cgtcgatggg
     1921 ctcgaccgcc ttgctgggca cactgatggt gcctgaaatg accaagcgcg gttacaaaaa
     1981 aagcatgtcg atcggtccga tcttagggac cggaggattg gcgatgctga taccaccgtc
     2041 ggccttagcc gtcttactgg gcacgctcgc cgaaatcgac atcggcagat tgctgatcgg
     2101 cggcattgtg ccaggcttaa ttttagcaac catgtatgcg gtctatatct ttctcagggc
     2161 gacttacgat ccttcggtag cacccattta tgaggttgaa tatattccat ggtcggcccg
     2221 tttgtgtcta tttttaacgg atgttgtgcc gatgatttca atcatcgtga tggttattct
     2281 gttaattatg ttcggtgtcg cgacgccttc tgaatctgcc gcctatggtt cgctgggcgt
     2341 gattatccta tcaattttat acttgtggct gatgccgctg ttgagggggg agcgtgatca
     2401 agctcacaaa ttctggctga aattttccga ttcattgtgg aaatcaatgt ggggagccgc
     2461 ccgggtgacc atcatcgctc taatgatcct ttttggttcc agcctgtttt cgaatgtgct
     2521 cgctgcatcc ggcgccagcg tcgcccttat tgaatgggtc acaagttttg acgtttccgg
     2581 tttcgtcatg ctactgatta tgtttggtat tcttttattg ctcggcatgt ttatggatca
     2641 actggcgatg atgctgctga ctgtgccgat atttttcccc ataattgttg gcttcgattt
     2701 tggcttgtca gccgaacaac aggttatttg gtttgcagta atcatgctcc tggcgatgga
     2761 gatcagtttc acgacgccgc cgtttggctt gttgctattc gtcatgcaag gtgtcgcgcc
     2821 accgggaact aagttcagtg agatttgtct ggccgccatt ccgtttatgg cctgcgccat
     2881 gttcctggtc gctttgatca tcttttttcc acctatcgtg acgtggttac cattcctcgg
     2941 tccatagacg atgacggtta aaccatctca aaatatgatt tttgatatct ctgttccggt
     3001 ggtgattgtc ggcggcggtg ccgctggcat ggttgcagcc ctgagtctcg ccgatgctgg
     3061 aattagcccc ttgatcttgg aacgtgatcc ggtgccgagc ggcagtacag gcctgtcttc
     3121 gggaatggtt ccggcttgcg gcacaaaaat tcaagcggct gagggcgttg acgacagcgt
     3181 caatatttta tcacgggata ttatcgaaaa agctcatggt gaagttgata gggcaatcgt
     3241 cgaagtggtg tgcgccgcct ccggtccggc aattgactgg ctggtcgaag ctcatgccat
     3301 agaactcaca ttggtaggcg gctttttata tcctggccac agccgattgc gcatgcatgc
     3361 accgccatcc cgtcaagggg ttgatctcat cggcgggctt accgttgctg ctgaacgcgc
     3421 cggtattgat gttatgaccg aggccagggt tgttgatctg tttgtcaaag aacgaggaga
     3481 tattgagggc gtcggaattg aacgtcccga tggttccagt gagacaatcg gttgtcaggc
     3541 gctgatcttg gcctgcaatg gctatggcgg caatccagaa ttggttaagc gctatatccc
     3601 agatatggcg acggcgaact attttggtca tgccggcaac caaggagagg ctattttatg
     3661 gggtgaagat ctcggcgcgg cgacaagcta tctcggatcg tatcaaggtc atggctctgt
     3721 cgctcatccc cacggtattc tgatcacctg ggcact
//
LOCUS       DASCNL010000037         1185 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000098706, whole genome shotgun sequence.
ACCESSION   DASCNL010000037 DASCNL010000000
VERSION     DASCNL010000037.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000098706"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1185
                     /locus_tag="QF359_00465"
     CDS             <1..>1185
                     /locus_tag="QF359_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HJO85411.1"
                     /translation="PDEEGDRFIEIWNLVFMQFEQITPDERVELPKPSIDTGMGLERF
                     SAVLQGTHDNYETDLFQALINASAEMSGTPVEGDHNVSHRVIADHLRATSFLITDGVL
                     PSNEGRGYVLRRIMRRAMRHAHLMSCEDPLLFKLVPTLVQQMGQAFPELTRAQALITE
                     TLELEENRFKRTLDRGLGLLEEETGKLPEGGELPGEVAFKLYDTYGFPLDLTQDALRG
                     QGFSVDLGGFNTAMEKQRADARAAWSGSGDAATEQVWFDIREQNGATEFLGYEVESAE
                     GQITVMVVDGKVVEDAEDGAEVALVLNQTPFYGESGGQEGDTGTITKEGGATVTITET
                     QKKLGDLHVHLGTLSGGSLKVGDDVQLEVDHDRRSALRAHHSATHLLHAALRNELGDH
                     ITQ"
BASE COUNT          278 a          292 c          341 g          274 t
ORIGIN      
        1 ccggatgaag agggtgaccg gtttatcgaa atttggaatc tggtctttat gcagtttgag
       61 cagattacgc ccgatgagcg tgtcgaactg ccgaagccca gcatcgatac tggcatgggg
      121 ctggaacgct tttcagccgt gctgcaaggc acccatgaca actatgaaac tgatttgttt
      181 caggccttga tcaatgcctc ggctgaaatg tcgggcacac cggtagaggg agaccacaat
      241 gtgtcccatc gggtcattgc cgatcatttg cgcgctacta gttttctgat caccgatggc
      301 gtgttgccgt caaatgaagg ccgtggttat gtgcttcggc gcattatgcg acgtgccatg
      361 cgccacgccc atctaatgag ttgtgaagat ccactgttgt ttaaattagt accaaccctc
      421 gtgcagcaaa tgggccaggc ttttccggaa ctaacccgcg ctcaggcttt gatcactgaa
      481 accttggagc tcgaagaaaa tcgctttaaa cgcacactcg atcgcggtct cggattgtta
      541 gaagaggaaa ccgggaaatt gccggaaggc ggcgaattgc cgggcgaagt cgcctttaaa
      601 ctctatgaca cctatggctt tccactagat ttgacccagg atgcactacg cgggcagggg
      661 ttcagcgtcg atcttggcgg ttttaacaca gcgatggaaa agcagcgcgc cgatgcaaga
      721 gccgcctggt ctggctccgg tgatgcggca acagaacaag tctggtttga tattcgcgag
      781 caaaatggcg cgacggaatt cctcggctat gaagttgaaa gcgccgaagg ccagatcact
      841 gtcatggttg ttgatggcaa ggttgtcgaa gacgccgagg atggggcgga ggttgctctg
      901 gtgcttaacc agacaccgtt ttatggcgag tctggtggcc aggaaggcga taccggcaca
      961 atcactaaag aaggcggcgc tactgtcact atcactgaaa cccaaaagaa acttggcgat
     1021 cttcacgttc atctcggcac actttccggc ggcagcctta aagttggtga tgacgtgcaa
     1081 ttggaagttg accatgaccg ccgttcggcg ttgagggcgc accattcggc aacccatttg
     1141 ctgcatgctg cgttgcggaa cgagttgggt gatcatatca cccag
//
LOCUS       DASCNL010000038         1058 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000100245, whole genome shotgun sequence.
ACCESSION   DASCNL010000038 DASCNL010000000
VERSION     DASCNL010000038.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1058)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1058)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000100245"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="QF359_00470"
     CDS             complement(<1..225)
                     /locus_tag="QF359_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HJO85412.1"
                     /translation="MFDRIRQWRKYLTLLGALAAVFTPHKLAAELEPVDVELVLAIDV
                     SGSVDWKEAELQRDGYIQVSESLQFIKVIKP"
     gene            complement(289..>1058)
                     /locus_tag="QF359_00475"
     CDS             complement(289..>1058)
                     /locus_tag="QF359_00475"
                     /inference="COORDINATES: protein motif:HMM:NF016236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HJO85413.1"
                     /translation="LAPKTKDWDDDLDMDDLGPGVEAAIEDINDPLEPFNRVMFGFNE
                     FLVKYLINPMARGYNAAVPDAAREAIRNFLSNLNGPVVLANDLLQGELKRGYATTMRM
                     VINSTAGILGFIDIAKNLGFEEHNEDFGQTLAVWGVGEGFYLVLPIFGPSNPRDVLGK
                     ILVDPYLDPLGYYFNNTDREEIGSGNITARGFTNYAAFVEQIDELRKSSLDFYGALRS
                     LYRQRRNSEIKNGGFDDLPNIDSILDKRSVPPSLPKP"
BASE COUNT          296 a          264 c          232 g          266 t
ORIGIN      
        1 gggcttaata actttaatga attgcagact ttcactaact tggatataac catcccgttg
       61 gagctcggcc tccttccaat caacactgcc cgaaacatca atggcgagca caagttcaac
      121 gtctaccggt tccaattctg cagctagctt atgaggcgta aatacggcag ccaaagcgcc
      181 aagcaaagtc aaatattttc gccactgtct gatccgatca aacatgggcg aattacaccc
      241 cgatttgggc gcgaggacaa gagccagcgg cgaaagattt tataacactt atggtttggg
      301 caagcttggc gggacacttc gtttatcgag aattgaatca atattgggta aatcgtcaaa
      361 accgccattc ttgatttctg aattgcggcg ttgacgataa agactgcgca aagcgccata
      421 gaaatcgaga gaactttttc gcaactcatc aatctgttcg acaaaagcag cataattagt
      481 aaatccgcgc gcggtgatat taccgctacc gatttcttca cgatctgtat tgttgaaata
      541 gtatccgagc ggatccagat acgggtcgac tagtattttt cctaatacat ctcgcggatt
      601 agagggaccg aatatcggca acaccagata gaagccttca cctacccccc acacagccag
      661 cgtttgacca aaatcttcat tgtgctcctc gaagcctaaa ttcttggcaa tgtcgataaa
      721 tccaagtatg ccggccgtgg aattgatcac catgcgcatg gtggtggcat aaccgcgctt
      781 gagttcaccc tggagcagat cattggctaa gaccacaggg ccgtttaaat tgctgagaaa
      841 attccgaata gcctcacgcg ccgcgtccgg cacggcagcg ttatagcccc gcgccattgg
      901 gttgattaga tatttaacaa gaaattcatt gaaaccgaac attacgcggt taaatggttc
      961 gagcggatca tttatatctt caatcgcagc ttccacacct ggaccaagat cgtccatatc
     1021 gagatcatca tcccaatctt tcgttttcgg tgctagag
//
LOCUS       DASCNL010000039         1639 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000102028, whole genome shotgun sequence.
ACCESSION   DASCNL010000039 DASCNL010000000
VERSION     DASCNL010000039.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000102028"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="QF359_00480"
     CDS             <1..554
                     /locus_tag="QF359_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJO85414.1"
                     /translation="FVAAFAIAGNLAAAGKPKVYFKTNVGDFTIELEPEKAPQTVANF
                     LQYVRDGHYDGMIFHRVINAFMIQGGGFDTSYSKKPTREPIPNEADNGLSNERGTIAM
                     ARTGDPHSATNQFFINVKFNGFLNYRSKTQQGWGYTAFGRVIDGMNIVGRISRMETGP
                     GGPFPTDVPQKQVVIEKVKIISE"
     gene            566..1438
                     /locus_tag="QF359_00485"
     CDS             566..1438
                     /locus_tag="QF359_00485"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HJO85415.1"
                     /translation="MADKPVIGIIGGSGLYEIDGLANTRWERVDSPFGPTSDEFLFGD
                     LDGQQLIFLPRHGRGHKIPPSELNFRANIDALKRAGVTEIISLSACGSFKEELDPGTF
                     VIADQFIDRTFARVKSFFSSGMVAHVGFGHPVCSRLGDALEAGAKALGIKTQRGGTYL
                     AMEGPQFSSLAESNLYKSWGCDVIGMTNMPEAKLAREAEMCYATVAMVTDFDCWHPDH
                     DHVTVDAIIKVLLGNADNARSLVKEVAPKLSGRTELCSDGCHTALENALITAPEARDP
                     DVCAKLDAVAGRVL"
     gene            1442..>1639
                     /locus_tag="QF359_00490"
     CDS             1442..>1639
                     /locus_tag="QF359_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HJO85416.1"
                     /translation="MKVNGTPYRTIWLAEDGWAVEIIDQTKLPHEFITVRLESMQDAA
                     LAIKDMWVRGAPLIGATAAYGV"
BASE COUNT          377 a          411 c          458 g          393 t
ORIGIN      
        1 cgttcgtggc ggcttttgcc attgccggta atctagcggc cgccggtaaa ccgaaggttt
       61 atttcaaaac taatgttggt gatttcacca ttgaactgga accggaaaaa gcaccacaaa
      121 cagtggccaa ctttctgcaa tatgtccggg atggccatta tgatggcatg attttccacc
      181 gcgtgattaa tgcgtttatg atccaaggcg gcggctttga tacgagctac agtaaaaagc
      241 caacccggga acctatccct aatgaggcgg ataatggcct ttcaaacgaa cgtggcacca
      301 tcgcgatggc ccggaccggt gatcctcatt cggcgaccaa tcagtttttt atcaatgtaa
      361 agtttaacgg ctttctcaat tatcgttcaa agactcaaca gggctggggc tataccgctt
      421 ttggccgggt gattgatggc atgaacattg tcggccggat atccaggatg gaaaccggcc
      481 cgggcggacc gtttccaacc gatgtgccgc aaaagcaagt agttatcgaa aaagttaaaa
      541 ttatttctga gtagggggac ccttcatggc agacaaaccg gtaattggca tcatcggcgg
      601 cagtggactt tatgagattg acgggctcgc caatacgcgc tgggagcggg ttgatagccc
      661 gtttggaccg acctcggatg aatttctgtt cggcgatttg gatggacaac agttgatctt
      721 tctgccgcgt cacgggcgcg gtcataaaat cccgccatct gaattaaatt tccgcgccaa
      781 tattgacgcg ctcaaacgcg ccggcgtgac tgagatcatt tctttgtcag cttgcggctc
      841 atttaaagaa gagcttgatc ccggcacttt tgtcattgcc gaccaattta tcgaccggac
      901 ctttgcgcgg gtaaaaagtt ttttcagctc tggtatggtg gcccatgttg gttttggcca
      961 tcccgtgtgt tcgaggcttg gtgatgcgct ggaagcaggc gccaaggcac tcggcattaa
     1021 aacccagcgc ggtggaactt atttggcgat ggaagggccg cagttttcaa gccttgctga
     1081 atccaatctc tataaatctt ggggttgcga tgtcatcggc atgaccaata tgccggaagc
     1141 caaactcgcc cgggaagccg agatgtgcta cgcgaccgtg gccatggtga ctgatttcga
     1201 ttgctggcac cccgaccacg accacgtgac ggtcgacgcc attattaagg tgctgctggg
     1261 aaacgccgac aatgcgcgct cgctagttaa agaagttgcg cctaaattat ctggccgtac
     1321 cgagttgtgc tcggacggtt gtcacaccgc ccttgaaaac gctttgatca cggcgccgga
     1381 agcccgcgac ccggatgtct gcgccaagct cgacgcggtc gccggcaggg tgctctaagt
     1441 tatgaaagtg aacggcacac cttaccgcac gatctggctg gcagaggacg gctgggcggt
     1501 ggagatcatt gatcaaacca aactgcctca tgagttcatt accgtcaggc ttgaatccat
     1561 gcaggatgcg gcgttagcga tcaaagacat gtgggtccgg ggcgcaccat tgattggcgc
     1621 gacggctgct tacggtgtt
//
LOCUS       DASCNL010000040         1039 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000103836, whole genome shotgun sequence.
ACCESSION   DASCNL010000040 DASCNL010000000
VERSION     DASCNL010000040.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000103836"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="QF359_00495"
     CDS             complement(<1..184)
                     /locus_tag="QF359_00495"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO85417.1"
                     /translation="MSIIENYLAPSSIDDAAAALAAGPATIVAGGTDLMLQTGSGQKA
                     YAPTLLNIQKITKMRGV"
     gene            complement(209..>1039)
                     /locus_tag="QF359_00500"
     CDS             complement(209..>1039)
                     /locus_tag="QF359_00500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HJO85418.1"
                     /translation="YNLNIFGNLFEQVAKFRAGRGLWAKIIKEEYDAKDPRSMWLRMI
                     AGGGGGGLTFEQPEVNIVRGAYYALISALSGTQTMALCSYDEAYTIPTEYSARISLRT
                     MQLLMEETGLCDTVDPMAGSYYMETLTNQMRDKMEEIMTDVDVQGGVVEMIKKGELQA
                     KVSGQAYQMQKDIDSGAFPKVGVNCYRVEEEEEHEVEFHPYNTKDAELQIESLKEIRA
                     SRDQVAVDKCLAQLKADAEAGKNVMPAIVEAVKAYVTVGEITDTMVEIYGRYEEPIVF
                     "
BASE COUNT          225 a          280 c          240 g          294 t
ORIGIN      
        1 agacgccgcg cattttagtg attttctgga tgtttagcag ggttggtgcg taggcttttt
       61 ggcccgaacc ggtttgtagc attagatcgg tgccgccggc gacaatcgtc gccggacccg
      121 ccgctaaggc cgccgccgca tcgtcgatgc tgctgggcgc gagataattt tcgataatac
      181 tcatctatac ttcctttaat ccctcgcttt aaaaaacgat gggttcctca taacggccat
      241 aaatttcgac catggtgtcg gttatttcac caaccgtcac ataggctttc accgcttcga
      301 caatcgccgg catgacattt tttcctgcct cagcatcggc ttttaattgc gccaagcatt
      361 tatcaacggc tacctgatca cgtgatgctc taatttcttt taggctttcg atttgcagtt
      421 cagcatcttt agtgttgtat ggatggaact cgacttcgtg ttcctcttcc tcctcaacgc
      481 ggtagcaatt gacgccgact ttcgggaagg ccccggaatc tatgtctttt tgcatttgat
      541 aagcctgacc tgatactttg gcctgcaact cacccttctt gatcatttcg acgacgccgc
      601 cctggacatc tacatcggtc atgatttctt ccattttgtc ccgcatttga ttggtcaggg
      661 tttccatata ataagagcct gccatcggat cgaccgtgtc gcacaatccg gtttcctcca
      721 ttagcaactg catagtgcgg agcgagatgc gtgccgaata ttcggttggg atggtgtagg
      781 cttcgtcata agagcaaagc gccatggtct gggtaccgga aagcgcactg atcaaggcgt
      841 aataagcgcc gcggacaata tttacttccg gctgctcaaa tgtcaggccg ccgccaccac
      901 caccggcgat catgcgcagc cacattgagc gcggatcttt ggcgtcatat tcttccttga
      961 taattttcgc ccaaagccca cgaccggccc ggaatttagc cacttgctca aataaattac
     1021 caaaaatatt gagattgta
//
LOCUS       DASCNL010000041         1544 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000107526, whole genome shotgun sequence.
ACCESSION   DASCNL010000041 DASCNL010000000
VERSION     DASCNL010000041.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000107526"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="QF359_00505"
     CDS             complement(<1..317)
                     /locus_tag="QF359_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HJO85419.1"
                     /translation="MNDKTQNMKFFIAKVADGNSLNEADAEVAFNIIISGDATPSQIG
                     GFLMALRVRGETVDEITGAARAMRAKAVYIEAPEDAIDVVGTGGDGSGTYNISTGAAI
                     VVAA"
     gene            complement(372..917)
                     /locus_tag="QF359_00510"
     CDS             complement(372..917)
                     /locus_tag="QF359_00510"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006115291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HJO85420.1"
                     /translation="MFLLIDNYVSFTFNLWHYLSEIGVEVEVRRNDAIRADNALALNP
                     KAIIISPGPCDPYKAGICLELVEKETGKVPIFSVCLGFQVIGQVFGAKVVLSPLPMHG
                     KLSKISHSSVGIFAELPEDFDATRYHSLMLDLKNRPEDPEITAKSEDEIIMSIAHKDH
                     VISGVQFHPESIASEHGHKLL"
     gene            1096..>1544
                     /locus_tag="QF359_00515"
     CDS             1096..>1544
                     /locus_tag="QF359_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HJO85421.1"
                     /translation="MSKNAVKVPDKDPVCFMSVDPNKMEHHHEFESESYHFCCDGCRS
                     KFSKDPDNYLNQIDPVCGMKVDIRKKGDSEFSHDGNRYYFCSDDCRTKFSGDPEKYLN
                     PTEQDAGDPETIYTCPMDPEIEQIGPGVCPICGMALEPMDAIVAILET"
BASE COUNT          459 a          362 c          325 g          398 t
ORIGIN      
        1 gcggcgacaa caatcgcggc accagtcgaa atattatagg tacctgagcc atcaccaccg
       61 gtaccaacaa catcaatcgc atcttcgggg gcttcgatat aaaccgcttt tgcccgcatc
      121 gcccgtgccg cgccagtgat ctcgtcaacg gtttcacccc gaactcgaag ggccatcaaa
      181 aagcctccaa tttgagacgg cgtcgcatcg cccgaaataa tgatgttaaa cgcgacttcg
      241 gcatcggctt cgttcaatga attgccatca gccaccttgg cgatgaagaa tttcatattt
      301 tgtgttttat cattcatttt aacacgcttt ccccaagcaa attcttatta gttaaccagt
      361 gcaacaaagt tttacagcag tttgtgccca tgttcagaag caatgctttc cggatgaaac
      421 tggacgccgg atataacatg atctttgtgg gcaatagaca ttataatttc atcttcactt
      481 tttgcagtaa tttcagggtc ttcaggcctg ttttttagat ccaacatgag tgaatgatag
      541 cgcgtggcat cgaaatcttc cggcagttcg gcaaaaatcc caacgctgct gtggctgatt
      601 ttgctcagtt taccatgcat cggcagtgga gatagcacaa ctttggcgcc aaatacttga
      661 ccaataacct gaaacccaag gcaaacgcta aaaataggca ctttaccggt ctctttttca
      721 actagttcca gacaaatacc ggctttataa ggatcacatg gaccaggaga aataatgatc
      781 gctttgggat tgagcgccaa cgcgttatcg gctctgatgg catcattgcg gcgcacctct
      841 acctcgacac caatctcact gagatagtgc cataaattga aggtaaagct aacgtaatta
      901 tcgatcagca aaaacatatc ataataacgc taaatacctg aatccctgtg taaattttgg
      961 cgcacaatgc aatcagagac ctataacgtc aagcatcacg atgaacaact tttatatttg
     1021 accttccaga aactggaagg tttatagtag acattacatc taactataag gttcgaaaac
     1081 tagaatatga atgaaatgtc taaaaatgca gtcaaagtcc cggataaaga tccggtctgc
     1141 tttatgtccg ttgatcctaa taagatggaa catcaccacg aatttgaatc ggagagctat
     1201 catttctgct gtgatggttg tcgctctaaa ttcagcaaag accccgataa ttatctaaat
     1261 caaattgacc cggtttgcgg catgaaggtt gatatccgca aaaaagggga cagtgaattt
     1321 agccatgacg gcaatcgata ttatttctgc tcggatgact gccggactaa attcagcggc
     1381 gatccggaaa aatatctcaa cccaacggaa caagacgcgg gcgatccgga aacgatttat
     1441 acctgcccga tggatcccga gattgaacaa attggtcccg gagtctgtcc aatctgtggc
     1501 atggcattag agccgatgga cgcgattgta gcgatactag aaac
//
LOCUS       DASCNL010000042         1627 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000131671, whole genome shotgun sequence.
ACCESSION   DASCNL010000042 DASCNL010000000
VERSION     DASCNL010000042.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000131671"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="QF359_00520"
     CDS             <1..725
                     /locus_tag="QF359_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HJO85422.1"
                     /translation="LSHPAEYQQIIDACERINLDTSVGAVILTGAGTSFCAGGNVKDM
                     KEQSGMFSGDPLEISDKYRHGIQKIPLALYNLEAPTIAAVNGPAIGAGCDLTLMCDIR
                     LASETAKFAESFVQLGIVPGDGGAWLLQRTVGLSKAYEMAFTGDTITAQEALECGLVS
                     KCVAPEELMKETRVMTARIVKNPPRTLRLSKKLMREGMHVRLDTLLEMSAAFQAMAHK
                     TDEHLEQLNKISLSRDDSRGKK"
     gene            complement(746..>1627)
                     /gene="oah"
                     /locus_tag="QF359_00525"
     CDS             complement(746..>1627)
                     /gene="oah"
                     /locus_tag="QF359_00525"
                     /EC_number="3.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018807 -
                     6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase"
                     /protein_id="HJO85423.1"
                     /translation="DVNAVVLTGAGHKAFCTGGNTKEYAEYYSGQDQEYRQYMRLFND
                     MVSTMLICDKPVICRVNGMRIGGGQEMGMACDFSVAQDMANFGQAGPKHGSAAIGGAT
                     DFLPPLIGVEQSMVSAVLCKPLSAHKAARLGIIMDTVPALKVDGKFVPNPLVVTEMVT
                     DDYGRPMHGEFKTDKEEIAKAKEIIASGEMDLSLLDSKVEELCTAVLHTFPECTTKSL
                     EQLRKPKLEVWNLRKEDARSWLGYNMLAEARTGFRAFNEGNKEIGREIDFIALRKARA
                     AGAPWSEELIESLIPRA"
BASE COUNT          366 a          442 c          453 g          366 t
ORIGIN      
        1 cgctgtcgca tcctgcagaa taccagcaaa ttattgacgc ctgtgagcgg atcaacctcg
       61 ataccagcgt tggggcggtt attttaaccg gcgcaggaac aagcttttgc gccgggggca
      121 atgttaagga tatgaaagag caatccggca tgtttagcgg agacccgttg gaaatcagcg
      181 ataaataccg ccacggcatc cagaaaattc cgctcgctct ttataatctt gaggcgccga
      241 ccattgccgc ggtcaacggg cccgccatcg gtgctggctg tgacctgacc ttgatgtgtg
      301 acattcgcct tgcctccgaa acagccaagt ttgccgaatc cttcgtccag ctcggcattg
      361 tcccgggcga tggcggcgct tggctgctgc aacgcaccgt cggtttatcc aaggcctatg
      421 agatggcttt taccggcgac accatcaccg cgcaagaagc tctggaatgc ggcttggtct
      481 ctaaatgtgt ggcgccggaa gaactgatga aggaaacccg ggtgatgacg gcgcgaatcg
      541 ttaaaaaccc gccccgcacg ctgcggctct ccaaaaaact gatgcgcgaa ggcatgcatg
      601 tccgcttgga tactttgctg gaaatgtccg ccgcctttca ggcgatggcg cataaaaccg
      661 acgaacatct tgagcagctc aataaaattt ccctcagccg agatgacagc cgagggaaaa
      721 aatagccgct ttaaatgcag taatactaag cgcgtggaat gaggctttcg ataagctctt
      781 ctgaccacgg tgcgccggca gcgcgggctt tgcgcagggc gatgaaatca atctcacggc
      841 caatttcctt attaccttcg ttaaaggccc ggaaaccggt gcgggcttcg gccagcatgt
      901 tgtaacctaa ccatgaacgc gcatcttctt tgcgcaggtt ccagacttcg agtttcggtt
      961 tgcgcaattg ctcaagtgat ttggtggtgc attccgggaa ggtgtgcaga accgccgtgc
     1021 aaagttcttc aactttggag tccagaagcg aaaggtccat ttcgccggaa gcgatgattt
     1081 ccttggcctt ggcgatttct tccttgtcgg ttttgaattc accgtgcatc gggcggccgt
     1141 aatcatcggt caccatttcg gtgacgacca gtggattggg cacgaacttg ccgtcaactt
     1201 tcagcgccgg aaccgtatcc ataatgatgc cgagccgggc agctttgtgg gccgacaggg
     1261 gcttacaaag aacagcggag accatggatt gttcgacccc gatcagtggt ggcaaaaagt
     1321 cggtggcgcc gccgatggcg gcagacccat gcttcggtcc ggcctggccg aaattggcca
     1381 tatcctgggc gaccgaaaag tcacaggcca tacccatttc ctggccaccg ccgatgcgca
     1441 tgccgttgac ccggcaaata accggcttat cacaaatgag catagtggag accatgtcgt
     1501 tgaacaggcg catatattgg cggtattcct ggtcctgccc ggaataatat tcggcgtatt
     1561 ctttagtgtt accgccggtg cagaacgctt tgtggccggc gccggttaaa accaccgcat
     1621 tgacgtc
//
LOCUS       DASCNL010000043         2177 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000133062, whole genome shotgun sequence.
ACCESSION   DASCNL010000043 DASCNL010000000
VERSION     DASCNL010000043.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000133062"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(341..1741)
                     /locus_tag="QF359_00530"
     CDS             complement(341..1741)
                     /locus_tag="QF359_00530"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO85424.1"
                     /translation="MPDQSFRTMLANLEQQGELIHFTKEVDPLVDMAAVEWKAFNELG
                     QSSLFSNIKGHEGWQACSQIVANRKKWAIGLNIEENVLLDQMAERIQTPIAAEMTVGN
                     APVKDIKKTGDEIDLYDFPTLMTSEKDGGRYFASGIAVIKDPDTGIRNLSVHRQMVTG
                     KDKTGFIMIPRQARQIYDKYCARGEAMPVAMVYGTHPAIFFASSFTTTFGNDEFGLAG
                     AIMEEPVRLVKCESIDLEVPAEAEIVIEGEVLPDHLEPEGPYGEVSGTYAGGMESEVF
                     QVKAITQRKDPIFYALHCGFPVTDAQSTMGIGVEVATKHHLKDVEGGLDLMDVRAVTE
                     SGDMMLILKMRPRHPGQTKTALMAALSGPYLHPKLAIAVDEDIDANDLRQIAWSMTTR
                     VHAERDVVMIPETRVFALDNISPTAPGMGSFARVGTKWLIDATIPAHLSEAERFDFEP
                     AMPKSFDTVNLEDYLP"
     gene            1928..>2177
                     /locus_tag="QF359_00535"
     CDS             1928..>2177
                     /locus_tag="QF359_00535"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85425.1"
                     /translation="MFKKILGLTIAAAVVTAVSPVMAPAQAKDIKIGFVTTLTTPAAL
                     IGKQMKMAVELAMDHIGHKMGGRNVKILFEDDGFNPKIG"
BASE COUNT          529 a          516 c          550 g          582 t
ORIGIN      
        1 tcgccgtcat acctcgcacc cgagaatagc gcgtcgaatt ccaccgcgat agcgcggtgt
       61 tccgtgaaat tggagcgttc ttcaagcgcg tttagttcat cgctgttgat aagttcttct
      121 agcattaaca ttacctccac accaaaagac tgtaagcatt acagaatttg gtggttattc
      181 atctgattta ttgtgtttga tcttccgcgt atagcgagtt gggtctcttt caattttagg
      241 tctgaacaac ggattttcgt gcagcgcccg ggcatgtgga ttacgctttt tcttgagtgc
      301 ccgggtctgt tgtttttttg ctttggccat gttcggaaca ctaaggcaga taatcctcta
      361 agttaaccgt atcaaaactc ttcggcatgg ccggctcgaa atcaaaacgt tccgcttcag
      421 ataaatgtgc tgggatggtt gcatcgatca gccatttcgt accgacccgg gcgaagctgc
      481 ccatgccggg tgccgtcggt gaaatattat cgagcgcgaa cactcgcgtt tctgggatca
      541 tcacgacatc acgttcggca tggacccggg ttgtcatcga ccaggcgatt tggcgaagat
      601 cgttggcatc aatgtcttcg tcaacggcga tggcgagttt ggggtggaga taaggaccgg
      661 aaagtgctgc catcaaagcg gtcttggttt gaccgggatg gcgcggtcgc atcttaagga
      721 tcaacatcat atcaccggat tcagtaacag cgcgcacatc catcaagtcc aagccacctt
      781 caacgtcttt gagatgatgc ttggtcgcga cctcaacgcc gatgcccatg gtcgattggg
      841 catccgtcac cgggaaaccg caatgaagcg cgtagaagat gggatctttg cgttgggtga
      901 tagcttttac ctggaacact tctgattcca tgccgccggc ataagtgccg ctaacctcac
      961 catacggccc ttcgggttca agatggtctg gcagcacttc gccttcgata acaatctcag
     1021 cttcggcagg tacttcaagg tcgatgcttt cacatttcac caggcggacc ggttcctcca
     1081 tgatggcacc ggcgagacca aattcgtcat tgccaaaagt tgtcgtaaag ctggaggcga
     1141 aaaagattgc cggatgggtg ccgtagacca tggcgaccgg catggcctcg ccgcgggcgc
     1201 aatatttatc gtagatttga cgggcctggc gcgggatcat aataaagccg gttttatcct
     1261 tgccagtgac catctggcgg tgaaccgaga gattgcggat accggtatcc gggtctttga
     1321 tcacggcaat gccggaagca aaatagcgcc caccatcttt ttctgaggtc atcaaagttg
     1381 gaaaatcata gagatcgatc tcgtcgccgg ttttttttat gtcttttacc ggcgcattac
     1441 caactgtcat ttcggctgct attggcgttt gaatacgttc cgccatttga tcgagtaaaa
     1501 cattttcttc aatatttaga ccaatcgccc attttttacg gttggcaaca atttgactgc
     1561 aagcctgcca gccctcgtga cctttgatat tgctgaacaa gcttgactgg cccagttcat
     1621 tgaaggcttt ccattccact gctgccatat caacgagagg atcaacttct ttggtgaaat
     1681 gaataagctc accttgctgc tctaggttgg ccagcatggt gcgaaaagat tggtcaggca
     1741 tatttaggac tccaaaatca gtggccccag actttatagg gctaagatga tggacacaat
     1801 aacgctcccc cattcctggt atcaaattta acttcttgta aacaaggtaa atattgttag
     1861 cataattcca aaatgtaaga attttgataa aatttgatct caaagaataa tgcagggaga
     1921 gcatttcatg tttaagaaaa tactaggttt aaccattgcg gcggcggtcg taacggcggt
     1981 ttcgccggtg atggcgccag ctcaggctaa agatatcaaa atcggttttg tcacgacgct
     2041 gacaacgccg gcggcgctga ttggtaagca gatgaaaatg gcggttgagt tggcgatgga
     2101 tcatatcggc cataaaatgg gtggccggaa tgtcaaaatc ctgttcgagg atgacggttt
     2161 taatccaaaa atcggca
//
LOCUS       DASCNL010000044         1572 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000133342, whole genome shotgun sequence.
ACCESSION   DASCNL010000044 DASCNL010000000
VERSION     DASCNL010000044.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000133342"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="QF359_00540"
     CDS             complement(<1..310)
                     /locus_tag="QF359_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85426.1"
                     /translation="MTPGKNPEKSHGKATAKTKSPKKHRAGKNKTPLQKPAALQIEFD
                     DNKLLPLLFGSHNAHLAKIEQKLDVLLNSRGNAVSISGPEDQAEAAYNVLTSLYNQAK
                     K"
     gene            complement(307..>1572)
                     /gene="miaB"
                     /locus_tag="QF359_00545"
     CDS             complement(307..>1572)
                     /gene="miaB"
                     /locus_tag="QF359_00545"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HJO85427.1"
                     /translation="CHIREKAAGKLFSELGRLRNIKERRLASGSSTVIAVAGCVAQAE
                     GVEIINCAPFVDIVLGLQTYHRLPEMVVRASRAATGPQKNKGILDIEFPDEPKFDHLP
                     EVTAKGFSAFLTVQEGCDKFCTFCVVPYTRGAEFSRPFEDVINEACTVAAGGVKEITL
                     LGQNVNAYHGEAIKGEPGSEAGLGLLIRQLAEIERIAHIRYTTSHPIDMADDLIAAHG
                     DVGELMPFLHLPIQSGSDRILSRMNRYHRIDDYRRMVDKLLAVRPDMKLSSDFIVGFP
                     GERDEDFEATMKIADEFQFIQTYSFKYSPRPGTPGALMQDQIPEFLQSERLVVLQELL
                     EKNQMTFNQESVGNVVSVLFDRRGRKDGQLVGRTPYMQPVHVQASDKMFGQIAEVKLT
                     TAHANSLGGELVTVANQPSPMNKIERVSA"
BASE COUNT          382 a          393 c          359 g          438 t
ORIGIN      
        1 ccttttttgc ctggttatat aggctggtca aaacattata ggcggcctcg gcctgatctt
       61 caggaccgga gatcgatacg gcattgcctc tggaattcaa taacacatct aatttttgct
      121 caatcttggc aagatgggca ttgtggctgc caaatagcag cggcagcaat ttattatcat
      181 cgaactcaat ttgcagggct gctggttttt gcaacggcgt tttatttttt ccagcacgat
      241 gttttttggg tgatttagtt ttcgccgtag ctttgccatg gctcttttct gggtttttac
      301 ctggagtcac gcgcttactc tttcgatttt gttcattgga ctaggttgat tggccaccgt
      361 aacaagttca ccacctaagc tgttggcatg agcggtcgtt aatttgacct cagcaatttg
      421 accaaacatc ttatcggagg cctggacatg aaccggctgc atatagggcg tgcgaccaac
      481 caattgcccg tcttttctgc ctcgtcgatc aaacaacacc gatactacgt tgccaacact
      541 ttcttgatta aaggtcattt gatttttttc gagtaattcc tgcagtacca ccaaacgctc
      601 actttgcaga aattccggta tttgatcctg catcaaagcg cccggcgttc ccggccgggg
      661 gctgtattta aatgaatagg tttgaataaa ttgaaattcg tcagctattt tcatggttgc
      721 ttcaaaatcc tcatctctct cgccgggaaa accaacgata aaatcggagg ataatttcat
      781 gtcaggccgc accgccaata atttatcaac catccggcga taatcatcga tccggtgata
      841 gcggttcatc cggctaagaa tccgatcaga gccggattga ataggcaagt gcaaaaacgg
      901 cataagctca ccgacatcgc catgcgccgc tatcaaatca tcagccatgt cgatcgggtg
      961 ggaggtggta tagcgaatgt gggcaatgcg ttcgatttcg gcaagttgac ggataagcaa
     1021 tccaagacca gcctcactac cgggctctcc ttttattgct tcaccgtgat aggcgttaac
     1081 attttgccct agcaaggtaa tctctttaac gccacccgca gcgacggtac aggcttcgtt
     1141 gataacgtct tcaaagggcc ttgagaattc agcgcctcgc gtatagggca cgacacaaaa
     1201 tgtgcagaat ttatcgcagc cttcctgcac tgttagaaac gccgaaaagc ctttggccgt
     1261 tacttccggc aagtgatcaa attttggctc gtccggaaac tcaatatcca agataccttt
     1321 atttttttgc gggccggttg cggcgcggct ggcgcgcaca accatttccg gtaagcggtg
     1381 ataggtctgc agacctagca cgatatcaac aaaaggcgca caattaatta tttccactcc
     1441 ttctgcctgg gcaacgcaac cggcgaccgc aatgacggta gaactgccac ttgccaatcg
     1501 gcgttctttg atatttctga gccggcccaa ttcagagaat aattttcctg ctgccttttc
     1561 gcggatatga ca
//
LOCUS       DASCNL010000045         4091 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000134441, whole genome shotgun sequence.
ACCESSION   DASCNL010000045 DASCNL010000000
VERSION     DASCNL010000045.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4091)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4091)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4091
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000134441"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..639)
                     /locus_tag="QF359_00550"
     CDS             complement(<1..639)
                     /locus_tag="QF359_00550"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO85428.1"
                     /translation="MTDLIDGTHRLRAVGLSKRFGGLIAVTGFSFDLAAGEILGIIGP
                     NGAGKTTTFNLIAGALVPNSGELWLGQTSLVGLKPYQIAELGIIRTFQHNMPFETLSL
                     IDNVMVGAHRRIRGSLWAVLGLTQETREREAHYRERARELIDFVGLGEFVDTKVDNLS
                     FGQGRLLEVARALAGEPEVILFDEPAAGLTLSETEQLAQVIRRISSDGISVLL"
     gene            complement(636..1583)
                     /locus_tag="QF359_00555"
     CDS             complement(636..1583)
                     /locus_tag="QF359_00555"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO85429.1"
                     /translation="MSRVWLSWLLGIVAIVALSLILEGYVGDLYRKLLLTVALCLSFN
                     YLFGISGQLAFSHIAFYGIGAYGVVILTYKVGLPLPLAIIGAVISCGLLSFIVAVPAT
                     RLKGFYLALATLAFAQLFNVLLLQGGDITGGPEGISGFSAKGYFGVPSSGGAYTVVIA
                     GILIFTFAILLLLDRSWFGRACRAIRDNEAAAEAMGVNIFRTKVAAFVVTSTLSGIAG
                     ISYAFADNYINPTVFTLEPLFLLLFMIIVGGTGRHAGAILGAVVLFLAPEMLEAWIGR
                     HYLLGFGVVMVLVILFLPSGLIGLVDRFQDRLAAHGDRQ"
     gene            complement(1580..2461)
                     /locus_tag="QF359_00560"
     CDS             complement(1580..2461)
                     /locus_tag="QF359_00560"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO85430.1"
                     /translation="MEDFLELMVSVCEAGSIYGLVALAYQIVLRPTGIINFAAGEWAA
                     IGAFAAVSFITWWKLPLIIGLPMCILAVGLVGWLTEVIAVQPLLKRDAPELSPVLSLL
                     GMLIIYRETVSSVYGVDNLFVPMPFGFGRVELGSIAGTSQSFFIIITVVFSFTLVWLF
                     FERTMWGKAFQAVAINRVAAALLGINLRLVTAMSFAIGGAVAGLAGVLLAPITSVHFL
                     MGLPLAVKGFTALVIGGVGRVEGALLGGLLLAFVEKVTIRYAPIPSGLALGAPFLLLI
                     LFLLLRPSGLLRARGEQ"
     gene            complement(2493..3659)
                     /locus_tag="QF359_00565"
     CDS             complement(2493..3659)
                     /locus_tag="QF359_00565"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85431.1"
                     /translation="MRTKYNIKWYGLFSAILLVAAGLWSATATAQDTIKVGIITDRVG
                     NSAAWAKPIEAGLELALSEINGAGGVLGKKIELVYESDQSKPDVSATKARKLIDAGVV
                     AILSITNSPSTQQAQTVTMNAKMVHMTPANSAGYLTTKLKNPYFFQMGPLGSTQIRTL
                     MAYNKKNNFKRVALVKDNSGLGTYLGKIFRQSLEAGGTKVVAEQTIEIGSTDAIPQMQ
                     KVRAAKPDAIYHSGIVVSAMATFFKAYHQLGLKQPVLGSFNLSIPKYLEVIPGMMEGV
                     AFIDAYDPDKAQSKAFAAAYKKKHGKTPFSLPAYGYDGLKVLVSAIKRAGSTNNEKLR
                     SAMAATKGYVGVLGAKGQSVNFTKNRAGFSVDGAVVRIIKKNTHGPVVHSGTKN"
BASE COUNT         1098 a         1091 c          969 g          933 t
ORIGIN      
        1 caatagaacg gaaatgccgt cactgctgat ccgccggata acctgggcca gttgttcggt
       61 ttcgcttaag gtgagaccag cggcaggttc gtcaaataag atcacttcgg gctctcccgc
      121 caaggcacga gccacttcca acaaccggcc ctgaccgaat gacagattat cgacttttgt
      181 atcaacgaat tcgcccaggc caacgaaatc aatcaattct cttgcccgct cccggtagtg
      241 cgcctcgcgt tcgcgcgttt cctgagtcag gcccagcacg gcccacaaag accctcgtat
      301 tcggcggtgg gcaccgacca ttacattatc tatcaagctc agcgtttcga acggcatatt
      361 gtgctgaaaa gtgcggatga ttcccagttc ggcaatttgg tagggcttga gacccaccaa
      421 ggaagtctgg ccgagccaca gttctccgct attgggcact aaggcaccgg caatcaggtt
      481 aaaggtcgtc gttttaccgg caccgttggg gccaataata cccagaattt cgccggctgc
      541 cagatcgaaa ctaaaaccgg taaccgctat caagccgccg aaccgcttgc tcaatccgac
      601 cgctctcaac cggtgcgtgc catcgattag gtcagtcatt gccgatctcc gtgagccgct
      661 aaacggtcct ggaagcggtc taccaatccg atcagccctg atggtaggaa taaaattacc
      721 agcaccatga cgacgccgaa acccaacagg tagtgcctac ctatccaggc ctccagcatt
      781 tcgggagcca ggaatagcac taccgcacca agtatcgcgc cagcgtggcg accggtgccg
      841 ccgacaatga tcatgaacag cagcagaaac agaggctcca gcgtgaacac cgtggggttt
      901 atataattat cggcaaaggc gtaggagata ccggcgatac cagaaagcgt actggtaacg
      961 acgaacgcgg ccactttagt tcggaagata ttcactccca tagcctcagc agcggcttcg
     1021 ttgtctcgaa ttgcccggca agcccggcca aaccaggatc ggtccaacag taacaatatg
     1081 gcgaaagtga atatcagtat tccggctatg accacggtgt aagcgccgcc gctcgacggc
     1141 acaccaaaat aacccttggc ggaaaaaccg gaaattccct ccggaccgcc ggtgatgtcg
     1201 ccgccctgta acaacagcac attgaacaac tgggcaaagg ccagggtcgc caaagcgagg
     1261 taaaatcctt tcaagcgggt tgcgggtacc gcgacaataa acgacagcaa accgcaacta
     1321 atcaccgcac cgataatcgc cagcggtaac ggcagaccga ctttgtatgt cagtatgacg
     1381 actccgtagg caccaatacc gtaaaaggcg atatgagaaa aagccaattg tccggaaatg
     1441 ccaaacagat aattaaagct taggcacagc gccacggtca gcaataattt tcggtataga
     1501 tccccaacat aaccctccag tattaatgac agagccacga tggcaacgat ccccagcagc
     1561 catgacaacc acactcggct cattgctcac ccctggcccg caataagccg cttggtcgca
     1621 ataagaggaa taaaattaat agtaaaaaag gcgcaccgag tgccaaaccc gatggtatag
     1681 gggcatagcg gatggtaact ttttcgacga aagccagcag caatccgccc agtaaggcgc
     1741 cttcaactcg acccacacca ccgatcacca gcgctgtaaa tcctttaacc gccaaaggta
     1801 ggcccatcag aaaatggacc gaagtaatgg gtgccagcaa gacacctgcc aagccagcga
     1861 ccgcaccgcc gatggcaaaa gacatcgccg tcaccaagcg taaattaata cctagcaaag
     1921 ccgccgcaac gcgattgatt gccaccgcct gaaaagcctt gccccacatg gtgcgttcga
     1981 agaataacca gaccagcgtg aaactgaaga cgacggtgat tataataaaa aagctctggc
     2041 tggtaccggc gattgaaccg agttcgacgc gcccaaaacc gaatggcatc ggcacaaata
     2101 aattgtcgac cccatatacg ctgctgacag tttcgcggta gattataagc atccctaaca
     2161 aactgagtac gggacttaat tccggtgcat cgcgcttcaa aagcggctga actgctatga
     2221 cttcggtaag ccagcccact aaaccgacag ctaaaatgca catcggcaaa ccgataatga
     2281 gtggtagttt ccaccaggtg atgaagctaa ccgcggcaaa agcgccaata gcagcccact
     2341 caccagcagc aaagttgatg atgccggtgg ggcgcaggac tatctgataa gcaagtgcga
     2401 cgaggccgta aatactacca gcctcgcaga cactgaccat cagttcaaga aagtcttcca
     2461 ttttaaagaa cgatggccaa acggttgacg ttctagttct tggtgccgct atgtaccact
     2521 ggtccgtgcg tatttttttt gataatccgc acgacagcgc catcgactga aaatccagcc
     2581 cggtttttgg tgaaattcac cgattgccct ttggcaccga gcacgccgac gtatcctttg
     2641 gtggcagcca tggcgcttcg cagtttttcg ttatttgtac tgccggctcg ttttattgcc
     2701 gagaccaaca ccttcaaacc gtcataacca taggctggca aggagaacgg cgtcttacca
     2761 tgttttttct tgtaagccgc tgcaaaagcc ttggattggg ccttatccgg atcgtaggca
     2821 tcgataaagg caacgccttc catcataccg ggaatgacct ccagatattt gggtatcgac
     2881 aggttaaacg atcctagcac tggttgtttc aggcccaatt gatgataagc cttaaagaaa
     2941 gtcgccatgg ccgaaaccac gattcctgag tggtagatgg catctggttt ggcggcccgg
     3001 actttctgca tttgcgggat ggcatcggtc gagcctattt cgatggtttg ctcagccacc
     3061 actttggtgc cacccgcttc aaggctttgt ctaaaaattt tgcccaaata tgtgccaagt
     3121 ccggaattgt ctttaaccaa ggcaacgcgc ttgaaattat ttttcttatt gtaggccatc
     3181 aaggtcctaa tttgcgttga tcccaaggga cccatctgga aaaaataggg gttcttcagc
     3241 ttggtggtca ggtagcccgc tgaattcgct ggagtcatgt ggaccatctt tgcattcatg
     3301 gtgaccgttt gggcttgttg ggtagacggc gaattggtga tgctcaagat ggcgacaacg
     3361 cctgcatcga tcaatttccg cgctttggtc gctgacacat cgggcttgct ttgatcgctc
     3421 tcgtatacga gctcgatttt cttacccaat acgccaccgg caccgttaat ttctgaaagg
     3481 gccaattcca agccggcttc aatcggcttt gcccaggcag cggaattgcc cacccgatcc
     3541 gtaataattc ccactttgat tgtatcttgt gctgtggcag ttgctgacca tagccctgcg
     3601 gcaactaaaa gaatagctga gaatagtccg taccatttga tgttatattt ggtcctcatt
     3661 ttaactccct ttcctgttct aatatttgca aaatttagaa tttagttctg gtaaatcagt
     3721 ttcccaattt caaatattgg atattttgac tcaatgctga ctgtaagagc tttcatttat
     3781 tactttcgat tgattacatg ttcaattttt tcaatgattt actatttctt tttactgtac
     3841 gtagcagcaa cgatcttgcc aatggcaaaa agcaataatt tccgtcataa aggcagactc
     3901 cttaatatta aggtgctgtc agacgaatgc gaactcgtct cagcgtggca ataataagcc
     3961 aattttatgc agcacaaagt ggtgctatca gacgaatgcg aactcgtctc agtgtggcaa
     4021 aaaatgcggt ggttttatgc agcacagagt tgctgccact caacaagagc agcgtataga
     4081 gacacgaaag g
//
LOCUS       DASCNL010000046         1136 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000138262, whole genome shotgun sequence.
ACCESSION   DASCNL010000046 DASCNL010000000
VERSION     DASCNL010000046.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000138262"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /locus_tag="QF359_00570"
     CDS             <1..239
                     /locus_tag="QF359_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043742958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HJO85432.1"
                     /translation="KEVEQRCHLSASPALTRTRHRVALERCLQNLRRFPEVTETELKA
                     EDLRHAARALGRITGRVDVEEILDKIFKEFCIGK"
     gene            438..>1136
                     /locus_tag="QF359_00575"
     CDS             438..>1136
                     /locus_tag="QF359_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO85433.1"
                     /translation="MTKTFTHKSYDVIVVGGGHAGSEAAAVAARVGAETLLLTHKLET
                     IGEMSCNPAIGGLAKGQLVREIDALDGIMGKAIDHAGIQFRMLNQSKGPAVRGPRAQA
                     DRKLYRQAIFDLLDAQANLDLKAAAVEDLLIDGQGQIKGIRTGEGKEFLAPKVIITTG
                     TFLRGVIHVGEEQTPAGRVNEAPALGLSTTLERLGFHLGRLKTGTPPRLDGKTIDWVS
                     LTEQPGDKPPVPFSY"
BASE COUNT          276 a          276 c          294 g          290 t
ORIGIN      
        1 aaaaagaagt tgaacaacgc tgccatttat cagcctctcc tgcccttacg cgcacccgcc
       61 atcgcgttgc gcttgaaagg tgtctccaaa atctcaggcg ttttccggaa gtaaccgaaa
      121 ctgagttaaa agcggaggat ttacggcacg ccgcccgggc tttgggtcgc attaccggcc
      181 gtgttgatgt cgaagaaata ctggataaaa tttttaaaga attctgcatc ggcaaatgaa
      241 ggctttgaac ggctacaatg tttcacgtga aacagtactg gagtggcact ctatatatat
      301 ccctttaatt ttcatcccaa aataatgatt ttattttggt gtagtattta acttgcctaa
      361 ggtggcaaca aattagtttt gatttggcta ttctctctaa ttgacttcgt cttcaagccc
      421 acctacattc tcgcgccatg acgaagactt ttacgcataa atcttatgat gttatcgttg
      481 ttggtggtgg tcatgccggc agtgaagcgg ctgcggttgc ggcgcgcgtc ggggcagaaa
      541 cgctgctgct gacccataag ctcgaaacca tcggtgaaat gtcttgcaat ccagccattg
      601 gcggcttggc caaaggtcag ctggtgcgcg agatcgacgc ccttgatggc ataatgggaa
      661 aagcaattga ccacgccggt attcagttcc gcatgcttaa tcaaagtaaa ggtccggccg
      721 tgcgtggacc ccgggcgcaa gcggaccgca agctatatcg ccaagccatt tttgatctgt
      781 tggacgcgca agcaaacctc gacctaaaag ctgctgcggt ggaggatttg ctaattgatg
      841 gtcaaggaca gattaaaggt attaggaccg gcgagggtaa agagtttctt gcgccgaagg
      901 taattatcac caccggcact tttttacgcg gtgttatcca tgttggcgaa gagcaaacac
      961 ctgccggccg ggttaacgag gcgcctgccc ttggtttgtc tacaacctta gaacgcttag
     1021 gctttcactt gggccgcctg aaaaccggta cgccgccgcg ccttgacggt aagaccattg
     1081 attgggtgag tttgaccgag cagcccggtg acaaaccgcc ggtgccattt tcctat
//
LOCUS       DASCNL010000047         1586 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000139021, whole genome shotgun sequence.
ACCESSION   DASCNL010000047 DASCNL010000000
VERSION     DASCNL010000047.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000139021"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            84..761
                     /locus_tag="QF359_00580"
     CDS             84..761
                     /locus_tag="QF359_00580"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:NF005089.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HJO85434.1"
                     /translation="MNGVPWWYFYKLDGDYHDKRLESIDPGNGQWDKIGPERIIGCVV
                     YPAAEVREPGIIQHVEGNRFSLGEPSGEKTERVQILAKELSNAGFRVPIRPRIRDELW
                     VKLWGNLSFNPMSVLTGKTLKEMGKDPKIRSTIRDMMLEAQTVGEKIGVKFLVDVDKR
                     IEGATAVGAHKTSMLQDYERGRPMEINALVGAVSEMGILTRTPTPTIDRVLAEVIQQA
                     RLAGCYE"
     gene            771..>1586
                     /locus_tag="QF359_00585"
     CDS             771..>1586
                     /locus_tag="QF359_00585"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HJO85435.1"
                     /translation="MALLPLKDDNELTRINFQYVTVTLIIVCISVFLWQLSLGEEQGR
                     YIFGLGTIPAVLFGSRDLSPDLILVPETFTMVTSLFLHGGWMHLIFNMLFLWVFGDNV
                     EDAMGHLRYIVFYLLCGVLATLSHAVMEAGSEAPLIGASGAISGVLGAYLVLHPKARI
                     LVLFMNIIPLHLPAILVLGSWIGLQFISLNSDDGTAWWAHIGGFLAGMILVVPFRRKD
                     VPLFDGAGRFAPDNPNVIDLAERQHGRSIFPNTIIVNRTPGPWDKPKSQPLNVV"
BASE COUNT          360 a          372 c          445 g          409 t
ORIGIN      
        1 cacgctcaaa gctcattcgg taccgggtat tgtcgaggcg atccagccca tgatggggcc
       61 agatacggct gttgtctggg ggcgtgaatg gggtaccgtg gtggtatttc tacaaattgg
      121 atggcgatta tcatgacaaa cgtctggaga gcattgaccc cggcaacggc caatgggaca
      181 agataggccc ggagcggatt atcggctgtg ttgtttaccc ggcggccgaa gtgcgggagc
      241 caggcattat ccagcatgtt gaaggcaatc ggtttagcct cggtgagccg agtggagaaa
      301 aaaccgaacg cgtgcagata ttggcgaaag agctatcgaa cgctggtttt cgcgtgccga
      361 tccgcccacg cattcgtgat gaattgtggg ttaagctgtg gggtaattta agctttaatc
      421 cgatgagcgt tttaaccggt aaaacgctca aagagatggg caaagatccg aaaattagat
      481 caactattcg agatatgatg ttggaagcac aaaccgttgg tgagaaaatt ggcgtgaagt
      541 ttctagttga tgtcgataaa cgtatagagg gtgcgacagc tgttggtgct cacaaaacat
      601 cgatgttgca ggattacgag cgcggccggc caatggaaat taatgctttg gttggtgcgg
      661 tctcggaaat gggaatatta accaggactc caacgccaac gatagaccgg gttttggcgg
      721 aagtaataca acaggcccgt ctcgccggat gctacgaata aggaattctg atggcgttat
      781 tgccgctcaa agatgacaac gagttaacgc gaattaactt tcagtatgtg acggtcacct
      841 tgataatcgt ctgtatctcc gtgtttttgt ggcagttgtc actgggcgaa gaacaaggcc
      901 gttacatctt tggccttggc accattcccg ccgtgctatt cggctcgcgt gatttgagtc
      961 cagatctcat tttagtcccg gaaactttca ccatggtcac cagcctgttt ctccacggcg
     1021 gctggatgca cctgattttc aacatgttgt ttctctgggt cttcggcgac aatgtcgagg
     1081 atgcgatggg tcatttacgc tatattgttt tctacctgtt atgcggcgta ctggcgacac
     1141 tatcccatgc ggtgatggag gctggttccg aggccccctt aatcggtgcc agcggggcga
     1201 tttccggcgt gctcggcgcc tatctcgtac ttcaccctaa ggccagaata ttggtcctgt
     1261 ttatgaacat aatccctttg cacctgccgg ctattctggt gctgggcagc tggatcggct
     1321 tgcagtttat cagtttgaac tcagatgacg gcaccgcctg gtgggcgcac attggaggtt
     1381 tcctcgctgg catgattttg gtagttccgt tccggcgcaa agacgtaccg ctatttgacg
     1441 gcgctggtcg atttgccccg gacaacccca atgttattga tctggctgag cgtcaacacg
     1501 gcagatcgat ttttcccaac acgataattg ttaatcgaac acctggaccc tgggataaac
     1561 ccaagagcca gccgcttaac gtcgtc
//
LOCUS       DASCNL010000048         2076 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000141340, whole genome shotgun sequence.
ACCESSION   DASCNL010000048 DASCNL010000000
VERSION     DASCNL010000048.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000141340"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1994)
                     /locus_tag="QF359_00590"
     CDS             complement(<1..1994)
                     /locus_tag="QF359_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85436.1"
                     /translation="MLHVKDDVLVKVEGDPDSPFNQGRLCPIGNATKEMVYHPDRLKY
                     PMRRKGERGSGDWQRLSWDDVLDEIAEKLTQIKAEFGAEAVHLGTGTGRHHIRWVSRF
                     AYSFGSPNWSEPGFAQCFHPRVNACTQTMGDFPVSDFLSDITAEVICFWGHQPLNSGP
                     DGETRFNARDGLKASSRNIVVDPRETYLAKKADLWLQLRPGTDDALALAIIHVIIEEG
                     LQDKEFVDNYTHGFDELAARVKDMTPEWAEEITWVPADKIREAARMFATIKPALMEWG
                     VALEQTPNCIQTVRAVSLIPSITGNIDVPGGWVMGMHGLGPVPSNIENLSPEQNTKRL
                     GFEHFKMLCGEGAALPAAHIPTVLKAMRTGKPYPVKAFLIFGNNTLTTYGNSKVVYES
                     LMNLDFMVNADLFMTPTAELADIVLPAAFWPEINEVAGLPTIAGNVVVSNQQAVRTYE
                     CKSDEEIFSELARRLNLDVGTETPEEVYEQQMVAGGTGLTFEELKKIGFYEVPMKYRK
                     YETDGFKTPTGKLELYSVRFEEMGYDPLPNYSEPPESPVSQPELAKDYPLILTTGGRI
                     PFFFNSEGRQINSCRKGACEPQAEIHPETAVKIGIENGEWMWIENSRGKIRQRAKVTE
                     GIDPRVINTEFGWWFPEDPAPEYGVWKSNANVLTSVEPPF"
BASE COUNT          479 a          543 c          525 g          529 t
ORIGIN      
        1 tcaaacggtg gctcaacact agtcagcaca ttggcatttg atttccagac accgtattca
       61 ggcgccgggt cttccgggaa ccaccagcca aactccgtat taataacgcg aggatctatg
      121 ccttcggtta ctttggcgcg ttgacgaatt ttgccccggc tgttttcaat ccacatccac
      181 tcaccgtttt cgataccgat tttgacagcg gtctcgggat gtatttcagc ctgtggttcg
      241 caggcgcctt tgcggcatga gttgatttgg cgtccctcgg aattaaagaa aaatggaatg
      301 cggccaccgg tggtcaatat aagcggataa tccttggcca attcgggctg agaaacaggg
      361 ctttccggtg gttccgagta gttcggcagc ggatcgtaac ccatttcttc aaagcgcacg
      421 gaatagagtt cgagcttgcc ggtcggtgtc ttaaagccat cggtttcata tttgcggtat
      481 ttcattggca cttcgtaaaa gccgattttt tttagctcct caaaagtaag acctgtgccg
      541 ccggccacca tctgttgctc atagacttcc tcaggggttt ctgtaccaac atcaagatta
      601 agccgtcttg ccagctcaga aaaaatttct tcatccgatt tgcattcata agttctaact
      661 gcctgctggt ttgaaacaac cacattgccg gcaatggtcg gcaatccggc aacctcgttg
      721 atctcgggcc agaaggctgc tggtaataca atatccgcaa gctctgctgt cggcgtcata
      781 aacaaatccg cattgaccat aaaatcaagg ttcatcagcg attcataaac aaccttgctg
      841 ttgccatagg tcgtcagagt attgttgccg aaaatcagaa aggctttaac cggatagggc
      901 ttgcccgtcc gcatcgcttt caggacagtt ggaatatggg ccgccggcag agcagcccct
      961 tcaccacaga gcattttgaa atgctcaaaa ccgagacgtt tggtgttttg ttcaggcgat
     1021 aaattttcga tattgcttgg caccgggccg agcccgtgca tacccataac ccagccgccc
     1081 ggcacatcga tattgccggt aatcgagggg ataagagaga ctgcccggac ggtctggata
     1141 cagttaggag tttgttcaag cgcgaccccc cactccatca gcgctggttt gatcgtcgca
     1201 aacatacggg cagcttcgcg gattttatct gctggcaccc acgtgatttc ctctgcccat
     1261 tccggcgtca tatctttaac gcgagcggcc agttcatcga acccatgggt ataattgtcg
     1321 acaaattctt tgtcttgtag cccttcttca ataattacgt ggattatggc tagcgccagc
     1381 gcgtcatcgg tgcccgggcg gagttgcagc cacaaatcag cctttttggc cagataggtt
     1441 tcacggggat caacaacgat gttgcgagaa ctggctttga ggccatcccg ggcattgaaa
     1501 cgggtttcac catcgggacc tgagttcaac ggctgatggc cccaaaagca gataacttcg
     1561 gccgtgatat cgctgaggaa atcactgacc gggaaatctc ccattgtctg cgtacaggca
     1621 ttgacacgcg ggtgaaagca ttgagcgaag ccgggctcac tccaattggg gctgccgaaa
     1681 gaataagcga agcgcgacac ccagcgaata tgatggcggc cggtaccggt gccaaggtga
     1741 actgcctcag cgccaaattc agctttaatc tgcgtcagtt tttcggcaat ttcatcgagc
     1801 acatcgtccc agctaaggcg ctgccaatcg ccggagccgc gctcaccttt gcgccgcatc
     1861 ggatatttaa gccggtcagg gtggtagacc atttctttgg tggcattgcc aatgggacag
     1921 agacggccct gattgaacgg actgtctgga tcaccttcga cttttaccag cacatcgtct
     1981 tttacatgca gcaaggtacc gcagccgcca tgacaacttc ggcacacgct tttgaggatt
     2041 tgtgtgtctt gatgtgttgt ttgtagttta gtttca
//
LOCUS       DASCNL010000049         1865 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000142174, whole genome shotgun sequence.
ACCESSION   DASCNL010000049 DASCNL010000000
VERSION     DASCNL010000049.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000142174"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..681)
                     /locus_tag="QF359_00595"
     CDS             complement(<1..681)
                     /locus_tag="QF359_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HJO85437.1"
                     /translation="MYKRFSILILVLFALGACAETQLLVHTAKQIGRSTKPEPAQQGR
                     YKIGNPYQIKGVWYYPTVDYGYNKTGIASWYGPGFHGKRTANGETYDQNALTAAHKTL
                     PMPSIVQVTNLENGRSIKVTVNDRGPYAFGRIIDMSRRGTQLLGFHRKGTARVRVTIL
                     ENESRMLAQQLKSGAVLAKIGMPIRRDIDVAKPGVASESLLPPPGAKNASKPAPRYIP
                     REKMVASRE"
     gene            complement(771..1751)
                     /locus_tag="QF359_00600"
     CDS             complement(771..1751)
                     /locus_tag="QF359_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HJO85438.1"
                     /translation="MRRVFVLVCAGLLLALPAQAAEQKDLTAWLKELRSEALAKGIHA
                     ETFDQAFTGFKPIHRIIELDRRQPEFTMTFPKYLSRVVPKSRVMRGRAKYKENKKLID
                     KIGKKYGVQPRFIMAFWGVETGFGRHFGGFSVVHSLATLAFDGRRSKFFRGELHRALR
                     ILNKGHISHAQMKGSWAGAMGNFQFMPSSFETFAVDYDGDGKRDIWNNKGDAFASAAN
                     YLSRSGWRQDQTWGRAVKLPKDFDSLLIGLKVKKKISEWQKLGVRRPDGKNLPTRDLT
                     ASLVIARNKKTEKVGRAFMVYNNYRVTLKWNRSTFFAVAVGTLAERIGTK"
BASE COUNT          448 a          492 c          438 g          487 t
ORIGIN      
        1 ctcccgactg gcaaccattt tttcgcgcgg tatgtagcgt ggagcaggtt tactggcatt
       61 tttagcgccg ggtggtggta atagtgattc gctggcgaca cccggtttgg cgacatcgat
      121 atcgcggcgg atgggcatgc caattttggc caaaacagca ccgcttttaa gctgttgtgc
      181 cagcatccgg ctttcattct ctaatatggt gactcgaact ctcgctgttc ccttgcgatg
      241 aaatcccaac agctgcgtac ctcgccggga catatcaatg atccggccaa aggcatacgg
      301 gccccgatca ttcacggtta ctttaatcga gcggccattt tcgagattgg tgacttgaac
      361 gatgctcggc atcggcaagg ttttatgcgc tgccgttaac gcgttttgat cataggtctc
      421 gccgttcgct gttcttttgc cgtgaaaacc cgggccatac caggaggcaa tgccggtttt
      481 gttatagcca tagtcaaccg taggataata ccagacgccc tttatctgat atggattacc
      541 gattttgtag cggccctgct gagccggctc tggtttagtg ctgcggccaa tttgttttgc
      601 ggtatgaact agcaattgag tttcggcaca agcacccagc gcgaacaaaa ccaaaattaa
      661 aattgaaaaa cgtttataca ctcttacccc gcgaagattc gctgtagcgg actttgggta
      721 cactatattc attaacagga cgtttcgaaa ctgtggcaac cacttaaatg ttatttagtt
      781 ccgatgcgtt ccgccagtgt gccaacggca acggcaaaga aggtcgaccg gttccatttc
      841 agtgtaacgc gataattatt atataccata aaggcgcgac ccaccttttc agtttttttg
      901 tttctggcaa tgaccagcga cgccgtgaga tcccgggtcg gcaggttctt tccatctggc
      961 cgccggacac ccagtttttg ccattcgcta atcttctttt taacttttag cccaatcagt
     1021 aacgaatcaa aatcctttgg cagtttgacc gcccgccccc aagtctgatc ctgccgccag
     1081 cctgaccgag ataaataatt agctgccgaa gcaaaggcat cacctttatt gttccagata
     1141 tcgcgttttc catcgccatc gtaatcaacg gcaaaagtct caaagcttga cggcatgaac
     1201 tggaaattac ccattgcacc ggcccaagag cctttcattt gggcatggct gatatgcccc
     1261 ttgttgagaa tgcggagcgc acgatgcagt tcgccccgaa aaaatttgct gcgccgccca
     1321 tcgaaggcga gcgtcgctaa ggaatgcacc actgagaagc cgccgaaatg ccggccaaag
     1381 cccgtttcaa cgccccagaa ggccatgata aagcgcggct ggacaccata cttcttaccg
     1441 attttatcga tcagtttctt attttccttg tacttggcgc gcccccgcat cacccgtgat
     1501 ttcggcacca ccctgctgag gtatttcgga aacgtcatgg tgaattcagg ctgtcggcgg
     1561 tcgagttcaa tgatcctatg gatcggctta aagccggtga atgcttgatc aaaagtttcg
     1621 gcgtggatgc ctttggccaa tgcttcagag cgtaattcct taagccaggc cgtcaaatct
     1681 ttttgttcag ccgcttgggc aggaagtgca agcaacaacc cagcacacac caacacaaaa
     1741 actcgcctca tatttatttc cttaatctca aggtttcgga tagagctcat ttgtacggcc
     1801 agatagccaa taaaaggtta atcccatcca ttcatgaagc gatgtcgaaa gcgagcttaa
     1861 accag
//
LOCUS       DASCNL010000050         3827 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000142261, whole genome shotgun sequence.
ACCESSION   DASCNL010000050 DASCNL010000000
VERSION     DASCNL010000050.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3827)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3827)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3827
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000142261"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="QF359_00605"
     CDS             complement(<1..345)
                     /locus_tag="QF359_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HJO85439.1"
                     /translation="MAGHKKLKLNQILEGDSVEMMKTLPSASVDIIFADPPYNLQLEG
                     ELLRPNNSKVDAVDDEWDQFESFAVYDKFSRSWLTEARRVLKETGTLWVIGSYHNIFR
                     IGTALQDMGFWML"
     gene            complement(449..1075)
                     /locus_tag="QF359_00610"
     CDS             complement(449..1075)
                     /locus_tag="QF359_00610"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HJO85440.1"
                     /translation="MPDFEYENRLVEKGISRIAGIDEAGRGSWAGPVVAAAVILDREN
                     MSGALLTGLEDSKKLTAPKRYALFEALQQSVECGVGIASVEEIDTVNILQATFLAMAR
                     AVESLSSPPEFALVDGNKVPLIFCPAEAIVKGDSRSLSIAAASIFAKVTRDRIMTKLS
                     ESHPGYAWENNMGYGTKAHQAGLERLDITEHHRKSYKPIINILSREDS"
     gene            complement(1079..1435)
                     /locus_tag="QF359_00615"
     CDS             complement(1079..1435)
                     /locus_tag="QF359_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF952 domain-containing protein"
                     /protein_id="HJO85441.1"
                     /translation="MPAGPIYYICRADEWALAQTSGSYNGSSQDQADGFIHFSSGAQV
                     IESVAKHRAGQDRLVLLEVDPTALGDALKWEPSRNDMLFPHLYGDLPVAAVIRTFELN
                     LDLDGRHIFPEGWDLG"
     gene            complement(1441..1866)
                     /locus_tag="QF359_00620"
     CDS             complement(1441..1866)
                     /locus_tag="QF359_00620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85442.1"
                     /translation="MRTKLERDDFIALLEKLNSEDEADVLAAARDINAKMTVAGVTWD
                     DLLMSQGDASTESDHSDDDEDEGEAEQSNDDDDDSDLNPLSAEEKAEASSLIAAIRGL
                     EISDATKSELEEYEDDLEQGEFEQMDLRYLKALKTRLSA"
     gene            complement(1937..3022)
                     /locus_tag="QF359_00625"
     CDS             complement(1937..3022)
                     /locus_tag="QF359_00625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HJO85443.1"
                     /translation="MDMLSDQLQKGRGAVGNPAGRFEQTARIAVDDGWWAAENESDLA
                     HKLQTKIRPDAARSVITRNQSPDIPFDRSINPYRGCEHGCVYCFARPSHAFLDLSPGL
                     DFETRIFFKEYAAALLEKELRKPKYTPAPMALGVNTDCYQPAERELMITRSILEVLNA
                     FNHPFSIITKSAGILRDLDILTSMAERNLVHVMISVTTLDRDLARKMEPRAATPERRL
                     KTMQALNDAGVPTGVLVSPMIPGLNDPEIEKILAVCAEAGAVQAAYLLLRLPYELKLV
                     FTDWLEAHYPDRARHVLSLIRQCRSGKLNDSEFGQRFTGEGPYAEIIQRRFHLAQKKL
                     GLPERILDLNCSQFEAPLALGGQMGLF"
     gene            3130..3801
                     /locus_tag="QF359_00630"
     CDS             3130..3801
                     /locus_tag="QF359_00630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04283 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HJO85444.1"
                     /translation="MLSIIIPTLNAAAAIERTLTALGTPEIATQIIVSDGGSTDETRS
                     IAERYGATVINAPKGRGSQLAAGADRATHPWLLFLHADTLLDAAWPQTFIAFVASPMT
                     PPRAGVFKFTLDDPAPAARRLEKIVVWRCRLLGLPYGDQGLLISRQHYDQIGTFKGLP
                     LFEDVEIVRRIGRHNIEYLELPAITSAVRYQKSGYVLRTLRNATCLSLYFAGLSPKLI
                     GRLYQ"
BASE COUNT          943 a         1011 c          905 g          968 t
ORIGIN      
        1 gagcatccaa aaacccatat cctggagcgc cgtaccaatg cgaaaaatat tgtggtagct
       61 gccgatcacc cagagcgtgc cggtctcctt gagcactcgt cgtgcttcag tgagccagga
      121 acgggaaaat ttatcgtaaa cggcaaagct ttcgaactga tcccattcgt cgtcaaccgc
      181 gtcgactttg gaattgttag gacgcagcaa ctctccctct aactgaagat tataaggggg
      241 gtctgcaaag atgatgtcta ccgatgcact cgggagggtc ttcatcatct cgacgctatc
      301 gccttcgaga atctgattca atttcaactt tttgtggcct gccataaccg gcgcatactg
      361 agtctttggc gattcaccgt caagaactat ttgaaatcaa tggtttaagg gggacttagc
      421 agtggtcaca aactacaata tgtgggagtc aagaatcttc acgcgacaag atgttgatta
      481 tcggtttgta actttttcga tgatgttcgg tgatgtcgag ccgttccagg cctgcttgat
      541 gcgctttggt accatagccc atattatttt cccacgcata tccggggtgc gattcgctaa
      601 gcttggtcat tatgcgatcg cgtgtaacct tggcgaagat cgacgctgcg gcaatggaaa
      661 gtgagcgcga atcccctttg acaatggcct cagctggaca gaaaataagc ggtactttgt
      721 tgccatcgac caaggcaaat tcaggtggac tggaaagact ttcaaccgcg cgcgccatcg
      781 ccagaaaagt tgcctgcaaa atattaacag tatcaatctc ctcgacactg gcgataccga
      841 caccgcattc aacgctttgc tggagcgctt caaatagagc ataacgtttg ggcgcggtga
      901 gcttttttga atcttctagt ccggtcagca gcgcgccgct catattttct cgatcaagaa
      961 taactgccgc cgcgacaacc ggcccggccc aagagcctcg ccccgcttca tctatcccgg
     1021 cgatacggct gatgcccttt tcaaccaagc gattttcgta ttcaaagtcc ggcaaagttc
     1081 accccaaatc ccagccctcg gggaatatat gcctaccatc caagtcgaga ttcaattcaa
     1141 atgttctgat cacagccgca accggcaagt caccatagag atgcgggaac aacatatcat
     1201 tacgggaggg ttcccatttg agtgcgtcac cgagcgcagt tggatcaact tcgagtaata
     1261 ccaaccgatc ctgaccagcg cgatgcttgg ccacactttc gatcacctga gcaccacttg
     1321 aaaaatggat aaatccgtcg gcttgatctt gtgaggagcc gttatagctg ccgctagttt
     1381 gggccaatgc ccattcatcc gcccggcaga tgtagtagat cggccccgct ggcatttaag
     1441 ttaagccgac agtcgggttt tgagcgcctt cagatagcgc aaatccattt gctcgaactc
     1501 accttgttcc aaatcgtctt catattcttc gagctcggat ttggtagcat cagaaatttc
     1561 cagcccacga atggccgcga tcaggctcga agcttctgct ttttcttctg cgctgagtgg
     1621 atttaaatcg ctatcatcat cgtcgtcgtt agattgctca gcttcgcctt catcttcgtc
     1681 atcatcgcta tgatctgatt ctgtcgacgc atcaccttga gacatcagca aatcatccca
     1741 ggtgacaccg gcaactgtca tcttggcatt aatatcgcga gccgccgcta aaacgtcagc
     1801 ctcgtcttcg ctgttaagct tttccagcaa agcaataaaa tcgtctcttt ctaactttgt
     1861 tctcattgat gttctccaac gggtcataga gcatgacgac tcctgaaaaa caagactgaa
     1921 ttatttgacc ttgcgcctag aataaaccca tttgaccacc cagcgccagt ggtgcttcga
     1981 actgcgaaca attaagatca agtatgcgtt cgggaaggcc gagctttttt tgcgcaaggt
     2041 gaaaacgtcg ttgaattatc tcggcgtaag gtccctcccc ggtgaaccgt tgaccaaact
     2101 ccgaatcatt caattttcct gaacggcatt gccggatcag gctaagaaca tggcgggcgc
     2161 gatcaggata gtgcgcctca agccaatcag tgaacactag ttttaactca taaggcaagc
     2221 gtagcaacag ataagctgcc tgcacggcac cagcttcagc gcagactgct aatattttct
     2281 caatttccgg gtcgttgagc ccgggaatca tcggtgaaac caaaacaccg gtcggcacgc
     2341 cggcgtcgtt aagcgcctgc atggttttaa ggcgtcgctc cggcgttgcc gcgcgcggtt
     2401 ccatcttacg ggcgagatcg cgatccagtg tcgtcaccga aatcatgaca tgaaccagat
     2461 tacgctcggc cattgaggtt aagatatcaa ggtcgcgcaa aataccggct gacttggtaa
     2521 tgatcgaaaa cggatgattg aaagcgttca acacttcgag aatcgagcgg gtaatcatga
     2581 gctcccgctc agccggttga tagcaatccg tattgacgcc taaggccatc ggcgccggtg
     2641 tgtattttgg tttccgcagt tctttctcta acagcgcggc agcgtattct ttaaaaaata
     2701 ttctggtctc aaaatcaagt ccaggtgaca aatccagaaa tgcgtgcgac ggtcgtgcaa
     2761 agcaatagac acacccatgc tcacaaccac gatacggatt gatcgagcga tcaaatggaa
     2821 tatcgggtga ttgattgcgg gtaatgacac tgcgggctgc atccggtctg attttggttt
     2881 gcaacttatg cgccaaatcg ctttcattct cggcagccca ccaaccgtcg tcaaccgcaa
     2941 tgcgtgccgt ctgctcgaaa cggcccgccg gattaccgac agcaccccga cctttttgca
     3001 attgatctga taacatgtcc atagcgagct tataacacat agaaagttaa taggaacata
     3061 acaagaacat acatatttgt tatcacaatt gcaatggccc ctttacgaca agcccagtat
     3121 agtcccacca tgctgagtat tattatccca acattaaatg cagcagcggc tattgagcgg
     3181 actttaacgg cgcttgggac gcccgaaata gcgacacaga ttattgtcag cgatggcggc
     3241 tcaacggatg aaacacgatc aattgctgaa cggtatgggg cgacggttat taacgcgcca
     3301 aaaggccgcg gttcccaatt ggctgccggg gcggacaggg caacacatcc ctggttgtta
     3361 tttctccatg ccgatacgct attggacgcc gcgtggccgc agacattcat agcgtttgtt
     3421 gccagcccta tgacacctcc tcgcgccggt gtttttaaat ttaccttgga cgatccggcc
     3481 ccggcagccc gccggcttga aaaaattgtt gtgtggcgat gccgcttgtt gggcttgcct
     3541 tatggcgacc agggtttgtt gatctcgcgc cagcattatg atcagattgg cacctttaaa
     3601 ggcttacctc tatttgaaga tgttgagatt gtccggcgca tcggtcggca caatattgaa
     3661 tatcttgaac ttccagccat cacctctgcc gtccgttatc aaaaatccgg ttatgtcttg
     3721 cgtactttga ggaatgcaac ctgcctgtcg ctctattttg ccggactctc gccaaagcta
     3781 atcggacgcc tctatcaatg agcttaaccc agcatctcgt tattttt
//
LOCUS       DASCNL010000051         1929 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000145956, whole genome shotgun sequence.
ACCESSION   DASCNL010000051 DASCNL010000000
VERSION     DASCNL010000051.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000145956"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            234..1265
                     /gene="queA"
                     /locus_tag="QF359_00635"
     CDS             234..1265
                     /gene="queA"
                     /locus_tag="QF359_00635"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HJO85445.1"
                     /translation="MKVSDFDFDLPQELIAQHPLEPRDAARLLHIGENLSDLGVKDLP
                     GLLNPGDILVFNNTKVIPSRLTGKRGEATVEVTLHKQDSDNTWWAFARPAKRLRPGDE
                     LIFGVDFKCSVEKKRDGGEVLLSFEGGISALMAGLDHYGYMPLPPYIKRDKGGNVEDR
                     ADYQTLYAEREGAVAAPTAGLHFTGDLMAALDQNSIKKAFVTLHVGAGTFLLVKAEDT
                     DDHIMHAEWGEIDQATADAINQARAAGGKVVPVGSTSLRLLETAADAEGKLHPFTGET
                     DIFITPGYSFKITDKMVTNFHLPKSTLFMLIAALAGTERVKATYTHAIQENYRFFSYG
                     DACLIEKSL"
     gene            1262..>1929
                     /locus_tag="QF359_00640"
     CDS             1262..>1929
                     /locus_tag="QF359_00640"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HJO85446.1"
                     /translation="MTDFSYTVSATDGAARSGQIVTAHGVIDTPAFMPVGTAGTVKAM
                     TPESVAETGAQIVLGNTYHLMLRPGADRVERLGGLHKFMNWPGPILTDSGGFQVMSLS
                     KLCKMTEDGVTFQSHIDGKKFELTPESSIDIQRKLDADITMQLDECPAHTVDKKIINE
                     SMQLSLRWAERSKTAFDERPGYGVFGIVQGGVFDDLREQSAKGLIDMDFHGLAVGGLA
                     VGEP"
BASE COUNT          444 a          468 c          546 g          471 t
ORIGIN      
        1 tggctatagc cggtgaccct ttcaccatcg gtatttaacg cgatttcaat ggaactgccg
       61 cagagcgggc tgcgcagtaa aacctccgca tccggattct ccaatggttc cagcccaccg
      121 atattggcgg caaggcggag cacgtctcta ttataaatat cgtcgatcat ggtgtttgga
      181 atatagtcgc ctagaagttt gctcgccagt ccctaatcgg ctaaagcact caaatgaaag
      241 tttcggattt tgatttcgac ttgccccagg aattgatcgc gcaacatccc ctagagccac
      301 gggatgccgc acggttgttg catattggcg aaaatctcag cgatctcggc gtcaaagacc
      361 tgccaggcct gcttaatcca ggcgatatat tggtcttcaa taacaccaaa gtcatcccgt
      421 cgcgcctgac cggcaagcgc ggagaggcga ctgtcgaggt cacgctccac aagcaggata
      481 gcgacaatac ttggtgggct tttgcccggc cggccaagcg tctgcgtccg ggtgacgagt
      541 tgatcttcgg tgttgatttt aaatgtagtg tcgagaaaaa gcgtgatggc ggcgaagttt
      601 tactatcctt cgaaggcggt ataagtgcgc tgatggccgg gcttgatcat tatggctata
      661 tgccgctgcc gccttatatc aagcgcgaca aaggcggtaa tgtagaagac cgggctgatt
      721 accaaacgct ttatgccgag cgtgagggcg cggtcgctgc tcccactgcc gggctgcatt
      781 tcaccggaga cctgatggcg gcactcgatc aaaacagcat caaaaaggcc tttgtcacgc
      841 tacatgtcgg ggcggggacg tttctgctgg tgaaagccga ggacactgat gatcatatca
      901 tgcatgcgga atggggtgag attgatcaag cgacagccga cgcaattaac caagcccgcg
      961 ccgccggtgg taaagtagtc ccggtcggtt cgacatcttt gcgcctgttg gaaacagctg
     1021 cagatgccga ggggaagctt catcccttta ccggtgagac ggatatcttt attaccccag
     1081 gttatagctt taaaattacg gataagatgg tgacgaattt tcacttgccg aaatcgacct
     1141 tgtttatgtt gatcgctgcc cttgcgggaa ccgagcgggt taaggcaacc tatacccacg
     1201 ctattcaaga aaactaccgt ttcttttctt atggtgatgc gtgcctgata gaaaaatcgc
     1261 tatgacggat ttttcctata cggttagcgc cacagatggt gccgcgcgtt cgggccagat
     1321 tgtgacggct cacggggtga tcgatacgcc ggcctttatg ccggtgggga cagccggtac
     1381 ggtaaaggcc atgacaccgg agtcggttgc tgaaaccggc gcgcaaattg ttctcggtaa
     1441 tacctatcac ttgatgctgc ggccaggcgc ggacagggtg gagcgcttgg gtggacttca
     1501 taaattcatg aactggccgg ggccgatctt gaccgattca ggtggtttcc aggtgatgtc
     1561 gctttctaag ttgtgcaaga tgaccgaaga cggggtgacc tttcaatctc atattgacgg
     1621 taagaaattt gaactgaccc cggaaagctc gatagatatt cagcgcaaat tggatgccga
     1681 tattaccatg cagcttgatg aatgtccggc ccatacggtg gataaaaaaa tcatcaatga
     1741 atcgatgcag ctttctctgc gctgggcgga acgatcgaaa actgcgtttg atgaacgtcc
     1801 gggctatggc gtgtttggta ttgtccaagg tggcgttttt gatgatctcc gggagcaatc
     1861 cgccaaaggc ctgatcgata tggattttca tggtcttgcc gtcggcgggt tggcggttgg
     1921 tgagcccca
//
LOCUS       DASCNL010000052         4813 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000147009, whole genome shotgun sequence.
ACCESSION   DASCNL010000052 DASCNL010000000
VERSION     DASCNL010000052.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4813)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4813)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4813
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000147009"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            412..1830
                     /locus_tag="QF359_00645"
     CDS             412..1830
                     /locus_tag="QF359_00645"
                     /inference="COORDINATES: protein motif:HMM:NF014296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HJO85447.1"
                     /translation="MRVVRTWSVRHSRFIETVWQAFSLILDMLAPVLRHLPRHFLETP
                     IKPLEKLTKKFMFDCQMCGQCVLSLTGIACPMNCPKTLRNGPCGGVLADGGCEVSPEM
                     TCVWLEAWDGSSQMRNGTTIFEIQHPVSHLTHARSTWAASLQGDHSQPAWPEISVGST
                     VKTTDEAPARASNLQRVLNSGAFTVTTEFNAPDTAAAEDIIEAVQPLTDICDGVNVTD
                     NAGANVHISSLSTCALMAREGFEPVMQMTCRDRNRLAIQSDVLGAATLGVTNITCMSG
                     DAITSGDHPDGKPVFDLDAASLLQTIRHLRDEGKFLTGRELKSPPYIYMGATANPSAS
                     FLDVEISRVAKKVHAGAQYLQTQYCFDMTALKNFITRFRDEGLDEWAHLLVGVGPLRS
                     AKSGRWMRDHIPGVQIPDNIIKRIERADDERAEGQKFAAEFIKELKEMAAVSGVHIMA
                     IGQPLRVAQIVEMAGIGPKYRC"
     gene            1967..2623
                     /locus_tag="QF359_00650"
     CDS             1967..2623
                     /locus_tag="QF359_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617913.1"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HJO85448.1"
                     /translation="MSNEKHEKLVNLIADMEEDEALALTQELIDEGAEPTAILDICRA
                     AMDIVGQRFEDNEYFVPELILAGEVLDQMSAMVKPLIADTTDEEDKVDSGMVLIGTVH
                     GDLHDIGKNIVTFMLDVNGYNVIDLGVDVSPQAFIDAIKEKSPEIVGLSGFLTLAFDS
                     MKETVEAISEAGLREEVKIMIGGGQVDEQILNYTGADSFGLNAMSAVNQCKEWIGEAA
                     "
     gene            2623..3879
                     /locus_tag="QF359_00655"
     CDS             2623..3879
                     /locus_tag="QF359_00655"
                     /inference="COORDINATES: protein motif:HMM:NF013381.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HJO85449.1"
                     /translation="MTPKDSDRDPKELYQERVERIADTVALKETDRVPYIYLTRFWNA
                     KLADMTSKDTMYDVEKSISSNRKAIELLQPDAFGAANYAYGQALEKLDYHPLEWPGGG
                     AADDVCFQYIDKELMVPDEYDEYLFDPTAFYLQKYLPRIATGFEGLKHFPNFPTLSEW
                     NIIYNLRAFANPELQESFKTLMEVGEMVDHSMTKMTEFIKAMMEAGYPMAIGGFCKAP
                     YDHIVDFLRGSKGGMLDMFRHKDKLLETIDKARLLLNTNVVEGAKLVGCPYVFIPLHW
                     GLDGFMSPDQFNEFYWPSLRQTIHDLIDAEMTPVILWEGDCTTRLEFIGDIPPGKAIY
                     WFERTDLHTTKDVLGDVVCLRGNVPPSLLNTGTVDEVNAYCKDLIEYVGKGGGFILDG
                     AASITDEAPIENVVAMAESVRKYANK"
     gene            3899..>4813
                     /locus_tag="QF359_00660"
     CDS             3899..>4813
                     /locus_tag="QF359_00660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85450.1"
                     /translation="MLDKTGAELYAEREQRINDAMALKETDRVPLSMFSHFWPATLAG
                     ITFEQAMYDYDAFHDAMRQTLELMQPDMYALNQTYICVGPTLELMNFKQLEWPGHGTE
                     PNVSFQFLDREYMKRDEYDAYLADTTDFFLRKYMPRIAGAFEPFAKLPYLPAQYYFKM
                     IRVPTAFAGDEMIEGLEKILAAGKEMRKMMGGALKFAKDMAERGFVQSIGGSAAAPFD
                     NFADYLRGSKGAMLDLFRNKDKLLECMDRVADCIIKDTIIASKNNPSRQIFIPLHWGL
                     DNFMSPEQFELFFWPPLRKVLMGFIEADL"
BASE COUNT         1229 a         1083 c         1231 g         1270 t
ORIGIN      
        1 ctagataggt tgtcatattg ctgatttttt tgctgattct gttataagaa tcaaagcaat
       61 atacacatca gaacggacgc gctccgtgtc acccagcggg tgaaagcaga cattcccctt
      121 tgcgggtcga ttttgaccac tgtttaaagt tggaatttca cggttccaag atcaccactg
      181 atggtcaaat taacaaaccg ggattgttgg atggatgcag agcgaaattc cttccatctg
      241 tggtcagacc gacctacaat tggcaagcgc ttggctgcac cgatggtatt cgtattgacg
      301 tagatcaagt acgaaattac tggtacgaga aaaactactt tatttatagg tctataaatg
      361 ttttataagt ttataaatat attacagatc aataaatgga gtatcgttta ggtgagagtg
      421 gtaaggacat ggtcggtacg gcactcccgt tttattgaaa cggtgtggca ggcgttttcg
      481 cttatcctcg atatgctggc gccggtgtta cgtcatctac cccgccattt tctcgaaact
      541 ccgatcaagc cgctcgaaaa actcaccaaa aaatttatgt tcgattgcca aatgtgtggc
      601 caatgtgtgc tcagcctgac cggtatagcc tgcccgatga attgtccgaa aacgctgcgt
      661 aatggtccgt gcggtggtgt cttggctgat ggcggttgtg aggtatcacc ggagatgacc
      721 tgcgtttggc tggaggcatg ggatgggtcc agtcaaatga gaaacggcac aaccattttt
      781 gaaatccagc acccggtctc acatttgacc catgcccgct cgacctgggc ggcgagcttg
      841 caaggcgatc attcccaacc ggcatggccg gagatttccg tcggcagcac ggtcaaaacc
      901 accgacgaag cgcctgcacg tgccagcaac ttgcagcggg ttctgaattc aggcgccttt
      961 acggtaacca ctgagttcaa tgcgccggat accgcggcgg ccgaagatat tattgaggca
     1021 gtgcagcctc ttacagatat ctgtgacggc gttaacgtca ccgataatgc cggcgccaat
     1081 gtccatatct ccagcctgag tacttgcgct ttaatggcgc gggagggttt tgagccagtc
     1141 atgcaaatga cctgtcgcga ccgcaatcgt ttggcaatcc aatcggacgt tttgggcgcc
     1201 gcgacacttg gtgtcaccaa tatcacctgc atgtcgggcg atgccattac cagcggcgat
     1261 catccggacg gtaagccggt ctttgactta gatgccgcat cgctgctaca gaccatccgg
     1321 catttacgcg atgagggtaa attcctgacc ggacgtgaac ttaaatctcc gccttacatt
     1381 tatatgggag caaccgccaa tccatcggcg tcatttctcg atgttgaaat aagccgggtt
     1441 gctaaaaaag ttcatgccgg tgcgcaatat ctacaaactc aatattgttt tgatatgact
     1501 gctttaaaga attttatcac ccgatttaga gatgaggggc ttgatgaatg ggcgcatttg
     1561 ctggtcggtg ttggtccgtt gcgctcagct aaaagcggtc gctggatgcg ggatcatatt
     1621 cccggtgttc aaattccgga caatataatt aaacgtattg aacgggcgga tgatgagcgg
     1681 gcagaagggc aaaaatttgc tgctgagttt attaaggaat taaaagaaat ggccgccgtc
     1741 tctggcgttc atattatggc gattggccag cccttgcggg ttgctcagat tgtcgagatg
     1801 gctggtattg gacccaaata taggtgttaa tgcaaatggt gtatcaactg gacgccgtta
     1861 gaataagttc agatttttgt tgagagggat ttagccggtt tagtcgcagg cggtctccta
     1921 ttgattttaa taattagcaa aagcgtagac tacaggagtc gcaattatga gtaatgaaaa
     1981 acatgagaag ctggtcaatc taatcgccga tatggaagag gacgaagccc ttgctcttac
     2041 ccaggaactg atcgacgaag gcgctgagcc caccgctatt ctcgatattt gccgcgctgc
     2101 tatggatatt gtcggccaac gttttgaaga taatgaatat ttcgtcccgg aactcattct
     2161 agccggtgaa gtgctcgacc aaatgtcagc gatggtaaaa ccgttgatcg ccgacaccac
     2221 agacgaagag gacaaagttg atagcggcat ggttctgatc ggcacggtgc atggtgattt
     2281 gcatgatatc ggtaaaaata ttgtcacctt tatgctcgac gttaacggct acaatgtcat
     2341 tgatctgggc gtcgatgttt cgccccaggc ctttattgac gcaattaagg aaaaatcacc
     2401 tgaaattgtt ggtttaagcg ggtttttaac actcgccttc gattcgatga aagaaaccgt
     2461 tgaagccatt tccgaggcgg gtttgcgcga agaagttaag atcatgattg gtggtggcca
     2521 ggttgacgag caaatcctta attatacggg agctgattct tttggcctca atgccatgag
     2581 cgccgtcaac caatgcaaag agtggatcgg agaggcagca taatgacacc aaaggattcc
     2641 gaccgagacc ccaaggaact ttatcaggaa cgcgttgagc ggatcgctga taccgtagcc
     2701 ctaaaggaaa cggaccgggt tccatatata tacttgacgc gtttttggaa tgctaagctt
     2761 gctgatatga ccagcaagga caccatgtac gatgtcgaaa aaagcatttc ctccaaccgg
     2821 aaagcgattg agttgctgca acccgatgcc tttggggcag cgaattacgc ttatggtcag
     2881 gctttggaaa agctcgacta tcatccgctc gaatggccgg gtggcggtgc tgcggatgat
     2941 gtttgttttc aatatattga taaagagctt atggtcccgg atgaatatga tgagtatttg
     3001 ttcgatccaa cggccttcta cttacaaaaa tacttgccac gtatcgctac cggatttgaa
     3061 ggtctcaagc atttcccgaa tttcccgact ttgtctgaat ggaacatcat ctacaatctt
     3121 cgtgccttcg ccaaccctga acttcaagag tcttttaaga cattgatgga agttggcgag
     3181 atggtagacc attccatgac caagatgacc gagttcatca aggcgatgat ggaagccggt
     3241 tacccgatgg cgattggcgg tttctgtaaa gcaccctacg accacatcgt cgatttcctg
     3301 cgcggttcca aaggcggcat gctcgatatg ttccgtcaca aagacaagct gttggaaact
     3361 attgataaag cgcggttgct gctgaacacc aatgtcgttg aaggggccaa gctggttggc
     3421 tgtccctatg tctttattcc tcttcattgg gggctcgatg gctttatgtc accggaccag
     3481 tttaatgaat tctactggcc gagcttgcgc caaactatcc atgatctaat tgatgcagaa
     3541 atgacaccgg ttattttgtg ggaaggcgat tgcactacga gacttgagtt tattggtgac
     3601 attccaccag gcaaagccat ctactggttt gagcggaccg acttacatac caccaaagac
     3661 gtgcttggtg atgttgtttg tttgcggggc aatgtcccac cgtcacttct taatacggga
     3721 acggtggatg aggtcaatgc ttattgcaaa gacctcatcg aatatgtcgg caaaggtggt
     3781 ggcttcattc ttgatggcgc cgctagcatc accgatgaag caccgattga aaatgtcgtt
     3841 gcaatggcag aatctgtgcg caaatacgct aataaataat ttggagggta gtagttctat
     3901 gttggataaa acaggcgccg aactttacgc cgaacgagaa caacgcatta atgatgcgat
     3961 ggccttgaag gaaaccgacc gggttccgct ctctatgttt tctcacttct ggccggctac
     4021 attggcgggc attacgttcg agcaagccat gtatgactat gatgcttttc atgacgccat
     4081 gcgccagaca ctggaactga tgcagcccga tatgtacgct ttgaaccaga cctatatatg
     4141 cgtcgggccg actcttgagt taatgaattt taaacagctc gaatggccgg gtcacggcac
     4201 tgaacccaac gtctcatttc agtttctcga ccgtgaatat atgaagcgag atgagtatga
     4261 cgcctattta gcagatacaa cggatttttt cctgcgcaaa tacatgcccc gcattgctgg
     4321 tgcctttgag ccgtttgcta aactgccata tctgccggcc cagtattatt tcaagatgat
     4381 tcgggtgccg acagcttttg ccggtgatga gatgattgaa gggctggaaa aaattctcgc
     4441 tgccggcaag gaaatgcgga aaatgatggg cggcgctctc aaatttgcca aagatatggc
     4501 tgaacgagga tttgtgcaaa gcatcggcgg atcagccgcc gcgccgtttg ataattttgc
     4561 cgattatctc cggggctcca aaggcgctat gctagatttg ttccgcaaca aagataaact
     4621 gctggaatgt atggaccggg ttgctgattg cattatcaaa gacaccatca ttgccagcaa
     4681 aaacaatcca agccggcaaa tatttattcc gttgcattgg gggcttgata atttcatgtc
     4741 gccggagcaa ttcgagctgt ttttttggcc accattaaga aaagttctga tgggcttcat
     4801 cgaagctgat ctt
//
LOCUS       DASCNL010000053         2457 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000148428, whole genome shotgun sequence.
ACCESSION   DASCNL010000053 DASCNL010000000
VERSION     DASCNL010000053.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000148428"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="QF359_00665"
     CDS             complement(<1..195)
                     /locus_tag="QF359_00665"
                     /inference="COORDINATES: protein motif:HMM:NF024252.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HJO85451.1"
                     /translation="MEHWSKRLWRALSWKGWSQRDLARRAEIDEQKVFKYLQGKVDQP
                     RGDTMLRLADCLGVTESWLRF"
     gene            complement(811..1218)
                     /locus_tag="QF359_00670"
     CDS             complement(811..1218)
                     /locus_tag="QF359_00670"
                     /inference="COORDINATES: protein motif:HMM:NF014084.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF120 domain-containing protein"
                     /protein_id="HJO85452.1"
                     /translation="MNIMKLTGKVVIGEQQATFFTQLDWVMRQCSEKLGFEPFPGTLN
                     LEVITEDLKLVHELKYKKGVELQPTDLQSCAATVLPVQIEGHDCAVVVPDEEVNIHKE
                     NIVEIMSGESLRSTLNIKDGDPVTITFRKPDEE"
     gene            complement(1215..1430)
                     /locus_tag="QF359_00675"
     CDS             complement(1215..1430)
                     /locus_tag="QF359_00675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85453.1"
                     /translation="MDAPPGASCQVWKLILAYLDARRAQVTKKPRLELIIKRKATGMN
                     EAIWFGGLAGGYEVEVVEFSEDMLRIE"
     gene            complement(1449..1670)
                     /locus_tag="QF359_00680"
     CDS             complement(1449..1670)
                     /locus_tag="QF359_00680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HJO85454.1"
                     /translation="MAIEKIENCNGCQLCVLICPTDVIRMDTKTNTAQIVYPDDCQIC
                     YLCDLYCRENAITITQQKAGDLTLGWGAT"
     gene            complement(1679..>2457)
                     /locus_tag="QF359_00685"
     CDS             complement(1679..>2457)
                     /locus_tag="QF359_00685"
                     /inference="COORDINATES: protein motif:HMM:NF014907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO85455.1"
                     /translation="MQFKKRKMIGGSSAGLAVHKAEGIFSQNNTCASNVPGLYAAGDG
                     LGSMLCGTLYAGIGFSFCGSSVQGACAGEEASEFAATAELVPISKLKTKSIHETMFEP
                     LERKTVITPAWVTQIMQNAVIPYYVLYVKEQSRLEAALTNIEFMRDHLAPKMIASNPH
                     ELRSVHETINMLLNAEMKLRASLFRTESRGTHYREDFPARNDDDWLAWIKIKSGAEGK
                     KLIKHPIPDEWRPDERVPYEERYPARFPGELDYRIQQAAE"
BASE COUNT          622 a          637 c          515 g          683 t
ORIGIN      
        1 aaaccgtaac caactttcgg tgacacccaa acaatcagcc agacgcagca tcgtgtcccc
       61 tcggggctga tcgactttgc cttgtaaata tttaaagact ttttgttcgt cgatttcagc
      121 acgacgggcg agatcacgct gagaccaacc tttccaactc aaggctctcc acaagcgctt
      181 cgaccaatgt tccattctta ttacctttaa attctagctg gtcattgaga ctgtattttt
      241 cttttaatta agcatatttt atatgagtta aaaggtgtaa ttatcaatcg atcatacata
      301 ggagattata agtgaccgct tatccgcgca aaattggcat agcaaatgat cccaacacgg
      361 tagaacttga tgcagaaatt attgttgacg ctagatttga gataaatcaa ccaattcata
      421 tctgctagat cgggtcccaa ttaaaagcac gcgcttgatg cgccctgacc caaacgggtt
      481 taccgaccct cggcttgacc gattttgcat tacatcaagt tcactctgcc aaactctcta
      541 actccttata atccatatag tcctatatcg cgggaacagt tatggacttc tgatacgttc
      601 taccttgttt catcaacgcc cagataatac gggtgttctt attggccaac gccacggcgg
      661 caactttggc cggttggcag gcgatcatat catcaagcca gggcatattt gatgtgccac
      721 gccgtttagc ctgacggatt attgatatgg ccctaacaat cagttgccag cgcagatact
      781 ggtctccctg tttagatatt ttaccgagac ctattcctca tctggttttc taaacgtaat
      841 cgtaaccgga tcaccgtctt taatattgag ggtgcttctc aaactttcac ctgacattat
      901 ttcgactata ttttctttat gaatattcac ttcctcatca ggaactacaa cggcgcaatc
      961 atgtccttca atttggacag gtaataccgt ggcagcgcag gactgcagat ccgtgggctg
     1021 cagttccact ccttttttat atttaagttc atgtaccaat tttaaatctt cggtgataac
     1081 ctccaggttt aaagttcctg gaaacggctc gaacccaagt ttttcagaac attgcctcat
     1141 cacccagtcc aattgagtga agaatgtggc ttgctgttca ccgataacaa ccttgcccgt
     1201 cagtttcata atattcattc tatcctgagc atatcctcgc taaattcaac cacttcgact
     1261 tcatatccac cagccaaacc accgaaccag atcgcctcgt tcatgccggt cgccttgcgt
     1321 ttgatgatga gttccagccg tggttttttt gtgacttgcg ctctccgggc atccaagtaa
     1381 gctaaaatca atttccagac ctggcaagag gcacccggcg gtgcgtccac gtaagtttcg
     1441 gtaaaagatt aagttgcccc ccaaccaaga gtgagatccc cggctttttg ctgggtaata
     1501 gtgatcgcat tttcccgaca atagagatca cacaaataac aaatctgaca gtcatctgga
     1561 tagacaatct gcgcggtgtt ggttttggtg tccatgcgaa tgacatcggt cggacagatg
     1621 agcacgcaaa gttggcagcc attgcagttt tctatttttt caatcgccat gtctcgccct
     1681 actccgcagc ctgttggata cgataatcaa gttcgccggg aaagcgtgct ggatagcgtt
     1741 cttcatacgg cactctctca tcaggccgcc actcatccgg gatcgggtgc ttgatgagtt
     1801 tcttgccttc cgcacctgac ttaatcttaa tccaggccag ccagtcatca tcgttgcgcg
     1861 ccggaaagtc ttcccggtaa tgggtaccac ggctttcggt ccgaaacagc gaggcgcgta
     1921 atttcatctc ggcattgagc agcatgttga tggtttcatg aaccgaccgc aactcatgcg
     1981 gattactggc aatcattttc ggcgccagat gatcgcgcat aaattcgata ttggtcagcg
     2041 ctgcttccag ccggctctgc tctttgacat acagtacgta atacggaatg accgcgttct
     2101 gcatgatctg cgtcacccaa gcaggcgtga taacggtctt gcgttctaac ggctcaaaca
     2161 tggtttcgtg aatcgacttg gtttttaatt tagaaatcgg caccagttca gctgtagcag
     2221 caaactcgct cgcctcttca ccggcgcaag ccccttgcac agaagaacca cagaaagaaa
     2281 atccaatccc ggcatagagc gtaccgcaaa gcatggagcc gagaccatca cccgctgcat
     2341 atagtccagg cacatttgaa gcgcaggtat tattttgtga gaaaatgcct tcggctttat
     2401 gaaccgccag acccgccgaa gagccaccga tcattttgcg tttcttaaat tgcatat
//
LOCUS       DASCNL010000054         1074 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000153200, whole genome shotgun sequence.
ACCESSION   DASCNL010000054 DASCNL010000000
VERSION     DASCNL010000054.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000153200"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="QF359_00690"
     CDS             <1..390
                     /locus_tag="QF359_00690"
                     /inference="COORDINATES: protein motif:HMM:NF013286.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HJO85456.1"
                     /translation="FIGPTSALAGGMTNIFGHYIPDVRAVKDYRDAIPKPGLDTDEGR
                     AIKQLLDERINPSIASHGGHISLIDVKDNTVYVRLEGGCQGCGMADVTLKQGVEGEIK
                     NAVPSIVAVLDATDHAGGTNPYYAPSK"
     gene            417..>1074
                     /locus_tag="QF359_00695"
     CDS             417..>1074
                     /locus_tag="QF359_00695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CUAEP/CCAEP-tail radical SAM protein"
                     /protein_id="HJO85457.1"
                     /translation="MQVLLLSTYDLGHQPFSLASPAAKLRATGANVTCNDLAVAVLNE
                     DAVRDAGLIGLYLPMHTATRLSIELLPRLKEINPDAHIIFYGLYAPLNADYLRSIGGD
                     SFIGGEFEDTLVGIYQNLVKDETTPTTPLISTAKQEFNRPWREDLPKLDRYAHLDVGD
                     GTTKIVGYTEASRGCKHTCCHCPVVPVYQGYFRIVPVDIVLADIRQQIAKGAEHISFG
                     D"
BASE COUNT          252 a          274 c          268 g          280 t
ORIGIN      
        1 tttattggtc cgacttcggc tcttgccggc ggtatgacca atatcttcgg tcactacatc
       61 ccggacgttc gcgccgtcaa agattatcgt gatgcgatcc cgaaacccgg ccttgatact
      121 gatgaaggcc gcgcaattaa gcagttattg gatgaacgga ttaatccatc gattgccagt
      181 catggtggtc atatttctct gatcgatgtc aaagacaata cggtttacgt tcgtctcgaa
      241 ggcggctgcc aaggctgcgg catggccgac gtcactttga aacaaggcgt cgagggcgaa
      301 attaaaaatg ctgtacctag tatcgttgct gtgctggatg caacagatca cgccggtggc
      361 accaacccct actatgcacc gagcaagtaa tagaaccgcc ctggcgggat aggctcgtgc
      421 aagttctttt gctctcaact tacgatctcg gtcatcagcc gtttagcctc gcctcacccg
      481 cagcaaaact gcgcgctacc ggtgcaaatg ttacctgtaa cgacctcgcc gttgctgtgt
      541 taaatgagga tgctgtcaga gatgccggct tgatcgggct ctatctgcca atgcatactg
      601 caacgcggct ttcgattgag ctgttgcccc ggctgaagga aattaatcca gacgcccata
      661 ttatttttta tgggctctat gcgccgctca atgcggatta tctaagatcc atcggtggcg
      721 atagttttat tggcggtgag tttgaagata cattggtggg tatttatcaa aatttggtca
      781 aggatgagac aactccaacc actccgctaa tctcaaccgc taagcaggaa ttcaaccggc
      841 cttggcgtga ggatttacca aaacttgatc gctatgccca tttagatgtt ggtgatggca
      901 caaccaaaat tgtcggctac accgaggcca gccgcggttg caaacacacc tgctgtcatt
      961 gtccggtcgt gccagtctat cagggttact ttcgcattgt tccggtggat atcgtgctcg
     1021 ccgatatccg ccaacaaatt gccaaaggtg ctgaacatat cagtttcggt gatc
//
LOCUS       DASCNL010000055         1737 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000154335, whole genome shotgun sequence.
ACCESSION   DASCNL010000055 DASCNL010000000
VERSION     DASCNL010000055.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000154335"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="QF359_00700"
     CDS             complement(<1..288)
                     /locus_tag="QF359_00700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85458.1"
                     /translation="MNSIKKINKLGKISVAAVAALIGLVAEASAQDNINIGVLRFTSH
                     SAAFIAYEKGYFKEAGLSAKLVPFQAAAPMAVAIASGDIDYGVTAISGALVN"
     gene            825..>1737
                     /locus_tag="QF359_00705"
     CDS             825..>1737
                     /locus_tag="QF359_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HJO85459.1"
                     /translation="MRSLAADAPKNKGPRNDLRTLKTLMPYLWPKNALEMRTRVIIAV
                     LFLSLAKGINVGVPVLYKMAVDAISDNAASIVIVPVGILVAYGLARVMALAFGEFRDA
                     IFAKVAQRAIREAGLKTFRHLHKLALRFHLDRQTGGLSRAVERGTKGIDFLLNFMLFN
                     VLPTLLEILLVCAIMWGLFNFWFALVTFITVSTYIYWTVAVTDWRLKYRRTMNKMDGE
                     ANTKAIDSLLNYETVKYFGNEEHESRRFDQALRSYETAAVKSKVSLSLLNVGQGAVIS
                     AGMTILMIMAGFGVQDGTMTLGDFVLVN"
BASE COUNT          465 a          365 c          396 g          511 t
ORIGIN      
        1 atttactaat gctccgctga ttgctgtaac accgtaatca atgtctccag atgcgatagc
       61 gacagccata ggtgcagcgg cttgaaatgg gacgagcttt gctgacaagc cggcttcttt
      121 gaaataacct ttttcatagg ctatgaaggc tgccgaatgg gaagtaaaac gtagaacacc
      181 aatattaata ttatcttgtg cagatgcttc cgcaaccaat ccaattaacg cggcaaccgc
      241 ggctacagag attttaccta acttatttat tttcttgatg gaattcactt tttcctcctt
      301 tactctggtt tctctcactt atatgtattt ttttacatac ttccaaattc aattagtgtg
      361 aagagtatct actctcgcgg atgagaacaa ggtctttgcc gtgacgcgaa tagatacagt
      421 ccaatctggg ttttatgtac gaaaacggat acggtgtcct tcaggattat atccgtgctc
      481 atatgtggta caatattgcc gcatcatctg ggaataaaat ggcatctaat aacagagaca
      541 ttgttgcgga acgaatgtct cctgtccaac tggaaaccac acagaaactc gcccgtgaat
      601 gtgtccgtaa gaaatacaaa gggcgttgag agaggtgccc gggaactatt gatttgctat
      661 aacccccgca gattcaaact agattcaaaa taaaattaag ttattgaaat taaatagttt
      721 ttctggatat ttttattgag tgggagtaaa aagttaggat ataatttcca ttaacataat
      781 gatatataac actttacgat tcaatttgat ttattaggat ttatatgcgc tctctagccg
      841 ccgatgcacc gaagaataaa ggtccgcgca acgatctaag aactctaaaa acactgatgc
      901 cgtatctgtg gccaaaaaat gctctggaaa tgcggacgag agtgattatt gccgtgctgt
      961 ttctaagttt ggccaagggc atcaatgtcg gcgtaccggt gctgtataaa atggccgtcg
     1021 atgcgatctc tgacaatgct gcttcgattg tgattgttcc ggttggaatt ctggtcgcct
     1081 acggcttggc acgggtgatg gctttagcct ttggtgaatt tcgcgacgct attttcgcca
     1141 aagtggcgca acgcgccatt cgtgaagccg gcttaaaaac ttttcgtcac ctgcataaat
     1201 tggctctaag gtttcacttg gatcgtcaaa ccggcggcct gtcccgagct gttgaacgcg
     1261 gcaccaaagg catcgatttt ctgctcaatt tcatgttgtt caatgtgctg ccgaccttgc
     1321 ttgagatttt gctagtctgc gcaattatgt gggggctatt taatttctgg tttgcgctgg
     1381 ttacatttat caccgtcagc acttatattt attggacggt agcggttacc gattggcgtc
     1441 tcaagtaccg ccgcaccatg aataaaatgg atggtgaagc caataccaaa gccattgatt
     1501 ccctactcaa ctacgagacc gtcaaatatt tcggcaacga ggaacatgaa tcgaggcgct
     1561 ttgatcaagc gctcaggtca tacgaaacag ctgcggtaaa aagtaaagtt tccctatcgt
     1621 tgctcaatgt cggacaggga gccgtaattt cagccggtat gacaatcctg atgattatgg
     1681 cgggttttgg tgtgcaggac ggcactatga ctttgggcga ttttgtcctt gtgaata
//
LOCUS       DASCNL010000056         3501 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000154523, whole genome shotgun sequence.
ACCESSION   DASCNL010000056 DASCNL010000000
VERSION     DASCNL010000056.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3501)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3501)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3501
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000154523"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..694)
                     /locus_tag="QF359_00710"
     CDS             complement(<1..694)
                     /locus_tag="QF359_00710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85460.1"
                     /translation="MNEDVFSGWSGRILLAILLIVLLAFPWLAGEQGRFYTVLLMTVF
                     IFATLGHAWNLLAGYSGLLSFGLQVYVGLGGFTIGMLSFYGHVNVWLAMPIAAIVSVA
                     FAWLLAIPVTERFTGKRAAGPMVIAVILWILYEILISYEPSFDIFRGHYTRRVSILLL
                     IFLGALPLLKLQGAYFAVATWLIAAAVSSVFNEWKVTGAGGGLSIVSNTSIMARYYTG
                     LVLIVLSTFAVWY"
     gene            complement(691..1623)
                     /locus_tag="QF359_00715"
     CDS             complement(691..1623)
                     /locus_tag="QF359_00715"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO85461.1"
                     /translation="MTAEAFNEELYWSVIDILNGLLTGTIIGGYYAMISIGLAMTFGV
                     MRLVNLAHGDFIIVGAYLAVVLLNFLPISPFFTLTIVIPIMFCLGYVLQRVLLNHVSV
                     QAMERKGLSANYGLMAPILVTFGLGIFISHVLLGIFESDARQLKNSLAFSAIRLSEDL
                     NISLLRFIFFGLGIVILILLHLYLTRTHAGRAIRAASDDAEVSPLMGINTAHVYGLAL
                     GISMAIAGAAGVMIGMIRTFQPFDGPQFLLIAFGTVIIGGLGSIVGSLVGGILLGITQ
                     VLAGTYFGPSAQLVGGYMLILFVLAFKPQGLFSK"
     gene            complement(1620..2420)
                     /locus_tag="QF359_00720"
     CDS             complement(1620..2420)
                     /locus_tag="QF359_00720"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO85462.1"
                     /translation="MSISEHKRGFFAEEGRGGKRPLLTVSELSAYYGELRALFDVEFQ
                     VMPGEVLAIIGANGAGKSTLLKSMVGMMNRGKTAHTTGSIDMRGRRLDQLTTEKIVDA
                     GVTMVPEGRRLFPRLTVEENLLTGAYLPRCREASEDKLVEMLDMFPRFAERRTQIVSQ
                     MSGGEQQMVAVARALMSDPQVVLFDELSLGLAPAIVDDIYEKVQQINQAGVTCIVIEQ
                     DMKRALRVSNHVLVMLEGAIVLEGDPKDLNEDQVSSAYFGSEIGRASA"
     gene            complement(2401..3120)
                     /locus_tag="QF359_00725"
     CDS             complement(2401..3120)
                     /locus_tag="QF359_00725"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO85463.1"
                     /translation="MADTILSVEGLSKSFGAIRVAENISFSVNEGEILGIIGPNGAGK
                     TTIFALLAGNLPMDAGQIVFRGKDISILLAFERARLGMSRIYQVPKPFSHMTVYDNLK
                     VAAMFGGGLEEVECEGWIGQVLDLTGMTAARNTLAGRLPLLLRKRHELARSLATRPSL
                     LLIDEVAAGLTDMEVDEFIALIKEIQLSGITVVWIEHVMKTMMTATDRLMALAGGKVI
                     AMGTPQEVMATDEVRRVYLGA"
     gene            complement(3120..>3501)
                     /locus_tag="QF359_00730"
     CDS             complement(3120..>3501)
                     /locus_tag="QF359_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85464.1"
                     /translation="IKGGISISGLFDIAPLQHSFMQKELRLDPAIIERNSPQYKVHSV
                     STPLLITYGGDETPEFSRQSEDFSKAWAAKGNKVRRVSLPGKNHFNAISGFGDSQSPL
                     CQAIFKLMNFMPRRASAFQSRRHK"
BASE COUNT         1051 a          941 c          761 g          748 t
ORIGIN      
        1 aataccaaac ggcaaaggta gatagaacaa tcaagaccaa gcccgtataa taacgcgcca
       61 tgatggatgt attagagaca atgctcagcc cgccgccagc gcctgtcact ttccattcgt
      121 taaacaccga tgaaacagcc gccgcaatca accaggttgc gaccgcaaaa taagcgcctt
      181 gcagtttcaa cagaggtagc gcacctaaga atatcaaaag taaaatcgaa acccggcggg
      241 tgtaatggcc gcggaaaatg tcaaagctcg gctcatacga gatgagaatt tcatacaaaa
      301 tccaaagaat gactgcgatc accattggcc ccgccgcccg ctttccggta aagcgctctg
      361 tcaccggaat tgccaaaagc caggcaaagg cgaccgaaac aatcgcagca attggcatcg
      421 ccagccaaac gttgacatgg ccatagaaac tcaacatgcc tattgtaaag cctccaaggc
      481 cgacataaac ctgcaagcca aatgacagca gccctgaata ccccgccaat aaattccagg
      541 catgtcccag tgttgcaaag ataaacaccg tcattaatag cacagtgtaa aaccgcccct
      601 gctcaccggc cagccacgga aaggcgagca gaacaatgag taagattgcc agtaaaatcc
      661 gtccgctcca gccagagaac acatcttcat tcatttggaa aacagcccct gaggtttaaa
      721 cgcgagaaca aacagtatca acatgtagcc accaaccaat tgcgccgacg gaccaaaata
      781 ggtgcctgcc aacacttgcg ttattccgag taaaataccg ccgacaaggc tgccaacgat
      841 ggagccgagc ccaccgataa tgaccgtacc aaatgcaatc agcaaaaatt gcggcccgtc
      901 gaaaggttga aaagttctga tcataccgat catcacgccg gcagcgcctg caatcgccat
      961 cgaaataccg agagccagcc cataaacatg ggccgtgtta atgcccatca acggtgatac
     1021 ttccgcatca tcggaggccg ctctaatcgc gcgccccgca tgagtgcgcg tgagatagag
     1081 atgaagcaga atcaagatga caataccgag gccaaaaaag ataaaacgca gcagagaaat
     1141 attgagatct tcgctcaatc gaatagcaga aaaggcgagc gagtttttaa gctggcgcgc
     1201 atctgattca aaaataccga gcaatacatg ggagataaaa ataccaagcc caaaggtgac
     1261 taagatcggc gccataagcc cataattcgc acttagtcct ttgcgctcca ttgcctgaac
     1321 cgaaacatga ttaagtaata cacgttgtaa aacatagccg agacaaaaca taattgggat
     1381 cacgatggtg agcgtaaaga acggcgatat tggtaaaaaa ttaagtagca cgaccgccaa
     1441 ataagcgccc acgataatga aatctccatg cgccagattg accaaccgca tgacaccaaa
     1501 ggtcatcgcg aggccaatac tgatcatcgc gtaatagcca ccaataatgg taccagtaag
     1561 caaaccattc aaaatatcga tgactgacca ataaagttct tcgttaaagg cttccgcagt
     1621 catgcactgg ccctcccaat ttctgatccg aaataggcag aagatacttg gtcctcgttc
     1681 aagtctttag gatcgccctc taacacaatc gcgccttcca acattaccag cacatggttt
     1741 gaaactctga gagctcgctt catatcttgc tcgataacaa tgcaagtgac gccggcttga
     1801 ttgatctgct gaaccttttc ataaatatca tcgacaatcg cgggggccag accaagggat
     1861 aattcgtcaa acaacacaac ttgagggtca gacatcaaag ccctggcaac ggcgaccatt
     1921 tgctgctcac cgcccgacat ttggctgaca atttgagttc ggcgctcggc aaagcggggg
     1981 aacatatcta acatttcaac caacttatct tcactggcct cacggcagcg cggcaaatag
     2041 gcgccggtta acagattctc ttcaacggtt agccgtggaa acaaacggcg cccttccggc
     2101 accattgtta cacccgcatc aacaattttt tctgtcgtaa gctgatccaa tcggcggccc
     2161 cgcatgtcga tcgagccggt tgtgtgggca gttttgccgc ggttcatcat gccgaccatt
     2221 gatttcagca aagttgactt ccccgcacca ttggcaccga ttatagccaa aacctcacct
     2281 ggcataactt gaaactctac atcgaacaat gcacgcaact cgccataata ggctgagagt
     2341 tcagaaactg ttagcagcgg gcgtttacca ccccggcctt cttcggcgaa gaagccacgt
     2401 ttatgctccg agatagacac gtcgaacctc atctgttgcc ataacttctt gcggcgtacc
     2461 catcgcaatg actttgccac ccgccaaagc catcaagcgg tcggtggcgg tcatcattgt
     2521 tttcatcacg tgctcaatcc aaactaccgt aataccggag agctgaattt ctttaatcaa
     2581 ggcgataaat tcatcaacct ccatatcggt tagaccagca gcgacttcgt caattaacaa
     2641 taaggaagga cgcgtcgcta aagagcgtgc tagttcatgc cgttttctaa gcaaaagagg
     2701 caaacggcct gccaaggtat ttcgagcagc cgtcattccg gttagatcca gcacttgccc
     2761 aatccaaccc tcgcactcaa cctcttccaa gccacctcca aacatcgccg ctactttaag
     2821 attgtcataa acagtcatat gcgaaaaagg ctttggcacc tgataaatac gcgacatacc
     2881 gaggcgagcg cgctcaaagg cgagtaaaat ggatatgtct ttgcctcgga aaacgatttg
     2941 cccagcatcc ataggtaaat ttccggcaag caacgcaaag atcgtcgtct tgcccgcgcc
     3001 gttcgggccg atgatgccga gtatctctcc ttcattaaca gagaaagaaa tattttccgc
     3061 aactcgaatg gcaccaaagg atttacttag gccttctaca gaaagaatag tatctgccat
     3121 tatttgtgcc tccgagattg gaaggcggag gcgcgccgcg gcatgaaatt cattaattta
     3181 aaaatggcct gacagagggg gctttgactg tcaccaaacc cagatatcgc attgaaatga
     3241 tttttacctg gcagagatac ccgcctaact ttattacctt ttgccgccca ggcttttgaa
     3301 aagtcttcgg attggcggct aaattctggc gtttcatcac cgccataggt aattaaaagt
     3361 ggcgtagaaa ctgaatgcac tttatactgc ggtgaattgc gctcaattat cgccggatcc
     3421 aaccgcagtt ctttttgcat gaaagaatgc tgcaacggtg cgatatcaaa tagaccgctg
     3481 atcgagatac cacctttgat a
//
LOCUS       DASCNL010000057         1071 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000157954, whole genome shotgun sequence.
ACCESSION   DASCNL010000057 DASCNL010000000
VERSION     DASCNL010000057.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000157954"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..823
                     /locus_tag="QF359_00735"
     CDS             <1..823
                     /locus_tag="QF359_00735"
                     /inference="COORDINATES: protein motif:HMM:NF024825.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85465.1"
                     /translation="FSANAGHAIYAGKKCHKNFFNVSWENSQNAHATGIYLNKQGVKN
                     LYILSLNYAAGKQVVGGIERGYKGKVIGKDLVPMSHKDWSAELTKIRAAKPDAVIAFY
                     PGAWGPKFFGQYAQAGLNKTIPLYHVFSIDMGNLPIFQKIGLNVLNTFQTAQWSPDFK
                     NAASQKFVSGFKKKYGVTPNHFAAQAYETIMLIKSGVDAVGGDMSKMDAMRAAFEKAD
                     FAAVRGKFRYEKNHYPIQDFYAREVVKGADGKWTIVQRGLVVSDSRAYNHKDCKR"
     gene            922..>1071
                     /locus_tag="QF359_00740"
     CDS             922..>1071
                     /locus_tag="QF359_00740"
                     /inference="COORDINATES: protein motif:HMM:NF015047.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HJO85466.1"
                     /translation="MKTRITELLGIKYPIIQGGMHHVGFAELAAAVSNAGGLGIITGL
                     TQPTPV"
BASE COUNT          289 a          240 c          259 g          283 t
ORIGIN      
        1 ctttagcgcc aatgccgggc acgctatcta tgccggcaaa aagtgccata agaatttttt
       61 caacgtgtca tgggaaaaca gtcaaaacgc ccacgccacc ggcatttatt tgaacaagca
      121 aggcgtaaaa aacctttata ttctgtcgct taactatgcg gctggtaaac aggtcgtagg
      181 cggtattgag cgtggctata aaggtaaagt tattggtaaa gatctggtgc caatgagcca
      241 caaagactgg tcggcggaac ttactaaaat tagggctgcc aagcctgatg ccgttatcgc
      301 cttttatcct ggcgcatggg ggccaaagtt ttttggccaa tatgcccaag ccggcttgaa
      361 taagacaata ccgctctatc atgtcttttc gattgatatg ggcaatctgc cgatctttca
      421 gaaaattggt ttaaatgtct tgaatacgtt ccaaaccgct cagtggtcgc cagattttaa
      481 aaacgccgcg agccaaaagt ttgtttctgg gtttaaaaag aaatatggcg taacgcctaa
      541 tcacttcgcg gcccaggctt atgaaaccat catgctgatt aaatccggcg ttgatgcggt
      601 gggcggcgat atgtccaaaa tggatgctat gcgggcagcc tttgaaaaag cagactttgc
      661 cgccgttcgt ggtaaattcc gctacgagaa aaaccattat ccgatccagg atttctacgc
      721 ccgtgaagtg gtcaaaggtg cggatggaaa atggactatt gtgcaacgcg gtttagtggt
      781 tagcgattct cgtgcttata accacaaaga ctgcaaacgc taaaacttag cgttctattt
      841 aataaaaaag gggagcgtgt tctggtggca cgctcctttt ttttgctcta agttgcgcct
      901 tctggtaaat ggagatttaa attgaaaacc cgaattacag aattacttgg catcaaatac
      961 ccgattattc agggtggtat gcaccatgtc ggtttcgccg aactggcggc agcggtttct
     1021 aacgccggcg gcctcggcat tatcactggc ctcactcaac caacgccagt t
//
LOCUS       DASCNL010000058         2698 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000161000, whole genome shotgun sequence.
ACCESSION   DASCNL010000058 DASCNL010000000
VERSION     DASCNL010000058.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000161000"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="QF359_00745"
     CDS             <1..246
                     /locus_tag="QF359_00745"
                     /inference="COORDINATES: protein motif:HMM:NF013155.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HJO85467.1"
                     /translation="MQNHPLRLMLEKGLKVTVNSDDPAYFGGFINENFFAVTEALELS
                     EEHLYTLARNSFEASFISEGQKTTYIAKLDEFAASNG"
     gene            501..1871
                     /locus_tag="QF359_00750"
     CDS             501..1871
                     /locus_tag="QF359_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
                     /protein_id="HJO85468.1"
                     /translation="MPIDNSALGNPEQLKDPNYTPPMASAIPLGIQHVLAMFVSNVTP
                     AIIIAGAAGFGFGSKSPDFPNLIYMIQMSMLFAGVATLFQTIGFGPVGARLPIVQGTS
                     FAFIPIMIPLVAGKGVDAIAILMGGIIVGGLFHACLAPFIGRIRVALPPLVTGLVVLM
                     IGLALVKVGIQYAAGGVPAMSKGLPEFGSLQNWSVALVVIVVTLGVKFYTRGILSVSA
                     VLIGIIAGYIVAYFMGMVSFANIGRAAVFALPNPLHFGVEFTAGAIIGFCLMAIVSAV
                     ETVGDVSGITKGGAGREATTTELKGATFADGFGTFIAGFFGGLPNTSFSQNVGLIAMT
                     GVMSRHVVTIGAIFLIVAGLIPKVGAIISSVPIEVLGGGVIVMFGMVAAAGISLLSDV
                     TWNRRNMIIFAISISLGLGLQLVPGALQHLPGTAKVLLSSGLLPAAFLAIILNLILPE
                     EATEEG"
     gene            2067..2444
                     /locus_tag="QF359_00755"
     CDS             2067..2444
                     /locus_tag="QF359_00755"
                     /inference="COORDINATES: protein motif:HMM:NF014698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HJO85469.1"
                     /translation="MFNFLDDKFSVAFSTKHMETGHLLPEAPDLTEAQAEAIKLAEEI
                     YEEFLYAIDLEQGDMQFVNNSLPLHTRTAFEDWPEPERKRLLWRLWLVAPDMRPPTPY
                     IKHWRGGLLLEGTKCKGRVGLKA"
     regulatory      2494..2653
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
BASE COUNT          633 a          639 c          692 g          734 t
ORIGIN      
        1 atgcaaaatc atcccttgcg cttaatgctg gagaagggat tgaaggtgac cgtcaattca
       61 gatgatccgg cgtattttgg tggttttatc aacgagaact tttttgccgt taccgaggcc
      121 ttggagctgt cggaggagca cctttatacc ctggctcgaa attccttcga ggcgtctttt
      181 atcagcgaag gtcaaaagac aacttatatc gccaagcttg atgaatttgc cgcctcaaat
      241 ggttgatatt tttccggata aaacctgcat ttcatgatgg aacctgaaac cgcgttgcat
      301 tggcaacggc gcacgattct attgcagggg gcgtttttga ctaaatggtg aatgataata
      361 acagaatttt tttatcaaaa tcaattaatt agctttttaa ctatactagt tgctgggtat
      421 agggataaac ttttatcaag aataaaaaat catttgaacc agaggtggaa gcctgactaa
      481 actgaaataa ggatgagatc atgccaatag acaattcagc tcttgggaac ccagaacaac
      541 ttaaagatcc caactacaca cctccaatgg cctcggcaat tccattgggt attcagcatg
      601 tcctagcaat gtttgtcagc aacgtaacac cggcgatcat catcgccggt gcagcaggtt
      661 ttgggtttgg gtcaaaatcg cctgattttc cgaatcttat ttacatgatc caaatgtcga
      721 tgttgttcgc cggcgtggca acgctgtttc aaaccatcgg cttcggaccg gttggggcac
      781 ggttgccgat cgttcagggt acaagctttg cctttattcc gattatgatt ccgctggtcg
      841 cgggaaaagg tgttgatgcc attgccattc ttatgggcgg gattatcgtc ggcggacttt
      901 tccacgcctg tctggccccg ttcatcggtc gtatccgcgt agccttaccg ccgttggtta
      961 caggcctagt cgttctaatg ataggtttgg ctttggttaa ggtcggcatt cagtatgccg
     1021 ccggcggcgt accggccatg agcaaaggct tgcccgaatt cggcagcttg cagaactggt
     1081 cagtggcgtt ggttgtcatc gtggtgacac taggcgttaa attttatacc cgcggcattt
     1141 tgtccgtttc cgccgtcctt atcggcatca tcgccggcta catcgtcgcc tatttcatgg
     1201 gcatggtcag ttttgccaat atcggccgcg cggccgtgtt tgcgctgccg aatccgcttc
     1261 atttcggcgt cgagtttacc gccggggcga tcatcggttt ctgcttgatg gctattgtgt
     1321 cggccgtcga aaccgttggc gatgtttccg gtatcaccaa gggtggtgct ggtcgggaag
     1381 cgacaacgac ggaacttaaa ggcgcgacat tcgccgatgg tttcggcacc tttatcgcgg
     1441 gcttttttgg cggtttacca aatacgtcgt tctcacagaa cgtaggtctc atcgccatga
     1501 ctggcgtgat gagccgtcac gtcgtcacca ttggcgcaat tttcctcatc gttgcaggac
     1561 tgataccgaa agttggtgct atcatttcct cggttcccat tgaggtgctc gggggcggtg
     1621 tcatcgtgat gtttggcatg gttgccgccg ctggtatttc gctgctgtct gacgtcacat
     1681 ggaatcgtcg caatatgatc atattcgcaa tttcaatttc tttgggattg ggactgcaac
     1741 tggttccggg ggctctccag catttgccgg gaaccgccaa agtgttgctg tcatcgggtt
     1801 tgttgccagc ggcattcttg gcaatcatcc ttaatctcat cctgcccgaa gaggcgactg
     1861 aagaaggcta aggtggtcac gtaggccatt ccaacgaata accaccatat cacggctgga
     1921 gcggtacgca tcgctccagc cgatttacta tgcctggcta atgccgatgg ccagtccctc
     1981 gatgttaaga cgatccgggc ggtaccaatc gacggaccag tttatcatgc caaatagatt
     2041 caggcccgct atagatatga aagccggtgt tcaatttcct cgatgataaa tttagcgtcg
     2101 cttttagcac caaacatatg gagacgggac acttactccc agaagcgcct gatttaaccg
     2161 aggctcaggc cgaagcgata aaactcgcgg aagagattta tgaagaattt ctttatgcga
     2221 tagaccttga gcagggtgat atgcagttcg tcaataattc gttgccgctt catacccgga
     2281 cggcctttga agattggccc gaacccgagc gaaaacggtt gctctggcgg ctgtggctgg
     2341 tggcgccgga tatgcgccca ccgacgcctt atattaaaca ttggcgcggc ggcctacttc
     2401 ttgaaggtac caagtgtaag ggccgagttg ggttaaaagc gtaaataaaa ttgatcaaaa
     2461 ctcaattcca gattgacttc cgaagcgcat ccgtttaacc atcttaagga tggttccact
     2521 ttgtcatagg gtggatgaat tgggaatacg gtgcatcaac aataatctga taattccgtg
     2581 actgcccccg caactgtaag catattggta acacaatgcg agtcagatac ctgccatcaa
     2641 aactgaacac ggagggtgaa ttatcatgaa tgaagttaaa gttttaaaac aagacgcc
//
LOCUS       DASCNL010000059         1912 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000164205, whole genome shotgun sequence.
ACCESSION   DASCNL010000059 DASCNL010000000
VERSION     DASCNL010000059.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1912)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000164205"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="QF359_00760"
     CDS             <1..199
                     /locus_tag="QF359_00760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85470.1"
                     /translation="HQVFTTRVTFPENRNSMWIIDEAVEVSIPITKSRPGPNSKIYIG
                     FQLTPEQIKFNREKQRVPGIR"
     gene            213..1316
                     /gene="gcvT"
                     /locus_tag="QF359_00765"
     CDS             213..1316
                     /gene="gcvT"
                     /locus_tag="QF359_00765"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HJO85471.1"
                     /translation="MSDTLQSTLLHNLHVSLGAKMVPFAGYDMPVQYPSGILTEHRHT
                     RGQAGLFDVGHMGQAILRGDNVAAALETLMPGDVAGLEQGQMRYSQFTNEAGGILDDL
                     MVTNRGDHIFLVVNAGCKDADFAHIQKHIGDRIELEILANRGLIALQGPMAATVLNRH
                     AQGVEAMPFLTMQDIEIDGIACLVSRAGYTGEDGYEISVPGEKSVELAELLLAEAEVE
                     PIGLGARDTLRLEAGLCLYGHDIDETTSPIEAGLLWSIGKRRREDGGFLGAERIISEI
                     ENKPSRRRVGILPDGRAPAREGTEITDQSGNNIGVVTSGGFGPTVDGPIAMGYVSREN
                     AAVDTMLQLTVRGKRLNSKVIKLPFVEQNYYRG"
     gene            1335..1712
                     /gene="gcvH"
                     /locus_tag="QF359_00770"
     CDS             1335..1712
                     /gene="gcvH"
                     /locus_tag="QF359_00770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HJO85472.1"
                     /translation="MATLKFTEDHEWIAIDGDIGTVGISDYAQGQLGDVVYVEVPEAG
                     TSFNKGDEAAVVESVKAASEVYAPADGKIVETNKDLEDNPGTVNSDAQSAGWFYKIKF
                     NNAADIDGLMDENAYMAYVAELN"
     gene            1712..>1912
                     /locus_tag="QF359_00775"
     CDS             1712..>1912
                     /locus_tag="QF359_00775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase"
                     /protein_id="HJO85473.1"
                     /translation="MRYLPLTDQDRQDMLVAIGAPDMAALYKDVATEVLLDQPVDLPG
                     VKGELEVEQIISSLAAKNLGSGA"
BASE COUNT          499 a          417 c          536 g          460 t
ORIGIN      
        1 ccaccaggta ttcaccacca gggtaacatt tccggaaaat cgcaactcca tgtggattat
       61 tgatgaagct gttgaggtat ctattccgat aacgaaatca cgtccaggac caaattctaa
      121 aatttatata ggcttccagt taacgcccga acaaataaaa tttaatcggg aaaagcagcg
      181 ggtgccagga attcgataac tgagcagaat aaatgagtga tactttacag tccaccttac
      241 tccataacct tcacgttagt ttgggcgcaa agatggtgcc ctttgctggc tatgacatgc
      301 cggtccaata cccgagcggt attttaaccg agcaccgcca tacccgtggc caggccgggt
      361 tattcgatgt tggccacatg ggccaggcca ttttacgcgg tgataatgtc gcggcggcac
      421 ttgaaacctt gatgccgggt gatgtcgctg ggcttgaaca aggccagatg cgctactccc
      481 agtttaccaa cgaagcgggt ggtattctcg atgatctaat ggtgactaat cgtggtgacc
      541 atatttttct agtggtgaat gccggctgta aagatgccga ttttgcccat attcagaagc
      601 atattggaga tcgcattgag cttgaaatat tggctaatcg tggcttgatc gctttgcaag
      661 gcccgatggc tgcaacggta ttaaaccgtc atgcacaggg ggtcgaagca atgccgttcc
      721 tgactatgca ggatattgaa atcgatggta tcgcgtgttt ggtctcgcgc gccggttata
      781 ccggcgaaga tggttacgaa atttcagtgc cgggtgaaaa aagtgtcgag ctggcggaat
      841 tgttgctggc cgaagctgag gttgaaccga ttggtctggg tgcccgggat acgctgcgat
      901 tagaagccgg actttgtctg tatggtcatg acatagatga aacaacctca ccgatcgaag
      961 ccggattgct ttggtcgatc ggcaagcgcc gccgtgagga cggtggtttc ttgggtgccg
     1021 agcgaatcat tagcgaaatt gagaataaac cgtcgcgccg gcgggttggc attctgccag
     1081 atggccgggc accagcgcgg gaaggcaccg aaataaccga tcaatcgggc aataatattg
     1141 gcgttgtaac cagcggtggc tttggcccga ccgtcgatgg accgatcgct atgggctatg
     1201 taagccggga gaatgctgcc gtcgatacga tgcttcaatt gacggtacgg ggtaaaaggt
     1261 taaattcaaa agtaatcaaa ctaccgttcg tggaacaaaa ttattatcgt ggatgaggaa
     1321 caggaagaca aaagatggca acattgaaat ttactgaaga tcatgaatgg attgccatag
     1381 atggcgatat cggcacggtc ggtatctcag actacgcaca aggtcagctt ggtgatgtag
     1441 tttatgttga agtgccggaa gcaggcacta gtttcaacaa aggcgatgaa gcggcggtag
     1501 tcgaatccgt caaggcagcc tctgaggttt atgctccggc cgatggcaaa attgtcgaaa
     1561 ccaacaaaga tttagaagat aatcctggaa ccgttaattc ggatgcgcaa agtgccggct
     1621 ggttctataa aattaaattc aacaatgccg ccgatatcga cggcttgatg gatgagaatg
     1681 cctatatggc atatgtcgcg gaactcaact aatgcgttac ctgccgctca ctgatcagga
     1741 tcgccaggat atgctggtgg caatcggcgc accagatatg gcggcgctct acaaagatgt
     1801 tgccaccgag gttttgcttg atcagccggt tgatttgccg ggcgtgaagg gtgagctgga
     1861 ggtcgaacag attatctcaa gtttggcggc aaaaaatctc ggttccggag cg
//
LOCUS       DASCNL010000060         1230 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000167768, whole genome shotgun sequence.
ACCESSION   DASCNL010000060 DASCNL010000000
VERSION     DASCNL010000060.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000167768"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(193..>1230)
                     /locus_tag="QF359_00780"
     CDS             complement(193..>1230)
                     /locus_tag="QF359_00780"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJO85474.1"
                     /translation="ERSAKMLNEIGPGESNYNRYDRLIVDEACSWLQEAATEDNDKPW
                     VLYLGFVAPHFPLVVPEEFYNLYPLDQLPPRKLDPAEGIQRHPWLQRMDDFSQVDRNL
                     SPEQKLQAVAAYFGLCTFVDHQIGRVLEALDEVGLTADTRIIYTSDHGDNVGARGMWG
                     KSNFYEESASIPLIIAGDGVPEGKVSTTTTSLLDSYQTIMDGVGLELTAEEQNLDGES
                     WFELANSADDPERIVFSEYHAASSPTGAFMLRKGKYKFNYYVDYEPELFDLKTDPEET
                     TNLAGDPDYANVIAEYEKKLRNICDPEKTDRQAKTDQNALIEKFGGREAALNTGTPGA
                     TPVPVVLPPYN"
BASE COUNT          313 a          314 c          297 g          306 t
ORIGIN      
        1 atccaacccg cagaacgccg aaaagccgag ccgcaccaat ggtggggccc cgacggttgt
       61 ttccgaaaaa tatcgcaaga attatggtgc catcgattgg tcgaaaaaga tgactccgaa
      121 ttgaaaaaaa ccaaaaacca cgggtgccgg cgagcgaacc gttaactaaa ctcgctttta
      181 tatcaaaacg gatcagttat aggggggcag gacaaccggg accggtgttg ccccgggtgt
      241 gccggtgttg agcgccgcct cgcggccacc gaatttttca atcaatgcgt tttgatctgt
      301 tttggcctgg cgatcggtct tttcaggatc acaaatgttt cttaattttt tttcatactc
      361 tgcgattaca tttgcatagt cggggtcgcc tgccaaatta gtggtttctt ccggatcagt
      421 cttaagatca aacaactccg gctcataatc gacgtaataa ttaaacttgt attttccttt
      481 gcgcagcata aaggcgccgg tcggtgacga ggcggcatgg tattcgctaa aaacaatacg
      541 ctcaggatca tctgctgaat tggctaactc aaaccaggat tcgccgtcga gattttgttc
      601 ctccgccgtc aattctaatc cgacgccatc catgatcgtc tggtaactgt cgagcagcga
      661 ggttgtcgtg gtgcttactt ttccctctgg gacgccatca ccggcaataa tcaaaggtat
      721 gctggcactt tcttcgtaga agttcgattt gccccacata ccgcgggcac cgacattatc
      781 accgtggtca ctggtataaa taatccgtgt gtcagcggtt aaaccaactt cgtccagcgc
      841 ctccaataca cggccaatct ggtgatcgac aaaagtacaa agaccaaaat aggcggcgac
      901 ggcctgtaat ttttgttcag gtgacaaatt tcgatccact tgcgagaagt catccatgcg
      961 ttgcagccag ggatgacgct gaataccttc tgccggatca agcttgcgtg gcggcaattg
     1021 atccaaagga tagagattgt aaaactcctc cggcacgacc agcgggaaat gcggcgcaac
     1081 aaaaccgaga tacagcaccc agggtttatc gttatcctca gtggcagcct cttgtaacca
     1141 gctgcaggct tcatcgacga tcagtcggtc atagcgatta taattggact caccaggacc
     1201 gatttcattg agcattttgg ccgaccgttc
//
LOCUS       DASCNL010000061         2016 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000168691, whole genome shotgun sequence.
ACCESSION   DASCNL010000061 DASCNL010000000
VERSION     DASCNL010000061.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000168691"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="QF359_00785"
     CDS             <1..422
                     /locus_tag="QF359_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphomannomutase"
                     /protein_id="HJO85475.1"
                     /translation="SGHIFFADKYYGYDDAIYSALRLLSILTQSDQSVADMRDSLPQM
                     LNTPELRFECLEARKFAVIEEVKERLARVSGIAVHDIDGVRVETEDGWWLLRASNTQA
                     VLVARCESTDEAGLSRLKATVRDQLIASGIEPPADFD"
     gene            complement(855..>2016)
                     /locus_tag="QF359_00790"
     CDS             complement(855..>2016)
                     /locus_tag="QF359_00790"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HJO85476.1"
                     /translation="GSRTILFIAGFLLAALIFANNPATAKYASFVIDAKTGKIYHATN
                     ADTRNYPASLTKLMTLYLLFEAIEKKQFTFSTRLSVSRRAANRPASRLGLKRGQSIQV
                     KDAVMALIVKSANDVASVVAETIGGTERRFALLMTDKARKLGMSRTTFRNASGLPHRG
                     QMSTAKDMATLTRAIINHFPQYYHLFKRQIFTFQGRTYRSHNKMLKSYPGAEGMKTGY
                     IRASGYNLITTAKRDNQRLIGVVFGGNTSRSRNRHMKTLLTKAFSQTEPPVLIAKAKR
                     RQGAYRTPKRQAKPVANSKDRIWGIQVGAFYTSKTAYNIALDVSNKYASVLNGGQVKV
                     MTLRKSRNRILYRARILDLNRRNVYRTCRLLKKRRKPCLELNLPATVEVASR"
BASE COUNT          492 a          446 c          520 g          558 t
ORIGIN      
        1 tgagcgggca tatattcttt gccgacaaat attatggcta tgatgatgcg atttattcgg
       61 cgcttaggtt gctgtctatt ttaacgcaat ccgatcagag cgtcgctgat atgcgtgata
      121 gtttaccgca gatgctcaac acaccggaac tgcgtttcga atgtttggaa gcgcgcaaat
      181 ttgcagtgat tgaagaagtg aaagagcggc tcgccagagt tagcggcatt gccgtgcatg
      241 acattgatgg cgtgcgggtc gaaaccgaag acggttggtg gctgctccgt gcatcaaaca
      301 cccaggctgt cctggtggcg cgttgtgagt caaccgatga ggcaggtctc tcgcggctta
      361 aagcaacggt gcgcgatcaa ctcatcgcca gcggcatcga accgccggcg gattttgatt
      421 aggaagtaac caagaagttc acgaagaaca ccaagcaata tgtttaaaga aaaattcggg
      481 tatacggaaa accagcggtt tcggtatggg tatttgatca catccaaatt acgataacgt
      541 ctttttcttc ttcttcattt gttgggtaac tttttcgaat tagcacgatt ttactttccc
      601 cgggatcctt tagcttcccc tccaaacaat gatatctatc ttctgaaaaa gaaagattta
      661 gttcagcttc aaaataaata caattcttag atcgggatca acgtagtacg tccacgtcat
      721 caacaacttt cctctctggc cccattatct aaatatactt attttattat gattatattt
      781 gtgctcagta ttcaatcaat tcaataaaat tcactttgat ctttatgcta gaaaagtaaa
      841 aaaagttaag ctgtttaacg tgaagcaact tcgacggtgg ctggtaagtt gagttccaaa
      901 cacggtttgc ggcgtttttt caacagccgg caggtgcgat agacattgcg gcggttgagg
      961 tcgagaatac gcgcccggta tagaatgcgg ttgcgggatt tgcgcaatgt catgactttg
     1021 acttgaccgc cattgagcac actggcgtat ttatttgaga catcaagtgc aatattgtaa
     1081 gcggttttac tggtgtaaaa agcgccaacc tgaatgcccc agatacggtc tttactattt
     1141 gccacgggtt tggcttggcg tttgggcgtt cgataagcgc cttgtctgcg tttggccttg
     1201 gctatcaata ccggcggttc agtttgacta aatgccttgg tcagcagtgt tttcatatgc
     1261 cggtttcggg agcgcgaagt attgccaccg aacaccacac caatcagccg ttggttgtcg
     1321 cgcttggcgg tcgttatcag attgtagccc gaggcgcgga tatagccggt cttcatacct
     1381 tccgctccgg gataagattt cagcattttg ttatgggagc gataggtgcg gccttggaag
     1441 gtgaaaatct ggcgtttgaa taaatgataa tattgcggaa agtggttaat gatggcccgg
     1501 gtcagtgtcg ccatatcttt ggcggtcgac atttgaccac ggtgcggcaa gcccgacgca
     1561 ttgcggaacg tcgtccgcga catccccagt ttacgtgctt tgtcggtcat taggagagca
     1621 aagcgccgtt ccgtgccgcc aatagtttcg gcaacgactg aggccacgtc gttggctgat
     1681 tttacgatca acgccattac tgcgtctttg acctggattg attgcccgcg tttcagaccg
     1741 agacgggagg ccgggcggtt tgctgctctc ctggaaacag acaggcgtgt cgaaaaggtg
     1801 aactgctttt tctcgatcgc ttcaaacagc aaatagaggg tcatgagctt ggtcagcgaa
     1861 gccggatagt tccgcgtgtc cgcattggtt gcatgataaa ttttgccagt ttttgcatcg
     1921 atgacaaaag aggcgtattt agccgtcgcg ggattgttgg caaagatcaa tgcagccaac
     1981 agaaaaccgg caatgaacaa tatcgttctg ctgcct
//
LOCUS       DASCNL010000062         1056 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000169804, whole genome shotgun sequence.
ACCESSION   DASCNL010000062 DASCNL010000000
VERSION     DASCNL010000062.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1056)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1056)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000169804"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1056
                     /locus_tag="QF359_00795"
     CDS             <1..>1056
                     /locus_tag="QF359_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HJO85477.1"
                     /translation="KTPPELSGDQNPWRLAVVRELLPERADIGIIDSRVGTIPLTEMK
                     WAQPWLKGELLGKRVKIPSDVLQVGDVIVVEKIFENKDGKTYPNNTFVLRQLPEIEGA
                     IVALDPHTGRILAMSGGFSYQRSQFNRVIQARRQPGSAFKPFVYLAALDKGFTPSSLI
                     LDAPFVIDQGPGLPKWRPANYTKKFYGPSTMRLGLEKSRNLMTVRLAQTIGIETITNY
                     AKRFGIVKEMPKQLSMSLGAGETTLLRLTAAYAMLVNGGKKIVPTLIDRIQDRHGKTV
                     FKHDPRKCEKCRSAFWTKQLVPNVPDHREQVTSPASAYQIVSMLEGVVQRGTGRRLRD
                     LGKPLAGKTGTTNQTLDT"
BASE COUNT          265 a          258 c          296 g          237 t
ORIGIN      
        1 aaaaccccac cggaactgag cggtgatcag aatccttggc gcctggcggt ggtgcgggaa
       61 ctgttgcctg agcgagctga tatcgggatt atcgatagcc gggtagggac gataccgctg
      121 actgaaatga aatgggcgca gccttggctc aaaggcgagt tgcttggtaa gcgggtaaaa
      181 ataccctcag atgtattaca ggtaggtgac gttatcgtgg ttgagaaaat attcgaaaat
      241 aaggacggca aaacctatcc caacaataca tttgtcctca ggcaactgcc ggaaattgag
      301 ggagcgattg ttgcactcga tccgcatacc ggacgtattc tggcgatgtc cggcggcttt
      361 tcttatcagc gcagtcaatt caaccgggtc attcaagcga ggcgtcagcc tggctcggcg
      421 tttaagccct ttgtttattt ggcggcgctc gataaaggtt ttacgccgtc ttcgcttatt
      481 cttgacgcgc cctttgtgat tgaccaggga cccggcttgc cgaagtggcg gcccgcaaac
      541 tatacgaaaa agttctatgg gcccagcacg atgcggctcg ggctggagaa gtcgcgtaat
      601 ttgatgaccg tgcggctcgc ccaaacaatt ggcattgaga cgattactaa ttatgccaag
      661 cgctttggta tcgtcaaaga aatgccaaag cagctttcga tgtctttggg ggcaggagag
      721 acaacattgc taagactaac ggcagcctat gcgatgctgg ttaatggcgg taagaagatt
      781 gtaccgaccc tgatcgaccg cattcaagac cggcacggta aaactgtttt caaacatgat
      841 ccgcgcaaat gtgaaaaatg ccgttcagct ttctggacca aacaactggt gccgaacgtg
      901 ccagatcatc gtgaacaagt caccagtccg gccagtgcgt atcaaatagt ttcgatgctg
      961 gaaggggttg tccagcgggg cacgggacgc cgcctgcgcg atcttggcaa acccttggcg
     1021 ggtaaaaccg gcaccaccaa ccaaaccttg gatacg
//
LOCUS       DASCNL010000063         1438 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000171835, whole genome shotgun sequence.
ACCESSION   DASCNL010000063 DASCNL010000000
VERSION     DASCNL010000063.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1438)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1438)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000171835"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..324
                     /locus_tag="QF359_00800"
     CDS             <1..324
                     /locus_tag="QF359_00800"
                     /inference="COORDINATES: protein motif:HMM:NF014173.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HJO85478.1"
                     /translation="QALQQLVRANLLTGVRGPRGGYNLARERRRISVGDIVHVMRNME
                     QTGDPLDEETGSELTQSVIRPLWQEIQAEMIDRLNDISIDHLCQRAQSHGVVSEGHQS
                     LDFTI"
     gene            372..1340
                     /gene="cysK"
                     /locus_tag="QF359_00805"
     CDS             372..1340
                     /gene="cysK"
                     /locus_tag="QF359_00805"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HJO85479.1"
                     /translation="MTDNKGEFRGRIYNSIVDTIGATPLVRFNCLPGEDGCKADILGK
                     CEFFNPLASVKDRIGNAMIDAAETAGELQPGSVIVEPTSGNTGIALAFVAAARGYRLI
                     LTMPESMSMERRKMLYLLGAEIELTPAAKGMPGAIARAEELLKEHPGAFMPQQFSNDA
                     NPEVHRNTTAEEIWQDTDGKVDVVISGVGTGGTLTGVAEVIKAKKPDFKMIAVEPEDS
                     PILSGGVPGPHKIQGIGAGFVPDNLNSDMVDEVIQIGNETAFVTARRAAKSEGLPVGI
                     SSGAAIAAALEIGARPDMASKMIVAILPSFAERYLSTALFDGLGGD"
BASE COUNT          349 a          343 c          410 g          336 t
ORIGIN      
        1 caggccttgc aacaattggt gcgggcaaat ctgttgactg gcgtacgcgg cccacggggt
       61 ggatataatc ttgcgcgtga acgccgccgc atatcggtcg gtgatatcgt gcatgttatg
      121 cgcaatatgg aacaaaccgg tgatccactg gatgaggaaa ccggatcgga attgacccaa
      181 tcggttatcc gcccgctgtg gcaggaaatc caggcggaga tgattgatcg cctgaatgat
      241 atttcgattg atcacttgtg tcagcgagct caatcacacg gggttgtcag cgaaggccac
      301 cagagcctgg attttactat ttaacgacaa atatttgagg ccggtaacgg accggtaagc
      361 gggagaataa gatgacggat aataagggtg aatttagagg tcggatctac aacagcattg
      421 ttgatactat tggcgcaacg ccgttggttc gcttcaactg cttgccggga gaagacggct
      481 gcaaagccga catattggga aaatgtgaat tttttaaccc actggcctcg gttaaggatc
      541 gcatcggcaa tgctatgatt gatgccgctg agactgccgg tgagctgcag cccggttccg
      601 tcatcgtaga gccaacttcc ggcaatacag gtattgcctt agcttttgtg gctgctgcca
      661 gaggttatcg tttgatcctt accatgccgg aaagcatgtc gatggaacgc cgcaaaatgc
      721 tgtatctttt gggtgctgaa attgagttga cacccgccgc caaaggcatg ccgggtgcaa
      781 tagcgcgggc ggaagaatta ctcaaagaac atcccggtgc ctttatgccg caacagttca
      841 gcaatgatgc caatccggaa gttcaccgca acaccacagc ggaagaaatt tggcaggaca
      901 ccgacggcaa agttgatgtg gttatctcag gtgttggcac cggcggcacg ctgaccggtg
      961 tcgctgaagt aataaaagcc aaaaaaccag actttaaaat gattgccgtg gaaccggaag
     1021 acagtccaat attatctggt ggcgttccgg gcccgcataa aatccaaggc atcggcgccg
     1081 gcttcgtgcc ggataatctt aattcagata tggtcgatga agttattcag atcggcaatg
     1141 agacggcctt tgtgacggcg cggcgcgccg ctaagtcaga aggcttgccg gttggtattt
     1201 cttctggcgc agcgatcgca gcggcgcttg aaatcggtgc ccggccggat atggccagca
     1261 aaatgattgt cgccatcctg ccatcatttg ccgagcgcta tttgtcgacc gctttgtttg
     1321 atgggcttgg tggcgactga taattgagga ttggccgcta aatgcccctt tccgacgaac
     1381 aggttgaacg ctacgcccgc catattttat tacccgagat tggtggtgcc ggacaagc
//
LOCUS       DASCNL010000064         1170 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000171875, whole genome shotgun sequence.
ACCESSION   DASCNL010000064 DASCNL010000000
VERSION     DASCNL010000064.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000171875"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(36..914)
                     /locus_tag="QF359_00810"
     CDS             complement(36..914)
                     /locus_tag="QF359_00810"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HJO85480.1"
                     /translation="MTKTPPKNPTTKEQKLSKTYVNDAWQDGSPPVLTPNSQAMWLST
                     IVFDGARALKGHLPDLDLHSERVNNSAIELGMNPTKTTAEIIQLSKDGVAMFPDDAEL
                     YICPMYYAEDGFITPDPDSTKFVLSIYEAPLPEPAGFRACKSSFRRPSPDMAPTNAKA
                     SCLYPNVARGVSEARKKSFDCGVVLDPDGNVAEFSYTNLFFAKDGTVHTPVTNGTFLN
                     GVTRQRVIQLLRDNGIEVQDRTISYEELGDADELFSTGNYSKLLPCIGLDDRDFQPGP
                     LYQNARDLYFEFVERS"
     gene            complement(955..>1170)
                     /locus_tag="QF359_00815"
     CDS             complement(955..>1170)
                     /locus_tag="QF359_00815"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HJO85481.1"
                     /translation="TLEPCPMCATAISFARLRRLYFGAFDPKGGGVEHGPQIYNQPTC
                     HHAPEIYSGIEESRCSELLKDFFTQRR"
BASE COUNT          280 a          292 c          316 g          282 t
ORIGIN      
        1 ggtatccaag gggtgcctga accaagattc ggcggctaac tccgctcgac aaactcaaag
       61 tataaatcgc gggcgttttg gtaaagcgga cccggctgga agtcacggtc atccagccca
      121 atacaaggca gcagcttaga ataattaccg gtactgaaga gctcatcagc gtcgccaagt
      181 tcttcgtaac ttatcgtgcg gtcttgcacc tcgatgccat tatcccgcag caattgaatg
      241 acccgctggc gcgtgacgcc gttcaaaaat gtgccgttgg tgaccggagt atgaaccgtg
      301 ccgtccttgg caaaaaataa attggtatag gaaaattcgg cgacattacc gtccgggtcg
      361 agcacgacac cacagtcaaa gcttttcttt cgcgcttccg aaacgccgcg ggcgacattc
      421 ggatacaagc aggacgcttt tgcattggtc ggcgccatgt ccggcgatgg ccgccggaag
      481 gaagatttgc aggcgcgaaa gccggctggt tcgggcaaag gtgcctcata gatcgacagc
      541 acgaatttag tgctgtccgg gtcaggtgtg atgaagccat cctcagcata atacatcggg
      601 cagatatata gctcggcatc atccgggaac atggcgacgc cgtcttttga aagctgaata
      661 atttccgccg tagttttagt cgggttcata cccagttcaa tcgctgaatt gttgacccgc
      721 tccgaatgga gatcgaggtc aggcaaatgg cccttaagcg cccgggcgcc atcaaaaaca
      781 atcgttgaga gccacatcgc ctggctgttg ggagtcagca ccggcggtga gccatcctgc
      841 cacgcatcat tcacgtaagt tttcgaaagt ttctgttctt tggtggtggg gttttttggt
      901 ggtgtttttg tcatctttag gtcaattttc tatatttaaa caatgggcgg tgcattatcg
      961 tctttgggta aaaaaatcct ttaataattc gctgcagcgg ctttcttcga taccactata
     1021 aatttccggc gcatgatggc aagtaggttg gttgtaaatt tgcgggccat gctcaacacc
     1081 accgcccttg ggatcaaaag cgccgaagta aagccggcgc agccgcgcaa atgaaatcgc
     1141 tgtcgcgcac atcgggcagg gttccaaggt
//
LOCUS       DASCNL010000065         3180 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000173582, whole genome shotgun sequence.
ACCESSION   DASCNL010000065 DASCNL010000000
VERSION     DASCNL010000065.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3180)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3180)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000173582"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1986
                     /locus_tag="QF359_00820"
     CDS             <1..1986
                     /locus_tag="QF359_00820"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85482.1"
                     /translation="LLICGTDPYETKTILFTQWIMQGIQNGQKAIFMTPRRTAGVAYA
                     EKNGGLWLDVNPGTDLLVVNAIARIIAENDWQDKEWIKNWVNNKWGSSSGFGQGTRNT
                     PWQWRTTWGKFQTNGYEDWKKWLLKQDEFKLVNAAKVSGVNAKKIRQAAEWMAKPKGN
                     KRPKTSIMIEKGFYWSNNTGNTQAISALGIIVGAGGRPGQIIGRAGGHQRGGQRGGKY
                     PRNKSPMKVPGRRRRALDTDTYTMSGHTRLAHVIGTTWIQSMCGSQQLAKRFHELTLA
                     NPNQVRSYDKQDIIDTLKKRADSGGMVVINQEIYLVDPIGNRFADVIFPAATWGEEDF
                     MRANGERRLRLYQKFYDAPGEAKPDWWIIAQLSKRMGFEGFDWKNSNEVAEEMSRFSR
                     GSRKDFHQIKVVAKREGKTLHQKMREFGTNGIQGPVFLTEEGKLVGTKRLHDTTRKLS
                     ATGPEASNVFNKKLTHFNSQTGKCNIQKSPWSLYSDYWEWMKPRGDEMWCSSGRTNER
                     WQSGFDDRRRPYIVQRWPGNYVEISPEDAKKRGIESGDMVMVYSDRVPSLKETILGIE
                     GSDYSFAGQMKAGNIELTRAAVTGVAMVTRHIKKGMLYMDFLHTQQPANALEGRIVDW
                     ISGNYNFKMGTAKVKKIGVSPYKKTFRTMSFAPRDII"
     gene            1989..>3180
                     /locus_tag="QF359_00825"
     CDS             1989..>3180
                     /locus_tag="QF359_00825"
                     /inference="COORDINATES: protein motif:HMM:NF025030.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HJO85483.1"
                     /translation="MTLLNAEEILPLPGRPANSINSPAGHGSIQEEDIQRIYLSDVVD
                     VLAALLRDGVDVHRCGAARALGEIKSDQATEVLLEALLDEDEDVRTDAAEALAVIGDQ
                     RASKQLLKNLIGDPCSDVKMAALNALTKMKVAEVIPWLKRLLSWHDAEIIWDEDEFYE
                     GGWDSWVDLQIAAIKALAEFGVEDAVPEIVTAINDEDAQDLSEFAFSAFARMGAAGAG
                     ALVGYLDDKDSRHRRRAAVVLAGIDHDAARKAVLHGLKDPSKDVRLAIAGALNTNSFN
                     DQICEILLADQEPELRAIAILHVDDINVEQLISWLEDPAGEVQIAVFKRLMAMPNIKV
                     DADLVGKLQAKIAEDNPAAAAIALEAYTTLFGETASDTLLEILADQDQPEAVRLGALH
                     GLKMI"
BASE COUNT          814 a          740 c          875 g          751 t
ORIGIN      
        1 ctgttgatct gcggcactga tccgtatgag accaagacca tcttgtttac ccaatggatt
       61 atgcaaggca ttcaaaatgg ccaaaaagcg atctttatga cgccacggcg caccgccggt
      121 gtggcttacg ctgaaaagaa cggcggtctg tggctcgacg taaatccagg cactgatctg
      181 ctcgtggtta atgccatcgc tcgcatcatt gctgagaatg attggcagga taaggagtgg
      241 atcaaaaact gggtcaacaa taagtggggc tcatcctcgg gctttggcca gggcacgcgt
      301 aacacaccgt ggcaatggcg gacgacctgg ggcaagttcc agactaatgg ctatgaagat
      361 tggaaaaaat ggctgcttaa acaagacgag tttaaactcg tcaatgcggc taaagtttcc
      421 ggtgttaatg ccaagaaaat ccgtcaagct gccgaatgga tggcaaaacc gaaaggcaat
      481 aaacggccaa aaacctcgat catgatcgag aaaggtttct actggtccaa taataccggt
      541 aatactcagg cgatttccgc cctgggtatt attgttggtg ccggtggccg tccgggtcag
      601 attattggcc gggcgggtgg tcaccagcgt ggtggccagc gtggcggtaa atatccgcgc
      661 aacaagtcgc caatgaaggt gccgggccgt cgtcgtcgcg cgcttgatac ggatacctac
      721 accatgtcgg gtcacacccg tttggctcat gttattggta cgacatggat ccaatcaatg
      781 tgtggttccc agcaattggc taaacggttc catgaattga ccctcgccaa tccgaatcaa
      841 gttcgttctt acgacaaaca ggatattatc gataccctga aaaagcgggc tgattcaggt
      901 ggtatggtgg tgatcaacca ggaaatttat ctggttgatc caatcggtaa ccgttttgcc
      961 gatgtcatct tcccagctgc aacttggggc gaagaagact tcatgcgggc caatggcgag
     1021 cgtcgcctgc ggctgtatca gaagttctac gatgcccccg gcgaagcgaa accggattgg
     1081 tggattattg ctcaactctc caaacggatg ggctttgaag gctttgattg gaaaaactcc
     1141 aatgaggttg ccgaggaaat gtcacgcttc tcgcggggca gtcgcaaaga cttccatcag
     1201 atcaaggtgg tcgccaaacg tgaaggcaaa accttgcatc agaaaatgcg cgagtttggc
     1261 actaatggta tccaagggcc tgtcttctta actgaagaag gtaagctggt aggcaccaag
     1321 cgcctgcacg ataccacgcg taaattaagc gcaaccggtc ctgaggccag caatgtgttc
     1381 aacaagaagt tgacccattt caacagccag accggtaagt gtaatattca gaaatcgcca
     1441 tggtcactgt actcggatta ttgggaatgg atgaaacctc gtggcgacga aatgtggtgc
     1501 tcgtcgggac ggaccaacga gcgttggcag tccggctttg atgatcgccg gcggccctat
     1561 attgttcagc ggtggcccgg taactatgtc gaaatcagcc ctgaagatgc caagaaacgc
     1621 ggcatagaat cgggtgatat ggtgatggtc tattctgacc gggtgccgag tctcaaagag
     1681 acgatacttg gcattgaagg ctctgattac tctttcgctg gtcagatgaa agccggcaat
     1741 atcgagttga cccgtgccgc cgttaccggt gttgcaatgg tcacgcgcca catcaagaaa
     1801 ggcatgctct atatggactt cctgcatacg caacaaccgg cgaatgcttt ggaaggccgg
     1861 atcgttgatt ggattagtgg taactataat ttcaaaatgg gcaccgctaa agtcaagaag
     1921 atcggcgttt caccatataa gaaaactttc cggacgatgt catttgcacc acgggatatc
     1981 atctgaagat gactttgtta aatgcggagg aaatattgcc tttgcctgga cggccggcga
     2041 atagtattaa ttcaccggct ggccatggtt cgatccaaga ggaagatatt caacgaattt
     2101 atttatccga tgtcgtcgat gttttagcag cacttttgcg tgacggcgtc gatgttcatc
     2161 gctgtggagc agcgcgggca cttggagaga ttaaatctga ccaagccacc gaggtactgc
     2221 tcgaagcttt actcgatgaa gatgaagatg tgcgtaccga cgccgccgaa gcattagctg
     2281 taattggcga tcagcgcgca tcgaaacagc tgcttaaaaa cctcattggc gatccctgca
     2341 gtgatgtgaa aatggccgcc ctcaatgcgt tgaccaaaat gaaggtggcc gaggtgatcc
     2401 cctggcttaa acgcttgttg agctggcacg atgcggagat tatctgggac gaagacgaat
     2461 tttatgaagg tggctgggac agctgggttg atttgcaaat tgcggcgatc aaggcactgg
     2521 ctgaattcgg tgtcgaggat gccgttcccg aaattgttac agctatcaat gacgaagatg
     2581 cgcaagacct gagcgagttt gctttttcag cctttgcccg gatgggtgcc gccggcgctg
     2641 gtgccttggt tggctatttg gatgacaaag attcccgcca ccgccgccgt gccgctgtcg
     2701 tattggctgg aatcgatcat gacgcagcgc gtaaagctgt actccatggg ctgaaagatc
     2761 catcaaaaga tgttcgcctg gccatcgctg gggctctaaa cacaaatagt ttcaacgacc
     2821 agatttgcga aatattgctt gctgatcaag aaccggaact ccgcgccatc gccatattgc
     2881 atgtcgatga catcaatgta gaacagttga tttcgtggct ggaagatccc gccggtgaag
     2941 ttcaaatagc cgtctttaag cggctaatgg cgatgccaaa tattaaagtt gatgctgatc
     3001 tggttggtaa acttcaggct aaaattgccg aggataatcc agcggcagcc gctattgcat
     3061 tggaagcata taccacttta tttggtgaaa ctgccagcga cacgctgctg gagattctgg
     3121 cagatcaaga tcaaccggaa gcagtgcggc ttggcgcttt gcacgggctc aaaatgatcg
//
LOCUS       DASCNL010000066         3052 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000175857, whole genome shotgun sequence.
ACCESSION   DASCNL010000066 DASCNL010000000
VERSION     DASCNL010000066.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3052)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3052)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000175857"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="QF359_00830"
     CDS             <1..195
                     /locus_tag="QF359_00830"
                     /inference="COORDINATES: protein motif:HMM:NF019498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO85484.1"
                     /translation="LRSHEGEEFIYVLSGKVVIHTEFYVPTILEEGDSMYFDSNMGHA
                     YTVTNDEGAQILVTTAVDNE"
     gene            207..638
                     /locus_tag="QF359_00835"
     CDS             207..638
                     /locus_tag="QF359_00835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85485.1"
                     /translation="MADDGHADIVSVRVDCAADIALDYLSDPGTLDKWALGMGETEVL
                     GPNLVKGSYSGDGSDIYTLIEKQENFGAIYYFLGNQPDQLTPRIMIRVVAGEDLDAPV
                     DSCVVSMIAWRLDSMDDTRWQDLVSHHEEEILLIKDLIEAR"
     gene            complement(944..2611)
                     /locus_tag="QF359_00840"
     CDS             complement(944..2611)
                     /locus_tag="QF359_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85486.1"
                     /translation="MEQRLHFPRILCHTSLMKKYIRSALVGMAAIVCLTVTSFHLAAA
                     AGDPRPSLKDFLSVSTVNELVARVGLLFVRYVIDLTYQDTTYDPYTNRSTVSGVVVRP
                     TLPWDHGRHCQIMAARLSVSGAELGDWDRLTSRLELIGVTAPLACLPPEAVGAAAVME
                     ITNISADRVFVDIDYRMSSSAMRVNVHMTLPDLAAVTANLNFAYVAIHEEGDEPVILE
                     LRHAAVTLDDMGLWKKTKKSMPPEMTQPDTAALMVARGLTELFIDMNQPPAPNKRPQL
                     DLAQAAFVQSAAAQVQRFVAKPGTFVIETALEQPVRLNERTFDDPNRLFTVLKPVVAS
                     RPASRQQIVPTSMLKAALTAPNTLSDRDKLRVGQALVSGVGAPRALTEGQALLKLLAD
                     AGNGEAALALSTSLRSVDPEAAYRLALNAGANSMAGASGIMDRLEQDLTTRKILTLQA
                     RRLSAASTMPSPQDFVPLTQVRAYALAHLSGNSAVRSYVRAYYWALLGKAAGDQAAAS
                     MMAEIEARMRHRGPKAAAAWQAVAEKIRTDALAHWLAADYPTKLARQ"
     gene            2833..>3052
                     /locus_tag="QF359_00845"
     CDS             2833..>3052
                     /locus_tag="QF359_00845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HJO85487.1"
                     /translation="MSNSVTSISPKIRGILLMLSGTLFLTAMVALVRYLSTDLHPFVI
                     AFFRNLMGLGMLLPLLLRDGLGSLKTNNM"
BASE COUNT          678 a          806 c          850 g          718 t
ORIGIN      
        1 ctcaggtctc atgaggggga agagttcata tacgtgctgt cgggtaaggt tgtcatccat
       61 acggaattct atgttccgac aatattggaa gaaggggaca gtatgtattt tgacagcaat
      121 atgggacacg cctatacggt caccaacgat gaaggcgccc aaattttggt gacgacggcc
      181 gttgacaatg aataaaggaa accaatttgg cagatgatgg tcatgctgat atcgtatcgg
      241 tgagagttga ttgtgcggcg gatatcgcgc tggattattt atcggatccc ggtacattgg
      301 acaaatgggc tctcggaatg ggagagacag aggttcttgg accgaacctg gtcaagggca
      361 gctactcagg tgatggctca gatatataca ccctgatcga aaaacaggaa aattttggag
      421 cgatctatta tttcctcggc aatcaaccgg accaattaac accacgtatc atgatacgcg
      481 ttgtcgccgg tgaggattta gacgcacctg tggatagctg tgtcgtttcc atgatcgcct
      541 ggcgactgga cagtatggac gatacccgtt ggcaagatct tgtgtctcat catgaagaag
      601 aaatactctt aatcaaagat ttgattgaag cgagatagaa aaattttgtc tgtttttttt
      661 attattatcg gcggtttttg acggataatt ctttaatctt ttctctcctt tcaatgatgg
      721 cggtgtgccg cccgaaacca gatgatttga gcaaaacccg gtccaagccc cgatctgggg
      781 gacctcgatt gccggtcaaa gcggcccgac cgggggttag cgcaatttgg ctattaaaac
      841 atgcgcccgg gcctctgggc cgtggtgctc tgtcactagg cgattcggtg tcgtatcatc
      901 tgagttgccc aagcggaagg tggttggctc aagccatcca tttctattgc ctcgcgagct
      961 tcgtcggata gtccgccgcc aaccagtgtg cgagtgcatc agttcggatc ttttccgcga
     1021 cggcttgcca ggcagcggcc gctttcggtc cgcggtggcg catacgggct tcaatttctg
     1081 ccatcatgct agcggcggcc tggtcacccg cggctttgcc cagcaatgcc caatagtaag
     1141 ccctcacgta gctgcggact gcgctattgc cactcaaatg ggccagggca tatgcccgca
     1201 cctgggtcaa cggtacgaaa tcctgcggac taggcatggt tgacgctgcg gaaaggcgtc
     1261 tggcctggag ggtcaatatt ttccgcgtcg tcaagtcctg ctccagccgg tccataatgc
     1321 cggatgcgcc agccatgctg tttgccccgg cgttgagtgc gaggcggtag gcggcttccg
     1381 gatcaactga acgcagggag gtagacagcg ccaacgcagc ctctccattg cccgcatcgg
     1441 ccagcagctt cagcagtgcc tgcccttccg tgagcgcccg cggtgcgcct acaccggaga
     1501 ccagcgcttg tcccaccctc aacttgtccc gatcggacag agtgtttggt gccgtcagcg
     1561 cggccttcag catgctggtc ggcacgatct gttggcgtga ggctgggcgg ctcgccacca
     1621 ccggctttag cactgtgaac agccggttgg gatcgtcaaa cgtccgttca ttaaggcgga
     1681 ccggctgctc cagcgccgtc tcgatcacaa aagttcccgg cttggcaacg aaccgctgaa
     1741 cctgtgcggc tgccgactgc acaaatgccg cctgtgccaa atcgagttgc ggccgtttgt
     1801 taggcgcggg gggctggttc atgtcgatga atagctcggt caagcctcgg gccaccatca
     1861 gtgcggcggt gtccggctgg gtcatctcgg gcggcatgga tttcttggtt tttttccaca
     1921 accccatatc gtccaatgtg accgcagcgt gccgcagttc cagaattacc ggctcatccc
     1981 cttcttcgtg tatggcgaca taggcaaaat tcaggttggc agtgacagca gcaaggtccg
     2041 gtagggtcat gtggacatta actcgcatgg cggaggagct catacgatag tcaatatcga
     2101 caaacactcg gtctgccgag atgttagtta tttccattac tgccgccgct cctaccgctt
     2161 ccggaggcag gcaagcgagt ggcgcggtca cgccaataag ttccagccgc gaggtaagcc
     2221 ggtcccaatc gcccaattcg gcaccggaaa cagaaagacg cgcggccata atttgacaat
     2281 ggcggccatg gtcccacggc agtgttggcc ggacaacaac tccgctgact gtcgagcgat
     2341 tggtgtaagg atcgtaggtg gtgtcctgat aggtcaggtc aatcacgtag cgcacaaata
     2401 aaaggccaac acgggctacc aattcgttga cggtgctgac gctcagaaaa tcctttaggg
     2461 acggcctggg atcccccgca gcagcggcca gatggaacga tgtcacggtc aggcaaacaa
     2521 tcgctgccat acccaccagg gcggaacgga tatatttctt cataagagaa gtgtgacaga
     2581 gaatgcgggg gaagtggagt ctttgttcca aacccagccc aaaccttaat cccagaaacc
     2641 gccccggtcg agcctcacta cccgaccaac cgtcgaccta attcggctac cgaaacgggc
     2701 acccgggccc ctaggtactg ccgtttggtg gtgcttcagc aacgagtacg ttctagacta
     2761 atcgggatca gttcaaaagg gaccaaacta cgcagtgctt gacgtaagat tactttgaac
     2821 cattgatggt acatgagcaa ttccgtcacc agtatttcgc caaaaatccg tggcattctg
     2881 ttaatgcttt ccggcacact gtttctcact gcaatggttg cattagttcg gtacctttcg
     2941 actgatttgc atccatttgt gattgcattt ttcagaaatc tgatgggctt ggggatgctt
     3001 ttgccacttt tacttcgcga tggcctgggt tccttaaaga cgaataatat gg
//
LOCUS       DASCNL010000067         1906 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000184013, whole genome shotgun sequence.
ACCESSION   DASCNL010000067 DASCNL010000000
VERSION     DASCNL010000067.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000184013"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(42..1757)
                     /locus_tag="QF359_00850"
     CDS             complement(42..1757)
                     /locus_tag="QF359_00850"
                     /inference="COORDINATES: protein motif:HMM:NF014794.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO85488.1"
                     /translation="MQERTYTFAMKSSIPLMDPRYDMGRMVELTEHCFELSEASNMPV
                     FLNMRIRACHLTGSFIAKDNKIAEFNANNPIPEQVYDVTKIVLPPASYQHEIAKFDER
                     LPAAANYAHKNNINEVFPGAGGCLGIITQGGTYTVVMRALQRLGAADAFGNSDIPVYC
                     MNMVYPLVTDEIVDFLNNKDSVLVVEEGNPNYIETQIAEIAHRRQLDCRVHGKDMLPM
                     AGEYVSNVVREGIAQYLVEEGPAYISQNALTKNSEIQAKTQQAQSYLPGPMPPRPPSF
                     CTGCPERPIMTALKLLMKERGKFHISMDIGCNLFGSLPPFNVGNTVLGYGLSLASSGA
                     IGPALGQPNVAVMGDGGFWHNGFTSGVINTRWNQYDSVLIILDNGYAAATGQHKIPST
                     GATPRGMASLLSIEEALKGVGVKWIKHVNSYSMEATIDVLREAMDARDEGLRVVISNN
                     ECMLARQRREKPAKAAALKVGRRVIKDKFGVDEEVCTGDHSCMRLSGCPSLTLKQSAD
                     PLKATPVAHVDETCVACGNCGEVAHAAQLCPSFYKAEAIQNAGALRQFGSAINRTLLS
                     LMGAR"
BASE COUNT          443 a          487 c          513 g          463 t
ORIGIN      
        1 gattggccga tcaattgtcg aggtggttct tatctcgttc attatctcgc ccccatcagt
       61 gaaaggaggg tgcggttgat ggctgagcca aattggcgga gcgcacctgc attctggatg
      121 gcctctgctt tatagaaaga cgggcaaagc tgtgccgcat gagcaacctc gccgcaattg
      181 ccgcaggcga cacaggtttc gtcaacatga gcaaccggtg ttgccttcaa agggtctgca
      241 ctttgtttca aagtgaggga cgggcagccg ctcaatcgca tgcaggagtg atcgccggtg
      301 catacttcct catcaacacc gaatttatcc ttgatgaccc tccgaccgac tttgagggcc
      361 gcggctttag ccggtttttc ccggcgttgg cgtgccagca tgcattcatt gttggagatg
      421 acgacgcgta agccttcgtc ccgcgcatcc atggcctcac gaagcacatc gatcgttgcc
      481 tccatgctgt aggaattgac gtgcttgatc catttgacgc caacaccttt gagagcctct
      541 tcaatcgaca gcagcgatgc catgccacgt ggcgtagcgc cggtagatgg tattttatgc
      601 tggccggttg cggcagcgta gccattatct aaaattatca gaactgaatc atattggttc
      661 cagcgtgtat tgatgacacc ggaggtaaag ccgttatgcc agaaaccacc gtcacccatc
      721 accgcgacat ttggctgacc aagcgccgga ccaatcgcgc cgctactggc gaggctgagg
      781 ccatagccca aaaccgtatt gccgacattg aaggggggca aggagccaaa tagattgcaa
      841 ccgatatcca tcgaaatatg aaatttgccg cgttccttca tcagtaattt taacgccgtc
      901 attatcggtc gttcggggca tccagtgcag aaagatggcg ggcgcggcgg catcggaccc
      961 ggcagatatg attgagcctg ctgggtcttg gcctgaattt cggaattttt ggtgagggcg
     1021 ttctggctga tgtatgccgg gccttcctcg acgagatatt gcgcgatgcc ttcccgcaca
     1081 acattggata catattcacc tgccatcggc agcatatctt tgccgtggac gcggcaatcg
     1141 agttgtctgc ggtgggcgat ttcggcgatc tgagtttcga tgtaattcgg attgccttct
     1201 tcgacgacca gaacactgtc tttgttgttc aaaaagtcaa cgatttcatc tgttaccagg
     1261 ggatagacca tattcatgca atagactgga atatcagaat tgccgaaagc gtcggcagcg
     1321 cccaaacgct ggagtgcccg catcaccacg gtgtaagtgc caccctgggt aatgatgccc
     1381 aaacaaccac ctgcacctgg gaagacttca ttgatattat ttttgtgtgc ataattagct
     1441 gccgcgggga gacgctcgtc aaacttagcg atttcatgct ggtaagacgc cggcggcagc
     1501 acaattttgg taacgtcgta tacctgttca ggtattggat tgttggcatt gaactcggca
     1561 atcttgttat ctttggcgat aaagctgccg gtcaaatgac aggctcgaat acgcatgttg
     1621 aggaataccg gcatgttgga cgcttcagat aactcaaaac aatgctcagt cagctcaacc
     1681 atgcgcccca tatcataacg cgggtccatc agtgggatcg aagatttcat ggcaaaggta
     1741 taggtgcgct cctgcatgat tgaggagcct tagccgtaat cgtcaccgag gataatcagt
     1801 gagccgcctt tgacgccagt tgaagccaaa tttgacagcg cgtccgaggc gacattggtg
     1861 ccgactacag atttccaggt cacggcgccg cgcaaaggat aatgga
//
LOCUS       DASCNL010000068         1410 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000185515, whole genome shotgun sequence.
ACCESSION   DASCNL010000068 DASCNL010000000
VERSION     DASCNL010000068.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1410)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000185515"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..343
                     /locus_tag="QF359_00855"
     CDS             <1..343
                     /locus_tag="QF359_00855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85489.1"
                     /translation="GDGGLLELWIGVTAVVIVLWALEIQGAVSSGDETAKRSINDLLA
                     GRLAIYFYGGTLVIGLVVPLILTTGTIAPLSANILAVIGLASIIGDFFMKYSSIKAGV
                     YLPVRLPHLHR"
     gene            386..1189
                     /locus_tag="QF359_00860"
     CDS             386..1189
                     /locus_tag="QF359_00860"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HJO85490.1"
                     /translation="MNKETPKTDRSDPESEEPKKGFGVQSVEVGMHLLKVLMEFGRPA
                     MLKELAEAADMSAQKAHRYLVSLQRSGMVEQDVAGGRYGLGEFALNVGLTALSQLNIV
                     RIAGDAVAELRNRTDQSCLLAVWGSHGPTIVRMSEGSRPLVTTARVGVVLSMVNSATG
                     RVFAAFLPKDTADEFLAPELPLEDRESYNALLADVRIRGISRTEGEEQATINALAAPL
                     FDHFGNIAGALTLLGQEKHFNVDWDGPLTRELLAVSKSVSNRLGYNANG"
     gene            1277..>1410
                     /locus_tag="QF359_00865"
     CDS             1277..>1410
                     /locus_tag="QF359_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HJO85491.1"
                     /translation="MLHRLYDWTLGLAAHKHAILALALISLVESSVFPIPPDILLIPM
                     V"
BASE COUNT          306 a          342 c          396 g          366 t
ORIGIN      
        1 tggcgacggt ggcttactgg aattatggat cggtgtgaca gccgtggtga ttgtgctttg
       61 ggcgttggaa atccaaggcg ctgtttcaag tggtgatgaa accgccaaac gctcgatcaa
      121 tgatttgctg gccggtcggt tggcgatcta tttttacggt ggcacgctgg tgatcgggct
      181 tgtggtgccg cttattctga ccaccggtac aatcgcaccg ctatcggcga acattttggc
      241 agtaattggc ttggcttcca ttatcggtga tttttttatg aaatactcgt cgattaaggc
      301 cggcgtctat ctgccggtcc gcttgcctca tttgcatcgg taataaattg gtgacgggtt
      361 aaccaatctt gcttgataga tgaagatgaa taaggaaaca ccaaaaacag atagatctga
      421 tccggaaagt gaagagccga agaaaggctt cggggtacag tcggtcgagg tcggtatgca
      481 cctccttaaa gtgctgatgg aatttggtcg cccggctatg ctcaaagaat tggctgaggc
      541 tgccgatatg tcggcgcaaa aagcccaccg ctatctggtc agtttgcaac gcagtggtat
      601 ggtcgaacag gatgtagcgg gcgggcgtta cggtctcggt gaatttgccc tcaatgttgg
      661 actgacggcg ctgtctcagc taaatatcgt ccgcatcgcc ggtgacgccg ttgccgaact
      721 gcgtaaccgc actgatcaat cttgtctatt ggccgtctgg ggcagtcatg gaccgaccat
      781 cgtacgcatg tccgaaggtt ctaggccttt ggtaacgacg gccagggtcg gcgtcgtcct
      841 gtccatggtc aattcagcaa ccggccgggt gttcgcggca tttttgccaa aggacacggc
      901 cgatgaattc ctggcgcccg aactgccgct agaagaccgg gaaagctata atgcgctttt
      961 ggctgatgtc cggattcgcg gcatttcccg gaccgaaggc gaagaacagg caaccatcaa
     1021 tgccctggct gccccgttgt ttgatcattt tggcaatatc gctggcgctt taaccttgct
     1081 tggtcaggaa aagcatttca atgtcgattg ggacggcccg cttacccgcg agcttctggc
     1141 cgtttctaaa tctgtctcca accggctcgg ctataacgca aacgggtaaa atcttatcgt
     1201 catcggacgt aatgcaagtt tgccattgcc gcccgaaccc gatagtaacg ggacggtttt
     1261 ggagaataat aaattcatgc tgcaccgtct ttacgattgg acgttaggct tagctgcgca
     1321 caaacacgct atcctagcgt tggcgctgat atcgctggtg gaaagctcgg tttttccgat
     1381 tccaccagat attttattga tcccgatggt
//
LOCUS       DASCNL010000069         1469 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000186187, whole genome shotgun sequence.
ACCESSION   DASCNL010000069 DASCNL010000000
VERSION     DASCNL010000069.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1469)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1469)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000186187"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1469
                     /locus_tag="QF359_00870"
     CDS             <1..>1469
                     /locus_tag="QF359_00870"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85492.1"
                     /translation="FGSSNYITESSCCFGATFVAAELTYGTDYNHFFQAGRFKQPETK
                     CRVIWSNNPSESLIPYERHHLITEASKVPTIVVEPRRTMLAESATIHLQLRPGTDGAL
                     ALGIAHILIKKGLDDTEFLNQYAEGYDAYKTYVEDFTPERTSEITGVPAELIIKAAKL
                     YGTSKPAQLAVSQEALVQNSNGLQNHRAVILLAALTGNIDIAGGNRPFDHRLKGKSVA
                     LPEGMNRPAENPMGSEKFPLFEEIYNEGQAMLLADYIEQGKIKAVVSFGTNLMMWPNS
                     NRLATALQKLEVFSTSDFFTNPTVNVATVFLPAATHLERQSLVMALNGRVQYRPAAVA
                     PRGQAHGDTEMMFKLADALGLHNQFWGGDISASYEERLSSTELSFADLPKNGKSISLK
                     LLDIPEKNFQKVGFKTPSGKVEFDSSRLRSEGHDGLPIYREPHWSPASSPEIAKDYPM
                     VLSTGIRSKTYSHSQGRELAMLREREPDPRAQIHPDDAA"
BASE COUNT          394 a          356 c          352 g          367 t
ORIGIN      
        1 cctttggttc gtccaattat ataactgaat ccagttgttg ttttggcgcg accttcgtcg
       61 ccgccgaatt aacctatggc actgattaca accacttttt tcaagccggg cggtttaagc
      121 aaccagaaac caaatgccga gtcatttggt ctaacaatcc atctgaaagt ttaattccct
      181 atgagcggca ccatctaata accgaagcta gcaaggtacc gacaattgtc gttgaaccgc
      241 gccggacgat gcttgctgaa agtgcaacga tccatttgca gctccgaccc ggaactgatg
      301 gtgcgttggc tcttggaatc gctcatatcc tcatcaagaa ggggttggac gataccgagt
      361 ttcttaacca atatgcggaa ggctatgatg cttacaaaac ctatgtcgaa gattttactc
      421 ctgaacgtac gagtgaaatc actggtgttc ccgcagaact aatcatcaaa gccgccaaat
      481 tgtacggcac ctcaaaaccg gctcagttgg cggtttctca ggaggccttg gtgcagaatt
      541 ctaacgggct acaaaaccac cgtgcggtta tattgctggc tgcattgacg ggtaatattg
      601 acattgctgg cggtaatcgg ccttttgacc atcgacttaa aggcaaaagc gttgccctac
      661 cagaagggat gaaccgaccg gcagaaaacc cgatgggcag cgaaaaattt ccattgtttg
      721 aggaaatata taatgaaggc caagctatgc tgttagccga ttatattgaa caaggaaaaa
      781 ttaaggccgt agtgtccttt ggcaccaatt tgatgatgtg gcccaattcc aaccgtctcg
      841 ccacggcctt acagaaactt gaagtttttt caacaagtga ttttttcacc aacccgacgg
      901 ttaatgttgc caccgtattt ttgcccgccg ctacccatct tgagcggcaa tctttggtca
      961 tggcgcttaa cggccgggtt caatatcgcc cagcagcggt ggcgccccgc ggccaagctc
     1021 atggtgatac cgaaatgatg tttaagctgg ccgatgctct cggtctacat aatcaatttt
     1081 ggggcggcga cataagcgca agctatgaag aacggctaag ctcaacggaa ctctctttcg
     1141 ctgatctgcc aaagaacggc aagagtatca gtctaaaatt attagatatt ccggagaaaa
     1201 atttccagaa agttggtttt aaaacgccga gtggaaaggt ggaatttgat agttcacggt
     1261 tgcgctcaga gggccatgat ggattgccga tttatcgtga acctcattgg tcaccggcga
     1321 gctctccaga aattgccaaa gactatccga tggtgctttc gactggcata cggtccaaga
     1381 cctattctca ttcccaaggc cgcgaattgg cgatgttgag agagcgagaa ccagatccac
     1441 gagcgcaaat tcatcccgat gacgcagct
//
LOCUS       DASCNL010000070         1006 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000187012, whole genome shotgun sequence.
ACCESSION   DASCNL010000070 DASCNL010000000
VERSION     DASCNL010000070.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000187012"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(109..576)
                     /locus_tag="QF359_00875"
     CDS             complement(109..576)
                     /locus_tag="QF359_00875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO85493.1"
                     /translation="MTTVSMTVNGEAVSADAQPDTLLSEFIRETLSLTGTHVGCDTSQ
                     CGSCVVLVDGHSAKSCTMLAVQAEGTEVTTVEGLATNGELHPMQKAFHENHALQCGFC
                     TPGMMISAIDLVTKNPDADETAIRKGLEGNICRCTGYHNIVKAVQAAAAEMKG"
BASE COUNT          252 a          241 c          231 g          282 t
ORIGIN      
        1 ggccgattga tatcgtcggt gtaattgcct ttgccggtga taaagcgccg gtcttccttg
       61 cgaaggactg acgcgccaat acctgtgttg tttccatctg gcatgatctt atcctttcat
      121 ttccgcagcg gccgcttgca cggctttgac aatgttatgg taaccggtgc accggcagat
      181 attaccttca aggcctttcc ggatcgctgt ttcatcggca tctggatttt tagtaactag
      241 atcgattgca ctgatcatca tacccggcgt acagaatcca cattgcaaag catggttttc
      301 atgaaatgct ttttgcatcg gatggagttc gccgttggtc gccagaccct caactgtcgt
      361 cacctcagtg ccttcagcct gaaccgccaa catggtgcag cttttagccg aatgaccgtc
      421 taccaaaacg acgcaagagc cgcattggct ggtgtcacag ccgacatgcg tgccggttaa
      481 actaagagtt tctctaataa attccgaaag aagagtgtcc ggctgggcat cggctgaaac
      541 agcctcgccg ttcaccgtca ttgatacggt tgtcatgttg cctcccaagt tgtgcggcct
      601 tttacccttt tatatctggg cctgttggcc gttgttagta tctggtccta gggcgaatag
      661 tgtgcgcagt taggaaatta aatcaacagg tttttacaat tagtttaaga aaaagcgccc
      721 aataaaataa taatagcagg atagccgaga gcttttcagc tagaccttag tcaaaatgta
      781 aagtgggaac attttgaaac tatcggcgat tatctttaac cgtcttcact aaagaagaat
      841 cccggtgttt tcatattctg tctcattcat aactcctatc tcgttacgat gagccagaaa
      901 ctctctctta tcaaacacta caagctagtg ccataggcgc tgacggggga caattaggtg
      961 agccatatag atatgtgcca agcgatacag atagtgctga aaatcc
//
LOCUS       DASCNL010000071         3714 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000187567, whole genome shotgun sequence.
ACCESSION   DASCNL010000071 DASCNL010000000
VERSION     DASCNL010000071.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000187567"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..892)
                     /locus_tag="QF359_00880"
     CDS             complement(<1..892)
                     /locus_tag="QF359_00880"
                     /inference="COORDINATES: protein motif:HMM:NF012880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HJO85494.1"
                     /translation="MTDNLTPDQNSAILDRMLLIRRFEEMLIDLAGDHNFGHYHLYIG
                     EEATGATVVESLTKTDLLLTTWRNHGHLLARGGDPGRMVAEILGRVDGYNKGRGGTLH
                     LTVRDVGFLSTSGLVGGAVGLASGAGFTLKQAGEGNICVVFFGDGAMEEGVVFEAMNL
                     ASLWSLPVLFVCENNNSGAISTQEGGFPSSEIAASRIGDIPKSLNIKSELVDGADVAA
                     VHAVIAEAVGGMRKGSGPAFIETYTERWPGSRPLWPTQATGVTQLAAAWDPSLITGVY
                     ADWIDEYDPLLRFIRNQLDAG"
     gene            complement(907..1914)
                     /locus_tag="QF359_00885"
     CDS             complement(907..1914)
                     /locus_tag="QF359_00885"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HJO85495.1"
                     /translation="MPPDSQQTDRNLTLKDAVLEAMFEEMESDQNVILIGEDVGTAGG
                     VFKQTKGLFKTFGADRVIDTPISESAIFGLAVGAAMAGSRPIIEVMFGDFLTLVMDQL
                     VNQAAKVHYMSAGGFNVPLVLRTGIGVGGNLGPQHSQSLHGWLAHIPGLKVVMPSSAS
                     DAKGLFKAAVRDNNPVIFMEDRMTYNLKEQVPEDEHVIPLGSAEVKREGADVSIYAVT
                     RSVHTALAAAEHLQVKNVSAEVVDLRTLAPLDVETIVASVQKTGRALVLDGGYQSFGI
                     TSEIAATIGELAFYYLDAPVMRLAAPDVPVPFSPALETMTVPNAEQVVAKVTEMYGGL
                     G"
     gene            complement(1904..2863)
                     /locus_tag="QF359_00890"
     CDS             complement(1904..2863)
                     /locus_tag="QF359_00890"
                     /inference="COORDINATES: protein motif:HMM:NF012880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO85496.1"
                     /translation="MLTKDKLLELYRGMVTIRAFEEEVRKMHNAGLAPGLVHLYSGQE
                     AVAVGTCTALNSDDYIASHHRGHGHCIAKGSELDRLFAEIIGRRSGYGMGRGGSMHIY
                     DPATFNLGTNGIVGGSVPLATGAALLAKLRGTGQVAVSFFGDGVLNQGILFESLNMAA
                     LWSLPVVFICENNGYGEFTEIDDVTAGRPYAKRGEAFDIPSEKADGMDVLAVHETVSK
                     AVTRARNGDGPSFLIFDTYRYSGHHVGDKQEYKDDEERELWLSRDPIPKLSEMLVAGK
                     KIKQAELDELDAEIKATVIAAANQAKKMPEPDADDLTRHIYAA"
     gene            complement(2877..>3714)
                     /locus_tag="QF359_00895"
     CDS             complement(2877..>3714)
                     /locus_tag="QF359_00895"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO85497.1"
                     /translation="DPALADYHNAGTMRAIDIKAPLGSVVNCEYPATVGASPVNMGNQ
                     IMEAVLDALSKARPDRAIAAWGKHRGDYTFGVDPRTNERYVRTSFDYDGSAGAVWGYD
                     GYQGVTSLTAMGAINRGDMEEMEARLPWRILKYEMVEDFTGEGRWRGGPGIHWEAVNE
                     GSDGQMATGSSDGDVVQGFGAQGGNPSPVCRTYIDRGDERIRVKPHRMVEVKEGDIII
                     KQSSGGGGVGDPTERDPEMVLEDVINELVSIKAAREIYKVDIDPKTQTINEDETSKLR
                     AA"
BASE COUNT          862 a         1077 c          908 g          867 t
ORIGIN      
        1 gtccggcatc gagctggttt cggataaagc ggagaagggg gtcatactca tctatccaat
       61 ctgcatatac gccggtgatg agggatgggt cccaagccgc tgctagttgc gtgacgccgg
      121 tcgcttgcgt tggccacaac gggcgcgaac ccggccagcg ctcggtatag gtttcaataa
      181 atgccgggcc gctgcctttt ctcataccac cgacagcctc ggcaatgacc gcgtgtactg
      241 ctgcgacatc ggcaccgtcg acgagctcgg acttaatatt gagcgatttt ggaatatcgc
      301 cgatccggct ggcggcgatc tcggaggacg gaaagccgcc ttcctgagta ctgatcgcgc
      361 ctgaattatt attttcacag acgaataaaa cgggcaggga ccagagcgag gcgagattca
      421 tcgcttcgaa caccacccct tcctccatcg cgccatcgcc aaaaaaaacg acacaaatat
      481 tgccctcacc ggcttgtttc aaagtaaagc cggcacctga agccaagccg accgcaccgc
      541 cgactaaacc ggaggtcgag agaaagccaa catcccgaac cgtcagatga agcgtgccgc
      601 cgcggccttt attgtaacca tcgacgcggc caagaatttc agcgaccatg cgacctggat
      661 cgccgccgcg tgccaataaa tgcccatgat tgcgccaggt tgtcagcaac aggtcagtct
      721 ttgttaaaga ttcaacaacg gtcgcgccgg tcgcttcctc accaatatag agatggtagt
      781 ggccaaaatt atgatcaccg gcgagatcaa tcagcatttc ctcaaaccgg cggatcagca
      841 gcatgcggtc aagaatggcc gaattttgat ctggtgtaag gttatctgtc attttcccat
      901 ctccatttaa cccaaaccac catacatctc ggtcaccttg gcgaccactt gttcggcatt
      961 tggcacggtc atggtttcca gcgcagggct aaaaggtacc ggcacatcag gtgccgcgag
     1021 ccgcataacc ggtgcgtcaa gataatagaa agcaagctca ccaatagtag ccgcaatttc
     1081 gctggtaatg ccaaaagatt ggtagccgcc atccagcact aaggcccgac cggtcttctg
     1141 aaccgaggcg acaatagttt cgacatcgag cggcgctagg gtgcgaagat caaccacttc
     1201 ggcgctaaca tttttgactt gaaggtgctc ggcagccgcc agtgctgtat gtaccgatct
     1261 ggtaaccgcg tagatcgaaa cgtcggcacc ttcgcgtttt acttcagctg atcccagtgg
     1321 gatgacatgc tcatcttccg gcacctgctc tttcaaatta tacgtcatgc ggtcttccat
     1381 gaagatgacc ggattgttgt ccctgacagc tgctttaaat aatccctttg catcactggc
     1441 tgagcttggc atgacgactt ttaatcccgg aatatgggcc agccagccat gcaggctttg
     1501 cgaatgctgg ggtccaagat taccaccaac gccaataccg gttcgcaaaa ccagcggcac
     1561 attaaagcct cctgccgaca tgtaatgaac tttggccgcc tgattgacta attgatccat
     1621 caccagtgtg agaaaatcac caaacattac ttcgatgatt ggccgtgagc ctgccatcgc
     1681 tgccccaacg gcaagcccga agatggcgga ttccgagatt ggcgtatcta tgacgcgatc
     1741 tgcaccgaaa gttttaaata atcctttggt ttgtttaaac acgccacccg ccgtaccgac
     1801 atcttcaccg atcaagatga cattttgatc gctttccatt tcttcgaaca tcgcctcaag
     1861 tacggcgtct ttgagcgtga ggtttcgatc cgtttgttga gagtcaggcg gcatagatat
     1921 gcctcgttaa atcatcggcg tccggctctg gcatcttttt ggcctgattg gcagcggcaa
     1981 taaccgtcgc tttaatttcg gcatcaagct cgtcaagttc tgcttgtttg atctttttcc
     2041 cggcgaccaa catttcggac aattttggaa ttggatcgcg ggacaaccac agctcgcgtt
     2101 cttcatcgtc tttatattct tgtttatcac cgacatgatg gccagaatac cggtaggtat
     2161 cgaaaattag gaaactcggc ccgtcaccgt tgcgtgctcg ggtgacggct ttcgacactg
     2221 tttcatgaac cgctaagaca tccatgccgt cggctttttc agacgggata tcaaatgctt
     2281 caccgcgctt ggcatagggc cggccggcag tgacatcatc gatctcggta aactcgccat
     2341 agccgttatt ttcgcagatg aacactaccg gcagggacca cagcgctgcc atgttgagag
     2401 attcaaacaa gataccttga ttaagaacgc cgtcaccaaa aaagctaaca gccacctgac
     2461 cagtgccccg aagctttgct aatagcgctg ccccggtggc caagggcacg gaaccgccga
     2521 caataccatt ggtgcccaaa ttaaaggttg ccggatcata gatatgcatt gagccacccc
     2581 ggcccatgcc gtagccagaa cgccgcccga taatctcggc gaacaaacgg tcaagctcgc
     2641 ttcctttggc gatgcaatga ccgtggccac gatggtgact ggcaatatag tcgtctgagt
     2701 ttaatgccgt gcaggtgcca acagcgaccg cttcttgtcc ggaataaaga tgcaccagtc
     2761 cgggtgccaa accggcattg tgcattttac gcacttcttc ctcgaaggcg cgtatcgtta
     2821 ccatgccccg atagagctcg agcagtttgt ctttggtcag cacattagcc tccactctaa
     2881 gcagcgcgca gtttactggt ctcgtcttcg ttaatcgtct gcgtttttgg atcgatgtca
     2941 actttataaa tttcccgggc agccttgatg ctgaccagct cattaatgac atcttccagc
     3001 accatctcag gatcccgctc ggtcggatca ccaaccccac cgccgccgga ggattgcttg
     3061 atgataatat cgccttcttt aacttcgacc atgcgatgcg gtttaactct gatcctttca
     3121 tcgccacgat cgatataagt ccggcagact ggcgatgggt tgccgccctg ggcgccgaag
     3181 ccttggacta catcaccatc ggagctgcca gttgccattt gaccgtcgct gccttcatta
     3241 accgcttccc aatggatgcc tgggccaccg cgccagcgtc cttcaccggt aaaatcctca
     3301 accatttcgt atttgagaat ccgccacggc aaacgcgctt ccatttcttc catgtcgccc
     3361 cggttaatcg cacccatggc ggtcagtgag gttacaccct gataaccatc atagccccag
     3421 accgcaccgg cactgccgtc gtaatcaaac gaagtccgca cgtagcgctc gttggtgcgg
     3481 ggatcaacgc cgaaagtata atcaccccgg tgtttgcccc aagccgcaat cgcccggtcc
     3541 ggtcttgcct tggaaagcgc atccagcaca gcttccatga tctgattgcc catgtttacg
     3601 ggtgaggcgc caactgtcgc cgggtattcg cagttcacca ccgaacccaa aggcgccttg
     3661 atatcaattg cccgcatcgt gccggcattg tgataatcgg ccagcgccgg atca
//
LOCUS       DASCNL010000072         2453 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000189658, whole genome shotgun sequence.
ACCESSION   DASCNL010000072 DASCNL010000000
VERSION     DASCNL010000072.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000189658"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1985
                     /locus_tag="QF359_00900"
     CDS             <1..1985
                     /locus_tag="QF359_00900"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85498.1"
                     /translation="ARARGMKMVVVDPFANQAGANSTEWVPIRVGTDAGLALAMANVL
                     VNELEMYDVAYLKAKTNMPYLIGDDTRYIRDPETNKPMVWDSAISQACTFDATDSADM
                     AIEGTYMVDGKQCRPGFVLMKEHLKTYTVERGEEITTIPAENIRRIATEFAEEARIGS
                     TIVIDGVTVPYRPVAAIAFRGSQGHKNSTYNMLSVDLLNHLVGAADVAGGCLGFNPAC
                     DGYPETGRLKYIPHPDPDGLMITGSWMGPHGPYPIGDPAPPERVGLQNLFPMAMGSVF
                     QGSTDQEEMWEKFDFDYRPEFLLNLGANQIMSVGNSDAVEASLKKFKFIVSFDIFATE
                     TTEFADIVFPDCGYLETTDSRSNFPFIFSLPAGLGEWCWPIRQEVVEPEGERRLFADV
                     LQELGDRIGITPDLNAAYNAWFELEGENRLKPDRKYTFAEIGDHDLKDKFGPDKGLDY
                     FKEHGLVKWPKKPNEVYWRAFTDVRVPLYWEWMNDTWEKTMAIAEPKGLDIPKEYYSP
                     LPDWLPCPSHECDHEDFDFYAFYYRDIVHTNSLTMENAWLDEAAQLDPYSYNIAINGG
                     VGREKGLQSGDLISVENEHGHKVEGRARLTETIHPEGLGIGACAGHWARRMPTAKGKG
                     VFFNDLVELDWHHSSPSNLTVDLCAKVKVTKLEAAQ"
     gene            1982..>2453
                     /locus_tag="QF359_00905"
     CDS             1982..>2453
                     /locus_tag="QF359_00905"
                     /inference="COORDINATES: protein motif:HMM:NF024644.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO85499.1"
                     /translation="MRWGMVIDLKRCIGCYGCQLSCKAENGTPPGVFFARVHKQEEGQ
                     YPTAQTTFLPVLCNHCDDPPCVDVCPTGASFVWEDDGIVDIDADKCVGCRSCMMACPY
                     SQRFLNDDPQNYYGDQGATPYEQARVERHQTGVVMKCNFCRDRVRNGQDPACVEN"
BASE COUNT          587 a          594 c          662 g          610 t
ORIGIN      
        1 atgctcgtgc gcgcggtatg aaaatggtgg tggttgatcc tttcgccaat caggccggtg
       61 cgaattctac tgaatgggtg ccaatccgag ttggcacaga tgccggtttg gcgttggcaa
      121 tggccaatgt gttggtcaac gagctggaaa tgtatgacgt cgcttatctt aaagccaaaa
      181 ccaatatgcc gtatctgatt ggtgatgata cgcgttatat ccgtgaccca gaaaccaaca
      241 agccaatggt ttgggatagc gcaatcagtc aggcctgtac ttttgatgcg actgattcag
      301 ccgatatggc gattgaaggc acctatatgg ttgacggcaa acagtgccgc ccgggattcg
      361 tgctgatgaa agagcatttg aaaacttata cggttgagcg cggtgaggaa attaccacta
      421 tcccagctga aaacatccgc cggattgcca ccgaattcgc cgaagaagcg cgcattggca
      481 gcaccattgt gattgatggc gtgacggtgc catatcgtcc agtagccgcg attgccttcc
      541 gaggctcaca ggggcacaag aactcgacct ataatatgct gtcggttgat ctgttgaatc
      601 atttggtggg cgcggccgat gttgccggtg gctgcctcgg ctttaaccca gcctgtgatg
      661 gttatcctga aactgggcgt ttaaaatata ttccgcatcc cgatccggat ggcctgatga
      721 ttaccggctc ttggatgggc ccacatggac cgtatccaat tggcgatccg gcaccaccag
      781 aacgggtcgg tctgcagaat ttattcccga tggcaatggg ctcggttttc caaggctcca
      841 ccgatcaaga ggaaatgtgg gaaaaatttg atttcgacta tcgccctgaa tttctgctca
      901 atcttggcgc caatcaaatc atgagtgttg gtaatagtga tgcggtcgaa gcatcgttaa
      961 aaaagtttaa gttcatcgtt tcctttgata tctttgccac cgagaccact gaattcgctg
     1021 atatcgtgtt ccccgactgc ggttatctcg aaaccaccga ttcccgctcg aactttccgt
     1081 ttattttcag cctgcctgcc ggattgggcg agtggtgctg gccgatccgc caggaagtcg
     1141 ttgaacccga gggcgagcgc cggttatttg ctgatgtatt gcaggaactg ggcgaccgga
     1201 ttggcatcac gccagatttg aacgccgcct acaatgcttg gttcgagctt gagggcgaga
     1261 accggttaaa accggaccgc aaatatactt ttgccgagat cggcgatcat gatcttaaag
     1321 ataaattcgg tcccgacaaa ggcctcgatt attttaaaga acatggtttg gtcaaatggc
     1381 ctaaaaaacc caacgaggtt tactggcgcg cttttaccga tgtgcgggta ccgctctatt
     1441 gggaatggat gaacgacacc tgggaaaaaa caatggcgat tgccgagccc aaagggttgg
     1501 atattccgaa agaatattac agccctttgc cagattggct gccttgtccg tcccatgaat
     1561 gtgaccatga agattttgac ttttatgcct tctattaccg tgacatcgtt cacaccaata
     1621 gtctgacaat ggaaaacgcc tggctggacg aggctgctca actcgatcca tattcctata
     1681 acattgcgat caatggcggc gtcggtcgcg aaaaaggatt gcagtccggc gatcttattt
     1741 cggtcgaaaa cgaacacggc cacaaagttg agggccgtgc gcgcttgacc gaaaccatcc
     1801 acccggaagg tttgggcatt ggcgcctgcg ccggccattg ggcgcgcaga atgccgacgg
     1861 caaaaggcaa aggcgtattc tttaatgatc tggttgagct tgattggcat cattcaagcc
     1921 catctaattt aacggttgat ctttgtgcca aagtcaaagt caccaaattg gaggcagcac
     1981 aatgagatgg ggcatggtga tagatttgaa acgctgcatc ggctgctatg gctgtcagct
     2041 ctcatgcaaa gctgaaaatg gtacgccgcc tggtgtcttt ttcgcacgtg ttcacaaaca
     2101 ggaagaaggc cagtatccga cggcacagac gacattttta ccggtgctgt gcaatcactg
     2161 tgacgatccg ccctgcgttg atgtctgtcc gactggtgcc agcttcgttt gggaagatga
     2221 cggcattgtc gatatcgatg ctgataaatg cgtcggttgc cgctcctgca tgatggcgtg
     2281 tccgtattcg caacgcttcc tcaatgatga tccccagaac tattacggtg atcagggcgc
     2341 cacgccttac gagcaagccc gggtcgagcg gcaccaaact ggtgttgtca tgaagtgtaa
     2401 cttctgtcgc gaccgggtgc gcaatggaca agatccggct tgcgtcgaaa att
//
LOCUS       DASCNL010000073         2815 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000192045, whole genome shotgun sequence.
ACCESSION   DASCNL010000073 DASCNL010000000
VERSION     DASCNL010000073.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2815)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2815)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000192045"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /gene="aepY"
                     /locus_tag="QF359_00910"
     CDS             <1..942
                     /gene="aepY"
                     /locus_tag="QF359_00910"
                     /EC_number="4.1.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033980 - phosphonopyruvate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonopyruvate decarboxylase"
                     /protein_id="HJO85500.1"
                     /translation="VMCQNSGLGNCVNPITSLNFPFRIPTLLIATWRGQPGLKDEPQH
                     KLMGQITQSLMELMRVQCMTFPPMPVEITGALDRAEKVIGESNLPFGFIMEKGSVGPE
                     ELDQAPAEPKPPGSYKDLRTGKIKANRYQTLEKTLECVSDETALIATAGKCGRELFTI
                     ADRPQHIYQVGSMGGASGMGLGVALNTDKPVVVLDGDGAALMKMGSLATIGAYAPENL
                     IHVVLDNGVHDSTGGQATVSPHVDFAQVALACGYRQAATTDTLAGFGEALAKVSENSS
                     PSLIHAKINTGSIDNLGRPTVAPEDIARRFQKFITKG"
     gene            complement(980..2095)
                     /locus_tag="QF359_00915"
     CDS             complement(980..2095)
                     /locus_tag="QF359_00915"
                     /EC_number="2.6.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047304 - 2-aminoethylphosphonate-pyruvate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-aminoethylphosphonate--pyruvate transaminase"
                     /protein_id="HJO85501.1"
                     /translation="MSDEPLLLTPGPLTTSKATKEAMLRDWGSRDAQFIELTTTVCQK
                     LEAIAGADQNTRSHVCVPIQGSGTFAVEATIDTLVPRDGKVLALINGAYGQRIAKICE
                     VKGRAFVTLKTAEDTPPEADLVAVRLKDDPAITHVAAVHCETTSGILNPIAEIATVVA
                     EAGRQLIIDAMSTFGALPLSVGEIKCAAIVASANKCLEGVPGVGFAIIKQSELAASAG
                     NASSVSLDLYDQWQYLEKTDQWRFTPPTHVLAALDQALIEHEREGGVEGRGNRYHENC
                     QTLMHGMQELGFKSYLPDNLQAPIIVTFLPPDDANFKFDKFYAKLQDRGFAIYPGKLT
                     KVDSFRIGCIGHITRSNIENAVEAVAAAIEEIGVTLK"
     gene            2203..2745
                     /locus_tag="QF359_00920"
     CDS             2203..2745
                     /locus_tag="QF359_00920"
                     /inference="COORDINATES: protein motif:HMM:NF013250.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HJO85502.1"
                     /translation="MVNTRITPNQITTLRLATGIGAAASFAVGEELWSMIGCGVFVVS
                     MLLDRADGILARLSDKTSPGGHKFDLVADSLSNSLAFVGIGIGLHQSSLGELAIPLGI
                     VAGIAITAVLWLVMRAEEQEGSRAAELEGTVGFDPDDAMLALPVAVLLGWGTELIVAA
                     AFGASIFAVYFFFKFRRFLK"
BASE COUNT          644 a          753 c          714 g          704 t
ORIGIN      
        1 gttatgtgtc agaattctgg actcggtaat tgtgtcaatc caatcacctc gcttaatttt
       61 ccgtttcgta tcccaacact cctgatcgcc acctggcgtg gccagccggg gctcaaagat
      121 gagccgcaac ataagctgat gggccaaatc actcaatctt taatggagct tatgcgggtc
      181 caatgcatga cttttccacc aatgccggta gaaattaccg gcgcattgga tagagctgag
      241 aaagtgatag gggaatcaaa cctgccattt ggttttatca tggaaaaagg ctcggtcgga
      301 ccggaggaac tggatcaagc gccggcagaa ccgaagccgc cgggctcata caaggatttg
      361 cgtaccggca agatcaaagc taaccgctat caaactttgg agaaaacgct cgaatgtgtc
      421 tctgacgaaa cggctctcat cgccaccgcc ggaaaatgcg ggcgggaatt gtttacgatt
      481 gccgaccggc cccagcatat ctatcaagtc ggctcaatgg gaggtgcatc cggtatgggg
      541 ctcggcgttg cgctcaatac ggataagccg gtggtcgtct tggatggtga tggcgcagcg
      601 ctgatgaaaa tgggcagtct cgccaccatt ggcgcatacg cgcctgaaaa ccttatccat
      661 gtggtgctcg ataatggtgt ccatgattca accggcggcc aagctaccgt cagcccgcat
      721 gtcgattttg cccaagtggc cttggcctgc ggctaccgcc aagccgcaac aacagataca
      781 ttggcgggtt ttggcgaagc gcttgccaag gtgagcgaaa atagcagccc ctcgctcatc
      841 catgccaaga tcaataccgg ttcgattgac aatctcggcc ggccgacggt agctcctgag
      901 gacatcgccc gccgcttcca gaagtttatt acaaaaggtt aattttttgc ttggcacctg
      961 gcacctttta aaaagttaac tatttcaaag ttacgcctat ctcttcaatc gctgcggcaa
     1021 cagcctcaac agcgttttcg atatttgacc tggtaatgtg accgatgcag ccgatgcgga
     1081 agctatcaac tttggtcagt ttgccgggat agatcgcaaa accacgatct tgtagtttgg
     1141 cgtaaaattt atcaaatttg aaatttgcat catcaggcgg aagaaaggta actatgatcg
     1201 gtgcttgcag attatcaggt aaataagatt tgaaaccgag ttcctgcatg ccatgcatta
     1261 acgtttggca attttcgtga taacggtttc cccggccctc aacgcccccc tccctttcat
     1321 gctcaattaa ggcctgatca agggcggcca gcacatgggt cggcggggta aagcgccatt
     1381 ggtcggtctt ttccaaatat tgccattggt catatagatc gagactcacg gacgatgcat
     1441 tgcccgctga cgcagctagc tcactttgtt tgatgatggc aaagccaaca cccggcacgc
     1501 cctccagaca tttattggcc gacgcgacaa tagccgcaca tttaatttca ccaacgctta
     1561 acggcaaggc gccaaatgta ctcatggcgt caatgataag ctgccgccca gcctccgcaa
     1621 ccactgtagc aatctcagca atcgggttca atatccccga ggtcgtctca cagtgaaccg
     1681 cagcaacatg agtaatagcc ggatcatctt ttagcctcac cgccacaaga tctgcttccg
     1741 gcggcgtgtc ttccgcagtt ttgagcgtca caaaggctcg ccctttcacc tcacagattt
     1801 tggcgatccg ctgaccataa gcgccattga tcagcgccag gactttgccg tcccgcggca
     1861 ccaaggtatc aatcgtcgcc tcaacagcaa aggtgccgct gccttggatc ggcacacata
     1921 catggcttcg tgtattctga tcagccccag caatcgcttc cagcttttga cacaccgtcg
     1981 tggtcagttc aataaactga gcgtctcgcg atccccaatc gcggagcatg gcctctttgg
     2041 tcgccttcga ggtcgtcaaa ggcccggggg tcaaaagcag cggttcatcc gacatttaca
     2101 catccgttca tttgtgttga tttatttata ccatttttgg gagtttgcac cattagccac
     2161 aatacttgga tacatcgatt tgtcacgatt ggcgttcggc cgttggtcaa tacgcgtatc
     2221 acaccgaatc aaatcaccac actacggctc gcgactggta tcggtgccgc ggccagtttt
     2281 gccgtcggcg aggaattgtg gtcgatgatc ggttgcggtg tttttgttgt atcgatgttg
     2341 ctcgaccggg ccgatggtat tttagcacgg ctatcggaca aaacctcccc cggcggtcat
     2401 aagttcgatt tggttgcgga ttcactttcc aattcactgg catttgtcgg tatcggtatt
     2461 ggcctccacc aaagctctct cggcgagctg gcaatcccac ttggcattgt tgccggcatt
     2521 gctattacgg ccgtcctgtg gttggttatg cgtgctgagg aacaggaagg cagccgggcg
     2581 gcagaactgg aaggtacggt cggcttcgat cctgatgacg ccatgctcgc gttgccggtg
     2641 gcggtattgc tgggttgggg cacggagtta atcgttgctg ctgcctttgg cgcatcaatc
     2701 ttcgctgttt atttcttttt taagttccgc cgatttctca aatgaatttt gcggcgctag
     2761 ctgcacaaaa cgccaaatcg tccacagaca ataaattgtt gcaccgatgc cggca
//
LOCUS       DASCNL010000074         2093 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000199412, whole genome shotgun sequence.
ACCESSION   DASCNL010000074 DASCNL010000000
VERSION     DASCNL010000074.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000199412"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(116..301)
                     /locus_tag="QF359_00925"
     CDS             complement(116..301)
                     /locus_tag="QF359_00925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85503.1"
                     /translation="MAIFAWLIFPAKAEEGKVVYNKICYFCHDVGLVGSPEIGDAEEW
                     LRRCNKGLEKLYQNTIK"
     gene            599..>2093
                     /locus_tag="QF359_00930"
     CDS             599..>2093
                     /locus_tag="QF359_00930"
                     /inference="COORDINATES: protein motif:HMM:NF009410.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HJO85504.1"
                     /translation="MDDFSNDEKFTYLRYKVGDDSPPEWNTQHVNSGESSKCPTYVHR
                     APPCQGSCPSGHDIRGWLSIARGLDKPQEGQTWQELAFERMSVANPFPSIMGRVCPAP
                     CQDGCNRNEVEEAVGINSVEQYVGDWALGQGKTFAPPEVESGKRIAIIGGGVGGLAAA
                     YFLRLRGHGCTIFDTYKELGGMMRFGIPSYRTPRDVLDGEIERIINMGVEVRLNTRIG
                     KDISVEELEKDYDAIFWAIGAQTGKLLPIPGVNAPNCVDGMSFLRAFNEDRLQHLDGR
                     VLVVGAGDTAMDVAAVARRIGHIENSSEKDRPDNVILGHTIHDVAEAARRQGADVWVV
                     YRRPIDKAPATEHELTSIIAEGVEIHENLAPLEVILGEDGRATALRVVPVDWSSGEMV
                     VKEGEEFDIDCALIVGATGQAGDFAGLEEFDNGKGLMDVDNFFQVLGKPGHFVGGDVI
                     KPHLLTTAIGHASIAVEGIDRYLQGDNLKKRPKVDVHHFSLLQELRSH"
BASE COUNT          504 a          484 c          576 g          529 t
ORIGIN      
        1 cattacctgt ctgatctgcg ggttattcgc tttgttccag cagatagtcg acggcatttt
       61 tcatgttggt ctctttatac acgcgtcggt acaaccgttc catcatatgg ccggttcact
      121 ttatcgtatt ttgatagagc ttttcgagac ctttattaca ccgtctaagc cattcttcag
      181 catcgccgat ttcaggtgag ccgactagac caacatcgtg acagaaataa cagattttgt
      241 tgtatacgac tttgccttct tcggctttgg cggggaaaat cagccaagcg aaaattgcca
      301 ttgatgccat agccaaccta atcatttgaa ctaaacctct atcgtgagaa tagcacgctt
      361 gggcgaattg ctcattatac aaaacctgct actctaccgg tgcgctttat cggcttgagg
      421 ggctgcattt aattttacga ttcatttgtg tgtatttttt tgccatgata taaattgtgg
      481 atattgcggt ttggcagatt gcctaaagag gatcgcatag aataacataa aatatataac
      541 atccattcat aatcctgaaa ttatggcgga atgggagcat ataaggggat aactgaaatt
      601 ggatgatttt agcaacgacg agaaattcac ttatttacgc tacaaagtgg gtgacgattc
      661 accgccggaa tggaatacgc agcacgttaa ttctggcgaa tccagcaaat gtcctacata
      721 cgtacatcgt gcaccgcctt gtcagggaag ctgcccgtcc ggtcacgata tccgcggctg
      781 gttatccata gcccgtggtt tggataaacc ccaagaagga caaacctggc aggagcttgc
      841 ctttgagaga atgagcgtcg ccaatccgtt cccgtcgatt atggggcggg tctgtccggc
      901 gccatgccag gacggctgca accgcaacga agtggaagaa gcggtcggca tcaattcggt
      961 cgaacaatat gtcggcgatt gggcgctcgg ccagggtaaa acttttgctc cgccagaagt
     1021 ggaaagtggt aagcggatcg ccattattgg cggtggtgtg ggcggacttg ccgccgccta
     1081 tttcctccgg ttgcgcggcc atggctgcac catcttcgat acctataaag aactcggcgg
     1141 catgatgcgt ttcggaattc ccagttatcg cacgccgcgc gacgttctgg acggagaaat
     1201 tgaacgcatc attaatatgg gggtcgaggt acggctcaat acccggattg gcaaggatat
     1261 ttcagtcgag gaattggaaa aggattatga cgccattttt tgggcgattg gcgcgcagac
     1321 tggaaaattg ctacccattc caggagttaa tgcgccaaat tgtgtcgacg gcatgtcgtt
     1381 cttgagggcc tttaacgaag atcgcctaca gcatctcgac ggcagagttc ttgtcgtcgg
     1441 cgccggcgac acggcgatgg atgtggctgc ggttgcccgg cgtattggtc acatcgagaa
     1501 cagcagtgaa aaagaccgtc ctgataacgt tattctaggt cataccattc acgacgtcgc
     1561 tgaggccgcg cggcgtcagg gtgccgatgt ctgggtggtt taccggcgtc cgatcgataa
     1621 agcgccagca accgaacatg agctgacctc aataatcgcc gagggcgtgg aaattcatga
     1681 gaacctggcg ccgttggaag taatcctcgg cgaggatggc cgggccacag cgttgcgcgt
     1741 cgttccggtc gattggtcgt ctggtgaaat ggtggtcaag gaaggagagg agtttgatat
     1801 cgactgcgcc ttaattgttg gcgcgacggg gcaggcgggt gattttgccg ggctcgagga
     1861 attcgataac ggcaaaggtc tgatggatgt cgacaatttt ttccaggtac tgggaaaacc
     1921 tgggcatttc gtcggtggag atgtcatcaa accgcatctt ttaaccacgg caatcggcca
     1981 tgcctcaatt gcggttgaag gaatcgacag atatttgcag ggcgataatc tcaagaaacg
     2041 tccgaaggtg gatgtccatc atttcagcct gctgcaggaa ttgcgcagcc atg
//
LOCUS       DASCNL010000075         1885 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000199725, whole genome shotgun sequence.
ACCESSION   DASCNL010000075 DASCNL010000000
VERSION     DASCNL010000075.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000199725"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1582
                     /locus_tag="QF359_00935"
     CDS             <1..1582
                     /locus_tag="QF359_00935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85505.1"
                     /translation="RNLVEKLFPKLPVNSSSRTMRSLMRRLLLSTAKAPVNADPLDNQ
                     LASAQPDQMPVADPKVPKPEEEGKLLIMRIERLSAMGDVAAVDGLLKVAPNRDTDHAL
                     LRSETDVLFFSNDNARACPLVASQIHNVDTPYWQKAFIYCQALAGEHDKATLGADLLR
                     ETGEKDEVFFGLIDALTGVEKFEVASLTNPAPLHFSMIRAAKAKLPKDVTSSNNPAVL
                     KTIATSPNAEPALRIDAAERAEAMGALDTEVLRQLYAGVTFTKQTLDNALSQASAERT
                     ALSRALLYRKALVESIATAKAEILVQVFKLAREGGLFQSTARVYHRILKEFQPTQDLV
                     WFAPEAARALLAAGDGPAATIWFNVLRTTGIINEKAAALRDQLMPLARLTGNVADEEW
                     STTKLDGWWRAETVTSEEKPVDIERAHKRATLLYNLLEAQGDPVSARRWEALLDGPPQ
                     SSTVMPQSALWRSLNKATDEVKKAETVLLAMLALGQAGPTQVNPTVLRQVVTSLRLVG
                     LAQEARALALEAAVAEGL"
     gene            1675..>1885
                     /locus_tag="QF359_00940"
     CDS             1675..>1885
                     /locus_tag="QF359_00940"
                     /inference="COORDINATES: protein motif:HMM:NF014898.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HJO85506.1"
                     /translation="MLRKKRVRPKPPPSRQVEIFLEMMAAERGASANTITAYGRDLGE
                     FGVFMMRRKRNIEAAVAKNIQDYLAQ"
BASE COUNT          439 a          493 c          524 g          429 t
ORIGIN      
        1 ccgcaatctg gttgaaaagt tatttcccaa attaccggtt aattcgtcat cgcgcacgat
       61 gcgtagtttg atgcgccgtt tactgttgag cacagctaaa gctccggtta atgctgatcc
      121 gcttgataat caattggcct ccgcgcaacc cgatcaaatg ccggtggccg atcccaaagt
      181 gccgaaaccg gaggaagaag gcaaactcct catcatgcgg attgagcgct tgtcagcgat
      241 gggtgatgtt gcggcggtcg atggcttatt aaaagtagcc cctaatcggg ataccgatca
      301 cgccctgttg cgcagcgaaa ccgatgtgct gtttttttcg aacgataatg cccgcgcctg
      361 tccgctcgtg gcatcgcaaa tccacaatgt cgatacgccg tattggcaaa aagcgtttat
      421 ctattgtcag gcgctggcgg gtgaacacga taaagctact ctcggggctg atctgttgcg
      481 cgaaaccggt gaaaaagatg aagtgttttt tggcctgatt gacgcgttaa ccggtgtgga
      541 aaaatttgag gttgccagtt tgaccaatcc agcgccgctg catttttcga tgatccgggc
      601 ggccaaagca aaattgccga aagatgtcac atcgtccaat aatccggctg tgctcaaaac
      661 cattgcgacc agccccaacg cggagccggc cttacgcatt gatgcggcgg aacgcgccga
      721 ggcaatgggt gcgctggata ccgaagtgct gcgccagctt tatgccgggg tgacatttac
      781 caagcaaact ctcgacaatg ccttgtcgca agccagcgcc gaacgcaccg cgcttagtcg
      841 ggcgctgctt tatcgcaaag ccttggtcga aagcattgcc accgcaaagg ctgaaattct
      901 ggtacaggtg tttaaattgg cccgtgaagg cggtttgttc caatcgactg cacgggttta
      961 ccaccgcatt ttaaaagagt ttcagccgac ccaagatttg gtttggtttg ctcccgaagc
     1021 tgcccgcgcc ctgctggctg ccggtgacgg tccagccgcc acgatctggt tcaatgtgtt
     1081 acggacgacc ggaatcatca atgagaaggc ggctgcctta cgcgatcaat tgatgccgct
     1141 cgcgcgtctg accggtaatg tcgccgatga agaatggagc accaccaagc ttgatggctg
     1201 gtggcgagcg gagacggtga cgagcgaaga gaaaccggtt gatatcgagc gcgcccataa
     1261 acgggctacc ttgctgtata atctgcttga agcccaaggt gatccggtgt cggcacggcg
     1321 ctgggaagcg ctgttggatg gcccgccgca gtcctcgacc gtaatgccgc aatctgctct
     1381 gtggcgttcg ctcaataaag ccaccgatga agtaaagaag gccgaaaccg tattgctggc
     1441 gatgctggct ttgggccaag ccggaccgac ccaggtaaat ccaaccgtgc tgcgccaagt
     1501 agtgaccagt ctcaggctgg ttggactggc ccaagaagcc cgcgccctgg cgcttgaggc
     1561 ggcggttgcc gagggacttt aaacaccttt gcttccagcc atttttgaga aattttcaaa
     1621 aaatagtgta agatcggtca acaattttta accaagctcc gttatacttt gctcatgttg
     1681 cgaaaaaagc gagtccggcc taagcccccg ccatctcggc aggttgaaat atttctggaa
     1741 atgatggctg ccgagcgtgg ggcgtccgcc aacacgatta ctgcttacgg ccgtgatctt
     1801 ggagaatttg gtgtcttcat gatgcggcgt aaacgcaata tcgaagcggc agttgctaag
     1861 aatatccaag attacctggc tcaac
//
LOCUS       DASCNL010000076         1293 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000201543, whole genome shotgun sequence.
ACCESSION   DASCNL010000076 DASCNL010000000
VERSION     DASCNL010000076.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000201543"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            340..416
                     /locus_tag="QF359_00945"
     tRNA            340..416
                     /locus_tag="QF359_00945"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:374..376,aa:Asp,seq:gtc)
     gene            481..846
                     /locus_tag="QF359_00950"
     CDS             481..846
                     /locus_tag="QF359_00950"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HJO85507.1"
                     /translation="MENLLVEYLPILIFVGLAVGLAVVIPIASMIIVPQKPDAEKLSA
                     YECGFEAFEDARIKFDVRFYLVAILFIIFDLEVAFLFPWAVSLGTIGVLGFWSMVVFL
                     GILTVGFIYEWRKGALDWE"
     gene            855..>1293
                     /locus_tag="QF359_00955"
     CDS             855..>1293
                     /locus_tag="QF359_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HJO85508.1"
                     /translation="MDFDQSSQSSRVPIPPGAEQDALLKNVTDTLVDKGFVVAQLDNL
                     VNWARTGSLWPMTFGLACCAIEMMHAYVSRYDLDRFGVVPRPSPRQSDVIIVAGTLTN
                     KMAPAFRKVYDQMSEPRYVISMGSCANGGGYYHYSYSLVRGCDR"
BASE COUNT          301 a          274 c          318 g          400 t
ORIGIN      
        1 ccacatcaac agcttcaacc tgagcaacat atcgaggtgt gtgtttgatt ttaaagtaaa
       61 aatactgctt gttgaggcgt ttagaaaatt tctcaaatgc cggtttagtg cttacacaga
      121 aacgcctttt tatttgttca attgattctc gtttttcacc ccaaaaataa ttgtattttc
      181 agcaacctaa gccctgattt tacggtaaaa aagtcaaatc tattggatag ataaactagg
      241 aaacggaatt acttaattct cggtgaggta tctactttaa gattgcttga cactactcaa
      301 gagctggctt acacaccgct cacgagcaag cacagtttag ggggtgtagc tcagttggtt
      361 agagcgccgg cctgtcacgc cggaggccgc gggttcgagt cccgtcactc ccgccacttt
      421 tcctcactta aatagttgtg cgctgcgcag aacaataggg gctaatttag aaagattctc
      481 atggaaaatc tacttgttga atatcttcca attttgattt ttgttggcct tgctgttggg
      541 ctcgctgtcg tcattccaat tgcgtctatg atcatcgttc cgcaaaagcc ggatgctgaa
      601 aagctgtcag cttacgaatg cgggtttgag gcgtttgaag atgcgcggat caagtttgat
      661 gtacgatttt atctggtcgc cattttattt attatttttg atttagaagt ggcatttctg
      721 ttcccttggg cggtatcgct cgggacgatc ggagtattag gtttttggtc gatggtcgtg
      781 ttcctcggta tacttacagt tggctttata tatgagtggc gcaaaggcgc cctcgattgg
      841 gagtaggtga cgttatggac tttgatcaat cttcccaaag ttctcgggtc cccatcccac
      901 ccggcgccga acaggatgcc ttgctgaaaa acgtcaccga tacattagtt gataaagggt
      961 tcgttgttgc gcaattggat aatttagtga attgggcacg gacgggctcg ctctggccaa
     1021 tgacgtttgg cttggcttgc tgtgcgatcg aaatgatgca cgcctatgtt agccgctatg
     1081 atttagaccg ttttggtgtt gtgccgcggc cgagccctcg gcaatcagat gttataatcg
     1141 tagctgggac tctcaccaac aaaatggcac cggctttccg caaagtttat gatcaaatgt
     1201 ctgagccgcg ctatgtgata tcgatgggtt cctgtgctaa tggcggcgga tattaccatt
     1261 attcttattc acttgtgcgc ggttgtgatc gag
//
LOCUS       DASCNL010000077         1577 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000207242, whole genome shotgun sequence.
ACCESSION   DASCNL010000077 DASCNL010000000
VERSION     DASCNL010000077.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1577)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1577)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000207242"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="QF359_00960"
     CDS             <1..307
                     /locus_tag="QF359_00960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85509.1"
                     /translation="DFALSRLYKRFYSVNSDFDVEKLPPADVDHFKLTWYVALRELMF
                     FNMADQARLEDIKEAFYAEMELTAADRKAAPFLFKVCSAIPKIITRNIDFFRARDAE"
     gene            complement(384..>1577)
                     /locus_tag="QF359_00965"
     CDS             complement(384..>1577)
                     /locus_tag="QF359_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO85510.1"
                     /translation="IRVNVLRSVLTALGIIIGVAAVIIMIAVGAGAQSKVDNLIKSLG
                     SNLVLVLPGTTTSSGARGARGSRPTITEDDAIAIQNEIDTVMAAAPMVRGGGQLIYGN
                     QNWSTVIYGVTPEYQVAKEWQMKDGRWFNTEEVKSAAKVALVGETVIENMFQGINPVG
                     ETIRIKRVPFKIIGSLEPKGETPLGTDQDDTVVVPLSTAKKRLLGGRRLKGKLVNVMF
                     VKSFTAASVDETVRAMTELLRQRHRIQPGQPDDFFVRNLSQILQARADSSRVMTLLLA
                     AVASVSLIVGGIGIMNIMLVSVTERTREIGLRMAIGARGKDILLQFLIEAVTLSLIGG
                     AIGVALGLSGSVLIAELGGWPAIIQIKSVFLSFGFAAAVGVFFGFYPARKAARLDPIE
                     ALRYE"
BASE COUNT          397 a          422 c          387 g          371 t
ORIGIN      
        1 cgactttgct ctgagccggc tctataagcg gttctatagc gtcaattctg attttgatgt
       61 cgagaaactg ccgccagcgg atgtcgacca tttcaaactg acgtggtatg ttgccctcag
      121 ggagttgatg ttttttaaca tggctgacca agccaggctc gaagatatta aagaagcttt
      181 ttatgcagaa atggaactaa cagcagcgga ccgaaaggca gcgccgtttc tgttcaaagt
      241 ctgttcggct attccaaaaa tcattacccg caatattgat ttttttcgag cgcgggatgc
      301 tgagtagatc gccggtttta gaggcgacag ctgttttcac gtccatgaat aattccctga
      361 ataaatctta gttatttgct gatttattcg tagcgaaggg cctcgatggg gtcaagccga
      421 gccgcttttc tcgccgggta aaagccaaag aaaacaccca cggcggcggc aaagccaaag
      481 gacagaaaca ctgattttat ttgaattatg gcgggccagc cgccgagctc ggcgatcaag
      541 actgatcctg aaaggccaag ggcgacaccg atggcaccac caatcaaaga taacgtcacc
      601 gcctcgatca ggaattgcag caggatatcc ttaccgcggg caccgatggc catacgcaga
      661 ccaatctcgc gggtgcgctc ggtcactgag accagcataa tattcataat gccaatacca
      721 ccaacaatca gcgacaccga ggcaactgca gcgagcagca atgtcattac ccgtgacgaa
      781 tcggctcggg cttgcagaat ttggctgagg ttgcggacaa aaaagtcatc gggctggccc
      841 ggttgaatgc ggtggcgctg gcgcagcagc tcggtcatcg cgcgcaccgt ctcatcaaca
      901 ctggcggcgg taaaggattt tacaaacata acattaacaa gtttgccttt gaggcgtcga
      961 ccgccaagca gccgtttctt agctgtcgac aatggcacca cgactgtatc atcctggtcg
     1021 gtacccaagg gagtctcgcc tttaggctct agcgagccaa taattttaaa cggcacccgc
     1081 ttaatacgaa tggtctctcc caccgggttt ataccctgaa acatgttttc gatcactgtc
     1141 tcgccaacca gcgcaacctt agcagccgat tttacttctt cggtattaaa ccagcggccg
     1201 tctttcatct gccactcctt agcgacttga tattcaggtg tgacaccata gatcaccgtc
     1261 gaccagtttt gattgccgta aataagctga ccgccacccc gcaccatcgg ggccgccgcc
     1321 ataaccgtgt cgatttcatt ttgaatagcg atggcatcat cttcggtaat cgttggcctt
     1381 gagccgcgag cgccgcgtgc cccgcttgat gtcgttgtcc ccggcaatac cagaacgaga
     1441 ttcgagccca ggcttttaat tagattgtcg actttggatt gagcgccagc gccaacagca
     1501 atcatgataa ttactgctgc aacgccgata atgataccaa gcgccgttaa aacgctgcgg
     1561 agaacattga cccgaat
//
LOCUS       DASCNL010000078         1231 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000210929, whole genome shotgun sequence.
ACCESSION   DASCNL010000078 DASCNL010000000
VERSION     DASCNL010000078.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000210929"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="QF359_00970"
     CDS             complement(<1..642)
                     /locus_tag="QF359_00970"
                     /inference="COORDINATES: protein motif:HMM:NF014700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HJO85511.1"
                     /translation="MEMKISPDLTNDTRAKRRVTILGATGSVGCNTLDLIRNQPDQFA
                     IEALTGNKNVDLLISQAKEFTPKLAVIGDDALYGELKDGLSGTDIAAASGQAAMLEAA
                     DVPSEIVIAGIVGVAGLAPTLKAAQRGVIIALANKECLVCAGDFFLDEIEHSGATLLP
                     IDSEHNAIFQVFDIAQAENVDHLTLTASGGPFRNASLTEMLAVTPEQAVVHPNW"
     gene            complement(633..>1231)
                     /locus_tag="QF359_00975"
     CDS             complement(633..>1231)
                     /locus_tag="QF359_00975"
                     /inference="COORDINATES: protein motif:HMM:NF013327.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HJO85512.1"
                     /translation="PYFEFMVSVVGVLAALEWQRLISSNGPQPQSWVWLIAGALYILL
                     PCLILIWLRGIDNQGRQIIIWLFAVIWASDIGAYFSGKSIGGQKMAPIISPNKTWAGF
                     IGGLVLACVTGLILNNCTEPSFETSEIILASIILSIIGQFGDLLESWVKRTFQVKDSG
                     TLIPGHGGVLDRIDAILLATPAAGLIVLFYEIGEVPWK"
BASE COUNT          365 a          303 c          246 g          317 t
ORIGIN      
        1 ccaattcgga tgaacaactg cctgctctgg tgtaactgct aacatctcag tgagtgaggc
       61 attccgaaat gggccacccg aagcagttaa tgtcaggtgg tcaacatttt cggcttgggc
      121 aatgtcaaac acctgaaaaa ttgcgttatg ttctgaatca atcggcaata aagttgcacc
      181 gctgtgttct atttcgtcta agaaaaagtc acccgcacaa accaaacatt ctttatttgc
      241 gagagcgata attacgcctc tttgtgcagc ttttaaagtt ggcgccaaac ctgcaacacc
      301 gacgataccg gctattacga tttcggaagg cacgtcagca gcctctaaca tcgccgcttg
      361 accagacgcc gctgcaatat cagttccgct taagccatct ttaagctcgc catataaagc
      421 atcatcacca atgaccgcta acttgggcgt aaattctttg gcttggctaa taagaagatc
      481 gacatttttg tttccagtca gtgcttcaat tgcaaattga tctggctgat ttctgatgag
      541 atccaatgta ttacacccga ccgaaccagt ggcgcccaaa atcgttacgc ggcgtttggc
      601 gcgagtgtcg tttgttaagt cgggtgaaat cttcatttcc atggaacttc accaatttca
      661 taaaataata caattaaccc ggcggcgggt gttgctagca gaatagcatc tattcgatct
      721 aaaacgccac catgtccggg tattaacgtg ccagaatcct ttacttgaaa tgttctttta
      781 acccaagatt ccaaaagatc cccaaattga ccgatgatag atagaattat actggcaagg
      841 attatttcac tggtttcaaa tgacggctca gtgcagttgt tcaaaattaa gcctgttaca
      901 caggccaaaa ctaatccacc aataaaacct gcccaagttt tatttgggct gattattgga
      961 gccattttct ggccaccaat agacttgcca gaaaaataag cgccgatatc ggacgcccaa
     1021 atcacggcaa acaaccaaat aataatttgc cgtccctggt tatcaatgcc gcgcaaccaa
     1081 attaaaatca ggcaaggtaa taaaatatat aatgcgccgg cgatcagcca aacccaactc
     1141 tgcggttgcg gaccattact gctgataagc cgctgccatt ctagggccgc caatacacca
     1201 acgacactaa ccatgaactc aaaatatggg a
//
LOCUS       DASCNL010000079         1746 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000213158, whole genome shotgun sequence.
ACCESSION   DASCNL010000079 DASCNL010000000
VERSION     DASCNL010000079.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000213158"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(178..1098)
                     /locus_tag="QF359_00980"
     CDS             complement(178..1098)
                     /locus_tag="QF359_00980"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketopantoate reductase family protein"
                     /protein_id="HJO85513.1"
                     /translation="MKIAVMAAGAVGGYFGVRLAEAGHDVVFIARGKHLEAIRSQGLK
                     VRSELGDVHIPNANATDDTASVGPVDVILFAVKLWDTAASARACKQMLADNTTVISLQ
                     NGVESSMVIAEKIGAKHALAGTAQVSSVIAEPGVIQHFGNFAKLIFGESNNQISDRTK
                     AFLKACQDSGIEAMIPDDIQVAVWEKFVTLATLSGMTTASRSPIGKILANPDMAKTYR
                     ATMTEIAAVGRATGANLPDDIVERQMDFATNMMPPDMTASTLKDLEKGYRLETPWLTG
                     AVVRMGRKLNIPTPVNETLYAVIKPFENGK"
     gene            complement(1100..1507)
                     /locus_tag="QF359_00985"
     CDS             complement(1100..1507)
                     /locus_tag="QF359_00985"
                     /inference="COORDINATES: protein motif:HMM:NF013098.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJO85514.1"
                     /translation="MSRLRIDHLGIIVADLDKAIERFRFLIGGKPAYTKDMPDVGLRI
                     TTFEAENISLELIEYVGPESNFAKEVMGNEIGLNHISIGVNDLNKAINEFTEAKFKIM
                     DGFPRKGSHGQVAFFRRDNDTDLLFEICERTEI"
     gene            complement(1504..>1746)
                     /locus_tag="QF359_00990"
     CDS             complement(1504..>1746)
                     /locus_tag="QF359_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85515.1"
                     /translation="HNSKEIVKNIANHTVLSQIAGGGGGGYGDPFKRPIEVVLNEVKN
                     GRVSVKRAKVDYGVVINPESLELDDTANKTVRSNRP"
BASE COUNT          425 a          452 c          389 g          480 t
ORIGIN      
        1 ctgaacacat cggtcgggca gatcgaggcg caaataccac aaccatcaca atagacgtta
       61 aagacaggtg gcatatccgt ctccccatat cgaatcgaaa tcgatttatt tttccaccaa
      121 tgaattatga gaggctaaca gtaaatcacc ttgattttaa tcaaatggtg aagggagcta
      181 tttaccgttc tcaaagggtt taattacggc atagagcgtt tcattgaccg gtgttgggat
      241 atttaatttt ctacccatcc tcaccactgc gcccgttaac cagggagttt cgaggcggta
      301 acctttctcc aaatccttca gcgttgaagc tgtcatatcc ggcggcatca tgttggtggc
      361 aaagtccatc tggcgctcga cgatgtcgtc cggcaaattc gcaccagttg cacgcccgac
      421 tgctgctatc tctgtcattg tcgcacgata tgtcttcgcc atgtctggat tggcgagaat
      481 ttttccgatc gggctccggg acgctgtcgt catgccgctc aacgtggcca aggttacaaa
      541 tttttcccat acggctacct gaatatcatc tgggatcatc gcttcaatgc cactgtcttg
      601 gcaggctttt agaaatgcct tagtccgatc tgatatttgg ttgttgctct cgccaaaaat
      661 cagtttagca aaatttccaa aatgctgaat gacaccgggt tcggcgatca cagatgatac
      721 ttgcgcagtt ccggcaagcg catgtttagc gccaattttt tcagctatca ccatgctgct
      781 ttcgactcca ttttgcagcg atataacagt ggtgttgtcc gccagcatct gcttgcaggc
      841 tctagccgaa gccgcggtat cccaaagttt aacagcaaag aggatgacat cgaccggccc
      901 gacactggcg gtatcatccg tcgcgtttgc gttgggtata tgaacgtcgc caagctcgct
      961 tcgcactttt aaaccctggc tgcgaatggc ttccagatgt tttccacggg cgataaagac
     1021 gacatcatga ccggcttcgg ccaatcgcac gccaaagtat ccaccaaccg cacccgctgc
     1081 cataaccgca attttcattc taaatctccg tccgctcaca aatctcgaac aggaggtctg
     1141 tatcattgtc gcgtctaaag aatgcaactt ggccgtgaga acctttgcgg gggaagccgt
     1201 ccattatttt aaatttagcc tcggtaaatt cgttgatggc tttattaaga tcatttacac
     1261 ctatagaaat atgattgagg ccgatttcgt tgcccatgac ctctttggcg aaatttgatt
     1321 ctggtcccac atattcgatc agctccaaag aaatattttc agcctcaaaa gtggtaatgc
     1381 gcaatccaac gtcaggcatg tctttggtgt aggcgggttt gccgccgatc aggaagcgaa
     1441 atctctcaat cgctttgtcg aggtcggcga caattatgcc aagatgatca attctaagcc
     1501 tgctcatggg cggttactcc gtacagtttt gttggccgta tcatccaatt ctaaactctc
     1561 cggattaata acaacaccat aatccacctt agcccgcttg accgataccc gcccgttttt
     1621 aacttcattg agaacaacct caatcggacg cttgaacggg tcgccatagc cgccgccacc
     1681 gccgccggcg atttggctga ggacggtatg attagcgatg tttttaacaa tttcttttga
     1741 attatg
//
LOCUS       DASCNL010000080         2001 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000213576, whole genome shotgun sequence.
ACCESSION   DASCNL010000080 DASCNL010000000
VERSION     DASCNL010000080.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000213576"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /locus_tag="QF359_00995"
     CDS             complement(<1..235)
                     /locus_tag="QF359_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJO85516.1"
                     /translation="MTSTVIDAAISHARTIIAALFLILISGTISYIGIPKESAPDINI
                     PIIYVNAPLDGVSPEDAERLIVRPIEQELRVIEG"
     gene            complement(238..1341)
                     /locus_tag="QF359_01000"
     CDS             complement(238..1341)
                     /locus_tag="QF359_01000"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HJO85517.1"
                     /translation="MKKSYLIAAAVAVVAVGWVASGQLGGNKDVNVAPSKKASKVQSA
                     APLPRVRVKSSVAEIRVNELVVLGKTEASRKVTLKAETAGRIIAIKAKKGDKVKKGDV
                     IVQIALDDRQSRLLEAKAKLRQRQIEYQAAKELSARNFRSKLKLAEAQAQLDSAKANL
                     KNIKVDLNRTVIRASFAGVLELRPVEIGDFVKIGNPVATIVDLSPILVVANIPEVQIE
                     KVRQGLSAKARLVSGKIFSGKIRYVSTEAVNATRTFKVEMETPNIDRSIVAGLTAELR
                     LSLGDVKAHQVSPAVLTLSHDGLVGVKSVNASDIVVFHKIELIADTPDGMWLAGLPDQ
                     VTIISVGQEFVKVGQKVEPITSSGTAVSELKGK"
     gene            complement(1338..1880)
                     /locus_tag="QF359_01005"
     CDS             complement(1338..1880)
                     /locus_tag="QF359_01005"
                     /inference="COORDINATES: protein motif:HMM:NF015513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HJO85518.1"
                     /translation="MDTKTLCLGALSLGDASGYEIKKMFEEGTFSHFYDAGYGSIYPA
                     LNRLLTEGLVTCTEVEQENRPLKKVYSMTGTGMAKLKADLSEEPSRDKTRSESIVMMF
                     FSHLIGSAHREEILQSYIDYYRKGVDCIENIDPTGQPFGRQFVRGLGLAVYKAAAKYL
                     EENKDLLLSDEEERDIGDAA"
BASE COUNT          500 a          495 c          443 g          563 t
ORIGIN      
        1 caccctcaat cacacgcagt tcttgctcga ttgggcgaac aatgagacgc tcggcatcct
       61 ccggtgacac accatcgagc ggtgcattga cataaatgat cggaatattg atatcggggg
      121 ctgattcttt tggaatgccg atataggaaa tcgttccgga aatcaatatc agaaagagcg
      181 ctgcgattat tgttcgcgca tgactgatgg ctgcatcaat gactgtcgaa gtcatggcta
      241 tttacctttt aattcggaga ccgccgttcc acttgaagtt atcggctcga ctttctggcc
      301 aactttgacg aattcttggc cgacactgat gatcgtcacc tgatccggca gaccggcaag
      361 ccacatacca tcaggcgtat ctgctattag ttcaatttta tgaaaaacaa caatatcgct
      421 agcatttacc gatttaaccc caaccaaacc atcgtgcgac aaagtgagga cagctggcga
      481 tacctggtga gctttaacgt cacctaatga gagacgaagt tcagcggtta atccggcaac
      541 gatggaacgg tcaatatttg gcgtttccat ttcaacttta aaagttctgg tggcgttgac
      601 cgcctcggtc gaaacatacc tgatcttccc gctaaaaatc ttgccgctga ccaagcgtgc
      661 tttggccgat aagccttggc ggaccttttc aatttgcact tccggaatgt tggcgacaac
      721 cagaatcggc gagaggtcaa caatcgttgc caccgggttg cctattttaa cgaaatcacc
      781 gatttcgacc gggcgcagtt ccagtacccc agcaaaggac gcccgaatga cagtgcggtt
      841 tagatcaact tttatattct tgagatttgc cttggcggaa tccaattggg cttgtgcctc
      901 ggcaagcttt aattttgagc ggaaattacg cgccgacaat tccttggctg cttgatattc
      961 aatttggcgc tggcgcagtt tcgccttcgc ttccaacaac cgggactggc gatcatccaa
     1021 ggcaatttgg acaatcacat cgcctttttt tactttgtcg cctttcttgg ctttgatggc
     1081 gatgatccgg ccagctgttt ccgccttaag agtgactttg cgagaagctt cggttttacc
     1141 gagaacaacc aactcattaa cccgaatttc ggcaacggat gatttcaccc gcacgcgcgg
     1201 taggggagct gcactttgga ccttgcttgc ttttttcgat ggcgcgacgt ttacatcttt
     1261 attaccgcca agttgtcccg acgccaccca gccaactgca actacggcaa cagcggcagc
     1321 tattaaatat gattttttca agcagcgtct ccaatgtctc tttcttcttc gtcagagagt
     1381 aataggtcct tgttctcttc taggtatttg gcagcagctt tgtagaccgc aagacctaag
     1441 ccgcggacaa attgacggcc aaatggctgg ccggttggat cgatattttc gatacaatcg
     1501 acgcctttac ggtaataatc gatataggat tgaagaattt cttcacgatg cgcagagcct
     1561 attaaatgac tgaaaaacat catgacaata ctttccgagc gagttttgtc gcgggatggc
     1621 tcttcactca aatctgcttt aagcttagcc attccggttc cggtcatgct atagactttt
     1681 ttcaacggcc ggttttcttg ctctacttcc gtacaggtga ccaaaccttc tgtcagcaac
     1741 ctattcaggg ccggatatat tgagccgtaa cccgcatcat agaagtggct aaacgtgcct
     1801 tcttcgaaca ttttttttat ttcatagcct gaagcatcgc caagactaag agcaccgaga
     1861 caaagcgttt tggtatccat aacaaacctt tttcctatat ttgatcgata tatattatgt
     1921 tgatatatat catttcgata tatagacaag tagttacata ccacaatttg ctaaaaaccc
     1981 cacggtcttt cggcgatggg g
//
LOCUS       DASCNL010000081         1740 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000214436, whole genome shotgun sequence.
ACCESSION   DASCNL010000081 DASCNL010000000
VERSION     DASCNL010000081.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000214436"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1740)
                     /locus_tag="QF359_01010"
     CDS             complement(<1..>1740)
                     /locus_tag="QF359_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HJO85519.1"
                     /translation="EAFFDYASIYLTDLTKASFNVRKTLITKPAAKKSPGVIDILNSE
                     GIRLEQAIWHWRAVSIAKSTAGLLVLGEALLATYRALKEERALLDYDDLILLAGELLH
                     REGVAPWVLFKLDGGIDHVLIDEAQDTSLDQWRVIEALADEFFAGLGSHETPRTIFAV
                     GDVKQSIYSFQGADPITFGAMRDQFAGRAQAAGQEWRPIDLTVSFRSTQAVLGAVIAV
                     FSQAQAVDGVTLEDEIIHHEAWRVEQGGLVELWPPVEPRAADAPVAWKPPVERIRGDA
                     PQTRLAGLIAGRIARMIKDKEILEAKGRPIEPGDVMVLVRRRSGFVEDLVRALKELEI
                     DVAGVDRMVLTEQMAVMDLIALGKFLLLPEDDLTLATVLKSPLIGLTEEQLFDLAYQR
                     EGTLWQSLAAHIKDDPDFAVAHDVLSTLLARADYVPPFELYSEILGKHHGRFKLVSRL
                     GPDALDPIAEFLNLALVYEKSHVASLEGFLYWVEAGEVDIKRDLEQATQNAVRVMTVH
                     GAKGLQAPIVFLPDTLQMPRQSAGLFWPQDDTGEDLALLWPPCRGLYEQVAEHERDAV
                     IQRRDQEYRRLLYV"
BASE COUNT          435 a          511 c          423 g          371 t
ORIGIN      
        1 cacatagagc agacgtcggt attcctgatc gcggcgttga atgaccgcgt cgcgctcgtg
       61 ctcagccact tgctcataaa gccctcggca gggtggccac agcaatgcta aatcttcacc
      121 ggtatcatct tgtggccaaa acaagccagc actctgcctc ggcatttgca aggtatccgg
      181 taaaaagaca atgggcgcct gcaggccttt ggcgccatga accgtcatca cccgcaccgc
      241 attttgcgtc gcttgttcga gatcgcgctt aatgtcaacc tcacccgctt cgacccaata
      301 gagaaatcct tcgagggagg cgacatggga tttctcatag accagcgcca aattgagaaa
      361 ttccgctatc gggtcgagcg catccggccc gaggcgcgat accaatttaa accggccatg
      421 atgtttgcca agaatttcac tataaagttc aaacggcggc acataatcgg ctcgcgccag
      481 taaagttgat agcacatcat gggcgacggc aaaatcagga tcatccttaa tatgagccgc
      541 caaggactgc cacagggtac cctcgcgttg ataggcaaga tcaaacagtt gttcttcggt
      601 caacccaatc aacggagatt taagaacggt tgctagcgta agatcatcct ccggcaataa
      661 tagaaactta ccaagtgcga ttaagtccat caccgccatt tgctcggtca acaccatgcg
      721 gtcgacaccg gcgacatcaa tctcaagctc tttcaaagcg cggacgaggt cctcgacaaa
      781 accggaacgg cggcgcacca gcaccattac atcacctggc tcaatcggcc gccccttggc
      841 ctccagtatt tctttgtcct tgatcatcct ggcaatgcgg ccggcaataa gccccgccaa
      901 ccgggtttgt ggcgcatcgc cccgaatacg ctcaaccggc ggtttccagg ctaccggcgc
      961 gtcagcggcg cggggttcaa ccggcggcca tagctcaact aggccacctt gttcaacacg
     1021 ccacgcttcg tggtgaataa tttcatcttc taacgtgacg ccatcgaccg cctgcgcttg
     1081 actaaagact gcgatgacag cccctaagac tgcctgggtc gagcggaacg agacggttaa
     1141 atcaattggc cgccattcct gaccggcagc ttgggcacgg ccggcgaact gatcccgcat
     1201 cgccccaaaa gtgatggggt cagcaccctg aaacgaatag atcgattgtt tgacgtcccc
     1261 gacggcaaaa atcgtccgcg gggtttcatg gctgcctaga ccggcaaaaa attcatcggc
     1321 taaggcttcg atgacccgcc attgatcgag gctggtatcc tgcgcctcat cgatcagcac
     1381 atgatcaatg ccgccatcga gtttaaacaa tacccaggga gcgacccctt ctcggtgcag
     1441 taattcaccc gccagcaata tcagatcgtc ataatcgagc agcgcacgct cttcctttag
     1501 cgcccgatag gtagccagca aagcttcacc caagaccagt aatccggcag tgctcttagc
     1561 gatgctgact gcccgccaat gccaaattgc ctgttctagg cgaataccct cagaattgag
     1621 tatatcaatc actcctggtg atttttttgc cgccggttta gtgatcaaag tcttacggac
     1681 attaaaagag gctttggtga gatcggtcag ataaatagaa gcatagtcaa aaaatgcctc
//
LOCUS       DASCNL010000082         7515 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000214723, whole genome shotgun sequence.
ACCESSION   DASCNL010000082 DASCNL010000000
VERSION     DASCNL010000082.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 7515)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7515)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7515
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000214723"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1899
                     /locus_tag="QF359_01015"
     CDS             <1..1899
                     /locus_tag="QF359_01015"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF004070.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HJO85520.1"
                     /translation="LGSVLKMFMSVPDALKPPKPVTAYSVNNDLPEIKMTKAREQVLG
                     VLKDNPPLPATLLAKEAGVGTSVIKGLAKLDALIAVELPPPAAFKIPNWQVSGPKLSL
                     EQASAAASLRAHVEAGEFYVSVLEGVPGSGKTEVYLEAVCAALAQGKQALVLLPEIAL
                     GAQWLARFKARFGCEPTEWHSDLTQTTRRKTWRAVATGEAKVIVGARSALFLPYTDLG
                     VIIVDEEHDQSFKQEDGVIYNARDMAVVRAQLGDIPISLVSATPSLESLRNVECGRYE
                     HFDLLDRYAGAELPEILIIDMRQDKPATGKWLSPNLIQGLKDTFAAGEQALLFLNRRG
                     YAPLTLCQGCGHRFQCPQCTAWLVEHRFLGRLQCHHCGYQMKPPDKCPSCDQADKLYA
                     CGPGVERLAEEVQELFPDIRAEIAVSDNLHTPTQAQELVSQIENREIDLIIGTQIVAK
                     GYHFPYLTLVGVVDADVGLTGGDIRALERTYQLLYQVAGRAGRAEHPGKVLVQTHDPE
                     NPVMQALKAGDHKGFIATMSQDRERNSMPPFGRLAGVILSSSDERAVDQAAANLARTA
                     PRDNGVMTLGPAPAPLALLRGRHRRRFLVKAGRDVNIQTRIRAWLKATELPRKVRLQL
                     DIDPYSFM"
     gene            2125..2697
                     /locus_tag="QF359_01020"
     CDS             2125..2697
                     /locus_tag="QF359_01020"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014746503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HJO85521.1"
                     /translation="MSSETTDAQTDVTGLSGRYATALFELAEGADALDQVADDLRQIS
                     TMMDESDDLIRMVRSPVIPRADQSAAMQALLEKTEASQLTRNFIGVVASNRRLFALAD
                     IIDDYLMVLAGRRGEMTAEVTSAKALTESQKADIEAALQSSVGGKVSINSTVDPDLLG
                     GLVVKIGSRMVDSSLHTKLQHLKLAMRGVG"
     gene            2697..4229
                     /gene="atpA"
                     /locus_tag="QF359_01025"
     CDS             2697..4229
                     /gene="atpA"
                     /locus_tag="QF359_01025"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HJO85522.1"
                     /translation="MEIRAAEISAILKDQIQNFGTEAEVAEVGQVLSVGDGIARIYGL
                     DKVQAGEMVEFPGGIRGMTLNLEEDNVGVVIFGDDRNIKEGDTVKRTGDIVDVPVGKV
                     LLGRVVDALGDPIDGKGPIDASERSLIEVKAPGIIPRKSVHEPMQTGLKAIDSLIPIG
                     RGQRELIIGDRQTGKTAIIVDTILNQKKVNDTAADDSEKLYCIYVAIGQKRSSVAQLV
                     KVLEENGAMEYSIVVAATASEPAPMQFLAPYTGCTMGEYFRDNGMHAVIFYDDLTKQA
                     VSYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDDNGAGSLTALPVIETQAND
                     VSAYIPTNVISITDGQIFLETDLFYKGIRPAVNVGLSVSRVGSAAQVKAMKQVAGSIK
                     LELAQYREMEAFAQFASDLDASTQQLLARGARLTEVLKQGQFSPYAMEEQVVSLFCGV
                     NGYLDGIEVRDVVRFEQAMLDSIREKGADILAAIRADEAISEETEEKLNSFLDDFTKS
                     FA"
     gene            4265..5161
                     /locus_tag="QF359_01030"
     CDS             4265..5161
                     /locus_tag="QF359_01030"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HJO85523.1"
                     /translation="MANLKELKTRISSVKSTQKITSAMKMVAASRLKRAQEAAEAARP
                     YAERMERMMTSLLDNPGSLEGAGKLLSGTGSDDTHLIVVVTSDRGLCGGFNANISRET
                     RNRLLALTGENKNAKILCIGRKGREQLKTEFKNAIVDTYEGIGKAGVQFEEAQGVAVK
                     IIEMFEAGEFDVCSIIYNKFISAITQEVTLRQIIPVQLADEDDEAETAVETGPSAIYE
                     FEPSEEEILAKLLPSNLNVQVFRALLESSASEHGARMSAMDNATRNAGEMIDDLSITY
                     NRTRQAKITSELIEIISGAEAL"
     gene            5182..6606
                     /gene="atpD"
                     /locus_tag="QF359_01035"
     CDS             5182..6606
                     /gene="atpD"
                     /locus_tag="QF359_01035"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HJO85524.1"
                     /translation="MAENNIGTVSQVMGAVVDVKFPGDLPEILNALEVDNNGNRLVLE
                     VAQHLGESQVRTIAMDTTDGLVRGTEAVDTGSPINMPVGPETLGRILNVIGEPVDERG
                     PIETKDSSPIHRAAPEFIEQSTETEVLVTGIKVVDLIEPYPKGGKIGLFGGAGVGKTV
                     IIMELINNIAKGHGGYSVFAGVGERTREGNDLYHEMMESGVIQIDGAGSKAALVYGQM
                     NEPPGARARVALSGLTVAEYFRDQEGQDVLFFIDNIFRFTQAGSEVSALLGRIPSAVG
                     YQPTLATDMGAMQERITSTHKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQ
                     IAELGIYPAVDPLDSTSRILDASIVGEEHYTVAREVQRILQTYKNLQDIIAILGMDEL
                     SEEDKQTVARARKIQRFLSQPFHVAEVFTGSPGVFVNLEDTIKGFKGICDGEYDHLPE
                     VAFYMIGTIEEAVEKAQKMAQEAA"
     gene            6619..7047
                     /gene="atpC"
                     /locus_tag="QF359_01040"
     CDS             6619..7047
                     /gene="atpC"
                     /locus_tag="QF359_01040"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HJO85525.1"
                     /translation="MADEVANKVAFELVTPTALAISEDVDMVVVPGSEGDFGVLPGHT
                     PILSTVRPGVINMYTDGVITKSLFVEGGFAEANPERCTVLAESATDVSELSSSDTEAR
                     LSAAREVYSSADDEAKEAAEKELRIAEEMVRAAGGNSTLH"
     gene            complement(7135..>7515)
                     /locus_tag="QF359_01045"
     CDS             complement(7135..>7515)
                     /locus_tag="QF359_01045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85526.1"
                     /translation="FVVATVGGHTHSTKFMLINILLWYVMLAVLAAMETKLSGFTTLF
                     IMGIVHAMGMVSMSVILVGQLEQYIRGRVIGVRILAIYGVPLGLLGTGMLIDIIGFQA
                     TINLYVGVGMALTLLIWFKWRRVL"
BASE COUNT         1831 a         1842 c         2057 g         1785 t
ORIGIN      
        1 ttgggttcag tgcttaaaat gtttatgtcc gtgcccgatg ccttgaagcc accgaagccg
       61 gtgaccgctt atagtgttaa taatgatctg ccggaaatta aaatgactaa agcgcgggaa
      121 caggttctcg gcgtcttgaa agataaccca cccctgccgg caactctatt ggctaaggaa
      181 gccggcgttg gtacatcggt cataaaaggg ctggcgaaat tggacgcgct cattgctgtc
      241 gaactgccac cacccgcagc gtttaaaata ccaaattggc aggtgtccgg cccgaaactg
      301 tcattggagc aggcgagcgc tgccgcgagc ttgcgggcgc atgtagaagc tggcgaattt
      361 tatgtcagcg tattagaggg ggtgccggga tcgggaaaaa ccgaggtgta tctcgaagcc
      421 gtttgtgcag cgcttgccca gggtaagcaa gccctggtat tactgccgga aattgcgctg
      481 ggggcacagt ggctggcgag atttaaagca cgctttggct gcgagccgac tgaatggcat
      541 tcggacttaa cccaaacgac acgccggaaa acctggcggg cggtggcgac cggtgaagct
      601 aaggtaattg tcggcgctcg ctcagctttg ttcctgcctt acaccgacct cggtgtgatc
      661 atcgttgatg aagaacacga tcaatctttc aagcaagaag atggcgtcat ttataacgcc
      721 cgtgatatgg ctgttgtgcg ggctcagctt ggtgacattc cgatctctct ggtgtcggcg
      781 acgccgtcgc tcgaatcact aagaaatgtc gagtgcgggc gctatgaaca ttttgacctg
      841 ctcgaccgtt atgccggcgc ggaactgccg gaaattttga taattgatat gcgccaggat
      901 aaacccgcca caggcaaatg gctgtcaccg aatctcattc aaggcctgaa agataccttt
      961 gccgctggtg aacaggcact gttgtttttg aaccgccgcg gctatgcgcc gctgacgctt
     1021 tgccagggct gtggtcaccg gtttcaatgt ccgcaatgta ccgcttggtt ggttgagcat
     1081 cgctttttgg gccgtctgca atgtcaccat tgtggctatc agatgaaacc accagataag
     1141 tgcccgagct gtgatcaagc tgataagctt tatgcctgtg gcccgggggt cgaacgatta
     1201 gccgaagagg tgcaggaatt gttcccggat attcgcgccg aaatcgcggt cagtgataat
     1261 cttcatacgc caacacaggc ccaggaactt gtcagccaga ttgaaaaccg ggagattgat
     1321 ttgatcatcg gtacccagat cgtcgctaag ggttatcatt ttccctatct cacattggtc
     1381 ggtgtggttg atgcggatgt cggtctgacc ggcggcgata tccgcgcctt ggagcggacc
     1441 tatcagctgc tctatcaggt ggcgggccgg gccgggcggg ctgagcatcc gggcaaagtg
     1501 ctggtgcaga cccatgaccc cgagaacccg gtgatgcagg ctttgaaggc gggtgaccat
     1561 aaaggcttta ttgctaccat gtcacaggac cgggaacgta acagcatgcc gcctttcggc
     1621 cgtttggcgg gtgtcattct ttcaagcagc gatgaacgtg cagttgatca ggcggccgcc
     1681 aatcttgctc gcacggcacc ccgcgacaat ggggtgatga ccctcggtcc ggcaccggct
     1741 ccactggctc tattacgggg ccgccatcgc cgccgctttt tggtcaaagc cggccgtgat
     1801 gtcaacatcc agacgcgaat acgtgcttgg ctcaaggcga ccgaactgcc gcgcaaggtg
     1861 cggctccaat tggatatcga tccttatagt tttatgtagc cgttataaac tgtaacctat
     1921 tgaaataacg taataaaaac agagtatccg gttggtgctt ttggcgtctt gcggactccg
     1981 aatgagtatg gtagacaacc atcgctttcc gcggagctgc ggcgtaaatt cgtttctttc
     2041 ggaaagtata attttgtttt caagttatcc tatttctgca aatgctgtct cattttcggg
     2101 aatgaagtcg aggaaaaaac tcaggtgtca tccgaaacta cagacgccca aacggatgtt
     2161 actgggcttt ccgggcggta cgccacggcc ttgtttgaat tggccgaagg cgctgatgcg
     2221 cttgatcaag ttgccgatga ccttcgccaa atcagtacga tgatggatga aagtgatgat
     2281 ctcatccgga tggtgcgttc gccggtgata ccgcgcgccg atcaatctgc tgccatgcag
     2341 gcgctgctgg aaaaaaccga agcatctcaa ctcacccgta attttatcgg tgttgttgcc
     2401 tcaaaccgcc gcctttttgc cttggccgac attatcgatg attacctgat ggtgctggcc
     2461 gggcgccgtg gtgaaatgac ggcggaagtt acctcggcca aagcccttac cgaaagccag
     2521 aaagcagata ttgaagctgc gctgcaaagc tcggtcggcg gcaaagtatc aattaattcg
     2581 acggttgatc ccgatctgct tggcggcctg gtcgtcaaaa ttggttcgcg tatggtcgat
     2641 tcgtcacttc atactaaact gcaacattta aaactcgcca tgagaggtgt tggataatgg
     2701 aaatccgcgc agcggaaatc tccgcaattc taaaagatca gatacaaaat tttggtaccg
     2761 aagcagaagt cgccgaggtc ggacaggttc tttcggtcgg tgatggtatc gcccgcattt
     2821 acggtttgga taaagttcag gccggcgaaa tggtcgaatt ccctggcggc attcgcggca
     2881 tgaccctgaa ccttgaggaa gacaatgtcg gagtcgttat atttggcgat gaccgtaaca
     2941 ttaaagaagg cgatacagtc aaacgtaccg gcgatatcgt tgacgtgccg gttggcaaag
     3001 tcttgcttgg ccgtgtggtt gacgccttgg gtgatccgat tgacggcaaa ggcccaatcg
     3061 atgcttccga acgtagcctg atcgaagtga aagcacccgg catcatcccg cgtaaatcag
     3121 tgcatgagcc gatgcagacc ggtctcaaag ccatcgatag tctaattccg attggccgtg
     3181 gccagcgtga attgatcatt ggtgaccgcc aaaccggtaa aaccgccatt atagtcgata
     3241 ccattttgaa ccaaaagaaa gtcaatgaca cggcggcgga tgattctgaa aagttgtact
     3301 gcatttatgt tgcgattggt cagaaacgct cctcggtggc acaattggtt aaagtgctcg
     3361 aagaaaacgg cgcgatggaa tattccattg ttgttgccgc aaccgcttcc gagccggccc
     3421 cgatgcagtt cctggcccct tacaccggct gcaccatggg tgaatatttc cgcgacaacg
     3481 gtatgcacgc ggttattttc tatgatgatt taaccaaaca agcggtctcc tatagacaga
     3541 tgtccctatt gctgcgccgt cccccaggac gtgaagcata tccaggtgac gttttctacc
     3601 tgcattcacg ccttttggag cgcgctgcaa aaatgaacga cgataatggt gctggttcct
     3661 tgaccgcgct tccggtcatt gaaactcagg caaacgacgt ctcggcttat attccaacca
     3721 acgtgatttc gatcaccgat ggtcaaatct tccttgaaac ggatcttttt tataaaggta
     3781 tccggcccgc tgtgaacgtt ggcttgtcgg tttcccgtgt gggttcggcg gcgcaagtga
     3841 aagcgatgaa gcaagttgcc ggctcgatca agcttgagct agcacagtac cgggaaatgg
     3901 aagcctttgc acaatttgcc tccgatttgg atgcctcgac ccagcaattg ctggcccgtg
     3961 gcgcgcgttt gacggaagtt ttaaaacaag gacagttctc accttatgcg atggaagagc
     4021 aagttgtttc cctgttctgt ggcgttaacg gctatctcga tggtatcgaa gtcagagatg
     4081 ttgtgcgctt tgaacaagcc atgctcgaca gtattcgcga aaagggcgct gacattttgg
     4141 cagcgatccg tgctgatgaa gcgatttctg aagaaaccga agagaagctt aattctttcc
     4201 tagatgattt taccaagtca tttgcttaaa gcggcgttta acttagggag tttggcgacg
     4261 aaatatggcc aatcttaaag aactcaaaac ccgtatctct agcgtcaaat cgacgcaaaa
     4321 gatcacctct gccatgaaaa tggtggcggc gtcacggtta aaacgtgcgc aggaagcagc
     4381 cgaagctgcc cggccttatg ccgaacggat ggagcgcatg atgacgtcgc tccttgataa
     4441 tccgggatcg ctagaaggtg ctggtaaatt gctcagcggt acaggttccg atgataccca
     4501 cttgattgtt gtagtaacct cggaccgggg actttgcggt ggctttaatg ctaatatttc
     4561 ccgcgaaacc cgcaatcgcc tactcgcact tacaggcgaa aataaaaacg ctaaaattct
     4621 ttgtatcggc cggaaagggc gcgaacaact caaaactgaa tttaaaaacg cgattgtgga
     4681 tacttatgaa ggtatcggca aagccggcgt tcagtttgaa gaagctcagg gtgtggcggt
     4741 caagattatt gagatgtttg aagccggcga atttgatgtc tgctccatca tctacaacaa
     4801 attcatttca gcgattactc aggaagtgac gctgcggcag atcattccgg ttcagctcgc
     4861 tgacgaagat gatgaagctg aaacagcagt ggaaacgggt ccttccgcga tctacgagtt
     4921 tgaaccttca gaagaagaaa tactggcaaa gttgttgcca tccaatttga atgtgcaggt
     4981 gtttcgcgct ctcctggaaa gcagcgcttc cgaacatgga gccaggatgt cggcaatgga
     5041 taatgccacg cgtaacgccg gtgagatgat tgacgacttg tcgattacct ataaccggac
     5101 acgtcaggca aaaattacca gtgaattaat cgaaattatt tcgggcgccg aagcgctcta
     5161 gctcaatagg agttgataac aatggccgaa aacaatattg gcacagtttc ccaggtaatg
     5221 ggtgcagtgg tcgatgtgaa atttcccggt gatttaccgg aaattcttaa cgctctcgag
     5281 gttgataaca atggcaaccg cttggttctc gaagtggcgc aacatctggg cgaatcccag
     5341 gttcgcacca tcgccatgga taccacggac ggtctggtcc ggggcaccga agcggtggat
     5401 actggcagcc ctatcaacat gccggttggc ccggaaacgc ttggccgtat tctgaacgtg
     5461 atcggcgagc cggttgacga acggggtccg atcgaaacca aggattcttc gccaatccat
     5521 cgtgcggctc ccgagtttat agaacaatcg actgaaaccg aagtgctggt caccggtatt
     5581 aaagtggtcg atctgatcga gccctatccg aaaggcggta agattggcct gtttggcgga
     5641 gcgggtgtgg gcaaaaccgt gatcattatg gaattgatca acaacatcgc caaaggtcat
     5701 ggcggttatt ccgtatttgc cggtgtcggt gaacggaccc gtgaaggtaa cgacctctat
     5761 cacgaaatga tggaatccgg cgttattcaa attgatggag ctggctccaa ggcagccttg
     5821 gtttatggcc aaatgaatga gcctcccgga gcgcgtgccc gggttgcgct gtctggtttg
     5881 acagtggcgg aatatttccg tgatcaggaa gggcaggacg tgctgttctt tattgataac
     5941 attttccgct ttacccaggc cggttccgaa gtgtctgctt tgttgggccg tataccgtca
     6001 gctgtgggct atcaaccaac gctcgccacc gatatgggag ccatgcaaga gcggattacc
     6061 tcaacccata aaggttcgat cacgtcagtg caggcgattt acgtgccggc cgatgatttg
     6121 actgacccgg ccccggctac atcctttgcc catctggatg caaccaccgt gttgtcgcgc
     6181 caaattgccg agcttggtat ttatccggcg gtggacccgc tcgattcaac cagccgtatt
     6241 ttggacgcct cgatcgtcgg cgaagaacat tacacagttg cccgtgaagt tcagcgtatt
     6301 ctgcagacct ataaaaacct gcaggatatt atcgctattc ttggcatgga cgaattgtca
     6361 gaagaagata aacagacggt ggcgcgggca cgtaagattc agcgtttcct cagccagcct
     6421 ttccatgttg ccgaagtttt caccggttcg ccgggcgtgt ttgtgaattt ggaagataca
     6481 attaaaggct tcaaaggcat ctgcgacggt gaatatgatc acttgccgga agtcgccttc
     6541 tacatgattg gcaccatcga agaagctgtc gaaaaagcgc aaaaaatggc gcaagaagcg
     6601 gcctaaagga caaaataaat ggctgatgaa gttgcaaaca aagtggcttt tgagttggta
     6661 acaccaaccg ccctcgcgat ttccgaggac gtcgacatgg ttgtcgtgcc aggcagcgaa
     6721 ggtgatttcg gtgtattgcc gggccatacg ccgattttat cgaccgtgcg cccgggcgtg
     6781 atcaatatgt atactgatgg cgtgatcact aagtctctgt ttgttgaagg tggtttcgcc
     6841 gaagccaacc cggaacgctg cacggtcttg gccgaaagtg ctacggatgt aagcgagctc
     6901 agctcaagcg acaccgaagc gcggttgtcg gctgcccgtg aagtgtattc tagtgctgat
     6961 gacgaggcca aagaagccgc cgagaaagag cttcgcatcg ccgaggaaat ggtccgcgct
     7021 gctggtggta actccactct gcattaagct ttaaaaatat cgagttcaga agaggctgca
     7081 ctgacgtgcg gagaaaatgg cgagtggggc ttccaaacca gctagtgcca ccagctaaag
     7141 cactctccgc catttaaacc aaatcagtag ggttagcgcc atgccaacac cgacgtagag
     7201 gttaatcgtt gcctgaaagc caatgatatc gatcagcata ccggtgccca aaagccctag
     7261 cggcacgccg tagattgcca atatcctaac gccgatgacc cggccgcgga tatattgttc
     7321 gagctggcca accagaataa ctgacattga gaccatgccc atggcgtgca cgatgcccat
     7381 gataaacagg gtagtaaaac cggagagctt ggtttccatc gcggctaaaa ctgccaacat
     7441 gacataccat agcaatatat tgatcagcat gaattttgtc gaatgtgtgt ggccaccgac
     7501 cgtggcaacg acaaa
//
LOCUS       DASCNL010000083         1213 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000215898, whole genome shotgun sequence.
ACCESSION   DASCNL010000083 DASCNL010000000
VERSION     DASCNL010000083.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000215898"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            757..>1213
                     /locus_tag="QF359_01050"
     CDS             757..>1213
                     /locus_tag="QF359_01050"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO85527.1"
                     /translation="MADSQSNEPPLLEVNNLFTHFDTPRGIAHAVDGVSFKLERGRTL
                     GIVGESGSGKSVLSRTIIDILAKDGSVLHKGEILFEGRDLRQLPEKEMREIRGREIAM
                     VFQDPMSSLNPVKKIGKQITEVLTKRLGMTKQGANLRAAELIESVGIPDA"
BASE COUNT          352 a          276 c          260 g          325 t
ORIGIN      
        1 ccttctcgta aagaagtgag cctctcacaa atcaactttg gcgtatttga taattgtcaa
       61 tttggctaat gggtaaaatt tagccgaaca tcgtatcggg taggaagagg gctatgtccg
      121 gaaaggtaac cagaattgcc aaacaggctg ccatggcgaa ccggaacggc cagatgccgc
      181 agaagatggt tcccattggt acatcctggc gcgatgccgc gaacgacaaa tacattaatg
      241 cttactggcg ggataatcag acccatttcc aacacaacca caatgaacac tccgaaccag
      301 atatggctca atcccaactc taacttaagc ggtggaccaa ttaacggggg caggccattc
      361 tcccaaaact gttttctatt ttttgcaaat ctataccgac cattttagcc agtacctatc
      421 ttaatggtta attaccccta acaatctaaa attcgcagtc aattaatcct accttaaatt
      481 tcaattactt taattatgtg tgacctcttt tgcgtgtgtt cgttctcacc cgcttgatag
      541 acctacttaa tattttgttt aaactaaata ataattcaga aaaaatagct gacaggactt
      601 gggcggtatc atcacccaga taattaaaaa tccgataata atattgacaa tgtggtacaa
      661 gttattaagg ctaaaaactg gcttaatgct ggggggaacg ctatttcatg accacatcat
      721 caatattgtc agtagaacta tatttagcgg ggaatcatgg cggatagtca atctaacgaa
      781 ccgcctctgt tagaggtcaa taacctcttt acccattttg atacaccacg cggcatcgct
      841 catgcggttg atggcgtttc ctttaaattg gagcgtggcc gcacgctcgg cattgttggc
      901 gaatccggtt ccggcaaaag tgttctgtca cgcaccatta ttgatatctt ggcaaaagac
      961 ggctcagttc tccataaggg tgaaattcta tttgagggcc gcgacttgcg ccaacttccg
     1021 gaaaaagaaa tgcgcgaaat ccgcggtcgt gagattgcca tggtttttca agatccgatg
     1081 tcgtcactca atccagttaa aaaaatcggc aaacagatta cggaggttct gaccaaacgg
     1141 cttggcatga ctaagcaggg agctaatttg cgggccgctg aactaatcga atcggttggc
     1201 attcccgatg ccg
//
LOCUS       DASCNL010000084         2618 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000216435, whole genome shotgun sequence.
ACCESSION   DASCNL010000084 DASCNL010000000
VERSION     DASCNL010000084.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2618)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2618)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000216435"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..952
                     /locus_tag="QF359_01055"
     CDS             <1..952
                     /locus_tag="QF359_01055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO85528.1"
                     /translation="YGGHERTALERYVVLEEALVAGAPVSAHWIAERQSGPLLLSFGS
                     EEQCHKILPGIAKGELVFCIGMSEPDSGSDLASLRSPAKRSDDGWLLNGAKVWTTNAH
                     EADYMIGLFRTSTDPDNRRGGLSQFLIDMKTPGITVNPIVDLPGREHFNEVVFEDVHL
                     SHDCLIGTEGEGWDQVTAELAYERSGPERYLSSIQILLALVDELKANPSERGTIAVGE
                     LMARLATLRAMSLSLASMLEKGQNPSLEATMVKDLGTGFEQTLPDIAQSLIDLEPDPD
                     SGSDMQMVLSFLIQAVPSFSLRGGTREILRGIIARGLGLR"
     gene            949..2010
                     /locus_tag="QF359_01060"
     CDS             949..2010
                     /locus_tag="QF359_01060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO85529.1"
                     /translation="MTNEITTLLDQTATRLFGDLVTGSTFSAAEDGVWPEQLWNALEE
                     NGLTQPLVSVENGGAGATWRDSYVIVRAAGYFSVPVPLPETIAAGYLLSQSGIQIPES
                     PLSLISPPEYGFSLTKDDQGAWRLDGVLPRVPWGRNVGYVIFSYEDMIVSVPVEGCTI
                     NKGSNVAGEPRDNLTFSNQAVEAAPGAFSSTQIGALIRAAQMAGAAERALEEAVSYAK
                     ERVQFGRTISKFQAIQQNLAVMASETAAAGCAAEMAFQAADYGEAEFEIAAAKIRNGE
                     AGDIVTATAHQVLGAIGFTREHHLNLTTRRIWSWRAEFGGASSWALKLGQATIDRGGK
                     NLWSDLTARYIDIKEYTSE"
     gene            2003..>2618
                     /locus_tag="QF359_01065"
     CDS             2003..>2618
                     /locus_tag="QF359_01065"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJO85530.1"
                     /translation="MSDFVIYEQTGKVVTLTLNSPATRNALSHEDEYLQIVESCERIN
                     RDDNVGAVILTGAGSCFCAGGNIKDMKVQNGLYSGDPLTIANKYRHNIQKIPLALYNV
                     ETPTIVAVNGPAIGAGCDLTLMCDIRLASEKAKFAESFVQLGLIPGDGGAWLLQRTVG
                     LSKAYEMAFTGDVITAQEALECGLVSKITLPEDLMTEAQKMADRI"
BASE COUNT          632 a          664 c          706 g          616 t
ORIGIN      
        1 atatggcggc catgagcgga cggctttgga acgctatgtt gtgctggaag aagccttggt
       61 cgccggcgca ccggtctcgg ctcattggat cgccgagcgc caaagtggtc cgcttttgct
      121 tagctttggc agcgaagaac aatgccataa aattctcccc ggcattgcta agggggaatt
      181 ggttttctgc atcggcatga gcgagcccga ttctggatcg gatttggcgt ccctcagaag
      241 tccggcaaaa cgaagcgatg acggctggct gttgaacggc gccaaggtct ggaccaccaa
      301 cgcccatgaa gccgattata tgatcggact attccgcacc tcgaccgatc cagacaaccg
      361 gcggggcggg ctttcgcaat tcctaattga tatgaaaacc cccgggatca cggtcaaccc
      421 aatcgttgat ttaccgggcc gcgaacattt taacgaagtg gtgttcgaag atgttcacct
      481 ctcccatgat tgcctgatcg gcacagaggg cgaaggctgg gaccaagtga cggccgagct
      541 ggcttatgaa cgatccggcc cggagagata tctaagctcc attcaaatcc tgttggcgtt
      601 ggtggatgag ttgaaagcta atcccagtga acggggcacc attgccgtcg gcgaactgat
      661 ggcccggctg gccaccctca gggccatgtc gttgtccctg gctagcatgt tggagaaagg
      721 acaaaatccg agcctggaag ccacaatggt taaagatcta ggtaccggat ttgaacaaac
      781 cctgcctgat attgctcaat ctctaatcga tctggagccg gaccctgaca gcggatcgga
      841 catgcaaatg gttctgtctt tcctcattca agcggtaccc tccttttcac ttcgaggcgg
      901 tacgagagaa attttgaggg gcatcatcgc ccgggggctg ggcttacgat gacaaatgaa
      961 ataacaaccc tcctagatca aactgccacc agattgtttg gtgatctagt aactggtagc
     1021 accttctccg cggcagaaga tggcgtttgg ccggaacagc tttggaacgc cctagaagaa
     1081 aacggcctta cccaacctct ggtctctgta gaaaatggcg gtgccggagc gacttggcgg
     1141 gacagttatg tcattgtccg cgccgctggt tacttttccg tcccggtccc attaccagaa
     1201 accatcgctg ccggttactt gctgtcgcaa tccggcatcc aaatacccga aagtcctctt
     1261 agtttgatca gtccacccga atatggtttt agtctgacga aagacgatca aggtgcttgg
     1321 cgcttggatg gtgtgttacc tcgagtcccc tggggccgga acgtgggata tgttatattc
     1381 tcatatgaag atatgatcgt atctgtgccg gtagaaggat gcaccatcaa caagggatca
     1441 aatgtagctg gtgagccgcg cgataattta accttttcaa atcaagctgt tgaagccgcg
     1501 cccggtgcgt tttcttcaac tcaaattggc gctttaatcc gcgctgccca aatggccggg
     1561 gcggcggaac gagctttaga agaagcggtc agttatgcca aggagcgagt tcagttcggt
     1621 cgcactatta gtaaattcca agccattcag cagaatttag ctgttatggc atcggagact
     1681 gccgccgccg gttgcgccgc cgaaatggct tttcaagcgg ccgattacgg tgaagccgag
     1741 ttcgaaatcg ccgctgccaa aatacgaaac ggagaagccg gagatatcgt caccgcgaca
     1801 gcccatcagg ttctgggcgc cattggcttt acccgtgaac atcacctgaa tttaactact
     1861 cgccgcatct ggtcgtggcg ggccgaattc ggtggcgcca gtagctgggc attaaaatta
     1921 ggtcaggcaa caattgaccg cggtggcaaa aacctatggt ccgatttaac ggcgcgttat
     1981 attgatataa aggaatatac cagtgagtga ttttgtgatt tatgagcaaa ccggtaaggt
     2041 cgtaaccttg accttgaaca gccctgcgac tcgtaatgca ctaagccatg aagacgaata
     2101 ccttcaaatc gttgaatctt gcgagaggat caaccgggac gacaacgttg gcgcggttat
     2161 tttgaccggt gcgggttcct gcttttgcgc cggtggcaac atcaaagata tgaaagtaca
     2221 aaatggcctt tattccggcg accctttgac catcgccaac aaatatcgcc ataacatcca
     2281 aaaaatacca ctggctcttt acaatgtaga aacaccaacc attgttgctg taaatggtcc
     2341 ggctattggc gccggctgtg atctgacctt gatgtgcgat attcgcttgg cctcagagaa
     2401 agccaaattc gccgaatcct ttgtgcagct tggtcttatt cctggcgatg gtggggcttg
     2461 gttactgcag cggactgtcg gactttcaaa ggcctatgaa atggccttta cgggcgacgt
     2521 cataaccgct caagaggccc tggaatgcgg tctggtctcc aaaatcacgc tgccggaaga
     2581 tcttatgacc gaagcccaaa aaatggcgga tcggattg
//
LOCUS       DASCNL010000085         1785 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000218048, whole genome shotgun sequence.
ACCESSION   DASCNL010000085 DASCNL010000000
VERSION     DASCNL010000085.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000218048"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="QF359_01070"
     CDS             <1..235
                     /locus_tag="QF359_01070"
                     /inference="COORDINATES: protein motif:HMM:NF013033.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004800 - thyroxine 5'-deiodinase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="deiodinase-like protein"
                     /protein_id="HJO85531.1"
                     /translation="GTDDERTEIATVCQQMMDLQMPMLIDSIDNDAESKYISIPMRLY
                     LVNADGMLNYVGGEGPFNFKPDEFEAAIKEIIA"
     gene            complement(360..1064)
                     /locus_tag="QF359_01075"
     CDS             complement(360..1064)
                     /locus_tag="QF359_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO85532.1"
                     /translation="MLKVQDVDLYYGDAQALEDINLHIKEGEIVAIIGANGAGKTSLI
                     QAIAGIHTPSKGSITFRDSDITRLQSSAICELGVGQVAEGRQIFPGMTVQENLEMGAV
                     IKRARTKEAETLDRVFEMYPILKERQTQAAGTLSGGEQQMLAIGRCLMGQPNLIMFDE
                     PSLGLAPAIVQEVFRTIHQLNGAGLTIILVEQNVAVSLKLANRAYVLENGRMTLEGSG
                     EELLHDDRVRQAYMGL"
     gene            complement(1064..>1785)
                     /locus_tag="QF359_01080"
     CDS             complement(1064..>1785)
                     /locus_tag="QF359_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO85533.1"
                     /translation="FLEIENVSKSFRGLKAVSNVSLNVEEGGMVALIGPNGAGKTTLF
                     NLIAGVFPADEGRITLAGNDILGLRPDQICDAGISRTFQLVKPFPDMTVLENVTVGAL
                     HGAQNIQEARKAARNNVELLDLANKIHLPAHSLTLPDRKRLEVARALATRPKLLLLDE
                     VMAGLRPTETDEMVAVFKSLNQETGITILLIEHVMRAVMSLSHHVAVLHHGKKISEGT
                     PGHITQDPEVLDCYLGEEEDV"
BASE COUNT          413 a          465 c          453 g          454 t
ORIGIN      
        1 agggacggac gatgaacgca cagaaatcgc cacggtttgt cagcagatga tggatttaca
       61 gatgccgatg ttgatcgatt caatcgataa tgacgctgag agtaaatata tttccattcc
      121 gatgcggctt tatctcgtca atgctgacgg catgctgaac tatgtcggtg gtgaagggcc
      181 gtttaacttt aaacctgacg aatttgaagc agcgataaaa gagataattg cttaatataa
      241 aattccgccg ccatcgacgg ccagggtttg accggtcatg tggtcactgt cgctggcggc
      301 gaaatagacc aaagtgccgg ttaaatcttc cgcccggacg tgttgccgaa gtgctcgccc
      361 taaagcccca tataagcttg gcgcacccgg tcatcgtgga ggagctcttc gccactgcct
      421 tcaagagtca tgcggccgtt ttccagcaca taggcgcggt tggctaattt taatgacacc
      481 gcaacattct gctcgaccaa tatgatggtg aggccggcgc cgttcaactg atggatggtc
      541 cgaaatactt cctggacaat ggccggcgcc aatccaaggc taggttcgtc gaacatgata
      601 agattaggct gtcccatcag gcagcggccg attgccagca tttgctgttc gccgccggaa
      661 agagtacctg ccgcctgggt ctgccgctct ttcaagatcg ggtacatctc aaaaacccgg
      721 tccaatgttt ccgcttcctt ggtacgagcg cgtttaatga ccgcgcccat ttctagattt
      781 tcctggacgg tcatcccggg aaatatttgg cgaccttcgg ctacctgacc gacgcccagt
      841 tcgcaaatgg cgcttgattg caggcgggtg atgtcactgt ctcgaaatgt aatggaacct
      901 tttgacgggg tatggatacc cgcaatggcc tgaatcagtg atgtcttacc ggcaccgttc
      961 gccccaatga tggcgacaat ttcaccttct ttgatatgca agttaatgtc ttcgagcgct
     1021 tgggcatcac cgtagtaaag atcaacgtct tggactttaa gcatcagacg tcttcctctt
     1081 caccgagata acaatccaga acctctgggt cctgggtgat atgtccgggt gttccttcgc
     1141 ttattttttt gccatgatgt agcactgcga catgatgcga caaagacatc accgcccgca
     1201 tgacatgctc gatcagtaaa atagtaatgc ctgtttcctg gttgagcgat ttgaataccg
     1261 cgaccatttc atcggtttct gtcggtctta atcccgccat tacttcatcg agtaaaagca
     1321 attttggtcg agtcgccaaa gcccgggcaa cttctaaacg cttgcggtcc ggcaaggtca
     1381 gactatgggc tggcaagtga attttattgg ccagatcaag cagctcgaca ttattgcgcg
     1441 ccgccttccg cgcctcctgg atattctggg cgccatgcag ggcgccgact gttacatttt
     1501 ccaaaaccgt catatcggga aagggtttga ccagctggaa tgtccggcta ataccggcgt
     1561 cacatatctg atccggcctc agccctaaaa tatcattgcc ggccagggtg atgcgtcctt
     1621 catcggcggg gaaaacgccg gcgatgagat tgaataaggt cgttttaccg gcgccgtttg
     1681 gcccaatcag cgccaccatg ccgccttctt caacgtttaa ggatacgttg gaaacggcct
     1741 tcaatccccg aaagcttttg ctgacatttt caatttcaag gaagg
//
LOCUS       DASCNL010000086         1148 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000219021, whole genome shotgun sequence.
ACCESSION   DASCNL010000086 DASCNL010000000
VERSION     DASCNL010000086.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1148)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1148)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000219021"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="QF359_01085"
     CDS             complement(<1..335)
                     /locus_tag="QF359_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter subunit D family
                     protein"
                     /protein_id="HJO85534.1"
                     /translation="MSALFSAHLPAIQVVVPLISAPLCVLFRRTGATWLIALIVSWAS
                     FGISILLLEQVIANGPISYLLGSWAAPWGIEYKVDMLSAFVMLIITSIGSISMIFAPN
                     SVNSEIPEDR"
     gene            complement(335..691)
                     /locus_tag="QF359_01090"
     CDS             complement(335..691)
                     /locus_tag="QF359_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014416118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter subunit C"
                     /protein_id="HJO85535.1"
                     /translation="MEIPGLLNYWIVIVLIMVGFYVVISQGNLVKKMVGLSVFQVAVF
                     VLYISMSKIDGGAAPILDGAIKNYSNPLPHVLILTAIVVGVATTALGLALIVRIRDAY
                     GTIEEDEILEQERNDS"
     gene            complement(695..1111)
                     /locus_tag="QF359_01095"
     CDS             complement(695..1111)
                     /locus_tag="QF359_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit B"
                     /protein_id="HJO85536.1"
                     /translation="MNDHSILRVVSKIMIPFILLFALYVQFHGDFGPGGGFQAGVIFA
                     SAFILYGLIFGIENARKVLPANATRILLACGVILYAGVGVAGMFLGGNYLDYNVLAAT
                     ATGGQHLGIFLVEFGVGTTVAATMVTIFFVFAGQDF"
BASE COUNT          351 a          282 c          277 g          238 t
ORIGIN      
        1 cggtcctccg gaatttcgct gttaacactg ttaggagcaa aaatcatact gattgatcca
       61 atgctggtga taatcaacat gacaaaggcc gataacatat cgactttata ttcgatgccc
      121 cagggtgccg cccagctgcc aagcagataa gaaattggcc cattggcgat cacttgttcg
      181 agcagtagga ttgaaatacc gaaggaagcc caagaaacaa tcagcgcgat caaccaagtt
      241 gcgccagtgc ggcggaacag cacgcaaagc ggtgcagata taaggggtac caccacctgg
      301 atagcgggca gatgagcgga aaagagagct gacatcagct gtcattcctt tcttgctcga
      361 gaatttcgtc ttcctcaatc gtgccatagg cgtcgcgtat gcggacgatt aaggcgagtc
      421 ctagcgccgt cgttgccacg ccgacgacaa tggcggtaag gatcaagaca tggggaagag
      481 ggttggaata atttttgatt gcgccatcaa gaatgggtgc cgcgccgccg tcgattttac
      541 tcattgaaat atagagcaca aaaaccgcga cttgaaagac gcttaaaccg accatttttt
      601 tgaccagatt gccttgcgag atgacgacat agaagcccac cattatcagc acaatcacaa
      661 tccagtaatt taaaaggccc ggtatttcca tggtttagaa atcctgccca gcaaaaacaa
      721 aaaagatggt gaccatggtt gcggcgaccg ttgtgccgac accaaactca accaggaaaa
      781 tgccaagatg ttggccgccg gtagcggttg cggccaagac attgtaatca agataattac
      841 cgccaaggaa catgccggcg acaccaacgc cggcgtatag aattactcca caagccaaca
      901 aaatccgggt tgcatttgcc ggtaagactt tgcgggcatt ttcaatacca aaaatcagac
      961 catacaaaat aaatgctgaa gcaaaaataa cgcccgcctg aaagccgcca ccggggccaa
     1021 aatcaccatg aaattgcaca taaagggcaa atagcaggat gaatgggatc ataatcttag
     1081 aaaccacgcg gagaatggaa tgatcgttca tacttcttcc tcccggtctt caggcgcaac
     1141 gggttttc
//
LOCUS       DASCNL010000087         2934 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000223591, whole genome shotgun sequence.
ACCESSION   DASCNL010000087 DASCNL010000000
VERSION     DASCNL010000087.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2934)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2934)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000223591"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            14..778
                     /locus_tag="QF359_01100"
                     /pseudo
     CDS             14..778
                     /locus_tag="QF359_01100"
                     /inference="COORDINATES: protein motif:HMM:NF014757.3"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
     gene            920..1180
                     /locus_tag="QF359_01105"
     CDS             920..1180
                     /locus_tag="QF359_01105"
                     /inference="COORDINATES: protein motif:HMM:NF012928.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HJO85537.1"
                     /translation="MINTGAMVLEEGLAIRAADIDVVWHYGYGFPRYWGGPMFYADLI
                     GLSKIYEKVCELHERYGDWVMPSALLKSLAEEGKGFGDYTLS"
     gene            complement(1567..2280)
                     /locus_tag="QF359_01110"
     CDS             complement(1567..2280)
                     /locus_tag="QF359_01110"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HJO85538.1"
                     /translation="MTQQSSSDWHSSPKRSHADIIEELLEPNGAKTIDVGCGAGKITR
                     LLTEMGAEVTGIDPGERQLARARAATPVGNETFVEGVAENLPFDDQSMDIVLFFNSFH
                     HIPKNDLAAAIKETHRVLRPGGKLYFAEPVADGPQFEMSRLINDETEIRAFAYGVIKS
                     VPENGFKTITEITYITENRHENFESFKTNSTSINPARDAIFEKYDQEIREQFERFSRK
                     ENGQYIFDLPIRGNLFARL"
     gene            complement(2295..>2934)
                     /locus_tag="QF359_01115"
     CDS             complement(2295..>2934)
                     /locus_tag="QF359_01115"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HJO85539.1"
                     /translation="ETFGRYFPEAVTASIIENKGEFKAQHRVAKILYTDIEAFTTICE
                     SLSPDDVVNLLNEYFSLLVEIINRHGGVVNQFQGDAMLVTFNIPVVDANHAADAVQTA
                     VEIQLALAEHIFCYGEKMVTRIGVNTGNVVAGSVGVNDRLNYTVHGDAVNVAARLDNL
                     NKEFSSRVMISEETKSLAEYKWDSIVDFNAKGELLIRSKSEAVKVYEVISKS"
BASE COUNT          775 a          654 c          684 g          821 t
ORIGIN      
        1 cggcggtatt gcgatgaatt tcgccaatgc cggcattcct gtcgtcgtcg tcgatatcgc
       61 ccaggatgta cttgatgccg ggcttgagaa agtaaaagcc aactatgccg gttcggtttc
      121 acgtggtcgg attacccagt aaaaaatgga tcaatgtatg agcctgatct cgggtaccac
      181 tgattatgct gatctggcgg atgttgatat tgttattgaa gccgtctttg aagagataga
      241 gctaaagaag aaaattttcg ctgagctcga taaagtctgt aaaccggaag caatattggc
      301 aagtaatacg tcgacgttgg atatcaatga aattgccaca tccacgaacc ggccggacaa
      361 agtttgcggc actcatttct ttagcccagc taatatcatg aagctgatgg agaatgtcag
      421 aaccaaagac agctccaagg aaaccattgc gacgattatg ggactcgcca agacaattcg
      481 taaaattggc gtgttggttg gcgtgggtga tggctttgtc ggcaatcgaa tgcttcaccc
      541 cgcagcccgc attgctgaat ttatggtcga agaaggtgcg ttgccgtggc agattgacaa
      601 agtcatctat gatttcggct tccccatggg accattcgcc atgaatgatc tggctggtgt
      661 cgatgtacgt tatctagtgc gccagcaaca gaaaaaactt tatggcgacc gtcgccaatc
      721 ggttattctc gaccggcttt acgagactgg ccgctatggt cagaaaacaa aagctggctg
      781 gtacaaatat gaagatggca gccgcaaagg tgagcctgat tcgtttactg aagaattaat
      841 catcaaaact tccgctgagt tgggctttga gcgtcgcgat ttttcagatg aagagattct
      901 cgagacgtat ctttattcaa tgataaatac cggcgccatg gtgctggaag aggggttggc
      961 aattcgtgcc gcggacatcg acgtggtgtg gcactacggc tacggcttcc cacgctattg
     1021 gggcgggcca atgttctatg ccgatttgat cggcttgtcg aagatatacg aaaaagtctg
     1081 cgagctgcat gaacgctacg gcgattgggt catgccatcc gctttgctga aatctctagc
     1141 cgaagaaggt aagggatttg gggattacac actctcataa actgagggtg ttcagtcttg
     1201 ctagcaggtt ttgcatcctg tcacgatagg attgccaacg gccaatatac ttttgccaat
     1261 ttccctttta gcttctgtcg accgtcacaa taacttttgc gtgggactta ctctaccact
     1321 caacatcgag caatttatcg cactttgcca cttcgacagg tttgggtaaa ataattaaaa
     1381 aggaactggt aattaaacta aaaagagata ataaaataat ttttttctag atcatactcg
     1441 catactattt taggcagaaa tctgccgttt ctgtggactt tatgtaggtt atgtaaagat
     1501 ctattttaat tgtggaatac cacagcatat aagaataaag gggtatgcgt tagggggcgt
     1561 gcgccgttaa agccgggcaa ataaatttcc gcgtattggc aggtcaaaaa tatactggcc
     1621 gttttctttg cggctaaacc tttcaaattg ttcgcgaatt tcctgatcat atttttcgaa
     1681 tatggcgtct cgtgcaggat taatcgacgt cgaattggtt ttaaaagact cgaaattttc
     1741 gtgtcggttt tccgtgatat acgtaatttc cgtaatggtt ttaaagccat tttcgggaac
     1801 cgatttaatt accccatacg cgaaagcgcg aatctcggtt tcatcattta tcaaacggct
     1861 catttcaaac tgcggcccat cggcgaccgg ctcagcaaaa taaagcttac ctccaggtcg
     1921 aagcacccgg tgagtttctt taatcgctgc ggctaggtca ttttttggaa tgtggtgaaa
     1981 gctgttgaaa aatagtacaa tatccatcga ttgatcgtcg aatggcaaat tttcagcaac
     2041 gccctcgaca aaggtttcat tgccaactgg tgtagcggcg cgcgcccgcg ccaattggcg
     2101 ctcaccaggg tcaataccag taacctcagc gcccatttcg gttagcagcc gggtaatctt
     2161 acctgcacca catccgacat cgatagtttt agcgccattt ggttctagca attcttcgat
     2221 aatatcagca tgagatcgtt tggggctgct gtgccaatct gatgaactct gttgggtcat
     2281 tcaataccaa tcctctaact tttacttatt acttcgtaaa ctttaaccgc ttctgactta
     2341 ctccgaataa gtaattcacc tttggcatta aaatcaacaa ttgaatccca tttatattca
     2401 gccagacttt tagtttcttc agagatcatt acgcgcgagc taaactcctt gttgaggttg
     2461 tccaagcggg ctgcaacgtt tacggcgtca ccatggaccg tgtaatttaa gcgatcattg
     2521 acgcctactg atccggcgac aacattgccg gtattaacgc cgatccgggt gaccatcttc
     2581 tcaccgtaac aaaaaatgtg ttcggctaag gccagttgaa tttcaactgc ggtctggacc
     2641 gcatctgccg catgattggc atcgaccacc ggtatattga aggtcaccag catggcatcg
     2701 ccttggaatt gatttacgac gccgccatgg cggttaataa tctcaaccaa aagagaaaaa
     2761 tattcgttga gtagatttac cacatcgtca ggggacaggc tttcacaaat cgtcgtaaaa
     2821 gcttctatgt ccgtataaag tatcttcgcc actcggtgtt gcgctttaaa ctcaccttta
     2881 ttttcgataa ttgaggcggt aaccgcttca gggaaatagc gaccaaaagt ctct
//
LOCUS       DASCNL010000088         4121 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000224624, whole genome shotgun sequence.
ACCESSION   DASCNL010000088 DASCNL010000000
VERSION     DASCNL010000088.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4121)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4121)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4121
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000224624"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            726..1469
                     /locus_tag="QF359_01120"
     CDS             726..1469
                     /locus_tag="QF359_01120"
                     /inference="COORDINATES: protein motif:HMM:NF012273.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO85540.1"
                     /translation="MILYCFPQSTCSQKVRLALWEKNIPFEERHVDHKNREQLSEWYL
                     KLNPNGVVPTLIDGDDVIIDSSVILEYLEEVYPDHPMSPNNPVDRAHMRKWLRYLEEV
                     PTPAIRIPSFNKHLSKRYEDMDDTSYHAMADKHPVRKHFYKRMNKTGFGTKETEEALD
                     RLDGAAQRVADTMDGHGKDWIIGDMHSVVDAAYMPTVDRMIDLGLGDMIKRRPSLKSW
                     YDRYSARDSFLKTFYQGTRLTEIFGKDIA"
     gene            1500..3098
                     /locus_tag="QF359_01125"
     CDS             1500..3098
                     /locus_tag="QF359_01125"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJO85541.1"
                     /translation="MANKPNFLFIITDQHKADHLGCYGNPIVRTPNIDSLSQSGLTFD
                     RFYAASPICMPNRATLMTGRMPSNTGVRFNGVPLSTEHVTFVELLRAAGYRTGLVGKC
                     HLQPMMDIPLSDPYFWTDSPTETPLSPDHIIAQRNSLDGPEYDQERAGVWAANPEHEP
                     ITPYYGFDHLKFANFHADLVHGHYRRWLDEKHPDPDTLRGPENALKDHSYSVKKGWRT
                     QMPEELYPTTYVAEETISFLNDYAEDSSAEPFFLQCSFPDPHAPLTPPGRYWDLYDPE
                     EVELPESFDHVDAQEPSFIHRIRESHGQPKKVPAPITPDEKEAREMIALTYGSVTMID
                     DAIGRILNALDDLSLSENTVVIFTADHGDMGGEHGLFGKFGVHYEAVLRVPFIWNDPE
                     QASEGRTDMLGGTIDIGSSILARAGVANTYGVQGVDIVSHARTDTSPERTGIISEEDQ
                     VSEQVNGMGAQRIWTYIHENWRLSIWIGDDTGHLFDREIDPEETNNLWYDPACATKKS
                     ELMELLLRERMRIDDTLPLTTRFA"
     gene            complement(3357..>4121)
                     /locus_tag="QF359_01130"
     CDS             complement(3357..>4121)
                     /locus_tag="QF359_01130"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO85542.1"
                     /translation="RQRPFIIIEALSYAGLTFGRLLMAIAVVGIVVAVLGATGLPKDF
                     VVLIDAVSGGSLFLTLLVTSVAALMLGMGMPTLPAYLTIVLILGPAMQNLGLTVLAAH
                     LFVLYYAVASSITPPVAIAAYAAASIAEAPPIRTAMMALRVGLVKFAIPFVFAYYPVI
                     LIVPVVFPEGSSFQMVDFLTVLFRLLIFIYLISSAVIAFDQRRLPILETGLRIALAIL
                     VMVTVPGIHWTATVIALAYIAWHQFAYSRQAAPTAN"
BASE COUNT         1114 a         1023 c         1033 g          951 t
ORIGIN      
        1 agcgtttttt ctaggtttca gcatctgcgt ttttccacac acccaaggct tcagatcgat
       61 attgtttaaa agttgttcga ttgagcaaat gtcgctgaag atagaaagtg ttgtaggttg
      121 cagattgaaa actcagaaat cgttgagccg acccgggtga tttgaaacgc tgcatctttc
      181 gctctcgtca tcgaacaggt tgatgagaat tttccgcacg attattggat cgcttattat
      241 cgatatgctc tgccgataaa ccaatagttc taaatgcaac gtgatagtat ctgatcttgc
      301 ccgttacaat gcgtgttagt gcgcaactct gttccttcaa aagctttcgc atcaatttga
      361 tagccacttt ggcgttgcgc cagggctgca ccaaaaagtc gaggacttca ccttcgttat
      421 ctacggcacg ccatagccaa tgctaacgca tcgaaaccgt attcaccaca gagttaacgt
      481 gacaacactc acaatcaatt tagaaagtgt tgagattgat acgtttatac gtgtgggtgt
      541 ttgaaaatga tgacataata aaagctgaat tggagggcca aacgtgatca gcgtatttgc
      601 tttgatgctt atcagttttg tgacaattga cacggcgcaa gcacaagaat tcagccagga
      661 ttaacgccgc gcaattattc aaagtctctc ggatgaaaaa caacaggata aggccagtgg
      721 tggatatgat cttgtactgc ttcccgcaat cgacctgtag tcaaaaggtt cggcttgcac
      781 tgtgggaaaa aaacattcct tttgaagaac ggcacgttga tcacaaaaac cgtgaacaac
      841 tgtcagaatg gtatttaaag ctaaacccaa acggcgtggt ccccaccctg attgatggag
      901 acgacgtgat aatcgattca tccgtcatcc ttgaatattt agaggaagtc tatcctgatc
      961 atccaatgtc ccccaacaat ccagtggacc gcgctcatat gcgcaagtgg ctgcgttacc
     1021 tggaggaagt tcctacacct gccatccgta ttccgtcttt taacaaacac ctctcaaagc
     1081 gatacgaaga catggacgac acctcctatc acgcgatggc ggataaacat cctgtccgga
     1141 agcatttcta taagaggatg aacaaaactg gttttggcac gaaggaaaca gaagaagcat
     1201 tagaccgcct cgatggcgct gcgcagcgag ttgcagacac gatggacggt catggaaagg
     1261 actggattat tggcgacatg catagcgtag tagatgcagc atatatgcct accgtggacc
     1321 gtatgattga tcttggcctt ggcgacatga tcaaaagacg gccttcgctt aaatcttggt
     1381 acgaccgata tagcgcgcgc gattcgttct tgaaaacttt ctatcagggt acccgcctaa
     1441 ccgaaatatt cgggaaagat atagcataga aaatccgcca ttttttgaga gtattgcgta
     1501 tggccaataa accgaacttt ttgttcatca taacggacca acacaaagca gatcacttgg
     1561 gatgctatgg caacccgata gtgcgaacgc caaatattga tagcctgtcc caatcgggtc
     1621 tgacattcga tcgtttctac gccgccagtc cgatctgcat gcccaaccgg gcgacgctca
     1681 tgactgggcg gatgccatcc aacacagggg tccggtttaa cggggtgcct ctctccaccg
     1741 aacacgtcac ctttgtcgaa ttgctgcggg ctgccggata caggactggt cttgtcggaa
     1801 aatgtcatct tcagccgatg atggatattc cactgagcga tccttatttt tggaccgatt
     1861 caccaaccga aactccgctg tcgccagatc atattatcgc ccaacggaat agtttggatg
     1921 gccccgaata cgaccaggaa cgggcgggag tatgggccgc caacccagaa cacgagccaa
     1981 taacgccgta ctacggattc gatcatctca agttcgccaa cttccatgcc gatctcgtgc
     2041 acggacatta ccggcgatgg ttggatgaaa aacatcccga tcctgacacc cttcgcggac
     2101 ccgagaatgc actcaaggac cattcatata gcgtcaaaaa aggttggcgc acgcagatgc
     2161 cggaggaact ctatcccaca acctacgtag cggaagagac tatttctttt ttgaacgact
     2221 atgcagaaga ttcatcggcg gaaccgtttt ttctacaatg ttcgtttccc gatccccatg
     2281 cgccgctgac accgccgggt cgttactggg acctttatga tcctgaagag gtcgagctac
     2341 cggaatcttt cgatcatgtc gatgctcaag aaccatcgtt cattcaccgc attcgagaaa
     2401 gccacggtca gccgaagaag gttcctgcac ctatcacgcc ggacgagaaa gaagcgcggg
     2461 agatgatcgc tctaacttac ggctcagtca ccatgattga tgacgccatt ggcagaatac
     2521 taaatgctct cgacgatctg tccttgtcgg agaataccgt cgtcatattt actgctgacc
     2581 acggcgacat gggcggcgaa cacgggctat ttggcaaatt cggggtgcac tacgaagccg
     2641 ttctgagggt tccctttatt tggaacgatc cagaacaggc ctccgagggc cgaaccgata
     2701 tgttgggagg aacgatcgac atcggctcca gcattctggc gcgggctggc gttgccaata
     2761 cctatggggt gcagggagtc gatattgtct cccacgcccg aaccgatacg tcgccggagc
     2821 gaactggtat tatttccgaa gaagaccaag tcagcgagca ggttaatggt atgggggcgc
     2881 aacggatttg gacgtatatc cacgaaaatt ggcgcctcag tatatggatc ggagacgaca
     2941 caggtcattt atttgaccgg gaaatcgatc cggaggaaac aaacaatctc tggtatgacc
     3001 cggcatgtgc gacgaaaaaa tccgaactta tggaattact gctgagagag cgcatgcgaa
     3061 ttgatgatac tctgccgtta actacgcgct ttgcttgacg gcagactttg ttggacatga
     3121 tgccaatcat tggaaaatgt tttaatgtcc cctaatggct atgtgtccgt catcaaaaca
     3181 tttgggactg ttgagttggt tttgtagaag aggatctgga tccatgtcat tacccaaggg
     3241 gcaaacgcca cccacccata agcctttctt ctttgaagcg gtaatctgtt ctcagatacg
     3301 ctcggcggtt acctcctgct caaactgggc aaatgacagc agcacataaa gagcacctaa
     3361 ttagccgtag gagccgcctg tcgactatag gcgaattgat gccaggcaat ataggccaag
     3421 gcgattaccg tcgcggtcca atggattccc ggaaccgtta ccatgaccaa aatcgcaaga
     3481 gcaatccgga gcccggtttc caatattggc agccgccgtt ggtcaaaggc gataaccgcg
     3541 cttgagatca aatagataaa gatcagtaat cggaacaaaa ccgtcagaaa atcgaccatc
     3601 tggaagctgc ttccctccgg gaaaactact ggcacgatca ggattaccgg gtaataggca
     3661 aagacgaacg gtatggcgaa tttcaccagt ccgacccgga gcgccatcat ggcggtgcgg
     3721 atgggcggcg cttcggcaat cgaggcggct gcataggcag cgatcgctac cggcggtgtt
     3781 atggatgaag caacagcgta gtagagcaca aacaagtgag ccgccaaaac cgtgagccca
     3841 agattctgca tggcaggccc aagtatcagg acgatggtaa ggtaggctgg caatgttggc
     3901 atgcccatgc ctagcatgag tgccgctaca ctggttacca gaagggtaag gaaaaggcta
     3961 ccgccggaaa cggcgtcgat cagaacgacg aagtcttttg gcaatccggt tgctcccaac
     4021 accgcgacga cgatgccaac gacggcgatc gccatcagca gtcggccgaa ggtcaggcca
     4081 gcataggaca gcgcttcaat aataataaaa ggccgttgcc g
//
LOCUS       DASCNL010000089         1396 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000227792, whole genome shotgun sequence.
ACCESSION   DASCNL010000089 DASCNL010000000
VERSION     DASCNL010000089.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000227792"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..479)
                     /locus_tag="QF359_01135"
     CDS             complement(<1..479)
                     /locus_tag="QF359_01135"
                     /inference="COORDINATES: protein motif:HMM:NF024923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HJO85543.1"
                     /translation="MRKSTIFFSLGVVGLLAVGVYFWNGQESTEIGYRIAKVERGNII
                     KSVSASGELNAVVTVEVGSEISGQISELTVDFNSDVKAGQVIARIDPESFEARVKQAE
                     AGLAVAKALVATRQAAVAQALANQANATSVLAAAGADVSRTKVNAADLKQEFERKQTL
                     "
     gene            complement(508..1026)
                     /locus_tag="QF359_01140"
     CDS             complement(508..1026)
                     /locus_tag="QF359_01140"
                     /inference="COORDINATES: protein motif:HMM:NF025173.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HJO85544.1"
                     /translation="MTKLTSRRWAIIFFISLALNVFLGGLLVADKYFKGHRGAGFRGN
                     VYSMPWARRVLGDEVHPMMRQIFRERREGFRGNRRARAELYNNVSAALAKEPFDQAEL
                     KQALGALQANLQAGHTAMNDMMAEFSSKLTTDQRKQLVQAVAKWQERRRARFEHRRQR
                     RLERQKEKQPAK"
     gene            complement(1026..>1396)
                     /locus_tag="QF359_01145"
     CDS             complement(1026..>1396)
                     /locus_tag="QF359_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85545.1"
                     /translation="YRDQEDFEFVQNLFDQVEPERATPELKAEILRRAPSGILHRSTN
                     GVSVGGKFKSDLAELIDYLWPFGALWRPVTGLVAAAMFGIMFGVTDPLSTNGVQNADE
                     ALTEEIMAFAVEVEGQLEDL"
BASE COUNT          334 a          386 c          331 g          345 t
ORIGIN      
        1 agcgtctgct tgcgttcaaa ttcctgtttg agatcagcgg cattaacctt agtgcgcgat
       61 acatcggctc cggcagcggc caaaacagag gtagcgtttg cctgatttgc cagagcttga
      121 gcgacggcgg cctgcctggt cgccaccaat gccttggcga ccgcaagccc agcttcggct
      181 tgctttaccc gggcttcaaa gctttccgga tcaattctgg cgatgacttg accagctttc
      241 acgtccgaat tgaaatctac tgtcagctct gaaatctggc cggatatttc cgagcctact
      301 tcaaccgtga caaccgcatt taactcaccc gacgcggata ctgatttaat gatgttgccg
      361 cgctcaacct tggctatccg gtagccgatc tcggtgcttt cctgaccgtt ccagaaataa
      421 acaccgaccg ccagcaagcc gacaacaccg aggctgaaaa aaatggtgga tttgcgcata
      481 attgactaac ctatatgact tgtttgatta tttggccggc tgtttctctt tttggcgctc
      541 aagccgtctt tgccggcggt gttcaaaacg ggcgcggcgg cgttcctgcc atttggctac
      601 agcttgaacg agttgtttgc gttgatcggt ggtcaatttt gatgagaatt ccgccatcat
      661 atcgttcatt gccgtatgac cggcttgaag attggcctgc aaggcgccaa gtgcttgctt
      721 taattcagcc tgatcaaacg gctccttggc gagcgcggcg gagacgttat tataaagctc
      781 tgcccgggcc ctgcgattgc cgcgaaagcc ctcgcgacgt tcacgaaaaa tctggcgcat
      841 catcgggtga acttcatcac cgagcacacg gcgggcccac ggcatcgaat aaacattacc
      901 gcgaaaaccg gcacctcgat gacctttgaa atatttatcg gcgacgagca agccacccag
      961 aaaaacgttt agggcgagtg aaatgaaaaa gataattgcc catcgccggg acgtaagttt
     1021 ggtcattaga gatcctccaa ctggccttca acctcgaccg caaaagccat gatttcttcg
     1081 gttaaggctt catccgcatt ctgcacgccg ttggtcgata gaggatcagt tacaccaaac
     1141 ataataccga acattgccgc cgctacgagg ccggtaactg gccgccataa cgcgccaaag
     1201 ggccaaagat aatcaattaa ttcggccaga tctgacttaa acttgccgcc aacgctgacc
     1261 ccattagtgc ttctgtgtaa aattcccgac ggcgcccttc tcaaaatctc agcttttaat
     1321 tcaggtgtcg cccgttccgg ttcaacttga tcaaacagat tttggacaaa ttcaaaatcc
     1381 tcctgatctc tatatt
//
LOCUS       DASCNL010000090         1796 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000229208, whole genome shotgun sequence.
ACCESSION   DASCNL010000090 DASCNL010000000
VERSION     DASCNL010000090.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000229208"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            284..1198
                     /locus_tag="QF359_01150"
     CDS             284..1198
                     /locus_tag="QF359_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO85546.1"
                     /translation="MTDSPTISKPQSGSQESPKNYWIAAMPATFVFLWSTGFIGAKYG
                     MPYTEPFTFLSVRFLLVIGLMLLLSFITKAPWPTSIKMAIHIAIAGALVNAMYLGGVF
                     ASLHHGLPVGITALITGLQPILTAMFARHLLGETVNRRQWLGIGVGFIGVALVVAHKV
                     GGPDSNLTGLWLAVVALIGITAGTLYQKKFCGEMDLRSGSVIQFSSSLIFISILVVCF
                     ESMAIQWTGEFIFALFWLVIILSIGAISLLMVLIRRGAAAKVASLFYLVPPVTALMSF
                     FIFDEALGLTELVGMAAVVIGVALVTRE"
     gene            1268..1573
                     /locus_tag="QF359_01155"
     CDS             1268..1573
                     /locus_tag="QF359_01155"
                     /inference="COORDINATES: protein motif:HMM:NF016627.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HJO85547.1"
                     /translation="MKPSPCAFFGYHRALCVYSYLYRGTRENPGLVAGFLPGGFYRGV
                     AFRVAAQEWPQVRRLLDDREMVYDVYIPKWMQAEIKGQRQQVFVTSLIRTTSNLLET"
BASE COUNT          410 a          419 c          445 g          522 t
ORIGIN      
        1 ccatgatgca aggctttggc aagttcgacc aggctaggcc cttctaaggg gcaaataggg
       61 cccttctaag atattgagtg taggtggttg gtattcgagg gcggcatgac gctgagctga
      121 tgagccgcgt ggaactgcac gccgtgtgcg caaattcttc tgactattgg ccatcaacaa
      181 ctcccaacat tagcaatcta tcggcattcg attatttcta taaatggttg gacacatcgg
      241 cgcgaggccg taatctagac caaattcaat aagtgatcaa agcatgactg attcgcctac
      301 catttctaaa cctcaatccg gcagtcaaga atcaccaaaa aattattgga ttgccgccat
      361 gccggcgaca ttcgtatttc tctggagtac gggttttatt ggcgccaaat acggcatgcc
      421 atataccgag cctttcacct ttctaagtgt ccggttctta cttgtcatcg ggttgatgct
      481 cctattgagt ttcattacta aagctccttg gccaacaagc atcaagatgg ccattcatat
      541 tgcgattgcc ggcgcgctgg taaatgcgat gtatctggga ggtgtttttg cctccctcca
      601 tcacggttta ccggtcggca ttaccgccct aatcactgga ttacagccca ttttaacagc
      661 tatgtttgcc cgtcatcttt taggcgaaac cgtcaatcga cggcaatggc ttggtattgg
      721 cgttggattt atcggtgtgg cactcgtggt tgctcacaag gttggtgggc ctgacagcaa
      781 tctcaccggc ctttggctcg ccgtggtggc gcttatcggc ataaccgccg gcacgctcta
      841 tcaaaagaaa ttttgcggtg aaatggattt gcgcagcggc tcggttattc agttttcttc
      901 ttcactaatt tttatttcga tattggtggt ctgttttgaa tcaatggcaa ttcaatggac
      961 tggtgagttt atatttgccc tgttttggct ggttattatt ttgtcaatcg gtgccatttc
     1021 attgttaatg gtgctgatcc ggcgcggtgc cgccgccaaa gtcgcgagcc tgttctatct
     1081 cgtgccaccc gtaactgcac taatgtcatt ttttattttt gatgaagcat taggcctgac
     1141 cgagcttgtc ggcatggctg ctgtcgttat tggcgttgcg ctggttacca gagaatgaac
     1201 acgccggatc atgatgtttg ggcttttggt tatgcgtcct tgatatggcg gcccgatttt
     1261 aatcatcttg aagcccagcc cgtgcgcctt ttttggctat caccgggcac tctgtgtcta
     1321 ctcctatctt taccgcggca cccgggaaaa tccgggattg gtagctggat ttttaccggg
     1381 tggtttctac cgaggggtgg cgtttcgcgt cgcggcgcag gaatggccgc aggttcgccg
     1441 gcttttggat gatcgggaga tggtctatga cgtctatatt ccaaaatgga tgcaggctga
     1501 aattaagggc cagcgacaac aggtttttgt tacatcgcta atccggacaa cgagcaattt
     1561 gctggaaact taacggatga agttaccgca agattaatag ccatcgggag cgacaccagc
     1621 ggcaacggta tcgaatactt ctacaacaca ttaaaatatt tgcacaaact aggtatccgc
     1681 gatcagaatt tagagaaaat taataaacta gtcagcgatt ttggccagca agataattaa
     1741 ctgagctctt tcatcagcag ataaattctt agctatccga tcctcatgag ccgcta
//
LOCUS       DASCNL010000091         1292 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000233220, whole genome shotgun sequence.
ACCESSION   DASCNL010000091 DASCNL010000000
VERSION     DASCNL010000091.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000233220"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1292)
                     /locus_tag="QF359_01160"
     CDS             complement(<1..>1292)
                     /locus_tag="QF359_01160"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85548.1"
                     /translation="YADYFACAAGLAAALIEMGVKGERVVVLKSNSIVTSVAAHAVWA
                     ASGQLVLFNPLFTENELGPLIADAAPKAVICDLAHKEMLAPLVEANNISHFYTFDDSA
                     VSIDQWCGNRTLKLPEPMPNSGDVAMLAFTGGTTGLPKGAIHTQEKLVFGARLVEALW
                     STKIAGDIWLNVAPQSHIWGWFMTLLAPLYGCNTVVIVPQFRPDVVINELARTKATIF
                     AGGPSVIYNALLSVPALKEADLSNLRLCLGGGSPFADAAVETWQTVTGFTIHEAWGMS
                     EGAPISGNSSSIPNKVGSVGFPCAMTDVEIVDPENGVDILPAGENGEFRVKGPQMVTE
                     YWNRPEETANLIQGGWTYTGDIGHIDKDGRLTIVDRKKDMVIVGGYNVFPREIDEVLF
                     AHPDIQEAAAVGVADKYSGEAIQAFVVLADGVNPTSEE"
BASE COUNT          342 a          346 c          296 g          308 t
ORIGIN      
        1 ctcctcagat gtggggttta ccccatcagc gaggacaaca aaagcctgaa ttgcctcacc
       61 gctatatttg tctgctacac caacagcggc ggcttcctga atgtcgggat gagcaaacag
      121 cacttcatca atttcacgcg gaaacacatt gtagccaccg acaatgacca tgtctttttt
      181 acggtcaacg atggtcaggc ggccatcttt atcgatatgg ccaatgtcac cggtgtaggt
      241 ccagccaccc tgaatgagat ttgccgtttc ttctggccgg ttccagtatt ctgtaaccat
      301 ctgaggccct ttaacgcgaa attcgccatt ttcacctgcc ggtaagatat ctacaccatt
      361 ttccggatcg acgatttcaa cgtcggtcat tgcacaagga aaaccaacgc tgccaacttt
      421 atttggaata cttgaagaat tgccggatat tggcgcgccc tctgacatcc cccaggcttc
      481 gtgaatagta aacccggtaa ctgtctgcca tgtttccaca gccgcgtcgg caaaaggaga
      541 tccaccgcca agacaaaggc gtaaattact caaatccgcc tccttcagtg ctggcacact
      601 cagtaaagca ttataaatga cagaggggcc acctgcaaat atggttgcct ttgtacgagc
      661 cagttcattg ataaccacgt ctggtctaaa ttgcggtaca ataaccactg tattgcagcc
      721 ataaagtggt gctaacaatg tcatgaacca gccccaaata tgtgattgtg gtgctacgtt
      781 caaccaaata tcaccggcta ttttagtgct ccaaagtgcc tcgaccagac gtgctccaaa
      841 gactagtttt tcctgtgtat gaatagcccc cttgggcaga ccggtggtgc caccggtaaa
      901 tgccaacatc gcaacgtcgc cggaattggg cattggctcc ggcagtttaa gagtccgatt
      961 gccgcaccac tggtcaattg aaacagcgct atcatcaaag gtataaaaat gagaaatatt
     1021 attggcctcg accaagggtg ctaacatctc cttgtgggcc aaatcacaaa tgactgcctt
     1081 gggtgccgca tcggcaatca acggaccaag ttcgttttcg gtgaatagcg gattgaataa
     1141 gaccagttga ccactagccg cccagacggc atgggcagca acggaagtta caatagagtt
     1201 gcttttaagc acaaccactc gttcaccttt gacgcccatc tcgatgagcg ccgctgccaa
     1261 accggcggcg caggcaaagt aatcggcgta gg
//
LOCUS       DASCNL010000092         1753 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000234475, whole genome shotgun sequence.
ACCESSION   DASCNL010000092 DASCNL010000000
VERSION     DASCNL010000092.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000234475"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1215
                     /gene="hemN"
                     /locus_tag="QF359_01165"
     CDS             <1..1215
                     /gene="hemN"
                     /locus_tag="QF359_01165"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HJO85549.1"
                     /translation="YFHIPFCDSMCWFCGCYTKIVNRYDPIAAYLETLLQEVDLVAEK
                     LPSRFKAQHLHWGGGSPTMLTPSDWQCLIDRLRQRFDIAEAAEIAVELDPRDATEDYI
                     KGIAEAGVNRASIGVQDFHPEVQEAINRIQPFEVTKQVIDWLRQYGINSINMDLMYGL
                     PHQNVARVADQVDKAVSLEPQRIALFGYAHVPWMKEHQKMISEADLPDADARWEQAEA
                     ASDRLVELGYVRIGFDHFARPDDSLAIALKSGTLQRNFQGYTADKAATLIGFGASAIS
                     SLPQGYLQNHLPMKTHKTAIEQLQIPTARGIAIDQDDLLRRKIIEHLMCDMSVNLTDV
                     CAEFDTKPENLKAEIDRLAPYIEDGICVYDNFKISVNEEARPFVRLIAAAFDRYLNDA
                     GDSETKRHSRAV"
     gene            complement(1201..>1753)
                     /locus_tag="QF359_01170"
     CDS             complement(1201..>1753)
                     /locus_tag="QF359_01170"
                     /inference="COORDINATES: protein motif:HMM:NF018017.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ELM1/GtrOC1 family putative glycosyltransferase"
                     /protein_id="HJO85550.1"
                     /translation="FSDFKKPLIGLVLGGATGRRPFSAEIAQELGRQSGDLVKKLDGS
                     LFVTSSPRTGSALDAVLSGLAGADVEPAFVYRWSPEDPANKNPYLGIIALADQLIVTG
                     DSTSMCSEVCASGKPVHIFAPEGFLGNKHRRLVEELCEKKYAQLLDLEAEVSAVSSPI
                     KLDAASQIADEIRTRLLPNLDGA"
BASE COUNT          448 a          448 c          427 g          430 t
ORIGIN      
        1 tattttcata ttccgttctg tgattctatg tgctggttct gcggctgtta taccaaaatc
       61 gttaatcgtt atgatcccat cgccgcttat ctggaaactt tgctgcaaga agtagatttg
      121 gttgctgaaa aactacccag ccgtttcaaa gcccaacacc tgcattgggg cggtggcagc
      181 ccgaccatgc taacgccatc tgattggcag tgcctcattg atcgcttgcg ccaacgtttt
      241 gacattgctg aagctgctga aattgcagtt gagcttgatc cacgcgatgc taccgaagac
      301 tatatcaaag gtattgccga agctggcgtc aatcgggcga gcatcggggt ccaagatttt
      361 catcctgaag ttcaagaagc aattaatcgt atccaacctt tcgaagtcac caaacaggtg
      421 attgattggt tgcgccaata cggcatcaat tcgatcaaca tggatttgat gtacggctta
      481 cctcatcaaa acgtcgcccg ggtcgctgat caggtcgata aagctgtctc acttgagccg
      541 caacggattg cactctttgg ttatgcccat gtgccgtgga tgaaagaaca ccaaaaaatg
      601 atctcagaag ctgatttgcc ggacgccgat gcaaggtggg aacaggcaga agcagcttca
      661 gaccgtctgg tcgaactcgg ttatgtacgg atcggtttcg atcacttcgc tcgccctgat
      721 gacagtttgg cgatcgcatt aaaaagcggc acattgcaac gaaattttca aggctatacg
      781 gctgataaag cggcgacact tattggcttc ggtgcgtccg cgattagctc gttgccacag
      841 ggttatttac aaaatcatct gccgatgaaa acccacaaaa cggctattga gcagttgcaa
      901 ataccgaccg cccggggcat cgcgatcgac caggacgatt tgctgcgccg caaaatcatc
      961 gagcatttga tgtgtgatat gagtgttaat ttgaccgatg tctgcgctga atttgacacc
     1021 aaaccagaaa atttgaaagc tgagatcgac cgcttggcgc cctatattga agacggtatt
     1081 tgtgtttacg ataattttaa aatttcggtt aacgaagaag cacggccctt tgtccggttg
     1141 atcgccgctg ccttcgaccg ctatttaaac gatgccggcg atagcgaaac caaacgccac
     1201 tcacgcgccg tctaaattcg gtaataagcg cgttctaatt tcatcagcaa tttgactggc
     1261 tgcatccaat tttatcggtg aggacacagc cgaaacctca gcctccaggt ccaacaattg
     1321 ggcatatttt ttttcacaca gctcttcgac cagacggcga tgcttattgc ctaagaaccc
     1381 ctccggcgca aaaatatgaa ccggcttgcc cgacgcgcag acttccgaac acattgaagt
     1441 ggagtcgcca gtaacaatta gctggtcggc taaggcgata attcccaggt aagggttttt
     1501 gttagctggg tcctccggtg accagcgata aacaaaagcc ggctcaacat cggcaccggc
     1561 cagcccggac agtacggcat ccaaggcgct gccggtacgc ggacttgaag tcacgaacag
     1621 gctgccatca agttttttca caagatctcc ggattgccgg ccaagctcct gggctatttc
     1681 agcagaaaac ggccgccgcc cggttgcccc gccgagcact agcccgatca gaggtttttt
     1741 aaaatcggag aat
//
LOCUS       DASCNL010000093         1026 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000238190, whole genome shotgun sequence.
ACCESSION   DASCNL010000093 DASCNL010000000
VERSION     DASCNL010000093.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000238190"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="QF359_01175"
     CDS             complement(<1..279)
                     /locus_tag="QF359_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85551.1"
                     /translation="MSSTPAPAPISNPTPKAHFGSRLPFFYGWIVVGVAFITMAFSVK
                     ARTSFSLLFPPILDEFGWARGTIAATFSIGFVVSTVLTPFIGALMDRFG"
     gene            409..795
                     /locus_tag="QF359_01180"
     CDS             409..795
                     /locus_tag="QF359_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85552.1"
                     /translation="MKKLFFSLLALMFLAPVSANADTADLDRQLRDHTFVYIDKKTGL
                     EHTIYFGRFGKVYDEYFPCKFVDGTWRITDAGTLCLEDTADKSRRDGKTCLKPKISGI
                     KISFFDSAGNLAYQSKLTKGNGMPLG"
BASE COUNT          283 a          253 c          252 g          238 t
ORIGIN      
        1 accaaaacga tccattaaag cgccgatgaa cggcgtcaac acggttgaga cgacaaagcc
       61 gatcgagaag gtggcggcga tagtaccacg cgcccagccg aactcatcga ggatcggcgg
      121 gaatagcaac gagaaagacg tccgtgcctt gacggagaag gccatggtaa taaaggcgac
      181 accaacgact atccaaccat agaagaacgg caaacgacta ccaaaatgag ctttgggagt
      241 tggattggat ataggcgcag gtgcaggagt actactcatg ccgccaaact agttattttt
      301 atcggtcccg ccaaacacaa tcgaaatatg cagtttcaaa gctttaatgg catttcaaga
      361 atcatcaata ttttttttac agcttttttt tggtactctt ttgccataat gaaaaagcta
      421 tttttctcgc tgctggctct tatgttttta gcaccggttt ccgcgaacgc cgatacggct
      481 gatctcgacc gccagctgcg cgatcatacc tttgtctata ttgataagaa aaccggtctt
      541 gagcacacca tctattttgg ccgctttggc aaagtctatg atgagtactt cccgtgcaaa
      601 ttcgtcgatg gcacgtggcg gatcaccgat gccgggacgc tctgtctgga agacaccgcc
      661 gacaaaagcc gccgcgatgg caagacgtgc ctgaagccaa agattagcgg cattaaaatc
      721 tcatttttcg atagcgccgg aaaccttgcc tatcagtcta agctgaccaa aggcaacggt
      781 atgccgctcg gctgaaaagt ctattgatcc tcgcgcgtgc cgcgagttta ataattacgc
      841 cctttaatcg gtgctgtcag atgaatgcgg gctcatctga cagcaccaat tgttgaggat
      901 tcacaacccg aaaggcgcgc ctgttgggag gcctgaaatt gaggagaaat cgccatgccc
      961 cagataagga ctgaacgaat tctagataat cccacaatct gcattgatca tgccggcgaa
     1021 ggtgag
//
LOCUS       DASCNL010000094         1329 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000240157, whole genome shotgun sequence.
ACCESSION   DASCNL010000094 DASCNL010000000
VERSION     DASCNL010000094.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1329)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000240157"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="QF359_01185"
     CDS             complement(<1..489)
                     /locus_tag="QF359_01185"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO85553.1"
                     /translation="MALELDLRGKKAVITGASEGIGRAIAHQFAEEGIDLALSARSQD
                     GLQEVKSACEQAYGVNVDIYPMDLSKNTDQSELSRQTADADILVNNAGAIPKGKIHEI
                     DEAQWRDVWDLKVFGYINLCRDFYGFMKERGDGVIINIIGNGGEKPVSDYIAGSTGNA
                     ALM"
     gene            complement(511..1206)
                     /locus_tag="QF359_01190"
     CDS             complement(511..1206)
                     /locus_tag="QF359_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HJO85554.1"
                     /translation="MINVYSWPTPNGRKIHIMLEETGLDYKAHAINIGKGDQFEADFL
                     KLSPNNRIPAILDSDGPDGKPISLFESGAILIYLAEKTGQFLPGEPRAKYATLEWLMF
                     QMGGVGPMFGESNHFSHYAVDKIPYAIDRYTSECKRLYRVMDKRLSDVEYLAGDDYTI
                     ADIATHPWAQGYERRDVDIKEYPNVKRWIEIIHGRPAVIRGNEVLANERSSGNFSAKE
                     REVLFGKTQFKKR"
BASE COUNT          345 a          334 c          279 g          371 t
ORIGIN      
        1 catgagggct gcattgccgg tactgccggc gatataatcc gataccggct tttcaccgcc
       61 gttaccgata atattgataa taacgccatc accccgctct ttcataaaac cataaaagtc
      121 gcggcataaa ttgatgtagc caaaaacttt taaatcccaa acgtcacgcc attgtgcttc
      181 atcaatctca tgaatttttc cttttggaat tgcaccggca ttattgacca aaatatcagc
      241 gtctgcggtt tgtcgggaaa gctcggattg gtcagtgttc ttgctgaggt ccatggggta
      301 gatatcaaca ttgacgccat atgcctgttc acatgctgat ttaacttctt ggagcccatc
      361 ctgacttctc gccgacaagg cgagatcgat gccctcttcg gcgaactggt gggcaatggc
      421 gcgaccgatt ccctccgacg ccccagtaat caccgctttt ttgccacgta aatctagttc
      481 caaagccatc cgggtcgctc caaactgcta ttagcgtttc ttgaactgag ttttaccaaa
      541 caaaacttcc cgttctttgg cggaaaagtt gccggatgat cgttcgttgg ccaggacttc
      601 attaccccgg atgacagccg ggcgtccatg aatgatttca atccaacgtt ttacattggg
      661 atattccttg atgtcgacat cacggcgttc atagccctga gcccaaggat gggtcgcgat
      721 atcggcaatc gtgtagtcat caccggcgag atattcaaca tcactcaatc gcttatccat
      781 caccctataa agccgcttac attcgctggt gtagcgatct atcgcatagg ggattttatc
      841 aaccgcataa tgggagaaat gattggattc gccaaacatc gggccaacac cgcccatctg
      901 aaacattagc cattccagcg tggcatattt ggcacgtggc tccccgggta aaaactgacc
      961 ggttttttcc gcgagataga tcagaatagc accagattca aataatgaga tcggcttgcc
     1021 atccggtcca tcactatcaa gaatggccgg tatacggtta tttggtgaaa gcttcaaaaa
     1081 atcagcctca aactgatcgc ctttaccgat attgatggca tgcgctttat agtcgaggcc
     1141 ggtttcttcc aacataatat gaatttttcg gccgttcggc gttggccatg aataaacatt
     1201 aatcattcca agtattttcc cttattatta gataattatc actaaccgtc ggcaaatttt
     1261 tcttgttcct acaattataa atactatcga tacaaataac tgctgtgacg ccttttcagg
     1321 gaaagagtg
//
LOCUS       DASCNL010000095         2029 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000240566, whole genome shotgun sequence.
ACCESSION   DASCNL010000095 DASCNL010000000
VERSION     DASCNL010000095.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000240566"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1793)
                     /locus_tag="QF359_01195"
     CDS             complement(<1..1793)
                     /locus_tag="QF359_01195"
                     /inference="COORDINATES: protein motif:HMM:NF015155.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HJO85555.1"
                     /translation="MSSKAKSTFRRAISQWVGWVCRNAFATILLSFIATIALFYITVT
                     EIGINTDTSDMLSPDLSFRQNSIALSETFPQFSDNIVVVIDGGNADLVNQAADLVGAQ
                     LRLEPKLFGEVFDPAGLAFFRRNSLLYLETNELAELSDRLIAAQPFLGTLWNRPTLSG
                     LFDLLSLFLKDGKSNSELLGEARPMISSITDIISAQTADKPDLLSWRNIISGNKTKRP
                     TRIIVIQPKPDFSSFQPGVEAIKRLREIGRELKLTHKFGARLRLTGSVPLAEEELESV
                     VDGLGLAGLLSLTLVLVLLFWGLKSLRLVLATLVTLIFGLVWTAGFATLAVGTLNLIS
                     VAFAVLFIGLSVDFGIHFALRYREISDNPLDALTSTAERVGGTLSLSAVAAGIGFFSF
                     LPTDYIGLAELGLIAGGGMFIALFANLTLLPTLIFLMPPGPSPTTTPVKIPSNTKTHR
                     PIIGVATLLAVLSLFIAPKVIFDFDPLNLKDTRTESVATFFDLMANGNGNLYSITVLA
                     KDLSTAEQLAERAKKLPEVDSIVTLSSLVPTEQDDKLAIVENLTLILGPALTGPSKAT
                     QSTENERLRATINLQKEIRAFAKISAKSELS"
BASE COUNT          566 a          472 c          492 g          499 t
ORIGIN      
        1 cttgataatt cagatttggc tgatatcttt gcgaaagcgc gaatttcttt ttggaggttt
       61 atagttgccc tcagcctttc attttctgtt gattgagttg ccttggatgg cccagtgagt
      121 gcgggcccta aaataagagt cagattttcg acaatagcga gcttgtcgtc ttgctcggta
      181 ggcactagac tggataaggt gacgatacta tccacttctg gcagcttttt tgcccgctcg
      241 gccaattgtt cagccgtgct caagtctttg gcgaggaccg taatgctgta gagattgcca
      301 tttccatttg ccatgagatc aaagaatgtt gcaacggatt ccgtgcgggt atcttttaaa
      361 tttaaggggt caaaatcaaa tattactttt ggcgcaataa aaagagacaa gacagcgagg
      421 agggtagcca caccaataat tggccggtga gttttggtgt tagatggaat tttaaccggt
      481 gttgtcgttg ggctaggtcc tggcggcatc aagaatatca aggtcggcaa aagcgtaaga
      541 tttgcaaaaa gagctatgaa cataccgccg ccagcaatta gcccgagctc agctaaaccg
      601 atataatcgg ttggcaggaa agagaaaaaa ccaatccctg cggctaccgc cgataagctt
      661 aatgttccgc caacccgctc cgcagtactc gtaagagcgt ctaaaggatt atcagaaatc
      721 tcgcggtatc gtagcgcaaa gtgaatacca aaatcgacgc tcagcccaat aaacaatacg
      781 gcaaaggcaa ctgaaataag attgagtgtg ccgaccgcca gcgtggcaaa tcccgctgtc
      841 cataccaggc cgaaaattaa agtgaccagc gttgccaaga ccagccgtag cgattttaag
      901 ccccaaaaaa gtaaaacgag gacgagtgtt aaagacagaa ggcccgccaa tcctaagcca
      961 tcaaccacac tttcaagctc ttcttcggcc aaaggaactg agccagtaag gcgcagccgc
     1021 gcaccgaact tatgcgttaa ttttaattcc cggcctatct cgcgcaggcg tttgatcgcc
     1081 tcaactcctg gttggaagga gctaaaatcc ggtttgggtt ggataacgat tatccgcgtc
     1141 ggacgtttag ttttgttgcc agaaataata ttacgccaag acaatagatc aggtttgtca
     1201 gctgtttgtg ctgagataat atcggtgatg ctgctgatca tcggtcgcgc ctcaccaagc
     1261 agttcggagt tactcttacc atcttttaaa aaaaggctca gtagatcgaa caggccggaa
     1321 agtgtcggcc tgttccaaag tgtgcctaaa aatggctgcg ctgcaatgag ccggtccgat
     1381 agttcggcca actcatttgt ttcaagatag agcaggctgt tgcgtcgaaa aaaagccagg
     1441 ccagctggat caaacacctc accgaatagt ttgggttcca agcgcaattg agcaccaact
     1501 agatcagcgg cttggtttac caaatccgca tttccgccat cgatcacgac aacaatattg
     1561 tcggagaatt gagggaaagt ctcactgagg gcgatcgagt tctgccgaaa agacaaatcg
     1621 ggcgataaca tgtcggaggt atcagtgtta ataccaatct cggtgactgt aatataaaaa
     1681 agcgcgattg ttgcgataaa cgacagcaag atcgtcgcaa aagcgttacg gcacacccag
     1741 cctacccatt gactaatggc acggcggaat gttgatttgg ccttcgagct caatattgtc
     1801 tgcctgttat tggtatgcct taagtctatc tcaaacttga cacaacgaaa ctactttaac
     1861 actttggcct atgacaaaag atcaaaagac caaaataccc tacgatcagc gtctcgcgcg
     1921 attaatggtg cggcctctgg tgaatacgcc gattcgaccc aattacatca ccggacttac
     1981 gcttattatg gcccttgggg ccggtatgct atttgcgatt ggcggcgag
//
LOCUS       DASCNL010000096         1199 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000245518, whole genome shotgun sequence.
ACCESSION   DASCNL010000096 DASCNL010000000
VERSION     DASCNL010000096.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000245518"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="QF359_01200"
     CDS             complement(<1..292)
                     /locus_tag="QF359_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85556.1"
                     /translation="MSLVTLTILISLTGCGFEPIYNAGTSSVFESDMREIEISPIENR
                     IGQQLRNELEQRILPKGRARFSKYILNVTLSKSKQGLAVKKSEIATRANLHFR"
     gene            complement(300..>1199)
                     /locus_tag="QF359_01205"
     CDS             complement(300..>1199)
                     /locus_tag="QF359_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HJO85557.1"
                     /translation="YLNVKEPFAGLMTQGMICHETYQDSDDNWLLPDEVTKSANGELV
                     SVAGSKPVKLGRSEKMSKSKKNVVDPEIIISEYGADTARLFMLSDSPPDRDLDWTEAG
                     IEGAWRYINRLWRMVSEPNVPIGELGAPIPDAMSEDIEKVRRSIHQTVHAVSADLDKF
                     HFNKAVARIRELTNALDGMNPENSGASWVYRDGIETVIKLVGPIMPHIAEEMWQSLGH
                     KNYVIETAWPGYDETLLVDDTITIGVQVNGKMRGTMELPKDCDQATAEAMALELETVV
                     KAINGKVVRKVIYVPNRILNVIV"
BASE COUNT          308 a          307 c          247 g          337 t
ORIGIN      
        1 cccggaagtg taaattcgcc cgcgtagcaa tctctgattt cttaaccgct agcccctgct
       61 tgcttttaga caaagtaaca ttaagaatat atttgctaaa tcgggcgcga ccctttggca
      121 aaatacgttg ttcaagttca ttgcgcagct gctggccaat acgattttca atcgggctaa
      181 tctcaatttc tcgcatatcg gattcaaata ccgaactggt tccagcgtta taaattggct
      241 cgaaaccaca gccggtcagg ctgatcaata tagtcagggt gacgagactc ataatttttc
      301 tagacaataa cattcaatat ccgatttggc acataaatta ctttccgcac gactttgccg
      361 ttgatggctt ttacaaccgt ctcaagttct aacgccatag cctcagcggt cgcttggtcg
      421 caatctttcg gcagttccat cgtgcctcgc atttttccgt ttacttgcac accgatagta
      481 atggtatcat caaccagtaa ggtctcatca taaccaggcc aagctgtttc aataacataa
      541 tttttgtgac caagcgactg ccacatttct tcagcaatgt ggggcatgat ggggccaacc
      601 aatttaatca ctgtctctat accatcgcga tagacccagg acgcgccaga attttcagga
      661 ttcatgccat cgagagcatt agtcagttcg cggatgcggg caacagcttt gttaaaatga
      721 aacttatcca aatctgcact aacagcgtgc acagtctggt ggatagaacg tctaaccttt
      781 tcgatgtctt ctgacatggc gtctggtatc ggcgctccaa gttcgccaat cggcacattg
      841 ggttctgaaa ccatccgcca aagccggttg atataacgcc acgccccttc aattccagct
      901 tcggtccaat caagatcccg gtcgggcgga ctatctgata gcataaataa tctagccgta
      961 tcggcaccgt attcggaaat tataatttca ggatcaacaa cattcttttt agatttgctc
     1021 attttttcag agcggcccag tttgaccggc ttactgccag cgacacttac gagctctccg
     1081 ttagcggact ttgtaacctc atccggcagc aaccagttgt cgtcagaatc ttgataggtt
     1141 tcgtgacaga tcataccttg ggtcatcaac ccggcgaacg gttctttgac attcagata
//
LOCUS       DASCNL010000097         1655 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000246340, whole genome shotgun sequence.
ACCESSION   DASCNL010000097 DASCNL010000000
VERSION     DASCNL010000097.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000246340"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(66..>1655)
                     /gene="pnp"
                     /locus_tag="QF359_01210"
     CDS             complement(66..>1655)
                     /gene="pnp"
                     /locus_tag="QF359_01210"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HJO85558.1"
                     /translation="KLNLLVAGTQEGVLMVESEASELSEEVMLGAVMLGQEANQQVIQ
                     AIIELAKACAKEPREVPETQAKVAAVNDKVKELSEAGLREAYAISEKAARQDKVAGVK
                     ANVTKAFEDDEEATDMMVGGALKSVEKDIVRKDIIKTGQRIDGRDTKTVRPIVSEVGL
                     LPRAHGSALFTRGETQAMVVATLGTGQDEQIIDGLDGDYREHFLLHYNFPPYSVGEAG
                     RMMGPGRREIGHGKLAWRAIHPIMPKKDDFPYTIRIVSEITESNGSSSMATVCGTSLS
                     MMDAGVPLARPVAGIAMGLIKEDDGVAVLSDILGDEDHLGDMDFKVAGTSEGITALQM
                     DIKITSITKDIMETALEQAREGRLHILDEMAKAIDHARDDVSDNAPRITVIMVPTDKI
                     REIIGPGGKMIREICETTGAKIDIEDDGTVKVAAVDEQASEGAIGMIKAITAEPEVGV
                     IYTGKVVKTVDFGAFVNFMGARDGLVHISELRPERVEKTTDIVNVGDEVKVKLIGIDD
                     RGKVKLSMKSVDQESGEEIAG"
BASE COUNT          388 a          467 c          363 g          437 t
ORIGIN      
        1 cattaggtga aaaaagtaat atttttatgc cgcctaatga gccttgcttt tcgaatagcc
       61 aggaattaac cggctatttc ttcaccgctt tcctgatcta ccgatttcat cgaaagttta
      121 actttaccac gatcatcgat accgatcagt ttaaccttaa cttcatcgcc aacattaaca
      181 atgtcggtgg ttttttcgac ccgctcagga cgtaattcac tgatgtgaac caggccatcc
      241 cgggcaccca tgaagttgac aaaagcaccg aaatcaaccg tcttgacgac tttaccggta
      301 taaatcacac caacttccgg ttcagccgta attgccttga tcataccgat ggcaccttcc
      361 gaagcctgct catccacggc cgcaacttta accgtgccat catcttcgat gtcgatttta
      421 gcacccgttg tttcgcagat ttcgcggatc atcttaccgc cggggccgat gatttcacgg
      481 attttatccg tcggcaccat aataaccgtg atccgcgggg cattgtcgct gacatcgtca
      541 cgggcgtgat caatggcttt ggccatctcg tccagaatgt gtaaacggcc ttcacgggcc
      601 tgttcaaggg ctgtttccat aatgtccttg gtgatcgacg tgatcttaat atccatctgg
      661 agagccgtga taccttcact ggtaccagca actttaaagt ccatatcgcc gagatgatct
      721 tcatctccga gaatatcgga aagcacggca acgccatcat cttccttaat caaacccatg
      781 gcaataccgg ctactggacg cgccaaaggc acgccggcat ccatcatcga aagggaagtg
      841 ccgcaaaccg tcgccattga ggatgagccg tttgattcag tgatctcaga gacaatccga
      901 atggtatacg gaaagtcatc ttttttcggc atgatcggat ggatcgcccg ccaagccagt
      961 ttaccatgac caatttcacg gcggccagga cccatcatgc gacccgcttc acctaccgaa
     1021 tagggaggga agttatagtg cagcaggaaa tgttcccggt aatcaccatc caaaccatca
     1081 atgatctgtt catcctggcc ggtacctaaa gtagcaacca ccatcgcctg ggtttcaccc
     1141 cgggtgaaca gtgcgctgcc atgagcccgc ggcaacaggc cgacttcaga gacaatcggg
     1201 cgtacggttt tagtatctcg gccatcaata cgttggccgg ttttaataat gtctttgcgg
     1261 acaatatctt tttcgaccga ttttagcgcg ccaccaacca tcatatcggt cgcctcttca
     1321 tcgtcttcga aggctttggt aacgtttgct tttactccgg cgactttgtc ctgccgcgcg
     1381 gctttttcgg aaatcgcata ggcttcccgt aaacccgctt cggacagttc tttgacttta
     1441 tcattaaccg cggcgacttt ggcctgggtt tccggcactt cgcggggctc tttggcgcaa
     1501 gccttcgcga gctcaataat tgcttgaata acctgctgat tagcttcttg accgagcatc
     1561 accgcgccga gcatgacttc ttccgacaat tctgatgcct ctgattcaac catcaacaca
     1621 ccttcttgcg ttcccgcaac gagtaggttc aattt
//
LOCUS       DASCNL010000098         1059 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000246546, whole genome shotgun sequence.
ACCESSION   DASCNL010000098 DASCNL010000000
VERSION     DASCNL010000098.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1059)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1059)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000246546"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            125..664
                     /locus_tag="QF359_01215"
     CDS             125..664
                     /locus_tag="QF359_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HJO85559.1"
                     /translation="MSRLPLLTYEDMNPAQQQLHDEILAGPRTRIAGPMHAWFLNPDY
                     GTLIQKVGAFCRYETSLLPRLSELAIIIVARHWSADVEWFAHSAIALDNGVSQTIVDA
                     IEQDQRPKFKNGDEALIYDLTKSILETKRVPDELYQQAKSELGDKTLLELTAIIGYYC
                     NIAVQLNVFEIPDQEGRTM"
     gene            complement(887..1054)
                     /locus_tag="QF359_01220"
     CDS             complement(887..1054)
                     /locus_tag="QF359_01220"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO85560.1"
                     /translation="MFENAEFKATVENNIALGHVGKVEDVAAAVLFLASPAAAMITGE
                     SLKVDGGWTAW"
BASE COUNT          312 a          250 c          236 g          261 t
ORIGIN      
        1 tttgatatta atatatgaga ttgtcatagt gcttctcccc gcattttaat taaattataa
       61 ataacactta gaactctaag gttaaccatc ttagcctgtc aaataagaag gaaggaaata
      121 tcaattgagc cgactccccc tactcaccta tgaagatatg aacccggcac aacaacagct
      181 ccacgatgaa attctggccg gcccgagaac gcgtattgcc gggccaatgc atgcttggtt
      241 tctcaacccg gactacggca cgcttattca gaaagtcggc gctttttgcc gttatgagac
      301 gtcactgcta ccacgattgt cggaactcgc aattattatc gttgcccggc actggagtgc
      361 agatgttgag tggtttgccc atagcgccat tgcccttgat aacggtgtat cgcaaacgat
      421 tgtggacgcg attgagcaag atcagcgccc gaaatttaaa aatggtgatg aggcattgat
      481 ctatgatctc actaaatcaa ttctggaaac caaacgcgtc ccggacgaac tctatcaaca
      541 ggcaaaaagt gaattgggcg acaagacgtt gctcgagcta accgcgatca ttggctacta
      601 ctgtaacatt gccgtgcaac tcaatgtctt tgaaataccc gaccaggaag gccgtaccat
      661 gtagaaagtt gattagatga ccaaatcaca atcaaatgaa ccaataaaat cattttctta
      721 cgaagacttt gaaagcgagc gaaggatgga actcggttcc catcttctcg ggcgtgacga
      781 gattatcgag tttgccaaag aatgggatcc gatctgaatt ctaaaccaaa acaggatttg
      841 ccggattgat ctgcgtcaaa atagaaaagt gtacctggta cactttttac caagcggtcc
      901 agccaccatc aaccttgaga ctctcgccgg taatcatggc ggcggcggga gaagctaaaa
      961 ataaaacagc ggcagcaaca tcttcgactt tgccgacatg gccgagggcg atgttgtttt
     1021 cgacggtcgc cttaaattca gcattttcaa acatcggcc
//
LOCUS       DASCNL010000099         5628 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000246813, whole genome shotgun sequence.
ACCESSION   DASCNL010000099 DASCNL010000000
VERSION     DASCNL010000099.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5628)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5628)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5628
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000246813"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(123..1313)
                     /locus_tag="QF359_01225"
     CDS             complement(123..1313)
                     /locus_tag="QF359_01225"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HJO85561.1"
                     /translation="MLKRLLTASLALVGMFGLLGPAHAADPVKIGFSIPKTGLFAPAG
                     PSQLNAYLVWQKMVNDKGGLDIGGKGRRKIEFVQYDDKSDPARAVKIYEKLITSDKVD
                     LVMAPWGTPHHFAIAPVVERHKFPLIGNTAASVALRKVKPGYLWFTTPMMPDNLAKEM
                     TAMLKSRSVKSVAIMYNLLPFASENIQFLMPALAKAGIKVLFEAKYPPDIKDMTGMLT
                     KVKSKNPDAVLVYSYPGDSILYMNQAREVGINAKTQYVMVGPAIGFFRGMFKGNLDGI
                     VTMAAWTPGMKNTTGSQEFYNAYKKMFKGHEPDYLDSVEVFVSSQILEQAIAKVGLDR
                     EKIRQAVNTMTFDTVYGKIKFDGVQNSITPAGFAQIQKGKIEVVWPKQRATSSVVDKG
                     AWAK"
     gene            complement(1353..3668)
                     /locus_tag="QF359_01230"
     CDS             complement(1353..3668)
                     /locus_tag="QF359_01230"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HJO85562.1"
                     /translation="MVAEKTTNEMYQVGKSIPKVDAREKVLGRAQYIADLTRPNMLFG
                     AMLQSPYAHARIIAYDTTAAEKVTGVKCVLTGDDFEDHKMGPFIKDEGAIAKGKVRYM
                     GEPVACVAAEDEETARAAALLINVEYDELPTVLSPEAALEAGAAVLHEDLADYFKVFE
                     AIAENNLMSYTEISEGDVDKAWDECDLIVENVYETQAQNHLSLEPCGALAEVEPDGLI
                     NLWSANQSVFRVQANVCECLGLPMSRVRSMTPKVGAGFGNKMEAHIQPLCVALALATK
                     RPVKMILSREEDFETVRARHPFKIRCKTGVKKDGTFVAREVELLLDGGAFADDSPGVL
                     GNATLMSVGPYHFPHAKAFGKVAYTNHLRFAAFRGFGNPQVTFAGEAQINDIADKLGI
                     DPIDLRLKNVLAKGQQWFGGQKVDSNGVYECLEKVRVSSDWDNKRKNSGENGIGISVA
                     GHISGLLATGAIVRMLEDGTFVLNTGATDIGQGSDTVLTQICAEALQIPIDRIRTATP
                     DTDASPYNWGTTASRVTYTTGRAVVGAAEDAVRQIKDYAAIVLESLADDLELREGGMV
                     GIKGANKEVSFFEIAAMTHWGVGGPIVGSHTLVFDQPTIDPKRAVAKGMPFTNIGVFT
                     FAAMVSEVAINQVTGKASAEGAWYAVDVGQAINPGLVEGQIDGGYAQGLGYALFEEMI
                     WDDGRLANPTLMDYKVPGTAEVPYDIDTTIVEHPEPDGPFGAKGVGEITLVTVPASIC
                     NAITHASGVRLRKMPFSPERVLNGIIENEIT"
     gene            complement(3672..4139)
                     /locus_tag="QF359_01235"
     CDS             complement(3672..4139)
                     /locus_tag="QF359_01235"
                     /inference="COORDINATES: protein motif:HMM:NF013923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO85563.1"
                     /translation="MSSGETISLNLNGEVREAKAGLTTTLLEVIRDQLGLTGAKKGCN
                     QGVCGACTVSIDGKLARACLSLAVNSVGREITTNEGLTEDGEPSALQQSFIDNGAVQC
                     GFCTSGMIVSSHALLQDIPNPSIDEVRDGLSGNVCRCSGYRKIIDAVRGMARG"
     gene            complement(4136..5002)
                     /locus_tag="QF359_01240"
     CDS             complement(4136..5002)
                     /locus_tag="QF359_01240"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HJO85564.1"
                     /translation="MTEAGYFDPVSVDEVVALLAADDEAKCVAGGASLVAMMNARLVE
                     PSRLVSLRHVEELKKIETAEDGWLQIGALVRHCDVAIADELADGNQILSQAASLIANP
                     VIRDMGTIGGSVGHFDPAADYPVALAALGAEIEIASEKGRRRIPVSNFFVDWYETALE
                     PGDLITCIRVPPPPTGSTGIYEKLAKVKGDLGIAMVAVIMAMQGDAVSHLAVSVGGCG
                     PKPIRLPEAEQALIGGSIDEAAIQDLVGKLSTASDPVDDVRASAAYRKLLIPRLVAQA
                     IGQAKVNLRDGS"
     gene            5260..>5628
                     /locus_tag="QF359_01245"
     CDS             5260..>5628
                     /locus_tag="QF359_01245"
                     /inference="COORDINATES: protein motif:HMM:NF017999.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HJO85565.1"
                     /translation="MKIEETFNVPETPETVWRFITDPVEVGPCVPGLSDIEVVGPDKY
                     KAKVKVTVGPIKAAFNFEVEVTKETPPSEVLSGTRGEEGSKASKVTAHNILRLSPSSD
                     GTEVYYSSEVSITGRLGKFGF"
BASE COUNT         1391 a         1533 c         1331 g         1373 t
ORIGIN      
        1 gctgccgcca acaattgagg tgatagcaga atatccaagg ttaagatgcc aactctattt
       61 caaatcataa aaagaaaggg tttcccgcgc gagcaggaaa cccaaactat ggatgacaat
      121 tactatttag cccaagcgcc cttatcgaca actgaagacg ttgcccgttg ctttggccat
      181 accacttcaa ttttaccttt ttgaatctgg gcgaaaccag ccggcgtaat gctattttgc
      241 acgccgtcaa atttaatttt tccgtagacc gtatcaaagg tcatggtatt aacggcttgg
      301 cggatttttt cacggtctaa gccaacttta gcgatggctt gttccaagat ttgagacgag
      361 acaaaaacct caaccgaatc caaataatcc ggttcgtgac ctttgaacat tttcttgtaa
      421 gcattgtaga actcttgcga acccgtcgtg tttttcatgc ccggagtcca ggcggccatg
      481 gtaacgatgc cgtcaagatt gcctttaaac atgcctcgga aaaaaccaat agctgggcca
      541 accatgacat attgagtttt ggcattgatg ccgacttccc gcgcctggtt catataaagg
      601 attgaatctc ccggatatga gtagaccaga accgcatccg gatttttgga tttaaccttg
      661 gtcagcatgc cagtcatgtc tttaatatct ggcggatatt tggcttcaaa taagactttg
      721 atgccggctt ttgccagagc aggcattaag aactgaatgt tttcagaggc aaatggcagt
      781 aaattgtaca tgatcgccac tgacttaacg ctccgcgact tcagcatggc ggtcatttcc
      841 ttggccagat tgtccggcat cattggcgtc gtaaaccaaa gataacccgg cttcacttta
      901 cgcaacgcaa ccgacgccgc ggtgttaccg atcagcggaa acttatggcg ctcaacaacc
      961 ggcgcaatag caaaatggtg tggggtgccc cagggcgcca taaccaaatc aactttgtca
     1021 ctggtgatca atttttcata aattttaacc gcccgggccg gatcggactt gtcatcatat
     1081 tgaacaaatt cgattttacg gcggcccttg ccgccaatat ccagaccccc tttatcgttg
     1141 accattttct gccacaccaa ataggcattt aattgagatg ggccagccgg tgcaaataag
     1201 ccagtttttg gaatcgaaaa tccgattttt accgggtcag ctgcatgggc aggccccaat
     1261 aatccaaaca tcccaacaag ggcaagggat gcagtaagta aacgttttaa cattttagtg
     1321 ctcctcctgt tagatctatt gttttaattt tattaagtaa tttcattttc tattatacca
     1381 tttaacaccc gttccggcga aaacggcatc ttgcgtagcc gcacgccact cgcatgagtg
     1441 atcgcattac aaattgaggc cggcaccgtc accaaggtaa tctcaccgac gcctttggcg
     1501 ccaaatgggc cgtccggttc cggatgctca acaattgtcg tatcaatatc gtaggggact
     1561 tccgctgtgc cggggacctt gtaatccatc aacgtcggat tggcgaggcg tccgtcatcc
     1621 cagatcattt cctcaaacaa tgcatagccg aggccttgtg cataaccgcc atcgatctgc
     1681 ccttcgacga gtcccggatt aatcgcctga ccaacatcaa cagcatacca agctccctct
     1741 gccgaagcct tgccagtgac ctggttgatc gcgacttcgg aaaccatcgc cgcaaaggtg
     1801 aaaacaccaa tattagtaaa gggcatgcct tttgcgacag cgcgtttagg atcaatggtc
     1861 ggttggtcaa acaccagcgt atgagacccg acaatcggtc cgccgacacc ccaatgggtc
     1921 atcgcggcaa tctcgaaaaa tgaaacttct ttattggcac ctttaatgcc gaccatgccg
     1981 ccctcacgca gttccaaatc atcggcgagg ctttccagca cgatcgccgc ataatccttg
     2041 atttgccgca cggcatcttc ggcggcaccg accacggcac ggccggtcgt ataagtcacc
     2101 ctgctcgccg tcgtgcccca attgtagggt gaggcatcag tatccggtgt ggcggtgcga
     2161 attcgatcga tggggatttg caaggcttcg gcacaaattt gcgtcaacac ggtatcggag
     2221 ccctggccga tatcggttgc gccggtatta agcacgaatg tgccgtcttc aagcatccga
     2281 actattgcgc cggtcgcgag caggccgctg atatgcccgg caaccgaaat accgattccg
     2341 ttctcaccgg aatttttgcg cttattgtcc cagtccgagc ttaccctgac tttttccaga
     2401 cattcatata ctccgttaga gtcaactttt tgaccaccga accactgttg gcctttggcc
     2461 agtacatttt tgaggcgcag atcaattggg tcgatgccaa gtttgtcggc aatgtcattg
     2521 atttgggctt caccggcaaa cgtcacttgg ggattgccaa aaccgcggaa agcggcgaac
     2581 cgtaaatggt tggtataagc aaccttaccg aaggctttgg cgtgcgggaa atggtacggc
     2641 cccaccgaca tcagagtagc gttgccgagc acgcctggac tatcatcagc aaaagctccg
     2701 ccatccaata atagctcaac ttcccgggca acaaaggtgc cgtccttttt gaccccggtt
     2761 ttgcagcgaa tcttgaacgg atgacgggcg cgaacagttt caaaatcctc ttcccgcgac
     2821 aggatcattt tgaccggccg cttggtcgcc agtgccagcg cgacgcagag cggctggata
     2881 tgcgcttcca ttttattgcc aaacccagcg ccgactttag gcgtcatcga gcgcacccgc
     2941 gacattggca gacctaagca ctcgcagaca ttagcctgca cccggaacac tgattgatta
     3001 gctgaccaca gattgatgag accatccggt tcaacctcgg ccaaggcgcc gcaaggctca
     3061 agcgacagat ggttttgcgc ctgggtctcg taaacgttct caacaatcag atcacattcg
     3121 tcccaggctt tatcgacatc gccttcggag atttccgtgt aagacatcaa attattttca
     3181 gcgatagctt cgaacacctt gaaataatct gcaaggtctt cgtgcaacac cgctgcaccc
     3241 gcctcaagcg ccgcttccgg cgacagcacg gtcggcagct catcatattc gacattgatc
     3301 aaaagtgctg cagcacgggc ggtttcttca tcctcggccg cgacacaggc gaccggctca
     3361 cccatataac ggactttgcc tttggcgatg gcaccctcgt ctttgatgaa tggtcccatt
     3421 ttatggtctt caaaatcatc accggtgagt acgcatttga cgccggtaac tttttcagcc
     3481 gccgtggtgt cgtaagcaat tatccgcgca tgggcatagg gactttgcag catcgcccca
     3541 aacagcatgt ttggccgagt gagatcagca atgtattgcg cccggcccag cactttttcc
     3601 cgagcatcaa ccttgggaat ggatttgcca acctgataca tttcattagt ggttttttcc
     3661 gctaccatag ctcagcctct cgccatgccg cggacggcgt cgatgatttt ccggtagccg
     3721 gaacaacggc atacattgcc cgacaagcca tcacggactt cgtcaatgct tgggtttgga
     3781 atgtcttgca acagagcatg ggaagatacg atcatgccgg aggtgcagaa gccgcattgg
     3841 acggcaccat tgtcgataaa ggattgttgc agggccgacg gttcaccatc ctcggttaaa
     3901 ccttcgttgg tggttatctc ccggcccaca ctattgaccg ccagtgacag acaggcgcgc
     3961 gctaacttac cgtcaatcga caccgtacag gcgccacaga ccccttggtt acagcctttc
     4021 ttggctcccg tcagccctaa ttgatcgcgg ataacttcaa gcaatgtggt ggttaggcca
     4081 gctttggcct cacgaacctc accgttgaga tttagggata tggtttcgcc cgaactcaag
     4141 atccgtctct caaatttact ttagcttggc cgattgcctg ggcaaccaga cgcgggatta
     4201 atagcttgcg gtaagccgcc gaagcacgga catcatccac cggatcgctt gccgttgaca
     4261 gtttgccgac gagatcctga attgcggctt catcaatact gccgccgatc aaagcttgtt
     4321 ccgcttcggg caagcggatc ggcttcgggc cgcagccacc gacactgacg gccaaatgac
     4381 tgaccgcatc accctgcatc gccattatca cagcgaccat ggcgatcccc aaatcacctt
     4441 ttaccttggc gagcttttca taaataccgg tgctgcctgt gggtggtggt ggcactcgga
     4501 tgcaggttat cagatcaccc ggttccagcg cggtctcgta ccaatcaaca aaaaaattac
     4561 ttaccgggat gcggcgacgg cctttttcac tagcaatctc gatttcagca ccaagtgctg
     4621 ccaaagcaac cggataatcc gcagcgggat caaaatgacc aaccgaaccg ccaatcgttc
     4681 ccatatcacg gataactgga ttggcgatca aactggcggc ctggcttaga atttgattgc
     4741 cgtcggcgag ctcgtcggcg atggcgacgt cacaatgacg gaccaaggcg ccgatttgca
     4801 gccagccatc ttcggctgtt tcaatttttt tcaattcttc aacatggcgc aaactgacca
     4861 gccgggacgg ctcaaccaga cgcgcattca tcatcgccac aagactggcc ccaccggcga
     4921 cacatttagc ctcgtcgtcc gcggccagca aagctaccac ctcatcaacg gaaacggggt
     4981 caaaataccc ggcttcggtc atctgtctgc ctccccactg catcgacagt caattgatta
     5041 gttcaatcgt gtccgccgaa cagcgatctg gatttttcgg ttttagttat tattatcggt
     5101 ttcatatatt gatcaaaacc gtattttttt ataaaagaac gccattcttt attgacagaa
     5161 ttttcttact ctgtcaacgt taaccacttc agatatatag ttaggcaaag ggcagaaagt
     5221 caaagcaaat aaaaaaatct gagtttcaca tgggttgaaa tgaaaatcga agaaactttt
     5281 aatgtgccgg aaacgcccga aactgtttgg cggtttatca cagatccggt agaggtcgga
     5341 ccctgtgtac cgggcctcag cgacattgaa gttgttggcc cagataaata caaagccaag
     5401 gttaaagtta ccgtcggccc gatcaaagca gcgtttaatt ttgaagtcga agtaaccaag
     5461 gaaacacccc cctctgaagt cttatcaggc acccgagggg aagaaggttc gaaggctagc
     5521 aaagttacgg cccacaatat attgagatta tcgccgtcaa gtgatggcac ggaagtctat
     5581 tacagttcag aggtttcgat caccggccgg ctcggaaaat ttggtttc
//
LOCUS       DASCNL010000100         1692 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000247440, whole genome shotgun sequence.
ACCESSION   DASCNL010000100 DASCNL010000000
VERSION     DASCNL010000100.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000247440"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            208..675
                     /locus_tag="QF359_01250"
     CDS             208..675
                     /locus_tag="QF359_01250"
                     /inference="COORDINATES: protein motif:HMM:NF013936.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HJO85566.1"
                     /translation="MKITDALRGEHAVLYVLLEDVRETISDSDNIDVVKKSISTLDRT
                     LLSHAEIENNFLFPALDPHIGQMGPLEMMRSEHQGIDELLEAARSEQDVAVLKSLAKQ
                     LVDLAYGHFQKEEMALFAMAEQFLSEDELSALGDQWAAKRNVEVQGQSCISAA"
     gene            complement(681..1175)
                     /locus_tag="QF359_01255"
     CDS             complement(681..1175)
                     /locus_tag="QF359_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003617249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HJO85567.1"
                     /translation="MSDFKLTSNSFNDGDTLAMDHILAEEYGFGCTGGNQSPHLAWTD
                     PPESTESFALTMYDPDAPTGSGFWHWVVINIPKDVRELALDASKNGLPAGAIETRNDF
                     PAPGYGGPCPPEGHGPHHYIFTLHAVNTAELPVTPDLSAAIIGFNLHFTTIDKAVLTG
                     IFEK"
     gene            complement(1484..>1692)
                     /locus_tag="QF359_01260"
     CDS             complement(1484..>1692)
                     /locus_tag="QF359_01260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85568.1"
                     /translation="SRLRRMVRTFHPAIRVIRASPKIEKDFSPLVYVPASFIFDRQGK
                     VVYGDGNREYLGTARLSKILDSIK"
BASE COUNT          474 a          380 c          412 g          426 t
ORIGIN      
        1 agtaggtaaa acggtcacca tgtgcgcctg ccttgaacaa catcacgact attcggcctc
       61 caaaaccaaa aaatcaaatt tggcaggcca tgaaatcgga gggataaaaa aggacagcta
      121 ataattaaaa ttgacctaag ttaaggaagc ccggtattgc ttcttctata ccttgggcta
      181 ctttagaatt agtcttaagg tataaaaatg aaaattacag atgctctccg cggcgaacac
      241 gcggttcttt atgtattgct cgaagatgtt cgggaaacaa ttagcgacag cgataatata
      301 gacgttgtca aaaaatctat ttcaacgctt gatcgcacgt tgctttcgca tgcagaaatc
      361 gaaaacaatt ttctctttcc tgcattggac ccgcatatcg gtcaaatggg accattggaa
      421 atgatgcgat cagagcatca aggtattgat gaactccttg aagctgctcg tagcgaacag
      481 gatgttgcag tgctaaaatc cttggccaaa cagttggtcg atcttgctta cggtcatttc
      541 cagaaagagg agatggcatt atttgcgatg gcggaacaat tcctcagtga agacgaattg
      601 tcagcgcttg gcgatcaatg ggcagcaaag cgcaacgtcg aggttcaggg gcaaagctgc
      661 atcagcgcag cctaaaggac ttatttctca aatattcccg ttagcacggc tttatcaatc
      721 gtcgtaaagt gcagattgaa gccgatgatg gccgccgaca aatcaggcgt taccggcagt
      781 tctgctgtat tgaccgcgtg taaggtaaaa atataatggt gtggaccgtg gccttcgggc
      841 ggacagggcc cgccgtagcc gggtgccgga aaatcattac gtgtttcaat cgcgcctgcc
      901 ggcaggccgt tcttcgatgc atcaagtgct aattcccgga catctttcgg tatattgatg
      961 acgacccaat gccagaagcc gctaccggtt ggagcatccg gatcatacat ggtgagggca
     1021 aagctttcgg tactttccgg tggatcagtc caggcgagat ggggcgactg gttgccgccg
     1081 gtgcagccaa agccatattc ttcagccaaa atatgatcca tggcgagcgt atcgccatcg
     1141 ttaaaactgt tgctggtgag tttgaaatct gacatcgctg cctccctttt ttccaaggtt
     1201 agaaaaggaa gcagatattt tcaagataaa taatactaag cgtttgagaa tatggaggaa
     1261 aacggcaact gcataaaata ttacacccat tcacatctta gtctttgtct gtttatccgc
     1321 ttgttacatc cggatgcgag actgcaggag ttcgaaaagg agattacagt gaaatttatt
     1381 cccctccctc cccaaactag cctttaaact cgcctgaata tttagagttc aaaaatgcaa
     1441 aagcccgcgc aacgatcagc gggttttttt tgggcacgaa aatctatttt atgctgtcga
     1501 gaattttgga cagtctcgcg gtgcctaaat attcccggtt gccatcgcca taaacaactt
     1561 taccctgccg gtcaaaaata aaactagccg ggacataaac caacggtgaa aagtctttct
     1621 cgatttttgg gctggcgcgg ataacccgaa tagcggggtg gaaggttcgc accatacggc
     1681 gcaggcggga gg
//
LOCUS       DASCNL010000101         4240 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000250989, whole genome shotgun sequence.
ACCESSION   DASCNL010000101 DASCNL010000000
VERSION     DASCNL010000101.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4240)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4240)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4240
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000250989"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1001
                     /locus_tag="QF359_01265"
     CDS             <1..1001
                     /locus_tag="QF359_01265"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO85569.1"
                     /translation="DKASYNDLALAIRGLVAYDNSPRLIYDMDCYDVDMCVLLPAFGM
                     SNEMNAELVERHPDKFVAVCSAMETAKKSRMGEEPWTIEAAAKEVDKLLATGKFVGIG
                     EGVPNDTMRRKTMSQTERLDQMRVIMDVARKHETVVQVHSGVVMGYPLTHHNWPETLH
                     PMWISDLAVEYRDVPIVINHGGIQGWWTERFYEEALLVAASNDNVYLETGLWWAELYR
                     KALIDPNIGAEKLMWACDWGASIPFHSQPGNYPSSYAVQIRSKKLVKHQVDVWGWSLK
                     QLLKLECTQDDLNLVLGGTAARIYKLTVPHSRLFRPVGKELNPQEEGRIDVAPTCC"
     gene            complement(1004..3592)
                     /locus_tag="QF359_01270"
     CDS             complement(1004..3592)
                     /locus_tag="QF359_01270"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85570.1"
                     /translation="MDISEPNTSEQDVWVPTSCSLCYGSCSIRAHRVDGVIVKIEGNP
                     DSAVGNGRLCGKGISGLMTHYNPGRVKMPLRRTNPEKGLDVDPGWQEISWQEALDEIC
                     THLKRVRDDDPRKLVFQRTTTVQSSMMPCFAFTSSFGSRNGGAGGGGLHCGNGAHLIS
                     GIMHASWSIVPDFEHCNYAMYFGASKGHGAGHVSTTNMQQAADARDRGMKMVVIDPMS
                     NFASAKATEWVPIRVGTDAALALAMANIMINELGAIDKPYLKAKTNAPYLIGPDKRYV
                     RDNVNNKPLIWDESSKSARTFDDADPEMMALGGEYNVGGVACQPAFALLGEHLKSYTP
                     ERAAEITTIPTDNIRRLATEFATEARIGSTIVIDGVTVPYRPAAAIAFRGSQGHKNST
                     YNMFAIDLLNQLVGSADVAGGCLGFNPVCHGYPETGRVAYTPTPAEDGLMITGSWMGP
                     HKPYPISEPAHPERLGLQDLFPMSMLSAILNSSDQDEWWEKFDLPYRPEVMLNFGTNV
                     LMSMGNKAAVADSLKKFKFIASFDINLHETTMFSDIVLPDCDYLQTYDSRSNFPFIFS
                     HPAGMGKWSWPVRQPVVGPEKEERLFADVLMEMAERVGFLPDMNTALNALLDIRPPYN
                     LERGQKYPYVEICDADLKDKFGPEKGLEWFKKNGVLSWPKKPEEVYWRPFVDVRVPIY
                     LEWMSDLWEKANAIAAPRGLDLPPEHYDPLPEWLPCLSHECTDTDFDLYAFYYRDTIH
                     TNSFTMENPWLDEAAQLDPFSYTIAINTEIGNKMGLKNGNPVKVESDTGLSVEGRIKL
                     TEGIHPEGLGIAALAGHWSDGLPVAKGKGVFFNDLLELDWAHSSPSNLNLDLCAKVKV
                     SRILVS"
     gene            complement(3818..>4240)
                     /locus_tag="QF359_01275"
     CDS             complement(3818..>4240)
                     /locus_tag="QF359_01275"
                     /inference="COORDINATES: protein motif:HMM:NF015431.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HJO85571.1"
                     /translation="QTILQGKFICLVRKDHPAVKMGKKFDTDAFLSFPHILVDSKGAR
                     KGLFDRKLAKLNLSRRIAVSVSNFAMVPQMLRRSDMIGVFTQRVCDVLREDYDLVVLP
                     VPVDTGILDGKMAWLVRHDNDLKHKWFRREIEHIAGNF"
BASE COUNT         1078 a         1121 c         1053 g          988 t
ORIGIN      
        1 ctgataaggc gagctacaac gatcttgcgc tcgccattag agggctcgtc gcctacgaca
       61 attcaccccg cctgatatat gacatggatt gctacgatgt tgacatgtgc gtcttgctgc
      121 cggcgtttgg catgtctaat gaaatgaatg ccgaattggt cgaacggcac ccagacaaat
      181 tcgtcgccgt ctgctcagcc atggaaacgg cgaagaaatc gcgcatggga gaagaacctt
      241 ggactatcga agccgccgcc aaggaagtcg acaagctgct tgcgaccggt aaatttgttg
      301 gcatcggtga aggtgtgccg aacgacacta tgcggcgaaa aaccatgagc cagaccgaac
      361 ggctagacca aatgcgcgtg attatggatg tcgcccgcaa acatgaaacc gttgtacaag
      421 ttcatagcgg tgtggtcatg ggctatccgt tgacccatca taactggcca gaaaccctgc
      481 atccgatgtg gatctcggat cttgcggtcg aataccgtga cgtgccgatt gttatcaacc
      541 atggcggcat ccagggctgg tggaccgaac ggttttacga ggaagcgctg ctggtcgcgg
      601 cctccaacga caatgtctat ctggaaaccg ggctgtggtg ggccgagctt taccgcaaag
      661 ccttgatcga tcccaatatc ggcgctgaaa aactaatgtg ggcgtgtgac tggggtgcca
      721 gtattccctt ccattcccag cccggcaatt atccgtcgag ctacgccgta cagattcgca
      781 gcaaaaaact ggtcaaacac caggtcgatg tctggggctg gagtttgaag cagttgctga
      841 aactggaatg cacccaagat gatctcaatt tagtcttagg tggaacagca gcccggattt
      901 acaaattgac ggtgccacat tcacgcttgt tccgtccggt cggcaaggag cttaatccgc
      961 aggaagaagg ccggattgac gtcgcaccca cctgctgttg agatcaactc actaaaatcc
     1021 tggacacttt aactttggca caaaggtcga gattgaggtt ggaggggctc gaatgggccc
     1081 aatccagctc caataaatca ttaaaaaata cgcctttgcc tttagcgacc ggcaagccgt
     1141 cgctccaatg accagcgagg gcagcaatcc caagaccttc cggatgaata ccctcagtca
     1201 gtttgatccg gccttcaaca gataggccgg tatcgctctc gaccttgacc gggttgccat
     1261 tctttaatcc cattttatta ccaatttcgg tattgatcgc gatggtatag gaaaacggat
     1321 caagctgggc agcttcgtcg agccacggat tttccatcgt gaagctattg gtatgaatgg
     1381 tatcgcggta ataaaaagca taaagatcaa agtcagtgtc ggtgcattca tgcgacagac
     1441 agggcagcca ttccggcaag gggtcgtaat gctccggcgg taaatcgagg ccccgaggtg
     1501 ctgctatggc attggctttt tcccacaaat cgctcatcca ttcgagatag attggcaccc
     1561 ggacatcgac aaaaggccgc caatagactt cttcaggttt cttcggccag ctgaggacgc
     1621 catttttctt aaaccactca agcccttttt caggcccaaa tttatctttc agatcggcat
     1681 cgcagatctc gacgtaaggg tatttttgac cgcgttcaag attataaggt ggcctgatgt
     1741 caagcagcgc gtttagcgcc gtattcatgt ccggcaaaaa gccaacccgc tcggccattt
     1801 ccatcaatac atcggcgaac agacgttctt ctttctcggg cccgacgacg ggctgacgaa
     1861 ccggccagct ccattttccc atgcctgcgg gatggctgaa tataaagggg aaattagatc
     1921 tcgaatcata ggtctgcagg taatcacaat cgggcagaac gatatccgag aacatcgtcg
     1981 tctcgtgcaa attaatatca aaagaggcga tgaatttgaa ctttttcaaa gaatcagcaa
     2041 ccgctgcttt attgcccatg ctcatcagca cattggtgcc gaagttaagc atcacttcgg
     2101 ggcggtaagg caggtcgaac ttctcccacc actcatcctg atcagatgaa ttaaggatgg
     2161 cggaaagcat gctcatcggg aataaatcct gtaggccgag ccgttcggga tgggccggct
     2221 cacttatcgg atagggttta tgaggcccca tccaggagcc ggtaatcatc aaaccgtctt
     2281 cagcgggtgt cggcgtatag gcgacgcggc cggtttcggg ataaccatga cacaccggat
     2341 tgaagcccag gcaaccaccc gctacatcgg ccgaaccaac caactgattc aacaaatcga
     2401 tggcaaacat gttgtaagtc gagtttttat gaccctgcga acccctaaaa gcgatagcgg
     2461 cagccgggcg atacggtacc gtaacaccgt caatgacgat ggtgctgcca atccgggcct
     2521 cggtggcaaa ttcagtcgcc agccgccgta tattgtcggt cgggatggtt gtgatttccg
     2581 cggcgcgctc cggcgtatag gatttgagat gctcgccgag cagggcaaaa gccggctgac
     2641 aggctacacc gccgacattg tattccccac caagcgccat catctccgga tcggcatcgt
     2701 caaaagtccg tgccgatttc gagctttcat cccagatcag cggcttattg ttcacgttat
     2761 cccgaacata gcgtttgtct ggaccgatca aatagggcgc attggtcttg gccttcaaat
     2821 agggcttatc gatagcaccc aattcgttga tcataatatt tgccatcgcc aaagccagag
     2881 ccgcgtcagt accgacccgg attggcaccc attctgttgc cttggcggaa gcaaaattcg
     2941 acatcggatc gataaccacc attttcatgc cacggtctct ggcatctgcc gcctgctgca
     3001 tgttggtggt tgaaacgtgg ccagcaccgt ggcccttgga agcaccaaaa tacatggcgt
     3061 aattacaatg ttcgaaatcc ggcacgatcg accacgaagc atgcataatg ccgctgatca
     3121 aatgagcgcc attaccgcaa tgcaaaccgc caccgccagc accgccattg cgtgagccaa
     3181 agctcgacgt aaaggcaaaa cacggcatca tgctcgattg cacggtggtg gtccgctgaa
     3241 ataccagctt acggggatca tcgtcacgca cccgcttcaa atgggtgcaa atttcatcaa
     3301 gcgcctcttg ccaggagatt tcctgccagc ccggatcaac atcaagacct ttttccggat
     3361 tggtgcggcg taacggcatt ttgacccggc cagggttata atgggtcatc aagccgctga
     3421 tgcccttgcc gcagagccgc ccattgccaa ccgctgaatc aggattacct tcgattttta
     3481 cgataacgcc atcaacccgg tgggcccgga tcgagcatga gccgtaacac agactgcatg
     3541 atgtcggcac ccagacatcc tgttcgctgg tattcggttc agatatatcc atcttgctcc
     3601 actccactat gctgactata gcacatcttg acgaataagc gtctgaacga tcgccatggc
     3661 agtcaagtat tgagccatat tttcacccct cattgatacg gtacgccaat tcacttcatt
     3721 gtttaatttg ataatttata tatatgatat tcatgaaata aataccgttc tacacgaaac
     3781 tactaatgaa agttagcgta agcaacttgg aaacaggcta gaagtttcca gcgatgtgct
     3841 cgatttctcg gcgaaaccac ttgtgtttga gatcattatc atggcggacg agccacgcca
     3901 ttttaccgtc aagtattccc gtatcgaccg gtaccggtag aactaccaga tcataatctt
     3961 cccgcagaac atcacaaaca cgctgggtaa aaacgccgat catgtcgctg cgtctcagca
     4021 tttgaggcac catggcgaaa ttggaaactg agacggcaat gcgccgggag agattaagtt
     4081 tagccaattt ccgatcaaaa agcccctttc gtgccccttt ggaatcgacc aatatgtgcg
     4141 gaaaagacaa aaaggcgtcg gtatcgaatt ttttccccat tttaaccgcc ggatgatctt
     4201 ttctgaccag gcaaataaat tttccttgga gaatagtttg
//
LOCUS       DASCNL010000102         1459 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000252076, whole genome shotgun sequence.
ACCESSION   DASCNL010000102 DASCNL010000000
VERSION     DASCNL010000102.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1459)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1459)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000252076"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="QF359_01280"
     CDS             <1..804
                     /locus_tag="QF359_01280"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HJO85572.1"
                     /translation="DRLLEPSIKVIEVSAKKSEEADYAESHIPGAINFWWKDLCWHET
                     DRQFVTPEQLAQRLGEVGISDEDRLVLYGEPVQYGTYAFWALTMAGHPNLLVLDGGRT
                     KWLAEDQPITSSVPETEPVDYEVQAPKDWMRLGRDNIRDNLGKGGRLLLDMRSPEEYS
                     GERVMEFGQFDHGAERGGRIPGARHLFFKELINEDDTFKSADELKAKLDAAGVDLDKV
                     DEIVCYCRLSHRATLAWTAMTFILGYEGVKIYDGSWTEWGSIVGFPVEK"
     gene            complement(1130..>1459)
                     /locus_tag="QF359_01285"
     CDS             complement(1130..>1459)
                     /locus_tag="QF359_01285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85573.1"
                     /translation="IPELTDHYSDVDCFDQVCAAVARGGDLVTSDDAGLTWEVMEESV
                     PESGPYMMNINLIDSNVAVVVSTDYAYWVDLNVETWSVMENPDSEYGLSWQDADGGQI
                     REVGGYF"
BASE COUNT          411 a          365 c          338 g          345 t
ORIGIN      
        1 gaccgcctgc tggaaccgag catcaaagta atcgaagtct cagccaaaaa gagcgaagaa
       61 gccgattatg ccgaaagtca tatccctggc gctattaatt tctggtggaa ggacctctgc
      121 tggcacgaaa ccgatcggca atttgtcacc cccgaacaat tggctcaacg cttaggcgaa
      181 gtcggcatca gcgatgaaga tcgtttggtg ctttatggtg agccggtgca atacggcact
      241 tatgcttttt gggctttaac catggcgggc catcctaatc tcctagtgtt ggatggcggg
      301 cgtaccaaat ggctggcgga agaccagccg ataaccagca gcgtgccgga aactgagcct
      361 gtcgactatg aagtccaagc gcccaaagat tggatgcggc ttggccgtga taatatccga
      421 gacaatcttg gtaaaggtgg gcggttgctt ttggacatgc gcagcccaga agaatattcc
      481 ggtgagcgag taatggaatt tggccagttt gatcacggtg ccgaacgcgg tggccgcatt
      541 ccaggtgctc ggcatctgtt cttcaaagag ctgatcaatg aggatgatac gtttaagtcg
      601 gccgatgagt tgaaggccaa attagacgca gccggcgtag acctggacaa agtcgatgag
      661 attgtctgct attgccgcct gtcgcaccgg gccaccctcg cctggaccgc aatgactttt
      721 atcctcggct atgagggcgt caaaatctat gacggttcgt ggacagaatg gggctcaatc
      781 gtcggctttc cggtggaaaa ataggaccat ttaacaagga taataccttg tttccggcta
      841 attcgtcccc aaatagtaat actacgaatg ataaaacatc catctattca tttttcaggt
      901 attgggacat agataaatct gacactgcga ctggtacttt tgcaggagta ttaaaatttc
      961 aagcatatga accagccaat acaactactg aaattggtct cggaataact tataaattct
     1021 aaaatcaacc aaacttaatt aggaattatc catccagata acagaaactt gcccgtctat
     1081 gcgtccgtaa gaaatacaaa gggtgttgag tagaacaaac cccactcccc taaaagtaac
     1141 caccaacttc cctaatctgt cccccgtcag catcctgcca agacaaacca tactcggaat
     1201 cgggattctc cataacgctc catgtctcta cgttaagatc tacccaatac gcatagtctg
     1261 tcgacacgac cacggcgaca ttggaatcaa tcaaattaat attcatcata tacggaccag
     1321 actcaggtac ggattcttcc atgacttccc aagtcaaacc tgcatcgtct gatgtaacaa
     1381 gatccccgcc cctcgccacg gccgcgcaga cctggtcaaa acaatctacg tcagaataat
     1441 gatccgttaa ctcgggaat
//
LOCUS       DASCNL010000103         1158 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000252544, whole genome shotgun sequence.
ACCESSION   DASCNL010000103 DASCNL010000000
VERSION     DASCNL010000103.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000252544"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..494
                     /locus_tag="QF359_01290"
     CDS             <1..494
                     /locus_tag="QF359_01290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HJO85574.1"
                     /translation="DEDLRYEKVIIMTDADVDGAHIASLLMTFFFKKMPQLIENGHLY
                     IAMPPLYRLSQGGQTLYAMDDAHKDILVEKEFSGRGKIEVSRFKGLGEMPPAQLKETA
                     MNPETRTLLRVTVPLRHTDDEKVEAKETAKLVDDLMGKKPELRLNFIQSHAAELEDGL
                     IDV"
     gene            711..>1158
                     /locus_tag="QF359_01295"
     CDS             711..>1158
                     /locus_tag="QF359_01295"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO85575.1"
                     /translation="MSRSFRDFIAVAEQQGLLRRITQAVDVSWEPACLAKWAFQALPD
                     KDRFGLLFDNVKGSDLTLCTGALGASRQAYALALDVEPEQINAQWENALVNPLKPVTV
                     ENAPCQEVVLKGDDAKLSDLPIPTWTPGKDAAPYITTTVMTRLVDSD"
BASE COUNT          289 a          297 c          294 g          278 t
ORIGIN      
        1 gcgatgaaga tttgcgctac gagaaggtca ttatcatgac tgatgctgat gtcgatggcg
       61 ctcatatcgc ctcactttta atgacattct tctttaaaaa aatgccacaa ctcattgaaa
      121 atggacatct ttatattgcc atgccaccac tataccggct cagccagggc ggccaaactc
      181 tctacgctat ggatgatgcc cacaaagata ttttggtcga aaaagagttc tccgggcgcg
      241 gtaaaatcga ggtcagccgc tttaaagggc ttggtgaaat gccaccggcc cagctcaagg
      301 aaacggcaat gaatccggag acccggacgc tgctccgggt taccgtgcca ttgcggcaca
      361 ccgatgatga aaaagtcgaa gccaaggaga ccgccaaact ggtcgacgat ttgatgggca
      421 aaaaacccga gcttcgcctc aacttcatcc aatcccacgc cgccgagctc gaagacggct
      481 tgattgacgt ttaaatttcc tgttccctgt tgacgattgg atcgacatta ttttacctat
      541 tcccctaccg tcaagctcgt gcatgacggt taggttatgg ctgtaccaga gatggatttt
      601 tgtgagcgcg ggtgatacaa ggcgtcccct gactctcagt tcccgcgtga cagtcatttt
      661 cccgagccat ataattttgc ggcgtcaaac ctaataaccg gggaaatttt atgagccgta
      721 gttttcgaga ttttatcgcc gtcgccgagc agcaaggttt gctccggcgg ataactcagg
      781 ccgtcgatgt aagttgggag ccggcctgct tggccaaatg ggcctttcaa gccctgccgg
      841 ataaagaccg tttcggtctt ttgtttgata atgtcaaagg ctcagatctg acactctgca
      901 ccggtgcact gggagcatca cgccaagctt atgccctggc gcttgatgtt gaaccagagc
      961 aaattaatgc ccaatgggag aacgcgctgg tcaatccgct aaaaccagta acggtcgaaa
     1021 acgcgccctg ccaggaagtg gtgcttaaag gtgatgatgc caagcttagt gatttaccga
     1081 tcccgacgtg gacgccgggt aaagatgcag cgccttatat tacgaccacg gtgatgaccc
     1141 gcctggtcga ttcagata
//
LOCUS       DASCNL010000104         1827 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000253278, whole genome shotgun sequence.
ACCESSION   DASCNL010000104 DASCNL010000000
VERSION     DASCNL010000104.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000253278"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="QF359_01300"
     CDS             <1..560
                     /locus_tag="QF359_01300"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HJO85576.1"
                     /translation="VLHQISETVDDPTDPGIARLINDMIDTLQDSAGIGLAASQVHVS
                     KRVVIFFAPESRSGEDEEESETELTIMINPVIEPLSDETNLDWEVCLSVPDLMGAVER
                     YSHIKYSWSTPAGKREERVASGFHARAVQHECDHLDGILYPMRMTDLKLLGYAEETNR
                     NIELLRRGHDLEEGFDPELQVAEED"
     gene            560..1216
                     /locus_tag="QF359_01305"
     CDS             560..1216
                     /locus_tag="QF359_01305"
                     /inference="COORDINATES: protein motif:HMM:TIGR02396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COQ9 family protein"
                     /protein_id="HJO85577.1"
                     /translation="MPRIKITEDRDHLLLAMLPHVLFDGWSQKALAAGQNDLGGKTPD
                     VQLLFPGGLREAAKHFGDYIDRQMLAELTGLELEKMPVRERIVTGVQVRLQLLEPHRE
                     SLHRLLTFLALPGNHFTGMQITSQTVDTIWHATGDKSTDFNYYTKRGLLAGVYGSTIL
                     YWLSDNSDDFADTHAFLDRRIAGILKIPKIQNKIKQRLKKVIAPLRRLQRPGFGKAFR
                     "
     gene            complement(1220..1711)
                     /gene="purE"
                     /locus_tag="QF359_01310"
     CDS             complement(1220..1711)
                     /gene="purE"
                     /locus_tag="QF359_01310"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HJO85578.1"
                     /translation="MAGFDPIVGIIMGSQSDWATMKHTTLTLEKLGIAYEAKIISAHR
                     TPDRLTKYTESARDRGLQVLIAGAGMAAALPGAAAALTPLPVLGVPIDGKVMDGLDAL
                     LAMAQMPGGIPVGTLAVGKAGAVNAAVLAASIIALSNEEVAASLDKFRADQTAGVAEE
                     PVD"
BASE COUNT          456 a          447 c          474 g          450 t
ORIGIN      
        1 cggttttgca tcagatctcc gaaaccgttg atgatcccac agatccagga atcgcacgtt
       61 tgatcaatga tatgatcgat acgttgcaag attctgctgg aattggtttg gcggcatcgc
      121 aggttcatgt ctcaaagcgc gtggtgatat tttttgcccc cgaaagccgg agcggtgagg
      181 atgaagaaga aagtgagaca gagttaacga ttatgatcaa tccggtcatc gaaccgctga
      241 gcgatgaaac aaatttggat tgggaggttt gtttgtcggt gcctgatcta atgggcgcag
      301 ttgagcgcta ttctcacatc aaatattcct ggtccacgcc ggcgggaaaa cgcgaggaac
      361 gcgtcgccag cggttttcat gcccgtgcgg tacaacatga atgtgatcac ttggatggca
      421 ttttgtatcc gatgcgaatg actgatttaa agctcttggg ttatgccgaa gaaactaacc
      481 ggaatattga acttttgcgc cgtggtcatg atctcgaaga aggctttgat cctgaactgc
      541 aagttgcgga ggaagattaa tgccgcggat aaaaattacc gaggatcggg accaccttct
      601 gctggccatg ctgccacatg tgttgtttga cggttggagc caaaaagcgc tggcggctgg
      661 gcaaaatgac ctcggcggca aaacacctga tgttcaattg ttgtttccgg gagggcttag
      721 ggaagccgcc aaacatttcg gtgattatat tgaccgccag atgctggctg aattgaccgg
      781 gcttgagctg gagaaaatgc cggtgcggga gcgcatcgtc accggagtcc aagtgcggct
      841 gcaactttta gaacctcacc gggaatcact tcaccggctt ctaacttttt tagcgctgcc
      901 cggcaatcat tttaccggca tgcaaatcac ctcgcagacg gtggatacga tttggcacgc
      961 caccggcgat aaatcgactg attttaacta ttataccaag cgtggtctgc tcgctggtgt
     1021 ctacggctca accattttgt attggttgtc agataattca gatgacttcg ctgacaccca
     1081 tgcctttttg gatcgccgga ttgcaggcat actgaaaatt cctaaaatcc aaaacaaaat
     1141 taagcagcgt ttgaaaaaag ttatcgcacc acttcgccgg ctgcagcgtc caggatttgg
     1201 caaggctttt agataggtat tagtctactg gctcttctgc gacaccggcg gtttgatcgg
     1261 ccctgaattt atcaagcgaa gcggcaactt cttcattact aagcgcgata atactagccg
     1321 ccagcacggc ggcgttgacg gcaccggcct tgccgactgc cagagtgcca accgggatac
     1381 cacccggcat ttgcgccatg gcgagaagag catccaagcc atccatgact ttgccatcta
     1441 tcggcacacc caaaacagga agcggagtca aagcagccgc agcaccaggt agcgcggcgg
     1501 ccataccggc accggcaatc agcacctgca atcctcgatc acgggccgat tcggtatatt
     1561 ttgtcaggcg atcaggtgtg cggtgagccg aaataatttt tgcttcatag gctataccca
     1621 gtttttccag ggtcagcgtc gtgtgcttca tcgttgccca gtcagactgg ctacccataa
     1681 taatgccaac aattggatca aacccggcca tcgataaact cctaatttca gccaattaag
     1741 gcgggaaggg cggcattata agaggcattt aacgctctgc aagcaaatgc cgctatcaat
     1801 ttctgtaatt tattggcatt tttaccg
//
LOCUS       DASCNL010000105         2115 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000254830, whole genome shotgun sequence.
ACCESSION   DASCNL010000105 DASCNL010000000
VERSION     DASCNL010000105.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000254830"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="QF359_01315"
     CDS             complement(<1..530)
                     /locus_tag="QF359_01315"
                     /inference="COORDINATES: protein motif:HMM:NF021351.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GldG family protein"
                     /protein_id="HJO85579.1"
                     /translation="MQALENMDRKKLTIAGLVVAAIFLFFVNIWSSLEIQSVQLDLTE
                     NKLYTLSDGTKEVIKTIDEPITFRLYYSSTFGEISPAHGNYFKRVRELLEHFQVISGG
                     KINLKVINPVSFSVEEDEAVKFGIQGVPLDQSGELGYFGMAAVNSTDDRKNIPFFNPQ
                     REQFLEYDLTRLVFELA"
     gene            complement(541..1275)
                     /locus_tag="QF359_01320"
     CDS             complement(541..1275)
                     /locus_tag="QF359_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO85580.1"
                     /translation="MSNCWVIIKRELGAYFSTPLAYVFIVIFLALSGALTFFMGAFFE
                     RGQADLASFFSFHPWLYLFLIPAVSMRLWAEERKTGTVELLLTLPTPTWVVVIGKYLA
                     AWAFIGIALVLTFPLWITVNFLGTPDNGVIVASYLGSLVMAGGYLAIGSCLSAVTKNQ
                     VIAFILTAVVCFLFLMSGVELVQSFFQGWAPSFVLEALASMSFLTHFNTIIRGVIDLR
                     DVVFFGSIIGVFLYFNAAVIDLTRGS"
     gene            complement(1298..2032)
                     /locus_tag="QF359_01325"
     CDS             complement(1298..2032)
                     /locus_tag="QF359_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO85581.1"
                     /translation="MTTGDTMISIDGLTKDFGPLRAVDNISFDVKKGEVLGFLGPNGA
                     GKSTTMKMVTGYLLITNGKASVCGFDVENHALEAKTKIGYLPEGAPLYGDMTTISFLN
                     FIAEIRRLSGDAKQKQVAYAIDKLQLQPVINQPIDTLSKGFKRRVGFAQAILHDPEVL
                     ILDEPTDGLDPNQKHQVRQLISEMAVDKAIIISTHILEEVEAVCTRAVIIAEGKIVFD
                     DTPAKLKGQSSTGNLDDVFRRLTLVN"
BASE COUNT          626 a          529 c          451 g          509 t
ORIGIN      
        1 gccaattcaa ataccagacg ggttagatca tattcgagga actgctcccg ctgtggatta
       61 aaaaaaggaa tgtttttacg gtcatccgtc gagttaaccg cggccatacc gaaatagccg
      121 agctcaccag attgatcgag cggcacacct tggatgccaa acttcaccgc ttcatcctct
      181 tcgaccgaaa aagataccgg attgatgact ttaagattta tcttaccacc agaaatcact
      241 tggaaatgct ccagcagctc cctgactcgc ttgaagtagt tgccgtgggc tgggctgatt
      301 tcgccgaaag tcgacgagta atacagccgg aaggtaattg gctcatcaat tgtcttgata
      361 acctccttgg tgccatcaga cagggtgtag agtttgtttt ccgttaaatc caattgcacc
      421 gactgaattt caagcgacga ccaaatatta acaaaaaaca ggaatattgc tgcgacaacc
      481 aaaccggcaa tcgtcagctt tttacgatcc atgttctcta atgcttgcat ggttctaacc
      541 tcacgatcct ctggttaaat caatgacggc ggcgttgaaa taaaggaaaa caccaatgat
      601 cgagccgaag aaaacgacgt ctctcaaatc gatcacgcca cggatgatgg tattgaaatg
      661 ggttaagaag ctcatcgacg ctaaggcttc cagcacaaat gaaggtgccc agccctggaa
      721 gaaggattgc accagttcaa ccccactcat cagaaaaagg aagcaaacga cagccgttag
      781 gataaaggca atcacttggt ttttagtaac cgctgataag caagagccaa tggcgagata
      841 gccgcccgcc atcacgaggc tgccaagata gctggcaaca atcacaccat tatccggcgt
      901 accaagaaaa tttaccgtga tccacagcgg aaaagtcagt accaaggcaa ttccgataaa
      961 cgcccaagcc gctagatact taccaatcac gacaacccag gtcggcgtcg gtaaggtgag
     1021 cagcaactcg accgtcccgg ttttgcgttc ttcagcccac aagcgcatcg atacagctgg
     1081 tatcaaaaac aagtaaagcc agggatgaaa gctgaaaaat gacgctaaat ccgcctggcc
     1141 gcgttcaaaa aaggcaccca taaaaaatgt cagcgcgcca ctgagcgcta gaaaaattac
     1201 gataaagaca taagcgagcg gcgtcgaaaa atatgcacct aactctcttt taataatgac
     1261 ccaacaatta ctcattgccc ggtagtctcc caaaattcta attaacaagt gtgagccggc
     1321 gaaacacatc atccaaattg ccagttgatg actgtccctt caattttgct ggagtatcgt
     1381 cgaagacgat tttaccctca gcgatgataa cggcccgcgt gcaaactgcc tcgacttcct
     1441 caagaatatg cgttgaaatg atgattgctt tgtcaacggc catttctgag atcaactggc
     1501 gaacttgatg tttttgattt ggatcgagcc catcggtcgg ttcatcaagg atcagcactt
     1561 cagggtcatg caaaatcgcc tgggcaaatc cgacgcggcg tttaaaacct ttagacaacg
     1621 tatcaatcgg ctggttaatc accggctgta actgcaattt atcaatcgca taggcgactt
     1681 gcttttgctt ggcatcgccc gaaagtctgc gaatttcagc tataaagttc aaaaaactga
     1741 tggtggtcat atcaccataa agcggtgcac cttccggtaa atagccaatt ttggttttgg
     1801 cttcgagcgc atgattttct acatcgaagc cgcagaccga agctttgcca ttggttatca
     1861 gcagataacc ggtgaccatt ttcattgtcg ttgatttacc agcgccgttc ggacctaaaa
     1921 agcccaagac ttcgcctttt ttgacatcaa aagaaatatt atcgacggcc ctgagcggtc
     1981 caaaatcttt ggtcagcccg tcgatagaaa tcatggtatc gcctgtcgtc atcccagatg
     2041 tttccccata atactttgtg tctcattcat aatttcaagc cacataattt tgtaatccac
     2101 cccaaagctc aaata
//
LOCUS       DASCNL010000106         2750 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000255145, whole genome shotgun sequence.
ACCESSION   DASCNL010000106 DASCNL010000000
VERSION     DASCNL010000106.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000255145"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1201)
                     /locus_tag="QF359_01330"
     CDS             complement(<1..1201)
                     /locus_tag="QF359_01330"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85582.1"
                     /translation="MAVSRKEQTRTAWLETIEKHKSDTHSPATDQIWSEKLECASRDE
                     LIAIQNDKLKMVTPFLYENSNFYRHRFDRLDLTPTDIQTVDDLTKWPVVDKSEMMEDA
                     LAHPPYGTYTTMDDELWQKRGWMMFSSSGSSGVPRVFRYSHIDRDLWEWANARAIYSF
                     GVRPTDTVFVASGYGPHVFAWGVQYSLQRMNVACIPGGGMTTDMRANIVDRFKPTVLC
                     CTTSYALHLGRVMQENGFDPAASSIRMLFVGGEPGTGIINTRNRLKELWGAEMREFYG
                     CTEVAPHSGGYSCSHAEISADMIATHLMEDHQIWELVDPDTKDPVQEGERGITVCTSL
                     HSESSPQLRFNVGDYTVYSTEQCGCGRTHVRAMGSFAGRSDDLINLRGIKMYPVQLEQ
                     AVRAVPDI"
     gene            complement(1751..2002)
                     /locus_tag="QF359_01335"
     CDS             complement(1751..2002)
                     /locus_tag="QF359_01335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85583.1"
                     /translation="MSRIDLVDLDIDDDEIQNMFTAVTAMLGRVPNSYKVLAHSPLVA
                     KMLVPFNAVVQREGAGSVLSTKIKEMVVIKTSHLNGCKY"
     gene            complement(2141..2455)
                     /locus_tag="QF359_01340"
     CDS             complement(2141..2455)
                     /locus_tag="QF359_01340"
                     /inference="COORDINATES: protein motif:HMM:NF013777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJO85584.1"
                     /translation="MSDVEQNTLSIDNAAQLSPGNFDLLSTRPAQTVIGYLSNKWNVL
                     IIRRLSRKTMHYSELRRDIGDISQKMLTQTLRYLERVGLVERKIYPVVPPKVEYSLTE
                     LG"
BASE COUNT          685 a          677 c          654 g          734 t
ORIGIN      
        1 caatgtccgg taccgcacgc actgcttgct cgagttgaac cggatacatt ttgatgccgc
       61 gcagattaat taaatcatct gaccggccgg caaaagaccc catcgcccgc acatgggtgc
      121 gcccgcagcc acattgctct gtcgaataga ccgtgtaatc accaacattg aagcgcaatt
      181 gcggtgagct ttctgaatgg agactggtgc agacggtgat tccccgctca ccttcttgaa
      241 cgggatcctt tgtatcggga tcgacaagtt cccatatttg atggtcctcc attaaatggg
      301 tggcaatcat atccgctgag atttccgcat gcgaacagga atagccgcca ctgtgcggag
      361 ccacttcggt acagccataa aattcccgca tctcagcccc ccaaagctct ttgagccggt
      421 tgcgggtatt gatgatgcca gtgccgggtt cgccaccgac aaacaacatg cggatggagc
      481 tcgctgccgg atcaaacccg ttctcctgca taacgcggcc cagatgtagc gcatatgaag
      541 tcgtgcagca caacacggtc ggcttaaagc gatcaacgat attggcgcgc atatctgtcg
      601 tcatgccgcc gcctggaatg caggcaacgt tcatccgctg taacgagtac tgtacgcccc
      661 aggcaaacac gtggggacca tagccggaag caacaaagac cgtatcggtt ggcctgacac
      721 caaacgaata gatcgcccgc gcattcgccc attcccagag atcacgatca atatgagaat
      781 agcgaaaaac gcgcggcacg ccgctggagc ctgaagagga aaacatcatc cagccgcgtt
      841 tttgccaaag ttcgtcatcc attgtcgtat aagtgccgta aggcggatgc gcgagcgcat
      901 cttccatcat ttcggattta tcaacgaccg gccatttggt cagatcatca accgtctgga
      961 tgtcagttgg cgtgagatcg agccggtcaa agcggtgccg gtaaaaatta ctgttttcat
     1021 agagaaacgg cgtcaccatt ttgagcttat cattttgaat ggcgatcaat tcgtcgcgac
     1081 tggcgcattc cagtttttcc gaccaaatct gatccgtcgc cggactgtgg gtatctgatt
     1141 tatgcttttc aatcgtttcg agccaggcgg tgcgggtttg ctctttgcgg ctaacggcca
     1201 ttatcatctc ccaaattatt taaagtcttt ttgattggtc tatcaattta ttaatatact
     1261 ttcccggctg agaataacca gagttataac cccttttttt aaaggatata aaaaatatgg
     1321 cgggtttatc tatatccgtc acctaatccg ggttcggttc agggaaactt tctggccagt
     1381 tttcaaccgt tgtttggagg taggatttta ctttatccgg attgaggcgg accgatcttt
     1441 taatcttatc tacttcgtct ttctcttcaa ctggaatttt aagagagtcc gttaagcgat
     1501 tgaaaaaatt aaagaaacag cagatcattg taaggtccac catctcttgc tcggtgaact
     1561 cttggtggac ctgttcatag atgccattgt cttctttggc ggtgttctgg gtaacatggg
     1621 tagcccataa aatggccgcc ttttcgcgcg cgttgaagag gtcggactca aggtattcat
     1681 ccgtgctaat ttcgatggtt tgttcgtcgg taatgccagc cgcttgacca agcgacgtgt
     1741 tatgggcaaa tcagtatttg cacccattga gatggctggt cttgatcacc accatctctt
     1801 taattttggt cgagagcaca gaaccggccc cttcccgctg gaccacggcg ttaaacggca
     1861 ccagcatttt ggccaccagc ggtgagtgcg ccagaacttt atatgagttt ggcacccgtc
     1921 ctagcatcgc cgtcacggcg gtaaacatgt tttggatctc atcgtcgtca atatcgagat
     1981 caactaaatc tatgcgcgac atgtagttct cctgaataaa tatccggggc tgacccagct
     2041 aactagttca aatatattat aaattgttgt cccggttgtc atatgacgcg atggcgtctt
     2101 cgacgtggtt aatgttctca ttgttcggct caacgagagt tcaaccgagc tctgtcagcg
     2161 aatattcaac ttttggcggc acaacggggt aaatcttacg ctcaaccaga ccaactcgct
     2221 caaggtagcg caaagtctga gtcagcattt tctgcgaaat atcgccaata tcccggcgca
     2281 gttctgaata gtgcatggtt ttccgcgaca atcgccggat aatcagcaca ttccatttat
     2341 tggacaaata gccaatgacc gtttgcgctg gacgtgttga cagcaaatca aaatttcccg
     2401 gcgacagttg ggccgcattg tctatcgaca atgtattctg ttctacgtct gacatacaat
     2461 taattccaaa attaactaac tctccttttg gtaagtaccc tacttttaag atagtacatt
     2521 atcaaatagc atgtggcgga ttatgcatag taataatcgt ttgggaatat tattttaaac
     2581 cctgacgaaa ttaacttagg gagcacagat aaatggacca aggcatccgc acggtctggt
     2641 atgcacaata ccggatgccg gcaatggcga gaatgccggg ctccatcaat accaggaaat
     2701 tggtgtcggt cgcgggctgg gccaagaatg ctgtgatgta tgagtttatt
//
LOCUS       DASCNL010000107         1025 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000255442, whole genome shotgun sequence.
ACCESSION   DASCNL010000107 DASCNL010000000
VERSION     DASCNL010000107.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000255442"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..746
                     /locus_tag="QF359_01345"
     CDS             <1..746
                     /locus_tag="QF359_01345"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO85585.1"
                     /translation="TATDKGDHWEINGQKMWISNAHTGDWGLLYAITNREAGHKGMTC
                     FIFNPKETEGVITSAIETKLGLHCAPTGEIAFDGAKFPKDAVLGEVGQGFQICMWQLN
                     NTRIGCAAGAVGIGGGATEAAINYANERTQFGKKIGSYQMVQAQIADMVAEHDAAKLL
                     LYRAAWLKDQGLPNQHETSMAKLFASEAAVHAASDGMKIFGSYGYSTEYPAERFLRDA
                     HSLRVVEGTSNIQKLIIAGISLGDSENRV"
     gene            771..>1025
                     /locus_tag="QF359_01350"
     CDS             771..>1025
                     /locus_tag="QF359_01350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85586.1"
                     /translation="MARKQTPLRPYFEEMPAIGKALSDGVIKRSQENVDLIKAQDEIV
                     VREVERVANAGIPSEKIHSRGSLTVYDRLEYLVDEGTWNPL"
BASE COUNT          262 a          246 c          286 g          231 t
ORIGIN      
        1 ctacggcgac ggataagggg gatcactggg aaatcaatgg tcagaaaatg tggatttcca
       61 atgcccatac cggcgattgg ggtttgctgt atgccatcac caaccgcgag gcgggccata
      121 aaggcatgac ttgcttcatc ttcaatccca aagaaaccga aggggtcatc acctcggcga
      181 ttgagactaa gcttggcttg cactgcgcac cgactggtga aattgccttt gacggagcta
      241 aatttccgaa ggatgcagtt ttgggagaag ttggacaagg tttccagatt tgcatgtggc
      301 agttaaataa cacacggatc ggctgcgctg ctggtgctgt cggaattggc ggcggcgcta
      361 ccgaagcagc gatcaattac gccaacgaac ggacccagtt cggcaagaaa attggttctt
      421 accagatggt gcaggcgcag attgccgata tggttgccga acatgatgcc gccaagttgc
      481 tgctttaccg tgccgcttgg ctaaaagatc agggactacc caaccagcac gaaacctcga
      541 tggccaaact gtttgcctcc gaagccgcgg tccatgctgc gagtgatggt atgaaaatct
      601 ttggtagtta tggttattcc accgaatatc cagcggaacg gttcttgcgt gacgcccatt
      661 cgctccgggt agtcgagggt accagtaata ttcaaaagct gattatcgcc ggcatctcgc
      721 tgggagattc cgaaaaccga gtgtaaaatt tataagaggt acaatagacc atggcccgca
      781 agcaaacacc gctacgtcct tacttcgagg aaatgcccgc aatcggcaag gcactgagcg
      841 acggcgttat caaacgttcg caggaaaatg ttgatctcat caaagcacag gatgagattg
      901 tcgtcaggga ggttgagcgg gtcgcgaacg ctggtattcc gtctgaaaaa attcactcgc
      961 gtggcagttt gacggtttac gaccgcctcg aatatttggt tgacgagggg acctggaacc
     1021 cgctt
//
LOCUS       DASCNL010000108         1143 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000255739, whole genome shotgun sequence.
ACCESSION   DASCNL010000108 DASCNL010000000
VERSION     DASCNL010000108.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1143)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1143)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000255739"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="QF359_01355"
     CDS             complement(<1..747)
                     /locus_tag="QF359_01355"
                     /inference="COORDINATES: protein motif:HMM:NF012993.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HJO85587.1"
                     /translation="MGDDLKTIKLAAAQINSVFLDREASVDKACDFIREAGQKGADII
                     GFPEGFIPAHPAWYGYLPANGGKSIPLAQELFKNAVEIPGAATDKLGQACRDGNITAV
                     IGVCEKYANTTGTMFNTQIFIGPDGALLGKHQKLVATVGERLVHTGGYGDTLTTFDAP
                     FGAISGLICGENSNPLAVYAMMAMHTMVHVAAWPPHFGGTRRMHKDIRAVTPGLAYSL
                     GAFVINSASTVTDELIDLYAATDEDREHLAS"
BASE COUNT          294 a          283 c          262 g          304 t
ORIGIN      
        1 agacgccagg tgctctcgat cttcatcagt cgcggcgtaa agatcaatca actcgtcagt
       61 gaccgtgctg gccgaattga tgacaaacgc gcccagggaa taagccagtc cgggggtcac
      121 cgctcggatg tctttatgca ttcttcgcgt gcccccgaaa tgaggtggcc aggcggccac
      181 gtgtaccatg gtgtgcatgg ccatcatggc gtagacagcc agcggattgg aattctcgcc
      241 gcaaatcagc ccactaatgg ctccgaaagg cgcatcaaaa gtagtcaggg tgtcgccata
      301 gccgcctgta tgaaccaatc tttcacccac cgtagccacc agtttttgat gtttgcctaa
      361 taaagcgccg tcaggaccaa tgaatatttg ggtgttgaac atggtgccgg tggtgttggc
      421 gtatttctcg cacacgccga tgacggcggt aatattgccg tcgcgacatg cttgacccaa
      481 tttatcggtg gcggcaccgg gaatttcgac agcgtttttg aacaactctt gggctagagg
      541 aatacttttg ccaccgttgg ccggcaaata accataccag gcgggatggg ccgggatgaa
      601 accttcggga aaacctataa tatcagcgcc cttctgaccg gcttcgcgga taaaatcaca
      661 ggccttgtcg accgaggctt cccggtccaa aaataccgaa ttaatctgcg cagccgccaa
      721 tttgatggtt ttcagatcat cgcccattgc tcatccctcg cattaaagat agttgcttag
      781 aaaacatatt atcaatcgag acgctttact tccagatatt cgttaatcta gaacgatttg
      841 acagcgatca tggtcagttc tgccgcagag taaattagtt gtatcgcgcg cacgaaataa
      901 ttccgataac tccacgcttc cgaacctctg caaaaggcca gagtggtatc ccgctgccaa
      961 taaaagcagc tatattctaa tataattatg ggtgttcaaa tacaattatt ctagtagttg
     1021 ttacatatta ttttcaattt tattaaatta tggatgatca cagttataag ctataaatct
     1081 cataattatt gtaatttgcc tggtatcgat caacgctttt ctccagccct ttatcatttt
     1141 gcc
//
LOCUS       DASCNL010000109         1759 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000256151, whole genome shotgun sequence.
ACCESSION   DASCNL010000109 DASCNL010000000
VERSION     DASCNL010000109.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1759)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000256151"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(127..846)
                     /locus_tag="QF359_01360"
     CDS             complement(127..846)
                     /locus_tag="QF359_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85588.1"
                     /translation="MPYFILGIALLIGFLLAARWYVNAPPSTLVKVLKWSAIILAAAI
                     FLFFLIAGPKLWALWALPVLLPWFMRARAAARMAKNWSRMAGSSSGGTDGAPGHSSEI
                     ETKFLNMYLDHQSGEMNGEVRQGSFTGKTLRNLSLDDLLALLVECREDEQSVQVLTAY
                     LDRYHGDQWREQAGSALGSAGKGEMTAEKAHEILGLEPGASEDKIKEAHHRLPSKIHP
                     DHGGSTFLATQINQAKDFLLG"
     gene            complement(865..1575)
                     /locus_tag="QF359_01365"
     CDS             complement(865..1575)
                     /locus_tag="QF359_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HJO85589.1"
                     /translation="MSDNKLPTKTSSEDVQAFLQKVAATPVRKASSEKGRLIFAMDAT
                     ASREPSWDRACHLQGEMFQETAAMGGLEIQLAYYRGFGEFRASKWAGAPEDLLRLMTA
                     VHCLAGETQIKKVLRHTLNETKKCSVDALIFIGDCVEEDVDVLGAVAGELGLLGVPAF
                     VFQEGADPIAEFAFKQIARLTNGAYCRLDTNSAQTLRELLRAVAVFAAGGRPALENMA
                     QKEGGAILQIANQVSKPG"
BASE COUNT          458 a          483 c          391 g          427 t
ORIGIN      
        1 gatttgtagt tgctgacaat gtcagacaat ttacaatttt ttgcgagtgc cggattggca
       61 ctgccggaca tgaaaccggt ggcaataaca ctgccagcga tcataagtga aataatcagc
      121 atggtatcaa cccagcaaaa agtccttcgc ttgatttatc tgcgtcgcca aaaaagtcga
      181 gccaccatga tcgggatgaa ttttacttgg caatcgatga tgggcttctt tgatcttatc
      241 ttcactggca ccgggctcaa gacccaatat ttcatgggcc ttttcagccg tcatttcacc
      301 tttacctgct gatcctagcg ccgaccccgc ctgctctcgc cactgatcac catgataccg
      361 gtcaagatag gcggtcagta cttgtacaga ttgctcgtct tcccggcatt caaccaagag
      421 agccagcaga tcatccaaag acaaattcct taaagtctta ccggtaaaac tgccttggcg
      481 cacttcgccg ttcatttctc cagactggtg gtctagatac atatttagaa attttgtttc
      541 aatttcggag gaatgtcccg gcgcaccatc cgtgccgcca gaactactac cagccatgcg
      601 cgaccagttt tttgccatcc gcgctgccgc tcgagcacgc ataaaccagg gcagtaatac
      661 cggcaatgcc cacaaagccc atagtttggg accagcaatc aggaagaata agaatatcgc
      721 cgctgccaga ataatcgccg accatttcaa tactttcacc aaggttgatg gtggggcgtt
      781 tacataccag cgcgcagcaa gcagaaaacc gatcaacagg gcgataccaa ggataaaata
      841 aggcatgact tagtctacac tcatctagcc cggttttgaa acttggttgg caatttgcag
      901 aatagcgccg ccctcttttt gcgccatatt ttcaagcgca ggccggccac cagcggcaaa
      961 tacggcgacg gcccgcagta attcgcggag cgtttgcgca ctgttagtat ccaaccggca
     1021 ataagcgcca ttggtcagtc tggcaatctg tttgaaagca aactcggcaa tcgggtcggc
     1081 cccttcttga aagacaaagg ccggtacgcc aagcagtccc aattcaccgg cgaccgcccc
     1141 taagacgtcg acgtcttcct caacacagtc accaataaag atcaacgcat cgaccgaaca
     1201 ttttttcgtt tcattcaatg tgtgacgcag gactttctta atctgggttt caccggcgag
     1261 acaatgaacg gcggtcataa ggcgtaataa atcttccgga gcaccggccc atttgctcgc
     1321 ccgaaattca ccaaacccgc ggtaataagc aagctggatt tccaggccac ccatcgccgc
     1381 cgtttcctga aacatctcgc cttgcaaatg gcaggcgcga tcccagctcg gctcccggct
     1441 cgccgttgca tccatggcaa aaataagacg gcctttctca ctcgacgcct tgcgcacagg
     1501 tgttgccgca accttctgca aaaaagcctg aacatcctcg ctggatgttt ttgtcggcag
     1561 cttattatca ctcatatagt tcccaatcta tctcgccggt atacttcttg agatatgcca
     1621 aaaattaacc gaggcaagag tctaaccttg ccccgatccg aaaacaacat ttcacctgtt
     1681 tagattggag agtgctctat ttggtgtgat gtaattttcc ttttggttta aaggcatgga
     1741 aggtaaaaga gaaagtgac
//
LOCUS       DASCNL010000110         1104 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000259114, whole genome shotgun sequence.
ACCESSION   DASCNL010000110 DASCNL010000000
VERSION     DASCNL010000110.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1104)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000259114"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..832
                     /locus_tag="QF359_01370"
     CDS             <1..832
                     /locus_tag="QF359_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FumA C-terminus/TtdB family hydratase beta
                     subunit"
                     /protein_id="HJO85590.1"
                     /translation="IYRDLELEKDVHKLTQDIGMGAQFGGKYFCHDVRVIRLPRHGAS
                     CPVGIGVSCSADRQVLGKITKDGIFLEELDTNPARFLPMVTDEHLNEDVVKIDLNQPM
                     DNVRAELSKHPIRTRLSLTGSMIVARDIAHAKLKERIDNGEGLPQYAKDNAVYYAGPA
                     KTPKGMASGSFGPTTAARMDSYVDLFQENGGSMVMLAKGNRSQAVTDACKKHGGFYLG
                     SIGGPAAQLTQDCIKKIEVLEYEELGMEAIWKIDVEDFPAFIIVDDKGNDFFEEFRAK
                     "
     gene            complement(864..>1104)
                     /locus_tag="QF359_01375"
     CDS             complement(864..>1104)
                     /locus_tag="QF359_01375"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJO85591.1"
                     /translation="GPVLNIEQMTANEQTLARDMVADVGSSEGSSLRVLGHPVKYSET
                     PATIQRRAPGLGEHTEEVLKEFGFSVEEIAELLFR"
BASE COUNT          278 a          300 c          277 g          249 t
ORIGIN      
        1 aatttaccgt gatctcgagc ttgaaaaaga tgttcacaag ctgacccagg atatcggcat
       61 gggggcgcag tttggcggca agtatttctg ccacgatgtc cgggtaattc gtctaccgcg
      121 tcacggcgct tcgtgtccag tcggcattgg cgtctcatgc tcagcagacc ggcaggtgtt
      181 gggtaaaatc accaaggacg gtattttcct ggaagaattg gataccaacc cggcccgctt
      241 cctgcccatg gtaacggacg aacatctcaa cgaagatgtg gttaaaatcg atctcaacca
      301 gcccatggat aatgtccgtg ccgagctttc caaacatccg atcagaaccc ggctgtctct
      361 caccggatca atgattgtcg cccgcgatat tgcccatgcg aaactcaaag aacgcatcga
      421 taacggcgaa ggtttgccgc aatatgccaa agacaacgcc gtctattatg ccggcccagc
      481 caaaacacct aaaggcatgg cctcaggctc gtttggcccc actactgccg cccgtatgga
      541 cagttatgtt gatctgtttc aggaaaatgg cggctcgatg gttatgctgg cgaaaggcaa
      601 ccgctcacaa gcggtcactg atgcctgcaa aaaacacggt ggtttttacc ttggctccat
      661 tggcggcccg gccgcgcagc ttactcagga ttgcatcaag aaaatcgaag tcctcgaata
      721 tgaagagctc ggcatggaag cgatttggaa aatcgatgtt gaagacttcc cggccttcat
      781 catcgtcgac gacaaaggca acgacttctt tgaggagttc cgggcgaagt aggtagattt
      841 gacaagtaaa attaagtaaa ctgtcaccga aataacaact cagctatctc ctccactgaa
      901 aaaccaaact ctttcagcac ctcttcagta tgttcgccca acccgggcgc acggcgttgg
      961 attgtcgccg gtgtctcaga atatttaacc ggatggccga gtacgcggag tgaactgccc
     1021 tcggacgagc caacgtcggc gaccatatcc cgcgctagag tttgctcatt tgccgtcatt
     1081 tgctcgatat tgagcaccgg accc
//
LOCUS       DASCNL010000111         1205 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000266427, whole genome shotgun sequence.
ACCESSION   DASCNL010000111 DASCNL010000000
VERSION     DASCNL010000111.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000266427"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="QF359_01380"
     CDS             <1..434
                     /locus_tag="QF359_01380"
                     /inference="COORDINATES: protein motif:HMM:NF013481.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase C-terminal
                     domain-containing protein"
                     /protein_id="HJO85592.1"
                     /translation="TGISMMVTAQGADHTAGNIPTFQCKDKTTEELVAASLDIQEDCA
                     AADSLGLCLFGRSVTNVNQEFIVGALNDAHGTDLPITFMKDLGRETLSLEWQFNKDAG
                     FTEADDELPQFFYDEILAGRDVAARHHTVEVNTAFRDLIEK"
     gene            721..969
                     /locus_tag="QF359_01385"
                     /pseudo
     CDS             721..969
                     /locus_tag="QF359_01385"
                     /inference="COORDINATES: protein motif:HMM:NF020317.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
BASE COUNT          313 a          266 c          295 g          331 t
ORIGIN      
        1 ttaccggtat ttccatgatg gtaaccgcgc aaggcgccga tcacacggcg ggtaatattc
       61 caaccttcca atgcaaagat aaaacaactg aagagctggt tgccgccagc ctggacatcc
      121 aggaagattg tgcggcagct gactcacttg gtctctgcct ctttggccgt tcagttacca
      181 atgtgaatca ggagtttatt gttggcgcgc tgaatgatgc tcatggtacg gacctgccaa
      241 tcacgttcat gaaagatttg ggccgggaaa cactctcatt ggaatggcaa tttaacaaag
      301 atgctggctt taccgaagct gatgatgagt tgccgcaatt tttctatgat gaaatattag
      361 ccggtaggga tgttgctgca cgccatcaca cagttgaagt taacacggcg ttccgcgatt
      421 taatcgaaaa gtaaaacact tgaacaataa actttagaag agcgctggac cgattaattt
      481 ggtccggtgt tttttgcgcc tggaattcga atctttccaa atctccacta ttatcggtta
      541 tgctgcatat cccgttattc atatataata atgggagagg ctttgaagcc caaaattaac
      601 cagtctaggg gggggtatgc ctacatccat ttatctcatg agcttaactg attagggtat
      661 taaaggtatc aaagacgcgc caaatcggcg ggccgaatct gaaaaaaagt aacagatctt
      721 ggaggttcca tcgttggcag ttatctgacg atgggcgcct atgatcgtct gctgattgtt
      781 gatttgcctg ctggtgatgc ggcggtgaaa ttagcctttg gcatgggtac gaccggaaat
      841 gtacgcacta cgaccatgag cggctatagt ggcgatgaag ccatggatta ctttgcaacg
      901 tcacttcctt ggcacgttcc atttcctcta ccggcattgg ctggccaaag aaaattgtcg
      961 cggtcttaac aataccgtcg caatcccggt aaataggtag gctttcatcc gcctcaaacg
     1021 cctgcatgat cggttacaat tcgtggcggg tgccacaatc tagacacacg caataagttt
     1081 tattaccata ctgatcgatc atctgcgcgt cggagatacc cgatttttga tgcaagccat
     1141 caatgttctg ggtgataata gtctttattt ggccggtttg aactaaatga gcgatcgctt
     1201 gatgg
//
LOCUS       DASCNL010000112         1069 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000267131, whole genome shotgun sequence.
ACCESSION   DASCNL010000112 DASCNL010000000
VERSION     DASCNL010000112.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1069)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1069)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000267131"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1069)
                     /locus_tag="QF359_01390"
     CDS             complement(<1..>1069)
                     /locus_tag="QF359_01390"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85593.1"
                     /translation="VYGLAENSVGLAFPPLERGPRIDTIERETFMKRGRAVVAEGSGD
                     AIEVPSSGKALPGHQIRVIGPSGYELPERQEGRVQFHGPSASAGYFRNPDATADLLAG
                     EWRNAGDLGYMVDGEIFITGRQTDLIIRAGRNIFPAELEEAVGSLDGIQKGSVAVFSS
                     PDAATGTECLVVMAESRRRNQDAQEKLNAEIRSIFLDLTGTPPDAIELVPPRTVPKTS
                     SGKIRRQSARTLFEQGIPAGQSRFSVKWQIYRMLLAGLKPSLQRVLRSSIAWSYAAYM
                     YLLMAIAAPFTWIIVAVLPGKKLRFAFVRAALGILWWLGGIKILINGYENIPKGQRFL
                     FTVNHASYIDGPVLVSALPGEP"
BASE COUNT          240 a          300 c          281 g          248 t
ORIGIN      
        1 taggttcgcc gggcaaggcc gagaccagca ccggcccatc aatgtagctt gcgtggttta
       61 cggtaaacag gaaacgctga cctttgggaa tattttcata cccgttgatt aaaattttaa
      121 taccgcccag ccaccacaat atcccaagcg cggctcgcac gaaggcaaac cgcaatttct
      181 tgccgggcaa caccgccact atgatccagg tgaagggtgc cgcgatcgcc attagcaaat
      241 acatgtaagc cgcataactc caggcaatcg aggagcggag aactcgttgg agacttggtt
      301 tgagtccggc caacaacatc cggtaaatct gccatttgac ggaaaaacgt gattgcccgg
      361 ctggtatacc ttgctcaaac aatgtccggg cggattgacg ccgtatttta ccgcttgatg
      421 tttttggcac cgtgcgcggt gggaccagtt caatggcatc gggtggcgtg ccggtaaggt
      481 cgaggaaaat cgatctaatt tccgcgttta atttctcctg tgcatcttga ttgcggcgcc
      541 ggctttccgc catcaccacc aggcactcgg tgccggttgc cgcgtccggg ctgctgaaga
      601 ctgcaacact gcctttctgg atgccgtcga gactgccaac agcttcttct aattcagcgg
      661 gaaagatgtt tcggccggct cgaatgatca ggtctgtttg ccgaccggta ataaatattt
      721 cgccgtccac catgtagccg agatcgccag cgttgcgcca ttcacctgcc aataaatcag
      781 ctgttgcgtc aggattgcgg aaataaccgg cgctggcgga agggccatga aattgcacac
      841 gaccttcttg gcgttccggc agttcgtaac cgctcgggcc aataactctt atttgatggc
      901 caggcagggc tttgcccgag gatggcactt ctatcgcgtc acccgagcct tcggccacta
      961 ccgcgcgacc tcttttcatg aatgtttctc gttcgatggt atcgatccgc ggtccacgct
     1021 caagcggtgg aaaagccaag ccaaccgaat tttcagccaa gccgtaaac
//
LOCUS       DASCNL010000113         1501 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000268943, whole genome shotgun sequence.
ACCESSION   DASCNL010000113 DASCNL010000000
VERSION     DASCNL010000113.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000268943"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..938)
                     /locus_tag="QF359_01395"
     CDS             complement(<1..938)
                     /locus_tag="QF359_01395"
                     /inference="COORDINATES: protein motif:HMM:NF014215.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HJO85594.1"
                     /translation="MTEASENRDGMKINWDFPIAMDDGLVLRADIFRPIEDGQYPVIL
                     TYGPYAKGLSFQEGYPSAWDRMVELHLDVTAGSSNLYQAWELADPEKWVPDGYICLRV
                     DSRGCGASPGFVDPFSPRETKDFYDCIGWAGVQPWSNGKVGLNGISYYGINQWHVATL
                     QPPHLAALCIWEGAADWYRDMTHHGGILSTFWDNWYDMQVKTVQYGLGENGPKSAITG
                     NNACGEVTMSEEKLAAQRCDFGAQIFKHSLDDYYHQARSPIWDKVTTPMLSAANWGGQ
                     GLHSRGNFEGYFRAASENKWLEVHGIEHWTEFYTDYG"
     gene            complement(944..>1501)
                     /locus_tag="QF359_01400"
     CDS             complement(944..>1501)
                     /locus_tag="QF359_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HJO85595.1"
                     /translation="SFLKDKMGEQVFSAGMTIYDDPHRARGLRSKPFDSEGVANKKRK
                     IIEDGVLTTWIMDLRSSRQLGLETTGHASRGTGSPPSPSATNVYLESGSGSPAELMSD
                     IKSGLYVTELIGMGINGLTGDYSRGAAGFWIENGELTHPVSEITIAGNLKDMFKNLTA
                     ADDLEYRYGIDAPTLRIDGMTLAGK"
BASE COUNT          347 a          415 c          381 g          358 t
ORIGIN      
        1 ccgtaatccg tatagaactc cgtccaatgc tcaatgccat gaacttccag ccatttattt
       61 tccgacgccg cccggaaata gccctcgaaa ttgccgcgcg agtgtagacc ctgaccaccc
      121 caattggcgg ctgacagcat cggcgtcgtc actttgtccc agatcggcga gcgggcctgg
      181 tggtaatagt cgtcgagcga atgtttaaaa atttgagcac caaaatcaca acgctgggcc
      241 gccagtttct cttcgctcat ggtgacctcg ccgcaggcat tatttccggt gatggcactt
      301 ttgggaccgt tttcgcccaa gccatattgc acggtcttca cctgcatatc ataccaattg
      361 tcccagaacg tcgacaggat gccaccgtga tgagtcatgt cgcgatacca atcagcggcc
      421 ccttcccaga tgcaaagcgc agccaggtgc ggtggctgca gggtcgccac atgccattga
      481 tttatgccgt aatacgatat gccgttgaga ccgactttgc cgttggacca gggctgcaca
      541 cctgcccatc cgatacagtc atagaaatct ttagtttcgc ggggtgaaaa tggatcgacg
      601 aagccgggcg atgcgccaca acccctggaa tcaacgcgca aacagatata cccatccggc
      661 acccattttt ctgggtcggc aagttcccag gcttgataaa gattgcttga gcctgcagta
      721 acatccagat gcagttcaac catacggtcc caggctgagg gatagccttc ctgaaacgac
      781 aggcctttgg cgtaaggtcc gtaggttaat atgacaggat attgaccatc ttcaatgggg
      841 cggaatatat cagcacgcaa aaccagaccg tcatccatcg cgatggggaa gtcccaattg
      901 attttcatgc cgtcacgatt ttcggaggct tcggtcaaat tcattatttc cctgccaggg
      961 tcattccatc aatgcgtaag gtcggcgcat caataccgta gcggtactca agatcatcgg
     1021 cggcggttaa attcttaaac atgtctttga gattaccggc gatggtgatc tcgctcaccg
     1081 gatgggtgag ctcaccattt tcaatccaaa aaccggcggc gccccggcta taatcgccgg
     1141 tgaggccatt gatgcccatg ccgatcaatt cggtgacata aagcccgctt ttgatatcac
     1201 tcataagctc ggccggtgac ccgcttccgg actccagata aacattggtt gccgaaggtg
     1261 agggcggtga gccggtgccg cgcgatgcat gccccgtggt ttccagtccc aattggcgtg
     1321 atgaccgtaa atccataatc catgtggtta aaacaccgtc ctctatgatt ttgcgcttct
     1381 tgttggcaac cccttcgctg tcaaacggtt tggagcggag accccgggcg cgatggggat
     1441 cgtcatagat agtcatgccg gcggaaaata cttgttcgcc cattttatct ttgaggaagc
     1501 t
//
LOCUS       DASCNL010000114         2576 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000272361, whole genome shotgun sequence.
ACCESSION   DASCNL010000114 DASCNL010000000
VERSION     DASCNL010000114.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000272361"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1026
                     /locus_tag="QF359_01405"
     CDS             <1..1026
                     /locus_tag="QF359_01405"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO85596.1"
                     /translation="HLGPRKVEASLLVFCTLGALIFAFSDTLFNLIVGRAFIGFGVSA
                     CLMASFKAFVDWFPKERIALANGAIMTAGGLGALTATAPVEFAVQLTDWRGVFIGLAV
                     LTLLASLAIYFVVPERPPEKKQPGDSTFNDQFQGLLLIIKHPIFLRYVPVSVVSQGSM
                     LAIQSLWVGPWLRDVGGLSRGETANSLLMMAIALACGFLSWGVISERLGHLGISSMKT
                     SLFGMAIFSIMQLILISEPISFMVPALVLFAFFGTAGSLSYAGLVYIFPAHLAGRVYT
                     TVNLLVFIVAFTAQWGIGLIINLWPQPAPGQFSAIGYQVAFATVLSIQLSCFAWIWIA
                     KLIRPQK"
     gene            1114..2412
                     /gene="purB"
                     /locus_tag="QF359_01410"
     CDS             1114..2412
                     /gene="purB"
                     /locus_tag="QF359_01410"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HJO85597.1"
                     /translation="MIPRYSRPEMTAIWEPENKFRIWFEIEAHACDAQAELGIIPKEA
                     AKAVWDRGAFEVDRIDEIERETKHDVIAFLTNLAEHVGDAARFVHQGMTSSDVLDTCL
                     AVQLTQATDILLVDLDRLLTALEKRAFEFKMTPIMGRSHAIHAEPTTFGVKLATFYAE
                     FARNKERLVQARAEIATCAISGAVGTFANIDPGVEEYVAKAMRLQPEPVSTQVIPRDR
                     HAVYFSVLGVIASSVERLATEIRHMQRTEVREAEEFFSEGQKGSSSMPHKRNPVLTEN
                     LTGLARIVRSAVVPALENVALWHERDISHSSVERMIGPDATVTLDFALNRLAGVVENL
                     LVYPEDMQKNIDQLGGLIFSQRVLLALTQAGVSREDSYLFVQRNAMKVWEQGADFLTE
                     LKGDSDVTAKINAGELEELFDIGYHTKNVNVIFKRVFGRS"
BASE COUNT          549 a          631 c          685 g          711 t
ORIGIN      
        1 catttgggac cgcgtaaagt ggaggccagc ctgctcgtat tctgcaccct gggtgctctg
       61 atttttgctt tttccgacac gcttttcaat ttgatagtcg gccgcgcctt tattggcttc
      121 ggtgtgtcgg cttgtctgat ggcgtcattc aaggctttcg ttgattggtt cccgaaagaa
      181 cgcattgcgc tggcaaacgg tgctattatg acggcgggcg gattgggcgc gttaaccgcg
      241 accgcaccgg ttgagtttgc cgtgcagtta actgattggc gtggcgtctt tatcggcttg
      301 gcagttttga cgttgttggc cagtttggca atctatttcg tcgtacccga acggccgccc
      361 gaaaagaaac agcccggtga ttcgaccttc aacgatcagt ttcaaggtct gctgctgatt
      421 atcaaacatc caatattctt acgatatgtt ccggtctccg ttgtctctca agggtcaatg
      481 ctggctatcc aaagcctgtg ggtaggacct tggctacgtg atgtcggcgg attatcgcgc
      541 ggagaaacgg caaatagcct gttgatgatg gcgatcgctt tggcctgtgg ttttttgtct
      601 tggggcgtaa ttagcgaaag gcttgggcat ctcggaattt catcgatgaa aacatcacta
      661 tttggcatgg ctattttttc aatcatgcag ctgatactga taagcgagcc aatttccttt
      721 atggtgccgg cactggtgtt atttgccttt tttggcactg ccgggtcgct ttcctatgct
      781 ggattggtat atattttccc agcccatttg gcaggtcggg tttatactac cgtcaatttg
      841 ctggttttta ttgtcgcttt tacggcccaa tggggtattg gcctgatcat taatctctgg
      901 ccgcaaccgg cgcctggaca attttcagcc atcggttatc aagtcgcgtt tgctacggtt
      961 ttgagtattc agctttcatg ttttgcctgg atttggatcg ccaaactcat acggccgcaa
     1021 aaataaatat tgctgacgtc ttctaaaact gggtggcctc tgatataccg tcaactgcac
     1081 acccattatt ctaacagtta aaagagaact accatgattc cgcgttacag ccgcccggaa
     1141 atgactgcca tttgggagcc ggaaaataaa tttcgtattt ggtttgagat cgaagctcac
     1201 gcttgcgatg cgcaagctga gctcggtatt atccctaaag aagccgccaa agcggtatgg
     1261 gatcgtggtg ccttcgaggt tgaccggatc gatgagatcg agcgcgaaac caagcatgac
     1321 gtcatcgcct ttttgaccaa cttggctgag catgtcggtg atgcggcgcg ctttgtccat
     1381 cagggcatga cttcatcaga cgtgctggat acctgcttgg ctgttcaatt gacccaggcg
     1441 acagatattc tgttggtgga tttggaccgc ctattgacgg cgctcgaaaa gcgcgctttt
     1501 gaatttaaaa tgacgccgat catgggccgc tctcacgcaa tccatgccga accgacgacg
     1561 tttggggtga agctcgcgac cttctatgcc gagtttgccc gcaacaaaga acgcctcgtc
     1621 caagcgcggg ctgagattgc cacctgcgct atttccggcg ccgtcggcac attcgccaat
     1681 attgacccgg gcgttgaaga atatgtcgcc aaagcgatga ggctgcaacc ggaaccggtg
     1741 tcgacacaag tgatcccgcg tgaccgccac gccgtgtatt tttcggtgtt gggtgttatt
     1801 gccagctcag ttgaacggct ggcgacagaa atccgccata tgcagcggac cgaagttcga
     1861 gaagccgaag aatttttttc ggaaggtcag aaaggatcgt cctcgatgcc gcataagcgt
     1921 aatccagtgc tgaccgaaaa cctcactggc cttgcccgca ttgtgcgctc agctgtcgta
     1981 cccgccctgg aaaatgttgc gctgtggcat gagcgcgata tctcgcattc gtcggtcgaa
     2041 cgtatgatcg gtccggacgc aacggtgacg ctcgattttg cccttaaccg gctggctggt
     2101 gtggttgaga acctgctcgt ttatccggaa gatatgcaga aaaatatcga ccagcttggc
     2161 ggtttaattt tttctcagcg ggttctgctg gccctgaccc aagccggtgt cagccgtgaa
     2221 gattcttatc tatttgtgca gcgcaatgcg atgaaagtat gggaacaagg cgctgacttt
     2281 ctgactgagc ttaaaggtga tagtgacgtc acagctaaaa tcaacgccgg cgaactggaa
     2341 gaactgtttg atatcggcta ccatactaaa aatgttaacg tgatcttcaa gcgggtcttc
     2401 ggccggagtt aaatagttaa cattccaaaa ggctaccggc actttttaaa aaattaacct
     2461 tttgccagct cggcttcctc agcttgtgcc gccgttttgc cccacaatgg tgggtctttg
     2521 agatattctt cttcctcacg tgtattttcc cggccgagca cggcgttgcg atgggg
//
LOCUS       DASCNL010000115         1293 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000274195, whole genome shotgun sequence.
ACCESSION   DASCNL010000115 DASCNL010000000
VERSION     DASCNL010000115.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1293)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1293)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000274195"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..979)
                     /locus_tag="QF359_01415"
     CDS             complement(<1..979)
                     /locus_tag="QF359_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85598.1"
                     /translation="MRFPVVLFGLLILLRFAARIYPEFKKRLTEKSFTAQIRTKDGKS
                     GRWFTFGNGKVLSKNGFHADAAVVLSFHNADIGARLLTPPVNWLEQTSAQKNFDLTLE
                     GPDELTFWFVQTLMIAQRASWKFGTDLGGGVIRYTSMTNGGPCFVYVKDDKILRITPI
                     DFDEQDPAPWTIEARGQRLTPPRKTTMSPHGQNWKSMIYSADRLLYPMKRVDFDPKGD
                     RHPENRGKSGYERITWDEAADIVGDEIKRMNTEHGRGAITFNHGSHHSWGNIGYLFSA
                     LVRFANLVGHTKIVHNPDSWEGWFWGAMHHWGNSMRLGLSEGYSTVEDLL"
BASE COUNT          295 a          350 c          336 g          312 t
ORIGIN      
        1 cgagcaagtc ctccacggtg ctgtagcctt cgctaaggcc aagtcgcata gaatttcccc
       61 aatggtgcat ggctccccag aaccacccct cccaactgtc cgggttgtgg acgatcttgg
      121 tgtggccgac taaattggcg aagcggacta gggcgctgaa taaataaccg atgtttcccc
      181 agctatggtg cgaaccatgg ttaaaagtga tcgcgccacg accgtgctcg gtattcatcc
      241 gcttgatctc gtcaccgacg atgtcagccg cctcatccca agtgatccgt tcatatcctg
      301 atttgccccg gttctcagga tgacggtcgc ccttgggatc aaaatcgacc cgcttcattg
      361 gataaagcaa tcgatcagct gagtagatca tagatttcca gttctgcccg tgggggctca
      421 tggtcgtctt gcgtggcggc gtaaggcgct ggcctcttgc ctcgatagtc catggtgcgg
      481 gatcttgctc gtcgaagtcg attggcgtaa tgcgcaggat tttgtcatcc ttaacgtaga
      541 cgaaacaagg cccaccgttg gtcatgctgg tatagcggat aacgccgcct ccgagatcgg
      601 tgccaaactt ccagctagcg cgttgtgcaa tcatcagagt ctgcacaaac caaaaggtta
      661 gctcatccgg gccttccagt gtcaggtcga aatttttttg ggcgctggtt tgctccagcc
      721 agttaaccgg cggcgtaagt agacgggcgc cgatgtcagc attgtgaaag gaaaggacta
      781 cggcggcgtc ggcgtggaaa ccattttttg agaggacttt gccattgccg aatgtaaacc
      841 accggccaga cttgccatct ttggtccgga tctgggcagt gaaggatttt tccgttaaac
      901 gctttttgaa ttctggatat attcgcgcgg caaaacggag tagtatcaac agcccaaaca
      961 aaacgactgg aaatctcatt ccactcactt tttatgggac agctgaattc gtaacgggta
     1021 tgccccaccc ctctctagct ttcgcaatat agcaaaacag cttacgttag accggatgat
     1081 ctcggtgatc atatccactt gtatcaccgc caaggccatt ttggccaccg cctaaagccc
     1141 cattttccgg gaagcaatta ggcgcataat gtcactggtg ccgccgccaa tcacagggaa
     1201 gaacgaatcc cggaggtagc gttgcgcggg atactccatg gtcagcccat agccgccgaa
     1261 gatattgagc gctttctggc agatctcatt gcc
//
LOCUS       DASCNL010000116         2368 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000276399, whole genome shotgun sequence.
ACCESSION   DASCNL010000116 DASCNL010000000
VERSION     DASCNL010000116.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2368)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2368)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2368
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000276399"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>2368
                     /locus_tag="QF359_01420"
     CDS             <1..>2368
                     /locus_tag="QF359_01420"
                     /inference="COORDINATES: protein motif:HMM:NF009589.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HJO85599.1"
                     /translation="QGLEEILVVEERRAFIETHIKELAFNWDASTRPQVIGKSDENGQ
                     PLIPSTGETSSVLLAEIIGRRLLAKTDHPVIKQGLAQVESRKQQAVAVPSKEFRVPHY
                     CPGCPHNRGTSTPEGSLAMAGIGCHSLAMWMPNNDTVTFTHMGAEGVNWIGASAFVDQ
                     KHIFQNLGDGTYVHSGSLAIRAAQAAGCTMTYKILYNDAVAMTGGQSVEGSLSVLDIA
                     RQIAAEGIGKIVVVADDIKKYDEYGPDYKFPRGVELFPRKEMTAVMKACRDYQGVSVL
                     IYDQVCATERRRRRKKGLMPPSTKRVVINERVCEACGDCSIQSNCVAIRTLETPLGTK
                     RQIDQSSCNMDLLCLEGFCPALVTVEGGTLKMPSPSEELNILLDEPSAKTLTKPYDIL
                     IAGVGGSGLITIGNLLGMAAHLEGKECSVLDNTGIARMGGSVSTHVRLGESDAQLNAS
                     RIADVDADVLIGGDPVVSASAEVLTRIRADRTQAVVNTFIAPAAAQAADPELAFDSEN
                     ILANVKSRVDTGQSVFTNVTDLAYGLLGNKVYANIFMLGIAFQKGLIPLEFNSIRQAI
                     ELNDKAVEENISAFNWGRRYALDPDAVTELAGLAEMTPLSLEQKIAVRKDHLTAYQNA
                     AYAKRFTDLITKARAREQEIDGASDSLISAIADNYFKLLAHKDEYEVARLYSDGEFEQ
                     KISDMFGGNVNLHYHIGRKLIVTEERNTDRLKKRTFGPWFMTAFQMLNSLKGLRGTPF
                     DPFGFSTDRQRDRQLVQDYEQTIEKLLADLSPGNLAIAIEIASLPADIR"
BASE COUNT          586 a          562 c          639 g          581 t
ORIGIN      
        1 caaggcttgg aagaaatcct ggtagtcgaa gaacgccgcg catttattga aacgcatatc
       61 aaagagcttg ccttcaattg ggatgcgtct acgcgtccgc aggtgatcgg taaatcagac
      121 gaaaatgggc agccgctcat tccgtccaca ggcgaaactt catcggtcct actggccgaa
      181 ataattggcc ggcgcttatt ggcaaaaacc gaccatcccg tcatcaaaca aggtttggcg
      241 caagtagaaa gccgcaaaca gcaagctgtt gccgtgccaa gtaaagaatt tcgtgtgccg
      301 cattattgcc ccggttgtcc acataaccgc ggcacgtcga cgccggaagg tagtctcgcc
      361 atggctggta tcggctgcca ctccttggcg atgtggatgc ccaataacga caccgtcacc
      421 tttacccata tgggtgccga aggggtcaat tggatcggcg cttcggcctt tgtcgaccaa
      481 aaacatattt ttcagaatct tggcgatggc acctacgttc attcaggcag cctcgccatt
      541 cgcgccgccc aggccgccgg ctgcacaatg acctataaaa ttctttacaa cgatgcggtt
      601 gccatgaccg gcggccagtc ggttgaaggt agcctgagcg tgcttgatat tgcgcgtcaa
      661 attgccgccg aaggtattgg caagatcgtg gtcgtcgccg atgatattaa aaaatatgat
      721 gagtatgggc ccgactataa attcccgcgc ggtgttgagt tgttcccacg taaagaaatg
      781 accgcggtga tgaaagcgtg ccgggactat caaggggttt cagtgttaat ctacgatcaa
      841 gtttgcgcaa cggaacggcg acggcggcgt aaaaaaggtc tgatgccgcc ttcgaccaag
      901 cgcgtggtga tcaatgaacg cgtctgtgag gcctgtggcg attgttcgat ccagtcaaat
      961 tgtgttgcca ttagaaccct ggaaacgccg cttggcacca agcgtcaaat tgatcaatca
     1021 agctgcaata tggatttatt gtgccttgag ggattttgtc cggcgctggt aacggttgag
     1081 ggaggaacat tgaaaatgcc gagcccgtcg gaggagttaa atattttgct cgatgagcca
     1141 tccgctaaaa ctttaaccaa accctatgat attttgatcg ccggtgtcgg tggcagtggg
     1201 ctgattacta ttggcaattt gctcggcatg gcggcgcatc tcgaaggtaa agaatgttcg
     1261 gtattggata ataccggcat cgcccggatg ggtggctcgg tatcgaccca tgtccggttg
     1321 ggcgaaagtg atgcccagct caacgcttcc aggatcgccg acgtcgatgc ggatgtgctg
     1381 atcggcggtg atccggtggt ctcggcgagc gcagaggttc tgacccgaat tcgtgctgac
     1441 cggacccagg cggtggtaaa tacttttatc gcccccgctg ccgcgcaggc tgctgatccc
     1501 gaactggctt ttgatagtga aaatattttg gccaatgtca aaagccgggt agacaccggc
     1561 caatcagttt ttaccaatgt aacggatcta gcttatggcc tgcttggcaa taaggtttac
     1621 gccaacattt ttatgctggg tattgctttt caaaaaggtt taataccact ggaattcaac
     1681 tcaatcaggc aggctattga gctgaacgat aaggcggtcg aggaaaatat ctcagcgttt
     1741 aactgggggc gccgttatgc gctcgatcca gatgcggtta ctgaattggc agggttggct
     1801 gaaatgacac cactttcact ggagcagaaa atcgctgttc gtaaagatca tttgacggcg
     1861 tatcaaaatg ctgcctatgc aaaacgcttt actgatctga ttaccaaagc tcgcgcccgc
     1921 gaacaggaga ttgatggggc gtcggatagt ctgatctccg ccatcgccga caattacttt
     1981 aaattactgg cacataaaga tgagtacgaa gtcgcccggc tgtattcaga cggcgagttt
     2041 gagcaaaaaa tatcggatat gtttggaggt aatgttaatt tgcactacca cattggccgc
     2101 aaattaatcg tgactgagga gcgcaatacc gaccggctca aaaagcgaac ttttgggccg
     2161 tggtttatga ctgcttttca gatgttgaat agtttaaaag gattacgggg cacgccgttt
     2221 gatccatttg gattttccac tgatcgccag cgggatcgcc aattggttca agattatgaa
     2281 caaaccatcg aaaaactttt agctgattta tcgcccggca atttggccat tgcgattgag
     2341 atcgccagtc ttccggcaga catccggg
//
LOCUS       DASCNL010000117         1583 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000278090, whole genome shotgun sequence.
ACCESSION   DASCNL010000117 DASCNL010000000
VERSION     DASCNL010000117.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000278090"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1019)
                     /locus_tag="QF359_01425"
     CDS             complement(<1..1019)
                     /locus_tag="QF359_01425"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO85600.1"
                     /translation="MHEIFIETEDQRAILETVQRFVESEVTPRSAELDANTDPEASYS
                     WEIVEKAHEVGLRQATLSEKYGGMGLDSLTTSMVIEELGKGDLGVSVIFAQTLKIAKI
                     MEAALNEEQRSRVLPIFAKDPRGMLGIGITEPDNASNYFIPHPTPFRTTAEKTDGGWI
                     VNGMKHFISNGNRASFYLVFIQTEKGTPLAEGSTCFLLERDREGFSIGRVHDKMGERL
                     ANNAELVFQDCFLPDENIVGGLNNGFKVLSEFLPQSNAYAASSILGVAGACYEKALNW
                     TKIRVQGGKPLIEHDGIRAQLAEMRMLIDASRSYIHRACYLADNQDQGWDKTLGVLPK
                     TMASQA"
     gene            complement(1169..1384)
                     /locus_tag="QF359_01430"
     CDS             complement(1169..1384)
                     /locus_tag="QF359_01430"
                     /inference="COORDINATES: protein motif:HMM:NF012674.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body protein"
                     /protein_id="HJO85601.1"
                     /translation="MSVSGALSTAVSGLHASAVQFCTTATNIVNSNTPNYEAKEVRSI
                     SQVAGSDQANTGGVTTTIIEGGDINLV"
BASE COUNT          404 a          374 c          381 g          424 t
ORIGIN      
        1 gcttgtgacg ccatggtttt gggcagcacg ccgagcgtct tatcccaacc ttggtcttga
       61 ttgtccgcca gataacaggc tcgatgaatg taagagcgtg aggcatcaat cagcatccgc
      121 atttccgcca attgggcacg gataccgtca tgttcgatca agggtttgcc gccttgcacg
      181 cggattttcg tccaattgag cgctttctca tagcaggcgc cggcgacacc aagaatactg
      241 gaagccgcat aggcgttgct ttggggcaga aattcagaca acactttaaa gccattgttt
      301 aggccaccga cgatgttttc atcaggcagg aaacaatcct gaaagaccaa ttccgcattg
      361 ttggcaaggc gttcgcccat cttgtcgtgc acccggccga tggaaaatcc ttcgcgatcg
      421 cgttccaaca gaaaacaggt gctgccttcg gccagcggag tacctttctc ggtctgaata
      481 aacaccaaat aaaagctcgc ccgattgccg ttcgagataa aatgtttcat accgttgacg
      541 atccagccac catcggtttt ttcagccgtc gtgcggaacg gcgttggatg agggataaaa
      601 tagttcgagg cgttgtccgg ttcggtaatg ccaatgccca gcatcccacg ggggtcttta
      661 gcaaaaattg gcaacacccg gctgcgctgc tcttcattta aggcagcttc cataatttta
      721 gcaattttca gtgtttgcgc gaaaattacc gaaacaccga gatcgccttt gccaagctct
      781 tcgatgacca tcgaggttgt taaagaatcc aatcccatac cgccatattt ttcactcaaa
      841 gtcgcctgac gtaggccaac ttcatgggct ttttcgacga tctcccaaga ataacttgct
      901 tccggatcgg tattggcgtc gagctcagcg gaacgtggcg tgacctcaga ttcaacaaac
      961 cgctgcacag tttcaagaat ggcgcgttga tcttcagttt cgatgaaaat ttcgtgcata
     1021 atttccctcc cgttaatgat cataggatcg ttaaaaagga gtttgattgc aagcaatttg
     1081 gcaaaaaaag aagaggcggg ataaccggta atatcgagca gagagtggcg gtataggata
     1141 ttttagcttg ggttatgtag atgtattctt agacgaggtt gatatcacca ccttcaatta
     1201 ttgtcgtggt aacgccacca gtattggctt gatccgatcc ggctacctga gagatggagc
     1261 ggacttcttt ggcttcatag tttggcgtat tagaattaac gatattagtt gccgtagtgc
     1321 aaaattgaac tgcgctggca tggaggccgc tgactgccgt tgataatgcg cctgaaacac
     1381 tcaattgaat tctctaccac ctgattgata tttttcagta atttaaacga atggccgatt
     1441 aggtgctatg atgagggtca cagtagtttt ttggttattt cggcacaaaa aaacggaacc
     1501 gccacagcga tcccgttcct tggttagcct taaagctagc tacttaataa agattttgcg
     1561 ccgataccat tgagtacatc att
//
LOCUS       DASCNL010000118         1874 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000278740, whole genome shotgun sequence.
ACCESSION   DASCNL010000118 DASCNL010000000
VERSION     DASCNL010000118.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000278740"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(9..338)
                     /locus_tag="QF359_01435"
     CDS             complement(9..338)
                     /locus_tag="QF359_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HJO85602.1"
                     /translation="MSKHSHLGKNVKLSQERMYELIRSPIITEKSTIISEYNQVSFRV
                     PLEATKPEIRAAVEGLFDVKVKAVNTIVQKGKVKRFRGHLGKRSDFKKAIVTLVDGDS
                     IDITTGV"
     gene            complement(335..955)
                     /gene="rplD"
                     /locus_tag="QF359_01440"
     CDS             complement(335..955)
                     /gene="rplD"
                     /locus_tag="QF359_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HJO85603.1"
                     /translation="MKCSVIDISNKKMGDIDLDESVFGAPARPDILSRMVNWQLAKRR
                     SGNHKTKQRAEVKGSTAKPFNQKGTGRARQGDKKSPHMRGGGVAFGPVVRSHVFKMPR
                     KVRQLALRTALSTKQADGKLIVLSEAKSKSAKTGDLAKQVKKLGWENALIIDGAEVDQ
                     NFVLAARNIKGIDVLPQQGANVYDILRRDTLVLTKVAVEKLVERLK"
     gene            complement(1141..1809)
                     /gene="rplC"
                     /locus_tag="QF359_01445"
                     /pseudo
     CDS             complement(1141..1809)
                     /gene="rplC"
                     /locus_tag="QF359_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009868566.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
BASE COUNT          409 a          502 c          437 g          526 t
ORIGIN      
        1 gccatctttt atactcccgt cgtgatatcg atggaatcgc cgtccaccaa tgtcacgatt
       61 gcttttttaa agtcagagcg tttgccgaga tgaccccgga aacgtttcac ttttcccttt
      121 tgcacgattg tattgaccgc tttaacttta acgtcgaaca ggccttcaac ggctgctctg
      181 atctccggct tggttgcttc aagcggcact ctaaagctca cctgattata ctcagagatg
      241 atcgtcgatt tttccgtgat aatcggcgaa cggatgagtt catacatccg ttcctggctc
      301 aatttcacgt ttttgccgag atgactgtgc ttgctcattt gagacgctcc accaatttct
      361 caaccgcaac cttggttaaa accaaagtat cacggcggag aatgtcataa acattggcac
      421 cttgctgcgg cagcacatcg atacctttga tattacgcgc ggccagaacg aagttttggt
      481 caacctctgc accatcgatg attaaagcat tctcccagcc aagcttttta acttgtttag
      541 cgagatcacc ggttttggct gatttggatt tagcttcgct caagacaatt aatttaccgt
      601 cggcctgttt tgtggagagc gccgtgcgca gagcgagctg gcgtactttc cgcggcattt
      661 tgaacacatg tgagcggacg accgggccaa aggcaacgcc accaccgcgc atatgcgggg
      721 attttttatc gccctggcgg gcgcggcctg tacctttttg attaaacggc ttggcggttg
      781 agcctttgac ttcagcccgc tgtttggttt tgtgattgcc agaccgccgc ttggcgagct
      841 gccaattaac catccgcgac aaaatgtcgg gccgagctgg cgcaccgaag acggactcat
      901 cgagatcgat gtcccccatc ttcttgttag atatatctat aaccgaacac ttcattggtc
      961 ttagtcctta ctttccgcat catcatcgga tgcgtctgtg ttttcttcgg cgagagtttc
     1021 ttcttcagcc ggtacttcct ctgcgggagt ttcttcctga gcttctgcta cttcctcgac
     1081 gacttcttct ggagccgcct cctcttgcga ggtttcttct tcagttgaaa ccgcgccacc
     1141 gcgaatacca gctggcattg gggcatcttc cggcagctgt tttttcaaag cgtcgctcaa
     1201 taaaacatag ccgcctttag aacccggcac ggacccttta accaggatta taccgcgatc
     1261 agcgtcggtt aaaacaattt caaggctttg tgtggtcact tgagcattac ccatttgacc
     1321 cgccattttc ttgcctttga agactttacc aggatcctgg cactgacctg tcgagccgag
     1381 ggctcggtga gaaactgaaa cgccgtgaga tgcacgcaga ccagcaaagc catggcgttt
     1441 catgccaccg gcaaagccct taccttgcga ggttccaacc gcatcaacat attggccggc
     1501 gacaaagtga tcggcggtta attcggtacc gacatcaatc aaggagtcat cggaaacacg
     1561 aaattcaact acgtggcttt taggttcgac ttttgacttg gcaaagtggc cacgcatcgg
     1621 ttttgatacg tttttaactt tggcttcgcc aacaccgagt tgaacggctg tgtagccatc
     1681 ttttttctgg gttcgctgag caacaacttg acagttgtcc agcttcagga ccgtaaccgg
     1741 aatgtgttgg ccattttctt tgaaatgggc actcatcccg agtttttgag caataagacc
     1801 ggttctcatg gttccatcca cctagagttt gatctcaaca tcgacaccgg acgcgaggtc
     1861 cagtttcatc aatg
//
LOCUS       DASCNL010000119         2040 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000282722, whole genome shotgun sequence.
ACCESSION   DASCNL010000119 DASCNL010000000
VERSION     DASCNL010000119.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000282722"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            195..1307
                     /locus_tag="QF359_01450"
     CDS             195..1307
                     /locus_tag="QF359_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_263865044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:933..935,aa:Sec)
                     /transl_table=11
                     /product="alkylhydroperoxidase-related (seleno)protein"
                     /protein_id="HJO85604.1"
                     /translation="MSSLPFENCGFEVRQNLIDAHQEAWRRIASPGTWLTGERRLTVV
                     AEIHQAHACDFCQEIKDALSPNAATGTHTATGNLSDAEVELIHRVVSDSGRLSEPWSQ
                     EVLAGGLSEGEYVEIVGIIASVMIIDTCTMALGVADTDLPDAVAGEPTRYLPPGAKVE
                     AAWLPIVEPEDVVETDEPLYPSPKVGYIYRGLSMVPESMRNYWAMANEHYLPGEVIYQ
                     FDKTIRALERPQMELIAARVSALHQCAYUTTAHTYMLRESMQITNNEVNLKDVTRGLS
                     DGTQIPNAEVLVNFAEAIVSRDVAKITAARQIVADTLGNDATVDAAAVASAFHGFVRI
                     ADAIGIPYTTAAQGQDVPEIREAAGINDFYRIQEAS"
     gene            1467..>2040
                     /locus_tag="QF359_01455"
     CDS             1467..>2040
                     /locus_tag="QF359_01455"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO85605.1"
                     /translation="MTIDMHTHYVPQKLADELRQRDVPPFIFTKDNNSGGGSDWFQMP
                     HGPLAFPDSFTDTTARRDFMAGLSINRQVLSFPGLFGLDSIAAAESYPLVQMFNDDVA
                     QLAKDYPDQFSGLAALPMADIDLAVQEYKRARDGLGLIGVILPNNCFVSEDHAQHLAP
                     IFKAAQEIGGHIFIHPGRRPDEVPEIYQPLS"
BASE COUNT          488 a          537 c          528 g          487 t
ORIGIN      
        1 cattaatgct ccccaattct tatatagatc atagcccaca tgattaaagc cgtgataagc
       61 gaattgtgaa gacgctgctt ttcattttag ctcttgcgac ctaatcttaa ctatgaattc
      121 ttaaggctgg tcagcccgtc cttttttctt ttatgctagc cccactaaca atttaatgag
      181 tgaggttgaa attcatgtca tcactaccct ttgaaaattg cggctttgag gtgcgccaga
      241 accttatcga cgctcaccag gaagcgtgga gacgcatagc atctcccggc acctggttaa
      301 ccggtgagcg gcgtctgact gtcgttgccg aaatccacca ggcccacgct tgcgatttct
      361 gccaggaaat taaagacgct ctttcaccca atgcggcaac aggcactcac actgccacgg
      421 gcaatttaag cgacgccgaa gttgaactta ttcaccgcgt cgtctccgat tcaggccgct
      481 tgagcgaacc ctggtcgcag gaagtactgg cgggtggcct aagtgaagga gaatatgtcg
      541 agattgttgg cattattgcc tcggtcatga ttatagacac ttgcacgatg gcgctaggcg
      601 tcgctgatac tgatctacct gatgcggtag ctggagaacc aacccgctat ctgccaccgg
      661 gcgctaaagt cgaggccgcc tggctaccga ttgtcgagcc cgaagatgtc gttgagaccg
      721 atgagccgct ctatcccagc cccaaagtag gctatatcta tcgcggtctg tcgatggtac
      781 cggaatcgat gcggaattac tgggcaatgg ccaacgaaca ttatctgccc ggcgaggtta
      841 tctatcagtt cgataaaacc atccgcgcgc ttgaacggcc gcaaatggag ctcatagcag
      901 ctcgggtctc ggcgctgcat caatgcgcct attgaacaac ggcacacacc tacatgctcc
      961 gtgagagcat gcaaattacc aataacgaag ttaatttaaa agacgtcacc cggggcctta
     1021 gcgacggcac gcaaataccc aatgcggagg tactggtgaa tttcgctgaa gctattgtca
     1081 gccgagatgt tgccaagatt accgcggcgc gccaaattgt tgccgatacg ctggggaatg
     1141 atgccacggt tgatgcggcg gcagtcgctt cggcttttca tggctttgtc cggatcgccg
     1201 atgcgattgg cattccctat accacggcag cccaaggcca ggatgtgccg gaaatccgtg
     1261 aagctgcggg catcaacgac ttctaccgta tccaggaagc cagctaggaa atatattcca
     1321 aggtttcagg tgccggtgtc gcaattagag ggtagttgtt gcgaatccag taccgggtac
     1381 cagagtcgca agcgttcgca attgggagag ataagttaag attgtaataa aggtacctgg
     1441 tacctttatt acaattgaga aaaattatga ccattgatat gcacacccat tatgtgccgc
     1501 aaaagcttgc tgacgaattg cgccagcggg acgtgccgcc gtttattttc accaaagaca
     1561 ataactccgg tgggggctcc gactggtttc agatgccgca tggcccgctc gcttttcccg
     1621 atagttttac cgatacgacg gcgcggcggg actttatggc agggctcagt attaaccggc
     1681 aagtcctctc ctttccaggc ctgttcggcc tcgatagcat tgcggcggcg gaaagttatc
     1741 cgctggttca gatgttcaat gatgatgtgg cacagctggc caaagattac ccggatcaat
     1801 tttccggcct agcagcgttg ccgatggcgg atattgatct cgccgttcaa gaatataaac
     1861 gcgcccggga cgggcttggc ctgatcggtg tgatcctgcc caataattgc tttgtcagcg
     1921 aagaccatgc ccaacacctc gcgccgattt tcaaagcagc gcaggagatt ggcggccata
     1981 tatttattca cccgggccgc cggcccgatg aagtaccaga aatttatcaa cccctatcgc
//
LOCUS       DASCNL010000120         5816 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000288779, whole genome shotgun sequence.
ACCESSION   DASCNL010000120 DASCNL010000000
VERSION     DASCNL010000120.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5816)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5816)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5816
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000288779"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="QF359_01460"
     CDS             complement(<1..454)
                     /locus_tag="QF359_01460"
                     /inference="COORDINATES: protein motif:HMM:NF013847.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85606.1"
                     /translation="MGNAPFRADHVGSLLRPADLLAARDQHAQNEISDADLREIEDNC
                     ILEAVAMQEDLGLTSITDGEFRRASFTHDFINKINGVNFEKNPDYHFGDIAKAKSKCQ
                     LPPFRAVVSERLERPAEGIEVENFSFLKSVVNKTAKICLPSPTMLHFRG"
     gene            complement(476..1921)
                     /locus_tag="QF359_01465"
     CDS             complement(476..1921)
                     /locus_tag="QF359_01465"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO85607.1"
                     /translation="MEWYLALFLMLGTVCLIMFVGLPVAFAFFAANVLGTFFFINGDI
                     GLVFMPMEFNNAINFGLAPIALFLLMGEILLHTGVAFKAIGAIDRMISRVPGRLSIVS
                     IVGGTVFSSLSGSTIANTAILGSVLLPDMIERGYKPSIAMGPIMAVGGIAMLIPPSAL
                     AVLLASIAEQSVAQLLIAGIIPGILMAILFFAYVIGRCILDPTLAPSYTPDESYLDQP
                     IDISINFGNKTVFSAQYDGNNRKRINRILPFFVYILPLFIIFIVVVGSIFFKIAAPTE
                     AAAMGSLAALGACYFFKLFTKFIKITGIDGADFTWRAIWKSLVETAKINTMILFIIAG
                     SLVFSQALSNSGATDGLLNAVAAMKLSQLQIVIIMMIVLLFLGAFMDQVSMLLLTLPF
                     FLMGSQSFQVMFNIDVIWLMVLMLITMEISLLTPPFGLLLYVMKGIAPFDVSIIDVVK
                     SALPFIAIEIAVLALLIAVPEVAIWLPKMVQ"
     gene            complement(1924..2442)
                     /locus_tag="QF359_01470"
     CDS             complement(1924..2442)
                     /locus_tag="QF359_01470"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HJO85608.1"
                     /translation="MDKFETHFIRLTHFFAALVAISIGLFAIFIPFNLFIIKAQIGSI
                     WWLNGSIEYALYFGVFAGAPWVLQQGAHVRVDIVTASLPPSAATKLDTIINLFGAALC
                     ILLCVYGVRAGINEFINETMPDKDLRVANWIVVSFFAFSLAMLTTEFLLRLRNNRVLK
                     IGDDEHASDAGF"
     gene            complement(2554..3537)
                     /gene="dctP"
                     /locus_tag="QF359_01475"
     CDS             complement(2554..3537)
                     /gene="dctP"
                     /locus_tag="QF359_01475"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HJO85609.1"
                     /translation="MKLTSTILATAAASLAVFSISTAPAVSAEVTLKGASCFPIGSPP
                     SRGYESVVKEVNARGKGVLQIKLVGGAPAIGSPFTLTQKMAGGAYDIVGCTEAYFGNV
                     LPEAPVFRLSPKPYSELRQNGGIAYLQKLLHEKNIHFIARHEDHGPFNLWLSKKIDKP
                     DLTGLNLRVAPVYTAFFKKLGATVQTSAMPRIYTLMENNTVQGFGWPAGAFVPPWMKV
                     TKYQVEPGFYWSTLHTLVNLKKWQSLGKAQQDLLNKIGLEAESRHEPGNATLTARLKK
                     GIAKRAKAGMKVIEFKGANRKKWLDAAYTAAWQEVHERSPKHGAALEKLFR"
     gene            complement(3650..4627)
                     /locus_tag="QF359_01480"
     CDS             complement(3650..4627)
                     /locus_tag="QF359_01480"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: protein motif:HMM:NF006125.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HJO85610.1"
                     /translation="MSTAPKIIALGAGRMGRGIAQVFAYAGHDVTILDFKERDAAVSE
                     ALLTAGKAEVKENLEFLASLEVLDAEKIPAILDRIHGANINEAADVLSDADYIFEGVP
                     EVLELKEDAIKRASKLTPDSAVIASTTSTMLVDTLAAFSHRPENFLNAHFLNPAYLIP
                     LVEVSPSDKTDTSKLKAFTELLESIGKTPVQCKASPGYIVPRFQSLIMAEAVRMIEEG
                     IATAEDIDRAVTTGFGVRYATMGPVEFIDWGGVDILHYANKYLSKELGERFRAPAMVD
                     QKIADGHLGMNHGKGFYDFNNMDVEAYKREKLSTFIALLKHLDLMPKAR"
     gene            complement(4624..5712)
                     /locus_tag="QF359_01485"
     CDS             complement(4624..5712)
                     /locus_tag="QF359_01485"
                     /inference="COORDINATES: protein motif:HMM:NF014381.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HJO85611.1"
                     /translation="MEIAVIGGGHGCYAAAVSLTEQGHNIRLWRRDAAAFGAIRDTRT
                     LKLTDHKGTRDIEISVVIDDLAAAIDGAELVLLPLPCHTHRSLAPQLAPLWQEGQVGY
                     LPPGTFGGYIYAKAAVDAGNTANIAFGETGTLPYLARKHGEDNVRISVYATRLPTGIY
                     PLKDAERAFAVIKQAFPAAEQITDLLDGALMNAGPIIHPPLIMMNAGPLEHFDAWDIH
                     NEGTQASIRSVTDALDDERISLREALGYSAPHFPLKDHYDDDREEWMYGNSSHEKLTD
                     STDWREKIDLHTHRYMREDTALGLAFYVSIGRWVNHPMPISEGLLAIATGITGDPLYE
                     SGRSLESLGLADLSLDEMRDMLTNGIAT"
BASE COUNT         1589 a         1362 c         1412 g         1453 t
ORIGIN      
        1 cgcctctgaa gtgcagcatg gtcggcgacg gcaggcaaat tttggcggtc ttgttaacca
       61 ctgatttcaa gaaactgaaa ttctcaactt caatgccttc agcagggcgt tcaaggcgtt
      121 cgctgactac agcgcgaaac ggcggcagct gacatttcga ttttgctttg gcgatatctc
      181 caaagtgata gtccggattt ttctcgaaat ttacgccgtt aattttattg atgaagtcat
      241 gggtaaaact ggcgcggcgg aattcgccat cggtgatgga tgtcaggccg agatcttctt
      301 gcatcgcgac ggcttctaga atgcagttgt cttcgatctc gcgtagatcg gcatcactaa
      361 tttcgttttg agcgtgctga tcccgtgccg ctaagagatc ggcaggtctt agcagactgc
      421 cgacatgatc ggcgcggaaa ggggcgttgc ccatttcttg gagcctttaa ctttgttact
      481 gcaccatttt tggtagccag attgcaacct caggcacagc aatcagtaaa gccagcacgg
      541 caatttcaat ggcgataaag ggcaaggcag acttcacgac atcaatgatc gatacgtcaa
      601 atggcgcgat gcccttcata acatagagca gcagtccgaa gggtggtgtc agcaaactga
      661 tttccatggt gatcagcatc aacaccatca gccagatgac atcgatgttg aacattacct
      721 ggaaggattg cgaacccatc aggaagaagg gtagggtcaa cagcaacata ctcacctgat
      781 ccataaaagc gccaagaaat agcaacacga tcatcattat aatgacgatc tgcaattgag
      841 aaagcttcat cgccgcaaca gcgttgagca agccatcggt tgcaccggaa ttcgaaagcg
      901 cctgactgaa gaccaaggag ccggcgatga taaataatat cattgtgtta atttttgcgg
      961 tttcgacgag tgatttccaa atggcgcgcc aggtaaagtc agccccgtca atgccggtta
     1021 ttttgatgaa tttcgtaaat aatttgaaaa aataacaggc tccgagtgct gctaaactgc
     1081 ccattgcagc agcctcggta ggtgcggcaa ttttaaaaaa tatactgccg acaacgacaa
     1141 taaaaatgat gaataacggc aggatataga cgaaaaatgg caatatgcga tttattcttt
     1201 tgcgattatt gccatcgtat tgtgcagaga atacggtttt gttgccgaaa tttatcgata
     1261 tatcgattgg ttggtccaaa taactttcat ctggcgtgta gctaggcgcc agtgtcggat
     1321 ccaaaataca gcggccaatg acataagcaa aaaacagaat agccattaag atgccaggga
     1381 taatgccggc aatgagcaat tgggcgactg attgttcagc gatactggcg agcaaaaccg
     1441 ccaaagcgga aggcgggatc agcatcgcaa tgccaccaac ggccattatc ggtcccatgg
     1501 cgatggaagg tttgtaacct cgttcaatca tatctgggag tagaactgaa ccgagaattg
     1561 ccgtgttggc aatggtcgaa ccggacagtg atgaaaatac cgtaccgccg acaatcgata
     1621 caatcgaaag tcgaccgggc actctcgata tcatcctatc aatcgcacca atggctttga
     1681 aggcgacccc ggtatgcaac aatatctcac ccatcaacag gaacaatgcg atgggtgcga
     1741 ggccaaaatt aatcgcgttg ttgaactcca tcggcataaa aaccagaccg atgtcaccat
     1801 tgataaaaaa aaacgtaccc aaaacatttg cagcgaaaaa cgcaaaggcg acgggaaggc
     1861 cgacaaacat gatcaggcag acggtgccca gcattaagaa gagtgcgaga taccattcca
     1921 taactaaaat cctgcgtcgg aagcatgttc atcatcgcca attttgagaa cacggttatt
     1981 gcgcagacgc agtaaaaatt ctgttgttaa catggcaagg gaaaaggcaa agaaagaaac
     2041 aacaatccag ttggcaacac gcaagtcttt atcaggcatc gtctcgttta taaactcatt
     2101 aatgccggcc cgtacaccat agacgcataa taaaatacaa agggcggcgc caaaaagatt
     2161 aataatggta tcgagcttgg ttgcggcact cggtggcaaa ctcgcggtca cgatatcaac
     2221 acgtacatgg gcgccttgtt gtagaaccca tggggctccg gcaaaaaccc caaaataaag
     2281 tgcgtattca atggagccat taagccacca tatactgccg atttgggcct tgataatgaa
     2341 cagattgaat ggaatgaaga ttgcgaacag tccaattgag atggccacca gagcggcaaa
     2401 aaaatgggtc aaacgtatga agtgagtttc aaatttatcc aagggtgaat tcatttttaa
     2461 acctaatggg tcaacaattt cattgccaaa ataaaagaag tggaaatgca gtatttttca
     2521 ccacaaatcc acttctttac cgaagaggta gaattaacgg aaaagcttct caagcgccgc
     2581 accatgtttc ggtgagcgtt cgtgcacttc ttgccaggcg gcagtatatg ctgcatccag
     2641 ccattttttc cggttcgcgc ctttgaattc aataactttc ataccagcct tggctcgttt
     2701 agcgatccct ttttttaagc gagcagttag agtagcatta cccggttcgt gccgagattc
     2761 ggcctctagg ccaattttgt tcaaaaggtc ttgttgtgcc ttacctaaag attgccattt
     2821 ttttaagttg accaaagtgt ggagagtcga ccagtaaaaa ccaggttcaa cttggtattt
     2881 ggttactttc atccaaggtg gaacaaatgc tcctgctggc caaccaaatc cctggactgt
     2941 attattctcc atcaacgtat agattcgtgg catggctgag gtttgaactg tggcaccaag
     3001 cttcttaaag aaagcggtgt agaccggtgc gacgcgaagg ttcaagccag tcaaatcagg
     3061 tttatcaatt tttttgctaa gccataagtt aaacggacca tgatcttcgt gtcgggcaat
     3121 aaaatgaatg tttttctcat gcagcagttt ttgtaaatat gcaataccac cattttggcg
     3181 caattcagaa taaggtttgg gtgataaacg aaataccgga gcttccggaa gaacgttacc
     3241 gaaatatgct tccgtacaac caacaatgtc ataggctcct cccgccatct tttgcgtcaa
     3301 cgtgaaggga ctcccgatag cgggggcacc accgacaagt tttatttgta ataccccttt
     3361 accgcgcgca ttgacttctt ttaccacaga ttcatatccg cgacttggtg ggctcccgat
     3421 cggaaagcag ctggcgccct ttaaggtaac ttccgcggaa acggctggtg ccgtcgaaat
     3481 gctaaagacg gcgagtgagg ctgccgcagt agcgagtatt gttgatgtta atttcataat
     3541 aagtctccca gttagaaggt ggttagagtt ggtggtcctg ttcaagttta gtttagttct
     3601 taacgatgct acttatcgca aattttttgg ttcgtatacc agataattat taccttgctt
     3661 ttggcataag gtcgagatgt ttaagtagag caataaaagt tgatagtttt tcccgtttat
     3721 aagcctctac atccatattg ttgaaatcgt aaaagccctt gccatgattc ataccaaggt
     3781 gaccatcagc aattttctgg tcaaccatag ccggtgctct aaagcgttcg ccaagttcct
     3841 ttgataaata tttgttggcg tagtgcaaga tatcgacgcc accccaatcg atgaactcaa
     3901 ccggccccat ggtcgcataa cgcacgccaa aaccagtggt cacggcacgg tcaatatctt
     3961 cggcggtggc aatgccttct tcgatcatgc ggacagcttc ggccataata agtgattgaa
     4021 aacggggtac gatgtagccg ggtgacgctt tgcactgcac aggcgttttg ccgattgatt
     4081 caagcagctc agtgaaagct ttaagcttcg atgtatccgt tttatcgctc gggctcactt
     4141 cgaccagtgg aatcagataa gccggattga gaaaatgcgc attcaaaaag ttttccggac
     4201 ggtggctgaa cgctgccaaa gtatcgacca gcatggttga ggtggttgat gcaatgacag
     4261 ctgaatctgg tgttagtttg ctggcacgtt taatggcatc ttcttttagc tccagcactt
     4321 ccggcacacc ttcaaagatg taatcagcat cactcaatac atcagcagct tcattgatgt
     4381 ttgcgccatg gatacgatcc aggattgctg gaattttttc tgcatccaat acttccagag
     4441 aagccagaaa ttcgagattt tctttaacct ctgctttgcc ggcagtgagc aaggcttcgc
     4501 taacagcagc atcacgttct ttaaaatcga ggatggtcac atcatgaccg gcataagcga
     4561 agacttgggc gatcccgcgt cccatacgcc cagcgccgag agcaataatt ttgggcgctg
     4621 tactcatgta gcaatgccgt tcgtcaacat atcacgcatt tcatccagac tcagatcagc
     4681 gaggccgagg ctttcgagag accggccgga ctcataaagc ggatcaccgg tgatgcctgt
     4741 ggcaatcgcc agcaaacctt cagagatcgg cattggatga ttaacccacc gcccgatcga
     4801 gacataaaag gcgagaccca aggccgtatc ttcccgcata taacgatggg tgtgcagatc
     4861 aattttctct cgccaatcgg tgctgtcggt gagcttttcg tgtgaggaat tgccatacat
     4921 ccattcttcc cggtcatcat catagtgatc ttttaagggg aaatgcggcg cgctatagcc
     4981 gagagcttcg cgcagggaaa tacgttcgtc atcgagcgca tcggtgacgc tgcggatcga
     5041 ggcctgcgtg ccttcattat ggatatccca ggcgtcaaaa tgctccagag gaccggcgtt
     5101 catcataatc aagggcgggt ggatgatcgg tccggcattc atcagtgccc catcgagcaa
     5161 atcggtaatt tgttcggcgg ctggaaaggc ttgtttgatc acggcaaaag cgcgctcggc
     5221 atctttcaaa gggtaaatgc cggtcggcaa acgggtcgca tagacgctga tacgaacatt
     5281 atcctcgcca tgcttacggg cgaggtaggg caaagtgccg gtttcaccaa aggcgatatt
     5341 tgcagtattg ccggcgtcca ctgccgcttt ggcataaata tagccgccaa aagttcctgg
     5401 tggcaggtag ccaacctgac cctcttgcca taacggcgct aattgcggcg ccagcgatct
     5461 gtgggtgtga cagggtaaag gcaataacac caactcggcg ccatcaatag cggcagccag
     5521 atcatcgatg acaacgctga tctcgatatc gcgggtgcct ttgtggtcgg ttaatttgag
     5581 ggttctggtg tcacggatag cgccaaatgc cgccgcatcg cgccgccaaa gtctgatgtt
     5641 atgcccttgc tcggtgaggc ttacggcggc ggcgtaacag ccatgcccgc cgccaataac
     5701 ggcaatttcc aatttccgct ccctggcctt gtgatttagt ttaagcctaa actaataatg
     5761 cctagagtca attgtcatca ggtaattttt acatggctca agtttcgggc tataag
//
LOCUS       DASCNL010000121         1344 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000291188, whole genome shotgun sequence.
ACCESSION   DASCNL010000121 DASCNL010000000
VERSION     DASCNL010000121.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000291188"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..816)
                     /locus_tag="QF359_01490"
     CDS             complement(<1..816)
                     /locus_tag="QF359_01490"
                     /inference="COORDINATES: protein motif:HMM:NF013530.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HJO85612.1"
                     /translation="MVKRIVTVFGGSGFVGRHLVRHLTADGATVRVAVRDPEDARYLK
                     IMGEVGQIVPFAADIRNETTLAAAVDGAESVVNLVGILSEWRAQNFANVHTQGAANVA
                     KAAAAADVARLVQISAIGANEKSGARYAQTKAAGEAAIYAEFPNATIIRPSVIFGPED
                     HFFNFFAGLARFTWVMPVFGCPVIPILKWFTDDAILNIDFYGDGGTKFQPVYVDDVAA
                     AIVSALAAEDAPGKTYELGGPSVYSSVDIMRMLTKIIGRKRLLVPIPFWYLAIW"
     gene            1021..1107
                     /locus_tag="QF359_01495"
     tRNA            1021..1107
                     /locus_tag="QF359_01495"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1055..1057,aa:Leu,seq:cag)
BASE COUNT          369 a          357 c          291 g          327 t
ORIGIN      
        1 ccaaatcgct aaataccaaa acgggatcgg caccaacagg cgcttacggc caattatttt
       61 cgtcagcatt ctcataatat cgacgctgct atagacgctg ggtccgccga gctcgtaggt
      121 tttgccgggg gcatcttccg ccgccaaagc actaacaatg gctgcagcaa catcgtcaac
      181 atagaccggc tgaaatttag tgccgccgtc gccataaaaa tcgatattca gtatggcatc
      241 atcggtaaac catttgagaa tcggtatgac cgggcagcca aagaccggca taacccaggt
      301 aaaccgggcc agcccggcaa agaaattaaa gaaatgatct tccgggccga aaattacact
      361 gggacggata atagtggcgt tgggaaattc agcatagatt gccgcttcgc cggcagcttt
      421 ggtttgcgca taacgggctc ctgatttttc attagcgcca atcgccgaga tttgcaccaa
      481 gcgagcaaca tcagccgccg ctgccgcctt ggcgacattc gcagcacctt gagtatgcac
      541 attggcaaaa ttctgcgccc tccattcgga aagaatacca accagattga ccacgctttc
      601 ggcgccatcg actgctgctg ctaaagtggt ttcattccgg atatccgcgg caaaaggcac
      661 aatttgacca acctcaccca tgatttttag ataccgagca tcttctggat cacgcacggc
      721 tactctgacc gtggccccgt cagctgtgag gtggcggacc aaatggcggc caacaaaccc
      781 ggaaccgcca aaaactgtta caatgcgctt taccatatta atcctgttca gtttgaactg
      841 ctctacagaa cgttatttct ttcctaatta atacatttcc aagtcttccg gaacaaccta
      901 aaccggcaga aattttacct ctctgccgcc aatgtcggga taccatattg acagtgccgg
      961 cgcagaaggg tacgacctcc cctcgttaaa acgccaccgc attaatttgt atagatattt
     1021 gcccaggtgg cggaattggt agacgcgctg gcttcaggtg ccagtggccg caaggtcgtg
     1081 gaagttcgag tcttctcctg ggcaccaagt atttatacgg cttaatcagt gacttaacag
     1141 atttgtcgct atcttatcta atttgttggt cagacgttat tcaactgtaa tcacaatcta
     1201 atcacagtta ggataaatta tggctaccta tagcaaacgt aatcacaaat ggtgtgtgca
     1261 agtaagaaag tctaatcatc ccaatatatc caaataatct ccagaaccat caaacttaac
     1321 agcacttcct ccaaacttac tttc
//
LOCUS       DASCNL010000122         2294 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000291937, whole genome shotgun sequence.
ACCESSION   DASCNL010000122 DASCNL010000000
VERSION     DASCNL010000122.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000291937"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(78..1964)
                     /locus_tag="QF359_01500"
     CDS             complement(78..1964)
                     /locus_tag="QF359_01500"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HJO85613.1"
                     /translation="MIKASDTIVWVLSFCIALVAVYTAAFGIIDEIYQRSITVGVSLI
                     IAIFGSSLAKLYQTENKQTKFGQWGIDFVLIFLVVLSIVWFSSVYDELESGLYSFLPD
                     DLVVGCGGLLVVLEMTRRCYGWPLAFFAFLTIIYALFGADLPWIFAHGGYDLESVLRT
                     VWYSFDGVFGFIVIIVLSLIFIFIIFGAMLEATGAGSTLLKIAISLTGPLRGGPAHAA
                     IAASGFFGTISGAVTANVVGTGVFTIPMIKARGFRNSFAGGVEAAASSGGQFMPPVMG
                     AVAFVMADFTGIAYVIIIAAALMPALFYYGGLFIAVWVEAARLGITSIPKEEREVLTR
                     EDWIKSLMFFVPVIVIIGVLVTGRSPASAGLWATVAGVVMGFINPIVRKRPQIFIDAL
                     AKGGEQCARIMVAVAAIGIIVGVMNLTGLGIRFSNMVLAFAGTNLFFALVLMALASLV
                     LGMGLPTIPAYVIIVIIMGGAIEKLGVPKMLVHLFVVYFGVLSAITPPVAIAAYAAAP
                     IAKANPMNTAMQALKLSSVGFMIPFVLIYNPSLSLVYNFEVIAFVSVVIRLALAIWLV
                     TTALGGVDRAPLPVYSRILRITLGVVILLTYIEVQIAGFIASLILLYVDAKRAKSTIP
                     STPT"
     gene            complement(2092..>2294)
                     /locus_tag="QF359_01505"
     CDS             complement(2092..>2294)
                     /locus_tag="QF359_01505"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HJO85614.1"
                     /translation="TKGSGRYTGGLWDGKFIKSHTYQRISEEASVEVGKYCSRLCALE
                     GFSGRKEQADIRLRRYAGINEG"
BASE COUNT          777 a          577 c          436 g          504 t
ORIGIN      
        1 tttctaatca gtgtgatacg gatgattaaa ttttaaatag caagttgaat taaacataaa
       61 tagtacttta aaacaaatca agttggcgtg ctaggtattg ttgactttgc ccgcttggcg
      121 tccacataaa gcagaataag cgaggcaata aaaccagcta tctgaacctc aatataagtg
      181 agcaaaatta caactccaag cgttatacgt aaaatcctag aataaaccgg cagaggtgcg
      241 cggtctacac cacccaatgc cgtcgtcacc aaccaaatcg ccaaggcaag cctgatcaca
      301 accgatacaa aagcgataac ctcaaagtta taaaccagtg ataaagaagg gttataaatc
      361 aagacgaagg gaatcataaa tccaacggag gagagcttga gtgcctgcat cgctgtattc
      421 ataggatttg ccttcgcaat tggggccgcc gcgtaggcgg cgatagcaac aggcggcgta
      481 atggccgaca atacaccaaa atagaccaca aagagatgga ctagcatttt tggaacacct
      541 agtttttcaa tcgctccccc cataataatt acgataatca cataggccgg tattgtcgga
      601 agccccatac ccagcacgag actggcaaga gccatcaata ccaaagcaaa aaataaatta
      661 gtaccggcaa aggctagaac catgttagaa aaacgtatac cgagacccgt cagattcata
      721 acacccacga taattcctat agccgcgaca gccaccataa tacgtgcaca ttgttcacca
      781 cccttggcca acgcatcaat aaatatctgg ggtcttttgc gaacaatagg attgataaat
      841 cccatgacga cgcccgccac ggttgcccaa aggccagctg atgccggcga gcgaccggta
      901 acaagaacgc caatgataac aattacagga acaaaaaaca taagagattt gatccaatcc
      961 tcccgtgtca aaacctctcg ctcttctttt ggtatcgaag taattcccag tcgcgccgcc
     1021 tcaacccaaa ccgcaataaa taagcctcca taatagaata aagccggcat caaggcggcc
     1081 gctatgataa tgacataggc aatacccgta aaatcagcca tgacaaaagc gactgcgccc
     1141 ataactggtg gcatgaattg tcctcctgaa gaggctgccg cttcgacccc gccagcaaag
     1201 gaattcctaa aaccgcgtgc tttaatcatt ggtatggtaa aaacacccgt cccgaccaca
     1261 tttgctgtga ccgcaccgga gatcgtgcca aaaaatccac tagccgcgat tgcagcatga
     1321 gccggccctc ctctcaatgg gcccgtaagg ctaatggcta tttttaagag ggtactacct
     1381 gctccagtcg cttccagcat tgcaccaaag atgatgaata taaaaataag tgataaaaca
     1441 atgataacaa taaagccaaa aacaccatcg aagctgtacc aaactgtccg cagcaccgat
     1501 tcaagatcat aacctccatg agcaaaaatc cagggaagat cggctccaaa taaagcataa
     1561 atgatcgtaa gaaaggcaaa aaatgctagg ggccaaccat aacagcgccg tgtcatctca
     1621 agaacgacaa gcaacccccc acatccaaca acaaggtcat caggcaaaaa actataaagc
     1681 ccactctcaa gttcatcata aacggaggaa aaccaaacga tcgataaaac aaccaagaaa
     1741 atgagaacaa aatcgatacc ccattgtcca aattttgttt gtttattttc ggtttgatac
     1801 aattttgcca gtgaagatcc aaaaatagcg attatgagtg ataccccaac cgtaatactg
     1861 cgctgataga tttcatcgat gatgccgaac gcggcggtat agactgcaac caaagcaata
     1921 cagaaactca aaacccaaac aattgtatca ctagctttaa tcatacccac gcgtttcctg
     1981 tatcttgatt tatattataa ttttagtacg gcttataagc cgctcgtaac ctagttaatt
     2041 catcgggaaa tgaaagttaa tttaacgttt gcgagtaaaa taattcagat gctaaccctc
     2101 atttatcccg gcatatcggc gtagtctaat atcagcctgt tctttacgcc ccgaaaaacc
     2161 ctccaaagcg caaagccgtg aacaatattt accaacctca accgaagctt cttcagaaat
     2221 tctctgatag gtgtgcgatt taatgaattt tccgtcccaa aggccccccg tatagcgccc
     2281 agatcctttt gtcc
//
LOCUS       DASCNL010000123         2878 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000295330, whole genome shotgun sequence.
ACCESSION   DASCNL010000123 DASCNL010000000
VERSION     DASCNL010000123.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000295330"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="QF359_01510"
     CDS             <1..844
                     /locus_tag="QF359_01510"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO85615.1"
                     /translation="PPSAALIIYGILTEEGIAELFAAGIIPGIISVILYILVIMLVTH
                     FKPEMGPRGERTGWKIRFQKLYRVWGIVLLFFLILGGISFGVFTPNEAGGIGAIGSLL
                     FAMLRKKMSWPVLFDSLVEAAQTTAMVFMIAIGALILNNFIALAGISSGVINWIESLH
                     LEAFAVLLVILAFYVALGTVVEGLAMIFLTVPIFVPVIESLGFDLIWFGIVLVMMTEI
                     SLITPPIGLNVFVMKSMMPDVPLNAIFRGIVPFFCADIVRLSIVVAFPSVALWLPKLV
                     YGTF"
     gene            complement(848..1546)
                     /locus_tag="QF359_01515"
     CDS             complement(848..1546)
                     /locus_tag="QF359_01515"
                     /inference="COORDINATES: protein motif:HMM:NF025217.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HJO85616.1"
                     /translation="MTDDWEQQIKAQIRQRYVVQAGDATEGTARTIEHGYPAELINEL
                     PPVLVAAYSGCGYLFAGLEFKGNETVVDLGAGAGLDSWIVASHLTNGTVYSVDMTFEM
                     LEKVNSQQLTINLLPICADIENVPLANCCADLVIANASFNLAISKEHAFAEAHRILKP
                     GGRLVARDLIKEGELPPEILTDPLSYNTSLGGALEEHELATEMAKAGFKNIAVSDHWE
                     FSYVQSVKIEASAR"
     gene            complement(1615..2391)
                     /locus_tag="QF359_01520"
     CDS             complement(1615..2391)
                     /locus_tag="QF359_01520"
                     /inference="COORDINATES: protein motif:HMM:NF024258.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HJO85617.1"
                     /translation="MSFKFCLYSDIHGQIALLDAVEERVAAENPDKVIVIGDLVGLGP
                     NPEVIVQRMMDRPEIDIVVGNVDLWVTRKVWETTKPKSPHQEWMFRMMEQTRERLNDE
                     QLEWLDKRPFSMTYTPEMGHDLHVFHGTPYDIGDSDAFPFRLSDDEISEKLIDYNYDV
                     MAHGHIHGPSVRNIKNGDKVNQLVCAAAVGMSWDGDPRPSYAVVEYMGDGKWDCRVER
                     AEADNEAQAKLNEESWIEHGERIAGMIRTGTFWNPDHMPH"
BASE COUNT          656 a          718 c          699 g          805 t
ORIGIN      
        1 cccgcccagc gcggcactga tcatctatgg catcctgact gaggaaggta ttgctgaact
       61 gttcgccgcc ggcatcattc ccggtatcat ctccgtgatc ctctatatat tggttattat
      121 gctcgttact cacttcaagc ccgaaatggg cccgagaggt gagcgtaccg gctggaagat
      181 acggtttcaa aaactttacc gggtgtgggg tatcgtcttg ctgtttttcc ttattctcgg
      241 tggtatttcc tttggtgtct tcacgcccaa tgaggctggc ggcatcggcg ctatcggctc
      301 gttgctgttc gccatgttgc gcaaaaaaat gtcctggcct gttttatttg attccctggt
      361 cgaagcggct cagaccactg cgatggtctt catgattgcc atcggcgccc tcattctcaa
      421 caatttcatt gcccttgccg gtatttcctc tggcgttatc aattggatcg aatcgcttca
      481 tttggaagca tttgctgttc tattggtcat tctagctttt tatgttgccc tcggaacagt
      541 ggtggaaggt ttggcaatga ttttcctgac ggtgccaatc ttcgtgccgg tgattgaatc
      601 cttagggttc gacctgatct ggttcggtat cgttctggtg atgatgaccg agattagctt
      661 gattacgccg ccgattgggc tcaacgtctt tgtcatgaag tcgatgatgc cggacgtgcc
      721 tttgaacgcg atattcagag gtatcgtccc gtttttttgc gccgatatcg tccgcctgtc
      781 gattgtcgtt gcctttccgt cggtggcgtt gtggttacct aaattggtct acgggacttt
      841 ctgacgctta acgggcagat gcttcaattt tcactgattg aacataggaa aattcccagt
      901 ggtcggagac ggcgatattt ttaaatccgg cttttgccat ttcggtggcc aattcatgtt
      961 cttcaagtgc accacctaac gatgtattgt atgacagtgg gtcagtgaga atctccggcg
     1021 gcagttcgcc ctctttgatc aaatcccgcg ccaccagccg cccaccgggt ttgagaatgc
     1081 gatgtgcttc ggcgaaggcg tgctccttac tgattgccaa attaaacgac gcattggcga
     1141 tcaccagatc ggcgcagcaa ttagcgagtg gcacattttc gatatcggca caaatgggca
     1201 aaaggttaat tgtcaactgt tgagaattaa ccttttcaag catctcaaat gtcatatcga
     1261 ccgaatatac ggttccattg gtaaggtgcg aggcgacgat ccagctatcc agtccggcgc
     1321 ccgcacctaa atcaaccacg gtttcgttgc ccttaaattc gagacctgca aagagataac
     1381 cgcagcccga ataagccgcg accaggacag ggggaagttc attgatcagt tctgccggat
     1441 agccatgttc aatagttctc gccgtgcctt cggttgcatc gccagcctgg actacatagc
     1501 gctggcggat ctgcgctttg atctgctgtt cccaatcatc cgtcatggac ccaagataaa
     1561 gaaataaggg cgtgctacaa gagcgcgccc ttcaaattca ttatgcacca aaaattagtg
     1621 cggcatatga tccgggttcc agaaggtgcc cgtgcggatc atgccggcga tgcgttcacc
     1681 atgttcaatc cagctttctt cgttgagctt cgcttgtgct tcattgtcgg cttcagcgcg
     1741 ctcaacccgg caatcccatt taccatcacc catatattca acgacggcgt acgaaggacg
     1801 cggatcgcca tcccagctca tgccaacagc agcagcgcaa accagttggt tgactttgtc
     1861 accatttttg atgttgcgga cggaggggcc atgaatgtga ccgtgcgcca tcacatcgta
     1921 attgtaatca ataagttttt cggagatttc atcatcggag aggcgaaacg ggaaggcatc
     1981 tgaatcacca atgtcatacg gtgtgccgtg gaagacatgt aaatcgtgac ccatttccgg
     2041 cgtatacgtc attgagaacg gacgcttgtc gagccactca agttgttcgt cattcaggcg
     2101 ctcgcgggtt tgctccatca tccggaacat ccattcttgg tgcgggcttt taggcttggt
     2161 agtttcccaa actttgcggg tgacccaaag gtcaacattg ccgacaacga tatcgatttc
     2221 cggacggtcc atcatccgct ggacgatcac ttccggattt gggccgagac caaccagatc
     2281 gccgatgacg atcactttgt ctggattttc agccgcaaca cgttcttcca cggcgtcgag
     2341 cagagcaatc tgaccgtgaa tatctgaata gagacaaaac ttaaagctca tgattttttt
     2401 cctttcttaa ggccttttgg cctttcaccc caatacttat tcgtatgcgg ctctcatttg
     2461 tttcccccag taaaaccatc aaattaccac acctgactaa agccataatt tgattttaat
     2521 tcttactgtt gatgttgatg atcttctata tcaaatctgg cttaggggct gcaaacttaa
     2581 ttgtcgattg atgccaaaaa attgagttaa agccacaata aatttgtcag ttattttttg
     2641 gagattttag tgaaaaggtt gcgcgatagt ttctcaggat gtaattagcc ggtgtatact
     2701 tatcgccaaa aagaaatggg ggccaccaca tgaataccgc acctgaaaaa gacgaaattg
     2761 acttagccgc ccaggaaacg gtccgtgaag cgcggacgcg cacgggtcct ttggacgtca
     2821 atgcactgga tatgatgttt cgcgccaacc gttcgtttaa tggctggaaa gacgatcc
//
LOCUS       DASCNL010000124         1571 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000295855, whole genome shotgun sequence.
ACCESSION   DASCNL010000124 DASCNL010000000
VERSION     DASCNL010000124.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000295855"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            43..1440
                     /gene="hemG"
                     /locus_tag="QF359_01525"
     CDS             43..1440
                     /gene="hemG"
                     /locus_tag="QF359_01525"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HJO85618.1"
                     /translation="MTVDVAIIGGGISGLATAYNLAGKGLDVVVLERQVHAGGNAISE
                     RIGEFLMEHGPSTVNAQSIDANDIAKRLELTAEQCALGAGVKNRYLVGKGALKGIPVH
                     PLGFLWSNYLSLKGRLRLMTEFAVPRNKNKAEETIAEFAGRRFGKEFAAKVIDPLVAG
                     IYAGRAGELSVKAGFPKLYGLEQKYGSISLGLVQHHRQGAKNMPSSRLFSFKDGIGFL
                     PKALADALGERVKTGVTVRRIKKTLHGFSIDTEDKSKLRARAIVVATQPHVAAELLED
                     VDVYSSHTASEIEAPPLAVVYFGFKRKDVEHPLDGLGFLAPESEKLSMSGSQFCSTMF
                     PGRAPQDCVSMAGYFGGARAPELAQLPAADLTEIARREFKDLVGAKGEPVVSRVRHWP
                     RGLPQYKIGHTDRVQTMLKANQRVPGLFLTGNYICGPSVAVCVDQAGKTAVNVANHLD
                     AHVPSDMEQTQKAAM"
BASE COUNT          366 a          382 c          443 g          380 t
ORIGIN      
        1 cgtttaagcc aaacctcaaa ggtaagacgg aggctgggcg cgatgacagt tgatgtagcc
       61 attatcggcg gcggtatttc cggtctggcg acggcttata atctggccgg gaaagggttg
      121 gacgtcgttg tgcttgagcg tcaagtgcac gccggtggca acgctatttc cgaacgtatc
      181 ggtgaatttt tgatggagca tgggccaagt acggtcaatg ctcaatctat tgacgccaac
      241 gatattgcca agcggttaga gctgacagcg gagcaatgtg ctctcggggc tggggtcaaa
      301 aaccgctatc tggtcggcaa gggtgcgctc aaaggaattc cggttcatcc gctgggcttt
      361 ttgtggtcga actatttgag cctcaaaggc cgcctacgcc taatgacgga gttcgccgtt
      421 cctcgtaata aaaataaggc ggaagaaacc attgccgaat ttgccggccg ccgctttggt
      481 aaagagtttg cggcaaaggt gatcgaccca ttggttgctg gtatttatgc tggccgcgcc
      541 ggcgagttgt cggtcaaagc aggttttcca aaactttacg gtctcgagca aaaatacggc
      601 tcgatctctt tgggtttggt ccaacatcat cgccagggtg ccaaaaacat gccgtcaagc
      661 cgcctgtttt cctttaaaga cggtatcggg tttttgccga aagcgctggc ggatgcgctc
      721 ggtgagcgcg ttaaaacggg cgttaccgtg aggcggatta aaaaaacttt acacggtttc
      781 agcattgata ccgaggataa aagtaagctc agggcgcgcg ctattgtggt tgcgacccaa
      841 ccccatgttg ccgctgaatt gttggaagat gttgacgtct attcgtccca tactgccagc
      901 gagatcgagg cgccgccctt ggcggtggtt tatttcgggt ttaaaagaaa agatgtcgag
      961 catccgttgg acggtcttgg cttcttagcg cctgaaagtg agaaactatc aatgtcgggc
     1021 tcacagttct gctcgactat gttcccgggc cgggcaccgc aagactgtgt ttcaatggcg
     1081 ggttactttg gtggcgcccg cgcgcctgaa ctagcgcaat tgccagccgc tgacttaacc
     1141 gaaattgccc gccgggaatt taaagacctc gttggtgcta agggtgagcc ggtggtttcc
     1201 cgcgtgcgtc attggccacg cggcttgccg cagtacaaaa tcggtcacac tgaccgggtc
     1261 caaacgatgc ttaaagccaa tcagcgggta cccgggctgt tcttaaccgg taattatatc
     1321 tgtggtccat cggttgcggt ctgcgtcgat caagctggta aaacggcggt taatgttgca
     1381 aatcatctcg acgctcacgt gccatcggat atggaacaaa cacaaaaagc agctatgtaa
     1441 tgagacgatt aaccgtcctt cttacatttc taaccgcaat tatcatgaat ctcggcgtcg
     1501 aggcacacgg cccaaatcaa aaaaacaagg aaactgcttc aattaccagt aaccggggtc
     1561 cgtttgagct g
//
LOCUS       DASCNL010000125         2565 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000297941, whole genome shotgun sequence.
ACCESSION   DASCNL010000125 DASCNL010000000
VERSION     DASCNL010000125.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000297941"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1011
                     /locus_tag="QF359_01530"
     CDS             <1..1011
                     /locus_tag="QF359_01530"
                     /inference="COORDINATES: protein motif:HMM:NF021010.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ethylbenzene dehydrogenase-related protein"
                     /protein_id="HJO85619.1"
                     /translation="RNVTLPWKIKGGSNVEDIYMRFSTGINGTPMPSFAKALSNEDRW
                     ALANFIKSLQHQLTSHQVLKAKKVEGEVPVKPDDTAWQTAEAMDMRLAGQVVAAPRWQ
                     NPSIELVTVKAAFNNKEIAFLMEWDDPFKDAIHKMDKVFKAKDINKVGAFNSYVAAND
                     MIPRALETYRDSVALQFPAKFKPGTKKPHFLRGNSSNPVNLWVWKADLAEKAKSGAEE
                     ATARGYQQPARAQAKDQQQVTATSEWKDGRWRVVMKRRLVTEDSNDIQFSTGKFIPMS
                     LNAWDGSNGEHGLIMSLSTWHFVFLEAPTPMVIYVYAMLAFLITGGLGIWLMKKALAK
                     TA"
     gene            1047..1709
                     /locus_tag="QF359_01535"
     CDS             1047..1709
                     /locus_tag="QF359_01535"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HJO85620.1"
                     /translation="MRFILTTFAAIGLLGFVVGTAHADAGAGKAAFAAKKCTGCHYTD
                     GPAKERSIAEQLAKKGPELWYAGSKFQAAWLKGWLQDPKPIRHLAYNSLTKKNAGDHP
                     KLSAGDAANVADFLMSKTTSEVKAGVIKPKKNLKGKKIFTKKMPCTGCHQSASKKGKV
                     TGGFSGPTLVGVGKRLNPDWIYAYLKNPTHFKPFKAMPTFAGILKDKDLKKVAKHVSN
                     LK"
     gene            1725..2102
                     /locus_tag="QF359_01540"
     CDS             1725..2102
                     /locus_tag="QF359_01540"
                     /inference="COORDINATES: protein motif:HMM:NF024834.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJO85621.1"
                     /translation="MKKLIKISLLAAVFGLAWLINGQTATAAGAEETFKFYCAQCHGL
                     EGKGKGPNVTKDFPVTPRDFTNAKEMSKLSDNYIRGIIMDGGPSQSKSPLMPPWSKTI
                     LDVDVNGLIKHLRGLCKCKGKAG"
BASE COUNT          738 a          599 c          626 g          602 t
ORIGIN      
        1 cgtaacgtca ccctgccgtg gaaaatcaaa ggtggcagta acgttgaaga catctatatg
       61 cgcttttcga ctggcatcaa cggcacaccg atgccatcct ttgctaaggc actctccaat
      121 gaagaccgct gggcgttggc taattttatt aaatccttac agcaccagct gaccagccat
      181 caggtgctca aagccaaaaa agtcgagggt gaggtgccgg tgaaaccgga cgacacagcc
      241 tggcagacgg ccgaggcgat ggatatgcgt ttggccggcc aagttgtcgc cgctccgcgc
      301 tggcaaaatc ctagtattga attggtgacc gtcaaagctg ccttcaataa taaggaaatc
      361 gctttcctga tggaatggga tgatccattt aaagatgcca tccacaaaat ggataaggtc
      421 tttaaagcta aagacatcaa caaagtcggc gcctttaatt cttatgtcgc cgccaatgac
      481 atgatccccc gcgcgcttga aacctaccgt gattctgtgg cgttgcaatt cccagccaag
      541 tttaagcccg gcactaagaa accgcatttc ctgcgaggca attcttctaa cccggttaac
      601 ctctgggtat ggaaagctga tctggcggaa aaagccaagt cgggcgcgga agaggcaact
      661 gcgcgcggtt accagcagcc ggccagggcg caagccaaag accagcaaca ggtgacggcg
      721 acgtcagaat ggaaagacgg ccgttggcgc gttgttatga aacgccggct ggtcactgaa
      781 gacagcaacg atattcaatt tagcaccggt aagttcattc ccatgtcgct taatgcctgg
      841 gacggttcga acggtgagca tggcctgata atgagcttgt caacttggca cttcgtcttc
      901 ctcgaagcac caacgcccat ggtcatttat gtctatgcaa tgttggcctt cctgatcacg
      961 ggtggattag gtatttggct gatgaaaaaa gcgctggcaa aaactgcata atcgagcaac
     1021 taagccagca aaaaaggagt aggaaaatga gatttatatt aaccacattt gcggcaatcg
     1081 gcctgttggg ctttgttgtt ggcacagcac atgctgatgc aggggcaggt aaagctgcct
     1141 tcgcggctaa aaaatgtacc ggctgccact atacggatgg tccggccaag gaaagaagta
     1201 ttgccgaaca attggccaaa aaaggcccag aactttggta tgcgggttct aagtttcaag
     1261 ctgcttggct caaaggctgg ctccaggacc caaaaccaat acgtcattta gcctataatt
     1321 ctttgaccaa aaagaatgca ggtgatcatc ccaaattatc cgctggtgat gccgctaatg
     1381 tcgccgactt tctgatgagc aaaaccacca gcgaagttaa agccggtgtt attaagccga
     1441 agaaaaacct caaaggcaaa aaaatcttca ctaagaaaat gccctgtacc ggctgtcatc
     1501 aatcagccag caaaaaaggc aaagttaccg gtggcttcag tggcccgact ttggttggtg
     1561 tcggcaagcg gctcaaccct gactggattt atgcctattt aaaaaacccc acgcacttca
     1621 aaccgttcaa agcgatgccg accttcgctg gaattttgaa ggataaggat ctcaaaaaag
     1681 tcgccaaaca tgtcagcaac ctcaaataag gatggaatag agcaatgaaa aaactgatca
     1741 aaatatctct attggccgcc gtatttgggc tggcctggtt gatcaacggc caaaccgcaa
     1801 cagctgctgg cgctgaggaa accttcaaat tctattgcgc ccaatgtcat ggccttgaag
     1861 gcaaaggcaa aggtcctaat gtgaccaagg atttcccggt tacgccgcga gatttcacca
     1921 atgccaaaga aatgagcaag ctttcagaca attatattcg tggcatcatc atggatggcg
     1981 ggccgtcgca aagcaaatca ccgttgatgc cgccatggag caaaacgatc ttagatgtcg
     2041 acgttaacgg tctgataaag catttgcgtg gtctatgcaa atgtaaaggg aaggcaggct
     2101 agaaaacgaa aaagattaaa atgagcacga ttacaacaaa attgacggcg gccccgaaaa
     2161 aaataaccca gtcaatgggc cggaagtttt tgaaattaaa catgcttaat tctctttgtt
     2221 tttcggcctc attttatcct tcaaaactaa gttgatcaat cttggtaata gaaacggttt
     2281 gaaaacatga attcagaagc tccacagaat aatgaatcca cctggttcgg accggcactg
     2341 ttcaccgccg tgctgatcgc catctgtgtg gttttttggg caatgctgtt ttagaccggt
     2401 tagataggga gacgccaagg tgaaaaatta tcttatgcct ttcattatct cgttcgctat
     2461 cagcggtgtc ggtttttttg tgctcgattg ggggctcatg aatttgcagg gaatatccct
     2521 atttttccac cagtaaggat ttgaaggcaa gtaccagaat gaagc
//
LOCUS       DASCNL010000126         3047 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000299122, whole genome shotgun sequence.
ACCESSION   DASCNL010000126 DASCNL010000000
VERSION     DASCNL010000126.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000299122"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="QF359_01545"
     CDS             complement(<1..613)
                     /locus_tag="QF359_01545"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO85622.1"
                     /translation="MTVVDIHTHMFGNSWLDMLHKHGGPTYSAGTMEDGRDYLVEKGA
                     TACALEKEAFDYDARIVAMNEHGIDVSIVSLTSPNVYWGGEEVSAKTAQLANDEMVAG
                     QIAYPDRIRWFASLPFEYPDKAIAELNRALEKGAVGVMVTASINGKHLIDPLFKPVWA
                     EINKHALPVLVHPTAPFGANEAEFGIERILMPGLGFMFDTTIGI"
     gene            742..1083
                     /locus_tag="QF359_01550"
     CDS             742..1083
                     /locus_tag="QF359_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HJO85623.1"
                     /translation="MAKNTDLKKIKKWLEGLRKELLERVELTEDDRKPVELDQSQVGR
                     LSRMDAMQVQEMALEQERRREIELHKIDAALERIKAGEYGFCTHCGEDISPKRLEFDP
                     AAPLCVDCASS"
     gene            complement(1088..2446)
                     /locus_tag="QF359_01555"
     CDS             complement(1088..2446)
                     /locus_tag="QF359_01555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HJO85624.1"
                     /translation="MTPPETVKITIKRHARDIFHLAVPTIMARAGMMVMMIVDAVMVG
                     HYSAPELAYQSIGLAPMMFLMVSSFGLLTGTLVMTAYYLGAKEPEQCGAVWRRSITYA
                     FALGLIGLVLSSFGEEFLLLTGQSQELAQGGGKIIGIIGWSMPPMLIFVATGFFLEGL
                     KRPKVGMYIMIIGNLFNVILNWVLVFGHFGAPEMGAAGSAWSTVCVRAIMMGCVLYYV
                     WNLKNHEELAIRRHANLILGGGWSAWVKLRQIGLGAGASSAIESGAFSSMSLFAGLLG
                     VMPLAAFSIAFNALALTFMFALGLGSATAVCVGNAHGRGERRDMVYAGWTGLGLTVIA
                     MSLLGIILLAFNVQIAVGFTDNLDLVSRAAPLIGFIALVLIADGGQSVMAHALRGCSE
                     TWVPAALHVIAYLFIMIPLAWYLSLPAGRGAIGLFEAILIASIVSLSLASIRFWIISR
                     KN"
     gene            2675..2779
                     /locus_tag="QF359_01560"
     CDS             2675..2779
                     /locus_tag="QF359_01560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase domain-containing
                     protein"
                     /protein_id="HJO85625.1"
                     /translation="MDKMIANVEASLDEFGGPWLLGEEYTLADVVVTP"
BASE COUNT          816 a          775 c          777 g          679 t
ORIGIN      
        1 cgatgccaat cgtggtatca aacataaagc ctaatccagg catcaaaata cgctcgatac
       61 caaactcagc ttcattggcg ccaaaggggg ctgtcggatg aaccagtacg ggcagtgcgt
      121 gtttgtttat ctcagcccat accggcttga acaacggatc aatcagatgc ttgccgttga
      181 tgctggccgt gaccataacg ccaaccgcac ctttctcaag agcccggttc aattcggcga
      241 tagctttatc cggatattcg aatggtaggg aggcaaacca gcgaatgcga tccggatagg
      301 ctatctggcc cgccaccatc tcatcatttg ccagctgggc ggtcttggcg ctaacttctt
      361 cgccgcccca ataaacattg ggcgaagtta atgaaacaat tgaaacgtcg ataccgtgtt
      421 cattcatggc gacgatgcgc gcgtcatagt cgaaggcttc cttttccaag gcgcaggcag
      481 tcgccccttt ttccaccaga tagtcgcggc catcctccat cgtgccggcg ctgtaggtcg
      541 ggccgccatg tttatgcagc atgtcgagcc aggaattgcc aaacatgtgg gtgtgaatgt
      601 cgacgacggt catgtttcag gtccctttaa actggtaata gattgatgcc gacaaactag
      661 aatttaagaa tactggatac aacaccaatt tgtgctagaa ttacagacct gtggccagtg
      721 tactaaactt ggttgaaaac catggcaaaa aacaccgatt taaagaagat aaaaaagtgg
      781 cttgaagggt tgcggaaaga acttcttgag cgcgtcgagt taaccgaaga tgaccgcaaa
      841 cctgttgaac ttgaccagtc tcaggtgggc cgactgtctc gtatggatgc tatgcaagtg
      901 caggaaatgg ccctcgaaca agaacgtcgc cgcgaaatcg aattgcataa aattgacgct
      961 gctcttgaac gaattaaagc aggtgaatac ggcttttgta cccattgcgg tgaagatatc
     1021 tctcccaaga gattagagtt tgatcccgcc gccccgcttt gtgtcgattg cgccagcagt
     1081 tagcagccta atttttccgt gaaattatcc agaagcgaat tgacgcgaga gatagcgaaa
     1141 cgatgctggc gatcagtatt gcttcgaaaa gcccaatcgc accacgtccg gcagggagtg
     1201 acagatacca ggcgagtggg atcataatga acagataagc gatgacgtga agggctgccg
     1261 gcacccaagt ttcgctacat ccccgcaaag catgggccat gacgctctgg ccgccatcag
     1321 caattaacac caaagcgatg aagccaatta atggtgcagc gcggctgacc aaatccagat
     1381 tgtcggtgaa ccccacagcg atttgcacat tgaaggcgag cagaataatg ccgagcaggc
     1441 tcatcgcaat gaccgtcagc ccaagaccgg tccagccggc ataaaccatg tcacgccgct
     1501 ctcctcgccc gtgggcattg ccgacacaca ctgccgtcgc cgagccgagc ccgagggcaa
     1561 acataaaagt aagcgccagc gcgttgaagg cgattgaaaa agctgcgagc ggcatcacac
     1621 ccaacaatcc ggcaaacagg ctcatcgagg aaaaggcgcc ggattcgatg gcgctactgg
     1681 caccggcacc gaggccgatt tgacgcagtt ttacccaagc actccagccg ccacccaaaa
     1741 tcaaattggc gtgcctgcgg atagccaatt cctcgtgatt tttgaggttc caaacgtaat
     1801 atagaacaca gcccatcatg atggctcgta cgcatacagt tgaccaggct gatcccgccg
     1861 ctcccatttc cggtgcgccg aaatgaccaa agaccagaac ccaattgagg atgacgttaa
     1921 ataaattacc gattatcata atatacatgc cgactttggg ccgtttgaga ccttcgagaa
     1981 aaaagccggt ggcgacaaat atgagcattg gcggcatgct ccagccaata atgccaataa
     2041 tcttgccgcc tccttgggct agttcctgag actgtccggt tagcagtaag aactcttcac
     2101 caaaactcga taataccaag ccaatcagcc caagagcgaa ggcgtaggtt atcgagcggc
     2161 gccacacggc gccgcattgt tcaggttcct tagccccgag gtagtacgcc gtcatcacca
     2221 acgtgcccgt caacaggcca aagctgctca ccataagaaa catcatcggt gccagcccga
     2281 tactttggta ggccagttcc ggcgctgaat aatggccaac cataactgca tcgacgatca
     2341 tcatcaccat catgccggcg cgcgccataa tagttggcac cgcgaggtga aaaatatcgc
     2401 gcgcatgacg cttgattgtt atcttaacgg tttcgggtgg tgtcataatt gtgtctgttc
     2461 agtgatggag aggtgctgat agcatgagtc ctccaatgtt tcccgcacta tttttttttg
     2521 ctttaaggtg aaataaattt ctggggaaaa atttatgtcg gcagagatgg aagcgcattt
     2581 taataaaatg accgacgtca ccaagcgcga gtaacaacga gctattcacc atgacggcgt
     2641 cgattagccc ttttttaaga acgccataaa aactatggat aaaatgatcg ccaatgttga
     2701 agcgtcgctg gatgaattcg gtggaccgtg gctgttggga gaggaataca cgctggccga
     2761 tgtggtggta acgccttaaa tgttgcggct ctcgtattta tcttttgata gtatgtggca
     2821 agatagccgg cctcgcgttg ccgagtggtg ggaacgaatt taagccctat ccaattaccg
     2881 tgaggtgatt tcgccggaca caccgacagc aaatcttgaa aaacgccaag ccaatggcgc
     2941 gaaagaacgg ccaagggtga agtaaatatc aggtctgtga attaaggcga ttctgccttg
     3001 cggttttgcc gtttgcgctt gtggatgtcg agatagcgtt tgcgcag
//
LOCUS       DASCNL010000127         2995 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000299596, whole genome shotgun sequence.
ACCESSION   DASCNL010000127 DASCNL010000000
VERSION     DASCNL010000127.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000299596"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="QF359_01565"
     CDS             complement(<1..746)
                     /locus_tag="QF359_01565"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO85626.1"
                     /translation="MMGVNLLADLTIKGRAGLLLILAILISLPFWSSSYIISVATITL
                     YLAILGQSWNLMLGFAGLLSLGHALFVGISAYLAAYVFSVLGLPPVISVFPAVLLAIL
                     MGMLIGYLGFRFSIGGVYFALLTIAFAELVRISVDHMGFIGGTEGLFLPVSEGDRKGV
                     DLINLRGHPFMFYYLAMVLAFLTLAGCRTLLKSKLGYYWQAIRDDQDAAQALGINVFR
                     YKMYAVIYSSGIAGVAGVFYAFYQNSLFPES"
     gene            complement(743..1618)
                     /locus_tag="QF359_01570"
     CDS             complement(743..1618)
                     /locus_tag="QF359_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO85627.1"
                     /translation="MDFWTLANALATGLLTGLVYGLSALGLSVIFGVIRIVNFAHGEI
                     MVMGMFFALVMFRWLGLDPMLSVPLAAAILFVFGYALQSTVISRVAHLPDHMQFLLLA
                     AIAVMIVNGSLLIFGPDPQAINISYSFDSFDIGENLIIDKTRAYAAIAAVAISGLLLG
                     FFKYSRTGKAIRACADNYLGAQVVGLKVDHLYALTFGIGAACLGAAGCVLLLLIEVHP
                     YLAPGYTLLAFVIVIIGGLGSMTGALVGGILIGMSEALAAIVLQPSMKSAFSFGLLIL
                     VLLLRPQGLMGKSVK"
     gene            complement(1655..2923)
                     /locus_tag="QF359_01575"
     CDS             complement(1655..2923)
                     /locus_tag="QF359_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85628.1"
                     /translation="MTDKVNKTKSEKTTGSIISRRQFTAGVAAVGAAASVGPWYIKNA
                     RAAEPLKVGVLLPRSGGQAQIGIDCQRGADAALPILKDLGYPELKFMLADFETKVDVA
                     RTQTAKLIDEGAHLVVGAFDSGATMAAAQVCEQRNIPLVVNIAAVPKLTGMGLKWVFR
                     NFPHGPMIVKDAFVNQKALFKMTGHTPTTVTLMHVNDTFGSSLAGALFKLAPRFKMPY
                     KIVEKISYDPYGRDLSAEVRKAKASKGEALWVVSRLNDAIMMTKEMVKQRFEPMGILS
                     TGPGWYDQEYMKATGKFGDDVISLVPWHDSNKPLSKTLEAYFAKHHPDRQVNPNHTYT
                     FEGIMVAADAYKRAGSTDAKALQAALRTTNITNNVTTAERITFDKNGQNPHVKNSAVQ
                     NRSGKNLVILPQSAAVAKPIWPMRPWKKRG"
BASE COUNT          856 a          768 c          730 g          641 t
ORIGIN      
        1 gactcaggga atagactgtt ttgataaaaa gcatagaaaa ctcctgcgac cccggcaatg
       61 cctgaggaat aaatcaccgc gtacatttta tagcgaaaga cgttaatgcc gagagcttgc
      121 gccgcatcct gatcgtctcg gatggcttgc cagtaatagc cgagcttgct tttgagtaaa
      181 gtgcggcaac cggcaagcgt caaaaaagct agcaccatgg caaggtaata aaacataaaa
      241 ggatgaccac gtagattgat caaatcaacg cctttacggt cgccttcaga aactgggagg
      301 aacaagccct cggtgccgcc gatgaaaccc atatgatcca ccgagatccg caccagttcg
      361 gcaaaagcaa tggtcaggag cgcaaaataa acgccaccga tggaaaagcg gaaaccgaga
      421 tagccgatca gcatgcccat caggatcgcc agaagaacgg ccggaaaaac actgattacc
      481 ggcggcaggc cgaggacaga aaaaacataa gcggccaagt aggcactgat accaacaaac
      541 aacgcatggc caagggatag caatccggca aacccaagca tcaggttcca ggattggcct
      601 aagattgcta gataaagggt gatggtggca acggaaataa tataagagct ggaccaaaag
      661 ggtagcgaga tcaggatagc taaaatcagc aacagcccag ctctgccttt aatcgtaaga
      721 tcggccagca aattgactcc catcatttaa ctgatttccc catcaatcct tgcggcctca
      781 gcaacaacac caggataagt aaaccgaaac taaaagctga tttcattgaa ggttgcagaa
      841 caattgctgc cagagcttct gacattccta tcaaaatacc gcctaccaaa gcgccggtca
      901 tgctgccgag accgccgatg atgacgatga cgaaagccaa taaggtgtag ccgggggcca
      961 aataagggtg cacttcgatc aacaacagaa gaacgcatcc cgctgcgccc aaacaagccg
     1021 caccaatgcc aaaggtcagc gcgtaaagat ggtcaacttt aagccctacc acttgagcgc
     1081 cgagataatt atcggcgcag gcgcggatgg ctttgccagt acgggaatat ttgaaaaaac
     1141 ccaacaacag acccgatatc gcaactgccg cgatcgccgc ataggccctg gtcttatcga
     1201 taattaaatt ttcgccaata tcgaaggaat cgaaggagta agaaatattg atggcttgag
     1261 ggtcggggcc aaaaattaac aaagaaccat tgacgatcat tacggcaatg gccgccaata
     1321 acagaaattg catatggtcc ggcaaatggg cgactcggct gatcaccgta ctttgcaagg
     1381 cgtaaccgaa gacaaacagg atcgcagcag cgaggggaac actgagcatc gggtcgagtc
     1441 ccagccagcg aaacataacc agagcgaaaa acattcccat caccataatc tcaccgtgag
     1501 cgaaattgac gatgcgaata acgccgaaaa taaccgaaag gccaagtgca gagagcccgt
     1561 agacaagccc cgtcagcagg ccggttgcca gcgcgttggc cagcgtccaa aagtccacgg
     1621 ttgctctcct attctaccta ttcaagcaac aatactaacc gcgtttcttc cacgggcgca
     1681 tcggccagat tggtttagcc accgccgcgc tttgtggcaa gataaccaaa tttttaccac
     1741 tacggttctg caccgcagag tttttcacat gcgggttttg gccgttttta tcaaacgtga
     1801 tgcgttccgc cgtcgtcaca ttattggtaa tgttggtggt tctcaacgca gcctgcaggg
     1861 cttttgcatc ggtggatcct gcccgcttat aggcgtctgc tgcaaccata atgccctcaa
     1921 aggtataggt atggttggga ttaacctgac ggtccggatg atgttttgca aagtaagctt
     1981 ccaaagtttt cgaaagcggt ttgttggaat cgtgccacgg caccaaacta atgacatcat
     2041 caccgaattt gccggtggct ttcatatatt cctgatcgta ccagccgggt ccggtgctca
     2101 ggatgcccat gggctcaaaa cgctgcttga ccatttcctt ggtcatcatg atcgcgtcat
     2161 tcaagcggct gaccacccaa agggcctcgc ctttactggc tttcgctttc ctgacttcag
     2221 ccgacaaatc ccggccataa ggatcgtagg aaatcttttc gacaatcttg taaggcattt
     2281 tgaatctcgg cgccaatttg aacagcgcgc cggcaagact tgagccgaag gtgtcattga
     2341 cgtgcatcag cgtaaccgtt gtaggcgtat gaccagtcat tttgaaaaga gccttttggt
     2401 taacaaaggc atctttgacg atcatcgggc catgggggaa attacggaat acccatttga
     2461 gtcccatacc agtcagtttc ggtacggcgg cgatattcac aaccaaggga atatttcttt
     2521 gttcgcatac ttgggcggcg gccatggtag cgccggaatc gaaagcgccg acgaccaaat
     2581 gagcaccctc gtcaattagt ttagcggtct gggtacgcgc gacatcgact ttagtttcaa
     2641 aatcagcgag catgaatttt aattccggat agccgagatc cttcaaaata ggcaaagctg
     2701 catcagcgcc acgctggcaa tcaataccga tttgtgcttg gccgccggac cggggcaata
     2761 acacaccgac ctttaacggt tcagcggcgc gggcgttttt tatataccac ggtccaaccg
     2821 atgccgcagc gccaacagcg gcaaccccag cagtaaactg acggcggcta atgattgagc
     2881 cggtcgtctt ctcggattta gtcttattta ctttatcagt cacaatatcc tcctctgatt
     2941 taatattatt cgactaagat agtaagcatg tcccttcaaa aacggaaggg ctaag
//
LOCUS       DASCNL010000128         2604 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000300596, whole genome shotgun sequence.
ACCESSION   DASCNL010000128 DASCNL010000000
VERSION     DASCNL010000128.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000300596"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..95)
                     /locus_tag="QF359_01580"
     CDS             complement(<1..95)
                     /locus_tag="QF359_01580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HJO85629.1"
                     /translation="MRKSRLSKFKQDHLMEHFVAGTTARTAARLCG"
     gene            271..855
                     /locus_tag="QF359_01585"
     CDS             271..855
                     /locus_tag="QF359_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HJO85630.1"
                     /translation="MENIEAIAVYCGSKLGASPVYAATARELGTQLAERNIRLVFGGG
                     RIGIMGEVADQVLANGGEVTGVIPHFLNDLEVAHNGVTELIMVESMHKRKHIMFHRSD
                     AFVVLPGGLGTLDECMEIITWKQLQVHSHPIVILDVEGYWKSLKLLFQDIVDGGFAHP
                     KALKLFSIVDSVDGIFEAISAAPEPDPVVLESHL"
     gene            992..2206
                     /locus_tag="QF359_01590"
     CDS             992..2206
                     /locus_tag="QF359_01590"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HJO85631.1"
                     /translation="MSKIKVVTPVVELDGDEMTRIIWQFIKDKLILPYLDIDLKYYDL
                     GVEKRDETDDQITIVSAEAIKKYGVGVKCATITPDEGRVEEFGLKEMWRSPNGTIRNI
                     LGGTIFRQPIICKNVPRLVPGWTKPIVIGRHAFGDQYRATDFVFPSDGKLTMSFMPND
                     GSEPMEFDVFDAPSGGVAMSMYNLDDSIIGFAQACMNYGLDLGWPVYLSTKNTILKRY
                     DGRFMDLFQKVYDEEFKDKFEAAGISYEHRLIDDMVACAMKWEGGYVWACKNYDGDVQ
                     SDTVAQGFGSLGLMTSVLMTPDGQTVEAEAAHGTVTRHYRQHQEGKETSTNPIASIFA
                     WTRGLQYRGKFDDTPDVVGFADALEEVCIETVESGHMTKDLALLIGPDQPWLTTQQFL
                     DKLDENLIAKMG"
     gene            2369..2578
                     /locus_tag="QF359_01595"
     CDS             2369..2578
                     /locus_tag="QF359_01595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_177722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HJO85632.1"
                     /translation="MAESVYKVVELVGTSDESWEKAAATAVERAGQTVRDLRIAEVVE
                     QDMLIENGKVSTYRAKVKVSFKFED"
BASE COUNT          664 a          595 c          658 g          687 t
ORIGIN      
        1 ccacatagtc tcgccgctgt tctagctgtt gtccccgcaa caaaatgctc cattaagtgg
       61 tcttgcttaa acttgctcag acggctcttg cgcatacttc ccatgataac accaattcgc
      121 ggttatctgg gacagcccca ttttcttagt tccctcgcat ggaccatgcc gcgactgtgt
      181 tctaataaca acgatagtta agtattaaat ttatcgctat gttgcatttg acgaaaaatt
      241 gaataagaaa ctgtcgtgga taggtgagtt atggaaaata tcgaggcgat tgcggtttat
      301 tgcggctcaa agctgggagc atcgccagtt tatgctgcta ccgccaggga gttgggaaca
      361 caactggccg aacgtaacat ccggctggtt tttggtggtg gccgtatcgg catcatgggc
      421 gaggttgccg atcaggttct ggctaatggc ggtgaagtta ctggcgtgat tccgcatttt
      481 cttaatgatt tggaggttgc gcataatggc gtaacggaac ttatcatggt cgaatcaatg
      541 cataaacgca aacatatcat gtttcaccgc tcggacgctt ttgttgtctt gccgggcggt
      601 ctaggcacgt tagatgagtg catggaaatc atcacttgga aacagcttca ggtgcattcc
      661 catccgattg ttattctgga tgtcgagggt tattggaaat cgcttaaatt attatttcaa
      721 gatattgttg atggtggttt tgcccatccg aaggcactca aattattttc gatcgtcgat
      781 agcgttgatg gtatatttga agccatcagc gccgcccctg aaccggatcc agtagtgctc
      841 gaaagccacc tttaataaca gcctttaagc cttgccaatt ggggtcttgc cccttatgtt
      901 ccgcccgtcc gtgactgata tgatgtgatt gaggcacacc cctccgaacc aaaatttgaa
      961 acctttctcc cacaatgttg gagcaccata aatgagcaaa attaaagttg tcacaccggt
     1021 cgtcgaactc gacggtgacg aaatgacacg catcatttgg cagtttatca aggacaaact
     1081 tatcttgcct tacctcgata tcgatcttaa atattatgat ctcggcgttg aaaaacgtga
     1141 tgaaaccgat gatcagatca ccattgtttc cgctgaagca ataaaaaaat atggcgttgg
     1201 tgtaaaatgc gcgacgatca ctccggacga aggccgcgtt gaagaatttg gcctcaaaga
     1261 aatgtggcgg tcgccgaacg gcacgatccg taatattctt ggtggcacaa tcttccgcca
     1321 gcccattatc tgcaaaaacg tgccgcgtct ggtgcccggc tggaccaagc cgatcgtcat
     1381 cggccgtcac gcttttggtg accaataccg cgccaccgat tttgtttttc caagcgatgg
     1441 caaactaacc atgagcttta tgccaaacga cggttctgag ccgatggaat ttgacgtgtt
     1501 tgatgcaccg tctggtggcg tcgccatgtc gatgtataat ctcgatgact cgatcatcgg
     1561 ttttgcccag gcctgcatga attacggcct tgatctcggc tggccggttt atctttcaac
     1621 caaaaacacc atcttgaaac gctatgatgg ccgctttatg gacctcttcc aaaaagtcta
     1681 tgacgaagag ttcaaagaca agttcgaagc tgccggcatt tcctatgagc accggctgat
     1741 tgacgatatg gttgcctgcg ccatgaagtg ggaaggcggc tatgtgtggg cgtgtaagaa
     1801 ctatgacggc gatgtgcaat ccgatacggt ggcccagggc tttggctcac tcggcctgat
     1861 gacttcggta ttgatgacgc cggatgggca aacggttgaa gccgaagcgg cgcacggtac
     1921 cgtgacccgt cactatcgcc agcatcaaga gggtaaagaa acttcgacca atccgattgc
     1981 atcgatcttt gcctggaccc gcggtctgca atatcgcggc aagtttgacg atacaccgga
     2041 cgtagttggt tttgccgacg cacttgaaga ggtttgcatc gaaaccgtcg aatccggtca
     2101 tatgaccaag gatttggcgc tcttgattgg cccggatcag ccgtggctga caacccagca
     2161 atttctcgac aaactggacg agaacttgat tgctaaaatg gggtagaacc ctagctatcg
     2221 attaccaaga aaacctgcac atggtgcagg cttttttttg agttaattgc agcgctgata
     2281 ttacatatag tcgttgtagg acttggtaat tgtcttatag ttatttacta attcgaaatt
     2341 gtctaatatt acaccaaggg agaaagttat ggctgaaagc gtatacaaag tagtcgaact
     2401 tgtcgggacc agcgatgagt catgggaaaa ggcagctgcg acggcggttg agcgggccgg
     2461 acagaccgtc agagatctgc gcatcgcaga agtcgttgaa caggatatgc ttatcgaaaa
     2521 tggcaaagtc agcacttatc gggcgaaggt aaaagtgtcg tttaagttcg aggattaaaa
     2581 tgatcactaa aatggagtaa cgct
//
LOCUS       DASCNL010000129         1475 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000303209, whole genome shotgun sequence.
ACCESSION   DASCNL010000129 DASCNL010000000
VERSION     DASCNL010000129.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1475)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1475)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000303209"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1475)
                     /gene="glyS"
                     /locus_tag="QF359_01600"
     CDS             complement(<1..>1475)
                     /gene="glyS"
                     /locus_tag="QF359_01600"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HJO85633.1"
                     /translation="PSLIEVELAALPWPKSMRWANRRERWVRPIQSILCIFGGNVIET
                     KHGQTMANNKTSTHRFLTNAVIEVKDFSDYKKALEIGHVLIDPADRMAKIKADAEALA
                     KKAKLSLIDDPALLEEVAGLVEWPVTLIGTIDDEFMDVPPEVLTTTMRKNQKYFALED
                     KKGNLAPNFIVVANKETPDGGAVIVAGNERVLRARLADAKFFWDQDRKETLASRTPQL
                     KDITFHAKLGTLDEKIDRVQALAADLADEVGADKDQVRSAARLAKADLVTGMVTEFAD
                     LQGLMGRYYALNDGESPEVADAIAEHYAPQGPSDACPTAPVSVAVALADKIDTLVGFW
                     AIDEKPTGSKDSYALRRAALGVIRLVIENNLRMPLLNIFESARAAGGYKTDKDEALTD
                     LLSFFADRLKVHLKEKGVRHDLISAVFALGNEDDLVRLLARVEALGAFLETEDGANLL
                     TAYKRTANILRIEEKNDKTSYDKAADAKALEQAEEQELHKVL"
BASE COUNT          318 a          409 c          376 g          372 t
ORIGIN      
        1 agaactttat gcagttcttg ctcttcggcc tgctcgagtg ccttggcatc ggcagctttg
       61 tcataactcg tcttgtcgtt tttttcttcg attcgcaata tgttggcggt gcgcttataa
      121 gcggtcagca aattcgcgcc gtcttccgtt tcgagaaagg cgcccaaggc ctcaacgcgg
      181 gccagcaaac gaacgaggtc atcttcattg ccgagcgcga agacagccga aattaaatcg
      241 tgccggacac ctttttcttt gagatgcact ttgaggcggt cggcgaagaa tgagaggagg
      301 tctgtaagtg cctcatcttt gtcggtttta tagccacctg ctgcccttgc actctcaaat
      361 atattcagta gcggcatgcg gagattattc tcaatcacca gccggatcac gcccaaggcc
      421 gcacggcgga gcgcgtacga gtcttttgag ccggtcggtt tttcatcaat cgcccagaac
      481 ccgaccaagg tatcgatttt atccgccaga gcgacggcga cgctgacagg cgcggttgga
      541 caggcgtcag acgggccttg tggtgcgtaa tgttcagcaa tcgcgtcggc aacttccgga
      601 ctctcgccgt cattgagtgc ataataacgg cccatcaagc cttgcagatc ggcaaactcg
      661 gtgaccatgc cggtgaccag atctgccttg gcgagacgcg cagcagagcg cacttgatct
      721 ttatcggcgc cgacctcatc ggcgagatca gcagccaggg cttgtacccg gtcaatcttt
      781 tcatccaacg taccgagctt ggcgtgaaac gtaatgtctt taagttgcgg cgtgcggctc
      841 gctaatgttt ctttgcggtc ttgatcccag aaaaacttgg cgtcagccaa acgggcacgc
      901 agcacacgtt cgttaccggc aactatgacc gcgccgccat ccggcgtttc tttattggca
      961 acgacaatga agttcggtgc taaattgccc ttcttgtctt ccagcgcaaa atatttctga
     1021 tttttgcgca tggttgtcgt cagcacttcc ggcggcacat ccatgaactc gtcatcaatc
     1081 gtccctatta gagtgaccgg ccattcaacc agcccggcaa cttcttccag caaggccgga
     1141 tcatcgatta aagagagttt ggctttcttg gccagtgcct ccgcatcagc tttaatcttg
     1201 gccatgcggt cagccggatc gatcagcaca tgcccgatct caagcgcctt tttgtaatca
     1261 gaaaaatctt tgacttcgat aacggcgttg gtgagaaaac gatgggtgct cgttttgttg
     1321 ttcgccatgg tttgaccatg cttcgtctca ataacattgc cgccaaaaat acacagaatg
     1381 ctttgaatcg gcctcaccca gcgctcgcgc cgatttgccc agcgcataga cttcggccaa
     1441 ggtagcgctg caagctcaac ttcaatgagc gatgg
//
LOCUS       DASCNL010000130        11633 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000306550, whole genome shotgun sequence.
ACCESSION   DASCNL010000130 DASCNL010000000
VERSION     DASCNL010000130.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 11633)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11633)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11633
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000306550"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..587
                     /locus_tag="QF359_01605"
     CDS             <1..587
                     /locus_tag="QF359_01605"
                     /inference="COORDINATES: protein motif:HMM:NF012993.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HJO85634.1"
                     /translation="TTFDAPFGAISGLICGENSNPLAVYTMMAMHTMVHVAAWPPHFG
                     GTRRMHKDIRAVTPGLAYSLGAFVINSASTVTDELIDLYAATDEDREHLASLKNVGTV
                     SIINPSGDIIAESTGGGDQILYADADLNEVYGAKLVHDYAGHYNRFDIFSVSINRHAP
                     KSLNLGNEASQPTAQPETSTSLYPHLEVLEGGGE"
     gene            complement(1053..2342)
                     /locus_tag="QF359_01610"
     CDS             complement(1053..2342)
                     /locus_tag="QF359_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HJO85635.1"
                     /translation="MCADYTNPETIVLHTGHHGDATTGSVAVPIYQTTSYQFNDTQHA
                     ENLFALKELGNIYTRIMNPTHDILEQRVTAMEGGVASLALASGQAASMYSVMNLCRAG
                     DNFVSSTDLYGGTWNLFANTLKDFGVECRFIDPSDPEAFAKATDDKTRCYYAETLPNP
                     KLNVFPIQEVADIGRKLSVPLIMDNTATPILCRPFDHGAAAIVYSTTKYIGGHGTSIG
                     GILVDGGNFDWEAGGDKFPTLNEPDPSYHGAVWTEAVKPLGPIAYILRARVILLRDVG
                     AATTPSNAFNAIQGLETLPLRMREHCANTQKVVEYLRGHDKVTNVIHPSVQDGETRRR
                     ADAYLKGGYGGLVGFELKGGKDAGRKFIDSLEMLFHVANIGDARSLAIHPASTTHSQL
                     SPEQAQTGVTNGYIRLSIGIEHIDDIIADIDQALATA"
     gene            complement(2458..3000)
                     /locus_tag="QF359_01615"
     CDS             complement(2458..3000)
                     /locus_tag="QF359_01615"
                     /inference="COORDINATES: protein motif:HMM:NF013707.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HJO85636.1"
                     /translation="MAVTEIRFAGSGGQGLILSARMLFRALTLEGKTVARSQGYEPTS
                     RGGFCFSDVVAGDGDLDYPLTTGLNYLLVLDQVGVVPSQSLLRKGAMVIADERLTPEP
                     PTKNVDLHRIPLTDQAIAIGNIRVANIIGLGLMCGLGGFCGKDALTEAIKLEMPKNFL
                     ELNLEALVAGFAAVSELQAA"
     gene            complement(3000..3878)
                     /locus_tag="QF359_01620"
     CDS             complement(3000..3878)
                     /locus_tag="QF359_01620"
                     /inference="COORDINATES: protein motif:HMM:NF014794.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO85637.1"
                     /translation="MNKIAPEDYANNQATPPGDFEIKDYLRLDLMPHFMCPGCGHGIA
                     LRALIWAIHELSIEKDNLAIVSGIGCSGRVGAYIDASTFHFTHGRPLAMATGLKLVRP
                     ELEVIVISGDGDCLAIGGNHLIHACRRNLDITCLMLNNEVYGMTGGQVSPTTSETMLT
                     TTTTTGNMEPAFDACKLAEAAGAGLVGREVTLQVPTLKNLIKEGIAHDGFSFLEIISD
                     CTEVYGRKNDLGESSEMILKQKSDLRPEAFYDTVDQPFRPNKLETGVFVRNNRPEYGA
                     AYRAHTRKGNTKVGGK"
     gene            complement(3878..5014)
                     /locus_tag="QF359_01625"
     CDS             complement(3878..5014)
                     /locus_tag="QF359_01625"
                     /inference="COORDINATES: protein motif:HMM:NF006412.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HJO85638.1"
                     /translation="MSGNLEHLHGNHACALAAVAAGCRFFAGYPITPSSEIAERMSRE
                     LPKVDGTFIQMEDEIASLSAVLGASSGGVKSMTATSGPGFSLKQENLGYASLAEIPCV
                     IVNVMRGGPSTGMPTRPAQSDVMQSRWGSHGDHPVIVITPDSVKEVYSETIRAFDLSE
                     KFRVPVVLMFDQLIGHLLETVEVANVKKLKTIERKAAKGSKDKFEPYAITKDAVPPMA
                     RPGDGMRVHTTGLTHAESGFPTQDTETVTRNMDRLLSKLEINKKEIEKYECIETGDAE
                     YLIVAIGISARAARRAVTDLRQAGVKAGLFRPITLWPFPEDAYRNAAAKAKAVLVPEM
                     NAGQLVLEIERLTSDASQVVGLNKIDGEAIAPAEIVAKIEELVK"
     gene            complement(5015..5977)
                     /locus_tag="QF359_01630"
     CDS             complement(5015..5977)
                     /locus_tag="QF359_01630"
                     /inference="COORDINATES: protein motif:HMM:NF013707.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HJO85639.1"
                     /translation="MDKLSVQETKSKKGGRAKKAKTQKAEMTKNVLIVGVGGQGVIMI
                     SKVLALLCQTQGYQVKQSEVHGMAKRGGGVFSHVRFGEEVWSPTIPMGEADVLIALEW
                     AEGLRWLPHLKHDTGIFIADTQQIVPPFACRNRTAGAQTAYVKETPTEILEKVADGYA
                     LDAGGFAEELGNSRVANTILLGALSASLDFADEDWLNIIAKFVPKGSEKVNEQAFMKG
                     RDWIIEVRENPEEMPREATQPEMPIPPAGDVDISLDIIDDWCKSCDICVRLCPERCLE
                     LNEQQIVRLKKPDACTGCRLCEWLCPDFAITVNRTPVNKKKEAA"
     gene            complement(5988..7823)
                     /gene="iorA"
                     /locus_tag="QF359_01635"
     CDS             complement(5988..7823)
                     /gene="iorA"
                     /locus_tag="QF359_01635"
                     /EC_number="1.2.7.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043805 - indolepyruvate ferredoxin
                     oxidoreductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase subunit
                     alpha"
                     /protein_id="HJO85640.1"
                     /translation="MNKLDSVRSSKKLVDQSRPMTGNEAIARGAWEAGVKVAAAYPGT
                     PSTEILENMATYNADDVVAQWSTNEKVSVDTAIGASLSGVRALAAMKHVGLNVAADSV
                     MSVTYIGVHAGLVIVVCDDPGLHSSQNEQDTRVFARLANIPVLEPADAQEALDFTRLA
                     FDLSEFFDTPVIVRATTRLSHTRSSVSIGPRTEVEPKGWVDDYRKTVMIPGHARIRHP
                     VVVERVEKLSDYFSASPLNRWDKGDRSYGIITHGTCYPYVKEVVPDASILKIAASYPL
                     PEKLIQEFTATVDRVIVVEELEPVLEVEIRALGIPAEGKSLFPRVGELAPEVLREGLA
                     RAGLIEAATALHDWQVEPLARPPVLCAGCPHTTSYMALRAIDALVPGDIGCYTLAAVE
                     PLQSIDVTVCMGASIGNAVGMAKANTSDRPIVATIGDSTFLHSGIPPLIDAVYNDANI
                     TVIILDNKITAMTGGQNHPGTGKTLRGEQTHEVDYEELCKSVGVKWIKTVDPYDTGEL
                     FQALREATEFRGVSVLISYRPCVLDPVKIKGPALVVKAATCTACQACMNLGCPAITWI
                     DELFEDKHKVEINPVSCIGCSLCAQICPSDCIQPLAPLTETSVIS"
     gene            8387..8719
                     /locus_tag="QF359_01640"
     CDS             8387..8719
                     /locus_tag="QF359_01640"
                     /inference="COORDINATES: protein motif:HMM:NF040427.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6455 family protein"
                     /protein_id="HJO85641.1"
                     /translation="MESTVFQIYVAIIMVAVFGGLFMWFQRSETAGSAKRLTGMMSRF
                     GLDPRSATQGDLITKTIMKAVRWQCRKCPTEGYCERWLCGNVEGNNTFCPNAQTFRYL
                     STTGEKTG"
     gene            8800..9354
                     /locus_tag="QF359_01645"
     CDS             8800..9354
                     /locus_tag="QF359_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJO85642.1"
                     /translation="MMNIKSLHHVAYRCNDAKETAEFYTNVLDMPYVAAVSETSVPST
                     GETSPYMHIFFGMADGSLVAFFEVPQSPPMQKDQNTPEWVQHLAMNVDSMEEMLAAKE
                     KLEANGVEVIGPTDHTFVQSIYFFDPNGHRLELAYNSARPGMMEQLQETAEPMLAKWE
                     EEKMVLRDAAWVHDGTGADAFPEA"
     gene            9439..9666
                     /locus_tag="QF359_01650"
     CDS             9439..9666
                     /locus_tag="QF359_01650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85643.1"
                     /translation="MHDANEFWYEALNATPSVPLGGAFWDSGAETFVHKGSNGRWMDV
                     LSDKESTKYETMAVKELGDEYAHWFKTGKLP"
     gene            complement(9735..>11633)
                     /locus_tag="QF359_01655"
     CDS             complement(9735..>11633)
                     /locus_tag="QF359_01655"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85644.1"
                     /translation="KVGTDGALALSMCNVLANELEALDVAYLKAKTNGPYLIGSDQQY
                     VRDPASETPLVWDENARQARPFDDVDSANMALFGEFEVDGVICHPSFQLLKDHLKKFT
                     PEWAEEISTVPADNIRRLAGEFATEARIGSTIVIDGVTIPYRPVAAIAFRGAQGHINS
                     VYNFLAVDLLNQLVGAADVVGSCLGYNPTCHGNPGTSKPWYQPEPDKDGLMITGMWMG
                     YHYPYPVGEPRQPTNVGLQDLFVMGMTSPFLDSTDREKLWDQFDLPYRPEVLFNCGAN
                     LLMSIANKDVVAESLKKYKFFVSFDLLMTETSEFADIVLPDCDYLQSLDSRSNFPFIF
                     SLPAGMGEWCWPIRQPVVEPYGEQRRAAEVLLDLADRVGFRRDLNAAYNASYNLEPPY
                     RLEGDHTYTYEEICDADLKNNFGPEMGYDWFKEHGLYKWPKKPEEVYWRAFVDVRVPI
                     YWEWMPRTGEAIAAIAEPRGMAIPRQHYSPLADWIPCASHEHHDDNFDFSAFYYRDIV
                     HTNSYTMENAWLDEAAQLDPFSYTIALNTVAGKKIGLVNGDAIRVTTVMGRSVEGQVR
                     LTEAIHPEGLGIAALAGHWGDGMPVAKGKGVFFNELLELDYEHCNPVNLNLDLCVRVK
                     VEKIGDTP"
BASE COUNT         2911 a         2984 c         2939 g         2799 t
ORIGIN      
        1 tgactacttt tgatgcgcct ttcggagcca ttagtgggct gatttgcggc gagaattcca
       61 atccgctggc tgtctacacc atgatggcca tgcacaccat ggtacatgtg gccgcctggc
      121 cgcctcattt cgggggcacg cgaaggatgc ataaagacat ccgagcggtg acccccggac
      181 tggcttattc cctgggcgct tttgtcatca attcggccag cacggtcact gacgagttga
      241 ttgatcttta cgccgcgact gatgaagatc gagagcacct ggcgtctctc aagaatgtgg
      301 ggacggtctc gatcatcaat ccgtccggcg acatcattgc agaatccacc gggggcggtg
      361 atcaaatcct ctatgccgac gccgatctga acgaagttta tggcgccaaa ctggtacatg
      421 actatgccgg tcactataac cgcttcgata ttttctccgt cagcatcaac cgccacgcac
      481 ccaaatctct gaatttggga aatgaagcgt cgcaacccac tgcccaaccg gaaacctcaa
      541 cgtcgctgta ccctcatctc gaggtgctgg aaggcggtgg agaatagctt ttcgtatcca
      601 gtattaacag taaacccatc ggaataatcc ggttaaattt atggagaagg gattcgtatc
      661 cggtgatgcg gccggtcttc aaattcagat cctatccgct gatggcgaga gaaacgtcgg
      721 cagccgcact tcaattggga cagataatgc agaaactctt tgtggacaat ggaaaagtgc
      781 aatttcgggt tcatcaaatc atcattgagt gcgctaaaaa ccatctagat agcaattcgt
      841 aagcgttcct cttctggacc ttccgatcga accgagtatc gtttggagat atgtgccgca
      901 attaagtcgg cattttttcc ttgattgcgc ataggggccc agatgccccg gccctctgaa
      961 attctggaat aatatttgtc atgggagaaa tctaataaat aaaagaggtg aggagaagat
     1021 caatatcttc tcctcgcctt tatctgagag cactaagcgg tggcgagcgc ttgatcaata
     1081 tcagcaatga tatcgtcgat atgctcgata ccaatcgaca accgaatata accattggta
     1141 acaccggttt gcgcttgttc cggtgatagc tgagaatgcg tcgtcgatgc tggatggatc
     1201 gccaaacttc tggcatcgcc gatattcgcc acatggaata gcatttcaag ggagtcgata
     1261 aacttgcggc cggcatcttt accacctttt aattcaaaac caaccagacc tccataacca
     1321 cctttcaagt aagcatcggc acgacggcgg gtttcaccat cctggacgct cggatggatt
     1381 acattcgtaa ctttgtcatg acctcggaga tattccacga ctttctgagt attcgcacaa
     1441 tgttcacgca tacgtaatgg cagggtttca agaccttgaa ttgcattgaa tgcattagaa
     1501 ggtgttgtcg ctgcgccaac atcacgtaat aaaatcacgc gtgcgcgcaa gatataggca
     1561 atcggaccaa gtggtttaac ggcctcggtc cataccgcac catgatagct cgggtcgggc
     1621 tcattgagag tagggaactt atcaccgccg gcttcccaat caaaattacc gccatcaacc
     1681 aaaatgccgc cgattgaagt accatgccca ccgatatatt tggtcgtcga atacacgatg
     1741 gccgcagcgc catgatcaaa cggtcggcag agaataggtg tcgccgtgtt gtccatgatc
     1801 aacggtacgc ttaatttgcg gccaatgtcg gcaacctcct gaatggggaa aacattaagt
     1861 tttgggtttg gcagtgtttc cgcatagtag caccgggttt tatcatctgt ggctttggca
     1921 aatgcttcgg gatcacttgg atcgataaag cggcactcga caccaaaatc ttttaaggta
     1981 ttggcaaata ggttccaggt gccaccatat agatcagtcg aactgacaaa attatcaccg
     2041 gcacgacata aattcatcac cgaatacatt gatgccgctt ggccagaagc caatgccaaa
     2101 ctagcgacac caccctccat tgccgtaaca cgttgctcaa gtatatcgtg cgtggggttc
     2161 atgatccgag tgtaaatatt gcctaactct ttaagcgcaa agagattttc agcatgctga
     2221 gtatcgttga attgatatga ggttgtttga tagatcggca cagcaacgga ccctgttgtc
     2281 gcatcgccat gatggccggt gtgtaaaaca atggtttcgg gattggtata gtcagcgcac
     2341 atcttattac tccttatagt ttggtgaatt tagtatgtca gatgtcaact aagaaagatc
     2401 gtttatcaga attttaccct atgatagaaa ctcaatataa ctcccattgt taattggtta
     2461 ggctgcttgg agttcactga cggcggcgaa gccggcaaca agagcttcga gattaagctc
     2521 caggaagttc ttcggcattt ccagtttgat tgcctcggtc agagcatcct taccgcaaaa
     2581 gccaccaaga ccgcacatca ggccaaggcc gatgatatta gcgacccgga tattgccgat
     2641 ggcaatggcc tgatcggtca aggggatacg gtgaagatca acattcttag tgggaggctc
     2701 aggcgttagc ctttcatcgg caatcaccat ggcgcccttt cgcaacaggc tttgcgacgg
     2761 caccacaccg acctgatcta acaccagcaa ataattcaac cctgtggtga gtgggtaatc
     2821 gagatcgccg tcaccggcaa cgacatcgga aaaacaaaag ccgcccctag atgtcggttc
     2881 atagccttga gagcgggcca ccgtcttacc ctccaaagtg agggcgcgga aaagcatacg
     2941 ggcggagaga atcaaaccct gaccaccgct gccggcaaaa cgaatttcgg tcacagccat
     3001 tatttacccc ccaccttggt attgcccttg cgggtgtggg cccgataggc ggcgccatat
     3061 tcgggtcggt tgttgcggac aaaaacgccg gtctccaact tgttcggtct aaacggctgg
     3121 tcgacggtgt cgtaaaaagc ttcaggccgg agatcgcttt tctgtttgag aatcatttcc
     3181 gagctttcgc caagatcgtt cttgcgacca tatacttcgg tgcagtcaga aataatttcg
     3241 aggaaggaaa agccatcatg agcaatgcct tccttgatca aatttttcag cgtcggcacc
     3301 tggagggtaa cttcgcggcc aaccaagcca gccccagcgg cttcggccaa tttacaggca
     3361 tcaaaagccg gttccatatt gccggttgtt gttgtcgtcg tcagcatggt ttcagatgtg
     3421 gtcggcgaca cctgaccgcc ggtcatgccg taaacttcgt tgttgagcat caggcaggta
     3481 atatctaaat tacggcggca ggcatggatc aaatgattac caccgatcgc cagacaatcg
     3541 ccatcaccgg aaatcacgat aacttccagc tcgggacgga ccagcttcaa tcctgtggcc
     3601 atggccaaag ggcggccgtg ggtgaaatgg aatgtgctag cgtcaatata ggcgccaacc
     3661 cggcccgaac acccgatgcc tgaaacgatg gccagattgt ccttctcaat actgagctcg
     3721 tggatcgccc atatgagtgc ccggagcgca ataccgtggc cgcaacccgg acacatgaaa
     3781 tgaggcatca aatcgagcct aagataatcc ttaatctcga aatcacctgg cggggtggct
     3841 tggttgttgg cgtagtcttc gggagctatt ttattcatta ttttaccagc tcctcgattt
     3901 tggcaacgat ttccgccggc gcgattgctt caccgtcaat tttgttcaac ccaactactt
     3961 ggctagcgtc tgaagtaagc cgctcaattt ccaggacgag ttgtcccgca ttcatttccg
     4021 gcactagcac agctttggct ttggccgccg cgttgcgata agcatcttcc ggaaaaggcc
     4081 agagggtgat cggccggaac aggcccgctt tgacgccagc ttggcgcaaa tccgtcaccg
     4141 cccgtcgggc agcgcgggcg ctaatgccga tggcaacgat cagatactca gcatcgccgg
     4201 tctcaatgca ttcatatttc tcgatctctt ttttattaat ttcgagttta ctcaatagcc
     4261 gatccatgtt gcgggtgacg gtttccgtat cctgggtagg aaagccgctc tcggcatggg
     4321 taaggccggt ggtatgcact ctcatgccat cacccggccg ggccatcggc ggcacggcgt
     4381 ctttggttat ggcgtaaggc tcgaatttat ctttgctgcc tttggctgct ttgcgctcaa
     4441 tggtttttag ttttttgaca ttagccactt cgacagtttc caatagatga ccgatcagct
     4501 ggtcgaacat taagactacc ggcacgcgga atttttccga tagatcgaag gcgcggattg
     4561 tttcgctata gacttctttc accgaatccg gcgtgatgac gatgactgga tggtcgccat
     4621 gactacccca gcgggactgc atgacatcag attgagccgg gcgggtcggc ataccggtag
     4681 acggccctcc gcgcataaca ttgacaataa cgcagggaat ctcggccaat gatgcatagc
     4741 ccagattttc ctgtttgagc gaaaagccgg ggccgctggt ggcggtcatg gattttacgc
     4801 cacccgatga ggcgccaagc acagctgaca gggaagcaat ttcgtcttcc atctgaatga
     4861 aggtgccgtc tactttgggg agttcccgcg acatgcgttc ggcgatttcg gatgacgggg
     4921 tgatcggata gccagcaaaa aagcggcacc cggcagcgac ggcggccagg gcacaggcgt
     4981 gattgccgtg caagtgttct aaattaccgg acatttaagc tgcttccttt ttcttattaa
     5041 cgggcgtccg attaacggtg atagcaaaat cggggcaaag ccattcgcaa agccggcagc
     5101 cggtgcaggc gtccggtttt tttaaccgaa ctatttgctg ttcattaagt tctaagcagc
     5161 gctccgggca cagacgcaca caaatatcgc agcttttaca ccagtcatcg ataatatcga
     5221 gactgatatc gacgtctccg gcaggcggga taggcatttc tggctgggtt gcttcccgcg
     5281 gcatttcctc aggattttca cgcacttcga taatccagtc tcggcctttc atgaaggcct
     5341 gctcattgac cttttccgaa cctttgggaa cgaatttagc gatgatatta agccagtctt
     5401 cgtcggcaaa atctaaactt gccgataagg cacccaagag aatggtgtta gctacccggg
     5461 agttacccaa ttcttcggcg aatccaccag catccaaagc ataaccatcg gccacttttt
     5521 ccaatatttc ggtcggagtt tccttgacgt aggcagtctg agcaccagcg gtacggttgc
     5581 ggcaggcgaa cggcggcacg atttgttggg tatcggcgat gaaaataccg gtgtcgtgtt
     5641 ttaagtgggg caaccagcgc aagccttcag cccattctag ggcaatgaga acgtcggctt
     5701 cacccatcgg aatggttggc gaccaaacct cttcgccaaa acgaacatga ctgaacacgc
     5761 cgccgccgcg tttggccatg ccgtggactt cgctttgctt gacctgatat ccctgagttt
     5821 gacaaagcag cgccagtacc ttggatatca tgatgacgcc ctgcccgccg acgccaacga
     5881 tcaaaacgtt tttcgtcatt tcagctttct gggtttttgc tttttttgcc cgaccgcctt
     5941 ttttggattt ggtttcttga actgatagtt tatccattat ttcatactca tgatatcact
     6001 gacgtttccg tcaatggcgc taacggctga atacaatcgg acggacatat ctgggcacag
     6061 agcgaacaac cgatgcagga gaccggattg atttccacct tgtgtttatc ttcaaataat
     6121 tcatcgatcc aggtgatcgc cgggcagccc aaattcatac aggcctgaca ggcggtgcaa
     6181 gtggcggctt tgacaaccag ggccggcccc ttgattttga ctggatcaag gacacaggga
     6241 cgatacgata tcagtaccga aacacccctg aattcagtgg cttcccggag cgcctgaaac
     6301 aactcaccgg tatcgtatgg atcgactgtc ttgatccact tgacgccaac cgatttacaa
     6361 agttcttcat agtcaacttc atgggtttgt tcgcctctga gcgttttgcc cgtacccgga
     6421 tggttttggc caccggtcat ggcagtaatt ttattgtcga ggataataac cgtaatgttg
     6481 gcgtcattat agacggcgtc aatcagcggc gggatgccgg aatggagaaa agttgaatcg
     6541 ccaatggtgg cgacaatggg ccgatcggag gtgttggctt tggccatgcc gacagcgttg
     6601 ccgatgctcg cccccatgca gaccgtgaca tcgatagatt gaagcggctc gacagcggcc
     6661 agagtgtaac agccgatatc tcccggcacc aaggcgtcaa ttgcgcgcaa ggccatataa
     6721 cttgtggtgt gaggacagcc ggcgcacagt acgggtggac gggcaagggg ctcaacttgc
     6781 caatcatgaa gtgccgtcgc ggcttcgatc aaacctgccc tggccaaacc ttctcggaga
     6841 acctccggtg ccaactcacc gacccgtggg aataaggatt taccttcggc ggggataccc
     6901 aaggcgcgga tttcaacctc caggaccggt tccagttcct cgaccacaat gacccggtcg
     6961 acggtggcag taaattcctg aattagtttt tcgggcagtg gataggaggc ggcaattttt
     7021 aaaatgctgg catccggcac gacctctttg acgtaggggt aacacgtgcc atgggtgata
     7081 ataccatagc ttctatcacc cttgtcccaa cggttgagag gtgacgccga aaaatagtcc
     7141 gatagttttt cgacccgttc aaccaccacg ggatggcgga tccgcgcgtg gccggggatc
     7201 atcacagttt tcctgtaatc atcaacccaa cctttgggct cgacttctgt tctggggcca
     7261 atggacaccg aacttctggt atgagacagc cgggtcgtgg cccggacaat caccggggta
     7321 tcaaagaact cactgagatc aaaagccaaa cgggtaaaat caagggcttc ttgggcatcg
     7381 gccggctcga gaaccgggat attcgcgagt cgggcaaaaa ctcgggtatc ctgttcgttt
     7441 tgcgagctgt ggagccctgg atcatcacac accacaatca ccaatccggc atgaacgccg
     7501 atataggtaa ccgacataac tgaatcggca gcaacgttca atccgacatg tttcatcgcg
     7561 gccaaggccc gcacacccga gagcgaagcg ccgatagcgg tgtcgacgga gactttctca
     7621 ttagtcgacc attgagccac cacatcgtcg gcattatagg ttgccatgtt ctcaagaatt
     7681 tcggtactgg gtgtgcccgg ataggccgcc gccactttga caccagcttc ccaagcgccg
     7741 cgggcaatgg cttcattacc ggtcatcggt cgcgattggt ccaccagctt tttgctggac
     7801 cgtacagaat caagcttatt catcggatcc ccagtgtttt tatgtgtatg tgttgtctgt
     7861 aattaattaa aattcgtgct cccgccatac cggtcagcaa caaacaacaa ttactgtaga
     7921 ggcaatttta gggcggtaac acgttatgcg gcatcatata gaggttttct ttgatataaa
     7981 tcaagaatta aggaactctg aactatgtga tttggcataa ttgaagggtt tttttaataa
     8041 aaaaccaaat atctctcaaa cctcgccata actgctgagg tcgtcttaag gataggcccg
     8101 ttgcctaaaa taaaatgtcg cgacggcgtg tgcgtcatgg taaaatctgt tttattagta
     8161 gcttgcaatt atcatctgag caaaagggat gatttttcat ggcaaaaaat accgaaaacg
     8221 atacagaaga cgcttaagag ccttttgaaa actagccatc cgatcttgac gagcttacac
     8281 gacgcctcac ctgtaaagcg gccaacttga ttgcggtcaa tgcagttttc agcatcctgt
     8341 ggtatgaaaa ttcctactct gggcaacaat gtcgaggagt ggagtaatgg aatcaacagt
     8401 ttttcaaatt tatgtcgcca tcatcatggt ggccgttttt ggtggcttat tcatgtggtt
     8461 tcaaagaagc gaaacggccg gctctgctaa acgcctaacg ggcatgatgt ctcgatttgg
     8521 ccttgatcca aggagcgcaa cccagggtga cttgataact aaaaccatca tgaaagcagt
     8581 gcgatggcag tgcaggaagt gcccgactga gggctattgc gaacggtggc tgtgtggaaa
     8641 tgttgaaggt aacaacactt tttgccccaa cgcacagact ttcagatatc tttcaacgac
     8701 aggagaaaaa accggctgaa gccgggcgat caagcattgc attatttggt gcggtaccgc
     8761 tgcacccaaa ttataacgct agttttacag aggagaataa tgatgaatat taaaagcctt
     8821 caccatgtag cgtatcgctg caacgacgcc aaggaaactg ccgaatttta taccaatgtt
     8881 ctcgacatgc cctatgtcgc ggccgtctct gaaaccagcg tgccatctac cggcgagaca
     8941 tcgccctaca tgcatatctt tttcggtatg gccgacggtt ctctcgtggc cttcttcgaa
     9001 gtaccgcaat ccccgcccat gcaaaaagac cagaacacgc cggaatgggt ccagcatttg
     9061 gcaatgaatg ttgacagtat ggaagagatg ttggcggcca aggaaaaact cgaagccaac
     9121 ggcgttgaag tgatcggccc taccgatcac accttcgtcc aatcgatcta tttctttgat
     9181 cccaacggcc accggcttga actggcctac aattcggccc ggccgggcat gatggagcaa
     9241 ctccaggaaa ctgcggaacc gatgctcgcc aagtgggaag aagagaaaat ggtcctgcgc
     9301 gacgccgcct gggttcatga cggaaccggt gctgacgctt tccctgaagc ttaagcaata
     9361 aacccgagtt acaccacgat ccaaagtctg cacatggcta ccaccgtctg gtaggtatcc
     9421 aatagactta acgacgtatt gcatgatgcc aacgaatttt ggtatgaggc acttaatgca
     9481 acaccgagcg tacccttggg cggagctttc tgggatagcg gcgctgaaac atttgtccac
     9541 aaaggctcca acgggcggtg gatggatgtt ctcagtgaca aggaaagcac caaatatgag
     9601 accatggcgg taaaagaact cggcgacgaa tatgctcatt ggtttaagac aggaaaattg
     9661 ccttaagata cccaaataag tattttgccg ttaactaaaa gagttcgctt ttgggtctat
     9721 gaccaagcct cctcttacgg cgtatcgcca attttctcaa cttttacccg gacgcacaaa
     9781 tcgagattca aattgaccgg attgcaatgt tcataatcga gttccagcag ctcattaaaa
     9841 aacacgcctt tgccttttgc caccggcatg ccatcacccc aatggcctgc cagggcggcg
     9901 ataccaagtc cttcgggatg aatggcttcg gtcaggcgga cttgcccctc aactgaacga
     9961 cccattacag tggtgacacg aatggcatca ccgttcacca gcccaatttt ttttccagcc
    10021 acggtgttga gagcaatcgt gtaggaaaat ggatcaagct gggcggcttc atcgagccac
    10081 gcgttttcca tcgtataact attcgtgtgc acgatatcgc ggtagtaaaa ggctgagaaa
    10141 tcaaaattat catcatgatg ctcgtgcgag gcgcaaggaa tccaatcggc caatggagaa
    10201 taatgctgtc gcggaattgc catgccgcgg ggttcggcaa tggcggcgat cgcctctccg
    10261 gttcgaggca tccattccca atagatcggc acccggacat caacaaaggc gcgccaataa
    10321 acctcctcag gttttttcgg ccatttatat aagccgtgct ccttgaacca gtcatagccc
    10381 atctccgggc caaaattatt ctttagatcg gcatcacaaa tctcttcgta agtataagta
    10441 tgatcgcctt ccagccgata gggcggttcg agattgtaag acgcgttata ggcggcgttg
    10501 aggtcacggc gaaagccaac ccggtcggct aaatcaagca acacctcggc ggcgcggcgc
    10561 tgttcaccat aaggctcgac gacaggctgg cggatcggcc agcaccattc acccataccg
    10621 gcaggcaggc tgaaaataaa tgggaagttt gaacgcgaat ccagcgattg caggtagtcg
    10681 caatcgggca acacgatatc ggcgaattct gacgtttccg tcatcagcaa atcaaaactg
    10741 acgaagaatt tgtatttttt gagagattcc gccacgacat ctttgttggc gatactcatt
    10801 aacaaattag cgccacaatt gaagaggact tccgggcgat acggcagatc aaattgatcc
    10861 cacaatttct cacgatcagt agaatccagg aagggcgagg tcatgcccat gacaaacaga
    10921 tcctggagcc caacattagt aggctggcgc ggctcaccga ccgggtatgg ataatggtag
    10981 cccatccaca tgccggtaat catcaagcca tctttatccg gttcgggctg ataccagggc
    11041 ttgctggtgc cgggattgcc gtgacatgtc gggttgtagc caaggcagga gccaaccaca
    11101 tcggccgcgc cgaccaattg gtttagcaga tcgacggcca ggaaattata aaccgaattt
    11161 atatgtccct gggcgccgcg aaaggcgatg gccgcgaccg gccggtaagg tatcgtaacg
    11221 ccatcgataa caatggtgct gccaatcctg gcttcagtgg cgaactcgcc ggcaaggcgg
    11281 cgaatattat ctgccggcac agtggagatt tcctcggccc attctggcgt gaatttttta
    11341 agatgatcct taagcagttg gaatgacggg tgacagataa caccatcaac ttcgaattct
    11401 ccaaagagcg ccatgtttgc agaatcaacg tcgtcgaatg gccgcgcttg gcgagcgttc
    11461 tcatcccaca ccaatggtgt ttcgcttgcc ggatcgcgga catattgttg atcagaacca
    11521 atcagatatg gtccatttgt cttggctttg agataagcta catccaaagc ttcaagttca
    11581 ttcgctaaga cattgcacat tgatagagct aacgcaccat cggtgccaac ctt
//
LOCUS       DASCNL010000131         3787 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000311224, whole genome shotgun sequence.
ACCESSION   DASCNL010000131 DASCNL010000000
VERSION     DASCNL010000131.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3787)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3787)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3787
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000311224"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            382..1200
                     /locus_tag="QF359_01660"
     CDS             382..1200
                     /locus_tag="QF359_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85645.1"
                     /translation="MVEKFAPVGHGPSELLPKVASVITIGVTGPTQGTWRAPAKVMTS
                     VGANVGRIYRVAVGLSFHIESHYGYRSIYCPPHVDPEFGARLPMQSLKLHAELAGIGA
                     RSLAGDILLEPEFGLLYYGSVYTEMPLAADEPMADNPCPAPSCVKLYKESGQTPCQKF
                     CPVQCLSGELNDDGTVAEMNFDMYRCAELCQQYENMPTMIERAFTTNDQLAREEMLYG
                     AEAQSFFYKATAGVDTNAQCFECMRVCPIATQGKGVDPIRRGAAAREAAGMGGS"
     gene            1203..2609
                     /locus_tag="QF359_01665"
     CDS             1203..2609
                     /locus_tag="QF359_01665"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HJO85646.1"
                     /translation="MPYGVSEQMIDTYSELIFDLGLNKQTRSGDPIRNLDHEAWLEQR
                     EATGLNDPEIAGKIGLAVEQVTFIRNITERRLFRLNQYRKLYRLGGGLRYREDRYQDP
                     EEKFDMSDDALALRVAMHFSPSQAKKFIDAGLWSDEVLGDLMAVKNPDDLAIISTAES
                     VTYKQLGQRAKQMAAGLAEIGVRRGDVVAALLPMGPELFVSYFACAQMGTVFLPLVPS
                     LSCFEIGEYVRHCHSRIVVCENTAGEVPIGAVAYHDLVAAQVSDRPGFVQVAADPILL
                     TTSMRKNEQPDAGILTHQNMMSAVHTVMPLLKLAPQDQIDLSALPVSSVSLMLAQCAF
                     TAGVSAVTDPASATHTVTPTKDGWYEISVADHKAHFWGQSDTLAVLSAKQNNSAAIAL
                     PGVETRVVDPDGAILGDGETGELQIRGPSLIAGYLAYSTSSAEIWTADGWYKTGTEVT
                     VSDQSGGTVGYSIKGVNQ"
     gene            2606..>3787
                     /locus_tag="QF359_01670"
     CDS             2606..>3787
                     /locus_tag="QF359_01670"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85647.1"
                     /translation="MMDLSFWVSKNTDFMPGKTAIRFEGQDITYSEFDRQIHLYARTL
                     KHSFDVAPGDRVAFLGVNTPSLLCTFFACARLGAIFSPLNWRLTAPEHRYMLQDSGAK
                     ILISDEEFRANADAIRSDIPDCILVANDFEDADWRSLVAELAASEGDDTNPNVTMDMP
                     FMLVYTSGTTGRPKGAVLSQNNMQIHAYNSVHYSQMSMQDHILTVLPMFHVGGLNIQT
                     TPAFYAGATVTMHRRFEPPATLKAIVEERPDLAVLVPAALQAIFSLPEWPEADISSLR
                     SVAIGSSMVPLPHIEALQSRGVPAPQVYGSTETGPIVIYQNPESAFAKPGSAGKAGLH
                     SEMRIVDDQGNDLPQGQSGEIAVRGGNIFIEYWNNKEATRDSIKDGWFLTGDVGYLDE
                     DG"
BASE COUNT          876 a          953 c         1036 g          922 t
ORIGIN      
        1 gcatttcaac gccggaacca gacactggcg gcgaaatttc cacggtgaaa gttatttcgc
       61 cgtttaagaa tttacggaca agcgggcttt gaacaggagg cgagtagtta atcataaaaa
      121 atgtaccctt tttccagtac ctcgattttc aataaggata ccaggattgt ctagctaata
      181 ataattgaag cggcgcttga ttaaacaaaa tattcacagt taaatagttt aaacctaaac
      241 taattatcgc aacggctgtt aaaatccgct taggtacatt ctcgggaggc tcacatatca
      301 gattttgacg aagccaaagc cgcactaaag gactacgcct taaaacgggg tgcggcggcc
      361 ttaggtatcg ccgatagcgc cgtggtcgaa aagtttgcgc cggttggtca tggtccgagt
      421 gaactgttgc ctaaagtcgc ctcggtcatc accattggtg ttaccggccc gacccaaggc
      481 acgtggcggg caccagccaa agttatgacg tcggtcggtg ccaatgtcgg gcggatttac
      541 cgggtggctg tcggcctgtc ttttcatatc gaatcccatt acggctatcg ctcaatctac
      601 tgcccgccgc atgtcgatcc ggagttcggc gcgagattac cgatgcaaag tctcaaactg
      661 catgccgagc ttgccggtat cggtgcgcgt tcactggccg gcgatatcct gctggagccg
      721 gaattcggct tactctatta cggctcggtc tataccgaaa tgccgttggc cgctgatgag
      781 ccgatggctg ataatccgtg cccagcaccg tcctgcgtaa agctttataa agagtccggc
      841 cagacgccct gtcaaaaatt ctgtccggtg caatgtctga gtggcgagtt gaacgatgac
      901 ggcacggttg ctgaaatgaa ttttgatatg taccgctgcg ccgagctctg ccagcaatat
      961 gaaaatatgc caaccatgat tgagcgcgct tttacaacca atgaccagct ggcccgtgag
     1021 gaaatgcttt atggcgccga agcccagtcc tttttttata aagcgacggc tggcgtcgat
     1081 accaatgcgc aatgctttga gtgcatgcgg gtttgcccca tcgccactca aggcaagggc
     1141 gttgatccga tccgccgggg tgctgccgcc cgcgaagctg ctgggatggg aggttcttaa
     1201 gcatgcccta tggtgtatca gagcaaatga tcgacaccta tagtgagctg attttcgatc
     1261 ttggcctcaa caagcaaaca cgcagcggtg atccgattcg caatctcgat catgaagctt
     1321 ggctggaaca acgcgaagca accggactta acgatccgga aattgccggc aaaatcgggc
     1381 tggcggtcga acaggtcacc ttcatccgta atattaccga gcgccgcctg ttccggctca
     1441 accaataccg caaactttac cggctcggtg ggggtttgcg ttaccgggag gatcgctatc
     1501 aggacccaga agaaaaattc gatatgagtg atgatgcgtt ggccctgcgt gtggccatgc
     1561 atttctctcc gtcacaggct aaaaaattca ttgatgcagg cttatggtcg gatgaggtgt
     1621 tgggtgattt aatggcggta aaaaatcctg atgacctggc gataatttca accgcagaga
     1681 gcgttaccta caaacaatta ggccagcgtg ctaaacagat ggcggccggt ttggctgaga
     1741 ttggcgttag gcgaggcgat gtcgttgccg ctttgctgcc aatgggtcca gaattattcg
     1801 tcagctattt tgcctgtgct caaatgggca cggtatttct gccgttggtg ccatctttaa
     1861 gctgctttga aattggtgaa tatgtgcggc attgccattc tcgcatagtg gtctgtgaaa
     1921 acacggcggg agaggtgcca atcggcgcgg ttgcttatca cgacttggtc gcggcgcagg
     1981 tctctgaccg gccgggattt gtccaagtcg cggctgatcc tattttgcta accaccagca
     2041 tgcgtaaaaa cgagcaaccc gatgccggta tcctgaccca tcagaatatg atgagcgctg
     2101 tgcataccgt aatgccgctg ctgaaacttg cgccgcaaga ccaaattgat ctatcggcct
     2161 taccggtcag cagtgtgagc ctaatgttgg cgcaatgtgc ttttacagcg ggggtatcgg
     2221 cggtaactga tcctgccagc gccactcata ctgtgacacc cacaaaagat ggttggtacg
     2281 agatttctgt agctgaccat aaagcacact tttggggtca aagtgacacg ctggctgttc
     2341 tatcagctaa gcaaaacaat agtgctgcca tagcccttcc cggtgttgaa actcgggtcg
     2401 ttgaccctga cggtgcgatt ttgggtgacg gtgaaaccgg tgagctgcaa attcggggtc
     2461 cgtcattgat tgccggttat ctggcatatt cgacatccag tgccgagata tggaccgctg
     2521 atggctggta caagacgggc acagaagtta ctgtctctga tcagtccggc ggcactgttg
     2581 gttattcgat aaagggggtg aaccaatgat ggatttatct ttctgggttt ctaaaaacac
     2641 cgatttcatg ccgggtaaaa ccgccatccg gtttgaaggg caggatatta cttatagcga
     2701 atttgatcgc cagattcacc tctacgcccg gacgttaaaa catagctttg acgttgcgcc
     2761 cggtgaccgg gtggctttct tgggcgtcaa cacaccgagc ctgctctgca ctttttttgc
     2821 ctgcgcgcgc ttaggagcaa ttttctcgcc cttaaactgg cgtctgacgg cgccagagca
     2881 tcgctacatg ttgcaggatt ccggcgctaa aatactgatc tccgatgaag agtttcgcgc
     2941 taatgctgat gcgatccgaa gcgacatccc ggattgcatt ttggttgcca atgatttcga
     3001 ggatgcagat tggcgcagtc tggtcgccga actcgcagcc tccgagggcg atgacaccaa
     3061 tccaaacgtg accatggata tgccgtttat gctggtttac acctctggca ctaccgggcg
     3121 gccgaaaggc gctgtgttga gccaaaacaa tatgcaaatc cacgcttata acagtgttca
     3181 ttattcccag atgagtatgc aggatcatat tttgacggtg ttgccgatgt ttcatgttgg
     3241 cggccttaat atccagacca ccccggcctt ttacgccggc gccacggtca cgatgcaccg
     3301 gcggtttgag ccgccggcga cactgaaagc gattgtcgag gagcgccctg acttggctgt
     3361 gctggtgccg gcagcattgc aagctatatt ctcgctgccc gaatggccgg aggcggatat
     3421 ctccagcctt agaagcgttg ccatcggctc ttcaatggtg ccgctgcctc atattgaggc
     3481 gctgcaaagc cggggtgtcc cagcccccca agtatatggc tcaaccgaaa ccggcccgat
     3541 tgtcatctac cagaacccgg aaagcgcttt tgccaaacca ggttcggcgg gtaaggctgg
     3601 gctgcattcg gaaatgcgga ttgttgacga tcagggcaat gacctgccac aaggccaatc
     3661 aggtgagatc gcggtgcgcg gtggtaacat ttttatcgaa tattggaaca ataaagaggc
     3721 cacccgggac tcgattaaag acggctggtt tttgaccggt gatgtcggct atctcgatga
     3781 agacggt
//
LOCUS       DASCNL010000132         6291 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000313233, whole genome shotgun sequence.
ACCESSION   DASCNL010000132 DASCNL010000000
VERSION     DASCNL010000132.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6291)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6291)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6291
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000313233"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="QF359_01675"
     CDS             complement(<1..341)
                     /locus_tag="QF359_01675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HJO85648.1"
                     /translation="MSTRILIVEDEPPLIEVLRYNLASEGFSTLVATDGEEALLLVEE
                     ENPDLIILDWMLPELSGIDVCRRLRETKNFKTIPIIMLTARGEESDKILGLDAGADDY
                     VVKPFSPSELIA"
     gene            complement(392..1447)
                     /locus_tag="QF359_01680"
     CDS             complement(392..1447)
                     /locus_tag="QF359_01680"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJO85649.1"
                     /translation="MATAINNFNAHLLEAFPDPIILLNRDREVVFANQAALEVLEANY
                     DGRDLALSFCVPEVLTAAEAVVNGEVIREVDISLSVPVPRNLKIRIVRFTDSTVAEDG
                     AVALMVFQDISSETLAEQMRQDFVANVSHELRSPIASLIGIIETLQGPAKDDPEGRER
                     FLSIMRDESQRMARMIDDLLSLSRVETSERLRPQEQVSVIDLLEMTRELLIGRAEERK
                     MELVFDFAADIPTLAGDRDELMEVFQNLIDNAIKYGREASPVRVTAELVEHVPEIGGA
                     GLAVAIENKGEGIVPDQLPRLTERFYRVDKGRSRKLGGTGLGLAIVKHIVSHHRGHLS
                     IVSTVGKGATFTVYLPL"
     gene            complement(1651..2037)
                     /locus_tag="QF359_01685"
     CDS             complement(1651..2037)
                     /locus_tag="QF359_01685"
                     /inference="COORDINATES: protein motif:HMM:NF018294.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HJO85650.1"
                     /translation="MNKLSKEQIELATEEMISFANFDEARSLTMEEIDQLVRDARQAQ
                     AQVAGQMIKAVIKFIGNIFSGIGNSLRAATSYDELARLSDRELADIGLNRDQIASVAF
                     DDLAIRSAKSNFTVYGSGMKIARPTN"
     gene            complement(2253..4511)
                     /locus_tag="QF359_01690"
     CDS             complement(2253..4511)
                     /locus_tag="QF359_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003959 - NADPH dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional salicylyl-CoA
                     5-hydroxylase/oxidoreductase"
                     /protein_id="HJO85651.1"
                     /translation="MKIACIGGGPASLYFSLLAKKTNPEWDITVYEQNPDNVTWGFGV
                     VFSDETLDNFKDVDFDTYKAITDSFVHWDDIEIFFKGHKITSRGHGYAGMQRLKLLQI
                     LEARAKELGVTMIHDVFVGSLDNHQDADLIVAGDGIASSIRDQHVDEFGADVVMRPNK
                     FTWLGSTKAFDTFTFYFNQNKHGLWRAHCYQYMPGTSTFIIETTENTWRRAGLENASE
                     PETVAYCSKVFKKELGNDKLITNNSVWRTFPRVKNRTYYHDNIVLLGDALHTAHFSIG
                     SGTKLAMEDAVDLFECINEHPGDLASALPVFQEKREPDVDSLQRAAQVSMEWFENVER
                     YYDVMEPLQFSYSLLTRSLRINHENLRLRDQELVNQVDNWVADTAAEQSGLAREESTP
                     PPIFTPYKLRGMVLQNRIAVSPMCMYSAKDGLIGNFHLVHLGSRAMGGAGLIMTESTA
                     IRADGRISPGCAGIYKDEHVTAWERVVDYVHQNSYAKIGMQLNHAGRKASTNVQWEGG
                     DQAPLTEGSWPIMAASPIAYSADNPTPKEMTREDMDRVRDDFVTAAGRAQDAGFDMLE
                     LHCAHGYLLNTFISPQTNARGDEYGGSMANRLRYPLEVFAAVRAGWPDEKPISVRISA
                     TDWVKNGITAEDAVEIAKAFKQVGCDILDVSSGQVVSKEEPEYGRLFQLPFSDRIRLE
                     ADMPTMTVGNIQSYADADSIIASGRGDICVIARMHLFDPYWTRHAAKELGYDLAMPLQ
                     YKAVEDYTPRWV"
     gene            4669..5061
                     /locus_tag="QF359_01695"
     CDS             4669..5061
                     /locus_tag="QF359_01695"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012429996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HJO85652.1"
                     /translation="MEILQPPGWPRPKGYSNGISVKGTMVFIAGQVGWNEQEEFETDS
                     LPGQARQALKNILAIMTEGGAKPEHMTRMTWYLGDKDEYNASLKELGHVYQEVMGKVY
                     PVMTGIQVAGFVEEGAKLEIEVTAVIPD"
     gene            5329..5490
                     /locus_tag="QF359_01700"
     CDS             5329..5490
                     /locus_tag="QF359_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85653.1"
                     /translation="MAPSALTVADNCQQRAFVVGAETTYDPAIHDLSKTSCELYIDGG
                     FQEKAYGSK"
     gene            5535..5675
                     /locus_tag="QF359_01705"
     CDS             5535..5675
                     /locus_tag="QF359_01705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85654.1"
                     /translation="MSEFDLALEAGMVVMTGSFTKQYRFENSIEIEARFDPFGSVTAK
                     LT"
     gene            complement(5707..6126)
                     /locus_tag="QF359_01710"
     CDS             complement(5707..6126)
                     /locus_tag="QF359_01710"
                     /inference="COORDINATES: protein motif:HMM:NF024966.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJO85655.1"
                     /translation="MDQLEILAIKDACQSVSLRFGRLQDDRRYEDLPKLATSDATYTR
                     LGEELSLADFIAWVKTMPPNKTRHFVTATEIDIVNKDSAKGLTYYTLYLYGGEEEPPY
                     PLEGPFVVGEYHEEFARTDDGWKIKAREARIIFRKQK"
BASE COUNT         1672 a         1560 c         1464 g         1595 t
ORIGIN      
        1 gcgattaact cagatggaga gaacggcttc acaacataat catcagctcc tgcatcaaga
       61 cctaaaatct tatcgctttc ttcaccccga gcggtcagca taatgattgg aattgttttg
      121 aaattcttgg tttcgcgcaa gcgccggcaa acatcaatac ctgatagttc cggtaacatc
      181 caatcaagaa taatgagatc cgggttttcc tcttcgacca gcaacaaggc ctcctcacca
      241 tcggtcgcaa ccagggttga gaaaccttcg ctcgccaaat tgtagcgtaa tacttcaatg
      301 aggggtggtt catcttcgac gatgaggatt cgtgtgctca atggttctag ctttctttgt
      361 catcacggct aattaattaa agttactacg tttaaagcgg taaatagacg gtaaaagtgg
      421 cgcctttgcc aaccgtactt acaatgctca aatgacctcg atggtggctg acaatatgct
      481 taacaatggc gagcccaagc ccggtaccac cgagtttgcg cgagcggcct ttgtcaaccc
      541 ggtaaaaacg ctcggtcagc cggggcaatt ggtcgggtac aattccttcg cccttatttt
      601 caatcgccac cgcaaggccg gcaccgccaa tttccggaac gtgttcaaca agctcggcgg
      661 taacgcgaac cggcgatgct tcgcggccat acttaatggc gttatcgata aggttctgaa
      721 aaacttccat tagctcgtca cggtcgccgg ccaaagttgg gatatcagcg gcaaaatcaa
      781 acaccaattc catttttctt tcttctgccc gcccgattaa aagttccctg gtcatttcaa
      841 gcaggtcgat gacgctaact tgctcttgcg gacgtaatcg ttcactggtc tccacgcggg
      901 aaagtgacag cagatcatca atcatccgtg ccatccgctg agattcatcc ctcataatgg
      961 atagaaatct ctcgcgccct tccggatcat cctttgctgg gccttgcaag gtttcgataa
     1021 tgccgatgag agatgcgatt ggtgagcgca gttcatgact gacattagcg acaaaatcct
     1081 ggcgcatctg ttcggccaag gtttcagaac tgatatcttg aaagaccata agagcaaccg
     1141 cgccatcttc cgcgacggta gaatctgtaa agcgaacaat acgaattttt aaattacgtg
     1201 gcaccggaac cgaaagggat atatcaactt cccgtatgac ttcaccgtta acaaccgctt
     1261 cggcggcagt caggacttcc ggcacgcaaa atgacaaagc caaatcacgg ccgtcataat
     1321 ttgcctcgag aacttcaagc gccgcctgat tagcaaaaac cacctcccta tcccggttta
     1381 acaaaataat agggtcagga aatgcttcaa gcaaatgggc attaaaattg ttgattgctg
     1441 ttgccaattg cagccagctc ccaattttta tacaaaatta aacctcagcg gattgtccta
     1501 ctctgctaaa cgggggtctg tcaaaactta ccacagaaag aaaaaccccc agatcgggcg
     1561 atccaggggt ctcagcatta acaaggtatt taataaggta tccagggagg tatttctaat
     1621 tccaattagg ccgcgatgtg atcaacccag tcagttggtt ggccgggcaa ttttcatacc
     1681 gctgccatag acagtaaaat ttgatttggc ggaacgtata gccagatcgt caaaggcgac
     1741 actggcaatt tgatcacggt tcaggccgat atcggcaagt tcacggtcag acaaacgggc
     1801 gagttcatca taagaggtag cagcacgcag gctgttacca ataccagaaa aaatattgcc
     1861 gatgaattta attacggctt tgatcatttg gccggcgact tgcgcctggg cctgccgtgc
     1921 gtcgcgcacc agctgatcaa tttcttccat ggtcagcgac cgggcttcgt cgaaattggc
     1981 gaaagaaatc atttcttctg tggccagttc aatttgttct ttagaaagct tattcatttt
     2041 ttctcctact ttcttgctgt ccggctcaac gcgccggatc attgttgctt tgatgagaag
     2101 aatataggtc ttttgaaccg cttcagttag ggggataacc acaaaacaga catgcaaaat
     2161 acacataggt aaaaatatta tataaataaa acaataagtt atattatttt acagaattta
     2221 attagaatta atatttacgg ttttacgccc tattaaaccc aacggggcgt gtagtcctcg
     2281 acggctttat attgcaacgg catggctaaa tcgtaaccca attccttagc ggcatgacgc
     2341 gtccaataag gatcaaacag atgcatgcgg gcgatcacac aaatatcacc gcgcccactg
     2401 gcgatgatcg aatcggcatc agcgtatgac tgaatattac cgacggtcat ggtcggcata
     2461 tcggcttcca gtctgatccg gtcggaaaat ggcaactgga acaagcggcc atattccggc
     2521 tcttctttcg atacgacctg gcccgaagac acatccagga tatcacaacc cacctgttta
     2581 aacgccttgg cgatttcgac ggcatcttct gccgtgatgc cgtttttgac ccaatcggtt
     2641 gccgaaatgc ggaccgagat cggtttttca tccggccagc cagcacgaac agcagcaaac
     2701 acttccaacg gatagcgtag gcgatttgcc attgacccgc catattcgtc gccccgtgcg
     2761 ttggtttggg gggaaataaa cgtattcagc aaatagccat gcgcacaatg caattcaagc
     2821 atatcaaagc cagcgtcctg agcccgcccg gcagcagtga caaaatcatc ccgcacccgg
     2881 tccatatcct cccgcgtcat ttctttgggc gttggattgt cggccgaata agcaatcggt
     2941 gacgctgcca taatcggcca actgccttcg gtcaacggcg cttgatcgcc gccttcccat
     3001 tgaacattgg tcgaggcctt gcggccagca tggttgagct gcataccgat cttggcgtaa
     3061 gagttctgat gaacatagtc gacgacgcgt tcccaggcgg ttacgtgttc gtctttatat
     3121 atgccagcac agccaggcga aatgcggcca tcggctctaa ttgccgtgct ttcggtcatg
     3181 atcaaaccgg ctccacccat tgcccggctg ccgaggtgaa caaggtgaaa gtttccaatt
     3241 aatccatcct tcgctgaata catgcacatc ggcgagaccg cgatgcggtt ctgcaacacc
     3301 atgccccgga gcttatatgg cgtgaagatc ggcggcggcg tactttcttc acgcgctaaa
     3361 cctgattgtt cggcggctgt atcagcgacc cagttatcga cttgattgac cagttcctga
     3421 tcacgcaagc ggaggttctc gtggttgata cgcaagctgc gggtcaacag agaataggaa
     3481 aattgcagcg gctccataac atcgtaatag cgttcgacgt tttcaaacca ctccatactc
     3541 acctgggcgg ctcgttgcag tgaatccaca tcaggttcac gtttttcctg aaataccggc
     3601 aaagcactcg ccagatcgcc tggatgctcg ttgatgcatt caaagagatc gacggcatct
     3661 tccatcgcca attttgtgcc ggacccaatg gaaaaatgcg ccgtgtggag cgcatcgccc
     3721 agcaacacaa tattatcatg ataatacgtt ctatttttca cccgcggaaa ggtccgccac
     3781 accgaattat tggtgatcaa cttgtcgtta cccaactctt ttttaaatac ttttgagcaa
     3841 taagcgacag tttctggttc actggcattt tcaagaccag cccggcgcca agtattctct
     3901 gtcgtttcaa tgataaaagt cgaggtgccg ggcatatatt gataacaatg cgctcgccac
     3961 agaccatgct tattttgatt aaagtaaaac gtaaatgtat caaatgcttt ggttgagccg
     4021 agccaagtaa atttattggg ccgcataacc acgtcagcgc caaattcatc aacatgttga
     4081 tcgcgaatgg atgacgcgat gccatctccg gcaactatta gatcggcgtc ctgatggtta
     4141 tcaagactgc caacaaacac atcatggatc atcgtgacgc cgagctcttt agcgcgtgct
     4201 tccaatatct gcagcagctt gaggcgttgc atcccggcat agccatggcc acgagacgtg
     4261 atcttatgac ctttgaaaaa aatttcgata tcatcccaat ggacgaagct atcggtaatg
     4321 gctttataag tgtcaaaatc aacatcttta aaattgtcca gtgtttcatc ggaaaacacg
     4381 acgccaaatc cccaggtgac gttgtccggg ttctgctcat aaaccgtaat atcccattct
     4441 ggattggtct ttttagccaa cagcgagaaa taaagcgacg ctggaccgcc gccaatacat
     4501 gcgattttca tttaccgatt cctatctaaa tactgctggc aaaagcttgc cagaacagtt
     4561 cccttgcttt aataatttca attagttcat acttaaacag ttcaagtcta aactaatatt
     4621 taaaatcatt caagaatgtt atataaaatt agagaggaag ctacgatcat ggaaatatta
     4681 caaccaccag gctggccccg gccaaaggga tacagcaatg gtatttcagt caaaggcacg
     4741 atggttttca tcgccggcca agttggctgg aatgaacagg aagagtttga aaccgacagc
     4801 cttcccggcc aggcgcgcca agccctgaag aatattctag cgattatgac cgaaggtggc
     4861 gccaagcccg agcacatgac gcgcatgacg tggtatttgg gcgacaagga tgaatacaac
     4921 gcttcgctca aagaattggg ccacgtttac caggaagtga tgggcaaggt ctatccggtg
     4981 atgacgggta ttcaagttgc cggttttgtc gaagaaggtg ccaagcttga gattgaagta
     5041 acggcggtta ttccggatta agacgtaatc atcctcatct cgtgtatttc ctatattttg
     5101 gtgacagaat atttgagggg aaatgaaacg tgatcaattt tgatcgggcg ttggaggatt
     5161 tctgacaggc acgacaaggt gggccgtttc cgtttcagta gaaagacgaa cttgatttat
     5221 cgaccgctca tcaaatatgt ctgaaattga ttgagaaaca tacggcggat ggtgatccgc
     5281 aagcgggcta gaaaattggc ctgacagcca aggccatccg cgaacgagtt ggcgccatca
     5341 gccctgacgg tcgccgataa ttgccaacaa cgcgcttttg tcgtcggtgc cgaaacaact
     5401 tatgatccag cgatccacga tctctcgaaa acatcatgtg aactatatat tgatggtgga
     5461 tttcaggaaa aagcttatgg atcaaagtga tggaatcgaa cctcatcgcc tccattgtct
     5521 agctggcgga aaaattgtcc gagtttgatt tagccctgga agccggcatg gtagtcatga
     5581 ctggctcttt tactaaacaa taccgctttg aaaattcgat tgagattgaa gcgcgatttg
     5641 accccttcgg ctcggtgacg gcgaagctta cttagatcga ttgatttacc tctttttggc
     5701 gattccttac ttctgtttgc ggaaaatgat gcgcgcctca cgggccttga tcttccagcc
     5761 atcgtcggtg cgggcgaatt cctcatgata ttcacctacc acaaacggac cttccagtgg
     5821 ataaggaggc tcctcttcgc caccgtagag ataaagcgtg taataggtaa gccccttggc
     5881 agaatcttta tttacgatat cgatctcggt cgcggtcacg aagtggcgcg tcttattggg
     5941 cggcatggtt ttaacccagg ctataaaatc tgcgagtgag agttcctcgc ccaatcgggt
     6001 ataggtcgca tcggatgttg ccaatttagg cagatcttca taccgccggt catcctgcag
     6061 ccggccaaag cgcagcgata ccgactgaca ggcgtctttg atcgctaaaa tctctaattg
     6121 atccattttg tatccttcct ctttaaagcg cgctttcgcg gatggtaaat ttatggcgca
     6181 gttgatcgcc gatcaagtta agcgacaaca ccgtcaaaaa taaaatcagc gctggcataa
     6241 aagtaatgtg tggatcagtg ttaatatcag ggaagccttg cgcgatcatg c
//
LOCUS       DASCNL010000133         1312 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000314396, whole genome shotgun sequence.
ACCESSION   DASCNL010000133 DASCNL010000000
VERSION     DASCNL010000133.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1312)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1312)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000314396"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="QF359_01715"
     CDS             complement(<1..817)
                     /locus_tag="QF359_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HJO85656.1"
                     /translation="MTNQNEENSPEQKDGQKNANGEHLPPSAHHRVSGGTSRGFWGRI
                     RGYFLAGILVTAPLGITGYLAWVIVKFIDESVTPLVPAPYNPETYLPFSVPGLGVLIL
                     IIILTLIGALTAGLLGRWLLHTGERMLNRMPVVRSIYSAIKQIFETVMGQQSNAFREA
                     VLIEYPRRGIWAIAFITGVTEGEVQNLTEQETVNIFLPTTPNPTSGFLLFVPKDEVVP
                     LDMTVEEAIKMVISGGIVTPPDRRPLTEQKKPQVSASTYEDVDILREREKTPIL"
     gene            complement(949..>1312)
                     /locus_tag="QF359_01720"
     CDS             complement(949..>1312)
                     /locus_tag="QF359_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HJO85657.1"
                     /translation="KMTQQVLDRIVLQAGDPIFREGEHGECAYVVQEGMIDIVKNAAD
                     GDVVLGTIKKGGIFGEMALIDDQPRMASAVAASTSTVIVISRDVFQQKLQKCDPFVRG
                     LLGIFVKNIRSMVEERIS"
BASE COUNT          342 a          337 c          303 g          330 t
ORIGIN      
        1 tcaggatcgg ggttttttcg cgctcgcgga ggatatccac atcctcataa gtcgaggctg
       61 aaacttgtgg tttcttctgc tcggtcagcg gacggcggtc aggcggtgtc acaataccac
      121 cggaaataac catcttaatc gcctcttcta cggtcatatc caagggcaca acttcatctt
      181 ttggcacaaa cagtaaaaag cccgatgtcg ggttcggcgt ggtggggagg aaaatattga
      241 cggtttcctg ctcggtcagg ttttgcacct caccttcagt aacaccggtg ataaaagcaa
      301 tcgcccagat accgcgacgc ggatactcaa tgaggacggc ttcacggaaa gcattggatt
      361 gctgccccat tacagtttca aatatctgct tgatcgcgga ataaatactg cgcaccaccg
      421 gcatccggtt tagcatgcgc tcgccggtat ggagaagcca gcgcccaagt aagccagcgg
      481 tcagagcacc aatcagcgtc aggataataa tcaaaatgag cacaccgagc cccggcacgc
      541 tgaacggtag ataggtctct gggttatacg gcgccggcac caagggggtt acagactcat
      601 caataaattt aacaataacc caggcgagat aaccggttat acccagtggt gccgtaacca
      661 gtatgccagc caagaaataa ccgcgtatgc ggccccaaaa accacgactg gtgccgccgc
      721 ttaccctatg atgggcagat ggtggtaagt gctcgccatt ggcatttttc tgcccatctt
      781 tttgttctgg ggagttttct tcgttttggt ttgtcataat ctattaaatt aagccttttc
      841 gaatcgatct cgctaatttc taatataggc taaattattt cagcagccag tcctctgttg
      901 cgccaaagac attgcgcaaa ctgcatcaat tggagcctca caattacctt aactgatccg
      961 ttcttcaacc atggaacgaa tgtttttaac gaaaattccc agtaaaccac gcacgaaagg
     1021 atcacatttt tgaagttttt gctgaaatac atcccggctg atgacaataa cagtggaggt
     1081 ggatgcagcg accgccgacg ccatgcgcgg ttgatcgtca atcagtgcca tttcgccaaa
     1141 aataccacct tttttgattg tgcctaagac gacatctcca tcagcggcat ttttgacgat
     1201 atctatcata ccttcctgga caacataggc gcactcgcca tgctcgcctt cgcgaaaaat
     1261 gggatcacct gcctgtagaa cgatacgatc taaaacttgt tgggtcattt tc
//
LOCUS       DASCNL010000134         2015 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000315778, whole genome shotgun sequence.
ACCESSION   DASCNL010000134 DASCNL010000000
VERSION     DASCNL010000134.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000315778"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1233
                     /locus_tag="QF359_01725"
     CDS             <1..1233
                     /locus_tag="QF359_01725"
                     /inference="COORDINATES: protein motif:HMM:NF017828.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase family protein"
                     /protein_id="HJO85658.1"
                     /translation="SRIAEEKRGAAYVFVLGSMNEVLKTFDMPVSFPEVNALQTAIRG
                     VSRDYLDEAEDYGYSPDICGYVKADVALQLRGGDHPMGKVPIPNMMIATNGCNTYIKW
                     AEIWERMYDAPMITIDIPGTRDADTKSQPGSKDFAYEAKYVLGQIKELIEICEQVSGK
                     KFDIDKFRETLGYANEMSLGWQRVQELNKSSTAVFNALTDGTIYLGVANGFRGLPEGA
                     AYFKDLVEEMEYRVDHKIGIQETTKAGTVTLDQQFRLAFVGAPCYPSFRAFNNMFSDW
                     GGVFVTSSYLWYGSGGSCTGFEYDLTRPLESFAEGQLLMVREAMDSMFHQALMLEQSV
                     EPFGLDGVVYHPIKSCRTVSTGLADQRRYIAENIGLPTLFFESDLMDPHVVSEAQMKN
                     RADAFFEGLISRRQQMAV"
     gene            1267..>2015
                     /locus_tag="QF359_01730"
     CDS             1267..>2015
                     /locus_tag="QF359_01730"
                     /inference="COORDINATES: protein motif:HMM:NF013482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO85659.1"
                     /translation="MSIADSNMIKTAGVPTPLIDGIDKVTGTAKYTTDLDATNALVGK
                     ILRSRWSHANIRKIDISAAQALPGVVAVLTGDDCASTFGILPITEDEYALAKGRVRYK
                     GDPIAAVAAIDEETAQRALALINFDVEELPAYYTPTEARQLGAVDIHENRPGNLLRNQ
                     AYELGDVEGGFESADLVSEEAFSSTEVIHMQLERNAALADYDSNRGRLTLQSVSQVPY
                     YLHLSLAQCLDMDRSRIHIIKPFVGGGFGARA"
BASE COUNT          497 a          487 c          535 g          496 t
ORIGIN      
        1 agccggattg ccgaagaaaa gcgcggcgct gcctatgtct ttgtcctggg cagcatgaac
       61 gaagtgttaa aaaccttcga catgccggtt agctttcctg aagttaacgc actgcaaact
      121 gccattcgtg gcgtttcgcg cgactatctg gatgaggccg aagattatgg ttattcaccg
      181 gatatctgcg gttatgtcaa agccgatgtt gccttgcagt tgcgcggcgg cgatcaccct
      241 atgggtaaag tgccaatccc gaatatgatg atcgccacca acggctgcaa cacttatata
      301 aaatgggcgg agatatggga gcgtatgtat gatgcgccga tgatcaccat tgacattcct
      361 ggcacacgag acgctgacac taaaagccag ccgggcagta aggattttgc ctatgaagct
      421 aagtatgtct tgggtcagat caaggaattg atcgaaatct gtgagcaagt atctggcaaa
      481 aaattcgaca tagataaatt tagggagaca ctcggttacg ctaatgagat gagccttggt
      541 tggcaacgag ttcaggaact gaataaaagt tcaactgcgg ttttcaacgc cctgaccgac
      601 ggcactatat atttgggcgt ggccaacggc ttccgcggat taccagaagg tgcggcctat
      661 ttcaaagatt tggtagaaga gatggaatat cgggtcgatc ataaaatcgg tattcaggaa
      721 actacgaaag ctggaacagt aacccttgac cagcaattcc gcctcgcctt tgtcggcgcg
      781 ccttgttatc ccagtttccg cgcatttaac aatatgttct ccgactgggg tggggttttt
      841 gtgacttcct cctatctttg gtacggctcg ggcggttcct gtactggctt tgaatatgat
      901 ctcactcgac cgctggaaag cttcgccgaa ggccaattgc tgatggtgcg cgaagccatg
      961 gatagcatgt ttcatcaggc tttaatgctc gaacaatcgg tggagccctt cgggctcgac
     1021 ggtgtcgtct accatcccat taagagctgc cggaccgtat ccaccggact ggccgatcag
     1081 cgccgctaca tcgctgaaaa tatcggcctg ccaactttgt tcttcgaatc cgatctaatg
     1141 gatccccatg tggtttctga ggcacaaatg aaaaatcgcg ccgatgcgtt cttcgaagga
     1201 ttaatttcac gtcggcaaca gatggcggta taatattatt agctattctg ttggacaaat
     1261 ttattcatga gtattgcgga ttcaaacatg attaagacgg cgggcgttcc aaccccgtta
     1321 atcgatggta tcgacaaggt taccggtacc gctaaatata caactgatct ggatgccacg
     1381 aacgccctgg ttggtaaaat actcagaagc cggtggtcac atgccaatat tcgcaagata
     1441 gatatcagcg ccgcccaagc gcttcctggc gttgtcgctg tgctgaccgg tgatgattgc
     1501 gcttcgacgt tcggtatttt gccaataacg gaagatgagt atgcactggc gaaagggcgc
     1561 gttcgttata aaggcgaccc catcgcagct gtcgctgcca tcgatgaaga aacagcccaa
     1621 agggcgctgg cgctgatcaa cttcgatgtc gaggaactac cagcctatta cacgccgacg
     1681 gaggcgcgac aactcggtgc agtggacatt cacgaaaata gacccggtaa tctgttgcgt
     1741 aatcaggctt atgaactggg cgacgtggag ggaggtttcg aatcagccga tttggtatcg
     1801 gaagaggctt tcagcagtac cgaagtcatt cacatgcagc ttgagcgcaa tgctgctctc
     1861 gccgactatg attccaaccg ggggaggttg accctgcaat cggtctccca ggttccttat
     1921 tatcttcatt tatcgctggc ccaatgcctg gatatggaca ggagccgcat ccacatcatc
     1981 aagccttttg taggcggcgg attcggagcg cgggc
//
LOCUS       DASCNL010000135         2198 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000315807, whole genome shotgun sequence.
ACCESSION   DASCNL010000135 DASCNL010000000
VERSION     DASCNL010000135.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000315807"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="QF359_01735"
     CDS             <1..192
                     /locus_tag="QF359_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85660.1"
                     /translation="THFKIRKRARKKIDQEIFQQTVYCIISNLVLSAGKLWRIGVMGE
                     GARPENAERVLRAIKALIS"
     gene            513..1631
                     /locus_tag="QF359_01740"
     CDS             513..1631
                     /locus_tag="QF359_01740"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF012382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HJO85661.1"
                     /translation="MEGLQKPASYIRPALHDAPNKVDPPTDGALRHKGLDTSKILSMG
                     LNESCFPPSPKVIKAMQDNLSSVNLYPDAQCPHLSDIISERTGIAPDCVVWGNGSEEL
                     LKGAIDLSLSPGQGLVLPVPTFWGYKSLVAAFEADVAEVGNLPDGNTDIDGILAAIGN
                     NTRIVFLITPNNPTGRMVDQAGLEKIIAGVPENVLLCIDEAYYDFGLHAGGPNVLDIL
                     KTRNGPWFAVFTFSKAYAMAGMRIGYALCSDAQLAQALQKTTCVFNVPILAQFAGEAA
                     LKDLEYLDFILTNVAAGRDQLFDGLTELGLDPIPSVTNFVSSPVPMNARDCMTAMLDK
                     GVQINAWADPGYENFIRITVGTAEDNAVCLAALKEVLV"
     gene            1713..>2198
                     /locus_tag="QF359_01745"
     CDS             1713..>2198
                     /locus_tag="QF359_01745"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO85662.1"
                     /translation="MRDFAPLIAFKVRSYRFQWPADLCSTWAFEMENLILGWYILVET
                     GSVLLLTLFAALQFMGTLVAPWLGVLGDRIGRKIVFCSMRVIFSLLAFAIMTLAFLDL
                     LTPYVVLGLALLSGLLRPSDMVMRQALIGDTVPPESLPNALGLNRTSMDASRVFGALA
                     GA"
BASE COUNT          503 a          550 c          551 g          594 t
ORIGIN      
        1 acccatttca agattagaaa acgagccagg aagaagatag atcaggagat ctttcagcaa
       61 actgtctatt gtattatttc taatcttgtt ctgtctgccg gtaagttgtg gcggattggt
      121 gtcatgggcg aaggagcacg accggaaaat gctgaacgag ttttgcgcgc catcaaggcg
      181 ttgattagct gaaacagctt aaatcaattg gcctgatttc cagttattca gcggctgacc
      241 ggttggcaac gaatcgccat ttcaccagtt ccaaacgatc ttgaccaaaa aacggttcac
      301 catcgacaac aatagtgagc gagtatgatc ttcatccaga agactttggc ccaggagaat
      361 ttccagaagt tattatatta aaaggtaaga agggcggctt tgtcactagt atgagtatcg
      421 ataattttgc gccgcgagtt tcaaaccagt ttcaatacaa gccttagaca cttatagtac
      481 gtccatctgg aaattcctgg gagactaccc gtatggaagg cttacaaaaa cctgcgtcct
      541 atattcgtcc tgcactgcat gatgcgccaa acaaagttga cccgccaacc gacggcgcgc
      601 tccgccataa aggactggat acctcaaaaa tcctcagcat ggggttgaat gaaagctgct
      661 ttccgccttc gccgaaggtt atcaaggcga tgcaggataa tctgagctcg gtcaatctct
      721 atccggatgc ccaatgcccg catcttagtg acatcatttc agagcgcacc ggcattgcac
      781 cggattgcgt cgtctggggc aatggcagtg aggagctgtt aaaaggcgcc attgatcttt
      841 cattgtcacc gggtcaaggc ctggtactac cggtaccgac tttctggggt tataaatccc
      901 tggtcgccgc ctttgaagcc gatgtggccg aggtcgggaa cctgccggat ggtaatactg
      961 atatcgacgg tattcttgcc gccatcggta acaacaccag gatcgttttc ctgatcacgc
     1021 ccaataatcc aaccggccgc atggtcgatc aggctggttt ggaaaaaatc atcgccggag
     1081 tccctgaaaa tgtcctgcta tgtattgacg aggcttatta tgattttggt ctccatgccg
     1141 gtggccccaa tgtgttggat atattaaaaa cccgaaacgg cccatggttc gccgtcttta
     1201 ccttttccaa ggcctacgcc atggccggta tgcggattgg ctacgcgctc tgcagtgatg
     1261 cgcaactggc tcaagcttta cagaaaacca cctgtgtgtt taatgtgccg atcctcgccc
     1321 aatttgccgg tgaagcggct ctcaaagacc ttgagtatct tgattttatt ttaacaaacg
     1381 tcgctgccgg cagggatcag cttttcgacg gccttactga acttggcctt gacccaatcc
     1441 cgtctgtcac caattttgtt tcaagccccg tgccgatgaa cgcacgtgat tgtatgaccg
     1501 cgatgctcga taaaggcgtg cagattaacg cttgggctga tcccggttat gaaaacttca
     1561 tccgtatcac cgtcggcacg gcagaagata atgcggtgtg tttggctgca ttgaaagaag
     1621 ttctggttta agttcaccta aaacctgcgg caattacgtt gagctttgtt agctgtccct
     1681 tatagtggag cgccatcaag gggaataaat tcatgcggga ttttgctccg cttatcgctt
     1741 tcaaagtccg gagctaccgt tttcagtggc cggctgatct gtgctcgacc tgggccttcg
     1801 agatggaaaa tcttattttg ggctggtaca tcctggttga gaccggctcg gttctcctcc
     1861 ttacgctttt tgccgcccta cagttcatgg gcaccctcgt cgctccttgg ctcggtgtct
     1921 taggcgatcg tattggacga aaaattgttt tttgctccat gcgggtaatt ttttccttgc
     1981 tcgcctttgc tataatgacc ttggcttttc tggatctgct aacaccctat gtggtcctgg
     2041 ggctggcttt attaagtggc ctcttgcgcc cttcagatat ggtgatgcgc caggccttga
     2101 tcggtgacac ggtgccgccg gaaagcctgc ccaatgcctt agggctcaat cgaacatcaa
     2161 tggatgcgtc acgggtattt ggcgccttgg ccggcgcc
//
LOCUS       DASCNL010000136         5778 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000317601, whole genome shotgun sequence.
ACCESSION   DASCNL010000136 DASCNL010000000
VERSION     DASCNL010000136.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5778)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5778)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5778
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000317601"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1151
                     /locus_tag="QF359_01750"
     CDS             <1..1151
                     /locus_tag="QF359_01750"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO85663.1"
                     /translation="ASLVSITMLGDNLTFVTAPITMMLVGTAASTLPSALIMRQLGRK
                     WGFVIGALVGTIGSGVAAHAVAIDSFMLFNLGLFLFGLYGGTAQQYRFAAADAAPEHI
                     KAKSVSIVISMGVVGAFVGPETTLMTKNLLSTIPFEGTFWALGVFCFAAAVIVLGIDI
                     PNLTEEESQESGRPLSEIVVIPTFIVALVAALFGYAVMNLLMTATPVTMRVDVFADNN
                     IARVIQWHVVGMFAPGFFTGHLIRKFGVVRIIVIGSALLLGSVMVALHGNNFINFFAA
                     LFFLGVGWNFAFTGGTVLLTEVHTPSERAKVQGMNDFILFTGLAISSLSAGMIYHFFG
                     WMWVNLAATPLILTVLLSAIWLRSTRRKTHAAYDEAVADEQPRRSEIL"
     gene            complement(1129..1890)
                     /locus_tag="QF359_01755"
     CDS             complement(1129..1890)
                     /locus_tag="QF359_01755"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJO85664.1"
                     /translation="MTLAFTEIGAGEPLVILHGLFGSGRNWASVGKALADTYLVITVD
                     LPNHGASDWTYTVTYEGLAEATANFLTQHDLQGCTLLGHSMGGKTAMTLALSQSELIG
                     GLIVADIAPVPYDHDNLAVIEALAAVDLSGVKSRDDAEVQMAEKISDRMLRAFLLQNL
                     RREGDGFIWQINLAGLKASINDLHGFPEFDTTYDKPAVFITGAESDFVEPAHHEEIDR
                     LFPNSSVVDLPHAGHWLHADNPKAFVQAVREFLNA"
     gene            complement(1899..2378)
                     /gene="ssb"
                     /locus_tag="QF359_01760"
     CDS             complement(1899..2378)
                     /gene="ssb"
                     /locus_tag="QF359_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HJO85665.1"
                     /translation="MAGSVNKVTLIGNLGRDPEVRFSQNGDKIANLSVATSESWNDKA
                     SGERREKTEWHRVVIFNKHLAEIAEKYLKKGSKVYLEGALQTRKWTDNSGVEKYTTEV
                     VLGNFKGELTMLDGRGDGGSGGYSGGGGGSQEPDYGSGPNDSMGGSAGDDLDDEIPF"
     gene            complement(2838..5693)
                     /gene="uvrA"
                     /locus_tag="QF359_01765"
     CDS             complement(2838..5693)
                     /gene="uvrA"
                     /locus_tag="QF359_01765"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HJO85666.1"
                     /translation="MAEIKITGAREHNLKNVDVSIPRNSLTIITGLSGSGKSSLAFDT
                     IYAEGQRRYVESLSAYARQFLELMQKPDVDSIEGLSPAISIEQKTSSRNPRSTVGTVT
                     EIYDYMRLMFARIGIPYSPATGLPIEAQTVSQMVDRVLEMKEGTRLYLLAPIARGRKG
                     EYRKELQELAKKGYQRVKIDGEHYEIEETPSLEKNFKHDIEVVIDRLVIRDDIAQRLA
                     DSFETALYLADGLAFIEDADTGERATFSAKFACPESGFTIDEIEPRLFSFNNPFGACP
                     FCDGLGTQMYFDPELIVPDDRLALSENAIAFWANSSSQYYHQTLASLAKHFKFDLTTP
                     WRKLKKKQREIILYGSGSKIVPLAYDDGKQEYEIKKPFEGVVPNMERRWRETDSSWIR
                     EDLAKYQTVTTCDVCEGYRLKPEALAVKIGGKHISEITRLSISDAESWFAGLHKNLSK
                     KQNEIARRILREINERLGFLNNVGLEYLTLARSSRTLSGGESQRIRLASQIGSGLTGV
                     LYVLDEPSIGLHQRDNNRLLDTLKRLRDLGNTVIVVEHDEDAMRAADYLVDIGPGAGI
                     HGGKIIAIGSPDDIMKSSESLTGQYLTGFRQIEIPQERRPGHKGQKVSISGAEENNLQ
                     NVSIDFPLGTFTCITGVSGGGKSSLVIETLYKALARRLNGTRVHPGKHDKLSGTEFLD
                     KVVDINQAPIGRTPRSNPATYTGAFTHIRDWFAGLPEAKARGYKPGRFSFNVKGGRCE
                     ACQGDGVIKIEMHFLPDVYVQCDVCQGKRYNRETMEIMFRGKSIADVLDMTVEEGLDF
                     FKAVPPIRDKMKTLFQVGLGYIHIGQQATTLSGGEAQRVKLAKELSRRATGKTLYILD
                     EPTTGLHFEDVKKLIEVLQTLVDQGNTVIVIEHNLEVVKIADWIIDLGPEGGDKGGHI
                     VAAGTPEDVCDVAESYTGQYLAPHLGLSKKKKRKKAS"
BASE COUNT         1270 a         1535 c         1491 g         1482 t
ORIGIN      
        1 ccgcttccct ggtctcgatt acaatgctgg gcgacaatct cacttttgtg actgcaccga
       61 taaccatgat gttagtcggc accgccgcca gcaccttgcc ctcggccctt atcatgcgcc
      121 agcttggccg aaagtggggc tttgtcatcg gcgctttggt gggcacaata ggcagtggcg
      181 ttgctgcgca tgcagtcgcc attgatagct ttatgttgtt caatcttggc ttatttttat
      241 ttggccttta tggtggcacg gcgcagcaat accgcttcgc cgctgctgac gcagcaccag
      301 agcacatcaa agccaaatcc gtctccattg ttatttcaat gggcgtggtc ggcgcctttg
      361 tcggaccgga aaccacgctg atgaccaaga acctgttgag caccataccc ttcgaaggca
      421 cgttctgggc gcttggtgtt ttctgctttg ccgctgcggt aatcgttctc ggcatcgata
      481 ttcccaattt gactgaagaa gagagccaag aaagtggtcg tccgttgagc gagatcgttg
      541 ttataccgac ttttatcgtt gccttggtcg ctgctctatt tggctatgcg gtaatgaatc
      601 ttttaatgac ggcaacaccg gtgaccatgc gcgtcgatgt gtttgccgac aataacatcg
      661 cccgggttat tcagtggcat gtggttggta tgtttgcgcc cggctttttt accggccatt
      721 taatccgaaa atttggcgtc gtgcgtatca tcgtcatcgg cagtgcgttg ctgctgggtt
      781 cggtcatggt ggctctccac ggcaacaact ttattaattt ctttgccgct ctgtttttcc
      841 tcggcgtcgg ctggaatttt gcctttaccg gcggcaccgt actattaacc gaagtccata
      901 cgccgtcgga acgcgccaaa gtgcagggca tgaacgactt tattttattc accggcctgg
      961 cgatatcatc cctttctgcc ggtatgattt atcatttctt tggctggatg tgggttaatt
     1021 tagcggccac gccacttatt ctgacagttc tgttgtctgc catctggctg cgttcaaccc
     1081 ggcgcaagac tcacgctgcc tatgatgagg cggttgcaga tgagcaacct aggcgttcag
     1141 aaattctcta accgcttgaa caaaggcttt cggattatcg gcgtggagcc aatgtccggc
     1201 atgaggcaaa tcaaccaccg aagagtttgg aaacaagcgg tcgatctctt catgatgggc
     1261 aggctcgaca aaatctgact cggcgccggt gataaatacg gctggtttat catatgttgt
     1321 atcaaattcg ggaaaaccgt gcaggtcatt tatactggct ttgaggcccg ccagattgat
     1381 ctgccatata aaaccgtcgc cctcgcgccg caaattttgt agcaaaaagg cccgtaacat
     1441 gcgatctgag attttttccg ccatttgtac ttccgcatca tcacggcttt taacgccaga
     1501 caaatccacc gcagccagcg cttcaatcac cgctagatta tcgtgatcat acggtaccgg
     1561 tgctatatcg gcgacgatca agccgccaat taattcgctt tgagaaagtg ccaaagtcat
     1621 tgccgttttg ccacccatag aatggccgag caaagtacat ccttggaggt cgtgctgggt
     1681 caaaaaattt gccgttgcct cggccaaacc ctcgtaagtg accgtataag tccagtcgga
     1741 ggccccatga ttgggcagat caaccgtaat aaccaggtag gtatcggcga gcgccttgcc
     1801 aaccgacgcc caattgcggc ccgagccaaa cagcccgtgt aagatgacga gtggttcacc
     1861 tgctcctatc tcagtaaaag caagcgtcat cgcttttact agaacggaat ctcgtcgtcg
     1921 agatcatcac cggcgctacc acccatacta tcatttggac cggagccgta gtcaggctct
     1981 tgcgaacctc caccaccgcc gctgtagccg ccactgccgc catcgccgcg accatcgagc
     2041 atggttaact cgcctttgaa attgccgagc acgacttcgg tggtgtattt ctcaacgccg
     2101 gaattatcag tccatttgcg ggtttgcaga gccccttcga gataaacttt agagcccttt
     2161 ttaagatatt tttcggcaat ttcggcaagg tgcttattaa aaataaccac ccggtgccat
     2221 tcagttttct cacgccgctc accactggct ttatcgttcc agctttccga tgtagcgacc
     2281 gataaattgg caattttatc gccattttga gagaaacgga cttccggatc acgacccaga
     2341 ttgccgatta atgtaacttt gttcacgctg ccagccatag gggccccctt tgatcttcgt
     2401 tagaatgtat gtacccgact ttaggccccg gttcacgcct taaatcgcct attgcaggtt
     2461 tatgcgggcc ctagaggggt ttttttctca actgagggaa ataaattgca ataggccgga
     2521 aaaaatccgc gaatctcatc acagaagtgg tatttgagat atttcttcta gtcgtattat
     2581 tccaactaaa aaccaggtat ccagatattt ttaaaaagtg cccattgcat atgccatacc
     2641 tgcttctaga tatttttcat taaacatgag gccgccagtg cctggacccc gggtcgtgtc
     2701 cggggtgacg agggtattgg tgtggtttgt agcaaggtca ttgaaaaatt ggcttttaac
     2761 acccgcgact gcgagtcgcc actaacgcgg cgtaagccaa gcttgcggag gcaagcaccc
     2821 ggcgtttgaa gggtgattta tgacgccttc ttccgctttt tctttttact taggcctaag
     2881 tgcggggcga ggtactggcc ggtatagctc tcggccacgt cgcagacatc ttccggtgta
     2941 ccggcggcga caatgtggcc gcccttgtcg ccaccttcgg gcccaagatc gatgatccag
     3001 tcggctattt tgacgacctc aagattgtgc tcgataacga tcaccgtgtt gccttgatcg
     3061 accaaagtct gcagcacttc gatcagtttt ttgacatctt cgaagtgcag cccggtggtc
     3121 ggctcatcca gaatgtagag cgttttaccg gtggcacgcc gcgataattc cttggccagc
     3181 ttaacccgct gggcttcacc gccggacaat gtcgtcgcct gctgaccgat atggatgtag
     3241 ccgagcccga cctggaacag ggttttcatt ttatcacgga tcggcggcac ggctttgaag
     3301 aaatcgagcc cctcctcgac ggtcatatcc aatacatcgg cgatggactt accgcggaac
     3361 atgatctcca tggtttccct gttatagcgt ttgccctggc agacatcgca ttgcacatag
     3421 acgtcgggca aaaagtgcat ttcaatcttg atgacgccgt caccctggca ggcttcacaa
     3481 cgtccacctt tgacattgaa cgagaaccgg cccggtttgt agcctcgcgc tttggcttcc
     3541 ggcagcccgg cgaaccagtc cctgatatga gtaaaggcac cggtataggt cgccgggttc
     3601 gagcgcggcg tgcggccaat tggcgcttga ttgatatcga caactttatc gaggaactcg
     3661 gtgccggaca gcttatcgtg ctttccgggg tgcacgcgcg tgccgttaag ccgacgggcc
     3721 agtgctttgt agagtgtctc aatcaccagc gaggatttac ctccgccgga aacaccggtg
     3781 atgcaggtaa aagtgccaag cgggaagtcg atgctaacat tttgcagatt gttttcttcg
     3841 gcccctgaaa tcgagacctt ttgcccctta tgaccggggc ggcgttcctg aggtatctcg
     3901 atctgccgga agcctgtgag atattggcca gtcaggctct cgctcgattt cataatgtcg
     3961 tcgggtgagc cgatggcgat gatcttgcca ccatggatgc ctgctccggg gccaatatcg
     4021 accaggtaat ccgctgcccg catggcgtct tcgtcatgtt caacgacgat caccgtgtta
     4081 ccgagatcac gcagccgttt cagggtatcg agcagtcgat tattgtcccg ctgatgtagt
     4141 ccaatcgacg gttcgtccaa cacatagagc acaccggtga ggccggagcc gatctgcgag
     4201 gcgagacgga tgcgttgact ttcaccgccg gacaatgtgc gtgatgaccg agccagggtt
     4261 agatattcga ggccaacatt gttgaggaaa ccgagccgct cattaatctc ccgcaaaata
     4321 cgccgggcga tctcattttg ctttttgctg agatttttgt gcaagccggc aaaccacgac
     4381 tcggcatcgc taatcgataa ccgagtgatt tcgctgatat gtttaccgcc gattttgacg
     4441 gcaagggctt ccggtttaag acgatagcct tcacaaacat cacaggtcgt tacggtctga
     4501 tacttcgcta ggtcctccct tatccaggac gaatcggttt cccgccagcg ccgctccata
     4561 ttgggcacca ccccttcaaa cggcttttta atctcatatt cctgtttgcc gtcatcatag
     4621 gcgagcggta cgattttgct gcccgaacca tagagaataa tctcgcgttg cttttttttg
     4681 agcttgcgcc agggcgtggt gagatcaaat ttgaaatgtt tggccaggct ggccaacgtc
     4741 tggtggtaat attgcgagct cgaattagcc cagaaagcaa tggcattctc ggacaatgcc
     4801 agccggtcgt cgggaacgat caattccgga tcaaaataca tttgagtgcc gaggccgtca
     4861 cagaacgggc aggcaccaaa cggattattg aaggaaaata accggggctc gatctcatcg
     4921 atagtaaagc cactttcagg gcaggcgaat ttggctgaaa aggttgcccg ctcgccggtg
     4981 tcggcgtctt cgataaaggc cagaccatca gccagatata acgccgtctc aaaactatcg
     5041 gcgaggcgct gggcgatgtc gtcccggatc accaggcggt cgatgacaac ttcaatatca
     5101 tgcttgaaat tcttttcgag agagggggtt tcttcgatct cataatgctc gccatcaatt
     5161 ttaacccgct gatagccttt cttggctagc tcctgcagct ctttgcggta ttcgcctttg
     5221 cgcccccggg caataggcgc cagtaaatag aggcgggtgc cttctttcat ctccaacacc
     5281 cggtcaacca tctgcgacac cgtctgggct tcgatgggca ggccggtggc gggcgagtag
     5341 ggaatgccaa tgcgggcgaa cattagccgc atataatcgt agatttcggt caccgtgccg
     5401 acggttgagc gcggattgcg gctggaggtt ttttgctcaa tcgagatcgc cggtgacagg
     5461 ccttcgatgg aatcgacatc cggtttctgc atcagttcga gaaattggcg ggcataagcg
     5521 ctgaggcttt cgacataacg gcgctggcct tcggcataaa tcgtatcaaa ggcgagcgac
     5581 gacttgcccg agcccgacag acctgtgatt atagtcaagg agttgcgcgg gatcgagaca
     5641 tcaacattct ttaaattgtg ctcgcgggca ccggtgattt taatctctgc catacccaga
     5701 tatatggacc gtgaactcag aaaaagcgag tccggatatt atttgacgcc agccgtttcg
     5761 aattatgcgc caaaatgc
//
LOCUS       DASCNL010000137         1335 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000317737, whole genome shotgun sequence.
ACCESSION   DASCNL010000137 DASCNL010000000
VERSION     DASCNL010000137.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000317737"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(73..>1335)
                     /locus_tag="QF359_01770"
     CDS             complement(73..>1335)
                     /locus_tag="QF359_01770"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85667.1"
                     /translation="EAVAYFFPAKIREFDYRDMAENVRAECPSLKHLFVLGEAWEGQQ
                     SFSDFLSGTAPSSSIEPVPAAEVAIMLLSGGTTALPKLIPRTHNDYLFNYLQSGITGG
                     LSDGVTLMAVLPMAHNYTLSSPGFFGTLAYGGRVVIAPAHDPETIFSLVEQEKVNVIP
                     AAIPLIVNWLNSDIPELFDLSSLNIITNGGAKLQPELRQQLEQKFSCTFQEIYGTAEG
                     LLNFTPLDGSDDIRYNSSGKPLSVDDEIKVIDDDGNELAEGELGELVVRGPYTIHGYY
                     NAPENNASGFTAGGFYKMGDLVRLIDGYLYCEGRSKDLINRGGEKISCDEVEKHMLAN
                     PKIKSASLVAMSDPVFGEKACAFVILQPGHSMDLEDLKTYLLAQKIAKFKLPERLEIT
                     DSFPISPAGKILKKELRQIISDKLDAEM"
BASE COUNT          317 a          323 c          341 g          354 t
ORIGIN      
        1 cctatgatgt gacttttata tttgcgttcc gggcgtttcg gcctgacggt aaatttcatc
       61 tcaattaatt tattacattt cagcgtctaa cttgtcggat atgatctggc gcagttcttt
      121 cttgaggatt ttgccggccg ggctgatcgg aaagctgtcc gttatttcca atcgttcagg
      181 caatttgaac ttggcgattt tctgcgccaa tagataggtc tttaaatctt ccagatccat
      241 gctgtgaccg ggctggagaa ttacaaaggc acaagctttt tcaccaaata ccgggtccga
      301 catggcgacc aggctggcgc ttttgatctt tgggttagcg agcatgtgtt tttcaacctc
      361 atcacagctg attttctcac ctccgcggtt gatcaaatcc ttgctgcggc cttcgcaata
      421 aagatagccg tctattaggc gcaccagatc acccattttg taaaagccgc cagcagtaaa
      481 tccgctcgcg ttattttccg gcgcattgta gtagccgtga atggtgtaag ggcctctcac
      541 aaccagctca ccaagttcgc cctcggccaa ctcattgccg tcgtcatcga tgacttttat
      601 ttcgtcatcg acggataaag gtttgccgga actgttgtac cgaatgtcgt cggacccatc
      661 gagtggcgtg aaattcaaca aaccttcggc ggtgccgtaa atttcctgga aggtacaaga
      721 gaatttctgc tcaagttgtt ggcggagttc cggttgtagt ttggcgccgc cattggtgat
      781 gatgttgagt gaagataggt cgaagagttc ggggatgtca gaattgagcc aattgacaat
      841 cagtggtatg gctgccggaa taacatttac tttttcctgc tcgaccaagc tgaatatggt
      901 ttctggatca tgcgccgggg cgatgacgac gcggccgcca taagcgagcg tgccaaagaa
      961 gcccggacta ctcagcgtat aattatgagc catcggcaag acagccatta aagtcacacc
     1021 atccgacaag ccgccggtta tacccgattg tagataatta aacagatagt cgttgtgggt
     1081 ccgggggatg agcttcggta aggccgtggt gccacccgat agcaacataa tcgcgacttc
     1141 agcggctggt acaggttcaa tggaactcga tggtgcggtg ccgctcaaaa aatcagagaa
     1201 tgattgctgg ccttcccaag cctcgcccag cacaaaaaga tgtttcaggc ttgggcattc
     1261 agcgcgcaca ttttcagcca tatcacggta atcgaactcg cgaattttgg ccggaaagaa
     1321 ataggcgacg gcctc
//
LOCUS       DASCNL010000138         2252 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000318443, whole genome shotgun sequence.
ACCESSION   DASCNL010000138 DASCNL010000000
VERSION     DASCNL010000138.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000318443"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="QF359_01775"
     CDS             complement(<1..673)
                     /locus_tag="QF359_01775"
                     /inference="COORDINATES: protein motif:HMM:NF025131.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stimulus-sensing domain-containing protein"
                     /protein_id="HJO85668.1"
                     /translation="MSPITRRILAINVLALALLVVGLLFVGQYRQGLIDSELAALNIQ
                     AKLFAAAIGEAAVGNRGSKQHVQAERARQIVRRLSLTTGTYARLILANGKTLTDSRML
                     GGRGGAVQVEELPPPKTDNGVTERISNGFEGLLRHLLRDATDTTDLSVATKIALKGEY
                     GTAIQSQANGMLDLSVAVPVQRYKQVLAALTLTKDSRQIDEAVFQVRLDILKVFGVAL
                     LVTILL"
     gene            complement(790..1506)
                     /locus_tag="QF359_01780"
     CDS             complement(790..1506)
                     /locus_tag="QF359_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJO85669.1"
                     /translation="MSQSIALVDDDRNILTSVSMALEAEGFSVETYVDGADALRGLSQ
                     KPVDLAVLDIKMPRIDGMELLGKIREKSAVPVIFLTSKDDEIDEVLGLRMGADDYIKK
                     PFSQRLLIERIRALLRRRELDTSTGPDGSSEEVIRRGQLIMDPGRHQCSWKGEPVNLT
                     VTEFLLLKSLATRPGHFKNRDQLIDAAYGEHIYVDDRTIDSHVKRLRKKFRAVDNEFS
                     EIETLYGVGYRYQESAAETK"
     gene            1669..>2252
                     /locus_tag="QF359_01785"
     CDS             1669..>2252
                     /locus_tag="QF359_01785"
                     /inference="COORDINATES: protein motif:HMM:NF025252.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HJO85670.1"
                     /translation="MAAPRAKKLYVIQTSRQIIRGASKAFLNTLTNPADVSFAGWPSS
                     SMVTTVAAWDCSPVLMLSDIAYHAQNIQADSRCAILFDGTAGYTRPQEGPRVSVVGRL
                     KKTNDKKLHARFLNRHPGARHYASFGDFNFYKMSVEKFHFVGGFARAVWLNKRKALLT
                     KADWTDIAKSEPGIIEHMNADHADALRLYGNKLLG"
BASE COUNT          569 a          589 c          536 g          558 t
ORIGIN      
        1 acagtaatat tgtcaccaat agcgcaacac caaatacttt cagaatatcg agccgcacct
       61 gaaaaacggc ttcatcgatt tggcgcgaat ctttggtcag cgtcaaagcg gctagcacct
      121 gcttgtagcg ctgaaccgga accgccacac tgagatcaag catgccatta gcttgtgatt
      181 ggatggcggt tccgtactcg cccttcaagg cgatctttgt cgcgacagat agatcagtgg
      241 tatcggtggc atccctcagc aggtggcgca gcaatccttc aaaaccattt gatatccgct
      301 ccgtcacgcc attgtcagtt ttcggtggcg gcaattcttc gacttgaacc gcaccgccac
      361 ggccgccgag catgcggcta tcggtcagcg ttttaccgtt tgccaatatg agccgagcat
      421 aggtccccgt ggtcaaggac agacgccgga caatttggcg cgcacgctca gcttgcacat
      481 gttgtttgga gccccgattg ccgaccgctg cctcaccgat ggcggcagca aatagtttag
      541 cctggatatt gagcgccgcc agttcgctgt cgattaagcc ttggcggtat tggccaacaa
      601 aaagcaaccc gacaaccaat aaggctaggg ccaaaacatt gatcgccaag atacggcggg
      661 taatcggcga cattccggaa cgttttcgat tattggtgtc agctctggta attacctgag
      721 tttttgcttg cgatttttcc cctgattgca aaactgaccc cgtcgtattt aactgctgca
      781 gttaattggt tacttggttt cggccgcact ctcttgatat cgatagccaa cgccatagag
      841 cgtttcaatt tcactaaact cattgtcaac tgcgcggaat tttttccgca aacgtttgac
      901 atgactgtcg atggtccggt catcaacata aatatgctca ccgtaggccg catcaatcaa
      961 ttgatcacgg tttttgaaat ggccgggccg ggttgccagt gatttcaaca gcaagaattc
     1021 agtaactgtc aaattaaccg gctcaccttt ccagctgcat tgatgacggc ccgggtccat
     1081 gatgagctgg ccacggcgaa taacttcttc agatgagccg tcgggaccag tactcgtatc
     1141 caactcgcgg cgccgtaaca gggcgcgaat tcgttcgatc agcaagcgtt gggaaaacgg
     1201 ctttttgata taatcgtcag ctcccatacg aaggcctagc acttcgtcga tctcatcgtc
     1261 tttcgaggtt agaaatatta ccggcacggc gcttttttca cggattttac cgagcaattc
     1321 cataccgtct atccgcggca tcttaatatc gagcacggcc aaatctaccg gcttttgtga
     1381 aagaccgcgc aaggcgtcag cgccatcgac ataggtttcg acgctaaagc cttcggcttc
     1441 aagcgccata gatacggagg ttaagatatt tcgatcatca tcaacgagag caatggattg
     1501 agacactggt acacctttac attttgatgt taaacacaat cccattcaat ttttgaggca
     1561 aaaaaaacat gttatggcct ccgaacaggt ataggctaaa ttgacacagc aattgtgtca
     1621 aaaatatagt tcaaatatgg cgggataaaa tttaggtaaa tattgataat ggccgcacca
     1681 agagcaaaaa aactttatgt aattcaaact tcccggcaga tcatcagagg cgccagcaag
     1741 gcctttctca atactctcac caatccggca gacgtctcat tcgccggctg gccgtcgagc
     1801 tcgatggtaa ccacggtagc ggcctgggat tgctcgccgg tgctgatgct ttcggatatc
     1861 gcctatcatg cgcaaaacat tcaggccgat tcgcgttgtg ccattttgtt tgacggtact
     1921 gcaggctaca cccggcccca ggaaggaccg cgcgtcagtg tcgttgggcg gcttaaaaaa
     1981 accaacgaca aaaaactgca cgcccggttt ttgaaccgcc atcccggcgc ccgccattat
     2041 gccagctttg gcgattttaa tttctataaa atgagcgttg aaaaatttca ttttgtcggt
     2101 ggctttgccc gcgcagtttg gctcaataag cggaaagccc tcctgaccaa agcagattgg
     2161 actgacatag caaaaagcga gccaggcatc atcgaacata tgaacgccga ccatgccgat
     2221 gcccttcggc tctatggcaa taaattgctt gg
//
LOCUS       DASCNL010000139         3786 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000319199, whole genome shotgun sequence.
ACCESSION   DASCNL010000139 DASCNL010000000
VERSION     DASCNL010000139.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3786)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3786)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3786
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000319199"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1786)
                     /locus_tag="QF359_01790"
     CDS             complement(<1..1786)
                     /locus_tag="QF359_01790"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJO85671.1"
                     /translation="MVRYFAAHPTAANLLMIALLLIGALSAPTVKRETFPEIPARDVE
                     IQVFYPGATPEEVEEAICQRIEDAVESIKNIEETRCDARENRGTAIVKMVEGKSFDDF
                     LNDIKTEVESIDNFPDQAEDPIIRKLGQIDFVASVAVTGPMATPDLKAYAEILKDKML
                     ADENISQIKIKGFSDHQIRIEVPAQIMRQYGISVSDIANTIAQQSVNLPAGTIETSAN
                     DVLVRFSDERHNPLEFQDLIVVGAASGAEVRLGTIAKITDLFEKTEDRILFNGRRAAI
                     LDVSKTKTEDTLKVIDAVKAFIQKEKQRAPPGVSFDVTRDISSIVRDRLTLLVKNGAQ
                     GLVLVFLTLWLFFNIRFSFWVAMGFPVSFMGTIAVMSLASLSFDLITMVGLLIAIGLL
                     VDDAIVIAENIAAHMVKGLAPLQAAIEGTKQVAPGVISSFLTTICIFGSLAFIKGNLG
                     SILKMMPIILIVTLSVSLIEAFLILPHHIKASLEKNQDKKPNALRLKLEGGINWARDH
                     ILSNVVNWAINWRYFTAGLAVMIFIASLSMMAGGKLKFRPFPDIEGDVVEARLLLPQG
                     TPLAHTTEVVAQLTAAIGKISAEVAPNQP"
     gene            complement(1786..3156)
                     /locus_tag="QF359_01795"
     CDS             complement(1786..3156)
                     /locus_tag="QF359_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85672.1"
                     /translation="MAFDKKKIMKRLLIIPPILIGVALMAYQVKNRQAPQHEPLQEIA
                     KKVRVISVQKLTVVPRALGFGNVTPGTVWEAVAQVSGKIIEIHPLLKAGAILPKDTVI
                     LKIDPTDYLLAQQSIEADTRAINAQISGLKAREKNTKASLAIEWRSLALNQKDLKRKQ
                     ALLKRRAVSQAAVDQEERTLLARRQSMQSLRNSLNLLPAEAEQLDAQRATLTIKLKDA
                     KLDLARTTIILPFDARIAEVNIELAQFAGQGKTLVVADSIDVSEVSAQLPVDKMAQLL
                     DRSRLKNFSAATASTNIEQILGLKPIVRLRSANLNVSWPGRVVRVSDRLDPRTRTLGV
                     IVAVNNPYNLSADGHRLPLAKNMYVEVELRGIPQKDKIVLPRSALHSGRVYIANKDNR
                     LQIKPVDIAYSQGNLAVLAAGLASGERVVVSDLIPAINGMLLSTVEDTAVQQSLRKAA
                     DGEDRL"
     gene            complement(3159..>3786)
                     /locus_tag="QF359_01800"
     CDS             complement(3159..>3786)
                     /locus_tag="QF359_01800"
                     /inference="COORDINATES: protein motif:HMM:NF020771.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CerR family C-terminal domain-containing
                     protein"
                     /protein_id="HJO85673.1"
                     /translation="RLFSIHGYESVSTRQLTRDSGANIAAINYHFGGKEGLYRAVLEQ
                     LVHDTEPYFGPGLQKIQDSILTTTKDRKKLVPVITGLVNNLFHFFLQDDFMRWRAPLV
                     MREYANPSGNFDILYKGRIEPLHRTITAIAAAVLQKPIDDEECVIRAHAILGQIVVFG
                     IARVVLWKRLNWDGYSPERVATIAEIATQSLLNSLELSSSKSSPDEGN"
BASE COUNT          927 a          909 c         1003 g          947 t
ORIGIN      
        1 cgggttgatt aggcgcgact tcagcactga ttttaccgat tgccgcggtg agttgggcca
       61 ccacttcggt tgtgtgtgcg agcggtgtgc cttggggcag cagcaagcgc gcctcgacga
      121 catcgccttc gatatccggg aaggggcgaa acttaagctt accgccggcc atcatactga
      181 gcgaagcaat aaagatcatc actgcgagac cggccgtaaa atagcgccaa ttgattgccc
      241 aattcacaac attggacaaa atgtggtcgc gggcccaatt gatgccacct tcgagcttga
      301 ggcgcagcgc gttcggtttc ttgtcctggt ttttctccag cgaagccttg atgtggtggg
      361 gcaggatgag aaacgcttcg atcaggctga cactcaacgt aacgatcaaa attatcggca
      421 tcattttcaa aatggagcca agatttcctt taatgaaggc gagggagccg aagatacaga
      481 tggtggttaa aaatgacgag ataacccccg gggcaacttg cttggtacct tcgatggcag
      541 cttgcagggg agcgagacct ttaaccatgt gggcagcaat attttcagcg atgacgatgg
      601 catcgtcgac taacaatcca atcgcgatta acaagccaac catggtgatc agatcgaagg
      661 acagactagc cagcgacatg acagcaatag tgcccatgaa ggaaaccggg aagcccatcg
      721 ccacccaaaa cgagaaacga atgttgaaaa ataaccacag tgtcaaaaag accagaacca
      781 gtccttgggc gccatttttt accaggaggg ttaagcggtc tcggacgatt gatgaaatgt
      841 cacgagtcac atcaaaagaa actccgggtg gggcacgttg tttttctttt tgaataaagg
      901 ctttaactgc atcaataact ttcaacgtat cttcagtttt agttttggaa acgtccaaga
      961 tcgcagcgcg tctgccgttg aagaggatgc ggtcttcggt tttctcaaat agatcggtta
     1021 ttttggcgat ggtgccgagc cgcacttccg ccccagaggc tgcgccgaca acgataaggt
     1081 cttgaaattc taatggatta tggcgctcat ctgaaaaccg gaccagcaca tcgttggcgc
     1141 tggtttcaat ggtgccagcg ggtaaattga cactttgctg ggcgatggta ttggcaatat
     1201 ccgatacgct gatgccgtat tgacgcatga tttgggccgg cacttcgatg cggatttgat
     1261 gatctgaaaa tcctttgatc ttaatctgcg agatattttc atccgccagc atcttgtctt
     1321 tgaggatttc ggcgtaggcc ttgagatcag gtgtcgccat cggaccagtt acagcgacgg
     1381 aggcgacgaa atcgatctgg ccgagtttac gaatgattgg gtcttcggcc tggtcaggaa
     1441 aattatcaat cgattccact tcggttttga tgtcgttgag aaaatcatcg aaacttttac
     1501 cctcgaccat ttttactatc gcagtgccgc gattctcccg ggcgtcacag cgggtttctt
     1561 cgatattttt gatgctttca acggcatcct caatgcgctg gcagatcgcc tcttcgactt
     1621 cctcaggggt tgcaccagga tagaagactt gaatttcaac gtcgcgagca gggatttctg
     1681 gaaaagtttc acgtttaacc gtcggtgctg acaaagcacc aatcagcagc aaggcgatca
     1741 tcaacagatt ggcggcggtg gggtgagcgg cgaaatagcg aaccattaca aacgatcctc
     1801 cccatcagca gctttccgaa gcgattgttg aacggcagtg tcctcaactg tgcttaacaa
     1861 catgccgtta attgctggaa taagatcact gaccacgacg cgttcgccgc ttgccagccc
     1921 ggctgccagc acggccaaat taccttggct gtaagcgata tcgactggct taatctgtag
     1981 acgattgtct ttgttggcaa tataaacacg gccactatgg agagctgagc gtggcaatac
     2041 gattttgtcc ttctgcggta tgccccgaag ttcaacctcg acatacatgt ttttcgccaa
     2101 cggtagacgg tggccgtcgg ctgacaaatt ataaggattg ttgaccgcca cgataacacc
     2161 gagggttcgc gtgcgcggat ccaaacggtc acttacgcgg acaacacgtc cgggccagga
     2221 aacattgaga ttggcgctgc gcagccgtac aatcggtttg agacccagaa tttgctcaat
     2281 attagttgag gccgtagctg ccgaaaaatt cttcagccgc gagcgatcca gcagctgcgc
     2341 cattttatca accggtagct gagccgaaac ttcagagaca tcgatactgt cggcaacaac
     2401 aagtgttttt ccctggccgg caaattgggc cagttcgata ttgacttctg caatgcgggc
     2461 gtcaaagggc aggatgatgg ttgtccgcgc caaatccagt ttggcatcct tgagcttgat
     2521 ggtcaaagtt gcgcgttggg cgtctagttg ctcagcttcg gcgggcaaga gatttaagct
     2581 gtttctgaga ctttgcatgc tttgacgacg ggcaaggagg gtgcgttctt cctggtcgac
     2641 ggccgcctga ctgacggcgc gccgtttcag caatgcctgc ttgcgtttga ggtctttttg
     2701 gttgagggca aggctgcgcc actcaatggc aagcgaggct ttggtgtttt tctcgcgtgc
     2761 ttttagccct gaaatctggg cgttaatcgc gcgggtgtca gcttcaatac tttgctgggc
     2821 aagcaaatag tcggttggat caatttttaa gatgacggta tctttgggca gaatggcgcc
     2881 agctttcagc agcgggtgga tttcaataat tttaccggaa acttgggcaa ccgcttccca
     2941 aacagtaccc ggagttacgt tgccgaagcc aagtgcgcgt ggcacgactg ttagtttctg
     3001 aaccgagatc acgcgcactt tcttggcgat ttcttgaagc ggctcgtgct gaggtgcctg
     3061 gcgatttttg acttgatacg ccatcagcgc cacgccgatc aggatcggcg ggatgatcaa
     3121 aaggcgtttc ataatcttct ttttgtcaaa agccataact aatttccttc atcaggtgag
     3181 ctctttgacg agctgagttc aagggaattt aataaagatt gcgtggcaat ttcggcaatc
     3241 gtggcgacac gctcaggcga gtagccatcc caattgagac gtttccataa gaccacgcgg
     3301 gcgataccaa acacgacgat ttgacccaat atggcatggg ctcgaattac acattcctca
     3361 tcgtctattg gtttttgcaa aactgctgca gcgatggcgg tgatggtccg atgaagcggc
     3421 tcgatacgcc ccttatacaa gatatcgaaa ttaccggagg ggttagcgta ttctcgcata
     3481 accagcggag cccgccagcg cataaaatca tcttggagaa agaagtggaa gaggttgtta
     3541 actaagccgg taatcactgg cacaagtttt ttcctatcct tggtggtagt taatatacta
     3601 tcctgaattt tttggagccc agggccaaaa tagggctcag tatcgtgaac cagttgttca
     3661 agcaccgccc ggtataggcc ttccttgcca ccaaagtgat aattgatggc cgcaatatta
     3721 gcaccggaat ccctggtcag ttgacgggtc gaaacactct catagccatg aatggaaaaa
     3781 agcctc
//
LOCUS       DASCNL010000140         2546 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000320137, whole genome shotgun sequence.
ACCESSION   DASCNL010000140 DASCNL010000000
VERSION     DASCNL010000140.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000320137"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            10..897
                     /locus_tag="QF359_01805"
     CDS             10..897
                     /locus_tag="QF359_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HJO85674.1"
                     /translation="MPGPHHPESPERLKSVWAALSRAKFDGLKKIEAPEASPEIIALM
                     HEPNYVSKIFAVVPERDYAQLDPDTILSPGSGEAALHAVGGICQAVDEVISGDANNAF
                     CALRPPGHHAERAQAMGFCLFNNIAIAAKHAQVNHGLDKVAVIDFDVHHGNGTQHMFD
                     ADASLFYGSSHQYPAYPGTGAASETGVGNIVNVPLSPGSGSEPFRAAYTDVILPALRE
                     FNPDLLLISAGFDAHIQDPLCQLNVTTEDFAWVTKELLVVAGDCCDGRLVSTLEGGYD
                     LDALAESVAVHVSAMVVFR"
     gene            1023..1298
                     /locus_tag="QF359_01810"
     CDS             1023..1298
                     /locus_tag="QF359_01810"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HJO85675.1"
                     /translation="MAADKAEEKAESKIPADIKKMSFEDALAELEEIVGDLEQGANKL
                     DDAIGAYERGTLLKKHCEAKLHEAKARIEKISVGPDGDAAAEPVEIS"
     gene            1311..2198
                     /locus_tag="QF359_01815"
     CDS             1311..2198
                     /locus_tag="QF359_01815"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HJO85676.1"
                     /translation="MNDFTDALADAAAATETALLKLIPSGSGPEAQVVEAMRYSVMAG
                     GKRLRPFLVLACADLFNVSRSCSERVAAAFEMVHTYSLIHDDLPAMDNDNLRRGKLTC
                     HLEFDEATAILAGDALLTLAFEVLSDLDTHDSAKVRSDLVLEVARAVGAHGMVGGQML
                     DLVAEDHTLGVSEITRLQRMKTGALINCSCQAGAILGKSSDTQRHLLSAYAHDIGLAF
                     QITDDLLDIEGDVEELGKEIKKDEAAGKATFVSLLGVERAREQAKILTDQAIKHLEIF
                     GKSGNLLCDLAQFVIDRRN"
     gene            2264..>2546
                     /locus_tag="QF359_01820"
     CDS             2264..>2546
                     /locus_tag="QF359_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HJO85677.1"
                     /translation="MTKNSKTPLLDTIAEPSDIRGYSPDQLKQLADEVRTETIDAVSI
                     TGGHLGASLGVVELAVTLHHVFDTPHDRLIWDVSHQAYPHKILTGRRDRI"
BASE COUNT          629 a          587 c          699 g          631 t
ORIGIN      
        1 cttactcacg tgccgggacc gcatcaccct gaatcaccag agcgcctgaa atcagtttgg
       61 gcagccttat cacgggcaaa gtttgatggg ctcaagaaaa tcgaggcgcc agaggcgtcg
      121 cctgaaatca ttgccttgat gcatgagcca aactatgtct cgaaaatatt tgccgtcgtg
      181 ccagagcgcg actatgccca gctggatcct gatacgattt tgtcaccggg ttcaggtgag
      241 gcagctttgc atgcagtcgg cggtatctgc caggcagttg atgaggtgat tagcggcgat
      301 gctaacaatg ctttttgtgc gctgcgccct cccggacatc acgccgagcg cgctcaggcc
      361 atgggattct gtctgtttaa caatatcgcc atcgccgcca aacatgcgca ggtaaaccac
      421 ggcttagata aagttgcggt gatcgacttc gatgttcatc atggcaacgg cacccaacac
      481 atgtttgatg ccgatgcgag tttgttttat ggctctagcc atcaatatcc agcctatccc
      541 gggaccgggg cggcgtctga aaccggggtc ggcaatatcg tcaatgtacc gctcagcccg
      601 ggcagcggct cggaaccgtt ccgcgccgcc tatactgatg ttattttgcc ggcgcttaga
      661 gaattcaatc ctgatctact actaatatcg gccggcttcg atgcccatat tcaagacccg
      721 ttgtgtcagc tcaacgtcac caccgaagat tttgcctggg tgacaaagga actgttggtg
      781 gttgctggtg attgctgcga tggccgcctc gtttcaaccc tagaaggcgg gtatgatctg
      841 gacgccctcg ccgaaagcgt tgcggttcat gtcagtgcga tggtggtatt tcggtgatag
      901 tttacttttc gaattaagta aactatcacc gaaataggag tatttcgttt gccgaatggg
      961 ggaacggaag cgtacactcc gcggcaaaat taaatgcacg atattggtac aggggttggg
     1021 aaatggctgc agataaagcc gaagaaaaag ctgaaagtaa aattccggca gatatcaaga
     1081 aaatgagttt tgaagatgcg ctggctgagc tcgaagaaat tgtaggcgat cttgagcagg
     1141 gtgccaataa actcgatgac gcaattggcg cctatgaacg gggcactttg ctgaaaaagc
     1201 attgcgaagc caagttgcat gaagccaagg cgcggataga gaaaatttcg gttggaccgg
     1261 acggtgacgc cgcggcggaa ccggttgaaa tttcatagag gcaacgttta ttgaacgatt
     1321 ttacagatgc cttggccgat gcggccgccg caactgaaac agcgctgtta aaactaattc
     1381 cctccggcag tggtcccgaa gcgcaagttg ttgaggcgat gcgctattcc gtgatggctg
     1441 gcggcaagcg gttgcggcct tttctggtgt tggcttgtgc cgatcttttt aatgtttcac
     1501 gttcttgttc tgagcgcgtc gcggcggcgt ttgaaatggt gcatacttat tcgctgatcc
     1561 atgatgattt accggcaatg gataacgaca atctcaggcg cggcaagctg acttgtcacc
     1621 tggaattcga tgaagcaacg gcaatcttgg cgggtgatgc cctgctgaca ttggcatttg
     1681 aagtgttgag cgatttggat acccacgatt cagctaaagt gcgtagtgat ctggtgcttg
     1741 aggttgcccg cgccgtcggt gcgcatggca tggtgggggg gcagatgctc gacctcgtcg
     1801 ccgaagatca taccttgggc gtttctgaaa ttacccggtt gcagcgtatg aaaacagggg
     1861 cgctgataaa ttgttcttgc caagccggtg caatattagg caaatcaagt gatactcaac
     1921 gccatttatt gagcgcctac gcccacgata ttggcctcgc ttttcaaatt accgacgatc
     1981 ttttggacat tgaaggcgat gttgaagagc tgggcaaaga gataaaaaag gatgaagctg
     2041 ctggaaaagc gacatttgtt tcactattag gcgtcgaacg cgcccgcgag caggccaaaa
     2101 tattaaccga tcaagcgata aaacatcttg agattttcgg caaatcaggc aatcttctct
     2161 gtgatttagc gcaatttgta atagatcgcc gcaattaaca tattataatt ggataatacg
     2221 aattataaag aatacctggg tgtcgccagg aaaaggatga agtgtgacga aaaatagtaa
     2281 aacgccgtta ctggatacga tagcggagcc gtcggatatt cgtggctatt cacctgatca
     2341 gcttaaacaa ttggctgatg aggtgcgaac ggaaaccatt gacgctgttt cgattaccgg
     2401 tggccatctt ggcgccagct tgggtgtcgt cgagctcgcc gtaacgctgc accatgtttt
     2461 tgatacacca catgatcgct tgatctggga tgtcagtcat caagcttatc cgcataaaat
     2521 attgaccgga cgacgcgatc gtattc
//
LOCUS       DASCNL010000141         3947 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000321957, whole genome shotgun sequence.
ACCESSION   DASCNL010000141 DASCNL010000000
VERSION     DASCNL010000141.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3947)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3947)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3947
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000321957"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            487..597
                     /locus_tag="QF359_01825"
                     /pseudo
     CDS             487..597
                     /locus_tag="QF359_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038789.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(700..1740)
                     /gene="rmuC"
                     /locus_tag="QF359_01830"
     CDS             complement(700..1740)
                     /gene="rmuC"
                     /locus_tag="QF359_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HJO85678.1"
                     /translation="MILLLLKGDRSRTEMNQTLAQFSQLSERFGQAQAEISGRMEQSQ
                     TAVNDRLEALSKRLGDGLTQQTEKTGATLKQLHERLAVIDTAQQNITGLSEQMVGLQD
                     ILSNKQARGAFGEIQLNDLVTSILPPSAFEFQVTLSNNKRADCVLDLPNPPGPIVIDS
                     KFPLEAYHALRDAEEEADQKVALRALGAAILKHILDIKEKYIIPGETAESALMFLPSE
                     AIYAELHASLPEIVEKSYRSKVWIVSPTTLMATLNTVRAVLKDVHMREQASVIQAEVQ
                     FMLEDVKRLDDRVAKLHTHMRQADKDLNDIGTSTGKITKRGEHITEIEMGEKIGSDDI
                     ASSASPQQIAEN"
     gene            1953..2489
                     /gene="def"
                     /locus_tag="QF359_01835"
     CDS             1953..2489
                     /gene="def"
                     /locus_tag="QF359_01835"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HJO85679.1"
                     /translation="MAFLPIIVAPDPRLKLTCDPVIDVTDELRQLMDDMLDTMYDAPG
                     IGLAAPQVGVTKRVIVVDVTKNDDERHPYQMVNPKITWRSEELLDYEEGCLSLPEQYA
                     QVSRPEKICIKYLDFDGNAQEIETSGILATCIQHEMDHLDGVLFVDHISKLRRDLIIR
                     KLKKYKAQLSSKKVGVRG"
     gene            2510..3436
                     /gene="fmt"
                     /locus_tag="QF359_01840"
     CDS             2510..3436
                     /gene="fmt"
                     /locus_tag="QF359_01840"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HJO85680.1"
                     /translation="MAEKLRLAFMGTPDFSVPVLAALIDAGHEVVCVYSQSPRAAGRG
                     QKQKPSSVHAKAEELGIDVHTPKSLKSEVEQAVFIALELDCAVVAAYGLILPREILAA
                     PRLGCLNIHASLLPRWRGAAPIQRAILAGDEVSGVTIMQMDEGLDTGDMLLSKQVPIN
                     SKTTGESLHDALSEMGADLIIGALASLAAGTLTALPQPAEGVTYAGKLERQEGHIDWN
                     KSALELERQVRAFTPWPGSWFEFADERIKIISAETADGTDKPGTVLDDHLTISCGEGA
                     LRLVKIQRAGKGPMAVLDFLRGFDLPVGSRLF"
     gene            3436..>3947
                     /locus_tag="QF359_01845"
     CDS             3436..>3947
                     /locus_tag="QF359_01845"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine synthase A"
                     /protein_id="HJO85681.1"
                     /translation="MQRYKLIIEYDGSGFVGWQRQKNGLGVQQCMEEAIANFCGEDVT
                     VFAAGRTDTGVHALGQVAHFDVEKHTTADKVRDALNHHLKDVAISVLLAEAVDEKFHA
                     RFSARQRAYVYRIIARRSPLTIDSGLAWWVPVKLDAGAMHEAAQLLVGKHDFSTFRAA
                     NCQSDSRVKT"
BASE COUNT          989 a          894 c         1018 g         1046 t
ORIGIN      
        1 cgtgcgtatg gatgtttgcc tggtcgatag tgcacccttt aaagtgaaat cggaaaaaga
       61 tttggatttt gtacgagaag agctcgatac gacgctttaa gagtttactc catcaattcg
      121 agatctcgaa gggccgaaag gtagtcggga tcgcgtgtcc agcgttgaat tatatgttcc
      181 cctgaatctt gcgtagccga ggagtaaaac ttcaagatat ctcttatttt ggctgagaaa
      241 tccttgaccg atttctgtat agcgcttcag ttataggcaa atatatcgga aaaattagat
      301 tttgatatac taattccctt gtaagtgatg gcgaaatctt ctccgcccgg ttcaaaaaaa
      361 atccgtttga ctaattgttc gcgtaagcca ttcatccagg tgaaaagcga gatgaataag
      421 ctaacctcgc cagcgcgtaa agactgaacc tgtctcaaca tcgacgatac cttcctcgac
      481 aagctcatgc gcaagtttaa tggtgttccc agacagcatt ttgggctatt tttaaaagaa
      541 tgtgagtggc gatttaacaa ccccaaaccg caagctcaat taagacaaat aaaatagtgg
      601 gttaaactat atttgaacta gttagctgga tcagcccctt tatttattaa tgtaatacgt
      661 gttttcttta atgtgatacg gaaatttgcc cggggcaggt taattttcag ctatttgctg
      721 cggtgaagcc gaagacgcga tatcgtcgga gccaattttc tcacccattt cgatctcggt
      781 gatgtgttcg ccgcgcttgg tgattttccc cgtcgaagtg ccgatatcgt tcaaatcttt
      841 atcagcctgc ctcatatgag tatgcagctt agcgacacgg tcatcaaggc gtttaacatc
      901 ttcaagcatg aattggactt cggcctgaat aacgctagct tgctcgcgca tatggacgtc
      961 tttgaggacc gcgcgcactg tattaagggt tgccatcagc gtggtaggcg agacgatcca
     1021 tactttagag cggtaagatt tttcaacaat ttccggcaaa ctagcatgaa gttcggcata
     1081 aattgcttca gagggcagga acatcaaggc tgattccgca gtttcgcccg gaataatata
     1141 tttttctttg atgtccaata tatgtttgag aatggcggca cccaaggcac gcagggcaac
     1201 tttctgatcg gcttcttcct cagcatcgcg gagggcatga taagcctcaa gcggaaactt
     1261 tgaatcgata acgatcggcc ccgggggatt aggcaaatca agtacacaat cagcgcgctt
     1321 gttattgctc agcgtcacct gaaattcaaa tgctgagggc ggtaggattg aagttaccag
     1381 atcattgagc tggatttcac caaaggcgcc acgcgcttgt ttattggaaa gaatatcctg
     1441 caacccaacc atttgttcgg aaagcccagt gatgttttgc tgggcggtat caatgacggc
     1501 gagccgctcg tgcaattgtt ttagggtcgc tccggttttt tccgtttgct gagtgaggcc
     1561 atcgccaagg cgtttggaca gcgcctccaa ccggtcatta acggcggttt ggctctgctc
     1621 catacgaccg ctgatttcag cttgagcctg gccaaagcgt tccgacaatt ggctaaattg
     1681 ggcaagcgtc tggttcattt cggtgcggct gcgatcacct ttgagtagga gcagtatcat
     1741 cacgcccaat accaaaactg ctaaaattat taatattaca tttatgtcca taatattttg
     1801 aaaggcccct tatgtaacct cgaatctagc ctgagtgccg cctaaatagc aatcgcctaa
     1861 cactggtctt ttcagatatc ttgagcaaat cttgactgag cagcctgcgt gtcctatttc
     1921 caaccgggaa aacaaggata tatacacaaa acatggcatt tttaccaatt atcgtcgcac
     1981 ctgatccgcg ccttaaactg acctgcgatc ctgtcataga tgtgacggac gagttgcggc
     2041 agttgatgga tgatatgctg gatacgatgt acgacgcgcc cggcattggc ctggcggcgc
     2101 cacaagtcgg tgtaaccaag cgggtaatcg tggttgatgt gactaaaaat gacgacgagc
     2161 gccaccccta tcagatggtc aacccaaaaa taacttggcg ttcggaagaa ctgttggatt
     2221 atgaggaggg ctgtctttcc ttgccggagc aatatgcgca agtgagccgg cccgaaaaaa
     2281 tctgcattaa atatttggat tttgatggta acgcgcagga gattgaaacc agcggtattt
     2341 tagcgacttg tattcaacat gaaatggatc atctcgacgg ggttttattt gtcgatcata
     2401 tttcgaagct gcgccgagat ctcatcatcc gaaaactaaa aaaatataaa gctcaactgt
     2461 cgtcaaaaaa agttggcgtt cgtggttaat cgccggggtt attgtcacca tggctgagaa
     2521 actgcgcctc gcctttatgg gtacgcccga tttttcggta ccggtgcttg cagccttgat
     2581 tgatgcgggt catgaagttg tttgtgttta ttctcaatct ccccgagccg ccggacgtgg
     2641 tcaaaaacaa aaaccaagtt cggttcatgc caaagctgaa gagcttggca ttgacgtgca
     2701 cacacctaaa agccttaaga gcgaggtgga gcaagctgtt tttatcgccc ttgaactcga
     2761 ttgtgcggtg gtggctgctt acggtttgat tttaccgcgg gaaattttgg cggcaccgcg
     2821 attgggctgc cttaacattc atgcctcctt gttaccgaga tggcgtggcg ccgcgcccat
     2881 tcagcgggcc atcttggcag gtgatgaagt gagcggtgtc accatcatgc agatggatga
     2941 aggtttggat actggcgata tgctgcttag caagcaagta ccgattaaca gtaagacaac
     3001 aggggaaagt ttgcatgatg ccttatcaga aatgggagcg gatttaatca tcggcgcctt
     3061 ggccagcttg gcggcaggta ccttgaccgc gctgccgcaa ccggcggaag gtgtcaccta
     3121 tgccggcaag cttgagcgcc aagaaggaca tattgactgg aacaaatctg ctctcgaact
     3181 tgagcggcaa gtgcgcgcct ttacgccatg gcctgggtcg tggtttgaat ttgccgatga
     3241 gcgtattaaa ataatttcgg ctgaaacggc agacggaaca gataaaccgg gcacggtgct
     3301 ggatgatcat ctgacgattt cctgtgggga gggtgctttg cgattggtaa aaattcaacg
     3361 tgctggcaag ggaccaatgg cggtgcttga ttttttgcgt ggttttgatt tgcccgttgg
     3421 cagcaggctc ttctgatgca gcgttataag cttatcattg aatatgacgg cagcggcttt
     3481 gtcggctggc agcggcaaaa aaatggcctt ggcgtgcagc aatgcatgga agaagcgata
     3541 gcgaattttt gcggcgagga tgtgacagtt tttgctgccg gccgcaccga tacaggagtc
     3601 catgccctgg gacaagttgc ccattttgat gtcgagaaac ataccactgc tgacaaagta
     3661 cgcgatgcgc tcaatcacca tctcaaagat gtcgccatct ccgtactgtt ggctgaagcg
     3721 gttgatgaga aattccacgc ccgcttttca gcccggcaac gggcctatgt ttaccgcatc
     3781 attgcccgcc gttcaccgtt aaccattgat agtggtctgg cctggtgggt gccggtaaaa
     3841 cttgatgctg gggcgatgca tgaggcagcg caactgctag taggtaagca tgatttttcg
     3901 accttccggg cggccaattg tcagtcggac agccgagtaa agacttt
//
LOCUS       DASCNL010000142         1044 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000323108, whole genome shotgun sequence.
ACCESSION   DASCNL010000142 DASCNL010000000
VERSION     DASCNL010000142.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000323108"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            87..>1044
                     /locus_tag="QF359_01850"
     CDS             87..>1044
                     /locus_tag="QF359_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HJO85682.1"
                     /translation="MRKYLQINLIDQSVETEELEGEDAIRVGRHYIAKTLLENGVAKA
                     DPLGPDNPLIFSAGPFAGSNFSNANRISVGCKSPLTGGVKEANSGGTFAFALGQLEIL
                     GFTLNGQSDDWVVIRIPKEGDITFEDASPYVGKGNFEAAKMLFEKYGDKVSLGICSPV
                     GEYGGLMSGISFTDPEGRPVRIAARGGVGAVMGSKKVKAIVLDRNKMPTFYDRKKYMG
                     SVKQYGQMLDEDPTIDAFRKLGTAMVCDFTNKVGGLPTRNFSAGTIVEPDEGPLKLGG
                     QYIRELNLERGGDTTHACMPGCMIQCSNIYADENGEEICSPLE"
BASE COUNT          276 a          239 c          271 g          258 t
ORIGIN      
        1 gatcatacca atcaaataaa acagagtctg gcaatgataa aggcgagctc tttgcaccaa
       61 actttttgac tttaggatga tacgacatgc gcaaatactt gcaaattaac ctgattgacc
      121 aatcagtcga aacggaagag ctcgaaggcg aggatgcgat ccgggttggc cgccactaca
      181 ttgcaaaaac actgctcgaa aatggcgttg cgaaagccga ccctctaggt ccggacaatc
      241 cgttaatatt ttccgctggg ccatttgccg gttctaattt ttccaatgcc aatcgtatca
      301 gcgtcggctg caaaagcccg cttacgggtg gcgtcaagga agcaaattca ggtggcactt
      361 ttgcctttgc gttgggtcag ctggagatat tgggatttac gctgaacggc cagtcagatg
      421 actgggttgt catccgcatt cccaaagaag gtgatatcac atttgaggat gccagcccgt
      481 atgttggcaa gggtaatttt gaagccgcca aaatgctgtt tgaaaaatac ggcgataaag
      541 tcagcctcgg tatttgcagc ccggttggtg aatatggcgg cttgatgtcg ggtatttcct
      601 ttaccgatcc ggaaggccgc ccggtccgca tcgcggcacg cggcggtgtt ggtgccgtca
      661 tgggctcgaa aaaagtcaaa gccatcgtcc ttgatcgtaa caaaatgcca accttttacg
      721 accgtaaaaa atatatgggt tcggtcaagc aatacggcca aatgctcgat gaagatccaa
      781 ccattgatgc tttccgtaaa ttgggcacgg caatggtctg tgattttacc aataaagttg
      841 gtggcttgcc gacccgcaac tttagtgccg gcacgattgt tgaacctgat gaagggccac
      901 taaaactagg cggccagtat atccgcgagt taaatcttga gcgcggtggt gatacgacac
      961 atgcttgtat gccaggctgt atgatccagt gcagtaacat ttacgccgat gaaaatggtg
     1021 aagaaatttg ctcgcccttg gaat
//
LOCUS       DASCNL010000143         5348 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000325245, whole genome shotgun sequence.
ACCESSION   DASCNL010000143 DASCNL010000000
VERSION     DASCNL010000143.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5348)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5348)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5348
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000325245"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="QF359_01855"
     CDS             <1..201
                     /locus_tag="QF359_01855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HJO85683.1"
                     /translation="VLMGVAGWLVTLSWPFYVGLGLTALHGIWQVWDLKINDPYDCLA
                     KFKSNRLFSWLFLGGIIAGQIL"
     gene            complement(207..668)
                     /locus_tag="QF359_01860"
     CDS             complement(207..668)
                     /locus_tag="QF359_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HJO85684.1"
                     /translation="MLREQLNDTLKEAMKSKDPTTVSTLRLINAAIKDRDIADRTKGG
                     IDEEGISDDDILQLLQSMIKQRHDSIDAYTKGGRNELADQEAQEIEVIERFLPEQLGD
                     EEMTNAVNGVIEAVGAESLKEMGAVMAKLREDFAGQMDFGKASGIVKKRLG"
     gene            940..2121
                     /gene="carA"
                     /locus_tag="QF359_01865"
     CDS             940..2121
                     /gene="carA"
                     /locus_tag="QF359_01865"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HJO85685.1"
                     /translation="MTEAKQSTAPNLGPPKKPDGKDAALILSDGSVFWGKGAGAETSA
                     TGEVCFNTSLTGYQEILTDPSYAGQIITFTFPHIGNVGTNPEDIETITPAVRGCVMGA
                     DITEPSNWRAARHLDEWLKSYNLAAVTGIDTRHLTRRIRDAGFVNATIVNGTVDVEVA
                     KVQASDWPGLEGMDLAKDVTCVQTYSWDESIWSIQDGYGQQSDPKLHVVAMDFGAKRN
                     ILRCLAAAGCKVTVVPASASAEDILAHKPDGVFLSNGPGDPAATGEYAVPVIKVLIEQ
                     NLPIFGICLGHQMLALALGAKTKKMHHGHRGANHPVKDLETSKVEITSQNHGFVVDSD
                     SLPKSVVESHRSLFDGSLEGIRVDGKPVFSVQHHPEASPGPQDSHYLFNRFVAMMGGG
                     E"
     gene            2121..>5348
                     /gene="carB"
                     /locus_tag="QF359_01870"
     CDS             2121..>5348
                     /gene="carB"
                     /locus_tag="QF359_01870"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HJO85686.1"
                     /translation="MPKRTDIKTIMIIGAGPIVIGQACEFDYSGAQACKALKEEGYRV
                     VLVNSNPATIMTDPDTADATYVEPITPEFVEQIISKEKPDAILPTMGGQTGLNAAMAL
                     WKNGALERHNVELIGAKAESIDKAEDRLKFRDAMDKIGLESPKSSLVTNLDEAAVALE
                     EIGLPMIIRPSFTLGGAGGGVAHNKSEFDHIVSTGLAASPVHSVLVEESIIGWKEYEM
                     EVVRDHADNCIIICSIENVDPMGIHTGDSITVAPALTLTDKEYQILRNASIAVLREIG
                     VDTGGSNVQFAINPKDGRLVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDE
                     LDNDITGVTPAAFEPTIDYVVTKIPRFTFEKFPQAEALLTTSMKSVGEAMSIGRNFAE
                     SLQKGLRSMEIDLTGLNEVEIEGAPDRNAIRMALTEPRPNRILYVAQAMRHGVSLEDI
                     FETSKFDPWFLEQIKAIVDVEDGVRANGLPEDKAGLLVLKKMGFSDARLAELAGSDAA
                     SVTAARIKADVRPTYKRVDTCAAEFPSQTSYMYSAYEGDGLNPPETEIDASDKDKVII
                     LGGGPNRIGQGIEFDYCCVHAAYAMRDTGYESIMVNCNPETVSTDYDTSDRLYFEPLT
                     SEDVIELIRAEQVNGKVHGVIVQFGGQTPLKLAAALEAANIPILGTSPDAIDLAEDRE
                     RFQQLLEDLKLKQPPNGIARSAEEAEKIAEEIGYPVVIRPSYVLGGRAMEIVHDVENL
                     RRYIKTAVVVSGDSPVLIDWYLRDAIEVDVDAICDGKDVYVSGIMEHIEEAGIHSGDS
                     ACSLPPYSLPDDIIQELRRQTEALALALNVIGLMNVQYAIQDGMVFVLEVNPRASRTV
                     PFVAKATGVPIAKIAARVMTGEKLASFNLVENLKPSHTAVKEAVFPFARFPGVDIILG
                     PEMKSTGEVMGIDKDFPSAFAKSQLGAGTILPAEGTVFISVKDSDKQAGCQIARDLNG
                     LGFKILATGGTAKFFADKGIDVKRVNKVLQGHPHCVDAILSREVQMIVNTTEGAQAIF
                     DSFSIRSSALTNNVPHYTTMAGAAAAVGAIRMQDAQGANTDKGLEV"
BASE COUNT         1258 a         1426 c         1450 g         1214 t
ORIGIN      
        1 gtattgatgg gcgtcgccgg ctggctggtc acgttaagtt ggccgtttta tgttggactt
       61 ggcctgacgg cgctccatgg catctggcag gtctgggatc ttaagattaa tgacccctat
      121 gattgcctcg ccaagtttaa atcaaaccgg ttgttcagct ggctgttttt aggtgggata
      181 atcgcgggtc aaattttgta attttattaa cctagccgtt ttttaacgat gccactggct
      241 ttgccgaagt ccatttggcc agcgaagtct tcgcgcagct tcgccatcac cgcccccatt
      301 tccttaaggc tttcggcgcc aaccgcttcg atgacgccat tgacggcatt ggtcatttct
      361 tcatcgccca attgttctgg caaaaagcgt tcgatgactt caatctcctg ggcttcctgg
      421 tcagctaatt cattgcgccc gcccttggta taggcgtcga tagaatcgtg gcgctgtttg
      481 atcatcgatt gcaggagctg aagaatatca tcatcgctga taccttcttc atcaataccg
      541 cctttggttc tatcggcgat atcacggtct ttaatcgccg cattgatcag ccgcaaagtt
      601 gaaacggtgg tcgggtcttt ggacttcatg gcctctttga gcgtgtcgtt taattgctcg
      661 cgtagcatcg aatcatcccc tctgattgaa gccctggacc ctaacccaaa ataaatcacc
      721 gagtcaaatc gaattaagtt tataagccat tgaaattaaa taatttattt aatttttttc
      781 acttgaccgt ggcacctaca tcacttatga gatggctcca acctgatgtg aggggtcgga
      841 ccacaaagag ctgcccggcg gatcactagc acgattgaca attaatgcga atcggtcgaa
      901 tgatcgggac gtagcaagat ataaggatcc gccacgacta tgacggaagc caaacagagt
      961 actgcgccaa atttaggtcc tcccaagaaa cccgacggta aggacgcagc gttgattctt
     1021 agtgatggtt cggttttttg gggcaagggt gcgggcgcgg aaacctcggc gaccggtgaa
     1081 gtttgcttta acacctcgct caccggctat caggaaattc tcactgatcc gtcctatgcc
     1141 ggccagatca tcacctttac cttcccccat atcggcaatg tcggcaccaa tccggaagac
     1201 atcgaaacca ttacaccggc ggtgcgcggc tgtgtcatgg gcgccgacat cactgagccc
     1261 tccaattggc gagcggctag gcatctggat gaatggttga agtcgtacaa tttggcggcg
     1321 gttaccggca tcgatactag acatctgacc cggcggatca gagacgccgg cttcgttaat
     1381 gcgacgattg ttaacggtac cgttgatgtt gaggtggcca aagttcaggc tagcgactgg
     1441 cccggtcttg aaggtatgga cctcgccaag gacgtcacct gcgtgcaaac ttactcttgg
     1501 gatgaaagta tttggtcgat ccaggacggc tacggccagc agtctgatcc taaacttcat
     1561 gttgtcgcca tggatttcgg cgccaagcgc aatatcctgc gctgtctcgc ggcggccggc
     1621 tgcaaggtta ccgttgtccc cgcctcggcc agtgctgagg atattttagc ccataagccg
     1681 gatggcgtgt ttttatcgaa cggcccgggg gacccggcag ccaccggtga atacgccgtg
     1741 ccggtaatta aggtcctgat cgaacaaaac ctgccgattt tcggtatttg cctcggccat
     1801 cagatgctgg cactggcctt gggcgctaaa accaaaaaga tgcatcacgg tcaccgcggc
     1861 gccaatcatc cggtcaaaga cctggaaacc tcaaaagtcg agatcaccag ccaaaaccac
     1921 ggttttgttg tcgattcaga cagcctgcca aaaagcgtgg ttgaaagtca tcgctcgctg
     1981 ttcgacggct ctctagaagg tatccgtgtt gacggcaaac cagtcttttc ggtccaacac
     2041 cacccggaag cctcccctgg cccgcaagac agccactacc tatttaatag gtttgtggcg
     2101 atgatggggg ggggtgagtg atgcctaagc ggactgacat aaaaaccatc atgatcatcg
     2161 gggcggggcc gattgtcatc ggccaggcgt gcgagtttga ttactcaggc gcacaggctt
     2221 gtaaggcgct gaaggaagaa ggctaccggg ttgttttggt caactcgaac ccggcgacga
     2281 tcatgaccga tccggatacg gcggatgcga cctatgtcga gccgatcacg ccggaattcg
     2341 tcgagcagat tatatctaag gaaaaaccgg atgccattct gccgaccatg ggcggccaga
     2401 cgggtttgaa cgcagcgatg gcgctttgga aaaacggtgc gcttgaacgt cacaatgttg
     2461 agctgatcgg cgccaaggcg gaaagtatag ataaagccga agaccggctc aaattcagag
     2521 acgcgatgga caaaatcggc ctcgaaagcc caaagtcgtc gctggtgacc aatctcgatg
     2581 aagcagcggt ggcgctagaa gagatcggtc tgccgatgat catccggccg agctttaccc
     2641 ttggtggcgc gggtggcggg gtcgcccata acaaatccga atttgaccat attgtctcga
     2701 ccggcctggc cgcctcgccg gttcattccg tgctggtcga ggaatcgatc atcggctgga
     2761 aagaatatga gatggaggtc gtccgcgatc atgcggataa ctgcattatt atttgctcga
     2821 ttgaaaacgt cgatccgatg ggcatccata ccggcgattc gatcaccgtc gccccagcgc
     2881 tgacgctgac tgataaagaa tatcaaatcc tcagaaacgc ctcaattgcg gtcttgcgtg
     2941 agatcggcgt tgatacaggc ggctccaatg tccagttcgc cataaatcca aaagatggcc
     3001 ggctggtgat aatcgagatg aatcctcggg tctcccggtc ttcggcgctc gcctccaagg
     3061 caaccggctt cccgattgcc aagatcgccg ccaaactcgc cgtcggctat acactggatg
     3121 agctcgataa tgacatcacc ggcgtcacgc ccgcagcctt tgagccgacc atcgattatg
     3181 tggtgaccaa aattccgcgc tttacctttg agaaattccc gcaagccgaa gccctgctga
     3241 cgacctcaat gaaatcggtc ggtgaagcga tgtcgattgg ccggaatttt gccgaaagct
     3301 tacaaaaagg tctgcgttca atggagatcg acctgacagg tctgaacgag gttgaaatcg
     3361 aaggcgcgcc cgaccggaat gcgatacgca tggccctgac cgagccccgg cccaatcgta
     3421 tattgtatgt cgcgcaagcg atgcgccacg gggtcagtct cgaagacatc tttgagacat
     3481 ccaaattcga tccatggttc ctggaacaga ttaaagccat cgtcgacgta gaggacggcg
     3541 ttcgtgccaa cggcctgccg gaggacaagg cgggtctatt ggtgcttaag aaaatggggt
     3601 tctcggacgc cagactggcc gagttggccg gtagcgatgc ggccagtgtt acggcagcgc
     3661 ggatcaaagc cgatgtgcgg ccaacctata aacgggttga tacctgcgcc gctgaattcc
     3721 cctcgcaaac ctcctatatg tattcggcct atgaaggcga cggtctcaat ccgccggaaa
     3781 ccgaaattga cgcctccgat aaagacaaag tcattatctt gggcggcggg ccgaaccgga
     3841 tcggccaagg cattgagttc gattattgct gcgttcatgc cgcctatgcc atgcgggata
     3901 cagggtatga gtccatcatg gtcaattgta atccggaaac cgtctcgacc gattacgata
     3961 cctcggaccg gctttatttt gagccgctca cctcagagga tgtcattgaa ctgatccggg
     4021 ccgaacaagt caacggtaag gttcacggcg taattgttca gtttggcggc cagacaccgc
     4081 tgaaactggc ggcagcgcta gaagcggcca acattccgat cctcggcacg tcgcccgacg
     4141 cgatcgatct tgccgaagac cgcgaacgct ttcaacaatt gctcgaagac ctcaagctta
     4201 aacagccacc aaacggtatt gcgcgctcag ccgaagaagc cgaaaaaatc gctgaagaaa
     4261 ttggctatcc ggtggtgatc cgcccgagct acgtattagg cggacgggcg atggaaatcg
     4321 ttcatgatgt tgaaaacctg cgccgctaca taaaaactgc tgtggtcgtg tcgggtgaca
     4381 gcccggtgct gatcgattgg tatctacgcg acgccatcga ggttgatgtt gatgccatct
     4441 gcgacggcaa ggatgtttat gtttccggca ttatggagca catcgaagaa gccggcattc
     4501 actccggtga cagtgcctgc tccctaccgc cctattcgct gccggatgat attattcagg
     4561 aactccgccg ccagaccgaa gcgctggctt tggcgcttaa tgttataggc ctcatgaacg
     4621 tacaatacgc catccaggac ggcatggtgt ttgtccttga agtcaatccg cgggccagcc
     4681 ggacagtgcc gtttgtggcc aaggcgaccg gtgtgccgat tgccaaaatc gccgcccggg
     4741 tgatgactgg tgaaaagctt gccagcttta atttggtaga aaatttaaaa ccctcccata
     4801 cagccgtgaa agaagcggtc ttccccttcg cgcgtttccc gggcgttgac attatcctcg
     4861 gacccgagat gaaatcgacc ggcgaagtga tgggaatcga taaagatttc ccgagcgctt
     4921 ttgccaaatc tcaattgggc gccggcacca tcctgccagc cgaaggtacg gtctttatct
     4981 cggtcaaaga cagcgacaag caggcaggct gccaaatagc ccgtgacctc aacgggctcg
     5041 gttttaaaat attagccacc ggtggaacgg ccaaattctt tgctgataaa ggtattgatg
     5101 tcaagcgggt caataaagtg ctgcaagggc atccccattg cgtcgatgca attctctccc
     5161 gcgaggtaca aatgatcgtc aacaccaccg aaggggcgca agctatattc gatagctttt
     5221 ctatccgaag ctcggcgctc accaataatg tcccccacta cacgaccatg gccggcgcgg
     5281 cggcagcggt tggcgcgatc cgcatgcaag atgctcaagg agcaaatacc gataagggac
     5341 ttgaagtt
//
LOCUS       DASCNL010000144         1993 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000327085, whole genome shotgun sequence.
ACCESSION   DASCNL010000144 DASCNL010000000
VERSION     DASCNL010000144.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000327085"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="QF359_01875"
     CDS             complement(<1..524)
                     /locus_tag="QF359_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO85687.1"
                     /translation="MSNDTIFDELTPQILSHASGASIAYHTLSGTSPGIVFMTGFMSD
                     MTGGKALALENFARERGQAFLRFDYQGHGQSSGKLADGTIGLWAADALVAFDELTEGP
                     QIIVGSSMGGWIMLLTACARPERVAGLVGIAAAPDFTEDLLPNELSQEQFAEIEANGF
                     VVVPSEYEDDYTFT"
     gene            603..1826
                     /locus_tag="QF359_01880"
     CDS             603..1826
                     /locus_tag="QF359_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HJO85688.1"
                     /translation="MDTDHSIENSGIKTSADSGEIDGIEMRPPTVMQVLPELVTGGVE
                     RGTIDVAHAIVEGGGRSIVVSAGGLMTHELQRLGVEHFELPLASKNPFVMQQNIQRLV
                     LLAMQEQVDIIHARSRAPAWSAYYAARRTKKHFITTFHGTYNHGNWLKRRYNSVMTKG
                     ERVIAISDFIAGHIRKIYGVPSSNIRIIPRGIDLDKFDATKISQERRIKLANEWRLPD
                     DMSIIMLPGRLTRWKGQTIFIEAIKKLGRSDVKCLMVGSDQGREDYRQKLEKEIERYG
                     MQNIIHIVDHCDDMPAALMLTDVVVSASTDPEAFGRVVVEGQALGRPVIGTNHGGSIE
                     TIIKGKTGWLAEPNDPDSLATAIGKILDLSEAQRIKISESAITHIHENYSKEIMCART
                     LDVYNELIAGDTNSS"
     gene            1832..>1993
                     /locus_tag="QF359_01885"
     CDS             1832..>1993
                     /locus_tag="QF359_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007281711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase"
                     /protein_id="HJO85689.1"
                     /translation="MSENSSTKKILVIKLGALGDFVQAAGPFAAIRRHHQDAEITLLT
                     APAFAEFAGA"
BASE COUNT          542 a          509 c          481 g          461 t
ORIGIN      
        1 ttggtgaatg tataatcatc ttcgtactca cttggcacga cgacgaagcc atttgcctcg
       61 atttccgcga attgctcttg actcaattca ttgggtagca aatcctctgt aaaatcggga
      121 gcagcagcaa taccaaccag cccggcgaca cgctccggcc gcgcgcaggc cgtcagtagc
      181 attatccagc cacccatgga tgagccgaca ataatctgtg gcccctcagt caattcatca
      241 aacgcgacca gcgcatccgc cgcccagaga ccgatagtgc catcggctaa ttttccggag
      301 gactggccat gcccctggta atcgaaacgt aaaaacgcct gcccacgttc gcgggcaaaa
      361 ttttccagcg ccaatgcttt accacctgtc atatccgaca taaatccagt cataaaaacg
      421 atacccggtg aagtacctga gagggtgtgg taagcgatgg acgcaccaga agcgtgtgat
      481 agtatctggg gtgtgagttc atcaaagatg gtatcgtttg acattattta accgttcatg
      541 agaaatgaga cgaataaagc gatatgaata ataacgtttt actggcattt taggttttaa
      601 atttggacac cgaccatagc atcgaaaatt cgggaataaa aacctctgct gattcaggtg
      661 aaattgatgg cattgaaatg cgtccaccga cggtcatgca ggtgttgccg gaattggtaa
      721 ccggcggggt agagcgcggc actattgatg tcgctcacgc tattgtcgag ggcggcggac
      781 gctctatcgt cgtctccgca ggcggtctga tgacccacga attacagcgc ttgggcgttg
      841 aacattttga actaccgtta gccagcaaaa atccatttgt catgcagcaa aacatccagc
      901 gtctcgtgct attagccatg caggaacaag tcgacattat ccacgcccgt tcacgggcac
      961 ctgcttggag tgcctattat gccgctcggc gcacaaagaa acattttatc acgacctttc
     1021 atggcactta taatcatggc aattggctta agcggcgcta taactccgta atgaccaaag
     1081 gcgagcgcgt tatcgccata tctgatttta tcgctggtca catccgcaag atttatggtg
     1141 ttccctcttc caatattcgg attatcccac ggggcatcga tctcgataaa tttgatgcga
     1201 ccaagatcag ccaggaacgc cggatcaaac tcgccaatga atggcggttg ccggatgaca
     1261 tgtcgatcat catgttgccg gggcgcttaa cccgctggaa aggtcaaacc atctttatcg
     1321 aggcaatcaa aaaacttggg cggtcggatg ttaaatgcct aatggtcggt tcggatcaag
     1381 gacgggagga ttatcgccaa aaactggaaa aagagattga acgttacggc atgcaaaaca
     1441 ttattcatat tgtcgatcat tgtgatgaca tgccggctgc cctaatgctc actgatgtag
     1501 tggtgtcagc ctcaaccgat cccgaagcat ttggccgggt ggttgttgaa ggccaggccc
     1561 tcggccggcc agtaatcggc accaatcacg gcggctcaat agaaaccatc atcaagggca
     1621 aaaccggctg gcttgcagaa ccaaatgatc cggattcgct cgccacagca atcggtaaaa
     1681 ttctcgatct cagcgaagct caacggatta aaatatcaga gagcgcaatt acccatattc
     1741 acgagaacta ctccaaagaa ataatgtgcg ccagaacact cgatgtttat aacgagttaa
     1801 tagctggtga caccaattca tcgtgagcaa aatgtccgaa aatagtagca ccaaaaaaat
     1861 actcgtcatt aagttgggag cactcggaga ttttgtccaa gcggcaggcc cgtttgccgc
     1921 catccgccgc caccatcaag acgctgagat aaccctcctg acggcacctg cttttgccga
     1981 atttgccggc gcg
//
LOCUS       DASCNL010000145         1081 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000330020, whole genome shotgun sequence.
ACCESSION   DASCNL010000145 DASCNL010000000
VERSION     DASCNL010000145.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000330020"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="QF359_01890"
     CDS             <1..447
                     /locus_tag="QF359_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HJO85690.1"
                     /translation="LAARDRAWIIAGVCMVASVIGGVFGYGIGFFLFEQIGKPVLEVY
                     RYSSKFAEFQETYNEWGAWAVFFAGVTPFPYKVITILSGVTGLSLPVFIVASMLARGL
                     RFFIVAALLWKFGEPIKAFIERRLGLLFVLFCILLIGGFVVVKYLL"
     gene            460..966
                     /locus_tag="QF359_01895"
     CDS             460..966
                     /locus_tag="QF359_01895"
                     /inference="COORDINATES: protein motif:HMM:NF014639.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HJO85691.1"
                     /translation="MMTEKADKIVLSILLLASIGALATAFTAQYVFDLEPCILCKYQR
                     IPYFAVILFAGIGMYTEMADQAGTLKVVGVIFLLGAALAFYHSGVEQHWWEAATSCGS
                     SGGEALTSFKNFVGQLMTKMPKRCDEVDWTLFGLSMTVYNTAATIGLAAVSFFGATVL
                     KKYNTELE"
BASE COUNT          230 a          231 c          295 g          325 t
ORIGIN      
        1 ttggctgcgc gtgatcgagc ttggattatt gccggtgttt gtatggtggc ctcggtcatt
       61 ggcggtgtgt tcggctatgg catcggcttc tttttgttcg agcagatcgg taagccggta
      121 ctggaggttt atcgttatag ctccaaattc gccgaatttc aggaaaccta taacgaatgg
      181 ggcgcttggg cggtcttttt cgctggcgta acaccgtttc cttacaaagt aattacgatc
      241 ttgagcggcg tgaccgggtt gagcctgccg gtttttatcg tcgcgtcgat gctcgcccgt
      301 ggattacgat tttttatcgt tgctgctttg ctgtggaaat tcggtgaacc gataaaagct
      361 tttatcgagc gccgccttgg gcttctgttt gtcctcttct gtatcttatt aattggcggc
      421 tttgtcgtgg ttaaatatct gctttagaat gcttttataa tgatgacaga aaaagccgat
      481 aaaattgtat tgagcatttt actactggcg agtattggcg ctttggcgac agcatttacg
      541 gcgcaatatg tatttgattt ggagccctgc attctctgta aatatcagcg catcccctat
      601 tttgccgtca tcctttttgc aggtattggc atgtatactg aaatggctga ccaggcgggg
      661 acgctcaaag tcgttggcgt tatttttctg ctgggcgctg ccttggcttt ttaccatagc
      721 ggcgtcgagc agcattggtg ggaagcggcg acgagttgcg gtagtagcgg cggtgaagcg
      781 ctgacaagtt ttaaaaactt tgtcggtcaa ttgatgacca aaatgcccaa acgctgtgat
      841 gaggtcgact ggaccttgtt tggcctatcg atgaccgtct acaatacggc agccacgatc
      901 ggtttggccg cagtcagttt ttttggcgcc actgtcttaa aaaaatataa tacggaatta
      961 gagtagccaa tgccccgcaa agcaaaacat tatggccggt tgcccggcga tccaaccaag
     1021 gatgagatga ttgagcggat tattcgcgtc gatcaggccg gtgaatacgg tgccaaacgc
     1081 a
//
LOCUS       DASCNL010000146         1356 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000332990, whole genome shotgun sequence.
ACCESSION   DASCNL010000146 DASCNL010000000
VERSION     DASCNL010000146.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1356)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000332990"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1025
                     /locus_tag="QF359_01900"
     CDS             <1..1025
                     /locus_tag="QF359_01900"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO85692.1"
                     /translation="LGKIPIPVHALGDAGPYLDAAVVITKDPETSIRNTSIQRFLVID
                     KNTLAINIDSGRHLELCLNKAAQRGQDLHLTINIGVGPGLHFAASAPAEAAPFGTDEL
                     GIACAFHGEPLRLAKGYHSRVEIIADAMYALECSITPGDLIDEGPFAEVTGNYADREP
                     RPRVKVISIHHRRKPIFHSILPGKEVHNSVGLLGETNVLNLLQKQIPGVKDVYFSHGG
                     CGFYHAIVQISQVRAGWGKQAIMAAFAAFPPLKMVTVVDDDVDIRNPSDVEWAMATRL
                     DGKSGILQIEKAFGHGLNPTFDDYIGTKIGFNATRPFPFSPQFDRVEMKKMDISKLKI
                     RGKKKK"
     gene            complement(1041..1274)
                     /locus_tag="QF359_01905"
     CDS             complement(1041..1274)
                     /locus_tag="QF359_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85693.1"
                     /translation="MLQHTMNGRKAFEVTLYNKDVRAAVKENQSHTIYGDHWADAQIQ
                     DVMAANELEALSLIGRRYPPEEGFVVQELAECS"
BASE COUNT          358 a          332 c          310 g          356 t
ORIGIN      
        1 atcttggcaa aatcccaatt ccggttcatg ccctgggtga tgccggacct tatttagacg
       61 ctgccgtcgt tatcaccaag gatccggaaa ccagtattcg aaacacgtcc attcagcgct
      121 ttctggtgat cgataaaaat acccttgcca tcaatatcga ttccggacgg catttggaat
      181 tatgtttaaa taaagcggcg caacggggcc aagaccttca tctgactatt aatatcgggg
      241 ttggtccggg cttacatttt gccgcttctg cacctgctga agcggcgccg ttcggtaccg
      301 acgagttagg catagcctgt gctttccacg gcgagccgct gagattggcg aagggctacc
      361 actctcgcgt tgaaattatt gccgatgcga tgtatgcgct cgaatgcagc attacccccg
      421 gtgatttgat cgatgagggc ccatttgctg aggtgacggg taattacgcc gaccgcgaac
      481 cgcggccccg tgttaaagtc atcagcatcc atcatcgcag aaaaccaatt tttcattcaa
      541 ttttacccgg taaagaagtg cacaattcgg ttggtttact tggcgaaacc aatgttttaa
      601 atcttttgca aaagcaaatt cccggggtca aagatgtcta tttcagccat ggcggctgcg
      661 gcttttatca tgcgatcgtc caaatatcgc aagtccgagc aggctggggt aagcaagcaa
      721 ttatggcggc tttcgcggcc tttccaccgc tcaaaatggt aaccgtggtt gatgatgacg
      781 tcgatatcag aaacccgtcc gatgttgaat gggcaatggc cacgcgactt gatggaaaat
      841 ccggtattct acagattgag aaagcttttg ggcatggctt aaacccaacc ttcgatgatt
      901 acatcggcac caaaattggt tttaacgcta cccggccgtt cccgttcagc ccacagtttg
      961 atcgagtgga aatgaaaaaa atggatattt ctaaactaaa aattcgtggc aaaaaaaaga
     1021 aatagcgaaa taaaggtgcg ctagctgcat tcagccaatt cttgaacaac aaatccttct
     1081 tcgggcggat aacgtcggcc aattagactc aaagcttcca actcattggc agccataaca
     1141 tcttgaatct gtgcgtcggc ccaatgatcc ccgtaaatag tatggctttg gttttctttt
     1201 accgccgccc gtacatcttt attgtatagg gtaacttcaa acgccttcct accattcatc
     1261 gtatgttgca gcatcttccg gacctttcat atccgttaaa aagattacct gcatcaccta
     1321 gacaggaaat gaggcaacag tacgtaaatt ctaagg
//
LOCUS       DASCNL010000147         2865 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000333869, whole genome shotgun sequence.
ACCESSION   DASCNL010000147 DASCNL010000000
VERSION     DASCNL010000147.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000333869"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="QF359_01910"
     CDS             <1..422
                     /locus_tag="QF359_01910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HJO85694.1"
                     /translation="MQQAQENLSIKTTGQGLYELARDVVDWSNGLAFDTGLLTLYCRH
                     TSASLVIQENADSDVMRDLETFFKQLVPEDLSLYRHRSEGKDDMPAHIKGALTQTTLT
                     IPLSQGCLALGTWQGIFLFEHRAQPHTRNLVLHMVGE"
     gene            424..2373
                     /locus_tag="QF359_01915"
     CDS             424..2373
                     /locus_tag="QF359_01915"
                     /inference="COORDINATES: protein motif:HMM:NF025214.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJO85695.1"
                     /translation="MSQAQLEKGLELHQQGKLDEAAAIYQEVLTADPGNADALHFLGL
                     IAQQRGDLSTAIEQIEAAIAVEPERSTFYFNLGATFSAAGNLTGAAAAYQKASQLKPD
                     WSDALVNLGTILGQLKKYPPAETALRQALELEPQNVSAMIGLTAALEGQGQSAEAEKI
                     GRQTIVLAGSSPEAWTNFGNALNSQEKLSEAEDAFRQALAADAAYSTARYNLGNVLNK
                     QWRKSEALACYRQVIEADPNYLSAWQNMLLNLLYEPEQTESTIFAAHRAWAKQFASAI
                     PAFPSEKTAGKRLKIGYVSPDFRTHSCAYFLKPLFAAHDRDAFEIYAYANLRQQDETT
                     PWFREQADHWCDIIDVSDTDAAERIREDKIDILVDLAGHSANNRLDIFALKPAPVQIS
                     WLGYPSTTGLPEIDYRLTDEVTDPSGDADAYHSERLIRLEDGFHCYQPATTIPDVGPL
                     PVLENGYVTFGSFNHTSKITEEVIEIWSQILTRVPESRLLLKGRQLDSEIVQQKIYEL
                     FENQSVSAERVTLTGWIARDQNPLVLYNSVDICLDTFPYNGTTTSFEALTMGAPVITL
                     RGERHAARVGASILTHLGRSEWIVGTLESYIEKARELAEDLPALQEIRENLRAQLQQS
                     SLANTTEFAAKIEAVYQEICVNKLT"
     gene            complement(2436..>2865)
                     /locus_tag="QF359_01920"
     CDS             complement(2436..>2865)
                     /locus_tag="QF359_01920"
                     /inference="COORDINATES: protein motif:HMM:NF013098.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJO85696.1"
                     /translation="VSEDTIPSTGEKCPYMHIFFAMKDSSCVAFFEVPNEPPMQKDPN
                     TPEWVQHLALQVESMEELLERKQILEDTGVEVIGPTNHGFCESIYFFDPNGHRLELTL
                     HIGDEAMMNKLRSTAPEMLQKWNKTKKVQRQAAWVHDGST"
BASE COUNT          712 a          693 c          751 g          709 t
ORIGIN      
        1 ccatgcaaca ggcacaagaa aatctgtcta ttaagacgac cggtcaggga ttatatgagc
       61 tggcccgcga cgtcgttgat tggagtaacg gactggcttt cgacactggg ttgctgacgc
      121 tttattgccg ccatacgtcg gcatctttgg ttattcagga aaacgccgac tcggatgtga
      181 tgcgcgatct cgagacattc tttaaacagc tcgtgcctga agatttatcg ctttaccgcc
      241 accgctcgga aggcaaagat gatatgccgg cccatatcaa aggggcgctg acgcaaacga
      301 cgctgacgat accgctcagc caagggtgtc ttgcgttggg aacttggcag gggattttct
      361 tgtttgagca tcgggcgcaa ccccatacac gaaacctcgt gctgcatatg gtgggagaat
      421 aaaatgtcac aggcgcaatt ggaaaaaggc ctcgaattgc atcaacaggg caagcttgat
      481 gaagcggcgg caatttatca ggaagtattg accgccgatc caggtaatgc ggatgcgctg
      541 cactttttgg gtttgattgc gcaacagcgt ggtgatttat cgacggcgat tgaacaaatc
      601 gaagcagcta ttgccgtcga gccggagcga tcgacctttt attttaatct tggcgcgacc
      661 ttctcggcag caggcaatct gactggtgcg gcggcggctt accagaaagc cagccagctt
      721 aaacccgatt ggtctgatgc cctggttaat ctcggtacga tcctgggtca gctcaaaaaa
      781 tacccgccag cggaaacagc tttgcggcaa gcgctggaat tagagcccca gaatgtctca
      841 gccatgattg gtttaacagc agccttggaa ggtcagggcc aaagcgcgga ggcggaaaag
      901 attggccggc agacaatagt attggctgga tcaagccccg aggcctggac aaattttggc
      961 aatgcgctca atagccagga aaaactaagc gaggccgaag acgcttttcg ccaggccctg
     1021 gcagcggatg cagcctattc aacagccagg tacaatctcg gcaatgtttt gaataagcaa
     1081 tggcgcaagt ccgaggcgct tgcgtgctac cgtcaagtga ttgaggctga ccccaattat
     1141 ttgagtgcct ggcagaatat gctgctgaat ttgctgtatg agccggagca gactgaaagc
     1201 accatttttg cagcccatag agcgtgggca aagcagtttg cctctgctat cccggcgttt
     1261 ccatcagaaa aaaccgccgg aaaacggttg aaaatcggct atgtctcgcc ggatttcaga
     1321 acccactcct gcgcttattt cctgaaacca ctctttgccg cgcatgaccg cgatgctttt
     1381 gagatttatg cctatgccaa tctgcggcag caagatgaaa ccacgccctg gttcagggaa
     1441 caggcggatc actggtgcga cataattgat gtgagcgata ccgatgcagc cgagcgcatc
     1501 cgggaagaca agattgatat cttggtcgat ttggctgggc atagcgccaa taatcggctt
     1561 gatatttttg ccttaaaacc cgcacccgtt caaatttcct ggctcggtta tccttcgacc
     1621 acaggattgc ctgaaatcga ttaccgctta accgatgagg tgactgatcc gtcaggagat
     1681 gccgacgcct atcacagcga acggcttatt cgcctcgaag atggttttca ttgctaccaa
     1741 ccggctacga ctatcccgga tgtagggcct ttgcctgttt tggaaaatgg ttatgtgacc
     1801 ttcggctcgt ttaatcatac gtcgaagata accgaggaag tcatcgaaat ctggtcacaa
     1861 attctaacta gagttccgga gtccaggctc ttgcttaaag gccgtcaact ggactctgaa
     1921 attgtccagc agaaaattta tgagctattt gaaaatcaga gcgtctctgc tgagcgggta
     1981 acgctgaccg gctggatcgc ccgggatcag aatccgctgg tgctctataa cagtgttgat
     2041 atttgtctcg acacctttcc ttataatggc acaacgacaa gttttgaggc actgacgatg
     2101 ggagctccgg tcatcacctt acgtggcgag cgtcatgctg cgcgggttgg tgcgtcgatc
     2161 ctaacccatc ttggccggtc tgagtggatt gtcgggacgc tcgaatctta tatcgaaaag
     2221 gcacgtgagc tggctgaaga tttgcctgcg cttcaagaaa tccgggaaaa tttacgggcg
     2281 caattgcagc aatcgagttt ggcaaatacc actgaatttg ccgctaaaat tgaagccgta
     2341 tatcaagaaa tatgcgtgaa caaactgacc tgaacttaat atttgatcga ctgtcgataa
     2401 acaacgatta taaatcgggc gctaaattat tgattttacg tcgagccgtc atggacccat
     2461 gctgcctggc gctggacttt tttggtttta ttccactttt ggagcatttc cggcgcggtg
     2521 gacctaagtt tgttcatcat tgcttcatcg ccgatgtgca aggtcaattc gaggcgatga
     2581 ccattggggt cgaaaaagta gattgattcg cagaaaccgt gattggttgg gccaattacc
     2641 tcgacgccag tatcttccaa aatttgctta cgctctaaga gctcttccat actttcgacc
     2701 tggagcgcca aatgctgtac ccattcaggt gtgttaggat ccttttgcat cggcggttcg
     2761 ttcggcacct cgaaaaaggc gacgcaggaa ctatctttca tggcaaaaaa gatatgcata
     2821 tacgggcatt tctcgccggt tgatggaatc gtatcctctg atacg
//
LOCUS       DASCNL010000148         1296 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000335743, whole genome shotgun sequence.
ACCESSION   DASCNL010000148 DASCNL010000000
VERSION     DASCNL010000148.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000335743"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..967
                     /locus_tag="QF359_01925"
     CDS             <1..967
                     /locus_tag="QF359_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJO85697.1"
                     /translation="LLEGAVSCRATATGMAAVFASLAASVSAGDRLVSSKALFGSCDF
                     VCRELLPKFGIDTTMVNGTNLDEWEAALSKPTAAVFMETPSNPQMDIIDIKAVCEVAH
                     KAGARVVVDNVFATPILQKPLEFGADVVVYSGTKHIDGQGRAMGGCILTDDVEWSDDD
                     LKQFMRHTGPSLSPFNAWVHLKGLETLEIRVERHCESAQKVAEFLEGQSAVSKVLFPG
                     LKSHPQYDLAQSQMSGPGTVVCFNIDGDMARTFTFLNAMELIDISNNLGDAKSLMTHP
                     ATTTHQRLTPEGRLEVGITDNLVRLSVGLEDVDDIIEDLDQALKA"
BASE COUNT          316 a          311 c          334 g          335 t
ORIGIN      
        1 gctgcttgaa ggggcggtat cgtgccgggc gacggcaacc ggcatggcgg cggtttttgc
       61 ctcgctcgcc gccagcgttt ctgctggtga ccggctggtt tcttccaagg cgttgtttgg
      121 ttcttgcgat tttgtctgtc gcgaattact gccaaaattt ggcatcgaca caaccatggt
      181 gaacggcact aatttggatg agtgggaggc agccttgagc aagccgaccg ctgcggtttt
      241 tatggaaacg ccttccaatc cgcaaatgga tatcattgat atcaaagccg tttgcgaggt
      301 ggcacataaa gcgggtgctc gggtcgtcgt tgataatgta tttgccacgc cgatcctgca
      361 aaaacccttg gagttcggcg ccgatgtcgt cgtctactcc ggcaccaaac atatagatgg
      421 tcagggccgc gccatgggcg gctgtatcct gaccgatgat gtcgaatggt cggatgatga
      481 tcttaaacag tttatgcgtc ataccggccc atcactgagc ccgtttaatg cctgggttca
      541 tttgaagggc ctggaaacgt tggaaattcg tgtggaacgt cattgtgaat cggcgcaaaa
      601 agtagctgag tttttggaag gtcaatcggc ggtttcaaaa gttctgtttc ccgggctcaa
      661 aagtcatcct caatatgatc tcgcccaaag tcaaatgagc ggcccgggca ctgtcgtctg
      721 tttcaatatc gatggcgata tggcgcggac gtttacgttc ctgaacgcga tggaactcat
      781 cgatatctcc aacaatctcg gcgatgctaa aagtctgatg acccatccag cgaccaccac
      841 tcatcagcgt ttgacgccgg aaggccgcct cgaagtcggt attaccgata atctggtgcg
      901 cctgtcggtc ggcctcgaag atgtcgatga tatcatcgaa gatttggacc aagcgctgaa
      961 agcttgataa ctcaagtcgt caaaacacac cgtcaatttg gcgaaggcct caatccagtt
     1021 ttatttctgg atcctgaatc aagtccgggg taacgaccaa attttgaggt gaataaactc
     1081 gctccttaaa tcagcccctc ccaccttaat cctccccctc gatggaggag ggttgggtag
     1141 gggcaacttt caagttaaat taatctttga ctgtaaaact aaattggatt tcacttttta
     1201 gaacaagtac gaaaaccctc taattataaa ataaattgcg tcattaatat ctgcaatttg
     1261 accaaaggct cagaggggat acggaacaca gttggt
//
LOCUS       DASCNL010000149         1280 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000336875, whole genome shotgun sequence.
ACCESSION   DASCNL010000149 DASCNL010000000
VERSION     DASCNL010000149.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000336875"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1280)
                     /locus_tag="QF359_01930"
     CDS             complement(<1..>1280)
                     /locus_tag="QF359_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HJO85698.1"
                     /translation="VGEEALKNMDEAGIVYIGAEVQPNDILVGKVTPKGESPMTPEEK
                     LLRAIFGEKASDVRDTSLRLPPGVAGTVVEVRVFSRRGVDKDERALAIERAEIERLAK
                     DRDDEIAILERSFHARIRERLLNKRVVSGPKGLTVGTKVTEEILEKLTAGQMLQIVIG
                     TDKVMSEIESLKKQLEEGVGEFQSRFEDKVDKLERGDELPPGVMKLVKVFVAVKRKLQ
                     PGDKMAGRHGNKGVISRIMPAEDMPALEDGTSVDIVLNPLGVPSRMNVGQILETHLGW
                     ACAGLGQQVGDTLEAMNHGDGTIKDVRNKLKFVYGDDTYKEDIAGMDDDAVIELANNV
                     KGGVPIATPVFDGAHEEDINVALEKAGVNESGQVKLFDGRTGEYFDREVTVGYIYILK
                     LHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQ"
BASE COUNT          286 a          375 c          289 g          330 t
ORIGIN      
        1 ctgacctccg aattgcgcct taccacccag cggctgctgc gtgacaagac tgtatgggcc
       61 aattgaacgg gcatggattt tatcatcgac caagtgatgg agcttcaaga tataaatgta
      121 gccaaccgtc acttcacgat cgaagtattc acctgtccgg ccatcgaaca acttgacctg
      181 acccgattca ttcaccccgg ctttttcaag tgctacgttg atatcctcct catgggcgcc
      241 gtcgaaaacc ggcgtcgcaa tgggtactcc acctttaaca ttgttggcaa gctcgatgac
      301 ggcgtcatca tccatgccgg caatgtcttc tttataggta tcatcaccat aaacaaattt
      361 cagtttattg cgcacgtctt ttatggtgcc gtcgccatgg ttcatggctt caagcgtatc
      421 gccgacctgt tgacctaaac cagcacaagc ccacccaaga tgggtttcga gaatctgccc
      481 gacattcatc cgagacggca caccgagcgg gttcaatacg atatcaactg aggtgccgtc
      541 ttcaagtgcc ggcatatctt cggctggcat aatgcgtgag ataacacctt tgttgccgtg
      601 acggccggcc atcttatcgc cgggctgcaa tttgcgtttt accgcgacga agactttgac
      661 cagcttcatc actccaggcg gcagttcatc accgcgttcg agcttatcga ctttatcctc
      721 aaaacggctt tggaattcac caacaccctc ttccagctgt tttttcaaac tttcgatttc
      781 gctcattact ttgtcggtgc cgatgacgat ttggagcatc tgaccggcgg taagtttctc
      841 aagaatttct tccgtcactt tagtgccgac cgtgagccct ttcggaccgc tgacaaccct
      901 tttgttcaaa aggcgttcgc gaatgcgagc atggaagctg cgttccaaga tcgcaatctc
      961 atcatctcta tctttggcaa ggcgttcaat ctctgcacgt tcaattgcca aagcacgttc
     1021 atctttatca acgccgcggc gtgagaagac acgcacctca acgacagtac cggcaacacc
     1081 cggcggcagg cgcagcgagg tatcgcggac gtccgacgct ttttcaccaa aaatcgcccg
     1141 cagcagtttt tcctccgggg tcatcggcga ttcgcccttc ggcgttacct taccgacaag
     1201 aatgtcgttg ggctgaactt cggcaccgat ataaacgatg cccgcctcat ccatattttt
     1261 gagcgcttcc tcaccgacgt
//
LOCUS       DASCNL010000150         2094 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000338215, whole genome shotgun sequence.
ACCESSION   DASCNL010000150 DASCNL010000000
VERSION     DASCNL010000150.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000338215"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="QF359_01935"
     CDS             <1..762
                     /locus_tag="QF359_01935"
                     /inference="COORDINATES: protein motif:HMM:NF013567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJO85699.1"
                     /translation="VIATRHNSHAELTASALNAGKSVLVEKPLGLTREEIAAIRAARE
                     NSTGFFQIGFNRRYAPLAQQAKAELIKIEGPRFMVFQINAGHIPGESWLHNADEGGGR
                     IIGEMCHFIDLARYFTGTPVVSVQADAARNSDGAADDVTATLRFVDGSLATIAYTSLG
                     DAAVPKERFEIFAGGTVLNLDNFRSLNVTCDGSSQNHTSGGQNKGFGSSLNAFAEAVS
                     SGGPAPLDENELIESSLATVAVLDSLQSGIRIDLG"
     gene            784..>2094
                     /gene="rfaE1"
                     /locus_tag="QF359_01940"
     CDS             784..>2094
                     /gene="rfaE1"
                     /locus_tag="QF359_01940"
                     /inference="COORDINATES: protein motif:HMM:TIGR02198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HJO85700.1"
                     /translation="MTDQAKLATSVEALVTAKVLCIGDVMLDRFVYGDVDRISPEAPI
                     PVFSVNSDKLMLGGAGNVARNLSGLGAVTYFVAVVGNDNAGKDVTKLIGKIDNTEANL
                     ITDPGRRTSIKTRYVASGQQMMRADDESVEAIEGATKNQVITLAKSALKNCEAMVLAD
                     YAKGVLTPEIIQELIGLANTAKVPVIIDPQSIDYSRYRGADLITPNLKELADATAMAV
                     GDDDEISAAARKLITEHKITSVLATRSGDGMSLIGADSFDHFTAEAHEVFDVSGAGDT
                     VAATIAASLAAGVDLNEAVHLANTAAGIVIAKVGTAVAYASDIIEALHQQEFSLSEVK
                     ILSLNSAIEHAEVWRLKGHRIGFTNGCFDLLHPGHISTIAKAKAACDRLIIGLNNDVS
                     VKRLKGEDRPVQSEAARAQVLAGLENVDVVVIFSEDTPANIIDAI"
BASE COUNT          508 a          549 c          563 g          474 t
ORIGIN      
        1 gtaattgcga ctcgccataa cagccatgcc gagctgaccg caagcgcctt aaacgcgggt
       61 aaatcggtgc tggtcgagaa gccactcggt cttacccgtg aggagatcgc tgccattagg
      121 gcagcccgtg aaaactccac cggctttttc caaattggct tcaaccgccg ctatgcccct
      181 ttggctcaac aagccaaagc cgagctgata aaaattgagg gcccacggtt catggtgttt
      241 cagataaacg ccgggcatat tccaggcgaa agctggctcc ataacgctga tgaaggcggc
      301 ggccgcatca ttggtgaaat gtgccacttt atcgatctcg cccgttattt tactggcaca
      361 cccgtcgttt cggtgcaggc cgatgcagcg cgtaattcag acggcgctgc cgacgacgtt
      421 acagcgacac tccgttttgt agatggtagt ctcgcaacca tcgcctacac cagccttggt
      481 gatgccgccg tgccgaagga gcgttttgaa atatttgctg gcggtacggt cttgaacctc
      541 gataatttta ggagtctcaa tgtgacctgt gatggctcga gccaaaatca tacgagtggt
      601 ggccagaaca aaggatttgg cagttccctc aacgcgtttg ccgaggcagt ttcttcggga
      661 ggcccagcgc cgctagatga aaacgaattg atcgaaagca gcctcgccac cgtggccgtg
      721 ttggactcac tgcaatctgg tatcagaata gatctggggt aggtctatga gacaggtgac
      781 agaatgactg atcaggccaa attggcaacc agcgtcgaag ctcttgtaac ggcgaaagtg
      841 ctttgcattg gcgatgtaat gctggaccgc tttgtctatg gcgatgtcga ccgcatctcg
      901 cccgaagcgc cgatcccggt gtttagtgtc aattcagata aattgatgtt aggtggcgcc
      961 ggaaatgtcg cccgcaatct atccggtctc ggtgcggtga cgtattttgt cgctgttgtc
     1021 ggcaacgata acgcgggcaa agacgttacc aaactgattg gtaaaattga taataccgaa
     1081 gctaatttaa tcaccgatcc cgggcgccgc acctcgatca aaacccgtta cgtagccagt
     1141 ggacagcaga tgatgcgcgc cgatgacgaa agcgtggaag ccatagaagg cgcaaccaaa
     1201 aatcaggtta ttaccctcgc caaatcagcc ttaaaaaatt gtgaggctat ggtcttggcc
     1261 gattacgcca aaggcgtgct gacaccggag attatccaag aactcattgg gcttgccaat
     1321 accgccaagg tgccggttat cattgacccc cagagcattg attacagccg ctatcgaggc
     1381 gctgatctga taacgcccaa ccttaaagag ctcgccgatg cgaccgctat ggcggtggga
     1441 gatgatgatg aaattagcgc tgctgcgcga aaattaatca ccgaacataa aataacatct
     1501 gtactggcta cccgcagcgg tgatggtatg agcctaatcg gtgccgatag ctttgaccat
     1561 tttaccgcag aggcgcacga agtttttgat gtctctggcg cgggtgacac ggttgccgca
     1621 accatagccg ccagcctagc cgccggcgtt gacttgaacg aagccgtgca tctggccaat
     1681 acggctgccg gtatcgtcat cgccaaagtc ggcaccgcgg tcgcttatgc cagcgatatt
     1741 atcgaggcgc tacaccagca ggaattttct ttaagtgaag ttaaaatact gtcactgaac
     1801 tcggcgatag agcacgctga agtctggcgc ttgaagggcc ataggatcgg ctttaccaac
     1861 ggctgttttg atcttctgca tccgggtcat atctctacca tcgctaaagc caaagccgcc
     1921 tgcgaccggc tgattattgg cctcaataat gatgtgtcgg ttaagcgact taaaggtgaa
     1981 gaccggccgg tgcaatccga agccgcccgc gcgcaagttc tggcgggtct cgaaaatgtc
     2041 gacgtcgtgg taattttctc agaagacacc ccggccaata ttatcgacgc catc
//
LOCUS       DASCNL010000151         1030 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000343003, whole genome shotgun sequence.
ACCESSION   DASCNL010000151 DASCNL010000000
VERSION     DASCNL010000151.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1030)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1030)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1030
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000343003"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="QF359_01945"
     CDS             <1..300
                     /locus_tag="QF359_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJO85701.1"
                     /translation="VKQRPRDGYIIDSLGWVLYRLGDMKGAVKQLERAVVLRPEDPTI
                     NDHLGDIYWAVGRKNEAAFQWNRALTLEPEKDIIPKIELKLKEGLPKDANKRKGI"
     gene            306..>1030
                     /locus_tag="QF359_01950"
     CDS             306..>1030
                     /locus_tag="QF359_01950"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:NF011202.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HJO85702.1"
                     /translation="MPDKISVFAPAKINLYLHVTGKREDGFHLLDSLIVFADCGDQIV
                     AAPADQLTFSIDGPFAGALSSGDDNFVIKAAHMLAELAGIEPLAKITLTKNLPIASGI
                     GGGSADAAATLQALIELWRITLSQDELFTLAGQLGADVPVCLTGRPSFVSSIGEKITP
                     AAPLPKAWLALVNPGEPVATPEVFAKRVGDFSAAQSFDVTPATPNELASILGEHQNDL
                     TTAATKVAPVISDVLSALRATSG"
BASE COUNT          246 a          262 c          278 g          244 t
ORIGIN      
        1 gttaagcaac ggcccaggga tggttatatt atcgacagct taggctgggt gctctatcgc
       61 cttggtgata tgaagggcgc cgtcaaacaa ttggagcgcg ccgttgtatt gcgcccggaa
      121 gacccaacca tcaacgacca tcttggtgat atttattggg cggtcggacg aaaaaatgaa
      181 gctgctttcc aatggaaccg ggcgctaacg ctcgagcctg aaaaggatat aattcccaag
      241 attgagctca aattaaaaga aggcctaccg aaagacgcga ataagcgcaa aggaatctaa
      301 tcaccttgcc tgacaaaatt tcagtctttg cgccggccaa aattaatctc tatctccatg
      361 tcactggcaa acgcgaagat ggctttcact tgcttgatag cttgatcgtc tttgccgatt
      421 gtggcgatca aatcgtggcg gctcctgccg atcaactgac gttctcaatt gacggtccgt
      481 ttgccggggc gctttccagc ggtgatgaca attttgtcat taaggcggcg catatgttag
      541 cggagcttgc cgggattgag ccgttggcga aaatcacgct caccaagaat ctgcctatcg
      601 cttcgggtat tggtggcggg tcggccgatg cagcggcaac attacaagcc ttaatcgagc
      661 tttggcggat aacgctgagc caagacgaac tgttcacctt agcgggacag ttaggcgctg
      721 acgtgccggt ttgcctgacc ggcaggccat cttttgtcag cagcattggc gagaagatca
      781 ccccggcggc gcctttgcct aaagcctggc tggcactcgt caatccagga gagcctgttg
      841 ccacaccaga ggtttttgcc aagcgggttg gtgatttttc tgccgcacaa tcgtttgatg
      901 taacaccggc aacgcctaac gaactcgcat cgattttagg cgaacatcaa aatgatctaa
      961 caactgcggc gacgaaggtt gcgcccgtca tttcagatgt gctgtcagcg cttcgagcca
     1021 cgagcggtca
//
LOCUS       DASCNL010000152         2460 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000344975, whole genome shotgun sequence.
ACCESSION   DASCNL010000152 DASCNL010000000
VERSION     DASCNL010000152.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000344975"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(226..1386)
                     /locus_tag="QF359_01955"
     CDS             complement(226..1386)
                     /locus_tag="QF359_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJO85703.1"
                     /translation="MGPLAGYRIIEIAGLGPAPFTGMMLSDMGAEVLRIDRAGPPGEF
                     PGQDPRFDVLARGRRSVAVDLKNPEGIETILRLLDQADCLIEGFRPGVMERLGLGPEE
                     CQARNPKLVYGRMTGWGQEGPLAEAAGHDINYIALTGALHGIGREGGKPVPPLNLVGD
                     FGGGGMFLAFGMVCGMLEAAKSGQGQIVDAAMVDGASTLMGLIHGLMSEGNWVDQPAS
                     NMLDTGTHYYDTYECADGKFVAVGAIEPKFYQILLEALDLADDPEMERQHDPAAWPSL
                     KKKFTAAFLTRSRDEWCEILEGSDACFAPVLSLAEVPEHHHMKARDVMVKEDGLVQPA
                     PAPRFSRTTAEIQGPPVEAGHHTRKTLIDWGFEPETVDRLLADEVVMQSPNE"
     gene            complement(1415..>2460)
                     /locus_tag="QF359_01960"
     CDS             complement(1415..>2460)
                     /locus_tag="QF359_01960"
                     /inference="COORDINATES: protein motif:HMM:NF014757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HJO85704.1"
                     /translation="ERNRMTQKKADALLANLTPSMDYANIADVDIVVEAVAEIREIKD
                     TVLKMAAEAVKPGVPIASNTSTMPITGLAVSVPNPESFIGMHFFSPVDRMKLVEVIKG
                     EKTDETTLARALDFAAGIRKTPIVVNDGLGFFTSRVVNSYSGEAFTLLAEGISPFLID
                     DVALKAGMPVGPMTMADATTITLLKDIVASMSGSGERVGMAGMRMTEALAKLVDDYGR
                     SGKAAGKGIFDYDENGQKEWPGLAECFTPMDPPLSREVIEKRLLHPQALEAVRALEEG
                     IIENPIDADVGSVIGWAFPAAYGGVIGYIDTIGTRQFVAECDELAEQFGVRFVAPDML
                     RKMADKDEAFYTD"
BASE COUNT          605 a          715 c          551 g          589 t
ORIGIN      
        1 aggagaacaa ttcacatgaa acttgttaaa cgatacaccg ccctcacgca ttttctgatg
       61 agcaggtaat ttcaaatcat tcggtaaggt tgtccaagat tgttcttggt cggtgacgat
      121 aagaagaata ttaggtctct tagaattcat ctaaattata tcacttatgc gaagcagtta
      181 ttgccttagc aaatgactga tcttcggtga tatcctttct ctcggttatt catttgggct
      241 ttgcatgaca acttcatctg ccaaaagccg atctactgtt tcaggctcaa agccccaatc
      301 gataagggtt tttctggtat ggtggccggc ttctaccggc ggcccctgga tttcagccgt
      361 ggttcggcta aaacgcggcg ccggcgcagg ctgaacaagc ccatcttctt taaccatgac
      421 atcacgcgcc ttcatgtggt gatgttctgg tacttctgcc aaggatagta ccggcgcaaa
      481 acaggcatcg ctaccttcta aaatctcgca ccattcgtcg cggctgcggg ttagaaaggc
      541 ggcggtgaat ttcttcttga ggcttggcca ggcagcagga tcgtgctggc gttccatctc
      601 aggatcatcg gccagatcaa gggcttcgag cagtatttga taaaattttg gctcgattgc
      661 accgacggcg acgaacttac catccgcaca ttcgtaagta tcgtaataat gagtgccggt
      721 atcgagcata ttgctggccg gctgatcaac ccaattgcct tctgacatta gaccatgaat
      781 aaggcccatt aatgtcgaag caccgtctac catggctgca tcaacaattt ggccctgccc
      841 cgatttagcc gcctccaaca tgccgcaaac catgccaaat gctagaaaca taccgccgcc
      901 gccaaagtcg ccgactaggt tcagtggtgg cacaggcttg ccgccttcgc ggccaatgcc
      961 atgcaaagca ccggtgagcg cgatgtaatt aatgtcgtgt ccagcagcct cggccagtgg
     1021 tccttcctga ccccagccag tcatgcggcc atagaccagt ttcggattgc gggcctgaca
     1081 ttcttccggc cccaagccca gccgctccat cacacccggc cgaaagccct caatcaagca
     1141 atcggcctga tcaagcagtc tcaaaatcgt ctcaatgcct tccggatttt ttaaatcaac
     1201 cgcgaccgag cgcctgcctc tggccagcac atcaaagcga gggtcttggc ccggaaactc
     1261 gcccggcggg ccagcccgat caatgcgcag cacttcggct cccatatcgc taagcatcat
     1321 gccggtaaag ggtgccggcc caagcccggc tatttcaatg atgcgatatc ccgcaagcgg
     1381 ccccatctat ttctccgata cttaaactaa ctatttaatc agtatagaag gcttcatcct
     1441 tgtcggccat ttttctgagc atatccggag cgacaaagcg gacaccaaat tgttcagcca
     1501 gctcatcaca ctcggcgaca aactgtctcg tcccaattgt gtcgatatag ccaatcaccc
     1561 caccataagc cgccgggaac gcccaaccaa tcaccgatcc aacatcagca tcaattggat
     1621 tttcaataat tccttcttcc agggcgcgca ccgcttcaag agcttgcgga tgaagtaggc
     1681 gtttttcaat cacctctcgg ctcagcggtg gatccatcgg cgtgaaacat tccgccagtc
     1741 ccggccattc cttttgaccg ttctcgtcat aatcaaaaat acctttgccc gctgctttgc
     1801 cggaccgtcc gtaatcgtcc accagcttgg ccagagcttc ggtcatccgc ataccggcca
     1861 taccaacacg ttcacctgaa ccagacattg aggcaacaat atctttcagc aaagtaattg
     1921 tcgtcgcatc agccatagtc atcggcccaa ccggcatacc ggctttaagc gccacatcat
     1981 caatcaaaaa cggtgagata ccttcagcca acagcgtaaa ggcttcaccg gaataggaat
     2041 taacaacccg gctggtgaaa aagcccagcc catcattgac aacaatcggg gtttttctaa
     2101 tccctgcggc aaagtccagc gcccgcgcta aggtcgtctc atcggttttc tcacctttaa
     2161 tcacctcgac gagtttcatg cgatcaaccg gtgaaaaaaa atgcatgccg ataaatgatt
     2221 cgggatttgg cacactcacg gccaatcccg taatcggcat ggtcgaggtg ttactggcaa
     2281 tcggcacacc gggcttaacg gcctcagcag ccattttgag aaccgtatct ttaatttccc
     2341 taatttcagc aacagcttcg accacgatat cgacgtcagc aatattagcg taatccatcg
     2401 atggcgtcag attagccagc agcgcatcgg cttttttctg ggtcatccga ttgcgttcga
//
LOCUS       DASCNL010000153         2344 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000346920, whole genome shotgun sequence.
ACCESSION   DASCNL010000153 DASCNL010000000
VERSION     DASCNL010000153.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000346920"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..1148)
                     /locus_tag="QF359_01965"
                     /pseudo
     CDS             complement(1..1148)
                     /locus_tag="QF359_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973868.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
     gene            1378..>2344
                     /locus_tag="QF359_01970"
     CDS             1378..>2344
                     /locus_tag="QF359_01970"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85705.1"
                     /translation="MAAPEKMIPMASPEVEVENLGDGGVILRSPQPIGEYPDSQNAWL
                     VAWAEETPDAIFVADRTGPNGEWRRVSYKDFLTQVKSIGQALLNRNLSVDRLVAILSD
                     NAVDNALLLFGAMHVGIPVVPISPAYSLMSQDFGKLKYINGMVSPGLVYVADGEKFGN
                     ALKAIDIGEVEIVVSENSPKTGKSTLFGDLLATEPTTDVDQAYAKVGPDTIAKILFTS
                     GSTGQPKGVINTQRMLCSNQQAMAQCWSFVSEKPPLVVDWLPWNHTFGGNFVLNMTLR
                     NGGTIYVDGGKPAPGIIEQTVANLKDISPTIYNNVPRGFDMLLPYL"
BASE COUNT          591 a          566 c          584 g          603 t
ORIGIN      
        1 cggctaattg acagttcaaa accttcacgc cgcatggttt caatgagaac tgccagttga
       61 agctagcccc gccctgcaac ttcaaaggcg ttcgaatcag tagtggtcgt aacttgtaat
      121 gcgacattgc cttcggcctc acgcaacagg cggtctaaaa taacccgcga ggtcacttta
      181 tcgccctcgg tgccggccaa aggtgaatcg ttgattgaaa aagttatcga caaggtcggc
      241 ggatcaattg gctgtgaatc gattgcctgt tcaattattg gtgcgcagat ggtgtcggca
      301 actgttgctt tggtcagtcc agcaatggcg acgatatcac cggcttcagc tttttcaaca
      361 ggggtgcgtt ctaagccacg gaaagcgagc agttgagtgg cgcggctatc ttcaacgact
      421 ttgccatcac ggttgagcgc acgaattgcc atgttgcggg aagctttacc cgatgcaatt
      481 ttgccggtga ggatgcggcc aaggtaagga tcatattcta aagtggtcgc cagcatggtg
      541 aattcacctt ctgcttcgac gcttggcgct ggcacatgcc gtaggatcag atcaaacagc
      601 gggtccatgt tgtctttgag gccttcgggt tcaaccgcag cccagccttc tttggcggaa
      661 gaataaagat gcgggaaatc gagctgatac tcatcagcat caagggctgc aaataaatca
      721 aatatctcgt ctaatacctc gtcggcgcgc tgatcagggc gatcgacttt gttgatcaga
      781 accatcggac gaaggccaag tccaagtgcc ttgcctaata cgaatttagt ttgcggcatc
      841 ggaccttcgg cagcatcaac aagaacgaca acgccatcaa ccatgcttaa gatgcgctcc
      901 acctcgccac caaaatccac gtgacccggt gtgtcgatga tattgatgcg cgcatcgttc
      961 cgttcaaccg acgtacattt cgccaggatc gtgatgccgc gctcgcgctc caaatcagtg
     1021 gaatccattg cgcgttcctg tacttgctgg ttttcgcgaa agacgccgct ttgtttgagc
     1081 aggcaatcca ccagggtcgt tttaccatga tcaacatggg cgataatggc gatgttgcgt
     1141 aaatccatcg actttacact tctctcataa gcaaaaaatt ttcgaagttt tggaagtggt
     1201 ccgggctatt agaattgtcg cagaaattat aactaatttc tgaagtgacg gctgaaattt
     1261 aaaaactggc ttttttatca taattaccgt tccctagtgc cgtttattta gggtattagg
     1321 atacaataag tcagctaaaa aggcgactaa aaggcgaaat attagggaga gaattttatg
     1381 gccgccccag aaaaaatgat tccgatggct tcaccggaag ttgaggttga gaatttaggt
     1441 gatggcggtg tcattctgcg ctcacctcag ccaatcggtg agtatccaga ttcgcaaaat
     1501 gcctggcttg ttgcctgggc agaagaaacg ccagatgcca tttttgttgc cgaccggact
     1561 ggacctaatg gcgaatggcg ccgggtctct tacaaagatt ttctcactca ggtaaaatcg
     1621 atcggccaag ctttgctcaa tcgtaatttg tcggttgacc ggcttgttgc catactgtca
     1681 gataatgccg ttgacaatgc tctgctgctg tttggcgcaa tgcatgtcgg tattccagtg
     1741 gtgccaatct cgccagctta ttctctgatg tcgcaggact ttggcaaact taaatatatc
     1801 aacggtatgg tatcgcccgg cctggtctat gtcgccgatg gtgaaaagtt tggcaatgca
     1861 ctcaaagcca ttgacattgg cgaagtcgaa attgtcgtca gtgaaaattc gccgaaaacc
     1921 ggaaaatcga cactatttgg tgatctgctc gccaccgaac caacaacaga tgtagatcaa
     1981 gcttacgcca aagttggccc ggacacgatc gccaaaatac tttttacatc cggttcaacc
     2041 ggtcagccca aaggcgtgat caatacccag cgtatgttgt gctccaatca gcaagcaatg
     2101 gctcaatgct ggtcatttgt cagtgaaaag ccaccgctcg ttgtcgattg gctgccgtgg
     2161 aaccatacgt ttggcggtaa ctttgtgctc aatatgactt tgcgtaatgg cgggacgatc
     2221 tatgtcgatg gtggcaaacc ggctcctgga ataatcgagc aaaccgtggc caacctcaaa
     2281 gatatatcac cgaccatcta taacaatgtg ccgcgtgggt ttgatatgct gctaccctat
     2341 ttag
//
LOCUS       DASCNL010000154         1216 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000348203, whole genome shotgun sequence.
ACCESSION   DASCNL010000154 DASCNL010000000
VERSION     DASCNL010000154.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1216)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1216)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000348203"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(47..535)
                     /gene="nuoI"
                     /locus_tag="QF359_01975"
     CDS             complement(47..535)
                     /gene="nuoI"
                     /locus_tag="QF359_01975"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010512946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HJO85706.1"
                     /translation="MGVIDRGIRSIFLAELVSGMALTLRYFFRKKVTLNYPYEKGPLS
                     PRFRGEHALRRYPNGEERCIACKLCEATCPAQAITIEAEPRDDGRRQTTRYDIDMVKC
                     IYCGFCQEACPVDAIVEGPNFEFATETREELMYDKAKLLTNGDRWETELAARLELTAP
                     YR"
     gene            complement(557..>1216)
                     /locus_tag="QF359_01980"
     CDS             complement(557..>1216)
                     /locus_tag="QF359_01980"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HJO85707.1"
                     /translation="LGVYGILMAGWASNSKYAFLGALRSAAQMVSYEVSMGFIIISVL
                     IVAGSLNLSDIVNAQKESIWFVIPLFPIAVIFFISTLAETNRHPFDLPEAEAELVAGY
                     NVEYSSMTFALFFLGEYANMILMAGMTTILFFGGWLPPFDIAPFIWLPGPLWFIIKMC
                     MLLFIFLWVRATFPRYRYDQLMRLGWKVFLPISLAAVVIVGGVVVAFDISPLANVTVS
                     K"
BASE COUNT          331 a          333 c          286 g          266 t
ORIGIN      
        1 cttcaattct atcaatcgcg ttcagcattg gctgaatagt ctcctcttac cggtaaggtg
       61 cggttaattc caaccgcgcc gcgagttccg tttcccaacg gtcaccattc gtgagcagct
      121 ttgctttgtc gtacatcaac tcttcacggg tttcggttgc aaattcaaaa ttcggccctt
      181 caacaatcgc atcaaccggg cacgcttcct ggcaaaaacc gcaatatatg catttcacca
      241 tatcaatgtc atagcgcgtt gtctgtcggc ggccgtcatc ccttggctcc gcttcaatgg
      301 taatcgcctg agcaggacac gtcgcttcgc agagtttgca ggctatgcag cgttcttcgc
      361 cgttgggata gcggcgcagc gcgtgctcac cccggaaacg aggcgacaac ggcccttttt
      421 cataggggta gttgagcgtc acttttttcc ggaagaaata gcgcaaggtc agcgccatcc
      481 ccgagaccag ctcagcgagg aaaatgcttc ttatgccacg atcaataaca cccataatca
      541 gctctctttc cgccccctac ttacttactg tcacattggc gagcggtgaa atatcaaatg
      601 ccacgacgac accgccaacg atgacaacgg cagccaagga gatcggcagg aatactttcc
      661 agccgaggcg catcagttga tcgtagcgat agcgtgggaa agttgcgcgc acccatagga
      721 agatgaacag caacatgcac attttaataa tgaaccagag tggtcccggc agccaaataa
      781 acggcgcgat atcaaacggc ggcagccagc caccaaagaa caggatcgtc gtcatgccgg
      841 ccattagaat catgtttgca tattcaccaa ggaagaacag cgcgaaggtc atcgaggaat
      901 actcaacgtt gtaaccggcg acaagttcgg cttccgcttc cggcagatca aatggatgac
      961 gattggtctc cgccaatgtc gagataaaga aaatcactgc tattgggaac aacggaataa
     1021 caaaccagat gctttctttc tgagcattga cgatatcaga aaggttcaat gagccggcga
     1081 caattaatac cgagataata ataaagccca ttgaaacttc gtaagatacc atttgtgccg
     1141 ccgagcgaag cgcgccaagg aaagcgtatt tcgagttact cgcccaaccc gccatcaaga
     1201 tgccatacac acccag
//
LOCUS       DASCNL010000155         1367 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000348419, whole genome shotgun sequence.
ACCESSION   DASCNL010000155 DASCNL010000000
VERSION     DASCNL010000155.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1367)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1367)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000348419"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..606)
                     /gene="sucA"
                     /locus_tag="QF359_01985"
     CDS             complement(<1..606)
                     /gene="sucA"
                     /locus_tag="QF359_01985"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF027404.3"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HJO85708.1"
                     /translation="MADSTDSIFTGANAAFIAELYNWYLEDPGSVDQSWATVFADLAD
                     DKVLIQGEINGASWARSTTNVIGASDPDEAQKKTNGAAPAASAAEVNKIAQRSIRARI
                     LIRSYRVRGHLHAQFDPLGLVGAGYHRELDYKFYGFTEDDLDRKIYIDTFTSMAGKET
                     ATLGEILEVMRRSYCSSIGVEYMHIQEIEERSWIQEHVEGVD"
     gene            complement(631..>1367)
                     /gene="sucD"
                     /locus_tag="QF359_01990"
     CDS             complement(631..>1367)
                     /gene="sucD"
                     /locus_tag="QF359_01990"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HJO85709.1"
                     /translation="HLDLPVFDTVADVVEKTGANASVIYVPPPFAAEAILEAVDCEIP
                     LVVCITEGIPVLDMVEVKRVLEGSTTRLVGPNCPGVITPGECKIGIMPGHIHQRGKIG
                     VVSRSGTLTYEAVGQTTSVGLGQTTCIGIGGDPVNGTNFIDCFEMFLGDDETEGIVMI
                     GEIGGSAEEEAAEFIKSSKVKKPMIGFIAGATAPPGRRMGHAGAIIAGGKGGATDKME
                     ALRSAGINVTDSPAALGSTMLAAMKG"
BASE COUNT          345 a          384 c          309 g          329 t
ORIGIN      
        1 atcaacacct tcaacatgtt cctgtatcca gctgcgctct tcaatctcct ggatatgcat
       61 atattcgacg ccaatagagc tgcaataaga tcggcgcata acctcgagaa tttcgcccag
      121 ggtcgctgtt tctttcccgg ccatcgaagt aaaagtgtca atataaatct tcctgtcgag
      181 atcgtcttca gtaaagccgt agaatttgta atcaagctcc cggtgatagc cggcaccgac
      241 caaacctaac gggtcgaatt gagcatgcag gtgaccacgc acccggtaag accggatcaa
      301 aatacgggcg cgaatagatc gttgtgctat cttattaact tcagctgcag atgccgcggg
      361 cgctgcacca ttcgtttttt tttgtgcttc gtcaggatca cttgcgccaa tgacatttgt
      421 tgtcgagcga gcccaactag caccatttat ctcaccttgg attaaaactt tatcatcagc
      481 gagatcggcg aatacagttg cccagctttg atccaccgaa cccggatctt caagatacca
      541 gttatacaat tcagcgatga aggctgcatt ggcgccggta aaaatagagt ccgttgaatc
      601 cgccatattc tacatctcag ttaagacaat ttaacccttc atcgccgcga gcatggtact
      661 gcccaatgca gccggcgaat cggtaacgtt aataccggca ctgcgcagcg cttccatttt
      721 atcggtggcg ccacctttac caccggcaat gatcgctcca gcgtgcccca tgcggcgtcc
      781 gggaggagcc gtcgccccgg cgataaagcc aatcattggt tttttaacct tggaggattt
      841 aatgaattca gccgcctctt cttccgccga gccgccgatt tcaccaatca tgacaatgcc
      901 ttcggtttca tcatcgccta agaacatttc gaagcagtca ataaagttag tgccgtttac
      961 cggatcaccg ccgataccaa tgcacgtggt ctggccaagc ccaaccgaag ttgtctgacc
     1021 aaccgcttca taagtcagag taccggagcg ggacactaca ccgattttgc cacgctggtg
     1081 aatatggccg ggcatgatac cgattttaca ctcacccggt gtaatcacgc ctgggcagtt
     1141 ggggccaacc aatctcgtcg tcgagccttc caatacccgt tttacttcaa ccatatccaa
     1201 caccggaata ccttcggtaa tgcagaccac cagagggatt tcgcaatcga cagcttcaag
     1261 aatggcttcc gcggcaaagg gcggcggcac atagatgacg gatgcattag cgccagtttt
     1321 ttcgaccaca tcagcgaccg tatcaaacac cggtaaatca agatggg
//
LOCUS       DASCNL010000156         1185 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000350567, whole genome shotgun sequence.
ACCESSION   DASCNL010000156 DASCNL010000000
VERSION     DASCNL010000156.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000350567"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(38..1009)
                     /locus_tag="QF359_01995"
     CDS             complement(38..1009)
                     /locus_tag="QF359_01995"
                     /inference="COORDINATES: protein motif:HMM:NF014798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HJO85710.1"
                     /translation="MSNMTYAEALIDGLHGCMSEDERVSLIGSFVLGLGPQRHLVDRL
                     RNNFADRINDPPTSEAAAAAAGIGAAMAGDRPFVDIGTASFIFEAWSQITNEAANAYY
                     MSGGQIKTPVTFHMLHGLRGGGAAQHSHSPQAMLFNCPGLEIVLPASPSDVKGLIRSA
                     ILSDNPTVVIDHAKLLGLEEDVPKHDYEIPFGKANVRRRGGDATIVATSLTVQTSLEA
                     AEILSQQGIEVEVIDPRTIVPLDKEAIFSSVEKTGRLVVVDEANMSCSIASEIGMIVA
                     EEAFSFLKAPIVRVARPDVPVPFSPPLEEYIATDADKIIAAVKKVAV"
BASE COUNT          287 a          324 c          286 g          288 t
ORIGIN      
        1 gtaaagtaat tgctgttttt ttcaggatgc ggctctgtca gaccgcaact ttcttaacgg
       61 ctgcaataat cttatcagca tccgtcgcga tatattcttc aaggggtggg ctgaaaggca
      121 ctggcacgtc cggacgagct actctgacta taggtgcctt aagaaaagaa aaagcttctt
      181 cggcgacgat cattccgatc tctgaggcta tactgcaact catgttcgcc tcatccacaa
      241 ccaccagccg tccggttttc tcaaccgagg aaaatatggc ctctttgtcc aaaggtacta
      301 ttgttcgggg atcgatgact tcaacctcga taccctgttg agacagaatt tccgccgcct
      361 caagcgatgt ctgaactgtt agagacgttg ccacgatcgt cgcatcacct cctcggcgcc
      421 gaacattggc cttgccgaac ggaatttcgt aatcgtgttt gggtacatcc tcctccaggc
      481 cgagcagttt ggcgtgatcg ataactactg tcgggttgtc actgaggatg gctgagcgaa
      541 ttaatccttt tacatcgctg ggcgaagcag gcagtacaat ctctagaccc gggcagttga
      601 acaacatggc ctgggggctg tggctatgtt gcgctgcacc gcccccgcga agaccatgaa
      661 gcatgtgaaa cgttaccggt gtcttaatct ggccgccgga catgtaataa gcgttagcgg
      721 cctcgttggt aatttgagac caggcttcga aaataaaact ggcggttcca atatcgacga
      781 aaggccggtc cccggccatg gccgcgccga ttcccgccgc cgccgccgcc gcctcagatg
      841 tcggaggatc attaattcga tccgcgaaat tattgcgcaa tcgatcaacc aaatggcgct
      901 gcggtcctaa tcccaggaca aagctaccga taaggctaac ccgttcgtct tcggacatac
      961 agccgtgcaa cccgtcgatc aaagcctcag cataagtcat attactcatt cgaattcccc
     1021 atcaatacat cccaaattaa acaaagacgc cttcgagagc gctttccggc tcaggtaaag
     1081 ggctggccag ggaaaatgat tttgctacca tcattttgtc cctgatatca atatcaattt
     1141 tcgttacctc gtcgatcgag agagcgccgt cgtcaatcag gtgac
//
LOCUS       DASCNL010000157         1129 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000352298, whole genome shotgun sequence.
ACCESSION   DASCNL010000157 DASCNL010000000
VERSION     DASCNL010000157.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000352298"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="QF359_02000"
     CDS             <1..465
                     /locus_tag="QF359_02000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HJO85711.1"
                     /translation="QHDGWLPRAAMDYVADFLGISRIVAYEVATFYTMYNLEPVGKTH
                     VQVCTNLPCWLRGSDQIIEAATRNLGIEVGETTDDGMFTISAMECLGACVNAPMMQIN
                     DDYYEDLDEISTESILTELKLGQTPKTGSQIDRKSCEPIGGLTSHNSDAGSD"
     gene            465..>1129
                     /gene="nuoF"
                     /locus_tag="QF359_02005"
     CDS             465..>1129
                     /gene="nuoF"
                     /locus_tag="QF359_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HJO85712.1"
                     /translation="MLKDQDRIFTNIYGLHDPFLAGAKSRGDWDGTKDILAKGRDWIV
                     SNVKESGLRGRGGAGFGTGLKWSFMPKESDGRQHYLVVNADEGEPGTCKDREIMRHDP
                     HKLVEGCLVASFAIGANTAYIYVRGEFYRETEVLQHAIDEAYEDGLIGKNASGSGWDF
                     ELYIHRGMGAYICGEETALIESIEGKKSQPRLKPPFPANTGLYGCPSTVNNVESIAVT
                     PAI"
BASE COUNT          296 a          252 c          308 g          273 t
ORIGIN      
        1 cagcatgatg gttggttgcc gcgcgccgcg atggattatg tcgccgactt tttaggcata
       61 tcgcggattg tagcctatga agttgcaaca ttttatacga tgtataacct tgagccggtt
      121 ggtaaaaccc acgttcaagt ctgcaccaat ttgccctgct ggctcagagg ttctgatcag
      181 attatagagg ctgccacacg caaccttgga atcgaggtgg gagaaaccac ggatgatggg
      241 atgtttacga tatccgccat ggaatgtctg ggcgcctgtg tgaatgcacc gatgatgcag
      301 attaacgatg actattatga agatttggat gagatcagta ccgagtcaat tttgacggag
      361 ttaaagcttg gccaaacacc gaaaactggt tcacagatcg atcgaaaatc atgtgagcca
      421 attggtggac taacaagtca caatagtgat gcggggagcg attaatgctt aaagatcaag
      481 accgcatctt taccaatatt tacggtctcc atgatccgtt tctggctggt gcgaaatcac
      541 gtggcgactg ggacggcacc aaggatattc tcgccaaagg ccgcgactgg atcgtgagca
      601 atgtaaaaga atctggtttg cgggggcgtg gtggagcagg ctttggcacc ggactaaaat
      661 ggtcctttat gccgaaagaa tcggatggcc ggcagcatta tctggtcgtc aatgcagatg
      721 agggtgagcc tggaacttgt aaagaccgtg agatcatgcg ccatgatccg cacaaattgg
      781 ttgaaggctg tttagtcgcg agcttcgcca ttggcgccaa cacggcttat atatatgtcc
      841 gaggtgagtt ctaccgtgaa accgaagtgc tccaacacgc catcgatgaa gcttatgagg
      901 acggcctgat cggtaaaaat gccagcggtt ccggatggga ttttgaactc tatatccacc
      961 gtggtatggg cgcttatatt tgcggcgaag aaaccgccct gattgaaagc atcgaaggta
     1021 aaaaaagcca gcctcgcctg aagccgccat tcccggcgaa tacgggactt tatggctgcc
     1081 catcgacagt aaacaatgtc gaatctatcg ccgttactcc agcgatatt
//
LOCUS       DASCNL010000158         4536 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000352873, whole genome shotgun sequence.
ACCESSION   DASCNL010000158 DASCNL010000000
VERSION     DASCNL010000158.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4536)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4536)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4536
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000352873"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /gene="cobW"
                     /locus_tag="QF359_02010"
     CDS             complement(<1..910)
                     /gene="cobW"
                     /locus_tag="QF359_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CobW"
                     /protein_id="HJO85713.1"
                     /translation="MALAVKTPVTVITGFLGAGKTSLIRHMLENANGRKLALIINEFG
                     DLGIDGDILKGCGDETCSEDDVMELTNGCICCTVADDFIPTLETLLDREDRPDHIVIE
                     TSGLALPKPLVKAFQWPEVRSRTTVDGVITVVDGPAVKSGLFADDPELIKKQRAADPT
                     LDHENPLEEVFGDQLACADMVIVSKSDMLEEGELDSVLDLINEEARTSVEAIPAIHGR
                     LDPGVILGLDAAVEDDVDARPSCHDDEEEHEHDDFDNFTLDIEVAANTNVIIERVKQA
                     LTEEGVLRIKGTLVIQDKPARLIVQGV"
     gene            complement(913..1455)
                     /gene="cobU"
                     /locus_tag="QF359_02015"
     CDS             complement(913..1455)
                     /gene="cobU"
                     /locus_tag="QF359_02015"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019646795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HJO85714.1"
                     /translation="MGDLINLQKAGYSLVLGGARSGKSTYAESVIENVGGGFYIATSE
                     ALDEEMAARIAVHRERRGDDWQTLEEPVLLQHALLSIKGRGKPALVDCLTLWLSNLME
                     LEKNIEAEIDGLCALAEELDYPVVFVSNEVGQGIVPDNALARRFADCAGLMNQKIAAA
                     ANTVVLVTAGIPQKLKIGSK"
     regulatory      complement(1495..1684)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(1705..2289)
                     /locus_tag="QF359_02020"
     CDS             complement(1705..2289)
                     /locus_tag="QF359_02020"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HJO85715.1"
                     /translation="MITTRWWWVRHAPSASSPGIIHGQDDVDADLSDQAAIDARRHSL
                     PEDAVWLTSGLNRAVQTAAALGGTECRVVPGLMEQNFGEWNGKAWDIMDKAEARAFWE
                     DYTTEAPPGGESVVHLMDRVSDAVAELSHEYQGQDIIAVAHAGSIRSAVAMALNLFAK
                     SALSIQIDNLSLTRIDCLYDEESGPSWRVMGLNL"
     gene            complement(2286..3173)
                     /gene="cobS"
                     /locus_tag="QF359_02025"
     CDS             complement(2286..3173)
                     /gene="cobS"
                     /locus_tag="QF359_02025"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HJO85716.1"
                     /translation="MADKKENIDADDQDEGLESEVVSDLAPDEDDFFGRMKSSVNRQG
                     WFADLKICLGVLTRLPVYIGVSPEDFSISEASRFFPVVGALIGLIAGLVLWIGSWFEF
                     PSMVLALFALLAMTLVTGALHEDGLADTFDGLGGGTTREQKLLIMRDSQIGSYGVMAL
                     LFGFGLRWAALSEITEIGIDAAIYALIAAAAASRAALPGIMHYIPVAQEDGLSAGAGK
                     PSFDRAIVATLIGVAFLLFLLGFQASIVALGLAVLVTGLFVYFVATRIGGQTGDVLGA
                     TQQIAETTILLVIVMVGLE"
     gene            3264..4286
                     /gene="cobT"
                     /locus_tag="QF359_02030"
     CDS             3264..4286
                     /gene="cobT"
                     /locus_tag="QF359_02030"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008939 -
                     nicotinate-nucleotide-dimethylbenzimidazole
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HJO85717.1"
                     /translation="MKQKPITSLDAIRELIQSFPGPDEDAITATREREPNLTKPQGSL
                     GRLEELVEWLAGWQGNHPPKIELPRVIVFAGSHGVTAQGVSAFPAEVNQQMTANFQGG
                     GAAINQLCKVQDAELNVMEAALEIPTRDFSEEPAMDDADCAEAVAFGMSGPNVGLDML
                     CLGEMGIGNTTASAAICHALYGGDAAHWVGPGTGVEGDALTNKIRVVEESVILHKAVL
                     TDGLEILRCFGGREMAAICGAIISARLSRIPVVLDGYVACAAAAVLHTLDEHALDHCL
                     VAHVSAEPGHRHLIEKLGKEALFDFGMRLGEASGAALSISILRSAAACHSGMATFEEA
                     AVSNKN"
BASE COUNT         1132 a         1278 c         1068 g         1058 t
ORIGIN      
        1 ctaccccttg aacgatcaaa cgcgcaggtt tgtcttgaat tactaaggtg cctttgatcc
       61 ggagcacacc ctcctcggtc agcgcttgtt taacccgttc aataatcaca ttggtattag
      121 ccgcaacttc aatatcaagc gtgaaattat cgaaatcgtc atgctcatgc tcttcttcat
      181 cgtcatggca ggacggccgg gcatcgacat cgtcttcaac cgccgcatcg aggcccaaaa
      241 taacacccgg atcaaggcgg ccatgaatag ccggaatggc ttcaacagag gtgcgcgctt
      301 cttcattaat aaggtcgagc acgctgtcca gctcaccctc ctccagcata tcagatttgc
      361 tgacaatcac catgtcggca caggccagtt ggtcaccaaa cacctcttcc agggggtttt
      421 cgtgatcgag ggttggatca gccgcccgct gttttttgat cagttccgga tcatcagcaa
      481 acaagccgga ttttaccgcc gggccatcga ccaccgtaat gacaccgtcc accgtcgtcc
      541 gcgaccgcac ttccggccat tgaaacgctt tcaccagagg tttcggcagg gccaagccag
      601 aggtctcaat gacgatatga tcgggccggt cttccctatc cagcaaagtt tcgagcgttg
      661 gaataaaatc atcggcgacg gtgcaacaga tgcagccatt ggtcagctcc attacatcat
      721 cttcactaca tgtttcgtca ccgcagcctt tgagaatatc accatcgatg ccgagatcac
      781 caaactcgtt aatgatcagc gccagcttcc ggccgttggc attttccagc atgtgccgga
      841 tgagactggt tttacctgcg cctaaaaagc cggtgatcac ggtgacaggt gtttttacag
      901 caagagccat atttatttac ttcctatttt taacttttga gggatgccgg ccgtcaccag
      961 gacaacggtg ttagcagcag ccgcgatttt ttggttcatc agcccggcgc aatcggcaaa
     1021 acggcgcgcc aaagcgttat ccgggacaat accctgcccg acttcgttcg aaacaaacac
     1081 aactggataa tccagttctt cggccaaagc gcaaagccca tcgatttcag cttcaatatt
     1141 tttttccagt tccatgagat tagagagcca cagcgtcaaa caatcaacca atgccggttt
     1201 accccggcct ttgatcgaca ataaagcatg ttgcaataaa accggttctt ccaaggtttg
     1261 ccagtcatca ccgcgccgtt cccggtggac ggcgatgcga gcggccatct cctcatccag
     1321 cgcttctgat gtggcaatat aaaacccacc accaacattt tcgattacac tttcggcata
     1381 ggtgcttttg cccgagcgcg ctccaccgag caccaatgaa tatcccgctt tttgaagatt
     1441 tatgagatcg cccatactaa acgcagccct cctccccgag gatatagttt tactcaaatt
     1501 accgctggag aggtctcctg gctggggctt ttgatttggt ctaaccttcc cagccaattg
     1561 tcagtcctgg ccagtggttg cttgtcaaag caaagatcaa atccgtccgt cacagttgcg
     1621 ggggcagcac cggatttaca ccggattccc tgtcccaacg gcaaggggcg acgctatcat
     1681 tttggtcctt ggatggcaaa gcatttacag attgagaccc ataacccgcc agcttggccc
     1741 gctttcttca tcatacaggc aatcgatgcg agtcagcgac aagttatcta tttgaataga
     1801 cagggcagat ttggcaaata aattcagtgc catcgccacg gcagagcgaa tcgatcctgc
     1861 atgagcgacg gcaataatat cctgcccttg gtattcatga gagagctcgg caaccgcatc
     1921 agacacccgg tccatcaagt gaacaacgct ctcacctccg ggcggcgctt cggttgtgta
     1981 atcctcccaa aacgcccggg cttcagcttt atccatgata tcccaggcct tgccgttcca
     2041 ctcgccaaaa ttttgttcca tcagaccggg gaccacacgg cactccgtgc cacccaaggc
     2101 cgccgccgtt tgcaccgctc gattaagccc actggtgagc cagactgcat cttcgggcag
     2161 gctatgacgg cgcgcatcaa tcgccgcctg atccgagaga tcagcatcga catcatcttg
     2221 accatgaata ataccgggtg agctggcgga aggcgcatga cgcacccacc accatctagt
     2281 tgtgatcatt caaggcccac cattactatt accagcagga tcgttgtttc ggcgatttgc
     2341 tgagtggcac ccaagacgtc ccccgtttga ccgccaatcc gcgtcgccac aaaataaaca
     2401 aacaagccgg tcaccagtac agccagaccg agggcaacaa tgctggcctg aaacccgagc
     2461 aggaagagta gaaaagcgac accaatcaag gtggcaacaa ttgcccggtc aaagctcggc
     2521 ttacccgcac cggcgctcaa accgtcctcc tgggcgaccg ggatataatg cataatgccc
     2581 ggcaaagcag cgcgcgacgc agcagcagca gcaatgagcg catagatggc ggcatctatt
     2641 ccgatttcag taatttctga caacgcagcc caacgcaaac caaatccaaa tagcaaagcc
     2701 ataacaccgt agctgccgat ttgactgtcc cgcataatta aaagtttttg ctctcgggtt
     2761 gtgccgccgc cgagaccatc aaaagtatct gccaacccat cttcatgcag cgcgccggtt
     2821 accagtgtca tcgccagcag ggcaaatagc gccaacacca tagacggaaa ttcaaaccag
     2881 ctgccgatcc acaacaccaa gccggcgatt aatccaatca gcgcaccgac aaccggaaag
     2941 aagcgggaag cttcagagat cgagaaatct tcgggcgata ccccaatata aaccggcagg
     3001 cgcgtcaaca cgcctagaca gattttaagg tcggcaaacc agccttgccg gttgacgcta
     3061 cttttcatcc ggccgaagaa atcatcctca tccggtgcaa gatcagaaac aacttccgac
     3121 tctaggcctt catcctgatc atctgcgtct atattttcct ttttatcagc caaaattagc
     3181 ctctcgccgt tttttgcttt cgtgtagcaa cctggcatta tattacaggc ctattacaat
     3241 tttagaatat catgggatgc tacatgaaac aaaagccaat tacctctctg gatgcgatcc
     3301 gggagcttat tcaatctttc cctggaccgg atgaggacgc cattacggca actcgcgaac
     3361 gagagccgaa cctgacgaaa ccccaaggct ccttgggtcg cctcgaagaa ctcgttgaat
     3421 ggctggctgg ctggcagggt aaccatccgc ctaaaatcga gctgccgcga gtgattgttt
     3481 ttgccggctc tcacggcgta acggcgcaag gcgtttccgc ctttcctgcc gaagtgaacc
     3541 agcaaatgac ggcgaatttt caaggcggcg gcgctgccat caatcagctt tgcaaagtcc
     3601 aggacgcaga actgaacgtc atggaagcag ctcttgagat accaacccgt gacttttcag
     3661 aagaaccggc aatggacgat gccgactgcg ctgaagccgt cgcttttggc atgtccggtc
     3721 cgaatgtcgg actagacatg ttgtgcctcg gtgaaatggg aattggtaat acgaccgctt
     3781 cagccgccat ttgccatgca ctttatggcg gcgacgcagc ccactgggtt ggtcccggca
     3841 ccggtgtcga aggcgatgca ctaacaaata aaatacgcgt tgttgaggag agtgtaattt
     3901 tgcataaagc cgtgctgacc gatggacttg aaattctgcg ctgcttcggt ggccgtgaaa
     3961 tggcagccat ctgcggtgcc attatctctg ctcgcttgtc acgtattccg gtcgtgctag
     4021 atggttatgt tgcctgcgcc gccgcagctg tgcttcatac cctagatgaa cacgcgcttg
     4081 atcattgtct ggtagctcat gtttcggcag aacccggcca tcgccacttg attgagaagc
     4141 tcggcaaaga agcactgttt gatttcggca tgcgcctagg cgaagcgtcg ggggcggcgc
     4201 tgtcgatcag cattttacgc agtgccgccg cctgtcatag cggcatggca accttcgaag
     4261 aagcggcggt ttcgaataaa aattaataaa taactgctat ggccaatcaa gcgtagattg
     4321 ataaaataaa tacgaataac gctttcctag ttggtgcgtt tttattgagg tattttattg
     4381 tttaaaatca acgtagcata gtattcattg tcccatgata acacctaaat agcgttacct
     4441 gggtcagcct ctaatttttt ttacccaaga ttaaactgcg tatttgtcca atattttgat
     4501 cattattcag agaatgatgc cgacaatcta atgccc
//
LOCUS       DASCNL010000159         3404 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000356765, whole genome shotgun sequence.
ACCESSION   DASCNL010000159 DASCNL010000000
VERSION     DASCNL010000159.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3404)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3404)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3404
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000356765"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(63..1274)
                     /locus_tag="QF359_02035"
     CDS             complement(63..1274)
                     /locus_tag="QF359_02035"
                     /inference="COORDINATES: protein motif:HMM:TIGR00710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HJO85718.1"
                     /translation="MVKKITTSGKALLFLTIILGFLNMLGPIGIDMFLAGVPNIAEGL
                     GSTPNRVIASISTVMLGNAVGQLVLGPASDRFGRKPIILLTLFLFAGAALASGLSPSI
                     EYLIFWRFIQGLAISGGRILAAAVARDLFDREQLGKMMADILFVTSLAAIMFPIIGGQ
                     IAQYLPWQWLFWTMTLSGTLVFLLFKFFYQETIEQRNPKALWPNYLLTNWLATVQNPV
                     FVRYVLCSSFSMAGFGAFLGTSPTVLRGAFGVSAVTYGFLYSIIAGFFLVATFIGGRF
                     LLAIGQQRIIAIGVLIMLVGGIVLTALAIIDIRHPLAVIMPSAFFVLGLGLVFPQTNS
                     LALQPFPQSAGTAASLMGFITNLFMAGVIIVLAAMTHTTALNLAIAILLSGFLSCVTY
                     FFIIRPAEKKR"
     gene            complement(1336..1578)
                     /locus_tag="QF359_02040"
     CDS             complement(1336..1578)
                     /locus_tag="QF359_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85719.1"
                     /translation="MRTILMLLFMSFVFIAPTSSFAAEKKDSSVSDKAVTVVEKNPGV
                     SVGVAACGVSVAFFPPALLVCGGAIAAGAGVDHVSK"
     gene            complement(1646..2266)
                     /locus_tag="QF359_02045"
     CDS             complement(1646..2266)
                     /locus_tag="QF359_02045"
                     /inference="COORDINATES: protein motif:HMM:NF019958.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJO85720.1"
                     /translation="MKDKYRQRQTEIFDAAAAVFAKKGYHGASTSDIAAELGVAQSSL
                     YYYFKSKDEALEKVCLHSIKGYVERLQAIVAIDLPADVKIRDAIHNHIEPVNYIPDYF
                     RVFVGELRYLASNRRQKLNNMIAEYNALFEQILADGVTDGFFIKGLDCHSTMLMLIAQ
                     CNTVPFWFGKFEHYSMDQLANMLADNFLLGALPRANKLNSILGEPP"
     gene            complement(2310..>3404)
                     /locus_tag="QF359_02050"
     CDS             complement(2310..>3404)
                     /locus_tag="QF359_02050"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HJO85721.1"
                     /translation="LMIEGTPEIDNPPVGSDPFLLLYTSGTTSNPKGVPLTYQNMMSN
                     ARVSVDEFKMTPADCNLSAAPFSHLYGLFNFHVALNAGATNVLLPAFTPPDLAKMVEA
                     TKATTLFLGPAHATAMINAGLMDTHDFSSVRFSVFSGAACPQPMMKTYRDKIPGTRIS
                     QLWGMTETAGATYCRFDDAEDIPVRSAGRASPGDEVRVVSPEDGEPLPANTEGDLQVR
                     GCSVFPGYLNNEEANADAFTEDGWFRTGDIAIIDGDGNITITGRTKDVINRGGVKFNP
                     ADIEDLLVQHPKVEMVAIVPVPDSALGEKACCVVTLLGEVAVTLEELCILLDEHKIAK
                     NKWPERLEIIDEMPLTPTRKVIKGRLMDQL"
BASE COUNT          939 a          845 c          871 g          749 t
ORIGIN      
        1 tccgaccaag caagtttcat gaccggcgag accatgcacg ttaatggcgg ttcgaatttc
       61 ggctagcgct tcttttcagc tgggcggatg atgaaaaaat aggtcacgca ggaaaggaaa
      121 ccgctgagca aaatggcgat ggccaggttc agcgcggtgg tatgggtcat ggccgcgagc
      181 acgatgatga cgccggccat aaacaagttg gtgataaagc ccatgagcga ggcggcggta
      241 ccagcggatt gcggaaaagg ctgtagcgcc agggaatttg tctgtggaaa taccaaaccc
      301 aagcccaaaa caaaaaatgc tgacggcatg attaccgcta aaggatggcg aatatcaatg
      361 atggccagtg ctgttagaac aattccaccg acaagcataa tcagcacgcc aatggcaata
      421 atgcgctgtt ggccgatcgc taataaaaaa cgtccgccaa taaaggtggc gaccagaaag
      481 aagccggcaa ttattgaata caaaaaacca taagttacgg cgctgacgcc aaaggcgccg
      541 cgcagcaccg tcggagaagt gccgagaaaa gcgccaaagc cagccattga gaacgagctg
      601 cataaaacat agcggacaaa aaccgggttc tggacggttg ccagccaatt ggttaaaaga
      661 tagtttggcc aaagtgcctt agggttacgc tgctcaatgg tttcctgata aaagaactta
      721 aatagtagaa atactagggt gccagaaaga gtcatggtcc agaacagcca ttgccagggt
      781 agatattggg caatctggcc gccgatgatc gggaacatga tggcggcgag cgaagtgaca
      841 aataatatat cggccatcat tttgccgagc tgctcgcgat caaataaatc acgcgcgacg
      901 gcagcggcca atatgcggcc gcccgatatg gcaaggccct ggataaagcg ccaaaaaatc
      961 aaatactcga ttgatggcga aagccctgaa gcaagagcag cgccggcgaa caaaaaaagc
     1021 gtcagcagaa tgataggctt gcggccaaag cggtcagacg ccgggccgag cacaagctgg
     1081 ccaaccgcat ttcccagcat aaccgtggat atggacgcaa tcacccgatt gggtgtagag
     1141 ccgagccctt cggcaatatt gggcacgccg gccaaaaaca tgtcgatgcc gattggccct
     1201 aacatgttta aaaagcccaa tattatcgtc aggaataaga gcgctttacc gcttgttgtt
     1261 atttttttta ccatgaattc atataaaaag gccggtggcg cttggccacc ggcccattat
     1321 caatatttaa acgctttatt tactgacgtg atcgacgcca gctccagcag caatcgcacc
     1381 gccacaaact aataatgccg gtggaaaaaa ggcgacggaa acaccacaag cggcaacgcc
     1441 aaccgataca cctggatttt tttcaaccac cgtaacagct ttgtccgaga ccgaagaatc
     1501 cttcttttcc gcggcaaaac tactggtcgg ggcgataaag acaaatgaca taaacaaaag
     1561 cattaagatc gtgcgcattt tcaaactcca acataggtag tgaaaaaata aaccatttaa
     1621 acccaacagc tcatcatacg gtgattcaag ggggttcgcc aaggattgag tttaacttat
     1681 ttgcacgtgg cagagctcct agcagaaaat tatcggccaa catgttagcg agttggtcca
     1741 tactatagtg ttcaaatttg ccaaaccaga aaggaactgt gttgcattgg gcaatcagca
     1801 tcagcattgt cgaatgacaa tcgaggcctt ttataaaaaa gccatccgtg acaccatcgg
     1861 ccaaaatttg ttcaaacagc gcattatatt cggcaatcat gttgttgagt ttctgacgcc
     1921 ggttactcgc caggtatctc aactcgccga caaacacccg gaaatagtcg gggatgtaat
     1981 taaccggctc aatatgattg tggatggcgt cacggatttt aacatcggcc ggtaggtcga
     2041 tggcgacgat agcctgcagg cgttcaacat agcccttaat gctgtgcaaa catacttttt
     2101 ccagggcttc gtctttggat ttgaaatagt aataaaggct gctttgggcg actccgagct
     2161 cggcggcaat atcactggta gaggcgccgt ggtagccttt tttggcgaac acagcggctg
     2221 cggcatcgaa aatctcggtc tgccgttgcc ggtatttatc tttcattttt cctggtttag
     2281 ctgcgccgtc gggcatcgca catattcgat cacagttggt ccatgagccg gcccttaatt
     2341 actttacggg tcggtgttaa cggcatttca tcaataatct caagacgttc cggccatttg
     2401 tttttggcaa tcttatgctc atccagcaat atgcaaagct cttccagggt aaccgctact
     2461 tcacccagca gggtaaccac acagcatgct ttctcaccca aagccgaatc aggcaccggg
     2521 acaatggcca ccatctcgac ttttggatgc tggaccagca aatcttcaat atctgccgga
     2581 ttaaatttaa ccccgccgcg attgataacg tccttggtcc gtccggtgat ggttatattg
     2641 ccgtcaccgt cgataatggc gatatcaccg gttctaaacc aaccatcttc tgtaaaggca
     2701 tcggcattgg cttcttcgtt gttaaggtag ccgggaaaaa ccgagcagcc gcggacttgt
     2761 aaatcgccct cggtattggc cggcagcggc tcgccatctt ccggcgaaac cacccgtact
     2821 tcgtcaccgg gagaggcacg cccagccgag cgcacgggaa tatcttcagc atcgtcaaaa
     2881 cggcaatagg tggcaccagc ggtttcggtc atcccccaga gctggctgat gcgggtaccc
     2941 ggaatcttgt cgcggtaggt tttcatcatc ggttgtggac aggccgcccc ggagaacact
     3001 gaaaatcgaa cagatgagaa atcatgtgtg tccatcaacc cggcattgat cattgccgtc
     3061 gcatgggcgg gtccgagaaa caatgtcgtt gccttggtcg cttcgaccat tttagccaga
     3121 tcaggcgggg taaaggccgg caacagcaca tttgtagctc cggcattgag cgcgacatga
     3181 aaattaaaca gtccatagag atgactgaac ggggcggccg ataaattgca gtcagcgggc
     3241 gtcatcttaa attcatctac gctgacccgg gcattgctca tcatgttttg ataagttagc
     3301 ggcacgccct tggggttgga ggtcgtgccc gaggtgtaaa gcaggaggaa cggatcagag
     3361 ccgaccggtg gattatcaat ctcaggtgta ccctcaatca tcag
//
LOCUS       DASCNL010000160         2724 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000357771, whole genome shotgun sequence.
ACCESSION   DASCNL010000160 DASCNL010000000
VERSION     DASCNL010000160.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2724)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2724)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2724
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000357771"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..193
                     /locus_tag="QF359_02055"
                     /pseudo
     CDS             1..193
                     /locus_tag="QF359_02055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611857.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            451..594
                     /locus_tag="QF359_02060"
     CDS             451..594
                     /locus_tag="QF359_02060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85722.1"
                     /translation="MNKLWVVAASFIGAIFLIWQFTYNNENYFPNYQKNHVYGFLKWT
                     QLE"
     gene            819..1817
                     /locus_tag="QF359_02065"
     CDS             819..1817
                     /locus_tag="QF359_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HJO85723.1"
                     /translation="MSLPAKMSAIDIKEPGGPEVLVPVTVPVPTIGPEEILINNEAVG
                     VNRPDVAQRTGHYPVPPDANPLPGLEIAGEVVAVGDKASDWKIGDKAMGLTHGGAYAE
                     YTAVHHSHCLPWPNGYDAQMAAAIPENFYTVYYNVFMRSDLKVGEYFLVHGGSSGIGL
                     AAIQLAKAKGAKVITTAGSTEKCQFCLDQGADKAINYKEEDWAEIAKDFTEGHGIDVV
                     LDMVTGDYVQKEIDIMARDGRIALIAFLGGPKAEINFGPVLRDRLTISGSTLRPQTTG
                     EKALIASNLQRDFSADMDASKIKPHIYKTFPLEQASDAHALMESSAHMGKIILTIG"
     gene            1833..2516
                     /locus_tag="QF359_02070"
     CDS             1833..2516
                     /locus_tag="QF359_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HJO85724.1"
                     /translation="MIDKTVATIEEAVAGIQDGATLMVSGFGEAGAPVQLMEAVIEQG
                     ASDLTVISNNAGEAYHGLAKLVQEKRVAKVICSFPTAAKKAVIKDLYAAGEIQLEIVP
                     QGTLSERIRAGGAGIGGFYTPTSFGTKLAEGKEIRQFDGQDYVLEFPLFADFAFIKAY
                     QADRWGNLTYDKSARNFGPSMAMAGNTTVVQVNKIVKLGELDPESVVTPGIFVDRVVK
                     LDSPNLISD"
     gene            2520..2711
                     /locus_tag="QF359_02075"
     CDS             2520..2711
                     /locus_tag="QF359_02075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85725.1"
                     /translation="MANVVLVHGMRAGGWLWHEVTDQICNAEHEVFTPTLTGLGVRAH
                     LLTADINLETHIMDILKRY"
BASE COUNT          708 a          616 c          718 g          682 t
ORIGIN      
        1 gggttcttcg tccgagaaga cagtcaaaga catccaccgg gctacccgca agcagtattc
       61 agccgaagag aagatccgta ttgttttaga cggccttcgc ggcgaagaga cgattgccga
      121 gctatgccgg cacgaaggca ttgcccagag tttatattac agctggtcca aggagttcct
      181 ggaggcgggt aaaggacgtg gcgcatgtga gtgatggcgt gagttttatg aaatgctggc
      241 tgacggcgcg ctagcaggac gtagaatccc aactcagcca taaagtgtta cctctccaaa
      301 gacctccaat ggacatggtg acgaaatgca tttcaagcca caacaacttc ccattgctgc
      361 cacaattccg tcatcaaagt gggattatta agcactaggc ttcacaacga ttgtgatcgc
      421 taatcgtatt attgaacggg gaattacttg atgaataaat tatgggttgt cgctgcatcc
      481 ttcattggtg ccatttttct gatctggcaa tttacctaca acaatgaaaa ttattttccc
      541 aactatcaaa aaaaccacgt ctacggcttc ttaaaatgga ctcagttgga ataaaatcct
      601 aacgtaaccc agacaccact atcaaaaatc ctaataagat ttgcttggct tatcgaaata
      661 tttgctgtga tcaccggtct attcataagt ctaatgattg ctgccacaac ctatgaaaat
      721 gcctaacatc aacgccctta ggacatattg aggggttttc ataaagaagg atttctggtt
      781 tatcgtgtac cctgagtgta caatagaaag aaattaccat gtcacttccc gcaaaaatgt
      841 cagcaattga tattaaagag cccggtggtc cggaagtttt agttccggta acggtaccgg
      901 tgccgactat tgggcctgag gaaattctca tcaataatga ggcggtcggc gtaaaccggc
      961 cggatgttgc gcagcgcact ggtcactacc cggtgccgcc ggatgctaac ccgttgccgg
     1021 gcttggaaat tgccggtgaa gttgtggcgg ttggtgataa agcgagtgac tggaaaatcg
     1081 gcgataaagc gatggggctg acccatggcg gggcttatgc ggaatatacg gcagtccatc
     1141 attcccactg tttgccgtgg cccaacggct acgatgccca aatggcggcg gcgatcccag
     1201 aaaattttta cacggtctat tacaacgttt ttatgcgttc cgatctgaag gtaggggagt
     1261 attttctggt tcatggcggc agtagcggta tcggtttagc tgctattcaa ttggctaaag
     1321 ccaagggcgc caaagtaatt acgacagcag ggtcaaccga aaaatgtcaa ttttgtctcg
     1381 atcaaggcgc cgacaaagcg atcaattaca aagaggaaga ttgggcggag atcgccaagg
     1441 atttcacgga gggtcatggc attgatgtag ttttagatat ggtaacgggt gattatgtcc
     1501 aaaaagaaat cgatatcatg gcccgggacg gccgcattgc cttaatcgct tttttgggtg
     1561 gcccgaaagc cgagatcaat tttggcccgg tgttgcgtga ccggctgaca atttccggct
     1621 cgacgctccg gcctcaaacg accggggaaa aagcgttgat agcatcgaac ctccagcgtg
     1681 actttagtgc agatatggat gccagcaaga ttaagccgca tatctataaa acctttccgc
     1741 ttgaacaagc ctccgatgct catgcgctga tggaaagcag cgcgcatatg ggcaaaatca
     1801 ttctaacaat cggttaagct gggggggctc aaatgattga taagacagtt gcgacaattg
     1861 aggaggcggt tgccggtatt caggacggcg ccactttgat ggtcagtggc tttggtgaag
     1921 ccggtgcccc ggttcaactc atggaagcgg ttattgagca aggcgccagt gatctcacgg
     1981 taatctctaa caatgccggt gaggcctatc atggtctggc aaaattggtg caggaaaagc
     2041 gtgtcgccaa ggtaatttgc tcttttccga cagcggcaaa aaaggctgtc attaaagacc
     2101 tctatgccgc cggtgaaatc caacttgaga ttgtcccgca aggtacactc agcgaacgta
     2161 ttcgagctgg tggtgccggg atcggcggct tttatacacc gacttcattc ggcactaagc
     2221 ttgccgaggg taaggaaatc cggcaattcg acggtcaaga ctatgtgctt gagtttccgt
     2281 tatttgccga ctttgctttt atcaaagcct atcaggctga ccgctggggt aatctcacat
     2341 acgataaatc ggcccgcaat tttggtccct cgatggcgat ggcggggaac accacggtgg
     2401 tgcaggttaa caaaatagtt aagcttggtg agcttgatcc ggaaagcgtc gttacccccg
     2461 gcatttttgt cgaccgggtg gttaaactcg attcaccaaa tcttatttcg gattgaggta
     2521 tggctaatgt tgtgctcgtt catggcatga gagcaggcgg ctggctgtgg cacgaggtta
     2581 ccgatcaaat ctgcaatgcc gagcatgaag ttttcacccc gactttgacc gggcttggcg
     2641 tgcgggcgca tttattgacg gctgatatca accttgaaac ccacatcatg gatatactca
     2701 agcgttattg actgtgaaga attg
//
LOCUS       DASCNL010000161         2021 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000359168, whole genome shotgun sequence.
ACCESSION   DASCNL010000161 DASCNL010000000
VERSION     DASCNL010000161.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000359168"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="QF359_02080"
     CDS             complement(<1..190)
                     /locus_tag="QF359_02080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85726.1"
                     /translation="MSRFKSLYFLLLFLTIILVFPETVNAQDTHRIGLCVPITGSGAD
                     AGKREVIGAQVAVNEINAK"
     gene            complement(638..1672)
                     /locus_tag="QF359_02085"
     CDS             complement(638..1672)
                     /locus_tag="QF359_02085"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJO85727.1"
                     /translation="MKFGLWDHVDQSDLPLAELFDKRLEYVAAADKAGFYCYHVAEHH
                     ITPLNMVPAPSVYLGAVARVTKQIRMGPLVYLLPLYTPLRLIEEISMLDHLSHGRLDV
                     GVGRGISPYELEHFPVNFETGREVMFESLDVIIKGLTNERLNHAGEYFTYNDAPMELR
                     PLQQPHPPIWYGSSSEVGSEWAGDTGLNFVTLGSMAQAKQCVDTYKEAYAKRGAPAIP
                     GDNFPGGTAIGVVRHLVIADSVEEAVAVGKPAYDHWYASLTKLQRNHVAGPVIAKSMF
                     EDVNEAVEKGLVLVGPPDAICEQLESQIEELGINYMTLGFYFGTLPHTKVMRSLELFA
                     SEIMPKLSHL"
BASE COUNT          525 a          484 c          497 g          515 t
ORIGIN      
        1 ctttggcatt aatttcgttg accgcaactt gagctccaat tacctcgcgt ttgcccgcat
       61 cagcgccact accggtgatt ggaacacata atcctattcg gtgggtatcc tgagcgttta
      121 cggtttcggg aaataccaaa atgatggtca aaaataataa aagaaaataa agcgatttga
      181 atcgtgacat tttaagcctc caaaaaaaaa attttaggtt tttagtaggt taagtaatta
      241 tcgttgttct tagacaagac aacacatttt gcaacaatta cgaaaatgcc atcagagcct
      301 atgtgcttaa gaatttgttg taattgatcc gagtcaattc cttgacgggg cactgtcaga
      361 gtaaattgag ctaatcgcaa agggcaatta tgggcaactc tcaaatcgcg agattacgcc
      421 atccggtcaa agccgcagaa tggttgactt tgaatgttct gtgatcgtag agatgacgtt
      481 cgtgattgaa gtaaatttct gatgatgttt taaaatatcg gaaaggattt tttatccaaa
      541 acattatgaa aatactgcga actggtcaaa ggtgatttta gtctgacagt gcccccgccg
      601 acgcctactt cgggcgtatg aaactttcta cagccgttta gagatggcta agcttcggca
      661 tgatttcact ggcgaaaagt tcgagcgaac gcattacctt ggtgtgcggc agagtaccga
      721 aatagaagcc gagggtcatg tagttgatac ccagctcttc tatctggctc tcaagctgtt
      781 cacagatagc gtctggcgga ccgaccagaa ccaagccttt ttccaccgcc tcattgacat
      841 cctcaaacat gcttttggcg ataaccgggc cggcgacgtg gttgcgctgt aacttggtca
      901 agctggcata ccaatggtcg taggccggct taccgacggc tacagcttct tcgactgaat
      961 ctgctatcac caggtgacgg acaacgccga tggcagtgcc gcctggaaaa ttatcgcccg
     1021 gtatggctgg tgcgccacgt ttggcgtagg cctctttata agtatcaaca cattgtttcg
     1081 cctgcgccat tgatcccaag gtgacgaagt taagtccggt gtcgcccgcc cattccgagc
     1141 cgacctcgct ggatgagcca taccagatcg gtgggtgggg ttgctgcaac ggccgcaact
     1201 ccatcggggc atcgttgtag gtgaagtatt cgcccgcatg gttaagccgt tcgttggtca
     1261 ggcctttgat gatgacatcg agtgattcga acatcacttc gcgcccggtt tcaaaattca
     1321 ccgggaaatg ttcaagctcg taaggcgaga taccgcgacc gacgccgaca tcgagccggc
     1381 catggctgag atggtcaagc atgcttattt cttcgatcaa gcggagcggc gtatagagcg
     1441 gcaatagata gaccagcggc cccatacgta tttgctttgt cacccgcgcc acggcgccca
     1501 gataaacact cggtgcaggc accatgttga gaggcgtgat gtggtgttcg gcgacatgat
     1561 aacaatagaa accagcttta tcagccgcgg cgacatactc aaggcgcttg tcgaacaact
     1621 cggccaatgg taggtcggat tggtcaacat gatcccaaag accaaatttc atgattaaac
     1681 cctccaggtt ggcagaccct taaaagtgtt tcttctcggc agggtaaacc aatgcactct
     1741 cgttttcggc ccctgcgtaa ttaccccgat cgccagatgc agccgggcgt cagttttttg
     1801 tcttggcaat tgatttccta cacatcagca tattggattt agcggcgcgt cgatttgatc
     1861 tgcgtcaata tggcctgatt cagattacag caagatgctc ggtgatcaga gaagaacaag
     1921 tgctatctgc aggaaaatca cgatcaaaat cagtaccacc gaaatcatta atgcgaaggg
     1981 cgctgcaccg tagaaaatat cacctactgt tatgctgtca t
//
LOCUS       DASCNL010000162         4612 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000369569, whole genome shotgun sequence.
ACCESSION   DASCNL010000162 DASCNL010000000
VERSION     DASCNL010000162.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4612)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4612)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4612
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000369569"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(24..641)
                     /locus_tag="QF359_02090"
     CDS             complement(24..641)
                     /locus_tag="QF359_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecX family transcriptional regulator"
                     /protein_id="HJO85728.1"
                     /translation="MVEDFMRLKNLKELSKRKKIPRKATPKSLENAALYYLQRFSSSS
                     ENLRRVLMRRVQRSAHHHGTDLEEGTEIIAALIKRYNEVGLLDDAQFARARAKSLNRR
                     GSSVRAIRAKLSEKGIAADLISETLKKLTDEDQNPEFTAAVTFARKRRIGPFRADDNR
                     AELREKDLAALARAGFNYDMAQKVIEAETTEELEDEIEQNIKGQD"
     gene            749..1564
                     /locus_tag="QF359_02095"
     CDS             749..1564
                     /locus_tag="QF359_02095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO85729.1"
                     /translation="MPDHSAEPKSLTIRPVLSGANWRGLWTLYSKEVHRYVKIFGQTL
                     LAPIITTLLFLTVFAVAFGGGRTVNGLPYIEFLAPGLLMMTILQNAFANTSTSLIQQK
                     LNENIVDTLMPPLNAIELTIGFVFSGATRGLMVAIGVGASLALIVPVHIHNIAAIVFF
                     AVGAALMMGSMGMMTGIWAEKFDHVSTITNFIILPLSFLSGTFFPITRFPNILQSVSH
                     FNPFFYLIDGLRFGFTGQSSGSLEIGIAFVVMVNASLLATCYAMFKTGYKIKA"
     gene            1569..2366
                     /locus_tag="QF359_02100"
     CDS             1569..2366
                     /locus_tag="QF359_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO85730.1"
                     /translation="MQIGDTRPRRGLWNQVGTWSLYKREVHRFFKIAGQTFVAPVVTA
                     LLFLAIFSLAFSGEGRSIGDVPFVRFLVPGLTLMAMITASFANASFSLMFEKVVETIV
                     DTLMPPLTPVEITAGYVLSSTTRGFLVGLMVIFGMAIFTDIEIHSLFFILFHAIAASM
                     LMALFGLIVAIWAEKIDHVASVNNFVILPFTFLSGTFYSTENLPVFFQKIAHFNPFFY
                     LIDGFRYGFLGLHDGSLTTGLVLLTSMIVICWVACIKLFSSGYKLKS"
     gene            2434..2643
                     /locus_tag="QF359_02105"
     CDS             2434..2643
                     /locus_tag="QF359_02105"
                     /inference="COORDINATES: protein motif:HMM:NF023331.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85731.1"
                     /translation="MAVNVKLADDLVADAKKYAAIHHRSTPKQIEYWSHMGKVAEENP
                     DLPFSVIKDILIARQEDADEEYKFG"
     gene            2643..2915
                     /locus_tag="QF359_02110"
     CDS             2643..2915
                     /locus_tag="QF359_02110"
                     /inference="COORDINATES: protein motif:HMM:NF027117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HJO85732.1"
                     /translation="MPRILQTPTFKRTAKKLHKSEKQVLDNAVEEIAVDPACGEVKVG
                     DLAGVIVFKFRMNSDLKLLAYEYFENENEIKLLALGSHENFYRDLK"
     gene            3047..4222
                     /locus_tag="QF359_02115"
     CDS             3047..4222
                     /locus_tag="QF359_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HJO85733.1"
                     /translation="MTSAIMPTYAPADIAFEHGEGVYLYSTDGKKYMDFGSGIAVSSL
                     GHSHPHLVSAIQEQAGKVMHYSNLYRIPGQETLAQRLVDNSFASSVFTCNSGAEAVEC
                     GLKIVRRYHDVNGDPDKYRVITCTDSFHGRTLATLSAAKNKKHMDGFTPMLDGFDQVP
                     FGNLNELRAAITEETAAILVEPIQGEGGINYASPDYFQRLRETADEFGLLLFIDEVQT
                     GIGRTGKLFAHEWSEIQPDVVAAAKSLGGGFPVGVCLANEKATAAMAPGSHGSTFGGN
                     PMASAAANAVLDIVLADGFLENVQKTGAYLRTQLEELSSQHTFLGEVRGQGLLTGITC
                     DDSVTNLDLVKAAEDKGLLTVPAGANVVRVLPPLIVSEAEIDEGLAILDQACGEMGG"
     gene            4224..>4612
                     /locus_tag="QF359_02120"
     CDS             4224..>4612
                     /locus_tag="QF359_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HJO85734.1"
                     /translation="MSTLKTTPKHFLNIDQFDTATLRAILSHASELKKAGRGHAKPLT
                     GHTLVLIFEKSSTRTRVSFEVGMQQLGGNVVVLGSQDSQLGRGESVADTARVLSRFAD
                     AIMIRTDSHQKLEWLAEYASVPVINGLT"
BASE COUNT         1120 a         1122 c         1092 g         1278 t
ORIGIN      
        1 caaacagaat tgtatgagat taatcagtcc tgacctttga tattctgctc aatttcgtct
       61 tcaagttctt ccgtagtttc agcttcaata actttttgtg ccatgtcgta gttaaaccca
      121 gcgcgggcca aggccgccag atctttttcc ctcaattccg cccggttatc gtcggcccta
      181 aacgggccaa tacggcgttt tctggcaaaa gttacagcag cggtgaattc cgggttttga
      241 tcttcgtctg tcaacttttt caaagtttca gaaatcaaat cggcagcgat tcctttttca
      301 gaaagcttgg cccggatggc gcgcaccgag gagccccggc gattaagact tttcgcccgc
      361 gccctggcaa attgagcatc atccagtaat ccgacttcat tgtagcgttt gattagtgcg
      421 gcgattatct ccgtcccttc ttccaagtcg gtgccatgat gatgggccga tcgctgtacc
      481 cggcgcatta aaacgcgacg cagattttcg cttgaagatg aaaagcgctg gagataataa
      541 agtgccgcat tttccagtga tttaggtgtc gctttgcgag gtattttttt tcttttgctt
      601 agttctttta aattcttcag ccgcataaag tcttcaacca caattttttt aaatttatta
      661 caaaaagctt ggatttctgt accatagggt tatatcaact gcccagtaaa ttcacctggc
      721 aataaacgag tgataaacaa gcgagacaat gccggatcat tccgccgaac caaaatcatt
      781 aacaattagg cccgttttaa gcggcgccaa ttggcgtggg ctgtggacgc tctattccaa
      841 agaagttcac cgctacgtta aaatattcgg ccagactttg ctggcgccaa tcattaccac
      901 cttgttgttt ctaacagtct tcgctgttgc cttcggtggc ggacgaaccg tcaacggcct
      961 accatatatc gaatttttag cgccgggctt gctcatgatg acgatcttac aaaatgcctt
     1021 tgctaatacg tcaacttcgc taatccaaca aaaactcaac gagaatatcg tcgacacctt
     1081 gatgccgcca ttaaacgcaa tagaactgac catcggcttt gtctttagcg gcgcgacgcg
     1141 cggcttgatg gtcgctattg gcgtcggtgc cagcttggca ctaatcgttc ccgtgcacat
     1201 ccacaacatt gccgcgatag tattttttgc agtaggcgcg gcgctaatga tgggctcaat
     1261 gggtatgatg accggcatct gggcggaaaa atttgaccac gtgtcgacga tcactaattt
     1321 tatcattcta cccctatcat ttttgagcgg cacttttttt ccgataacgc gctttccgaa
     1381 tattttacaa agtgtcagcc acttcaatcc gttcttttac ctgattgatg gcttacgttt
     1441 tggcttcacc ggccagtcat ccggttcact tgaaattggt attgccttcg tcgttatggt
     1501 caatgcgagc ctattagcaa cctgttacgc tatgttcaaa accggctata aaattaaggc
     1561 ttgaagagat gcaaatagga gatacccgtc cccgccgtgg cctatggaat caagtcggca
     1621 cttggtcgct ttataaaaga gaggtgcacc gctttttcaa aatagccggt cagacttttg
     1681 tcgcccctgt ggttaccgca ttattgtttc tggcaatctt cagtctggcg ttttccggtg
     1741 aagggcgctc gatcggcgac gtgccgttcg tgcggtttct ggtgccggga ttaacattga
     1801 tggcaatgat aacagcgagc tttgccaatg cgtcgttttc actgatgttt gagaaagtgg
     1861 ttgaaaccat tgtcgatact ttaatgccac cactgactcc ggtggaaata acggcgggct
     1921 acgtattatc gagcaccacc cgcggttttt tagttggcct gatggtaatc tttggtatgg
     1981 ctatcttcac agatatcgag atccactccc tattttttat cttatttcac gccattgccg
     2041 cttcaatgtt gatggccttg ttcggactga ttgtggcgat ttgggcggag aaaattgacc
     2101 atgtcgcttc ggtcaataat tttgtcattc tgccgtttac cttcctgtcc ggcacttttt
     2161 attcgaccga aaacctgcct gtattctttc aaaaaatagc ccatttcaat ccgttctttt
     2221 atttgatcga tggctttcgc tacggctttt taggtttgca tgacggctct ctgaccaccg
     2281 gcctggtttt attgacgtca atgatcgtga tttgttgggt agcctgcata aagctcttct
     2341 ccagcggcta taagctaaaa tcttaaggta actaaaaagt tcctttttag ttacttttgg
     2401 tgtataatgc tcctaaaatc tgaagattat actatggctg taaatgttaa actcgcggat
     2461 gatctagtgg cggatgcaaa aaaatatgct gccattcacc atcgctcgac acccaaacaa
     2521 attgaatatt ggtcccatat gggtaaggtc gctgaagaga acccggacct gcctttctcg
     2581 gtgatcaaag atattctgat tgcgcgccag gaagatgctg atgaagagta caaattcggc
     2641 taatgccaag aattcttcaa acgccgacct ttaaacgcac tgctaaaaaa ctacacaaat
     2701 cagaaaaaca agttcttgat aacgccgtgg aggagattgc tgtcgacccc gcctgcggtg
     2761 aagttaaagt tggcgatttg gctggagtta tagtctttaa gttcagaatg aacagcgatc
     2821 taaaactatt agcctatgaa tattttgaga acgagaacga aatcaaactt cttgcactag
     2881 ggtcacacga aaatttctac cgtgatttga aatgatagct ctcagacaca aatcactccc
     2941 aatccccatt tttgttgaca aatagggctg agatttagat actgcgccgc tttcccggac
     3001 ggtatagcaa aaatgtgccg tccttaattt ttttaaggag agcgacgtga cttccgccat
     3061 tatgcctacc tatgcaccag ctgacatagc ctttgagcac ggtgaagggg tttatctata
     3121 ttcgacagac ggcaagaaat atatggactt cggttcaggt atcgctgtta gctcgcttgg
     3181 ccattcacac ccgcatttgg tcagcgctat tcaggaacaa gccggtaagg ttatgcatta
     3241 ttccaacctg taccgcatcc cgggccagga aaccctcgct caacgcctcg tcgataatag
     3301 ttttgccagc tcggtattta cctgtaattc cggggcggaa gccgttgagt gcggtctcaa
     3361 gattgtccgg cgctaccatg acgtaaacgg cgatccggat aaataccggg tgatcacctg
     3421 caccgacagc tttcatggcc gtaccttggc gaccttgtcg gcagccaaga acaaaaagca
     3481 tatggacggc tttacgccga tgctggatgg atttgatcag gtgccgttcg gcaatttgaa
     3541 tgagctcaga gcggccatca ccgaagaaac cgccgccata ttggttgagc cgattcaagg
     3601 tgaaggcggc attaattatg cctctccgga ttatttccaa cggcttagag aaaccgccga
     3661 tgagtttgga cttttgcttt tcattgatga agtgcaaacc ggtatcggca gaaccggcaa
     3721 gctgtttgct cacgaatggt cggaaatcca gccagacgtt gtcgctgcgg ctaaaagcct
     3781 cggtggtggc ttcccggtcg gcgtctgtct tgccaatgaa aaagccaccg cagcgatggc
     3841 gcccggttct catggctcga ctttcggcgg caatccgatg gcctctgcgg cggccaatgc
     3901 ggtattggat attgtcttgg ctgatggctt ccttgagaat gtgcaaaaaa cgggcgcata
     3961 tctccgtacc cagctggaag aactttctag tcagcacact tttttgggcg aagtgcgcgg
     4021 ccagggcttg ctcaccggca ttacttgtga tgacagtgtg accaatctcg atctcgttaa
     4081 agccgccgaa gacaaaggcc tgctgacagt gccggcagga gccaatgttg tccgggtttt
     4141 gccgccatta atcgtcagcg aagctgaaat cgacgaaggc ttagcgatcc tagatcaagc
     4201 ctgcggcgaa atgggcggtt gatatgtcaa ccctcaaaac aacgccgaag cattttctca
     4261 atatcgacca gttcgatacg gcaactttgc gagccattct tagtcatgcc agcgaactta
     4321 aaaaagctgg gcgagggcat gctaaaccat tgacgggtca tacactcgtt ctgatctttg
     4381 aaaaatcctc aacccggacg cgggtatcct ttgaagttgg catgcagcaa ctaggcggca
     4441 atgtcgtcgt tctcggtagc caggattcgc agctcgggcg cggcgaaagc gttgccgata
     4501 ccgcgcgcgt attgtcacgc tttgccgatg cgatcatgat ccggacagat tctcatcaaa
     4561 aactcgaatg gctggcggaa tacgcttccg tgccggtgat caatgggctg ac
//
LOCUS       DASCNL010000163         3492 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000370744, whole genome shotgun sequence.
ACCESSION   DASCNL010000163 DASCNL010000000
VERSION     DASCNL010000163.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000370744"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(143..292)
                     /locus_tag="QF359_02125"
     CDS             complement(143..292)
                     /locus_tag="QF359_02125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85735.1"
                     /translation="MFVEQKISVARLGGIEDKIPAALLVRAELQNELLAQDLLLELAL
                     RLRRP"
     gene            425..1723
                     /locus_tag="QF359_02130"
     CDS             425..1723
                     /locus_tag="QF359_02130"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85736.1"
                     /translation="MTDLLPLPVSRTEIKKNQSERKKIAFERAKTAKWYQGKLDDIDA
                     GKLDDPEVWGQIPIVTKDILREFDHADFLANFNVAPPEDIAEYWRSGGATGKPVFYPR
                     TFEDVNYALESWARSYLALGIGPGDLCHISFPIGIHPAGQIWARSAHQMGVGMNWVGA
                     GNAVPSDAQIDLIMALKPTVLISMPGFALNLVNIADTRGIDLAKSSVRTVVCSAETLS
                     DAKREKLGRRWGAEVFDVFGMSEAGLMGSECDAHDGIHIWDDMYYCEVVDEETGKILP
                     YGEVGTFCVTPLYTNNATPFLRWNSGDIVQIIEQGESSTKEAELFTMIKHAARTSGFF
                     KIRGVNINHTEFEDFMFRNEDINDFQAVLSTGEDDLEHMRVLIEVKRGSDETAVHVHV
                     TSEIKRIFEVTVSVEVQELGTLAKAFETSIKAPRFVDERG"
     gene            1750..1917
                     /locus_tag="QF359_02135"
     CDS             1750..1917
                     /locus_tag="QF359_02135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85737.1"
                     /translation="MRNEVTIHSGVSDNVYEMATDEGPVHGGESTAPPPLAYFATAMG
                     ACLMTQLRVFS"
     gene            1978..2175
                     /locus_tag="QF359_02140"
     CDS             1978..2175
                     /locus_tag="QF359_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85738.1"
                     /translation="MVGRNPYETEPIGFNLDIELDTDAPLDDQKKLIDAAKKGCFIEQ
                     TLGQSNNIGHRLKIGDDWIDV"
     gene            complement(2252..3271)
                     /gene="ilvC"
                     /locus_tag="QF359_02145"
     CDS             complement(2252..3271)
                     /gene="ilvC"
                     /locus_tag="QF359_02145"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HJO85739.1"
                     /translation="MRVFYDRDADVNLIKTKKVAIVGYGSQGHAHTLNLRDSGVTEVA
                     VALRQGSGSIAKAEAENIKVMEPAEAAAWADVLMILAPDEIQADLYAEHIHDNLKPDS
                     AIAFAHGLAIHFGLITPPEGVDVFMIAPKGPGHTVRGEYARGAGVPCLVAVNQDASGA
                     ALDLALSYGSAIGGGRSGIIETTFREECETDLFGEQTVLCGGLTSLITASWETLVEAG
                     YAPEMAYFECLHEVKLIVDLMYEGGIANMRYSISNTAEFGDYISGPRIIDAGVKERMK
                     EVLEDIQSGKFVREWMMENKVGAPRFKAMRRRAAEHDIEKVGQNLRDMMPWITDNALV
                     DKSKN"
     gene            complement(3319..>3492)
                     /locus_tag="QF359_02150"
     CDS             complement(3319..>3492)
                     /locus_tag="QF359_02150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HJO85740.1"
                     /translation="ADIFRAHVVDSTNESFVFEIVGSTDKLDAFIDLMKPLGLVDVSR
                     TGVVAIARGAEPI"
BASE COUNT          880 a          887 c          885 g          840 t
ORIGIN      
        1 ccatcgcgca acgtagtatc aaaaattatt atgtcgtttt ttgatttctt ggaagtcatt
       61 tgactggacc tttctaaata gcgtttacga ttctaagacg atttcttccc ctgaacacat
      121 gccgcgtatt tagcgtgcac gatcaggggc gcctaagtcg tagggccagt tccagcagga
      181 gatcttgagc cagtaattcg ttttggagtt cggcacgcac cagcaacgct gccgggattt
      241 tatcctcaat accgcctaaa cgcgcgacac tgattttctg ttcaacaaac attaaatcat
      301 tccaataaat tacctaacag agggctaata aggtgttttt gcgctccaag tcaataggtt
      361 tatagtggtt tacggattaa cccaggctaa actaagctgg ctgatatttt gggaggggat
      421 tttaatgacg gatctattgc cgctaccggt ttcacgcacc gagattaaaa aaaaccaaag
      481 cgagcgcaaa aagatcgcct ttgaacgcgc caagacggcg aagtggtatc aaggtaaact
      541 tgatgacatc gatgccggca agctcgatga tccggaagtc tgggggcaga tcccgattgt
      601 cacaaaagat atactacgtg agttcgatca cgctgatttc ttggcgaatt tcaacgtcgc
      661 accgccggaa gatattgctg aatattggcg ttccggcgga gccacgggaa aaccggtgtt
      721 ttatccccgc acattcgaag acgtcaatta tgcgctcgaa agctgggcgc gctcctatct
      781 ggcgctcggt atcggacccg gtgatctctg ccatatatct tttcccatcg gcattcatcc
      841 agcgggccag atttgggcac gctcggccca tcaaatgggg gtcggtatga attgggttgg
      901 cgccggcaat gcggtgcctt cggatgcgca aattgatctt attatggcgc tgaaaccgac
      961 ggtgctcatt tcgatgccgg ggtttgcgct aaatctggtc aatattgccg atacccgggg
     1021 tattgatctt gccaaaagtt cggtgcgcac cgtcgtctgt tcggcggaaa ctctatcaga
     1081 tgccaagcgc gagaaactcg gccgccgctg gggtgctgag gtgtttgatg ttttcggtat
     1141 gagtgaggcc ggcctgatgg gcagtgaatg cgacgcccat gacgggattc atatttggga
     1201 cgatatgtat tactgcgaag ttgtcgacga agagaccggc aaaattctgc cttatggtga
     1261 ggttggcacg ttctgcgtga cgccccttta taccaataat gcaacgccgt tcctgcgctg
     1321 gaactcgggc gatatcgtgc agattatcga gcaaggggaa agttccacca aagaggccga
     1381 gctcttcacc atgatcaaac atgcggccag gaccagtggc tttttcaaaa ttcggggtgt
     1441 taatatcaat cataccgagt ttgaagattt catgttccgc aatgaagata tcaacgactt
     1501 ccaggcggtg ctctcaaccg gtgaggatga tctcgaacat atgcgggtgt tgattgaagt
     1561 gaaacgcggc tcggatgaaa ccgccgtgca tgtacacgtc acctccgaga tcaagcggat
     1621 ctttgaagtc actgtcagtg tcgaagtgca ggaacttggc acgctggcca aggcgtttga
     1681 gaccagcatt aaagcccccc gctttgtcga tgagcggggt tagaattaag gaaacatgcc
     1741 aagcgtcaca tgcgcaacga agtgaccatt cattccggcg ttagcgacaa tgtttatgaa
     1801 atggcgaccg atgaaggtcc ggtgcatggt ggtgaaagca cggcgccacc accgctggcc
     1861 tattttgcaa cggcgatggg cgcctgcctg atgacccagc tccgtgtgtt ttcataacga
     1921 ctggatgtcc ctctcaacga tgtcagctta gccggccgat atcactggcg gggcacaatg
     1981 gtcggacgca atccgtatga gaccgagccg atcggcttca atctggatat cgagcttgat
     2041 actgacgcac cgttagacga tcagaagaaa ttaatagatg ccgccaagaa aggttgtttc
     2101 attgaacaaa ccctcggtca gtcaaataac atcggccacc gcctcaaaat cggcgacgat
     2161 tggatagatg tgtagggagc aatttcaatc tcgcataaaa aaacgctcgg catttctgcc
     2221 agagcgcttt taataaatat atccggtcaa attagttctt agacttatcg accaaggcat
     2281 tgtcggtgat ccacggcatc atgtcgcgga ggttctgacc gactttttca atatcatgct
     2341 cagcagcacg gcggcgcatg gctttaaagc gcggtgcgcc aactttgttt tccatcatcc
     2401 attcccgcac gaacttaccg gactgaatgt cttcgagcac ttctttcatg cgctctttga
     2461 cgcccgcatc gataatgcgc ggtccagaga tatagtcacc aaattcggcc gtattggaga
     2521 tcgaataccg catattggcg atgccacctt catacatcag atcaacgatc agcttcactt
     2581 catgcagaca ttcgaaatag gccatttccg gggcgtaacc ggcttcaacc aatgtctccc
     2641 agctggcggt gatgagcgag gtcaagccac cgcaaagcac ggtttgctca ccaaagagat
     2701 cggtttcaca ttcttcgcgg aacgtggttt cgatgatgcc gcttcgcccg ccaccaatgg
     2761 cggaaccata cgacaaggca agatcgagcg ccgcaccgct ggcatcctga ttaaccgcaa
     2821 ccagacacgg cacaccggca ccacgggcat attcaccgcg cacggtgtga cctggacctt
     2881 tgggggcaat cataaaaaca tcgacacctt ccggcggcgt gattagacca aagtgaatgg
     2941 ccagaccgtg ggcgaatgca atcgccgagt cgggtttcaa attgtcatga atatgctcgg
     3001 cataaagatc agcctgaatc tcatccggcg ccaaaatcat taagacatcg gcccaagctg
     3061 ccgcttctgc cggctccatc actttgatgt tttcggcttc ggctttagcg atagaaccgg
     3121 agccttggcg caatgcgacc gcaacttcgg taacgccgct atcgcgcaaa ttcagtgtat
     3181 gagcatggcc ctggctacca tacccaacga tggcaacttt cttagttttg atcagattga
     3241 catcagcgtc acgatcataa aaaacacgca tggtttatat ccccacaatt acatttaatt
     3301 ttagttagtc aaaatagttc aaataggttc ggcaccgcgc gcgatggcga ccacacccgt
     3361 acgtgacaca tccaccagac cgagcggctt cataagatca ataaaagcgt ccagcttatc
     3421 ggtgctgccg acaatttcga aaacgaatga ttcatttgta ctgtcgacaa catgggctcg
     3481 gaatatatcg gc
//
LOCUS       DASCNL010000164         1735 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000374511, whole genome shotgun sequence.
ACCESSION   DASCNL010000164 DASCNL010000000
VERSION     DASCNL010000164.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000374511"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="QF359_02155"
     CDS             <1..302
                     /locus_tag="QF359_02155"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJO85741.1"
                     /translation="QVIFKDLAKTADVVVENLHPDAMSKIRLTYDQLKDSNPELIWAL
                     ISGFGQLEDYRGPYADRPAFDIVAEAMSGIMNLVGFADKPRPRRFLAWRTSIPAW"
     gene            617..1303
                     /locus_tag="QF359_02160"
     CDS             617..1303
                     /locus_tag="QF359_02160"
                     /inference="COORDINATES: protein motif:HMM:NF019349.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HJO85742.1"
                     /translation="MFDYAVKNIQSENGSGLIRDGVYEKIRADILTCVLAPGSRVFEN
                     DLAQRYNVSKSPVRDALLRLQEQGLIDVLPRKGYLIRPISISDAHDLYEMRLLLEKSC
                     TRRACDEASDEDLASLDKFRAAENGDLAHWVTYNRDFHRRIAELSGNARMAKMTQEVI
                     DQFDRLTFVGVSAAPTEAAAEKFVAEHCEIIDALQVRDRSTVTSLINKHITKSQKQLF
                     AVLENPPIVE"
     gene            1348..>1735
                     /locus_tag="QF359_02165"
     CDS             1348..>1735
                     /locus_tag="QF359_02165"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO85743.1"
                     /translation="MKPFDFVQPTTTDAALAALVEHSPNVRILCGGTDYVVELKHVAQ
                     SPGVVVDVSRLEDLKGIELTDAGLRIGAGVTHSEIMADLLIAEHAPAMIDAAHTVGAV
                     QTRNLGTLGGNLVTCVPSMDSGPTLLA"
BASE COUNT          451 a          389 c          449 g          446 t
ORIGIN      
        1 gtcaggtaat ctttaaagac ctcgccaaga ccgctgatgt ggtggttgaa aacttgcacc
       61 cggacgcgat gagtaaaatc aggcttactt acgaccagct aaaagacagt aatccagaac
      121 tgatctgggc gctgatctcg ggcttcggtc agcttgaaga ttaccggggc ccttacgccg
      181 accgcccggc atttgatatt gtcgccgaag cgatgagcgg tatcatgaat ttggtcggtt
      241 ttgctgataa gccccgtcct agacgatttt tggcatggcg gacatctatt cccgcttggt
      301 gaccgccttt ggtattatgc aggcgttgtt tatgtgggaa cgcactagcc acggtcaatt
      361 ggtcgatggg atgtgctaag aagatgtccc cggagtttta aaatattaac aaaagtacct
      421 atcactattt agaaaactta ataaaatcaa cagagtaaat tattgagtgc tggtcaaatc
      481 ttcctttgtg atatttcaga aataaaaaaa ataaattatt taatattcct aaattaaaga
      541 aaaacacaag aatttattgc tataatagta ataagattat aaataatata attattagat
      601 atttcacagg aatgatatgt ttgattatgc ggtaaaaaat attcagtcgg aaaacggctc
      661 gggcctgatc cgggatgggg tctatgaaaa gatccgcgcc gatattctca cctgcgtctt
      721 ggccccgggt tccagggtat tcgagaacga tctcgctcag cgttataatg tcagtaaatc
      781 accggtgcgc gacgctttat tgcgtttgca ggagcagggt ttgatcgacg tgctgccgcg
      841 aaagggctat ctcatccggc caatctccat cagcgacgct catgatcttt acgagatgcg
      901 tttactgttg gaaaaatcat gtactcgccg cgcttgcgat gaagcgagcg atgaagattt
      961 agcctccctc gacaaattcc gtgcagctga gaatggcgat ctcgcccatt gggtgaccta
     1021 taaccgggat ttccatcgcc gcattgctga gctgtcaggg aatgccagga tggcaaaaat
     1081 gacccaggaa gtgatcgatc agtttgaccg gctgactttt gttggggtgt cggcagctcc
     1141 caccgaggcg gcagcggaaa aatttgtcgc tgagcattgt gagattattg atgccctgca
     1201 ggtgcgggat cgctcgacgg tgaccagttt gattaataag catatcacca aatcacaaaa
     1261 acaattattc gcggtgttgg aaaatccccc aatcgtcgaa taacgaaata aaaaagtaac
     1321 caggtaagtt tatgaggaag gtgtattttg aaaccctttg attttgttca acccaccacc
     1381 accgatgcgg cgctcgcggc cttggtggag cacagcccga atgtgcgcat tctttgtggc
     1441 ggcacggatt atgttgtcga attgaaacac gttgcgcaaa gtcccggcgt cgtcgttgat
     1501 gtttcccggc tcgaggattt gaaaggtatc gagctgaccg atgcggggct caggatcggt
     1561 gcaggcgtaa ctcactcgga gattatggcg gatctactga ttgccgagca cgcaccggcg
     1621 atgattgatg ccgcgcatac ggttggcgcc gtgcaaaccc gcaacctcgg tacacttggt
     1681 ggcaacctcg tcacctgcgt gccgtccatg gatagcgggc cgacgctgtt ggcat
//
LOCUS       DASCNL010000165         3632 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000376237, whole genome shotgun sequence.
ACCESSION   DASCNL010000165 DASCNL010000000
VERSION     DASCNL010000165.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3632)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3632)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3632
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000376237"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2822
                     /locus_tag="QF359_02170"
     CDS             <1..2822
                     /locus_tag="QF359_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJO85744.1"
                     /translation="IAIPELPDDTDEPTVHEVNFSLFPVVVVILSGDVPERKLIGLAN
                     ELQDAIEGNPSVLKAEIAGDRDEMVEVIIDPVKLESYGIQAGAITSIMRTNNLLVAAG
                     VQDTGRGRFSVKVPGIFENVTDIMNMPVVVDGDSAVRVRDVAEVRKTFKDPKGFARVA
                     GKNAVALEVSKRTGENIIQTIADVRAIVEVERRNWPESLQKAVQISFSQDKSDNIKSM
                     LKDLQNNVASAIILVMIVVVAVLGLRTASLVGVAIPGSFLIGILALSALGLTMNMVVL
                     FALILAVGMLVDGAIVVTEYADRKMIEGEPRDRAYGMAAKRMAWPIITSTATTLAAFL
                     PLLFWPGVVGEFMKFLPLTLILTLSASLLMALVFVPTLGSIFGKPGSIDDKILKATLA
                     GESGDLDNVEGFVGRYLKVLKPVLRHPAKVVTAAFAVLILVQVVYGTFGKGLEFFPDV
                     ESENAKLQVRARGNLSIHEKDSIMHEVESRILDMTEFETIYTRTGREENSREAEDIIG
                     SISLEFVDWQKRRKAAVILKEIEQRTQDIPGIYIDAREQEEGPPVGKPINLQISSRYP
                     ELLQSAVGLIRDKLEKTLGMINIEDSRPLPGITWEVSVDRAQAAKFGADIKTIGQAIR
                     LVTGGIKVDEYRPNDTDDEVEIRVRYPVEFRTIKQLDYIRVRTNQGLVPLSNFVKRTA
                     QPRIGKVNRIDGKRSLSVKADLEPGLLADTKVKELSKWLATQKIDPRVTIAFKGEDEE
                     QRKAKAFLSKAFGVALFIMAIILVTQFNSFYSALLILSAVIMSTIGVFIGLLVTGQPF
                     GIVMSGIGVIALAGIVVNNNIVLIDTFDQLRKTVSDPMEAILRTGAQRMRPVLLTTTT
                     TILGLMPMVFGVNIDFVTREIAMGAPSSQWWTQLSTAIVFGLGFATLLTLFVTPASLM
                     IRANIHDWRVRRQQNKLAVEISSAE"
     gene            complement(2826..>3632)
                     /gene="pssA"
                     /locus_tag="QF359_02175"
     CDS             complement(2826..>3632)
                     /gene="pssA"
                     /locus_tag="QF359_02175"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HJO85745.1"
                     /translation="FRPRRERLRGLSFNKMIPNILTMLALCAGLTSMRFGLDGKWEPA
                     IISLVISGVLDSLDGRIARALRGTSKFGAELDSLSDFICFGVAPAFLLYLWTMKDAGP
                     YGWVLVLLFSVCCALRLARFNIDIDGSDLPAWTKNYFTGVPAPAGAGLVLLPMIISFQ
                     VDVQFLRQPFVVTLFIIVVSGLLVSQLPTYSFKNLRIQHRFVLLTMLIVGLVAAMTVS
                     APWLTLTIILVAYIATFPFGAKSYRKQEAKTPKPPKNNAKPDNELEIADE"
BASE COUNT          931 a          812 c          961 g          928 t
ORIGIN      
        1 acatcgcgat accagaattg ccggacgata cggatgagcc aactgtccac gaagtaaatt
       61 tcagcctgtt tccggttgtt gtcgttattt tgtctggtga tgtgcccgag cgaaaactaa
      121 ttggtctggc taatgaattg caggacgcaa ttgaaggcaa tccaagcgtc ttaaaagcag
      181 aaattgccgg tgatcgcgat gagatggtcg aagttattat cgatccggtt aaacttgaaa
      241 gctatggtat tcaggcgggt gcaataactt ctatcatgcg caccaacaat ctgctggttg
      301 ctgccggtgt ccaggatacc ggcagagggc gtttctcggt taaagtgcca ggtatttttg
      361 aaaacgttac cgatattatg aatatgccgg tggtcgttga tggtgattca gcggtgcgcg
      421 tcagagatgt tgccgaagtt cgtaaaacct ttaaggaccc gaaaggattt gccagggtcg
      481 ctggaaaaaa tgcggtggcg cttgaggttt ctaagcgaac tggcgagaat attattcaga
      541 cgattgccga tgttagagca attgttgagg ttgaacgccg gaattggccg gaatcgctgc
      601 aaaaagcggt tcaaattagt ttttctcagg ataaatccga caacatcaaa agtatgctga
      661 aagatctgca gaataatgtc gccagtgcaa tcattctagt gatgattgtc gtcgtcgctg
      721 tgctgggctt gcgcactgcc agtttggtgg gcgtcgctat cccgggctct ttcttaattg
      781 gtatattggc gctttctgcc cttggcctga cgatgaatat ggttgtgctt tttgcgctaa
      841 ttttggcagt cggtatgctg gttgatgggg ccattgtagt gaccgaatac gctgaccgga
      901 aaatgattga gggtgaacca cgggatcgcg cctatggcat ggcagctaaa cgcatggcct
      961 ggccgattat tacctcgaca gcaacgacct tggcagcatt tttgccgtta ttgttttggc
     1021 ccggcgtcgt tggtgaattc atgaaattcc tgccgctgac tcttattttg acactatcag
     1081 catcactttt aatggcgttg gtttttgttc cgacgttggg ctcgatattc ggcaagcccg
     1141 gctcaatcga tgacaaaatc ttgaaagcga cactggcggg cgaaagtggt gatctcgaca
     1201 atgtcgaagg atttgtcggg cggtatttaa aagtcttgaa gccggtttta cgtcatccag
     1261 ctaaggtggt aacggcagca ttcgccgtac tgatattggt gcaggttgtt tatggtacat
     1321 ttggcaaggg tcttgagttt ttccccgatg ttgaatcgga aaatgccaaa ttgcaggtgc
     1381 gcgcacgcgg taatctttca atccatgaga aagatagcat tatgcatgag gtcgaatcgc
     1441 gcattctcga tatgacggag tttgaaacga tctatacccg gacgggccga gaggaaaaca
     1501 gccgggaagc agaagatatt attggttcta tctcacttga atttgttgat tggcaaaaac
     1561 gccgtaaggc agcggttatt ttgaaggaga tcgaacagcg cacgcaggac attcccggca
     1621 tatacattga tgcgcgtgaa caggaagaag ggccgccggt cggcaaacca attaacctgc
     1681 aaatttcgtc gcgctatcct gagctgctgc aaagtgcggt tggtctcatt cgcgataaac
     1741 tcgaaaaaac actgggcatg atcaatattg aagattcccg gccgcttcca gggattacct
     1801 gggaagtttc ggttgatcgc gcgcaggcag ctaaatttgg cgctgatatt aaaaccatcg
     1861 gacaggcgat ccgcttggta accggtggta ttaaagttga tgaataccgg cccaatgata
     1921 ccgatgatga agtggagatt agagtccgct atccggtaga attccgtacc attaaacagc
     1981 tcgattacat tcgggtcaga accaaccagg gtttggtacc gctcagcaat tttgttaaac
     2041 gcactgccca acccaggatt ggcaaagtca accggattga tggcaaacgg tcgttatcgg
     2101 tcaaagccga tcttgaacct ggcctcttgg cggacaccaa agtgaaagag ttgtcaaaat
     2161 ggctggcgac gcaaaaaatt gatccacgtg ttaccatcgc attcaaaggt gaagatgaag
     2221 agcaacgcaa ggccaaggca tttttatcga aggctttcgg cgtcgccctg tttattatgg
     2281 cgattatact tgtcactcaa tttaacagtt tttattcggc tttgttgatt ttatcagcgg
     2341 tgattatgtc gactatcggt gtctttattg gcttacttgt taccggtcag ccctttggca
     2401 tagtcatgag tggtatcggc gtcattgcgc tcgctgggat cgttgtgaac aacaatattg
     2461 tcctgattga taccttcgac cagctgcgca aaacggtcag tgatccaatg gaggctattt
     2521 taagaaccgg cgcacagcgt atgcggccgg tcttgttgac gacaacgacg acgatcttgg
     2581 gcctaatgcc gatggtattt ggcgtcaata ttgattttgt tacccgcgaa attgcgatgg
     2641 gggcgccgtc atctcagtgg tggactcagc tctcgaccgc gatcgtgttc gggcttggct
     2701 ttgcgacctt attaacgctg ttcgtaacac ccgcttcact gatgatccgg gccaatatcc
     2761 atgactggcg ggtgcgacgt cagcaaaata aactcgccgt ggaaataagc tctgctgaat
     2821 agttattatt cgtctgcgat ttctagctcg ttatctggct tagcgttatt cttaggtggt
     2881 ttaggagttt tggcttcctg ctttcggtac gactttgcgc caaacgggaa agtcgcaata
     2941 taggcaacta aaataatcgt caaagtcagc cacggtgcgc tgaccgtcat tgctgccacc
     3001 agtccaacta tcaacatggt gaggagtaca aatcgatgtt gaatccgcaa gttcttgaaa
     3061 gagtaggtcg gtagttggct caccagcaaa ccggatacga caataataaa caaggtgaca
     3121 acaaagggct ggcgtaagaa ctgaacatca acttgaaaag agataatcat cggtagcaat
     3181 actaaacccg ccccggcagg tgccggcaca ccggtgaagt aattcttcgt ccaggccggc
     3241 agatcggagc catcgatatc gatattgaaa cgggctagcc gtaaggcgca acagacgctg
     3301 aacaatagca ccagtaccca gccgtaaggt ccggcatctt tcatggtcca aagataaagc
     3361 aaaaatgcag gggcaacgcc gaagcagata aaatccgaca ggctgtcgag ctcggcacca
     3421 aatttgctgg tgccgcgaag cgcacgcgca atacggccat ccaaagaatc cagtaccccc
     3481 gatataacga gagaaatgat cgccggctcc cacttgccat cgaggccaaa acgcattgac
     3541 gtcaaaccag cgcatagcgc caacatcgtc aaaatgttgg ggatcatttt gttgaaagac
     3601 agtcctctta accgttcgcg gcgcggacgg aa
//
LOCUS       DASCNL010000166         4709 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000376564, whole genome shotgun sequence.
ACCESSION   DASCNL010000166 DASCNL010000000
VERSION     DASCNL010000166.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4709)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4709)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4709
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000376564"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(58..258)
                     /locus_tag="QF359_02180"
     CDS             complement(58..258)
                     /locus_tag="QF359_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85746.1"
                     /translation="MTLPSDLYNNDAYLRWWEEKFTGYPADNNELIVEVEEPNAPNEQ
                     EIEALYKLYRKTLCNLVERPAH"
     gene            564..1829
                     /gene="dsrA"
                     /locus_tag="QF359_02185"
     CDS             564..1829
                     /gene="dsrA"
                     /locus_tag="QF359_02185"
                     /EC_number="1.8.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018551 - dissimilatory sulfite reductase
                     activity [Evidence IEA];
                     GO_process: GO:0019420 - dissimilatory sulfate reduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dissimilatory-type sulfite reductase subunit
                     alpha"
                     /protein_id="HJO85747.1"
                     /translation="MTKKKHATPLLDELQGGKWPSFVDGLKRLADDEDKQYSGMMNDL
                     LGQLEHSYETKLGYWKGGTVSVFGYGGGVVPRFSQVAEDYPESSEFHTLRIQPPAGLH
                     YNTDLLRKICDIWEEHGSGLIALHGQSGDIMFQGCSTEKVQPAFDDLNEIGLDMGGAG
                     PALRTSMSCVGHARCEQSCYDEIRAHRSIINAFLDEMHRPALPYKFKFKFSGCANDCV
                     NAIHRADFAVIGTWRDDMKVDQDEVKKYVDQAGRKYTIDNVIARCPTNALSLNDDDTL
                     EVDNPSCVRCMHCLNVMNKALSPGDDKGVTLLIGGKRSLKIGDQMGTVVVPFLKLESD
                     EDFEKLEEMSENVIDFFAENALEHERIGETIDRIGLTNFLDGIGVEIDPNMVNHPRTN
                     SYVDTSKWDQEAEKWFERQDEDSSQTAAE"
     gene            1841..2923
                     /gene="dsrB"
                     /locus_tag="QF359_02190"
     CDS             1841..2923
                     /gene="dsrB"
                     /locus_tag="QF359_02190"
                     /EC_number="1.8.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018551 - dissimilatory sulfite reductase
                     activity [Evidence IEA];
                     GO_process: GO:0019420 - dissimilatory sulfate reduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dissimilatory-type sulfite reductase subunit
                     beta"
                     /protein_id="HJO85748.1"
                     /translation="MADTNVEPRRAEETGVPDPFPYMHPVLKKNYGNWKWHDRLRPGV
                     LHHVSHDNEEVWTVRAGTQRQMDVHTIRKLCDIADMRAEGHVRFTTRSNIEFMVSKED
                     MVAPLIEALEAEGFPIGGTGNSVSMISHTQGWLHCDIPGTDASGVVKSLMDDLHQEFV
                     TEEMPNRVRITTSCCQINCGGQGDIAINVQYTKPPVIDHDAVANVCERPAVVARCPVA
                     AIRPALVNGNPSLEVDEQKCICCGACYAPCPPMQINSEESTKIAIWVGGKHSNARSKP
                     TFHKLAIAGLPNNPPHWPEVGEVVKKILYVYKDHGRDWERLGEWIERIGWPRFFELAD
                     IPFTRFHIDDFRGARESLNASAHIHF"
     gene            2950..3308
                     /gene="tusD"
                     /locus_tag="QF359_02195"
                     /pseudo
     CDS             2950..3308
                     /gene="tusD"
                     /locus_tag="QF359_02195"
                     /inference="COORDINATES: protein motif:HMM:NF014672.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
     gene            3320..3712
                     /gene="tusC"
                     /locus_tag="QF359_02200"
     CDS             3320..3712
                     /gene="tusC"
                     /locus_tag="QF359_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HJO85749.1"
                     /translation="MEDFEDDEFDGPIKKFMYVNRKAPYGTVYALEGLEVVLITAAFD
                     QDVCLVFVDDGVFQIKKDQETTGINMKNFSPIYRALEGYDVEKIYVEKESLESRGFSE
                     DDLVIPVEILSSAEISELMDAQDVIVTF"
     gene            3736..4044
                     /gene="tusB"
                     /locus_tag="QF359_02205"
     CDS             3736..4044
                     /gene="tusB"
                     /locus_tag="QF359_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HJO85750.1"
                     /translation="MALLHTVNKSPFERNVILDCLRLAKDGSAILLIEDGVYAALEGT
                     SASDEITRRNGSIKFFALGPDIEARGLSEKSLIEGLTLVDYSGFVDLVEEYNSVQSWL
                     "
     gene            4084..4416
                     /locus_tag="QF359_02210"
     CDS             4084..4416
                     /locus_tag="QF359_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HJO85751.1"
                     /translation="MDYTVNDQTINADEEGYITDISTWSIDLAGTIAETENIDMGDDH
                     WEVVNFLRDYYEEYQIAPAVRVLTKAVKKSLGPEKGNSKYLYELFPYGPAKQACKIAG
                     LPKPTGCV"
     gene            4457..>4709
                     /locus_tag="QF359_02215"
     CDS             4457..>4709
                     /locus_tag="QF359_02215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase"
                     /protein_id="HJO85752.1"
                     /translation="MTAAYAILFYSATLILVIGLIVKIKQYATTPAPLKIPTTPAPTT
                     KQGVVLRMAREIIFFQSLFRANKWIWLFGWMFHIALVLVL"
BASE COUNT         1263 a         1004 c         1176 g         1266 t
ORIGIN      
        1 ctaaacacat atttagtagc atcggtaaga attgatttca ggaattccaa agcatcttta
       61 atgcgcgggt cgttcaacca gattacataa ggttttgcgg tataatttat agagagcctc
      121 aatctcctgc tcgtttggcg cattcggttc ttccacctca acaatcagtt cattattatc
      181 ggctgggtag cctgtgaact tttcctccca ccaccgtaaa taggcgtcat tgttatagag
      241 atcactaggt agggtcatta tcttattatc gagtgattga tttttatttt ccacataagc
      301 caattggctt aatgagtcta cttttgaacg gcctgatatc tattttagta tatacgcaag
      361 tataaaatac taaatatttt tgtatattta aaatatttta cgtaattaat tgaaatcaaa
      421 taatattttt ctataatcca acgtatatcg tatttaagga aaacgttgat tatagtaaat
      481 atattatgct aataatcatt ttggacaaca aaagttaatg caggggcggg gtctcgaaag
      541 agcatccgaa aaggagaata agagtgacta agaagaaaca tgcaaccccg ttgctagatg
      601 aactgcaagg cggcaaatgg ccaagctttg ttgatggctt gaaaagatta gccgatgatg
      661 aagacaagca atattcaggc atgatgaatg atctactggg gcagctggag cattcttacg
      721 aaaccaaatt aggttattgg aaaggtggca cggtcagtgt gttcggctat ggcggtggtg
      781 ttgttccgcg gttttcacaa gttgccgagg actatcctga atcctccgaa tttcacacgc
      841 tgcgtattca accaccggcc ggtctgcatt acaatactga tcttttgcgc aagatatgtg
      901 acatctggga agaacatggt tccggtttga tcgccctgca tggccaaagc ggcgatatca
      961 tgtttcaagg ctgttcgact gagaaagtgc aaccggcttt tgatgattta aatgagattg
     1021 gcctggatat gggtggcgcg ggaccagctt tgcggacgtc gatgagttgc gtcggtcacg
     1081 ccaggtgcga gcaatcctgt tacgatgaga tacgggccca tcggtcgatc atcaatgctt
     1141 tccttgatga aatgcaccgt ccggccttgc cgtataaatt taagttcaag ttttccggct
     1201 gtgccaatga ttgtgtgaac gccatacacc gcgctgactt tgcggttatc ggcacctggc
     1261 gcgacgacat gaaagtcgat caggatgaag ttaaaaaata tgtcgatcag gcgggccgta
     1321 aatacaccat agacaacgta atagcccgct gtccaaccaa tgcacttagt ctcaatgatg
     1381 acgacacgtt ggaagttgat aatccaagct gtgtccgctg catgcattgt ctcaatgtta
     1441 tgaacaaagc tttgtcaccg ggagacgata aaggcgtcac ccttttgatc ggcggcaagc
     1501 ggtcattgaa aatcggtgat caaatgggca ccgtcgtggt gccgttcctc aagcttgaga
     1561 gtgatgaaga ttttgagaag ctcgaagaaa tgtcggagaa tgtcattgat ttctttgccg
     1621 agaacgcact tgaacacgag cgcatcggtg agacaattga ccggattggc ttgaccaatt
     1681 tccttgatgg tattggcgtc gagatcgatc ccaatatggt caatcatccg cggacaaatt
     1741 cctatgttga tacgtctaag tgggatcagg aagctgaaaa atggttcgaa cggcaagacg
     1801 aagattcttc ccaaacggca gcggagtagg gaacagaaaa atggcagata caaacgtaga
     1861 accgcgccgc gcagaagaaa ctggagttcc ggatcctttt ccttacatgc acccggtgct
     1921 taaaaagaac tatggcaact ggaaatggca tgaccggctg cgtcccggcg tgttgcacca
     1981 tgtttcccac gacaacgaag aggtgtggac cgtccgggcg ggaacacagc gccagatgga
     2041 tgtccatacg attcgcaaac tctgcgatat tgctgatatg agagccgagg gccatgtccg
     2101 ctttacgacc cgcagcaata ttgaattcat ggtcagtaaa gaggacatgg tggcaccttt
     2161 gatcgaagct ctcgaagccg aaggtttccc catcggtggc accggtaatt cggtctcaat
     2221 gatttcccat actcaaggct ggctgcattg tgacataccc ggtaccgatg cttctggagt
     2281 ggtcaaatcc ctcatggacg atctccacca agaatttgtc actgaagaaa tgcccaaccg
     2341 ggtccgcatt acaacatcct gctgtcagat caattgtggt ggtcaaggcg atatcgccat
     2401 taatgtgcaa tacaccaaac caccggtgat tgatcatgat gcggtcgcca atgtctgtga
     2461 acgcccggca gttgtcgccc ggtgtcccgt agcagccatt cgtccggctt tggtgaatgg
     2521 caatccctcg cttgaggttg atgaacagaa atgcatttgc tgtggcgctt gttacgcacc
     2581 gtgtccgccg atgcaaatca acagcgaaga atcgaccaag attgcgatct gggttggtgg
     2641 caagcattcc aatgcgcgct cgaaaccgac ttttcataaa ctagcgatcg ccggattacc
     2701 caacaatcca ccgcactggc ctgaggtagg tgaagtggtg aagaaaattc tctacgtcta
     2761 taaggaccat ggcagggatt gggaacggct cggtgagtgg attgaacgca ttggctggcc
     2821 gcgctttttt gaactcgcgg acattccgtt tacccgcttc catattgacg atttcagagg
     2881 tgcgcgggaa agcctgaacg catcggcaca tatccatttc tagaattgat ttgaggagac
     2941 attaagcaaa tgaaattcgg catattagtt aatgaagggc cgttcactca tcaggcctca
     3001 gatagcgcct atcagttcac taaagcggcg atcgaaaaag gtcagagatt gtccgggtgt
     3061 ttttttatca tgatggggtc aacaattcta acaagcttgc cgatccaccg agtgatgacc
     3121 gcaatctggt taaactttgg tcggatttgg ctgctgagca tggcgttgaa ttgattgtct
     3181 gtgtggccgc cgccatgcgc cgcggtatta atgatgattt gcttgcagct ggtttcaaga
     3241 tttcaggtct cggccaattg gtggaagccg gtattatcgg tgaccggctc gtgacatttg
     3301 gtgattaggg ggaacggtga tggaagattt tgaagacgac gagtttgatg gacccattaa
     3361 aaagttcatg tatgtaaatc gcaaagcccc ttacggcacg gtatatgccc ttgaaggttt
     3421 ggaggtcgtg ttgatcaccg ccgcctttga tcaggatgtc tgtctagtat tcgttgatga
     3481 tggcgttttt caaatcaaaa aagatcagga aaccaccggc atcaatatga aaaacttttc
     3541 accgatctac cgggctctcg aaggttatga tgttgaaaaa atttatgtcg aaaaagaatc
     3601 attggagagt cggggcttca gcgaagacga tctagttatc ccggttgaaa ttttaagttc
     3661 ggctgaaatt tctgaactta tggacgcaca agacgtcatt gttacgtttt aaggatacgt
     3721 tttaggagtt gaacattggc tttactgcac accgttaaca aatcaccgtt tgaaagaaat
     3781 gttattttgg attgcctgcg gttggcaaaa gacggcagcg ctatcctctt gattgaggac
     3841 ggtgtttatg ccgcactcga gggaacttcg gcgagtgatg aaatcacccg ccgcaacggc
     3901 agtatcaagt tttttgcctt gggcccggat attgaagccc gggggttaag tgaaaaatcg
     3961 ctcatcgagg ggttaacgct cgtcgattac tccggttttg ttgatctcgt ggaagagtac
     4021 aattccgttc agtcttggct ttaaagcgaa taattgaacg ttaattttta aggagaacat
     4081 aaaatggatt ataccgtaaa cgatcagaca attaatgctg atgaagaagg ttacatcact
     4141 gatatatcaa cctggtcaat agatttagcc ggtacaattg ccgaaactga aaatattgat
     4201 atgggtgatg atcactggga agtggtaaat ttcctgcgtg actattacga agaatatcag
     4261 attgcaccgg ctgttcgcgt gttgaccaaa gcggtcaaga aatctctcgg accagaaaaa
     4321 ggcaacagca aatatcttta tgagttattc ccctacggcc cagctaaaca agcttgtaaa
     4381 atcgcaggtt tgccgaagcc gaccggctgc gtctaaatct gcgcattctt tttcacctgg
     4441 gggctaggag tctcaattga ccgctgccta tgccatttta ttttattctg cgaccttaat
     4501 attggtcatc gggctgattg ttaaaatcaa gcaatatgcc acaacaccgg caccattgaa
     4561 gattccgaca acgccagcgc cgacgaccaa acagggcgtt gtgttgcgta tggcacgtga
     4621 aattattttt tttcaaagtc tatttcgcgc caataaatgg atctggctat ttggttggat
     4681 gtttcacatc gcgctggtgc tcgtgttgg
//
LOCUS       DASCNL010000167         1289 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000381669, whole genome shotgun sequence.
ACCESSION   DASCNL010000167 DASCNL010000000
VERSION     DASCNL010000167.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000381669"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..740)
                     /gene="ribD"
                     /locus_tag="QF359_02220"
     CDS             complement(<1..740)
                     /gene="ribD"
                     /locus_tag="QF359_02220"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HJO85753.1"
                     /translation="MKAALNLAQRGLGNVWPNPAVGCVIVQNGRVVGRGWTQPSGLPH
                     AETEALQRAADLAQGATAYVTLEPCNHQGQTPPCTEALIEAGIKKVVIPTSDPDLRVA
                     GTGITRLKEAGIDVDLGVCRAEANQINQGFFSRVELQRPLFMLKIATTLDGKIATQTG
                     ESQWITGEMARRTAHLLRASHDAVLIGSGTALADNPSLTCRLPGISNERRHRIVLDGR
                     LRLPIECNLVKTAQKVPVTIFTLPGNEE"
     gene            complement(781..1233)
                     /gene="nrdR"
                     /locus_tag="QF359_02225"
     CDS             complement(781..1233)
                     /gene="nrdR"
                     /locus_tag="QF359_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HJO85754.1"
                     /translation="MRCPFCGHNDTQVKDSRPTEDNSAIRRRRSCPECGARWTTFERV
                     QLRELTILKKNDKKEPFDRDKLARSLRISLQKRPVDPDQVERIITSIQRRLESLGENE
                     VPSKVIGEMVMDVLADLDSVAYVRFASVYRNFREARDFEDFIGSLSDD"
BASE COUNT          319 a          329 c          306 g          335 t
ORIGIN      
        1 ttttcctcat tgccaggtaa cgtaaaaatg gtgacgggca ctttttgggc agtcttaacc
       61 agattgcatt ctattggcag tcttaatctg ccatctaata caatacgatg gcgacgctca
      121 tttgaaattc ccggcaaacg acaagtcaaa gacggattgt cggcaagagc agtaccgctg
      181 ccaatcaaaa ccgcatcgtg agatgccctc aggagatggg cggtgcgtct cgccatttca
      241 ccggttatcc attgactttc accggtttga gtggcgattt tgccgtctaa agtggtcgca
      301 attttgagca taaacagcgg gcgttgcagt tcaacccgtg aaaaaaagcc ctgatttatt
      361 tgattggctt cagcccggca aacaccaaga tcaacgtcaa ttccagcctc tttcaaacga
      421 gtgatgccgg tcccggccac ccgcagatcg gggtcactcg ttggaataac aacttttttg
      481 atgccggcct caattaaagc ttcggtgcaa ggtggtgttt ggccttgatg gttgcagggc
      541 tccaaggtga cataagctgt cgcgccttga gctaaatctg cagctcgttg aagcgcttcg
      601 gtttcggcat gaggaagtcc cgacggctgg gtccaaccgc gccccactac tctgccattc
      661 tgaacgatta cgcaaccaac cgctggatta ggccatacat tgccaaggcc acgctgcgcc
      721 aaattgagcg ctgctttcat gtgattggta gggtcgtcag tggtgagtgt tcctgcagga
      781 tcagtcgtca cttaaactcc ctataaagtc ttcaaaatca cgcgcttcac ggaaattcct
      841 gtaaactgaa gcaaaacgga cataagcgac agaatcaaga tcagccagca cgtccatcac
      901 catttcacca atcactttgg acggcacttc attttcgccc aagctttcca gccgccgttg
      961 aatagaagtg atgatgcgtt caacctgatc tggatcgacg ggtcgtttct gcagtgaaat
     1021 acgcaaagac cgcgcgagtt tatcgcgatc aaatggttct ttcttatcgt tcttttttaa
     1081 gatcgtgagt tcgcgcaatt ggacccgctc gaaagtggtc caacgggcac cacattcagg
     1141 gcaagaccgt cgtcgccgaa tagccgaatt gtcttcggtt gggcgcgagt ctttgacctg
     1201 agtgtcatta tgaccacaaa atggacaacg cataattctt tccccttttt tatgaacgtc
     1261 tgttcatacc cagtttaaag ttaaaaatt
//
LOCUS       DASCNL010000168         2636 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000382170, whole genome shotgun sequence.
ACCESSION   DASCNL010000168 DASCNL010000000
VERSION     DASCNL010000168.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2636)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2636)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2636
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000382170"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="QF359_02230"
     CDS             <1..249
                     /locus_tag="QF359_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain fatty acyl-CoA regulator family
                     protein"
                     /protein_id="HJO85755.1"
                     /translation="VGYKMPEQQLAIGIGCKLDYARQIVYTDGLDLSDTSSITPIGVN
                     CRLCMRMDCNQRANPPLNRRVAVAENHRGMSPFTFAEL"
     gene            complement(502..1596)
                     /gene="rlmN"
                     /locus_tag="QF359_02235"
     CDS             complement(502..1596)
                     /gene="rlmN"
                     /locus_tag="QF359_02235"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007006095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HJO85756.1"
                     /translation="MPDASATKNLIGLSREELTAELVGIGEKAFRSKQLWHWIYHQGE
                     TDFDKMTTLGKPLREKLKESCVVRKPEIVTEQLSEDTTHKWLLRTQDGNEVEAVFIPE
                     DGRGALCLSSQVGCTLTCSFCYTGTQKLVRNLTAAEIIGQVMIARDSYNEWPSNGHDR
                     QLTNIVMMGMGEPLYNFDEVAKAIKIILDEEGISLSRRRITLSTSGVVPLIERCGEEL
                     GVGLAVSLHAVRDELRDVLVPINKKYPIAELLEACRKYPGANNARRITFEYVMLDGIN
                     DSAADAKKLARLLKDMPAKINLIPFNKWPGVEYECSSHLRIKQFSEILNERGLSAPIR
                     MPRGRDIMAACGQLKSASERVRKKPQQPAA"
     gene            complement(1597..2118)
                     /locus_tag="QF359_02240"
     CDS             complement(1597..2118)
                     /locus_tag="QF359_02240"
                     /inference="COORDINATES: protein motif:HMM:NF018482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HJO85757.1"
                     /translation="MSNCLKHYLGGFLTGAVLSFLSFDGQAQTLINNFEDWSAFADGK
                     GKAKTCYIASVPKKETGKYKSRSNTYILVTHRPAEKSHDVFELRAGYVYRKDSEVVVN
                     IDGQVYKLFTDRGTAWARDPKTDRSLARMMIRGKSMIVTGFSSRGTKTIDTYSLSGFT
                     AAYKAIGKACGVK"
     gene            complement(2115..>2636)
                     /locus_tag="QF359_02245"
     CDS             complement(2115..>2636)
                     /locus_tag="QF359_02245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HJO85758.1"
                     /translation="GADFMFTVNAVYTRHAGGRADTSDAPTHVPFYSFPDIKSMVLPE
                     GCELVGIELIDEAIDLPSFRHPRQAAYILGPERGSLSPEMIDRCSFTIKIPTKFCINV
                     GLAGAIVMYDRVKSLGKFARRPETLGGELEPLPDHVYGGPTQRTQKDQYLDTPPDTHH
                     GQEELQEELVEEE"
BASE COUNT          667 a          697 c          624 g          648 t
ORIGIN      
        1 gtcggctata agatgccgga acaacaactc gccattggca tcggctgcaa actcgattat
       61 gcccggcaga ttgtctatac cgacgggctt gatctctcgg acaccagctc aatcacgccg
      121 atcggcgtca attgccggct gtgcatgcgt atggattgca accagcgcgc caatccaccc
      181 ctcaatcgcc gggttgccgt cgccgagaat caccggggaa tgtcaccgtt cacttttgct
      241 gaactttaag ccaatacctt acatttaatc gattaacgag acgccacgga ataccctagg
      301 atgtaaaccc ttaaatttta ccggaaaacg cgcttaataa agtgaagcgt ggaccggaac
      361 ggcgccagcg gaaaatgaag gcaccagaaa gtatggagca ccacaaaagt agaggccgtc
      421 gcgattccaa caatcagaac aaaaccgttt ggtagcagta acaaataatt agttgaagaa
      481 gcgttcattt gggcgccttt tttatgctgc cggttgttgt ggtttcttgc gcactctttc
      541 actggcggat ttaagttggc cgcaggcagc catgatatca cgcccgcgcg gcatacggat
      601 cggcgcgctg agaccccgct cattaagaat ttccgaaaac tgcttaatcc taagatggga
      661 cgagcattca tactcaacac ccggccactt attaaacggg atcagattga tcttggcggg
      721 catgtctttg agcaaacgtg ccaatttttt agcatcggca gccgaatcat tgatgccatc
      781 aagcataaca tattcaaagg tgatacgccg ggcgttattg gcgccgggat atttacggca
      841 ggcttccaat agttccgcga tcggatattt cttattaatc ggcaccaaaa cgtctctgag
      901 ctcatcccta accgcatgca acgaaacagc aaggccaaca cctaactctt cgccgcagcg
      961 ttcaatcaac ggcacgacgc ccgaggtcga gagcgtaata cgccgccgcg agagcgaaat
     1021 gccttcttca tccagaataa ttttaatcgc cttggcgact tcgtcaaaat tatagagcgg
     1081 ttcccccatg cccatcatga caatattggt gagctgccgg tcatggccat ttgacggcca
     1141 ctcattatat gaatctctag ctatcatcac ctgaccaatg atttccgccg ccgtcagatt
     1201 gcgcaccagc ttttgcgtac cggtgtaaca gaaggaacag gttagcgtgc aaccaacttg
     1261 cgacgacaga cagagcgcac cgcgaccgtc ttccgggata aagaccgctt cgacctcgtt
     1321 gccatcttga gttctcaata accatttatg ggtggtgtct tcggataact gctcagtgac
     1381 aatttcgggt ttccgcacaa cacaagactc tttcagcttt tcccggagcg gcttacccaa
     1441 ggtcgtcatc ttatcaaaat cggtctcacc ctgatggtat atccagtgcc acagctgctt
     1501 ggagcgaaat gccttttcac cgatgccgac aagttcagct gtcaattctt cgcggctaag
     1561 cccgatgaga tttttcgttg cagatgcgtc cggcatttat ttaacgccac aggccttacc
     1621 gatggctttg taggccgcgg taaaaccgct caaggaatag gtatcgatgg ttttggttcc
     1681 ccggctggaa aagccggtga caatcatgga tttgcctctg atcatcatgc gggcaagcga
     1741 gcgatcggtc tttggatcac gcgcccaggc tgttccccgg tcggtaaaca acttatagac
     1801 ctgaccatca atattgacga ccacttcact gtctttacga tagacatagc cggcgcggag
     1861 ctcaaataca tcgtggcttt tttccgccgg acggtgggtt accagaatat acgtattgct
     1921 gcgtgattta tatttaccgg tttccttttt cggcacactg gcgatatagc aggttttagc
     1981 tttaccttta ccatcggcaa aagcactcca atcttcaaaa ttattgatca gtgtctgcgc
     2041 ctgaccgtca aaggataaga acgataaaac ggcaccggtg agaaaaccgc ctaaataatg
     2101 tttcaaacaa ttactcattc ttcttccacc agttcttctt gtaattcttc ttggccatga
     2161 tgtgtatcag gtggcgtatc gagatattgg tccttttgcg tccgttgagt gggcccgcca
     2221 taaacatgat ccggcaaagg ctcaagctcg cctcccagcg tttccgggcg gcgggcaaat
     2281 ttgcccagcg attttacccg atcatacatt acaatggcac cggcaagacc gacattgatg
     2341 cagaattttg tcggaatttt gatcgtaaag ctgcatctat caatcatttc cggtgagagg
     2401 gaacctcgtt ccggcccaag aatataggct gcttggcggg ggtggcgaaa acttggtagg
     2461 tcgatcgcct catcaatcag ctcaatgcca acaagttcac agccttccgg caagaccatc
     2521 gatttaatat caggaaaact gtaaaacggc acatgggtgg gtgcatccga ggtgtcggcc
     2581 cgcccgccag cgtgacgggt ataaaccgca ttgacggtaa acataaaatc agcacc
//
LOCUS       DASCNL010000169         1378 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000382479, whole genome shotgun sequence.
ACCESSION   DASCNL010000169 DASCNL010000000
VERSION     DASCNL010000169.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1378)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1378)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000382479"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="QF359_02250"
     CDS             <1..246
                     /locus_tag="QF359_02250"
                     /inference="COORDINATES: protein motif:HMM:NF023785.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85759.1"
                     /translation="HEDGLQISPALAKVYTNQEAHDPADINRAREIASFTDIIPVGVL
                     YQNSNIPRYDDIRRPRGVYTNEKIRAGIEEELDKYTI"
     gene            279..>1378
                     /locus_tag="QF359_02255"
     CDS             279..>1378
                     /locus_tag="QF359_02255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85760.1"
                     /translation="MKSATVRKLKTKKRQALDQSLLANTVPAALVRRRDLSKLRYDFP
                     LILTRDANANDQEFIFTLSGVIDKILLKIALPGGTGEQLRSHILRLEQEIRTLAQQGT
                     NGSLIELWELAAAKLLSEADDSGTIEQSIDEARKVLTIEGEIVDCDGDMPSRLMALAC
                     FTVRESRAEDFRLRVNRLIVRLTDILHADYHKSDKARTSDSLKRSVGTGYEQVFDFNE
                     MSRILSFGTARDLLSKSRRQRIEATLKALKSQKFFALTPAADSGIYEYEFDSCAKVIA
                     AFQQRLPEIANLIKAINIADLEIANTYLEAKHDSYFDSFDEASISTQDLALFPPYLVC
                     LDGDHLDDTGIGEILAILSSSTPIKILFQTNT"
BASE COUNT          389 a          335 c          323 g          331 t
ORIGIN      
        1 catgaagatg gacttcaaat aagtcctgca ctagcaaaag tttacaccaa tcaggaagcc
       61 cacgacccag ccgacataaa ccgggcccgg gaaattgcct catttaccga tattatcccg
      121 gtcggcgtgc tttaccaaaa ctctaatatt ccccgctatg atgacattcg gcggccccgt
      181 ggagtttata ccaacgagaa gatcagagcc gggatcgagg aagagctgga taaatataca
      241 atttaactat tgaacctaaa atcagaagcg aaaatgctat gaaatcagct acggttcgta
      301 agcttaagac aaaaaaacgc caagcattag accaatcact gctggccaat acggtgccag
      361 cggcgcttgt caggcgccgg gatctcagca agcttcgtta tgacttcccg ctgatattga
      421 cccgtgacgc caacgccaat gatcaggaat tcatcttcac cctgtcgggt gtcattgata
      481 aaattttact caaaatcgca ctaccgggtg gcacaggcga acaactacga agccatattt
      541 tacgccttga acaggaaata cggacgcttg cccagcaagg aaccaacggc tccttgatcg
      601 agttatggga attggcggcg gccaaacttt taagcgaagc tgacgatagt ggcacgattg
      661 aacagagtat cgacgaggca cggaaggtct taacgatcga aggcgagatc gtcgactgtg
      721 atggtgacat gccctcccgg cttatggcgc tggcttgttt taccgtacgg gaatcaagag
      781 ccgaggattt ccggcttagg gttaatcggc tcattgtccg gctcactgat attctgcacg
      841 cggattacca taaatctgat aaggcacgga catcggatag tctcaaacgg tcggttggca
      901 cgggttatga gcaagtattc gatttcaatg aaatgtcccg tattctgtct tttgggactg
      961 cccgggattt attgtctaag agccgccggc aacggattga agcaacctta aaagccctca
     1021 aatcacaaaa gttttttgcc ctgacaccag ctgctgacag cggtatttat gagtatgaat
     1081 tcgatagctg tgcgaaagtg atcgccgcct tccagcagcg cttgccagag atagccaatc
     1141 tgattaaggc aattaatatc gccgatttgg aaatcgccaa cacttaccta gaagcaaaac
     1201 acgacagcta ttttgatagc ttcgatgaag catcaatatc gactcaggat ttagctttgt
     1261 ttccgcccta tttggtttgc ctggacggcg atcatctcga cgacaccgga ataggcgaaa
     1321 ttttggccat tctttcatcg tcaacgccga taaagatatt attccaaacc aatactat
//
LOCUS       DASCNL010000170         1448 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000384903, whole genome shotgun sequence.
ACCESSION   DASCNL010000170 DASCNL010000000
VERSION     DASCNL010000170.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1448)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1448)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1448
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000384903"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1448
                     /locus_tag="QF359_02260"
     CDS             <1..>1448
                     /locus_tag="QF359_02260"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HJO85761.1"
                     /translation="LIAWVDEMAGLTKPDNIQWCDGSKEEFDRLCAEMVEAGSLTPLN
                     PEKRPGSFLANSDPDDVARVEDCTFVCSKDKKDAGPTNNWTDPVEMKATMNGLFDSSM
                     QGRTMYVIPFSMGPLGSPIAHIGVQLTDSPYVAASMRVMTRMGQAALDVLGDEGDFVP
                     CMHSVGAPLANGETDVPWPNNKTKYIVQYPEERAIWSYGSGYGGNALLGKKCFSLRIA
                     SVMARDEGWLAEHMLILGLESPAGEKTYVAAAFPSACGKTNLAMLIPPEGFDGWKVRT
                     VGDDIAWIKPGDDGRLYAINPEAGYFGVVPGTSSKTNPSAMTMMESNTIFTNVALTDD
                     GDVWWEGHDDDPPEHLIDWKGNDWTPDSDTPAAHPNARFACATSQCPTADPAWDDPAG
                     VPISAFMFGGRLSHTFPLVYQSLNWEHGVFMAATMGSEATAAAVNQASIRRDPMAMLP
                     FCGYNMADYWSHWLKLGQTLKNPPKIFRVNWFR"
BASE COUNT          338 a          382 c          393 g          335 t
ORIGIN      
        1 ctaatagcct gggtcgatga gatggcaggc ctgaccaaac cggacaacat tcaatggtgc
       61 gatggatcaa aggaagaatt tgaccggctc tgcgccgaaa tggttgaggc tggttcgtta
      121 acaccgctta atcccgaaaa acgcccaggg tcttttctgg ctaattctga tcctgatgat
      181 gttgcccggg tcgaagactg tacctttgta tgctctaaag ataaaaaaga tgccggcccg
      241 accaacaact ggaccgatcc ggtcgaaatg aaagcaacta tgaacggctt gttcgacagt
      301 tccatgcagg gccgtaccat gtatgtcatt ccgttcagca tgggcccgct gggctcacca
      361 attgctcata ttggcgtaca attaactgac agcccttatg tggcggccag tatgcgggtg
      421 atgactcgga tgggtcaggc cgcgcttgat gtgctcggtg atgaaggtga ttttgtacct
      481 tgcatgcact cggtaggcgc gcctttggcg aacggcgaaa ctgatgtgcc atggcccaat
      541 aataagacca aatacatcgt ccaataccca gaagaacgcg cgatttggtc ttatggcagc
      601 ggctatggcg gcaatgcgct attgggtaaa aaatgcttct cgctcagaat tgcttcggtg
      661 atggcgcggg atgagggctg gctcgctgag catatgttga tccttggcct cgaatcaccg
      721 gcaggtgaaa aaacctatgt tgctgccgct ttccccagtg cttgcggtaa aaccaatctc
      781 gccatgctga ttccaccgga aggctttgac ggctggaaag tccgcaccgt cggcgacgat
      841 attgcctgga ttaaaccagg agatgatggc cggctttatg cgatcaatcc tgaagctggt
      901 tattttggcg tcgtgccggg cacgtcgagc aaaacaaatc ccagcgccat gacaatgatg
      961 gaaagcaaca ctatcttcac taatgttgct ctgaccgatg atggtgatgt ctggtgggaa
     1021 ggccacgatg atgacccgcc tgaacattta attgactgga aaggcaatga ctggacaccc
     1081 gacagcgaca ccccggcagc ccatcccaac gcacggtttg cctgcgcgac cagccaatgc
     1141 ccaaccgctg acccggcctg ggatgatccg gccggcgtgc cgatcagcgc ctttatgttt
     1201 ggtggccgct taagccacac tttcccgctg gtctatcaat cgctcaattg ggagcacggg
     1261 gtttttatgg cagcaaccat gggctctgaa gctaccgcag ctgctgtcaa tcaagcgtcc
     1321 attcgccgcg atccgatggc gatgctgccg ttttgcggct acaacatggc tgattattgg
     1381 tcacactggc tgaagcttgg ccagaccctc aaaaatccac caaaaatttt ccgcgtcaat
     1441 tggttccg
//
LOCUS       DASCNL010000171         1849 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000385876, whole genome shotgun sequence.
ACCESSION   DASCNL010000171 DASCNL010000000
VERSION     DASCNL010000171.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000385876"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="QF359_02265"
     CDS             <1..327
                     /locus_tag="QF359_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85762.1"
                     /translation="KDASVSGLSLGLTASGTLNTAVETIDIKGTIVPAYAINNVLNNV
                     LTNIPIIRLLFSEEGGVFAATYTVTGNVKKPDISTNPLSILAPGILRKLFGIFEGAPK
                     KASSDK"
     gene            complement(336..1592)
                     /gene="tyrS"
                     /locus_tag="QF359_02270"
     CDS             complement(336..1592)
                     /gene="tyrS"
                     /locus_tag="QF359_02270"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HJO85763.1"
                     /translation="MTTYKSDFINAVTERTFMHQCTDIEALDERASREIIPAYIGFDC
                     TAPSLHVGSLLPVMLLRWLQKTGHKPIVLMGGGTTKVGDPSGKDESRQLLTIEKINEN
                     MEGIKSIFAKYLTFGDGPTDAIMVNNADWLDKLEYIDFLRSYGSHFTINRMLTFDSVK
                     LRLEREQPLTFLEFNYMILQAYDFLELSRRNYCLMQMGGSDQWGNIVNGIELGRRVDS
                     TQLFGLTTPLMTTSSGAKMGKTATGAIWLDQEQLSAYDFWQYWRNTEDADVGRFMRLF
                     TELPLDEITRLEKLQDAEINEAKKILAGEVTKLCHGEDAAKLAAKTAKDTFEGAGISA
                     DLPTIELTKSDLEAGITAFELFRQAGLANSNGEARRLIKGNGAKLNDSVIADESQMIT
                     LADNNADGVIKLSAGKKRHILIRATE"
     gene            1732..>1849
                     /locus_tag="QF359_02275"
     CDS             1732..>1849
                     /locus_tag="QF359_02275"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HJO85764.1"
                     /translation="MADAKIYTALGLMSGTSLDGIDAAVIQTDGTSIHSFGPF"
BASE COUNT          465 a          444 c          427 g          513 t
ORIGIN      
        1 aaagatgcgt ccgtatcggg attgtcttta gggctgacag cgtcgggtac attgaataca
       61 gccgttgaaa ctatcgatat caaaggtacc attgtgccgg cctatgccat caataatgtg
      121 ctgaataacg tgctgaccaa catcccgata atcaggcttt tattttccga agaaggtggc
      181 gtgtttgctg cgacctacac cgtgactggt aatgttaaga agcctgatat atcgactaat
      241 ccgttgtcga tactggcgcc agggatattg cgcaaactct tcggcatctt tgagggcgcg
      301 cccaaaaaag catcgtctga caaataatcc tattattatt cggtagcacg gatcagaatg
      361 tgacgttttt tcccagccga caattttatc accccgtcag cattattatc ggcgagggtt
      421 atcatctgac tttcatccgc tatgacactg tcatttagtt ttgcgccatt acctttgatc
      481 aaacggcggg cttcaccatt cgagttggcg agaccggctt gacgaaataa ttcgaaggct
      541 gtaatacccg cttccagatc gcttttggta agctcgatag ttggtaagtc ggcactaata
      601 ccagctccct cgaaggtatc ttttgctgtc tttgccgcca acttagcggc atcttcaccg
      661 tggcaaagtt tggtcacctc gccagcgaga attttcttgg cttcattgat ctcagcatcc
      721 tggagctttt caagtcgcgt gatttcgtca agtggcaact cggtaaacaa acgcatgaaa
      781 cggccgacat cggcatcttc cgtgttgcgc caatattgcc agaagtcata ggccgacaac
      841 tgttcttgat cgagccaaat tgcacccgtc gcggttttac ccattttggc cccggatgat
      901 gtggtcatta atggtgtcgt cagcccgaac aactgcgtgc tgtcaacgcg acgccccaat
      961 tcaataccat tgacgatatt gccccattga tcagagccgc ccatttgcat caggcaatag
     1021 ttacggcgtg atagttctag aaaatcatag gcctggagga tcatgtagtt gaactccaag
     1081 aaggttagcg gttgctcgcg ctccaggcgc agtttcacac tatcgaaagt aagcatacgg
     1141 ttaatcgtaa aatgtgagcc ataggagcgc agaaaatcaa tatattccag cttatctagc
     1201 caatcagcat tattgaccat gatcgcatct gtcgggccgt ctccaaaggt caggtatttg
     1261 gcaaagatag atttaatacc ctccatattt tcgttgattt tctcaatggt caatagctgg
     1321 cggctttcat ctttacctga cgggtcaccg accttggtcg tgccgccgcc catcagtaca
     1381 attggtttgt ggccggtctt ttgcagccac ctgagtagca taaccggcaa caaagaaccg
     1441 acatgaaggc tgggtgccgt gcaatcaaat ccaatgtaag ctggaatgat ctccctcgag
     1501 gctcgctcat ccaatgcttc aatgtcggtg cattgatgca tgaaagtccg ctcagtgacg
     1561 gcgtttataa aatctgattt gtaggtcgtc atgtttcaat atggctcaat agtattttaa
     1621 gggttgagcg ggtatgttgc ttcataattg ggtggtcgtt tagcatactc atcttgtagg
     1681 cacaacgaaa cccatgataa atctaaacaa tatatctaat ttcattaggt aatggccgac
     1741 gcaaaaatat atacagccct cgggctcatg agcggaactt ccttggatgg catagatgct
     1801 gctgtcatcc aaaccgatgg aacgtccatt cattcattcg gaccgtttg
//
LOCUS       DASCNL010000172         1147 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000386798, whole genome shotgun sequence.
ACCESSION   DASCNL010000172 DASCNL010000000
VERSION     DASCNL010000172.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000386798"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="QF359_02280"
     CDS             <1..192
                     /locus_tag="QF359_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85765.1"
                     /translation="IFITEDDGSCAVDFYVDFEFHSKLLQKMIGVVFNEAVKIMVHAF
                     EKRAAAVYGTVKGGNDLSR"
     gene            complement(214..702)
                     /locus_tag="QF359_02285"
     CDS             complement(214..702)
                     /locus_tag="QF359_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HJO85766.1"
                     /translation="MFPRDVTELTIELISKCRDAGIKVATAESCTGGLIAGCLTSVSG
                     SSDVFERGFNTYSNEAKNEMLGVPLELIKEHGAVSEFVSVAMVEGALKNAPVQLTVAV
                     TGIAGPSGGTPEKPVGTVQIASACEGKPTINKHFLFEGDRDAVRLATIKKALEMMLKQ
                     FG"
     gene            complement(708..>1147)
                     /locus_tag="QF359_02290"
     CDS             complement(708..>1147)
                     /locus_tag="QF359_02290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HJO85767.1"
                     /translation="FGAGLLPIAPGTWGSIAALPLAYVLVYWGSLEIFAVATIVVFII
                     GVWASNITTRDMGGGDPSEIVVDEVAGQWLTLLVVPPDLILYACGFLLFRLFDIWKPW
                     PISWTDQKIKGGMGIMLDDVIAGVYAGVLLWLGHFIYLKYFAG"
BASE COUNT          314 a          296 c          257 g          280 t
ORIGIN      
        1 atatttatca ccgaagacga tggttcttgc gccgttgatt tctatgtcga ttttgagttc
       61 cattcaaagc ttttgcaaaa aatgatcggc gtggtgttca atgaagcggt caaaataatg
      121 gttcatgcat tcgaaaaacg cgcggctgcg gtatacggga cagtgaaagg cggtaacgac
      181 ttatcccgtt gatgtatgta ggtaggaaac tctctaaccg aactgcttca acatcatttc
      241 cagtgccttt tttatcgtcg ccaggcgcac ggcatcacgg tctccttcaa atagaaaatg
      301 tttgttgatg gtaggcttgc cttcacaggc tgaggcaatt tgcaccgtac ccactggttt
      361 ttccggcgtg ccgccacttg gtccggcgat accagtaacc gcgacagtta gctgaaccgg
      421 agcatttttt agcgctcctt cgaccatcgc aacagagacg aactcgctca cggctccatg
      481 ttctttgata agctccaacg gtacaccaag catttcgttt ttagcctcgt tcgaataggt
      541 gttaaaacca cgttcaaaca catctgaaga tccggaaact gaggttaggc agccggcaat
      601 caatccaccc gtgcaggatt ccgcggtggc gactttaatc ccggcgtcgc ggcatttgct
      661 gataagctcg atggttaatt ctgttacgtc tcttgggaac atctcaatca acctgcaaaa
      721 tatttcaaat atataaaatg ccctaaccag agcaggacgc cagcataaac gccggcgatc
      781 acatcgtcta acatgatacc catcccgcct ttgatttttt gatcggtcca ggaaattggc
      841 cagggcttcc aaatatcaaa taaccggaac aacagaaatc cacaggcgta taggatcaaa
      901 tcaggtggta cgacgagaag cgtcagccat tgtccggcga cttcatcaac gacaatttca
      961 gatggatctc cgcctcccat atcacgagta gtaatattcg acgcccagac gccaataata
     1021 aataccacaa tcgttgcgac cgcgaaaatt tccaggctac cccaataaac aagtacatag
     1081 gctaagggca aggcagcaat agaaccccag gtgcccggtg ctattggtag caatccggcg
     1141 ccaaacc
//
LOCUS       DASCNL010000173         1331 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000386802, whole genome shotgun sequence.
ACCESSION   DASCNL010000173 DASCNL010000000
VERSION     DASCNL010000173.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1331)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000386802"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(74..415)
                     /locus_tag="QF359_02295"
     CDS             complement(74..415)
                     /locus_tag="QF359_02295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO85768.1"
                     /translation="MKVNRLSDVEAYEASGHFDMKGFRLQGHDASDAENFWVGLSYFL
                     PGGGTTHTATPLEKVYVCVGGAITIKTDKGEATLENLDSIYLEPGEGRSIINNTNEIA
                     TILVIMPYPPK"
     gene            641..>1331
                     /locus_tag="QF359_02300"
     CDS             641..>1331
                     /locus_tag="QF359_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrogallol hydroxytransferase large subunit"
                     /protein_id="HJO85769.1"
                     /translation="MGSLMFSLMLFGLRLLIWMQALRYQAFRDRLKEKNFTAQMKTKD
                     NSVGRWFKFQDGKVSSGSGVKADADIALTFKTSEIAVRLLMPPIDQLEQINAMKDFLL
                     SLEGPDELTSWFTQTVMMTQTVGWKYGVDMGGSITRFANMTNGGPVFLYVKNNKLIRI
                     TPIDFDDNDPEPWTIKARGKTFKPPRKTTLAPHGMNWKSMLNSPDRLLYPMKRVDFDP
                     NGERNPQNRGIS"
BASE COUNT          366 a          333 c          290 g          342 t
ORIGIN      
        1 ggaacaataa atccaaccaa tttaccccat tgtctgattt tgcgaatttg ttggaacaat
       61 aaaaaattag ccgctatttc ggcggatagg gcatgatcac caagatcgtg gctatttcat
      121 tggtattatt gatgatcgag cggccttcac cgggctccag ataaatcgaa tcgagatttt
      181 ccaaagtcgc ctcgcctttg tcggttttaa tcgttatcgc accgccaacg cagacataaa
      241 ctttttccag cggcgtcgcc gtatgcgtgg tgccgccacc cggcagaaaa taagaaagcc
      301 cgacccagaa gttctcagca tcgctggcgt cgtggccttg caggcgaaac cctttcatgt
      361 caaaatggcc actggcctca tatgcttcga cgtcgcttaa acgattgact ttcataattt
      421 tcccccaatt cgtggattaa aaagatggca gacactatcg agattattat tttccgtcaa
      481 ctgaacccat tttcagtaat aaacataaat cccacattat gagatttata tttacatctg
      541 gaattagccg gatacaatca ctttaaatca aataacgaca tgaaatctca gcctctgcag
      601 gaggaggatt tcatcgcctt gttcatcgga gaagatagtt atgggctctt taatgttttc
      661 acttatgctg tttggtttgc ggctgcttat ttggatgcaa gcgctacgct accaggcctt
      721 tcgcgatcgc ctaaaagaaa aaaacttcac cgcccaaatg aaaactaagg acaattcagt
      781 tggccgctgg tttaaatttc aagacggcaa agtctcgtcc ggcagtggtg tcaaagccga
      841 cgccgacatt gcattgacct tcaaaacctc tgaaattgct gtccggctat taatgccgcc
      901 gattgatcag ctcgaacaga tcaatgcgat gaaggacttt ctcttgagcc tcgaaggccc
      961 ggatgagctg acctcctggt ttacccagac tgtgatgatg acccaaacgg ttggctggaa
     1021 atacggtgtt gacatgggtg gcagcatcac ccgctttgcc aatatgacca atggcggccc
     1081 ggtttttctc tatgtcaaaa acaacaaact cattcgcata acaccgattg acttcgatga
     1141 taacgatcct gagccttgga caatcaaagc gcgcggtaaa acctttaaac caccgcgcaa
     1201 aaccacgctg gcaccgcacg gcatgaattg gaaaagcatg ctcaattcac cggaccggct
     1261 gctttatccg atgaagcggg tcgattttga tccaaatggc gaacgtaatc cgcaaaaccg
     1321 gggcatctcc g
//
LOCUS       DASCNL010000174         1038 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000391028, whole genome shotgun sequence.
ACCESSION   DASCNL010000174 DASCNL010000000
VERSION     DASCNL010000174.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000391028"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(30..>1038)
                     /locus_tag="QF359_02305"
     CDS             complement(30..>1038)
                     /locus_tag="QF359_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HJO85770.1"
                     /translation="SFRIYPNGSGLADRAAISIIDDLGGVGTLNDTEELIEPSKTASL
                     MRFATYASVSVATVLIVIKTGAWFATESVSLLSSLVDSLLDVGASVVNLIAVRHALQP
                     ADRDHRFGHGKAEALAGLAQAAFIVGSGAFLLLESVDRFIQPREISNSETGIIIMIIA
                     IVMTLLLVGFQSYVVKQTGSVAISADSLHYRADILVNVAVIVSLVLASNLQWYIADPI
                     FAILIVAYMSIGAYKIAMQSMGVLMDKEFTDEDRWRIKEIAESHAKVLSVHDMRTRSS
                     GATSFIQFHVEMDKEISLAEAHDIADEVMYMVEAAFPNTEVLIHQDPEGVDERRDDIQ
                     E"
BASE COUNT          302 a          263 c          233 g          240 t
ORIGIN      
        1 atattagaaa aacctttacg aaataatacc tattcctgaa tatcgtcccg gcgctcatca
       61 acaccttcag ggtcttgatg gatcaatact tcggtgttgg gaaaggccgc ttcgaccata
      121 tacatgactt catcagcgat atcgtgcgcc tcagcaagcg aaatttcttt atccatttcg
      181 acatgaaatt gaataaaaga cgtcgcgcca gaagaccgcg tccgcatatc atgaacacta
      241 agaactttcg catgactttc ggcgatttcc ttgatgcgcc accggtcttc atcggtaaat
      301 tccttatcca tcagtacacc catcgactgc atggcgatct tgtaagcacc gatcgacatg
      361 taagcgacaa ttaaaattgc gaatattgga tcggctatat accactgcaa attgctagcg
      421 agtacgaggg aaacaatgac cgcgacattg accaaaatgt cagcacgata gtggagcgag
      481 tcggcactaa tcgcgaccga accggtttgc ttgacgacat aactttgaaa acccaccagc
      541 agcagagtca taacaattgc aataatcata ataatgatac cggtttcact gttggaaatt
      601 tcgcgtggct ggataaagcg atcgactgat tcgagcagca gaaaagcacc tgaacccaca
      661 ataaatgcgg cttgagccaa gccggctagt gcttcagctt taccgtgacc aaagcgatga
      721 tcccggtcgg ccggttggag cgcatggcgg accgcgatca aattcaccac ggacgcgcca
      781 acatccagca gagaatctac taaggaagat aataaactga cggattcagt ggcgaaccac
      841 gcgccggttt tgatgacaat aagaacggtc gcgactgaaa ccgaggcata ggtcgcaaac
      901 cgcatcaaac ttgcagtttt ggatggctct atcagttctt ccgtatcgtt caaggttcct
      961 accccaccaa ggtcgtcaat tatggatata gccgctcggt ctgccaaccc tgatccgttc
     1021 gggtatatac gaaacgat
//
LOCUS       DASCNL010000175         1890 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000397490, whole genome shotgun sequence.
ACCESSION   DASCNL010000175 DASCNL010000000
VERSION     DASCNL010000175.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000397490"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            408..>1890
                     /locus_tag="QF359_02310"
     CDS             408..>1890
                     /locus_tag="QF359_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HJO85771.1"
                     /translation="MPNHTVNVYPSEKPLAKEDQLAWKIAEVAADPIAVSDAVTDMVI
                     NRIIDNASVAIASVNRHPVASARAQAIAHPRAGGGAIFGMPNDQRFHAEWAAWANGTA
                     VRELDFHDTFLAADYSHPGDNIPPIVAVAQQLDKSGADLLRGLATSYEIQIDLVKGIC
                     LHEHKIDHVAHLGPSVAAGIGTLLGLDTDTIYQSVQQALHTTVSTRQSRKGEISSWKA
                     FAPSHAGKLAIEAVDRCMRGEGAPSPIYEGEDSVIAWILDGPDANYTVPLPGPGEAKA
                     AILESYTKEHSAEYQSQALIDLAFRVRENISNWDGVEAIKLFTSHHTHYVIGTGAKDP
                     QKMDPNASRETLDHSIMYILAVALQDGEWHHVRSYTPKRAQREDTVKLWHSISTEEDP
                     AWTARYHDPDPDKRAFGGRLEVTLKSGEKIVDELAVANAHPAGARPFARANYINKFKT
                     LTKGIISNTESIRFLDLVQNLPDLDTAGVGEINVQVDAIDVDSN"
BASE COUNT          484 a          485 c          443 g          478 t
ORIGIN      
        1 cttcgaccat ttcccagcgg tacgatttat ctgacatgcg aattccttta acttaccgtt
       61 ctaatttcta tttgccggat ttatgatcgt ggtcatgttc ctggcggcta atttattctt
      121 gtatttggca aattataggg ccttttgact gattttggta aaacggtact ttaataccga
      181 ttaagagtca ataggttttt tatggttatc caaagatttt tggaatgtct aaaattaacg
      241 cttcttaacc gatatcattt cctttttata aaaagttcgc tttattggtc agaattcgct
      301 tgggaatcga gttcccaatg atgtaagtca tgtcaccagt taaattagag tcgaagattt
      361 aggggccaac acctatttca acgtcgagaa gaaaaggtcc taacagtttg cccaatcaca
      421 ccgttaatgt ttatccgtca gaaaagcctc tggccaaaga agatcaactc gcctggaaaa
      481 tagccgaagt tgcagctgat ccaatcgcgg ttagcgatgc tgtcaccgat atggtgatca
      541 accgcattat tgataatgcc tccgtcgcca tcgcttcggt aaaccgtcat ccggttgcaa
      601 gtgcccgcgc ccaagccatc gcccaccccc gcgcaggtgg tggtgctatt ttcggtatgc
      661 ccaacgatca gcgtttccat gctgaatggg ctgcctgggc caacggcacg gcggttcgcg
      721 agcttgattt tcacgataca tttttggccg ccgactattc gcatcctggc gataatatcc
      781 caccgatcgt cgccgtcgca cagcaattag ataagtcggg tgcggattta ttgcgcggcc
      841 tcgcgacaag ttatgaaatt caaattgatc tggtcaaagg catttgcctg cacgaacata
      901 aaattgatca cgttgctcat ttggggccct cggtagcagc tggtatcggc acgctcttgg
      961 ggcttgatac ggatacgatt tatcaatcgg tgcagcaggc tttgcacacg acagtctcca
     1021 cccgccaatc ccgcaagggt gaaatctcca gctggaaagc ctttgctcca tctcatgctg
     1081 gaaaattagc catcgaagca gttgaccgct gcatgcgggg cgaaggagca ccttcgccaa
     1141 tctatgaagg cgaagacagc gtcatagcct ggattttgga cggacccgac gccaattaca
     1201 cagttcccct gcccggcccc ggtgaagcca aagcggcaat tttggaaagc tataccaaag
     1261 agcactcggc cgaataccaa agccaagcct taatcgatct ggctttccgc gtgcgtgaaa
     1321 acatttctaa ttgggatggt gttgaagcga ttaaactctt caccagccac cacacccatt
     1381 acgtcatcgg taccggcgct aaggacccgc aaaaaatgga ccccaacgcc agccgagaaa
     1441 cacttgatca ttcgatcatg tatatcctag ctgtcgcatt acaggatggc gagtggcatc
     1501 acgtacgctc atacacgccg aaacgcgccc aaagagaaga tacggtcaaa ctttggcatt
     1561 cgatttcgac agaagaagac ccggcatgga ccgcgcgcta tcatgatccg gacccagaca
     1621 agcgcgcctt tggcgggcgt ttggaagtga cactcaaatc cggtgagaag attgtcgatg
     1681 agctggctgt cgccaatgcc catccagccg gtgcccggcc atttgcccgg gcgaactata
     1741 tcaacaagtt taaaacccta accaaaggta ttatttcgaa caccgaaagc attcgctttc
     1801 tcgatctcgt gcagaattta cccgatctgg atacggctgg tgtcggtgaa attaatgttc
     1861 aagttgatgc tatcgacgtc gatagcaaca
//
LOCUS       DASCNL010000176         4388 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000398729, whole genome shotgun sequence.
ACCESSION   DASCNL010000176 DASCNL010000000
VERSION     DASCNL010000176.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4388)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4388)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4388
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000398729"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="QF359_02315"
     CDS             <1..234
                     /locus_tag="QF359_02315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85772.1"
                     /translation="DAWYSRFCRQANARAGGAIGSSNNLNSAGYRSEICIPYCEIYIF
                     CPINLHAERLQIKNEPDIVFLIKKLNNLENSGG"
     gene            236..1804
                     /locus_tag="QF359_02320"
     CDS             236..1804
                     /locus_tag="QF359_02320"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85773.1"
                     /translation="MSKFYLIKSAILASILAASVAFSGNALAQKSKDTLRIAFTDPIS
                     KVDLVYDPKPEIALTARIVYDCLVFFDDFTGKFHPLLAKSWKRISPTVMEFNLRDDVK
                     FHDGSEFDADDVVYTINWLINPKTRIRFKTNYIWISKVEKLSKYKVRISTKRPSAVGL
                     MRLAKSILIYPSDTHSKLKSKATFGRHPIGTGPLKVTQVDPNKGIIMVRNEDYKHGGT
                     WKPKPKIKTIIAKSIPDTQTQMAQLLTGGIDLMRSVPKDQVDSLKSNPALAATATTGL
                     LYTYLSMDSVNRSGKKMLSDQRVRKAISMSFDRLAVARAVLAGGDKVQTLDSMCLRVQ
                     KGCDFSTKPPAFDRAGAKKLLAEAGYPNGFDVNITALGSAGPIAVAVAGELRKVGIRG
                     KVNPVSFGVYRKQQRQGKFEILVSLWSSGGLPDASSTLNVFFAKGRKGKWSPRNYWHD
                     EIINKARIKGGAILDEAKRRAVYKKAYDRVNEKNYIMPISTLPTSFVHTKDLVIEQGS
                     LSPYGAALNHMSWK"
     gene            complement(1859..2851)
                     /locus_tag="QF359_02325"
     CDS             complement(1859..2851)
                     /locus_tag="QF359_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HJO85774.1"
                     /translation="MNQLMGQFGHPDSDAVPALECRNVGRTFMIKKGIFAEKQPLKAV
                     QDVSLQVNRGEVLAIVGESGCGKTTLAKMLLGLLEPTTGEILLDGEPINSVSIKDIAR
                     KVQPVFQDPYSSLNPRKTIEQIISLPLKVHEIGSQASRRARVEEYMRLVGLPKRLIHS
                     YPNQLSGGQRQRVAIARALIMEPKIIVCDEPTSALDVSVQAHILNLLQDLREELNLTY
                     AFISHDLAVVEHLADWVAVMYLGRLIEFGKAVNIFNDPKHPYTRALLDSVLTPDASLG
                     LPEITLGRGLPNPLTPPSGCYFHPRCPEASDQCSAKQPALIKNENRLIECHLYG"
     gene            complement(2854..3867)
                     /locus_tag="QF359_02330"
     CDS             complement(2854..3867)
                     /locus_tag="QF359_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO85775.1"
                     /translation="MSSDTVLEVENLSVDIAVPAGTLHAVSNVNLQVDKGETLCIVGE
                     SGCGKSITSLAIMNLLPRKATLAADKLALEDRDLLSLSEAQFATLRGDRIGMIFQDPM
                     TSLNPVFRIGDQLEEVYIQHGKGGRKEARERAEFLLEKVGIVAPTERLSQYPHQLSGG
                     LRQRMMIAMTLMCDPALIIADEPTTALDVTMQAQTLNLLRSLQKEFNAGLILITHDLG
                     VVARMADRVMVMYAGRAVETGSAEEVFDMPTHPYTQGLIDCIPVPGRTEPGSKLGSIR
                     GIVPALVGDLDGCMFRNRCDLVSDACRSGDIGLIEISAGRAYRCHLSSDESKIKTSVE
                     GAV"
     gene            complement(3867..>4388)
                     /locus_tag="QF359_02335"
     CDS             complement(3867..>4388)
                     /locus_tag="QF359_02335"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO85776.1"
                     /translation="GRIDNFVMYLINVKLDLPGLLVDISLVSVFGGSILALILILSFL
                     FWDRYAVVTRSVTQQIRVNDYITAAQALGTSRTRIIISEVLPNVMNQIIVIASLEMAV
                     AIIVEAALSFLGLGVQPPTPSWGLLLSEGRSYMFFMPYLINFPGLAIFFLVISINMMG
                     DGIRDITAPEGRN"
BASE COUNT         1154 a         1076 c         1081 g         1077 t
ORIGIN      
        1 gatgcttggt attctcgttt ttgccgtcaa gccaatgcgc gcgcgggcgg cgcaattgga
       61 agcagcaata acttgaattc cgccggatat cgttccgaaa tatgcattcc gtattgtgaa
      121 atttatatat tttgcccgat caatttgcat gcagaaaggc ttcaaataaa aaatgaacct
      181 gatatagtgt ttttaattaa aaaattaaat aatttagaga acagtggagg ttgaaatgtc
      241 taaattttat ctgattaaat cagcaattct ggcgtcaata ttggccgcat ctgtagcctt
      301 ttcaggaaac gctttagcgc aaaaatccaa agatacgtta cgcatcgctt ttaccgatcc
      361 catttcaaag gttgatctcg tttatgatcc caaaccggaa atcgcgctga cggcgcggat
      421 tgtttacgat tgtttggtgt tctttgatga tttcaccggc aagtttcatc ctttgctggc
      481 gaaatcctgg aaacgcatca gcccgacagt catggaattc aatctacgcg atgatgttaa
      541 atttcatgat ggctcggagt ttgatgcgga tgacgttgtc tatacaatca attggctgat
      601 caatccgaaa actcgtattc gctttaaaac caactatatc tggatttcca aagttgagaa
      661 actgagcaag tacaaggtac gcatctcgac caaacgtccg tcagctgttg gcctgatgcg
      721 cctggccaaa tcaatcctga tttatccctc ggatacacac agcaaactaa aatctaaagc
      781 cacttttggc cgtcatccga ttggcaccgg tccccttaaa gtaacccagg ttgatcccaa
      841 taaaggcatc atcatggtgc gcaatgaaga ttataaacat ggcggcactt ggaagcctaa
      901 accgaagatc aaaaccatca tcgcgaaatc catcccagac actcaaaccc agatggctca
      961 gttacttacg ggcggcattg atttgatgag aagcgtacca aaagaccaag ttgattccct
     1021 taaatcaaac cctgcacttg ctgcgactgc gactacagga ttgctctaca cttatctgtc
     1081 aatggattca gtaaatcgct ccggcaaaaa aatgttgtct gatcaacgtg ttcgcaaagc
     1141 gatctccatg tcatttgatc gtttggctgt cgcccgggct gtgctggcgg gcggcgataa
     1201 agtgcagacc ttggattcga tgtgtttgcg cgtccaaaaa ggttgtgatt tcagcaccaa
     1261 accgccagct tttgaccggg ccggagccaa aaagcttttg gccgaagcag gttatccgaa
     1321 tggcttcgat gtcaatatta cagcacttgg ttcagccggc ccaattgctg ttgcggttgc
     1381 cggtgaactg cgcaaagtag gcattcgtgg caaagtcaat cctgtgagtt tcggtgttta
     1441 ccggaaacag caacgccagg gtaaattcga aattctagtg agcctgtgga gttctggagg
     1501 tctgccggat gcatcttcga ccttaaacgt gttcttcgcc aaaggccgta agggcaaatg
     1561 gagcccacgt aactattggc atgatgaaat catcaataaa gcgcggatta aaggcggcgc
     1621 catactcgat gaagcaaaac gccgggcggt ttataagaaa gcctatgacc gggtgaatga
     1681 aaagaactac atcatgccga tctcaactct gccaacatcc tttgttcata ccaaagattt
     1741 ggtaatcgaa cagggatcgt tgtcgcccta tggtgcggcg ctcaatcaca tgagttggaa
     1801 atgatataaa tcgaatgacc tatctttatc gggccgttct ttggagcggc cctttttttt
     1861 atccgtagag atgacactcg atcaggcggt tttcgttttt gatgagggct ggctgtttgg
     1921 cgctgcattg atcacttgct tccgggcagc gcgggtggaa ataacacccg ctcggcggcg
     1981 tcagtgggtt gggcaggccg cggccaagag tgatctcggg cagaccaagg ctggcatccg
     2041 gggtgagaac agaatctaat agcgcccgtg tataagggtg cttaggatca ttgaagatat
     2101 tcacggcttt gccgaattca attaaacggc cgagatacat caccgcaacc caatcggcga
     2161 gatgctcaac aaccgctaaa tcatggctga taaaggcgta agtgagatta agctcttccc
     2221 gtaaatcctg tagcaaattc aagatatgag cctgcacgga aacatccagc gctgaagttg
     2281 gttcgtcaca gacgatgatt tttggttcca ttatcagcgc ccgcgcgatc gccacacgtt
     2341 gtcgctgacc acccgacaat tggttcgggt aggaatggat cagacgtttg ggtaacccaa
     2401 ccaaccgcat atattcttcg acccgggccc ggcggctcgc ttgggaaccg atttcatgca
     2461 cttttaatgg cagcgagata atctgctcaa tggttttacg ggggttgagt gaagaatagg
     2521 ggtcttggaa aaccggttgg acctttctcg ctatatcctt aatgctgacc gaattgatcg
     2581 gctcgccatc caataggatt tctccagtgg ttggttccaa taatccgagc agcattttag
     2641 ccaatgttgt tttgccgcaa ccagactcac cgacaatcgc cagcacctcg ccgcgattaa
     2701 cctgaaggct gacgtcctga accgctttaa ggggctgttt ttcggcaaat atgcctttct
     2761 tgatcataaa ggtgcggccg acattgcggc attccagtgc cggaacagcg tcgctatcgg
     2821 gatggccaaa ttggcccatg agctggttca tgattagacc gctccctcaa cgcttgtctt
     2881 gattttgctt tcatccgagc tcaagtggca gcgataagcg cgcccggcgc tgatttcaat
     2941 aagcccgata tcaccggagc ggcaggcgtc actgacaaga tcacagcggt ttctaaacat
     3001 gcagccatct aggtcgccaa ccaaagctgg cacaatgcca cgaatcgacc cgagtttaga
     3061 gccgggttca gtccggcctg gcaccgggat gcagtcgatc aatccttggg tatagggatg
     3121 ggttggcata tcaaaaactt cctctgcaga acccgtttca accgcccgcc cggcatacat
     3181 taccatcacc cggtcggcca tacgcgcaac gacgccgaga tcatgggtaa tcaaaataag
     3241 cccggcgtta aattcttttt gcagggagcg taagagattg agcgtttgcg cctgcatcgt
     3301 cacatcaagc gccgtcgtcg gctcatcggc aatgatcagg gctggatcgc acatcagcgt
     3361 catggcaatc atcatacgct ggcgcaagcc gccggacaat tgatgagggt attgggatag
     3421 gcgctcggtc ggggcaacaa taccgacctt ttcgagcaaa aactcggctc gctcgcgggc
     3481 ttctttgcgg ccacccttac cgtgctggat atagacttcc tctaactggt caccgatgcg
     3541 gaataccgga ttaagggacg tcattggatc ttgaaagatc ataccgatac ggtcgcctcg
     3601 aagtgtcgca aattgagctt ccgataaaga cagcagatca cgatcttcaa gcgctaactt
     3661 atcggctgcc agggtggctt tacgcggcag caaattcatg attgccaggg aggtgattga
     3721 tttaccacag cctgattcgc cgacaatgca aagggtttca cctttgtcga cctgcaaatt
     3781 tacattagac accgcatgca gcgttccagc tggcacggca atatcaaccg ataaattctc
     3841 gacttctaag acggtatctg atgacactag ttgcggccct cgggcgcggt aatgtctcga
     3901 ataccgtcac ccatcatatt gattgaaatc accaggaaga aaatggccag gccggggaag
     3961 ttgatgagat agggcataaa gaacatatag gagcggcctt ccgataacag cagtccccag
     4021 gaaggtgtag gcggttgtac gccaagtcct aagaaagaca aagcagcttc aacgatgatc
     4081 gcaacagcca tttccaaact agcaatgaca ataatttggt tcatcacgtt gggtaatact
     4141 tcgctaatga taatgcgggt tcggctggtg cccagagctt gcgccgcggt aatgtaatca
     4201 ttgacccgta tttgttgggt gacgctacgg gtgaccaccg cataacggtc ccagaacaga
     4261 aaagatagaa tcaatatcaa cgctaggatc gatccgccaa acactgacac taaagatatg
     4321 tcaactagca ggcccggcaa gtccagcttc acattgatca aatacatgac gaaattatct
     4381 atccggcc
//
LOCUS       DASCNL010000177         1355 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000398777, whole genome shotgun sequence.
ACCESSION   DASCNL010000177 DASCNL010000000
VERSION     DASCNL010000177.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000398777"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1039)
                     /locus_tag="QF359_02340"
     CDS             complement(<1..1039)
                     /locus_tag="QF359_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HJO85777.1"
                     /translation="MEFENYTERSRGFIQSAQSLAARSGHQQLSPEHILKVLLEDKEG
                     MAAGLIQAAGGNAKPAFEGVLAELKRVPEVQGSGAGQVYISTELAKVLSQAEEIAEKA
                     GDNYVTAERLLLALVLTSDTPSHKILAANGVTPQNINTAIEDMRKGRKAQSATAEDGY
                     DSLNKYAQDLTADAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIV
                     EGLALRIVNGDVPEALLSKQLMVLDLGALLAGAKFRGEFEERLKAVLTEVTEAAGEVI
                     LFIDEMHTLVGTGAAEGAMDASNLLKPALARGELHCVGATTLKEYRQNVEKDAALARR
                     FQPVFIAEPTVE"
BASE COUNT          325 a          360 c          333 g          337 t
ORIGIN      
        1 cttcaaccgt cggctcagca ataaagaccg gctgaaaacg cctggccaaa gccgcatctt
       61 tctcaacatt ttggcggtat tctttaagtg tggtggcgcc gacgcagtgc agctcgccgc
      121 gggccaaagc gggtttgagc aaattagacg catccattgc accttcagca gcaccggtgc
      181 caaccagcgt atgcatttca tcgataaaca ggatcacttc accagcggct tcggtcactt
      241 cggtgagcac ggctttgaga cgttcttcaa attcaccgcg gaacttcgcg ccggcgagta
      301 acgcgcccaa atccagcacc attaattgtt tgctgagcag cgcttccggc acatcgccat
      361 taacgatccg caaagctagg ccttcgacga tggcagtctt acccaccccc ggttctccga
      421 tcagtacagg attgtttttg gtccggcgcg acagcacttg aatggtgcgg cgaatttcct
      481 catcccggcc aatcaccgga tcgagtttgc cttcgcgggc atccgccgtc aggtcttgag
      541 cgtatttatt tagcgaatca taaccatctt cggcggtggc agactgggct ttccggcctt
      601 tgcgcatatc ctctattgcg gtgttaatat tttgtggcgt gacgccattg gctgctagaa
      661 ttttatggga gggggtatca gaggtaagaa ccaaggccag cagtaaacgc tccgccgtga
      721 catagttgtc accggctttt tcagcaattt cctctgcctg gcttaagact ttggcgagct
      781 cggttgaaat ataaacctgg ccggcacctg aaccttgaac ttctggcacc cgtttaagct
      841 cagctaaaac accttcgaag gccggtttag cattgccgcc agcggcctgg atcagaccgg
      901 ccgccatacc ttctttgtct tccaacaaaa ctttcaagat atgctccggc gatagctgct
      961 gatggccaga tcgggctgcc aaactttgcg ccgactgaat aaagccccgt gagcgctcag
     1021 tataattctc gaattccatg ctcaattacc tttctagtga cagggtataa tgctcctaaa
     1081 gcgatggccg cagtcaaccc ctcaaaggat gagtagtctt tgttttcgtt atctaatatg
     1141 ggccaaatga tgctagccgc aaggggttaa aaaggatacc aatgtttacc caaaaacaaa
     1201 atgacaatgc cagagcaaaa tttacggata ggaatacatg aatacggttg aaggcattta
     1261 ccgctatccc attaaagggc tatctggtga gaacatgaca agcgtggttc ttaacgtcgg
     1321 ggaagttatt cccggtgacc gtgaatatgc ctttg
//
LOCUS       DASCNL010000178         1946 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000399832, whole genome shotgun sequence.
ACCESSION   DASCNL010000178 DASCNL010000000
VERSION     DASCNL010000178.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1946)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000399832"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(53..1174)
                     /locus_tag="QF359_02345"
     CDS             complement(53..1174)
                     /locus_tag="QF359_02345"
                     /inference="COORDINATES: protein motif:HMM:NF012335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HJO85778.1"
                     /translation="MAKQSKNAANNKYNIPETMKAWVLGDPHEMKMIEKPVPEPGPAE
                     VLVKVGAIAVCHTDIEVLHHGMPAMVEGELPFNKDFVMGHEYMGTVVKAGPGVDEWSP
                     GDRVTVEVHAGCGRCQKCREGMYTSCHNYSYRSKGHRANGFTTDGGFAEYAINNINTL
                     VAVPDHLSDEVATLTVTAGTAMYGLDVLGGLIAGQSVVVAGAGPIGLMFIAVAKTLGA
                     APVIMSEPREDRREMAKNLGADILIDPLAENVVEKVRSLTNNKGADFTVEASGVPNVL
                     NQVIHMTNRGGRVCLAAFTNDLVPTDIAYVVSNNIYMFGIRGEGNSAVKRTASLLEQK
                     RFNPAPIHTHTFPLAEADIAMSYAENQTDGAIKVVVKMD"
     gene            1300..>1946
                     /locus_tag="QF359_02350"
     CDS             1300..>1946
                     /locus_tag="QF359_02350"
                     /inference="COORDINATES: protein motif:HMM:NF020927.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate hydrolase family protein"
                     /protein_id="HJO85779.1"
                     /translation="MAKFSKDEINGRLRDERDAGRAIYNALCGTGITAKMAAQGGADL
                     ITTHILAYFRMQGMSSMAGYLPIGDANAITMEIGERALLSVVKEAPVIAGILCPDPTR
                     DMHRFVDQLAEAGFDGVMNCPTVALIDGKFRSDLEETGMGYALEVDVLGYASSIGLFT
                     KAFCTTPNEALAMAEVGVDNIIVHYGNSSGGTIGSSTIMSEEDSIERTANVIDAL"
BASE COUNT          444 a          504 c          510 g          488 t
ORIGIN      
        1 gtcagccatt ctgttgagat aataggtgat gtcatacggg ctttttctca ctctagtcca
       61 ttttgacgac gacttttatc gcaccatcag tttgattttc ggcataactc atcgctatgt
      121 cggcttctgc cagcgggaaa gtatgggtgt gaatgggtgc cgggttaaag cgcttttgct
      181 caagcaggct ggcggtgcgt ttgaccgcgg aattgccttc gccgcgaata ccaaacatgt
      241 agatgttgtt actcacaaca taggcaatat ctgtgggcac caaatcattg gtgaaagcgg
      301 ccaagcacac ccggccgccg cgattggtca tgtggattac ctggttaagg acattgggaa
      361 cccccgaggc ctcaacagta aaatcggcac ctttgttatt ggtcaggctt ctgacttttt
      421 cgacgacatt ttccgccaat ggatcgatca gaatatcagc gcctaagttc ttggccattt
      481 cccggcggtc ttcgcggggc tccgacatga tcaccggcgc agcgcctaaa gttttggcaa
      541 cggcaataaa catcagacca atgggaccag cgccagcaac gacaacgctt tgtccggcaa
      601 tcagtccgcc cagcacatcc aagccataca tcgcggtgcc agcggtaacg gtgagggtgg
      661 caacttcatc gctcaaatga tccggcacgg ctaccagtgt attaatatta ttgatcgcat
      721 attcggcaaa tccaccatca gtggtaaagc cattggcgcg atgacccttc gagcgatagc
      781 tgtaattgtg gcaggacgta tacatgccct cccggcattt ttggcaacgc ccacagccgg
      841 catgaacctc aaccgtgacg cggtctccgg gcgaccactc atcgacaccc ggacccgctt
      901 tgacgacggt gcccatatat tcatgaccca taacgaaatc tttattgaac ggcagctcgc
      961 cttcgaccat cgccggcata ccgtgatgca gcacttcgat gtcggtatga cagaccgcaa
     1021 tggcgccgac tttgaccagc acttctgccg gacccggttc cggcaccggt ttttcgatca
     1081 tcttcatttc atgaggatca ccgagcaccc aggctttcat ggtttccggt atgttatatt
     1141 tgttgtttgc ggcattcttc gattgcttgg ccattgcctt tccccaatcg tctaatttat
     1201 tgttcttcta ttgcaattat cctatgcaag agcagaaagt aaatcacaat tacccaaata
     1261 tttggatggc ggttcgcagg atgagatagg gggagttcaa tggctaaatt ttcgaaggac
     1321 gagattaatg ggcgcctgcg cgacgaacgg gatgccggac gggcaattta taatgcgctc
     1381 tgcggcaccg gtatcactgc caagatggca gcgcagggcg gggctgattt gattaccact
     1441 catatactgg cttacttccg gatgcagggt atgagttcaa tggcgggcta tctgccgatt
     1501 ggggatgcca atgcgatcac catggaaatc ggcgagcgag ctcttttgag cgttgttaaa
     1561 gaagcaccag tgattgccgg tattttgtgt ccggacccga cccgcgatat gcaccgcttt
     1621 gtcgatcaat tggctgaagc cggatttgat ggggtgatga actgcccgac cgtggcgctg
     1681 atcgatggca agtttaggag tgacctggaa gaaaccggta tgggctatgc gttggaagta
     1741 gatgtgcttg gttatgcttc ttccatcggt ctcttcacca aagcgttttg cacgaccccc
     1801 aatgaagccc tagccatggc ggaagtcggc gttgataata tcatcgtgca ttatggtaat
     1861 tcgtccggcg gcaccatcgg ttcctcgacc atcatgagcg aagaagactc aatcgagcgc
     1921 acggccaatg tcatcgatgc gctgca
//
LOCUS       DASCNL010000179         1019 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000402558, whole genome shotgun sequence.
ACCESSION   DASCNL010000179 DASCNL010000000
VERSION     DASCNL010000179.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000402558"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="QF359_02355"
     CDS             complement(<1..566)
                     /locus_tag="QF359_02355"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO85780.1"
                     /translation="MAGRVEGKVALITGAGSGLGRASAIHLAEEGASIIASDLNEITA
                     VETAATINAKWQGAAISAKHDATNEDDWKAVLELAQVQFGGLHVLLNNAGISIGGDIE
                     STEFAEWKKLQEIDVDSVFWGCKLALPYMRDSGGGSIINISSTVGILGNPSTLGYGTA
                     KAAVRSMTKSIALHCARHKYNIRCNSVHP"
     gene            complement(568..>1019)
                     /locus_tag="QF359_02360"
     CDS             complement(568..>1019)
                     /locus_tag="QF359_02360"
                     /inference="COORDINATES: protein motif:HMM:NF012472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HJO85781.1"
                     /translation="WSRDVEAEILPTCQELGISLMPYAPLGRGFLSGTIKSVDDLIEG
                     DRRSAHPRFAAENIEENNKKVAVIEQIAKTRGFKPAQVAIAWVLAQDEMIVPIPGTKH
                     RKYLDENVRAIDIVLDEDQIKQLSDAFPAGETAGDRYPAGQMKRLGL"
BASE COUNT          246 a          279 c          237 g          257 t
ORIGIN      
        1 ggatgaaccg aattgcagcg gatattgtat ttatgacggg cacaatgaag cgcgatggat
       61 ttggtcattg agcgaactgc agctttcgcc gtaccataac cgagcgttga tggatttccc
      121 aatatcccaa ctgtcgaaga aatattgatg attgagccgc caccactatc ccgcatatag
      181 ggcagcgcga gcttgcagcc ccaaaaaaca ctgtcgacat caatctcctg cagttttttc
      241 cactcggcaa attcggtgga ttcgatatca ccaccgatac tgataccggc gttattgagc
      301 aacacatgca gcccgccaaa ttgtacttgc gccagttcga gaacggcttt ccaatcatct
      361 tcattagtcg catcatgttt ggctgaaatc gccgcacctt gccatttggc attaatggta
      421 gcggcagttt caacggcggt tatttcgttg agatcagagg ctataatgga agcgccttct
      481 tccgccaaat gaatggccga ggcacggcct aatcctgagc cagcccccgt tatcagcgca
      541 acttttccct caacgcgccc tgccatgtca gagacccagc cgtttcattt gaccagcggg
      601 atagcgatca ccggcagttt caccagccgg gaaagcatca ctcaattgct tgatttgatc
      661 ttcatccaga acgatgtcga tggcccgcac attttcatcc aagtatttgc gatgcttggt
      721 gcccgggatc ggcacaatca tttcgtcctg cgctaatacc caggcgatag cgacttgcgc
      781 cggtttaaag ccacgcgtct tggcaatttg ttcaatcact gcaacttttt tattattctc
      841 ttcgatattc tcggcggcaa agcgcggatg tgcactgcgc cgatcgcctt caatcaaatc
      901 atcaacggac ttaatggtgc cgcttagaaa accacggccg agtggcgcat atggcatcaa
      961 gctaatgccg agttcttggc aggtcggcag aatttcagct tcgacatcac gcgaccata
//
LOCUS       DASCNL010000180         1894 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000405434, whole genome shotgun sequence.
ACCESSION   DASCNL010000180 DASCNL010000000
VERSION     DASCNL010000180.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000405434"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            321..1151
                     /gene="nirC"
                     /locus_tag="QF359_02365"
     CDS             321..1151
                     /gene="nirC"
                     /locus_tag="QF359_02365"
                     /inference="COORDINATES: protein motif:HMM:NF008595.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HJO85782.1"
                     /translation="MTLIDSINLFSKLSVAKTEFLDRNPLGFWVTSMMAGAYVGMGIL
                     LIFSVGQNADPSSRNLVMGVSFGIALTLVVFAGSELFTGHTMYMSIGRLTGKISTLEM
                     FRAWGVTWAGNLAGSALLGALFVVGGGGVVLQDGGQDLIHVVATKKMSAPGIELFIRA
                     ILCNWLVCLAIWGAARTKNDMAKCMIIFWCLFAFIATGFEHSIANMTLFSVALFSEHP
                     ETVSLAGAARNLVWVTLGNTFSGAIFMGLGYWLAAGRPKTKEQADIQQESALADDFDE
                     "
     gene            complement(1343..>1894)
                     /locus_tag="QF359_02370"
     CDS             complement(1343..>1894)
                     /locus_tag="QF359_02370"
                     /inference="COORDINATES: protein motif:HMM:NF017652.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HJO85783.1"
                     /translation="AKPEMASLDMGICCITHSYGEQIIEWTRSFLKKTAKMMLDAGIK
                     PELEIYNNSNMEDVYLLIQEGLLTKPYYHTFVMGMNKINQAGTRYTPQHLQHYIDLLP
                     EDSRFNAMGIGPSQLPATTHALIAGGGARVGFEDNIYFRKGELAKNNAQLVERTANFV
                     HDLGLEVASPAEARDILGIPQLS"
BASE COUNT          419 a          449 c          514 g          512 t
ORIGIN      
        1 atgggtggtt aatatggact gttgcgatcg ctttagctct tgttcttgcg ttaagaccac
       61 agccatacaa aagagcggcg gatgctcatt ccaaggtcga aacgttgctt acataggcat
      121 tccggtctaa ataaccataa ctccaccggg gggggggcga aggtcaaaga ttagagtatc
      181 cgcgtgggca agctactggc catctgtttc gcttttctaa ttacggcaat tgggttgggc
      241 accgcctggt ctattccact ctttgcaccg tcaccgcaag aaagacattt tttgaaattc
      301 tccataaaga gggctacctt atgaccctaa ttgactcaat aaacctattc agcaaacttt
      361 ccgtcgcgaa aactgaattc ctggatagaa atccgcttgg attctgggtc acatctatga
      421 tggccggggc ttatgtcggc atgggaatcc tgttgatttt ctcggtcgga cagaatgccg
      481 atccgtcatc gcgtaacttg gtgatgggcg tcagttttgg cattgctcta acacttgtgg
      541 tgtttgccgg atcggagttg tttactggtc acaccatgta catgagcatt ggccgactga
      601 ccggtaaaat cagtactctg gaaatgtttc gtgcctgggg tgtgacctgg gccggaaatt
      661 tggctggctc agcactgctt ggcgcgttat tcgtcgttgg cggtggcggt gttgtccttc
      721 aggatggagg ccaggattta atccacgtag tggcaaccaa gaagatgtcg gctcccggca
      781 tcgaactttt catccgggcc atactttgta attggttggt gtgtctggcg atctggggcg
      841 ctgcacggac caaaaacgac atggcaaaat gcatgatcat cttctggtgc ttgtttgctt
      901 tcatagcgac tgggttcgaa cattcgatcg ccaatatgac gctgttttca gtcgccttgt
      961 tttccgaaca tcccgaaacc gtttcccttg ccggtgcagc gcgtaatctt gtctgggtaa
     1021 ctctggggaa tacgttttcc ggcgctattt ttatgggact tggttattgg ttagcggcag
     1081 gccgtccaaa aacgaaagag caggccgata tccaacaaga aagtgctttg gcagacgatt
     1141 ttgacgagtg atcatctagc agttcgccaa acaattcatc gacccaggtc ttaattgtaa
     1201 agttatactc acacatctgc aacgctgcct tttggaaaaa ggcttaagtt cggcgcgaga
     1261 gacataatat ccgctataat atcctaccca agcctttcag tcttcaggaa ctggccggca
     1321 aggtcaaaga ggtgattgcc gcctaactca actgcggtat tcccaaaata tccctcgcct
     1381 ctgccgggga ggcgacttcc agaccgaggt cgtggacgaa attagccgtc cgttcaacca
     1441 attgagcgtt gtttttggcc agttcacctt tgcggaaata gatgttgtcc tcgaagccga
     1501 cccgggcgcc gccaccggcg atgagggcat gggtggttgc cggtaattgg ctgggcccaa
     1561 tgcccatggc gttgaagcgc gaatcctcgg gcagcagatc aatgtaatgc tgtaaatgct
     1621 ggggcgtata gcgggtacct gcctggttga ttttgttcat gcccatgacg aaagtgtggt
     1681 agtagggctt ggtcagcagg ccctcctgga tcagcaggta aacgtcttcc atgttggagt
     1741 tattgtagat ttcaagctcc ggcttgatgc cggcgtcgag catcatcttg gcggttttct
     1801 tgagaaacga acgggtccat tcgatgatct gttcgccgta gctatgggta atacagcaga
     1861 tgcccatgtc gagcgaggcc atttccggtt tggc
//
LOCUS       DASCNL010000181         1833 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000406841, whole genome shotgun sequence.
ACCESSION   DASCNL010000181 DASCNL010000000
VERSION     DASCNL010000181.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000406841"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="QF359_02375"
     CDS             complement(<1..281)
                     /locus_tag="QF359_02375"
                     /inference="COORDINATES: protein motif:HMM:NF024805.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJO85784.1"
                     /translation="MNAKVPPSMDIEEENTNGFSIGDLLRTSRNRRDEELCEVSEALR
                     IRRVYLEALENNKLEELPGAIYAIGFIRTYAEYLGLDAEEFVRHYKSEET"
     gene            665..1498
                     /locus_tag="QF359_02380"
     CDS             665..1498
                     /locus_tag="QF359_02380"
                     /inference="COORDINATES: protein motif:HMM:NF019498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO85785.1"
                     /translation="MSLIHPLIDVKEFVENNSCRSRFITPISGDQGSSTTAFCSVSMP
                     HDLPHRHLHTSCDEISILIRGEGVYGLGDQRISARVGDCRVVPKGAEHFFVNESGEPS
                     LMVGFFVGAEDVAATGIAYGDLVTKDDLATLRGEQDGGILINLGDVQPENMDQGDGWL
                     ITDFRLPISTRNGCSSTLFRARFMPGAVHKKHRHENCDEIYYIISGRGLAGAGSDRVE
                     VRGGHFHFIHKGVEHWLHNLSDTEPIEVVGLYCGAGSVADTGYVYMGDVTPDDLKART
                     G"
BASE COUNT          492 a          395 c          420 g          526 t
ORIGIN      
        1 gtttcttcgg atttataatg gcggacaaat tcttcagcat ccaaaccaag atattcggca
       61 taggtgcgaa tgaaaccaat tgcgtaaata gcgcccggaa gttcttctaa tttattgttt
      121 tctaaggctt ccagataaac tcgacgaatt cgtaaagctt cggatacctc acacaattcc
      181 tcatcgcggc gattgcgcga cgtgcgcaaa agatcaccaa tgctgaaacc attggtgttt
      241 tcttcttcaa tatccatcga tggtggtact tttgcgttca tttgatctct tcttctagtg
      301 attaaaccct gtgtttccgg aatcaccatc gcatccgata aaatcattcc ctccaaaaaa
      361 caattttaac aggacgaaga gaaattagct ccagaagtta aatatttaca ctagaatcgt
      421 aaaattacat ttaaattagt tttctcccaa caaactttta aaattgaata gattgaatgg
      481 gaaagcgaca gatgctaaat caagctacga tgatactgcg tcttaatgta tcgaatcaat
      541 gaaaaattgg gaggtgctgg taattatgga taaagtgtct ttatcgtcac aggttcgcaa
      601 gttagtttaa cttacttagc ggtttggcta gatttattga gaaatgttca gaaaagattg
      661 agccatgtcc cttatccatc cgttaatcga cgttaaagaa ttcgtcgaaa acaattcatg
      721 caggtcgcga tttataacgc cgatatccgg tgatcaaggc agttcgacaa ctgctttttg
      781 ttctgtctcc atgccgcatg atttgccgca ccggcactta cacacttctt gtgatgaaat
      841 ttcaatcctg atcagaggag agggtgttta cgggttgggt gatcaacgca tatcggcgcg
      901 ggtgggtgat tgccgtgtcg tgcccaaggg agctgagcat ttttttgtta atgagtcagg
      961 tgagccatca ctgatggttg gattttttgt cggagccgaa gatgtcgccg ccaccggtat
     1021 cgcctatggc gatcttgtca cgaaggatga ccttgccact ctgcgcggcg aacaggatgg
     1081 cggcattcta attaatctcg gagatgttca accggaaaat atggaccaag gcgatggctg
     1141 gctaatcact gattttcgtt tgccgatttc cacccgcaat ggctgttctt caaccttgtt
     1201 ccgggcgcgg tttatgccgg gtgcggttca caagaagcat cgtcatgaaa actgtgacga
     1261 aatttattat attatcagcg gtcgcggctt ggccggtgcc ggatccgacc gcgtcgaagt
     1321 gcgcggtggc cactttcatt tcattcataa aggcgttgaa cattggctcc acaatctcag
     1381 cgataccgag ccgattgaag tggtcggact ctattgtggg gccggtagtg tcgctgatac
     1441 cggttatgtc tatatgggtg atgtcacgcc ggatgacctc aaagcaagaa cagggtaata
     1501 aataatcact aactgatttg tatattagct gtccgccgtt ttagtaattt ttctgataat
     1561 ttgggccccc gccccggttc cgaccaggga cagacctcaa tgcatataga acacccgata
     1621 tagtctgaaa aatagaaaat acatttatca aaatcgacat accatttttc cacgccgcga
     1681 accatttgtt tggtatcaaa aatggcgccg tgcgggcgtt cggtgacgta ttttttacac
     1741 gctgtccgaa aaccctaagc aactcaagga aaacattaac tttgaggatt ataaggagtt
     1801 acgcaatatg atgggcgagt gcctgtcatt tct
//
LOCUS       DASCNL010000182         2674 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000407564, whole genome shotgun sequence.
ACCESSION   DASCNL010000182 DASCNL010000000
VERSION     DASCNL010000182.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000407564"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..910
                     /locus_tag="QF359_02385"
     CDS             <1..910
                     /locus_tag="QF359_02385"
                     /inference="COORDINATES: protein motif:HMM:NF013491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HJO85786.1"
                     /translation="GKATSLGILTRLGVRVPPGFCILDDAFLHLLEANSLNDQIAAII
                     PELDFDDYENIDKNTGQIRSLIKESIIPGDLEKDIGDQYADLVDDVNRFVAVRSSVSV
                     RNSDVSSFPGMMDTYHYILGIEDVLLKVRKCWASLWTTRAAFARHQQNVEQNSGVIAP
                     VVQLMVKSEIAGVLFTANPINKHTGDIVIESNWGLGESVVSGKSMNDFYILDKDSLDI
                     KQEQISPKTVMVTMDEAKGSDRIEIPVPEELASVPTLSENHLKALGEAGKRIEDHFGF
                     NVDVEWAFQEDTLYILQARKIRGLEE"
     gene            952..1998
                     /locus_tag="QF359_02390"
     CDS             952..1998
                     /locus_tag="QF359_02390"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO85787.1"
                     /translation="MTYRSVDVHNHFYPKEYLEYLVSRTGERIRAEQTGDESYVCICG
                     DVRVAHIDRPGHYDVEARIRDLDAAGMDTQIMSKTIPAPELLPRDEGVYWAKKINDAL
                     AEAVAKYPGRLYAYATLPYQDVDAAIVELERCKKELNFNGIQMFSNMQGEVMYQEKFD
                     PIFQMAGDYDLPILLHPTIPMTSEAMDKSKIPYQLYGYTLDSTLCVISLIFNGTFERN
                     TKFKLIHAHLGGIAPYMVRRLKDSWKGYAHEWGLEREQLPEETYRERVWADTTSFYLP
                     AMKCCLEWLGPEHMMLGTDYAHRVGDPEGAIKSLVDLGEELELPQDQVDMMLGKNAEE
                     LFNLPPLSSYPANK"
     gene            2152..>2674
                     /locus_tag="QF359_02395"
     CDS             2152..>2674
                     /locus_tag="QF359_02395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85788.1"
                     /translation="MDRSISALRTLRPDQDGDIFWFRDDLHQPYPISPMGMSTVQKHH
                     CWGYHVASEQTQLPPSKGAHVKIHQGRVYLGFALIEDEAEVCQRAESFGKLVEQCIDS
                     WDEYYNGYIDEIIANIKALNLDNSENLSIADLLDHVQKAEQMNRRAWEIHFILMYHAD
                     ALYLEFEAYCLEMV"
BASE COUNT          724 a          630 c          654 g          666 t
ORIGIN      
        1 cggaaaagcc accagtctgg gtattttaac cagactgggc gtgcgtgttc cacccgggtt
       61 ttgcattctc gatgacgcct ttcttcattt gttggaagcc aattctctta acgatcaaat
      121 cgccgctatc atcccagaac tggatttcga cgattatgag aatatcgaca aaaacaccgg
      181 acaaattcgt tcgctgatta aagagtcgat aatccccggt gatttggaaa aagacatagg
      241 tgatcaatac gccgatctgg ttgatgacgt caatcgattt gtcgccgtgc gttcttcagt
      301 atcggtcaga aattccgatg tctcctcctt ccccggcatg atggacacat atcattatat
      361 tctgggaatt gaagatgtcc ttttaaaagt gcgcaagtgc tgggcctctc tctggacaac
      421 ccgggcggcc ttcgcccgtc atcaacagaa tgtggagcag aacagcggcg ttatcgcgcc
      481 tgtagttcag cttatggtga aatcggaaat cgccggtgtg ttattcactg ctaacccgat
      541 caacaaacat accggcgata ttgtcatcga atccaattgg ggattgggtg aatcggtcgt
      601 atccggcaaa tcaatgaatg acttctatat tctcgacaag gattccttag atataaaaca
      661 agagcagatt tcccctaaga cggtgatggt aactatggat gaagccaaag gttcggaccg
      721 gattgaaatt ccggtgccgg aggaattggc atctgttcca acgctgtcgg aaaaccatct
      781 caaagcgctc ggcgaagccg gtaaacgcat tgaggatcat ttcgggttca acgtagacgt
      841 cgaatgggcc tttcaggagg acacacttta catcctgcaa gctcgcaaaa ttcgaggtct
      901 ggaagaatga actcgataaa caaccctgtc atcaactaaa ggaaagatga aatgacatat
      961 agatcagttg acgtacataa tcacttttat cccaaggagt atctggagta tctggtaagc
     1021 cggacgggtg agagaatccg tgccgagcag accggtgatg aaagttatgt ctgcatctgc
     1081 ggcgatgtcc gcgttgccca tatcgaccga cccggccatt acgatgttga agctcgcatc
     1141 agggatctgg acgccgccgg tatggacact caaattatga gtaaaaccat tccggctcct
     1201 gaactcctgc ctcgggacga aggcgtttat tgggccaaga aaatcaatga cgcattggcc
     1261 gaagccgtcg caaaatatcc aggccgactt tatgcttacg cgaccctgcc ttatcaggat
     1321 gtcgacgcgg cgatcgtgga gcttgaacgg tgcaagaagg agctgaactt taacggtatc
     1381 cagatgttct ccaacatgca aggcgaagtc atgtatcagg agaaatttga tccgatcttc
     1441 caaatggcgg gcgactacga ccttcccatc cttctccacc cgaccatacc catgacctcc
     1501 gaagcaatgg ataagagtaa gattccgtat cagctttatg gctatacctt ggattcgacc
     1561 ctctgcgtca tcagcttaat tttcaacggc actttcgagc gtaatacaaa gttcaaattg
     1621 atccacgctc atcttggcgg catcgctcct tatatggttc gccgtcttaa agattcctgg
     1681 aagggttacg cccatgaatg gggtttggag cgggaacaac ttcctgaaga aacttatcgc
     1741 gaacgggtct gggcggacac gacatcattc tacctgccgg ccatgaaatg ctgcttggaa
     1801 tggctcggcc cggaacatat gatgctcggc accgactatg ctcaccgagt gggcgatccc
     1861 gaaggcgcta tcaagagtct cgtcgattta ggcgaagagc tagagttacc gcaggatcag
     1921 gttgatatga tgcttggtaa aaatgccgaa gaattgttca acttacctcc actgtccagt
     1981 tatccagcga ataagtgata attcgacagg cataaattgc tttggttgcc ggtcatatga
     2041 ccggcaacct gtggcatttg aaaagttctc tataagagct taaaaaaaat ttgtatcggt
     2101 gataaaagga aaatagatca gaaaataatt agcgaatggg aggcagagaa aatggatcgt
     2161 agcatttccg cccttaggac tttaaggcct gaccaagatg gcgatatatt ttggttcaga
     2221 gacgatttgc atcaacccta ccctatttca ccgatgggta tgagcactgt gcaaaagcac
     2281 cattgctggg gctatcacgt tgcttccgag cagactcaat tgccgccgtc gaaaggcgct
     2341 catgttaaaa ttcaccaagg ccgcgtttat cttgggttcg cgctgatcga agacgaggct
     2401 gaggtttgcc agcgcgcaga atccttcggt aaattggttg aacaatgcat cgacagctgg
     2461 gacgaatatt acaacggcta tatcgatgaa atcatcgcca acatcaaagc gcttaatctg
     2521 gacaactccg aaaatctctc catcgccgat ttacttgatc atgtgcaaaa ggccgagcaa
     2581 atgaaccgcc gagcttggga aattcatttt atcctgatgt atcacgctga tgcgttgtat
     2641 cttgaatttg aggcttactg cctggaaatg gtgc
//
LOCUS       DASCNL010000183         4829 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000409626, whole genome shotgun sequence.
ACCESSION   DASCNL010000183 DASCNL010000000
VERSION     DASCNL010000183.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4829)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4829)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4829
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000409626"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="QF359_02400"
     CDS             complement(<1..315)
                     /locus_tag="QF359_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85789.1"
                     /translation="MTVVILLSQMSEAFAHHILGRPSYQLNEDSNTPPSLQGEAEMGE
                     YYVTYMIYPAFPKPEEPGRISVYIKRLDNSKSFDGVVKFTAHQDDEFLFFSTSGKTEN
                     LGT"
     gene            complement(351..1004)
                     /locus_tag="QF359_02405"
     CDS             complement(351..1004)
                     /locus_tag="QF359_02405"
                     /inference="COORDINATES: protein motif:HMM:NF024247.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO85790.1"
                     /translation="MKRRHLLRLLTYGATLLGFSALPYGVSRLLAPAENKPSDRAIKL
                     FTRRQDRREYLRPPGALKNDVDFIAACIGCVLCGEVCPPRCIKFHVRDGGGKVNTPYI
                     NPSQTGCILCNKCMEVCPTEALTVTKRQNINMGIARIDQTACYPWVDKGICGACVSIC
                     PLGKSAIAYKHWNQYQPIVKDGCVGCGLCVEVCPHPSLPIWIADRKAYSPAEKKKLL"
     gene            complement(1001..2008)
                     /locus_tag="QF359_02410"
     CDS             complement(1001..2008)
                     /locus_tag="QF359_02410"
                     /inference="COORDINATES: protein motif:HMM:NF024211.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HJO85791.1"
                     /translation="MEDASRPFYLWRHLNKVRWVILSLVFALLIVIPVLHLYQTYVAA
                     HAYDLLAPSEKRLYDIVEFATSPFISDPANDLDAIKGNTWSGHFWGLQVSDPLAVVSQ
                     IAAGLSLYWPFILTALIPLVLTIILGRFFCSWLCPATLIYELNSNLAAWLKWAGLKLP
                     SFQFDRRFKYGVLAIGLVLSSLAGSVLIATIYPPAIIGRELYFVIASGGFGVGIIIFI
                     VTLLFDLLVARRGFCRYLCPGGALYSLLGRYRLVRIRRIVENCNDCAKCNVVCEFGLD
                     PLRDDFGQECTNCAACMAICPTEAMTFILRLSDYPAQGPGHLGKQYQPEGEVDLGAAA
                     E"
     gene            complement(2014..2559)
                     /locus_tag="QF359_02415"
     CDS             complement(2014..2559)
                     /locus_tag="QF359_02415"
                     /inference="COORDINATES: protein motif:HMM:NF024247.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO85792.1"
                     /translation="MTPAAARAVRNKPSLRFLRPPGAHGEAKFLSKCINCGQCGEICP
                     NRCIKFFNFENGLKSTGTPYITPREKACILCMKCGEVCPTGAIPKIKRKANEVMAKVK
                     MGHAVVDKELCLSYQGKTCGVCYRACPLQDVAIKVGMLEQPHVKDACVGCGLCERSCI
                     QMPQAIRIRPNRGTSHNSSEG"
     gene            complement(2683..>4829)
                     /locus_tag="QF359_02420"
     CDS             complement(2683..>4829)
                     /locus_tag="QF359_02420"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85793.1"
                     /translation="LENLFMKGVLGSNTIEANARMCMTSAVTGYFATLGSDTPPLAYD
                     DIELSDMIMHFGHNARESHPIIFWRAADHKKKKDIPTIVVDPRRTGTVMGYEDINPNN
                     SVHIPILNGDISFLNAIAHVLLKDHKDVIDWDFIKAHATGWKEYTEGVLKNYSPEQVQ
                     DRMGGVNHEVSPRIIREVAAMFADATRKRLARAKGTQKGGYGGVIIMWGIGYNQHLHG
                     QHNVISIINLLTLTGNLAKPGCGPFSMTGQPNAMGERFTGGLTDRLPFNQPLKNAKHR
                     KQMAKYWRVPEKNLINAMNSKNPGYAVGMMERALKGDVKAFFFVYATHIDLPDQYNLV
                     RPAISKTFNVVQEIYRHAPNNLYADVIFPAATWGEVEGVYISSERRINICQKAAEPPK
                     GCRPDMDMVIDKAKSIGELLGLDMDKILPYQRKKDGFYDAEEIFRDVIRASTGTDTDL
                     TGILEVEKLDKISPYEQLIELRGIQWPAPTYEIAQNGGSKRRYMLQEGQWENKPYGYF
                     RTKDGKVHMKMIEQDYTNREKITKELMRFGPEKDLHTIDHLDLINTARDQALTPDIPD
                     EEHRGKAWNKVPKDKYPYWFGLGVVYEHFHTAKSNRSPTTRRLVPVMYVEMHPDDAKD
                     LGVKDGEKVRVVTRRGSLEARAQVGSNSLVKPSRNSVPRGYMFGPWNLSVADSADPKK
                     NKWLGNGVTSRVWDPVSGQVDFKKSAARIEKI"
BASE COUNT         1166 a         1217 c         1231 g         1215 t
ORIGIN      
        1 agtacccaaa ttttcagttt ttccgctggt gctgaaaaac aaaaattcat catcctggtg
       61 ggcggtaaat ttcactacgc catcaaatga cttactgttg tcgaggcgtt taatgtagac
      121 gctgatgcgg ccaggctcct ccggttttgg aaaagcgggg tagatcatat aggtaacata
      181 atactcaccc atttccgctt caccctgcag gctcggcggc gtgttggaat cttcgttgag
      241 ctgataagac ggtcggccaa gaatgtgatg agcaaaggct tcactcattt gcgaaagcag
      301 gattacaacc gtcaaagcta tcaagaatat cctcgaagag cgcatgctaa tcataatagt
      361 ttctttttct ctgctgggga ataagctttt cgatcggcaa tccatattgg caggcttgga
      421 tgagggcaaa cctcaacgca taaaccgcag ccgacacagc cgtctttgac tatgggctgg
      481 tattgattcc aatgcttata tgctatcgcc gattttccca gtggacaaat gctgacgcag
      541 gcgccgcaga tacctttatc gacccaagga taacaagcgg tctggtcgat ccgtgcaatt
      601 cccatattga tgttttggcg tttggtgacg gtgagtgcct cggtcgggca aacttccatg
      661 catttattgc agagtatgca accggtttgt gaaggattaa tgtagggcgt attgactttg
      721 ccgccgccgt cgcgcacatg gaacttgatg cagcggggtg ggcatacttc accacataag
      781 acgcagccaa tgcaggcggc gatgaaatct acatcatttt ttagcgcacc gggcgggcgc
      841 agatattcac gccggtcttg acgccgagtg aataatttta tggcgcggtc cgagggttta
      901 ttttcagctg gagcaagcag acgggagacg ccatagggca gggcgctaaa tcccagcagg
      961 gtcgcgccat atgtcaggag gcgtaataag tgacgccgtt tcattccgct gctgccccta
     1021 aatctacctc tccctcaggt tggtattgtt tgccaaggtg gcccggacct tgggccggat
     1081 aatcggaaag acgcagtatg aaagtcatgg cctcggtggg gcaaatcgcc atacaggcag
     1141 cgcaattggt gcattcctga ccaaaatcat cccgcagcgg atcaagcccg aactcacaga
     1201 ccacattgca tttagcacaa tcgttacagt tttcaacaat gcggcggata cgcaccagac
     1261 ggtagcggcc gagcaatgaa taaagtgcgc cgccggggca gagatagcgg cagaacccac
     1321 gccgggccac taatagatca aataacaatg taacgataaa tatgataatg ccgacaccga
     1381 agccacctga agcaatcaca aaatacagtt cgcggccgat gatggccggt ggataaatcg
     1441 tggctataag cactgagccg gccagggaag ataaaacaag accaatcgcc agaactccat
     1501 atttgaaacg ccggtcaaac tggaagctgg gcaactttaa cccggcccat tttaaccacg
     1561 ctgccagatt ggaatttagc tcatagatca aggttgccgg acacagccaa ctgcagaaaa
     1621 aacggcccaa tataatcgtc aaaacgagcg gtatgagcgc ggttagaata aatggccaat
     1681 agagcgacag gccagcagct atttggctga caaccgccag tgggtctgat acttgcagtc
     1741 cccaaaaatg acctgaccag gtattacctt tgatcgcatc gaggtcattg gcgggatcgc
     1801 tgataaaggg cgaggtggca aactcaacaa tatcatagag ccgcttttct gaaggggcta
     1861 aaagatcata agcgtgagca gcgacatagg tttgatagag atgaagcacc ggaattacga
     1921 tgagcagggc gaagaccaaa cttaagataa cccatctgac tttattgaga tgacgccata
     1981 aatagaaagg tcgcgaagcg tcttccattg ggtttatccc tcagaactat tatgggatgt
     2041 tccgcgattg ggccgaatgc ggatggcttg cggcatttgg atgcaggagc gttcgcacaa
     2101 cccgcaaccg acacaagcat ctttaacatg gggttgttcc agcatgccga ccttaatagc
     2161 gacatcctga agcgggcagg cacggtaaca gacgccgcag gtcttgcctt gataggacaa
     2221 gcacagctct ttatcgacca cggcgtgccc catcttgact tttgccatga cctcattggc
     2281 tttgcgctta attttcggga ttgcgccggt cgggcagact tcaccgcatt tcatacataa
     2341 aatacaggct ttctcccggg gtgtaatata aggcgtaccg gttgatttta agccattttc
     2401 aaaattgaaa aatttgatgc accgattggg gcaaatctcg ccgcattgcc cacaattgat
     2461 gcatttgctt agaaatttag cttcgccatg agcgcccggt ggccgcagaa aacgcaacga
     2521 tggtttattg cgcacagcgc gggcggcagc aggcgtcatt gttgccactg tgcccgctcc
     2581 aataactttt aaaaattctc ttcgatccat tgcacctacc agttttgtat caggtgggtt
     2641 cggttcctca atcgaaccca cctgaaactg ttaagtcatt gatcaaattt tctctattcg
     2701 ggccgcgctt ttcttaaaat caacttgtcc agaaaccgga tcccagacac ggctggtcac
     2761 accattgccc agccatttat tctttttagg atcggcgctg tcggcaaccg aaagattcca
     2821 tgggccgaac atatagccgc gcggcaccga gttccgggac ggtttaacca gcgaattact
     2881 gcccacctgg gcgcgcgcct ccaaggaacc ccgccgggta acgacacgca ctttttcgcc
     2941 gtccttgaca ccaagatcct tggcatcatc cgggtgcatc tcgacataca tcactggtac
     3001 cagccgccgt gttgtcggac tgcggttgga tttggcggtg tggaaatgtt catagaccac
     3061 accaagaccg aaccaatagg gatacttatc ctttggcact ttgttccagg ctttgccgcg
     3121 gtgttcttca tcaggtatat ccggcgtcaa cgcctgatcg cgggcggtat tgatcaagtc
     3181 cagatgatca atggtgtgaa ggtctttttc aggcccgaac cgcatcagtt ccttggttat
     3241 tttttcgcgg tttgtgtagt cctgttcgat cattttcatg tggactttgc cgtctttggt
     3301 gcggaaatag ccatatggtt tgttctccca ttgaccttct tgcaacatgt aacgtcgttt
     3361 ggagccgccg ttttgagcga tttcgtaggt tggcgccggc cactggatac cccgcaactc
     3421 aatcaattgc tcataggggg aaattttgtc cagcttttcg acttcaagga ttccagtcag
     3481 gtccgtatcg gtgcctgtgg aagctcggat aacatcccgg aaaatctcct cagcgtcgta
     3541 aaagccgtct tttttcctct gatatggcag tattttatcc atatccagac cgagtaattc
     3601 gccgatgctt ttggctttat cgataaccat atccatatcc ggacggcagc ctttcggcgg
     3661 ttcggccgct ttctggcaga tgttgatacg tcgctcagaa gaaatatata caccctctac
     3721 ctcgccccag gtcgccgccg ggaatatcac gtcggcgtaa agattgttgg gggcgtggcg
     3781 gtagatttcc tgaaccacat tgaaggtttt tgaaatcgcc ggacgcacaa gattatactg
     3841 atccggcaaa tcgatatgcg ttgcataaac aaaaaagaat gccttcacat ctccttttaa
     3901 ggcccgctcc atcatgccaa ccgcgtaacc cgggttcttg ctattcatcg cattgatcaa
     3961 gtttttctcg gggacccgcc agtattttgc catttgcttg cggtgtttgg cattttttaa
     4021 cggctgattg aatggcaacc ggtccgtcag gccgccggta aaacgctcac ccatggcgtt
     4081 gggttgtccg gtcatcgaga aaggaccgca gccaggcttg gctaggttac cggtcaaagt
     4141 cagtagattg ataatcgaga taacattatg ctggccgtgg agatgctggt tgtaaccgat
     4201 gccccacatg atgatgacgc caccgtagcc acctttctgc gtacccttgg ctcgggccag
     4261 cctcttgcgg gtggcgtcgg cgaacatcgc ggcgacctca cgaattattc ttggtgacac
     4321 ttcatggtta accccgccca tgcggtcctg cacttgttcg gggctgtaat ttttaagcac
     4381 cccttcggtg tattctttcc aacctgtggc atgagccttg atgaaatccc agtcgattac
     4441 atccttgtgg tctttcagga gtacgtgagc gatggcgttt agaaaactga tgtcgccgtt
     4501 caagatcggg atatggacgg agttatttgg attgatgtct tcatatccca tcaccgtgcc
     4561 ggtccggcgt ggatcgacaa cgattgtggg gatatctttt ttctttttat gatcggccgc
     4621 gcgccaaaag atgatcggat gcgactcgcg tgcattgtgg ccgaaatgca tgatcatatc
     4681 actgagctct atatcatcgt aggctagcgg tggtgtatcc gatccgagcg tggcaaaata
     4741 accggtgacg gcggaggtca tgcacatccg ggcattggct tcgatggtgt tagagcccag
     4801 cacacccttc ataaacaggt tttctagat
//
LOCUS       DASCNL010000184         2063 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000410264, whole genome shotgun sequence.
ACCESSION   DASCNL010000184 DASCNL010000000
VERSION     DASCNL010000184.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000410264"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            281..1384
                     /gene="ybgF"
                     /locus_tag="QF359_02425"
     CDS             281..1384
                     /gene="ybgF"
                     /locus_tag="QF359_02425"
                     /inference="COORDINATES: protein motif:HMM:TIGR02795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HJO85794.1"
                     /translation="MKNYFPIGRIVTTVILTAGFIAGVLDVQAQDKSLGGLISKLNRL
                     ERDIQTLNRQVYKGGTPPKPVSSAPKLVISQPAAIPASSKAYIIRLEERLSQLEGELQ
                     NTTNAIESMNHNVDQMKIRLDKLVVDIDFRLTRLESGAPRSGLPGQPGAAGQLQRPFG
                     PPTVSAVPRAPGVQQIGPTTGGPVVTSGKPGTLGKINETDLSSVQRDARNLHLGQAPQ
                     ATQSATAAPPPAAVKKSVLPAGTPSSQYKFAFSILRKADYDNAKLALQEFIEKHPQDK
                     LTPNARYWLGKTYYVRANYRDAAEAFLRGFQQAPKGPKAPDTLLMLGKSLANLKKQSD
                     ACATFSKLTQDYPDASANIKKQLKRESGRTGCK"
     gene            1362..>2063
                     /gene="tilS"
                     /locus_tag="QF359_02430"
     CDS             1362..>2063
                     /gene="tilS"
                     /locus_tag="QF359_02430"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HJO85795.1"
                     /translation="MDARVVNKSPSSDAISTREFAGFFAPFSDLISKNAPFAVAVSGG
                     ADSMALCLLADLWAKMRGCQVTALTVDHGLRAEAAAEAKTVASWLSTRDIEHHILSWQ
                     GVKPASGIQAAAREARYALMMDWCQENNVNVLMTAHHLEDQVETFLLRAERGSGLDGL
                     ACMAAETKMSGIILLRPLLSVSKNRLRGTLIALNQDWLEDPSNQNPAYRRSKMRKLVA
                     AMEQSGQDANRISALI"
BASE COUNT          525 a          514 c          536 g          488 t
ORIGIN      
        1 ctctcggcca tgatgaatca tcctggtcac agaaccgtcg cggcgtaacc actgtatcgg
       61 gcgctggcag ctaactaata ctgatcgaag cgtttaaaga cgcctgccat cccagcttat
      121 tctgggcggc gggcgtcttg ccgtttaggt gtgcatatcc gatgatttaa atcttgccat
      181 tatttagcca atttttctgg tcaaactgcg ctataatcaa ctattagaag ttattgccat
      241 tcatgaataa gcggacatca actgaagagc gttatcaaat atgaagaatt attttccaat
      301 tggcaggatc gtcacgacgg tcattttaac cgctggcttt atcgccggtg tgctggatgt
      361 gcaggcgcaa gataaaagcc tcggagggct gatttccaag ctgaaccgtc tggaacgcga
      421 tatccaaaca ctcaatcgtc aagtttataa aggcggcaca ccgcccaaac ctgtgtcttc
      481 agctcccaag cttgttattt ctcagccggc ggcaataccg gccagcagta aagcctatat
      541 tattcgcctc gaagaacggt tgtcgcagct tgagggcgaa ctacaaaaca cgaccaatgc
      601 catcgaaagt atgaaccaca acgtcgatca aatgaaaatt cggcttgata agctggtggt
      661 tgatattgat tttcgcctga cgcgtcttga aagtggggca cccagatctg gcctgccagg
      721 acagccgggt gcggcagggc agcttcaacg gccgttcggc ccgccgacag tttctgccgt
      781 gccacgtgcc ccaggggttc agcagatcgg cccgaccacg ggcggtcccg tggtgacttc
      841 aggtaagcct ggcacgttgg gaaaaattaa tgaaactgat ctaagctcag tacaacgcga
      901 tgccaggaat ttgcatctgg gccaagcgcc acaggcaacc cagtccgcca ccgccgcacc
      961 gccgcctgcc gccgtaaaaa aatcagtgct gcctgcgggt acgccaagct cacagtacaa
     1021 attcgctttt tccatattgc gcaaagcgga ttacgacaat gcgaaactag ccttgcagga
     1081 attcattgaa aaacatcccc aagacaagct gacgccgaac gcccgctatt ggctcggtaa
     1141 gacctattat gtgcgggcga attaccggga tgctgccgaa gctttcttgc ggggctttca
     1201 gcaagcaccc aaagggccca aagcgccaga tacgttactg atgcttggca agtctttggc
     1261 gaatttaaag aaacagtcag atgcttgtgc aacttttagc aagctcactc aggattatcc
     1321 ggatgcctcg gccaacatta aaaaacagct caaacgggaa agtggacgca cgggttgtaa
     1381 ataaatcgcc ttcaagcgat gcgatttcaa ctcgggagtt tgccgggttt tttgcgccgt
     1441 tttcagactt aatttcaaaa aatgccccgt ttgccgtcgc tgtttctggt ggtgcggaca
     1501 gtatggcatt gtgcctgctg gcagacctat gggcaaaaat gcgaggatgt caggtcactg
     1561 ccttaactgt tgatcatggc ttacgcgctg aagcggcggc agaagctaaa actgtcgcta
     1621 gctggttatc tactcgtgac attgagcatc atattttgag ctggcaaggt gttaaaccgg
     1681 cctcaggtat tcaagcggca gcgcgcgagg cgcggtacgc tttgatgatg gattggtgcc
     1741 aagaaaataa tgttaatgtc ttgatgaccg cgcatcatct cgaagatcag gttgaaacgt
     1801 tcttgttgcg ggccgagcgg ggcagtggtt tagatggcct tgcctgtatg gctgctgaga
     1861 cgaaaatgag cgggattata ttgttgagac cgctgttatc agtttcgaaa aatcgattga
     1921 ggggaactct cattgcgttg aaccaggact ggctggaaga tccttcgaac caaaatcccg
     1981 cctaccgccg atccaaaatg cgaaaacttg tcgcggcaat ggaacaaagt ggtcaagatg
     2041 ccaatcgcat aagcgcctta atc
//
LOCUS       DASCNL010000185         6141 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000411511, whole genome shotgun sequence.
ACCESSION   DASCNL010000185 DASCNL010000000
VERSION     DASCNL010000185.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6141)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6141)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6141
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000411511"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            328..891
                     /locus_tag="QF359_02435"
     CDS             328..891
                     /locus_tag="QF359_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HJO85796.1"
                     /translation="MGIQEIRIHGRGGQGTVMASKILAKAIVEEGQFALAIPSFGFER
                     RGAPVTAFLRVDDKEIRTVTNIYNPDNIICIDPTISRAVDIFKGFRNGGIWVQATKKS
                     LDNLDIPETVAKLGLCDAFGIALDIFNKPITNSIMLGAFAKTSGMVSLDSLKEGLTTA
                     NFRDAGLDQNMAAIERGYNETQVHQIN"
     gene            902..1195
                     /locus_tag="QF359_02440"
     CDS             902..1195
                     /locus_tag="QF359_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HJO85797.1"
                     /translation="MLKQARPRFDPATIPNDLCPIGTELITMLPGDWRSERPVVDREK
                     CVKCATCWLLCPVQCIIEMAAWFDISYDSCKGCGICAIECPHNAIAMVIETED"
     gene            1198..2424
                     /locus_tag="QF359_02445"
     CDS             1198..2424
                     /locus_tag="QF359_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylglyoxylate dehydrogenase"
                     /protein_id="HJO85798.1"
                     /translation="MPDAALTNEPKSIVCDGNEAAAWAVSLAKPDMVAVYPITPQSSL
                     VEYVSQFIADGKIDADLMDVEGEHSVMSVLHGACLAGARTYTATCGPGLYYMFEPYVR
                     TPGMRLPIVMSVVTRDGLTPQSVWGGQQDAMMLRETGWIQIYCESVQEVLDSLIMAFR
                     IAEHRDVMLPVNICHDGNYLSYGVTKVFLPEQEMVDDFLGDKDTNWHVALDPDRPMSV
                     DPLTGGEGPGGPSTFVRYRQGHCAGMQNALRVITETHEEWERKFGRCYAPLIEEYRLD
                     DADYAIVTIGSMSGAGKDAVDVAREQGQKVGLIRVKTFRPFPMEALRNALTKVKAIGV
                     VDRSVSFAWNCGPVFQEIQAALYQLKERIPAISFIGGLAGSDITGEHFARVIEATGNQ
                     LAGDMTESPVWLNENE"
     gene            2441..3703
                     /locus_tag="QF359_02450"
     CDS             2441..3703
                     /locus_tag="QF359_02450"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HJO85799.1"
                     /translation="MEQTKYLIAGCSHAALSALNSIRMLDQDGSLTLVAKDDHLPYSP
                     TVLPYIVSGQSKPEKVKLRDDEFFAQNKVNFISGAGLSTLDVDNNSVTLQNGQEWQYE
                     KLLLATGAAPAIPPIPGLTDTPYHVLRTMDDAVNLHAALESAKSAVVLGGGLIGMHAA
                     ENLIKVGVQVTIVEMRPQVLPGYFDAEAAKIIEQTFIENGVAMRIGNTVVGAAPDGEG
                     AKVSLDSGDEITADLLLVCTGVAPVISYLEDGPVETDQGILVNDCMATNIANIWAAGD
                     VAQAVNFYSGEKSVGGILPAAVEQGRIAGMSMINDPAINPYPGGVPLNTYGFFGNQAI
                     SVGVSDENALPKDTEVLLNVNEEEMTYQKILIGEGCLLGISGINTDFDPGIMWQLVLQ
                     RVDLEPVKEEFLNSPTDTGRDLMSRTWR"
     gene            3714..5090
                     /locus_tag="QF359_02455"
     CDS             3714..5090
                     /locus_tag="QF359_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO85800.1"
                     /translation="MGKDKPLGHSHNTIAFHQDKCDGCGECMTVCAEAKSGTADTLHS
                     RLKIVPSIAANDSFELALCRQCGDPKCVLNCPSGSLTKNHKTGVVPWDAEKCVDCLLC
                     TVGCAYGGITYNAAAGHVMKCDMCDGDPACVKSCPTGALEYNRSAEIYNNYGELEDLF
                     VPGLAACQGCNSELLIRHTMRKIGSNAVVATPPGCIAGMGTVGFNGKTGSKIPVFHPL
                     LTNTASMLAGAKRYYNRIGRDVTMVALAGDGGTVDAGFQSLSGAAERGEQMLYICVDN
                     EGYMNTGMQRSGSTSFGSWTSTTPVGETLHGKTQDAKNMPVIMMMHNCEYVATASLAF
                     MDDYYEKLDKALAAAKRGMAYLHVYSPCPTGWRIPSESTNEVCRKAVETNFVTLWEFA
                     PDEGLRFTHSTDDPLPVEEYLNLSGKYRHLDDAQLTHIENSVERKVAFLNGFMLATSD
                     DGAESLAQ"
     gene            complement(5354..5941)
                     /locus_tag="QF359_02460"
     CDS             complement(5354..5941)
                     /locus_tag="QF359_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HJO85801.1"
                     /translation="MNNTALVLVDMQNDFLHADGAYARGGATSEHIAALPTKLKPVAE
                     AVRNAGGWVISTHFTLVPGKGDKPFIAEHLKELRPFLTKGDFVPGGFGHALIDDLAPA
                     DLAVEKIAYSAFHMSRLEWMLKQAGITDLIFGGIVTNGGVASTVRDAHVHGYHCTVLS
                     DGCAAFDPAVHEVSIEALRSVAEITSCAEVISKLG"
     gene            complement(5938..>6141)
                     /locus_tag="QF359_02465"
     CDS             complement(5938..>6141)
                     /locus_tag="QF359_02465"
                     /inference="COORDINATES: protein motif:HMM:NF039581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85802.1"
                     /translation="TATRRVWIDGKWWEADVYARLDVPENAVVPGPALLEQPDTTIFI
                     DPDLEGLVDRFGNLVISRKETCA"
BASE COUNT         1436 a         1658 c         1639 g         1408 t
ORIGIN      
        1 tgctggtaac tttttctaag gcgcgggccg cggttcctta ttcgatcaga tagttgcggc
       61 cataatttat ggtgccagcg cataggttag accgccacgt tcgtgcagca tctcaagcca
      121 ggcactgcta aacatatgcg tgtaaatatt aactatggtc atgctggatt ttaactattt
      181 tgtctaaata tttgaatcga taacattcac gtatctgaac accaaaaaac tttgccgttg
      241 attgatctaa atcaacaata tggcgccaaa tttatgcttc aataatatca cgaactttat
      301 gaatatgatg aattcggaaa caaggaggtg ggcattcagg aaatacgcat tcatggccgg
      361 ggcggccagg gcaccgtcat ggcgtcaaag atattggcca aggcgattgt cgaagaaggc
      421 cagttcgcgc tcgccattcc gtctttcggt tttgagcggc gcggcgcgcc ggtgaccgcc
      481 tttctgcgcg tcgacgacaa ggaaatccgg acggtcacca atatctataa cccggacaat
      541 attatctgca tcgacccgac catttccagg gccgttgaca tattcaaggg cttccgcaac
      601 ggcggcatct gggtgcaggc gacgaaaaaa agtctcgaca atctcgatat accagaaacc
      661 gtggccaagc ttggcttgtg cgacgccttc ggcatagccc tcgatatctt taataaaccg
      721 atcaccaatt cgattatgct gggcgctttt gctaaaacct cgggcatggt ctccctcgat
      781 tcccttaaag aaggtttgac gacggcaaac ttccgcgacg ccggactgga tcagaatatg
      841 gcggccatcg aacgtggcta taacgaaacc caagttcacc agatcaattg aagaaggtgc
      901 catgctaaaa caagctcgcc cccgttttga tccagcgacg atccccaacg acctgtgtcc
      961 catcggcacc gaactgatta ccatgctgcc tggcgactgg cgctcagaac gccccgtcgt
     1021 tgaccgcgaa aaatgcgtca aatgcgctac ctgctggctg ctttgtccgg tgcaatgcat
     1081 tatcgagatg gccgcctggt tcgatatttc atacgattcc tgtaaaggtt gcggcatctg
     1141 cgctatcgaa tgcccgcaca acgccattgc catggttatt gaaacggaag actgatcatg
     1201 ccagatgcag cactgaccaa cgagcccaag tccattgtct gcgacggtaa tgaagccgcc
     1261 gcctgggcag tttccctggc caaaccggac atggtagcgg tctatcccat cacccctcag
     1321 tcttctttag tcgaatatgt ctcgcaattt atcgccgacg ggaaaatcga cgctgacctg
     1381 atggacgtgg agggcgagca cagcgtcatg tcggtcttgc acggcgcctg tctggctggt
     1441 gcccggacct atacggcgac gtgtggccct ggcttatatt atatgttcga accctatgta
     1501 cggacgcccg gcatgcgcct gccgattgta atgtcggtgg tcacccgcga cggcttgacg
     1561 ccgcaaagcg tctggggtgg tcaacaggac gccatgatgc tgcgcgaaac cggatggatt
     1621 caaatttact gtgaaagtgt tcaggaagtc ttggattcgc tgatcatggc cttccgcatc
     1681 gccgagcatc gggacgtcat gctgccggtc aatatctgcc atgacggcaa ctacctgtct
     1741 tacggcgtga ccaaggtttt cctgccggaa caggaaatgg tggatgattt tctgggtgac
     1801 aaagacacca actggcatgt tgccctcgac cctgaccgac cgatgtcggt tgaccctctg
     1861 acgggtggag agggccccgg tggaccaagc acttttgtgc gctaccgcca gggtcattgc
     1921 gccggcatgc aaaacgcctt gcgggtcatt actgaaaccc atgaagaatg ggagcgcaaa
     1981 ttcggccggt gctatgcacc gctgatcgag gaataccggc ttgatgatgc cgactatgcg
     2041 atcgtcacca ttggcagcat gtcgggcgcc ggtaaagacg ctgtcgatgt tgctcgcgaa
     2101 caaggccaaa aagttggcct gatcagagtt aagacgttcc gccccttccc catggaggcc
     2161 ctgagaaacg cgctgaccaa ggtcaaggcc atcggcgtgg ttgaccgatc ggttagtttt
     2221 gcttggaact gcggcccggt ttttcaggaa attcaggcgg ctttatacca attgaaagaa
     2281 cgcatcccgg ccatcagctt catcggcggt ctggcaggtt cggatatcac cggcgaacat
     2341 ttcgcccgcg tgattgaagc cactggcaat caactcgctg gcgacatgac cgaaagcccg
     2401 gtctggctga acgagaacga gtaaacggat aacgaggatt atggaacaga caaaatatct
     2461 tattgccggc tgttctcacg ccgctctttc ggcgctcaat tcaattcgca tgctggatca
     2521 agatggcagc cttaccctgg tagccaagga cgaccatctg ccctattcac cgacggttct
     2581 cccttatatc gtgtccggcc agtcaaaacc agaaaaggtg aaattgcgcg acgatgagtt
     2641 tttcgcccag aacaaggtga attttattag cggcgctggc ttgagtacgc ttgatgtgga
     2701 caataactcc gtcaccctgc agaacggcca agaatggcaa tacgaaaaac tattactggc
     2761 gaccggtgct gcgcccgcaa ttccgccgat accaggcttg acggacacgc cctaccatgt
     2821 gcttcgcacc atggacgacg ccgtcaattt gcacgccgct ctggagagcg ccaaatcggc
     2881 ggtcgttttg ggtggcgggc tgatcggcat gcatgcggct gaaaatctaa tcaaagtcgg
     2941 tgttcaggtt accatcgttg aaatgcggcc ccaggttcta ccaggttatt tcgacgctga
     3001 agccgccaag atcatcgaac agacttttat cgaaaatggc gttgccatgc ggatcggcaa
     3061 cactgtcgtc ggtgcggcgc cggatggcga gggtgccaaa gtaagtctcg atagcggtga
     3121 tgaaatcact gccgatttat tgctggtttg caccggtgtt gcgcctgtca tctcttatct
     3181 ggaggacggt ccggtggaaa ccgatcaggg cattttggtc aatgattgca tggcgacgaa
     3241 tattgccaat atttgggctg ccggcgatgt cgcccaggcg gtgaattttt acagcggtga
     3301 aaaatccgtc ggcggcattc taccggcggc ggtggaacaa ggacgcatcg ccggcatgtc
     3361 gatgattaac gatccagcca tcaatcccta cccgggaggc gtaccgctca atacgtatgg
     3421 tttcttcggc aatcaggcga tttcggttgg tgttagcgac gaaaatgcgc ttcccaaaga
     3481 caccgaagtc ttactgaatg ttaacgagga agagatgacg taccagaaaa tccttatcgg
     3541 cgagggatgc ttgctcggca tatccggtat caacacggat ttcgatcccg gtatcatgtg
     3601 gcagctcgtg ctccagcgtg tggatttaga gccggtgaag gaagagtttt tgaacagtcc
     3661 aaccgatacc ggccgtgatt tgatgtcgcg gacctggcgt taagcaagcg atattgggaa
     3721 aggacaaacc cttgggccac agtcacaaca caattgcttt tcaccaggat aaatgcgacg
     3781 gctgcggcga gtgcatgacg gtctgcgccg aagctaaatc cggtaccgct gacaccctgc
     3841 attcgcgcct taaaatcgtg ccgagtatcg ccgccaacga tagcttcgaa ttggctttgt
     3901 gccggcaatg cggcgacccg aaatgcgtct tgaattgtcc gtccgggtct ttgaccaaga
     3961 accacaaaac cggcgtcgtt ccctgggatg ccgaaaaatg cgtcgattgc ctgctttgca
     4021 cggtcggctg tgcctatggc ggaattacct ataacgccgc cgcaggtcat gtcatgaaat
     4081 gcgacatgtg cgacggtgat cctgcttgtg ttaagtcctg cccgaccggt gccctcgaat
     4141 ataatagatc ggcggagatt tataataatt acggcgaatt ggaagatctg ttcgtaccgg
     4201 gacttgccgc ctgccaaggc tgtaattcag agcttctgat ccgccatacg atgcgtaaga
     4261 ttggctccaa cgctgtcgtc gccacgcccc cgggctgcat cgccggcatg ggcacggtcg
     4321 gcttcaatgg caagacgggt tcaaaaattc ccgtttttca ccccctttta accaatactg
     4381 cctcgatgct ggcgggcgcc aagcgctatt ataaccgcat tggccgggac gtcaccatgg
     4441 tcgccttggc gggcgatggc ggcactgtcg atgcgggctt tcagtccctc tccggcgccg
     4501 ccgaacgggg cgaacagatg ctctacattt gcgtcgacaa cgaaggctac atgaacaccg
     4561 gcatgcagcg ttcaggcagc acctccttcg gttcctggac ctcgaccacg ccagttggcg
     4621 aaactctgca cggcaagacc caggacgcca agaacatgcc ggtcatcatg atgatgcata
     4681 attgtgaata tgtggcgacg gcatcgctgg cgttcatgga cgactactac gaaaagctgg
     4741 ataaagcgct cgccgccgcc aagcgcggta tggcctatct gcatgtctat tcgccgtgcc
     4801 cgacgggctg gcgcatccca tccgagtcaa ccaacgaggt ttgccgcaag gcagtggaga
     4861 cgaattttgt caccttgtgg gagtttgccc ccgacgaggg tttgagattt acccattcta
     4921 ccgatgaccc cctgccggtc gaggagtatt taaacctgtc cggcaagtac cgccatttgg
     4981 atgacgcgca actaacccat atcgaaaact ccgtcgagcg gaaagtcgct ttcctgaacg
     5041 gctttatgct ggcgacgagc gacgacggcg ccgaatctct cgcccaataa ttgaggattg
     5101 aatttaggaa attaagccaa aggacgattt tgtcagagta aatcccactt tgacctcatt
     5161 gtagcatttt cataatgttt ttggataaaa aatcgcaatc tattccgcta tttcaaaaca
     5221 tcgcctgaga ttatccgcct tgctgtgatg atgtatgtca ggagtcctct ttcgttacgc
     5281 aatgctgaag atctgcttca tgggtgcagt atcgatttga gccacgaaac cgtgcacgta
     5341 ccaaccggct gattcaaccc agttttgata ttacttcagc gcagcttgtg atttcagcga
     5401 cgcttcgaag cgcttcgatg gagacttcgt ggacagccgg atcgaacgct gcgcagccat
     5461 cagacagaac cgtacaatga tagccatgga catgggcgtc ccggaccgtt gaggcgacac
     5521 cgccattggt gacaatgccg ccaaatatta aatccgtgat tccagcttgt ttgagcatcc
     5581 attccagccg gctcatatgg aacgcagaat aggcgatctt ctcgaccgcc agatcagccg
     5641 gtgcaagatc atcaatcagc gcgtgaccga aaccgccggg gacaaaatca cctttggtta
     5701 ggaacgggcg aagctctttg agatgttcgg caataaatgg cttgtccccc ttgcccggca
     5761 ccaaggtgaa atgtgttgag ataacccagc caccggcgtt acgcaccgcc tcggcgaccg
     5821 gtttcagctt ggtggggaga gcggcaatgt gttccgatgt tgcgcctccc cgcgcatagg
     5881 cgccgtcagc gtgcaaaaaa tcattttgca tatcaaccag aacgagagct gtattgttca
     5941 tgcacaagtt tctttcctcg aaataaccag attaccgaag cggtcaacta aaccttctaa
     6001 gtccgggtcg ataaaaattg ttgtgtccgg ctgctctaat aaagccgggc ccggcacaac
     6061 ggcgttttcc ggcacgtcca atctggcgta aacatcggcc tcccaccatt tgccatcgat
     6121 ccagacccgc cgcgtagctg t
//
LOCUS       DASCNL010000186         1271 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000411857, whole genome shotgun sequence.
ACCESSION   DASCNL010000186 DASCNL010000000
VERSION     DASCNL010000186.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000411857"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(444..>1271)
                     /locus_tag="QF359_02470"
     CDS             complement(444..>1271)
                     /locus_tag="QF359_02470"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HJO85803.1"
                     /translation="RKDSLWSQALGPFENPVEHGTSRAKIINVMRRDKDYRRRYKELF
                     GALPKPGDRAGIFRAFTNLGKSIAAYERNIMPAPSKFDRYVEAVLSNKVPSPENQLSI
                     EEIAGLKVFISDNQGQCIRCHNGPMFTDNHFHNIGSHIVGEDATEQGRATGIQLVLSD
                     ETNCHSKFNDVSIIDRTATCSELQFARQNSKELLGAFKTPTLRYLAKTAPYMHAGQFS
                     TLEDAIWLYRDVPHATVGQSELRALTMSDAQFRQIEDFLATLNGPIRAPEKYLKPPE"
BASE COUNT          309 a          280 c          322 g          360 t
ORIGIN      
        1 gcctcaatgt tgctaattgg tttttgaaaa cgtccagatc aaggttcctc acggatactt
       61 ggagtggagg acaccttgaa ctggcggtga caccgtgaca cttgaaacgt accgccatac
      121 ttcatggcgg ttctgaagac tactttcttt acttaacgtc ttgtgatcca actgacatca
      181 gttggtggtg aggattatta aggacggcca aacgtcctta atgcacccca gtaggggtat
      241 gatgttgtag aaacacttcc cccgcctttt aaaaagaggc cactaatgtt ttgagccaca
      301 ggcttaaata agatcaggtg tcacccaatg tttgctttcg ggtgtaaagc agacgttatt
      361 ttgacgccac ctgatgtcgg ctaatagcca aaagcagaca ttaccgatta tttgaaaatc
      421 tgaatattcg atttttttag gatttattcc ggtggtttga ggtatttttc cggtgcgcgg
      481 atcggtccgt ttagggttgc caagaaatct tcaatttggc gaaattgtgc atcgctcatg
      541 gtgagggcgc gtagttccga ctgaccaaca gtggcgtgtg gcacgtcacg gtaaagccag
      601 atggcatctt caagcgtgct aaactggccg gcatgcatat agggggcagt tttagcaaga
      661 tatctaagtg tcggtgtttt aaacgcgccc aaaagctcct tggagttttg gcgggcaaat
      721 tgtaactcgc tgcaagtggc tgttcggtct attatggaga catcattgaa tttactgtgg
      781 caattggttt cgtctgacag gacaagctga attccagtgg cacgtccttg ctcggtcgca
      841 tcctcgccaa cgatgtgaga gcctatattg tgaaagtgat tatccgtgaa catgggaccg
      901 ttgtggcagc gaatacattg accttgatta tcagagataa aaacttttag gccagctatt
      961 tcctcgatag ataattggtt ttcgggtgag ggtactttat tgcttaatac cgcttcgaca
     1021 tatctgtcga acttcgacgg tgccggcatg atattgcgtt cataggccgc aatagacttg
     1081 cctaaattgg taaaagcgcg gaaaataccc gctcggtccc cgggctttgg cagagcccca
     1141 aagagctctt tataacgacg gcggtaatct ttatcccggc gcatcacgtt gatgattttg
     1201 gcacggctgg taccgtgctc aaccggattt tcaaacggcc ccaatgcttg cgaccacaga
     1261 ctgtctttgc g
//
LOCUS       DASCNL010000187         1292 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000415322, whole genome shotgun sequence.
ACCESSION   DASCNL010000187 DASCNL010000000
VERSION     DASCNL010000187.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000415322"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="QF359_02475"
     CDS             <1..461
                     /locus_tag="QF359_02475"
                     /inference="COORDINATES: protein motif:HMM:NF020039.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HJO85804.1"
                     /translation="IYIVETTGQCVSRMKVAEDGSLSKREVFGPSKLGKPGKNCFPDG
                     ITFDAYGNLWGTLVMSDQIFAITPEGDYTVILDDDNEAASEALETAFRNDEATPELML
                     AAGGTIAPWFASVTFGGPELKTAYIGSLRGTRIPYFTSPVAGLPMAHWND"
     gene            complement(578..1201)
                     /locus_tag="QF359_02480"
     CDS             complement(578..1201)
                     /locus_tag="QF359_02480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85805.1"
                     /translation="MIRFLVLLLALAGGTFSAHAQDKAPDLSAFSPETRKEYEATQKF
                     INQTQSKITLVRTQTETRAKEIEALANRIDKIITKMSGQGEDNTALLSEIAVLNELLA
                     LERQTTTDLRKDNSALMTAVETHKTANAEIKQKHDQELKLKQADLADAQKRLDNALAT
                     AASREKTNNVLVSNVETLTKETERLKKQVKILKENRYRPKRRVGTPN"
BASE COUNT          277 a          299 c          334 g          382 t
ORIGIN      
        1 atatttatat tgttgaaacc accggccaat gtgtatcgcg gatgaaagtg gcggaagacg
       61 gttcgctgtc taagcgtgaa gtatttggcc ctagcaagct tggcaagccg ggcaaaaatt
      121 gttttccaga tggcattacg tttgatgcct acggtaatct ctggggaacc ttggtaatgt
      181 cggatcagat tttcgctatt acccccgaag gcgattacac tgtcatttta gatgatgata
      241 atgaagctgc ctctgaagcg ctcgaaaccg cctttcgcaa tgatgaagca acaccggaac
      301 tcatgttggc tgccggcggt accatcgccc cgtggtttgc cagcgtaact tttggcggac
      361 cggaacttaa aaccgcctat attggcagct tacgcggtac gcgtattccg tatttcacct
      421 cgccggttgc tggtctgccg atggcgcact ggaatgattg aagggttgta aataatggcg
      481 ggtgctcttc atcaaatgac ggctgaatat aatctggcgg aagaccgtat acgtgtgctc
      541 agggattccg caccggaaaa ataatcggaa aataatatca attaggcgtg cctacccgcc
      601 gcttaggccg atagcggttt tcttttagaa ttttcacctg tttcttaagg cgttcggttt
      661 ccttggtcag cgtctcgacg tttgagacca ggacattatt ggttttttct cgcgacgccg
      721 ccgttgcgag ggcgttgtct aaacgttttt gggcatcggc tagatcggcc tgcttcagtt
      781 ttagctcttg atcgtgtttt tgcttgattt cagcgttggc cgttttatgc gtctccactg
      841 ccgtcataag cgcggaatta tctttgcgta aatcggtagt ggtttgccgt tcgagcgcca
      901 gcaattcgtt taagacggca atttccgata gcaaggccgt attgtcttcg ccctggcccg
      961 acattttggt tatgatttta tcaatccgat tggcgagcgc ctctatttcc ttggcccgtg
     1021 tttcggtctg ggtgcggacg agcgtgatct tgctttgagt ctgattgatg aatttctgag
     1081 ttgcttcgta ttcttttctg gtttccgggc taaaggcgct gagatcgggc gccttatctt
     1141 gggcgtgcgc gctgaaagtt ccgccagcca acgcgagtaa taaaaccaaa aagcggatca
     1201 tcagccgcaa ctccccaaac aatttattat tggctcaatg ctaaaccaaa accgctatcg
     1261 gagtcattag gggagttgca ttcatatttt tt
//
LOCUS       DASCNL010000188         1584 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000422369, whole genome shotgun sequence.
ACCESSION   DASCNL010000188 DASCNL010000000
VERSION     DASCNL010000188.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000422369"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="QF359_02485"
     CDS             complement(<1..518)
                     /locus_tag="QF359_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3501 family protein"
                     /protein_id="HJO85806.1"
                     /translation="MTLKTALTREDILDLAAYEKIREQRRSEIVAAKKLKRVAVGPYA
                     TFYFESFDTMWYQVQEMLRIEKGGEAQLTDELEAYNPLIPKGKELVATVMFEIDNPDI
                     RTAFLTGLGGVEDCMMIGINGEQVIAKPEQDVDRTNAAGKASSVQFVHFNFSADQITK
                     FKENNARVTVGI"
     gene            complement(508..>1584)
                     /locus_tag="QF359_02490"
     CDS             complement(508..>1584)
                     /locus_tag="QF359_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008612982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HJO85807.1"
                     /translation="EFDLDFPHLMLRYRAMEFKQGKVKFAHRQLTETDRNGKLAGPVA
                     PLVNWATKRGNALTRPLLEKITGIHQDAGLPNFNRSPFEKKRPKKPKETPATLNNSGR
                     KAALYATCFVNYNNPGIGEATRAILAKNGVETEIVYPSCCGMPQLEQGDLARVAENAK
                     KVSAELVQWIDLGYDIVALVPSCTFMLKFEWPLIVPDDENIQRLGKATFDTTEYIVDM
                     AKKEGLAEGLSKLEGPISLHLACHARAQNMGPKAAEMLRLIPDTEIDVIERCSGHGGS
                     WGVMKDNFEVALKVGRPPARKALESGAKYIVSECPLAREHILQGIEKLDEENALKNVY
                     SVQHPVQILAHACGLTGENSQNDP"
BASE COUNT          356 a          403 c          400 g          425 t
ORIGIN      
        1 ttgatgccaa ccgttacgcg agcgttattt tctttgaatt tggtgatctg atcggcggaa
       61 aaattgaaat ggacaaattg aacggatgaa gctttaccgg ctgcattggt ccggtcaaca
      121 tcttgttccg gtttggcaat aacctgctcg ccattaattc caatcatcat acagtcttcg
      181 acgccgccga ggccggtcag aaaagcggtt cgaatatcag gattatcgat ctcaaacatc
      241 acggttgcaa ccagttcttt gcccttcgga atcaaaggat tataggcttc aagctcgtcg
      301 gtaagttggg cctcgccgcc tttttcgatg cgcagcattt cctgaacttg ataccacatg
      361 gtatcgaaag attcgaaata aaaggtggca tagggcccga ccgccacccg cttcagtttc
      421 tttgccgcaa cgatctcgct acggcgctgc tcgcggattt tttcataagc tgctaaatcc
      481 agaatatcct cacgggtaag tgctgtttta agggtcattc tgagaatttt ctccggttaa
      541 cccacaagcg tgggcgagta tttggaccgg gtgttgcacc gagtaaacat ttttcagggc
      601 attttcttca tcaagtttct caatgccctg cagaatatgt tcgcgtgcta acggacattc
      661 ggagacgata tatttagcgc cgctctcaag tgccttgcgg gcgggcgggc ggccaacttt
      721 aagcgccacc tcgaaattat ctttcatcac cccccaggag ccgccatgac cggagcagcg
      781 ttcgattacg tctatttctg tgtcggggat aagccgcagc atctcagcgg ccttagggcc
      841 catattttgc gcccgggcgt gacaggcaag atgcaagctg atcggccctt ctagcttact
      901 aagaccttcc gccagacctt cttttttcgc catatcgaca atatattccg tggtatcgaa
      961 ggtggctttg ccgagccgtt ggatattttc atcatctggc acgatcaacg gccattcaaa
     1021 ttttaacatg aaggtgcagg acggcacgag cgcaacaatg tcgtagccca gatcgatcca
     1081 ttggacgagt tcggcggaca cttttttggc gttttcggca acccgcgcaa gatcaccttg
     1141 ctccaattgc ggcataccgc agcaggacgg atagacgatt tcagtttcaa caccgttttt
     1201 tgccaggatt gcccgggtcg cttcgccaat acctggattg ttgtaattga caaaacaggt
     1261 tgcgtagagt gctgccttgc ggccagaatt atttagtgtc gccggagttt ctttaggttt
     1321 ttttgggcgt ttcttttcaa acggcgaacg gttaaaattc ggcagtccgg cgtcttggtg
     1381 aatgcctgtg atcttttcca gcaaagggcg ggtcagagca ttgccgcgct tagttgccca
     1441 attgacaagc ggcgcaacgg gcccggcgag tttgccgttg cggtcggtct cggtgagctg
     1501 gcgatgggca aacttaacct taccctgttt aaactccatc gcccggtagc gcagcatcaa
     1561 atggggaaaa tccaaatcaa attc
//
LOCUS       DASCNL010000189         4014 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000426277, whole genome shotgun sequence.
ACCESSION   DASCNL010000189 DASCNL010000000
VERSION     DASCNL010000189.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4014)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4014)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4014
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000426277"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            320..3082
                     /gene="secA"
                     /locus_tag="QF359_02495"
     CDS             320..3082
                     /gene="secA"
                     /locus_tag="QF359_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HJO85808.1"
                     /translation="MFDAIARRLFGSANDRYVRGLSSIVDQINALEPSVENLSDDALR
                     GRTDQLKDRLKNGESLDDILPDAFATVREAGKRALGERPYDVQLVGAIVLHRGMIAEM
                     KTGEGKTLTSTMTVYLNALSGEGVHIVTVNDYLASRDAEWMGKIYKLLGLTVGCVIPN
                     LTEEERTEAYNCDITYGTNSEFGFDYLRDNMKFTLEDMVQRPFNYAIVDEVDSILIDE
                     ARTPLIISGASEDSSELYDAIDKIIPELIEEDYEKDEKVKAVTLTDAGNEHIEDLLRE
                     AGLLTEGTLYEYTNISLVHHVNQALRAHKLFELDTDYIVHEGQVVIIDEFTGRMMEGR
                     RFSEGLHQALEAKEGVEVESENQTLASITYQNYFRMYPKLAGMTGTAMTEAGEFEEIY
                     KLESTEIPTNEPCIRDDQDDEVYRTATEKHQAIMAMIKDCQIRKQPVLVGTVSIEKSE
                     EISDLLKKDKIKHQVLNARFHEQEAMIIAQAGAPGSVTIATNMAGRGTDIQLGGNIDM
                     LLSQQLEGETDKTKRTEIEARVRQEVLDGREVVVAAGGLFIIGTERHESRRIDNQLRG
                     RSGRQGDPGGSKFYLSLEDDLMRIFGSERMDGMLQKLGLEEGEAIVHTWINKALEKAQ
                     QKVEARNFDIRKNLLKFDDVMNDQRKVIYEQRKELMGSEDVSVTIMDMRHNVVESVVA
                     QCIPEKAYQEQWDTAALHEEGLRLFGLDLPVEDWGKEEGVADEQILERINDAANRKMA
                     EKAASWGPVVMRDIEKNLLLQVLDQVWKEHLLALDHLRQGIGLRAYAQKDPLNEYKGE
                     AFDMFNGMLTELDERITIILAHMELQLTDPSELGLHGTTDTFEITQDTAGFGYGDDLL
                     YGEAYEEGEFDGTGLSELPASPLVVRESAAVIDPEDPSTWGKVGRNASCPCDSGKKFK
                     HCHGAA"
     gene            3088..3924
                     /locus_tag="QF359_02500"
     CDS             3088..3924
                     /locus_tag="QF359_02500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HJO85809.1"
                     /translation="MSNTRSIANVYAGVPTTDGAGVKLTRMIGTPELDQVDPFLMLDR
                     MDTDEPDAYIAGFPDHPHRGFETVSIMFEGQMHHWDSVGNEGELKPGDVQWMTAGRGI
                     IHSEIPEMLEERLRGFQLWINLPAKHKMVAPKYQDIPADQIPVVTFDGGSVRVIRGTY
                     EELTGPAESLMPVRVLDVNLTTGAGWSISLEDGRNLFLCVHEGSVNSDSREVAAPSII
                     TFDGYGDVQVTAGDSGASILYCEGTALNEPIARYGPFVMNTHSEIRQAAEDFNSGFFG
                     KL"
BASE COUNT         1021 a          996 c         1078 g          919 t
ORIGIN      
        1 aaatgagagt taagtaagct gtccccttaa ttaactattt cccgtccata ttgaaagttt
       61 ttacatcggc gaccttgcaa agctcagcga cgacagcgtc ggggagctct ttggcgatgg
      121 tatcacgcaa ttgacccgga cttcctccgc aatttgttga catttatgcg agggcaatcg
      181 ttgacagaaa ggtgccagag ttctatctct gtgctccaga ttcgaagtgg aattaagtta
      241 gaaatttcct gggttatatt gagattttca attccccgcc tccgaactat ttaagtgttg
      301 aatttattga ggaaattgaa tgtttgacgc catcgcccgg cgcctttttg gctcagccaa
      361 tgaccgctac gtacgcggtc tgagttccat cgtcgaccag atcaacgcgc tcgaaccatc
      421 ggtcgaaaat ttgagcgatg acgcgttgcg cggccggacc gatcaattga aggatcgcct
      481 caaaaacggc gaatcccttg atgatattct acccgacgct ttcgccacgg tgcgcgaagc
      541 cggcaaacgc gccctcggtg aacgtccgta tgatgtccaa ttggttggcg ccattgtgct
      601 gcatcgcggc atgatcgctg agatgaaaac cggtgaaggt aaaaccctga cctcgaccat
      661 gacagtttat ttaaatgcgc tttccggcga aggcgttcat atcgtcacgg tcaatgatta
      721 tctggcttct cgcgatgctg aatggatggg taaaatctat aaactactcg gtctgacggt
      781 cggctgtgtc attcccaatc tcaccgaaga agagcgtacc gaagcctata attgtgatat
      841 tacttacggc accaatagtg aattcggctt tgattatctg cgcgataata tgaagtttac
      901 gctcgaagac atggtgcagc ggccgttcaa ttatgccatc gtcgatgaag ttgattcgat
      961 cctgattgat gaagcacgga caccgctaat tatctccggt gcctcggaag attcatctga
     1021 actctatgac gctatcgata aaattattcc ggaacttata gaagaagatt acgaaaagga
     1081 tgaaaaagta aaagccgtta ccctgaccga tgccggtaac gagcacatcg aagacctgct
     1141 gcgggaagcc ggtctgctca ccgagggtac gctttacgaa tataccaata taagtctggt
     1201 gcaccatgtt aatcaggcgc tcagggcgca caagctgttc gagcttgata ccgactacat
     1261 cgtgcatgaa ggccaggtgg ttattattga tgagttcacc ggccgtatga tggagggccg
     1321 ccggttctca gaaggcctcc accaggcgct cgaagccaaa gaaggtgtcg aggtcgaaag
     1381 tgaaaaccaa accctcgcct cgatcaccta tcagaactat ttccggatgt atccgaagct
     1441 ggccggtatg actggtacgg cgatgacgga agcaggcgag ttcgaagaaa tttataaact
     1501 tgaatcgacc gaaataccca ccaatgagcc ttgcatccgc gatgaccaag atgatgaagt
     1561 gtaccgcact gcaaccgaaa aacatcaggc catcatggcg atgatcaaag actgccaaat
     1621 ccgcaaacag ccggtgctgg tcggtaccgt aagtatcgaa aaatcagaag aaatctctga
     1681 cttgctcaaa aaggacaaga tcaaacatca ggtactgaac gcgcgcttcc acgaacagga
     1741 agctatgatc attgcccagg ctggtgcccc gggctcggtc actattgcca ccaatatggc
     1801 gggacgtggc accgatattc agctcggcgg taatatcgat atgctactca gtcaacagct
     1861 cgaaggcgaa accgacaaaa ctaaacgaac ggagattgaa gcacgtgtac gccaggaagt
     1921 tctcgacggt agagaagtcg tggtcgctgc cggcgggctt tttatcatcg gtaccgaacg
     1981 gcacgaaagc cgccgcattg ataaccaact gcgtggccgt tccggtcgtc aaggcgatcc
     2041 cggcggctca aagttttatt tgtcgcttga agatgatctg atgcggattt ttggctctga
     2101 gcggatggac ggcatgttac agaaactcgg cctcgaagaa ggtgaagcga ttgttcacac
     2161 ttggatcaac aaagcgctcg aaaaagcgca acaaaaggtt gaagcacgca acttcgacat
     2221 tcgtaaaaac ctactcaaat ttgacgatgt tatgaatgac cagcggaaag tcatttatga
     2281 acaacgcaaa gaattgatgg gcagcgaaga cgtctcggtg acgatcatgg acatgcgcca
     2341 caacgtggtt gaaagtgttg ttgcccaatg tattccggaa aaagcctatc aggagcaatg
     2401 ggacacggca gcgctccatg aagaaggctt gcggctgttt ggtcttgatt tgccggtgga
     2461 agactggggc aaggaagagg gcgtcgcgga tgaacaaatc ctcgaacgca ttaacgatgc
     2521 cgctaaccgg aagatggctg aaaaagccgc ctcttggggc ccggtagtca tgcgcgatat
     2581 cgagaaaaac ttattgctcc aagtgctcga ccaagtatgg aaagaacatc tgctggctct
     2641 tgatcatctt cgccagggca ttgggctccg cgcctatgca caaaaagatc cgctcaatga
     2701 atataagggc gaagctttcg acatgttcaa tggcatgctc accgagcttg atgaacggat
     2761 cacgattatt cttgcccata tggaactgca gcttaccgat ccaagcgaat tgggcttgca
     2821 tggcactact gatacgtttg aaatcaccca agacaccgcc gggttcggct acggtgatga
     2881 cctgctgtat ggcgaagctt acgaagaggg tgagtttgac ggcaccggtt taagcgaact
     2941 gccggcctct ccattggtgg tgcgcgaaag tgcggcggtg atcgatcccg aagatccgtc
     3001 gacctggggt aaagttggcc gcaacgcctc ctgcccctgc gattccggta aaaaattcaa
     3061 gcactgccac ggcgcggctt aagggctgtg tccaacaccc gctcaatcgc taacgtctat
     3121 gccggcgtgc cgacaaccga tggggccggg gtcaagctga cccggatgat cggcacgcct
     3181 gaactcgatc aggttgatcc gtttttaatg ctggaccgca tggataccga tgagccggat
     3241 gcctatattg ccggcttccc ggatcacccg catcgcggct tcgagaccgt ttcgatcatg
     3301 ttcgaagggc aaatgcacca ttgggattcg gttggcaatg aaggtgagtt aaaaccaggc
     3361 gacgtgcagt ggatgactgc tgggcgcggg atcatccatt ctgaaattcc ggaaatgctc
     3421 gaagaacggc tgcgcggttt tcagctctgg atcaacctcc cggctaagca taaaatggtc
     3481 gcacccaagt atcaggatat cccagctgat caaattcccg tcgtgacttt cgacggtggt
     3541 tcggtgcggg tcattcgcgg tacctatgag gaattgacgg gacccgctga gtctctcatg
     3601 ccggtgcgag tccttgacgt caatcttact accggcgcgg gttggtcgat ttcgcttgag
     3661 gatggacgca atctgtttct ctgcgttcat gaaggttcgg tcaacagtga tagccgagaa
     3721 gtcgctgccc cctcgatcat cacctttgac ggctacggcg atgtccaggt gacggccgga
     3781 gatagtggcg ccagcattct ttactgcgag ggcacggcgt tgaacgaacc catcgcccgc
     3841 tatggcccgt ttgtcatgaa tactcattcc gagatcaggc aagcggccga agactttaac
     3901 tctgggtttt ttgggaaact ttagcaacat gaacgaaatt gacgatctac cgctggtcaa
     3961 agattttggc cccgaagtca gcctgcgccg gcggcgcatt tggggagtag ggct
//
LOCUS       DASCNL010000190         1114 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000426754, whole genome shotgun sequence.
ACCESSION   DASCNL010000190 DASCNL010000000
VERSION     DASCNL010000190.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000426754"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            25..>1114
                     /gene="mrdA"
                     /locus_tag="QF359_02505"
     CDS             25..>1114
                     /gene="mrdA"
                     /locus_tag="QF359_02505"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HJO85810.1"
                     /translation="MTGDPLLELPGFRIGKAGVEKVHDLALRGKSGTSQVEVNAFGRV
                     IRELEHREGLPGAEAWLAIDMELQKFVTKRLSDEAASAVVMDVHTGEVLALASTPSFD
                     PNAFNRGLSQSEWKALASNSLAPLNNKAISGQYSPGSTFKMVVALAALEKGVVTPKSQ
                     FFCTGELELGDSIFHCWKKTGHGTMDMMSAITQSCDVYFYEIAKRTGIDRISAMARRL
                     GMGQILGIELTGERQGLIPTRAWKKKVKRVSWQQGETLLAGIGQGFILTTPLQLAVMT
                     SRLVNGGKAVVPHLTRQIVPFEAAEPTASEILEFETIGIHPPHLDLIVKAMAAVSNSP
                     YGTAYRSRIKEPGFQLGGKTGTVQVRRIS"
BASE COUNT          266 a          256 c          319 g          273 t
ORIGIN      
        1 gtttcaggcg tatcggaaaa agatttgacc ggagatcctc tgttggaact accaggcttt
       61 cgtattggca aagctggtgt ggaaaaagtt cacgatcttg cgctacgtgg taaaagcggt
      121 accagtcagg ttgaagtcaa tgccttcggc cgcgtcatta gagagcttga gcaccgcgaa
      181 ggtttacccg gcgctgaagc ttggctcgcc attgatatgg agctgcaaaa atttgtcact
      241 aaacgattga gcgacgaagc tgcgtcggcc gtggtgatgg atgttcatac cggagaagtg
      301 ttggctctgg catcgacgcc gagctttgat ccgaacgctt ttaatcgcgg tctgtcgcaa
      361 tctgaatgga aggcgctggc ctcaaactcg ctggcgccgc tcaataataa ggccatcagt
      421 gggcagtatt ccccgggatc gaccttcaag atggtggttg ccttggcggc tttggaaaaa
      481 ggtgtcgtca cgccgaaaag ccaatttttc tgcaccggtg agttagagct cggtgattca
      541 atttttcact gctggaaaaa aacaggtcat ggtacaatgg atatgatgtc agctatcact
      601 caatcctgtg atgtctattt ctatgagatt gccaaacgta ccggtattga tcgcatttcg
      661 gcaatggcac ggcggctggg aatggggcaa attctgggta tagaattgac cggtgagcgg
      721 cagggtttga taccgacacg agcttggaag aaaaaggtca aacgggtttc ctggcaacag
      781 ggtgagacct tgctggcggg tatcggccag ggctttattt taaccacgcc gttgcaactg
      841 gccgtcatga catctcggct ggtaaatggc ggcaaagcgg tggtgcccca tttaacccgg
      901 cagattgtac cttttgaggc agctgaacca acggcatcgg aaatacttga atttgagact
      961 atcggtattc atccgcccca tctcgatcta atagtaaaag cgatggcggc cgtttcgaac
     1021 tcgccctatg gcacggccta tcgctcgcgt atcaaagagc ccggttttca gttgggaggc
     1081 aaaaccggta cggtgcaagt gcgccggata tcta
//
LOCUS       DASCNL010000191         2961 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000427544, whole genome shotgun sequence.
ACCESSION   DASCNL010000191 DASCNL010000000
VERSION     DASCNL010000191.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2961)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2961)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2961
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000427544"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            107..1027
                     /locus_tag="QF359_02510"
     CDS             107..1027
                     /locus_tag="QF359_02510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO85811.1"
                     /translation="MSELVIEQQGQSTWALAWQRFLKHKLAVISGCYLIFVCLLSASA
                     PLFELLWDIDANQANLFNRFALPSAAAWLGLDELGRDVFTRLLYGGQVSLLVGLVTAL
                     VAALFGTVVGLIAGYRGGWVDAILMRLTDSVISLPLLPLLIVLAAIDLNKSSLPEAII
                     QSENISLYRIIFIVAVVGWTTVARLVRGAALSLRERDFVLAAKVQGASAFRIMSVHIL
                     PNLISPIIVATTLSIGNIILLESVLSFLGLGIQPPVASWGNLLTNAQELIFSTPWLAF
                     YPGIAIFITVIAFNFLGDGLQDALDPKAEK"
     gene            1172..2605
                     /locus_tag="QF359_02515"
     CDS             1172..2605
                     /locus_tag="QF359_02515"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HJO85812.1"
                     /translation="MAEATRSNIYPVILSGGTGTRLWPLSRALYPKQLQPLHSDLSLL
                     QETASRLKGEQFAAPLIICNQEHRFIVAEQLHSVEIVPEAIILEPMGRNTAPAAAVAA
                     IILAERDPGAVMLLLPSDHVIQNSAAFQKAIDIALPAAHQGSLVTFGILPTGPETGYG
                     YIKQGSEIADQPSCFAVEAFVEKPDSATAEKFIEEGNYFWNGGIFLFTVAKFMAELER
                     LSPGIAAACRQAVAKSTNDLDYHRLDKAAFATCPADSIDYAVMEKSADVAVVPVDMGW
                     SDVGSWDALWQVLDKDQAGNVTAGDVLLKDTANSLIRSEDKLVAAVGLADTVVIATED
                     AILVSTKEASQNVKLVVDDLKATGRSEHISHAKVYRPWGWYQTLEMRDRFQVKVLSLK
                     PGAKISLQRHRQRAEHWVVVSGIAIVTRGEEIIELEKNQSTYIPIGMKHRLENKAESD
                     LQLIEVQSGDYLGEDDIERFDDQYGRD"
     gene            2605..>2961
                     /locus_tag="QF359_02520"
     CDS             2605..>2961
                     /locus_tag="QF359_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO85813.1"
                     /translation="MTQLSNSLANRDIENFLHPYTNLAAHQETGPLVITKGDGVYVYD
                     EAGNKYIEGLAGLWCTALGFDNKRLVEAATKAMEQLPFYHSFGSKSHPTAIDLAERLI
                     ELAPVPMSKVFFANSGS"
BASE COUNT          664 a          776 c          758 g          763 t
ORIGIN      
        1 tgttcgccac catattgacc ctgcttggta atctccttgc cgatatcgcc tatggctggc
       61 tcgatcccag gatttcctat ggggagagta atgagagttc aggtgcatga gcgagcttgt
      121 tatagaacag caagggcaat caacctgggc attggcgtgg cagcgctttt taaaacataa
      181 attggccgtc attagcggct gctatcttat atttgtgtgt ctcctttcgg catccgcacc
      241 gctgtttgaa ttgctgtggg atattgatgc caatcaggct aatcttttta accgctttgc
      301 cctgcccagt gctgctgcct ggctaggcct ggatgaatta ggccgcgatg tgtttacgcg
      361 gctgctctat ggcggccagg tttctctttt ggtgggccta gtgaccgcac tggtggcggc
      421 acttttcggt acggtagttg gcctgattgc cggctatcgc ggtggctggg tcgatgccat
      481 actgatgcgc ctgaccgata gcgtaatttc actaccgttg ctgcctctgc tcatcgtcct
      541 ggccgcgatt gatctcaata aaagcagcct gcccgaggcc atcattcaat cagagaacat
      601 cagcctctac cggattatct ttatcgtcgc ggtggttggc tggaccaccg tcgcccggct
      661 ggtgcggggt gcggcgctca gtctgcgcga gcgggatttt gtgcttgcag ccaaagtgca
      721 aggtgctagt gcgttcagga ttatgagcgt tcatattctg cccaatctga tctcgccgat
      781 catcgtcgcg acaacactat ccatcggcaa tatcatttta ctggaatcgg ttttaagttt
      841 tctcggtctc ggtattcagc cgccggttgc cagttggggt aatctcctga ccaatgccca
      901 ggagttgatt ttcagtaccc catggctggc tttttatccc ggtatcgcca tttttatcac
      961 ggtcatcgct tttaactttc tcggcgacgg tctgcaggac gcacttgatc caaaagcaga
     1021 aaagtaattt cctatttcgg tgacagttta cttttaaagc ttagcacacc aaaaaagtaa
     1081 actgttaccg aaatacattg ttggctcgga tgatttaatc cgatatttga tgtaacttat
     1141 tgagtgcacg tataattttt tggatacagc tatggctgaa gcgaccagga gcaatattta
     1201 tccggttatt ctttccggtg gtaccggcac ccgcctgtgg ccgctttcgc gcgcccttta
     1261 cccaaagcaa ttgcagcctt tgcattccga cttaagtctt ctgcaagaaa ctgcatcacg
     1321 cctcaaaggt gagcaattcg cggcaccgtt gataatctgc aatcaggaac accgctttat
     1381 cgtcgccgaa caattacaca gcgtcgagat tgtgccggaa gcgattatac tcgagccgat
     1441 gggccgcaac accgcacccg ccgccgctgt tgccgctatt attttggccg aacgggatcc
     1501 cggggcagtt atgttactgt taccctcgga ccacgtcatt caaaattcgg cggcttttca
     1561 gaaagccatc gatatcgccc tgccggcggc gcaccaaggc tcactggtta cttttggtat
     1621 cctgccaacc ggaccagaaa ccggttatgg ctatatcaaa caaggcagcg agattgcgga
     1681 tcaaccaagc tgcttcgcgg tagaggcctt cgttgaaaag cccgacagcg ctacggctga
     1741 aaaattcatc gaagaaggta attatttttg gaatggcggc atttttcttt ttaccgttgc
     1801 taagtttatg gccgagctgg aacgcttgtc acccggtatt gccgccgcct gccggcaagc
     1861 cgtcgccaaa agcaccaatg atctggatta tcatcgcttg gataaagcgg cctttgccac
     1921 ctgccccgcc gactctatcg attatgcggt gatggagaag tctgctgacg ttgcggttgt
     1981 accggtcgat atgggctgga gtgatgtcgg ctcttgggat gcgctctggc aggtgctgga
     2041 taaagaccag gccggcaacg tcaccgctgg tgatgtccta ctcaaagaca ctgcaaactc
     2101 gctcatccgc tctgaagata aattagttgc cgccgtcggc cttgccgata cggttgttat
     2161 agccaccgag gacgccatcc tggtttccac caaagaagcc tctcaaaacg tcaagctcgt
     2221 ggttgatgat ttgaaggcca ccggccggtc agagcatatt tcgcatgcca aagtctaccg
     2281 cccttggggc tggtatcaga cgctcgaaat gcgtgaccgt tttcaggtca aagtattaag
     2341 cctcaagccg ggcgccaaaa tatccttgca gcgccaccgg caaagagccg aacattgggt
     2401 ggtggtttcc ggcatcgcca tcgttacccg tggtgaagaa atcattgaac tcgagaaaaa
     2461 ccaatcaacc tatattccga ttggaatgaa gcaccggctt gaaaacaaag ccgagagcga
     2521 cctgcagctc attgaagtac aatccggtga ctatctcggc gaagatgata tcgaacgctt
     2581 tgacgatcaa tatggacgcg actgatgacc caactatcaa attcactcgc aaatcgcgac
     2641 attgaaaatt tcctgcatcc ctataccaat ttagcggcgc atcaggaaac cggcccgctg
     2701 gtgatcacca agggcgatgg tgtttacgtc tatgatgagg ccggtaataa atatatcgaa
     2761 ggtctggccg gactttggtg cacggctctt ggtttcgaca ataaacgtct cgtcgaggcg
     2821 gcaaccaaag cgatggagca actccccttc taccactcct ttggcagcaa atcccatccg
     2881 acggcgattg acctagcgga acggctgatc gagcttgcgc cggtaccgat gtcgaaggtg
     2941 ttttttgcca attcaggctc g
//
LOCUS       DASCNL010000192         3190 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000431871, whole genome shotgun sequence.
ACCESSION   DASCNL010000192 DASCNL010000000
VERSION     DASCNL010000192.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3190)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3190)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3190
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000431871"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..812)
                     /locus_tag="QF359_02525"
     CDS             complement(<1..812)
                     /locus_tag="QF359_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJO85814.1"
                     /translation="MKLTYFDDYRLGVVDGSDVIDVSDVVQDIPHRDQLDLMAGLIAD
                     FGSYQAKLEKVVSNGEGIPLSSVRIRPPLPRPVNIDCMAVNYMEDGTRDEPAPINAFH
                     KSPSGIIGHEDTMVLQDIPATVFEGEAEIAVMIGKRASNVSAAAAMDYVFGYTNFIDG
                     SARGLQPPGSNFFFLMKSRETYAPIGPYLVTKDEIADPQKLQIKLSVNGEIKQNFNSD
                     DMAHPITRCIEWASSIHTLEPGDILATGTNHRGLSAFHDGDVVELECEGLDVL"
     gene            complement(832..2151)
                     /locus_tag="QF359_02530"
     CDS             complement(832..2151)
                     /locus_tag="QF359_02530"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85815.1"
                     /translation="MKNIRENVGEILDLQLPSSKKEIAQIQSAQKKVALTQAKKAKFY
                     QGRLDHVDPNNLDDPVEWARIPIIDKEKLRELGVENFSELFCIAEQKDIAEYWRSGGA
                     TGVPLYYPRTYTDMYYTYIQLCRCWTVAGLNEDDICHQSFPYGVHPAGQLWSRTANQV
                     GIGVLWAGSGANTPSRIQLELIEDLQPTIWMGMPSYGLHLANLAGEMDIDLAGGNVRK
                     VIVGAEALSAAKREKLERAWGAEVNDFFGMTEIGILGADSKVHEGFHIWTDQALFEVV
                     DEETGLPVPEGEEGLMVITPLFCNTSTPFLRWSSGDIVRISNETSLEGPFSIFPVMRH
                     ANRTVGFAKIRGININHSEFEDFMFRVPEINDFKVEFTATDGLDNLVVSIEVDRKSDA
                     KKIAETLAENIRDVFEVRPVIEILETGTLAKEFEASVKAPRFVDKRA"
     gene            complement(2155..>3190)
                     /locus_tag="QF359_02535"
     CDS             complement(2155..>3190)
                     /locus_tag="QF359_02535"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF005085.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HJO85816.1"
                     /translation="NKAGDIDNAAFDDVKNQCIADIVTFQDSIGMPSVTDGEFRRRVW
                     SGGVSDALEGMGVKEAGTLTFKGEDGDVLMPPSPYADAKLKRKHAIVTDDYKYIKSLN
                     PQGQPKVTMAAPSVMHFFLGSGSYDPAVYGSDEEYFADLTQIYKDEVVELAKAGCTYI
                     QLDDTALPCNCDEEARESIRARGEDPDDLTDTYVKAINDAVSGRPDNMFAGMHMCRGN
                     LKGLWMAAGGYEPIAEKIFNQLKIDAFFMEYDNERSGDFQPLRFLPEGKVAILGLIST
                     KTPELEDKDALKRRIDEAAKNVPLEQLALSPQCGFSSGGGGGQVVTEDDTKRKLELVV
                     EVATEVWGSV"
BASE COUNT          762 a          884 c          729 g          815 t
ORIGIN      
        1 agaacatcta gcccttcgca ttcaagttca accacatcac catcgtggaa cgcgctcagt
       61 ccccggtgat tggtgccagt ggctaagata tcgccgggct ccaaggtgtg aatagagctt
      121 gcccattcga tgcagcgcgt tattggatgg gccatatcat cggaattaaa attttgttta
      181 atttcgccat tgaccgagag tttgatctgt aatttctgcg gatcagcgat ctcatccttg
      241 gtgacgagat agggaccaat cggtgcatag gtttcccgcg atttcatcaa aaagaaaaaa
      301 ttactaccgg gcggctgcag accgcgcgcc gagccatcaa taaaattagt gtaaccaaaa
      361 acgtaatcca ttgctgcagc ggcacttaca tttgatgcgc gtttgccgat cataacggca
      421 atctcagctt caccttcaaa aaccgtcgcc gggatatcct gcaataccat ggtatcttca
      481 tgaccgataa tgccagacgg tgatttatga aaagcattga tcggcgccgg ctcatcgcgg
      541 gtaccgtctt ccatgtaatt gactgccatg cagtcaatat ttactggccg cggcaagggt
      601 gggcgaatgc gaacggaaga aagtgggatc ccttcaccat ttgaaaccac tttctcaagt
      661 ttggcctgat agctgccaaa gtcagctatc aggccggcca tcaggtccaa ttggtcgcgg
      721 tgcggaatat cctgcaccac atcggatacg tcaatcacat cactgccatc aacgacacca
      781 agcctataat catcaaaata cgttagtttc atcaattaat tccttgtttt tttatgctct
      841 tttatcgaca aagcgaggtg ctttgacgct cgcttcaaat tctttcgcca gcgtgccggt
      901 ctccaatatc tcaatcaccg ggcgtacttc aaacacgtcg cggatgtttt cggcgagcgt
      961 ttcggctatc ttctttgcat ccgatttgcg gtcgacttcg atactcacca ccagattatc
     1021 caaaccgtcg gtcgccgtga attccacttt aaaatcattg atttccggca cccggaacat
     1081 aaaatcttca aactccgaat gattgatatt aatgcctctg attttagcga acccgaccgt
     1141 ccggttagca tggcgcatta ccggaaagat cgaaaatggc ccctccagcg aggtttcatt
     1201 tgaaatcctg acgatatcac cggaactcca gcgcagaaac ggcgtcgagg tattgcaaaa
     1261 gagcggcgtg atgaccatca ggccttcttc accttccggc accggcagac cggtttcctc
     1321 atcaacgacc tcaaacaagg cttggtcagt ccagatatgg aagccttcat ggactttact
     1381 gtcagcgcct aaaataccaa tctcggtcat gccaaagaaa tcatttactt cggcgcccca
     1441 agctcgctcc agcttttccc gcttggcggc tgataacgct tcggcgccga caataacttt
     1501 gcgcacattg ccgccggcaa gatcaatatc catttcgcca gccaagttag ccagatgcag
     1561 cccatagctt ggcatgccca tccagatggt cggctggaga tcttcgatta gttcgagctg
     1621 gatacgcgac ggcgtattgg cccctgagcc agcccataag acgccgatgc cgacttgatt
     1681 ggcagtgcgg gaccataatt gcccggccgg atgaacgcca tagggaaacg actggtggca
     1741 aatgtcgtcc tcgttgagtc cggccacggt ccagcagcgg cagagctgaa tataggtgta
     1801 atacatatcc gtgtaggtgc ggggataata gagcggcacg ccggtagcac cccctgagcg
     1861 ccaatattca gcaatatctt tttgctcggc aatacaaaaa agctcgctga aattctctac
     1921 gccaagttcc ctcagcttct ctttatcgat gatcgggatc ctcgcccatt ccaccggatc
     1981 atcgagatta ttcggatcga cgtggtcgag cctaccttga tagaactttg cttttttggc
     2041 ttgggtgagc gcgaccttct tctgcgccga ttggatttgc gcgatttcct ttttcgaaga
     2101 cggcagctgc agatcaagta tctcccccac attttccctg atatttttca tgatttatac
     2161 cgacccccaa acttctgtgg cgacttcgac aacaagctcc agtttgcgct tcgtatcgtc
     2221 ctctgtcacc acttggccgc caccaccacc cgatgaaaag ccgcattggg ggctgagcgc
     2281 cagttgctcc aagggcacgt tcttggccgc ctcatcgata cggcgtttaa gcgcatcttt
     2341 gtcttcaagt tctggcgtct tggtgctgat caagcccagt atggcaacct tgccttccgg
     2401 taaaaatctt aagggctgaa aatcaccaga gcgttcatta tcgtattcca tgaagaacgc
     2461 atcgatttta agctgattaa atattttctc cgcaattggc tcatagcccc ctgccgccat
     2521 ccagaggcct tttaaattac cgcggcacat atgcatgccg gcgaacatgt tgtcgggccg
     2581 gccagatacg gcatcgttga tggctttcac ataggtgtcg gtgaggtcgt ccgggtcttc
     2641 gccgcgtgct cgaatacttt cccgcgcctc ctcatcacag ttacaaggca gcgccgtatc
     2701 atctagctgg atataagtgc aacctgcttt cgccaattcc actacttcat ccttataaat
     2761 ctgggtcaaa tccgcaaaat attcttcatc ggagccataa actgctgggt catagctgcc
     2821 gctacctaag aaaaaatgca tcaccgacgg cgcggccatg gtgaccttag gttggccctg
     2881 aggattgagc gattttatat atttatagtc atcggtgaca atcgcgtgtt tgcgtttaag
     2941 cttagcatca gcataaggcg acggcggcat taatacgtct ccatcctcac ctttaaacgt
     3001 caacgtaccg gcttctttaa ctcccatacc ttccagcgca tcactgacac cacccgacca
     3061 gactcggcgg cgaaactctc catcagtcac cgacggcatg ccgatgctat cctgaaaagt
     3121 cacaatgtcg gcaatgcact ggtttttcac gtcgtcaaaa gcagcgttgt cgatatcgcc
     3181 cgctttgttg
//
LOCUS       DASCNL010000193         1658 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000436075, whole genome shotgun sequence.
ACCESSION   DASCNL010000193 DASCNL010000000
VERSION     DASCNL010000193.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000436075"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(481..1149)
                     /locus_tag="QF359_02540"
     CDS             complement(481..1149)
                     /locus_tag="QF359_02540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO85817.1"
                     /translation="MRTLYHLWLSPFSRKVRLVLAEKDLTFHMEVEQTWERRREFLAL
                     NPTGEVPVLVEPDNTVLADSMAICEYLEEQTPEPNLIGMCPYDRAEVRRLVAWFDQKF
                     NFEVTDKLVNEKVMKRFLGLGEPDSREIRAAQANIHTHLDYIAFLTDRRFWLAGEQMT
                     LADITAAAHISSVDYLGDVPWADYKSAKNWYARIKSRPSFQGILADAIPGLPAPKHYA
                     DPDF"
     gene            1323..>1658
                     /locus_tag="QF359_02545"
     CDS             1323..>1658
                     /locus_tag="QF359_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HJO85818.1"
                     /translation="MPFAQIVILAAVQGITEFLPVSSSGHLILVPKLGGLADQGLLMD
                     VTVHVGTLVAVMLYFWRDMIGMTGALVRSFRQLSNHQKLDYEFWLLVKLVLATLPVIV
                     AGFLVNKYLG"
BASE COUNT          446 a          381 c          375 g          456 t
ORIGIN      
        1 gaaaacccgg ggccaaaaca aaaaagactt tttttactgt ttaccattaa tattaccgct
       61 atcgaattta ttggagtcta acgataagac agtaacataa acagaaccct ctttttactt
      121 ttgatatttt ttactcagcc tatcatggcc agttgaagcg catgagattg atgccaaaaa
      181 agaatatgcc cgctgtatgg gattggcaaa atcgaagccg caaaaaggct ccattcccat
      241 gccattggcg ataagctcat caacacggtc cagcgcgact ataatgatca gagaatcttt
      301 cttctcaaac atcatctcta tgaagtcaca tttatatcgc aagcaagatg atttcatcat
      361 ggttgaatgg gtaacgccgc ttttctgagt tattttgtcg gcacgtcttc gtaacgcatc
      421 atgtgttccc cttgatataa tttaaaagtg acggattgtt accttgaatt gacaaaaaaa
      481 tcaaaaatca ggatcggcat agtgcttggg tgccggcagg ccggggatcg catcagccag
      541 aatgccttga aagcttggcc gtgattttat ccgcgcatac caattcttgg ccgatttata
      601 atctgcccag ggcacatcac cgagataatc gacagatgat atgtgagcgg cagcggtaat
      661 atcggcgagg gtcatctgct cgccggccag ccaaaaccgg cggtcagtca aaaaagcgat
      721 ataatcgaga tgagtgtgga tattggcctg cgctgctcta atctcccgag aatccggctc
      781 acccagccct aaaaaacgct tcatgacttt ttcattgacc agcttgtcag ttacctcaaa
      841 attgaacttt tgatcaaacc aggcgaccag ccgtcgcact tcggcgcggt catagggaca
      901 catgccgatg aggttgggtt ccggcgtttg ttcttcgaga tattcacaaa tcgccatcga
      961 atcggcaagc acggtattat ccggctcgac cagtaccggt acttcaccag ttggattgag
     1021 agccaaaaat tcgcgccggc gttcccaggt ttgctcaacc tccatatgaa aggtgagatc
     1081 tttctcggcc agaacaagtc ttaccttgcg cgaaaaaggc gacagccaaa gatgatagag
     1141 tgtccgcata ggtccttatt atatctctca tcgaataagg taaatagcca accggcagaa
     1201 aggcttattc ttttggaaat ggttgagtta tatgtgctcg tttaataaat aattagcgtt
     1261 cgttctgcta ttccagcaga acaatccaat tcgctgaaat ataaacatag agaattaccg
     1321 acgtgccgtt tgctcaaatt gtcatccttg ccgctgttca aggcattaca gaatttctgc
     1381 cggtctcctc atccggccat cttatcctgg tgccaaaatt aggcggtctg gcggatcaag
     1441 gcttgttgat ggatgtcacc gtccatgttg gtacattggt ggcggttatg ttgtattttt
     1501 ggcgggatat gattggcatg accggagcct tagtccgcag cttccgtcaa ttatcaaatc
     1561 accagaagct tgattatgag ttctggctgt tggtcaaatt ggtgctggca acactaccgg
     1621 ttatcgttgc cggattcttg gtcaacaaat atttaggc
//
LOCUS       DASCNL010000194         2744 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000437474, whole genome shotgun sequence.
ACCESSION   DASCNL010000194 DASCNL010000000
VERSION     DASCNL010000194.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000437474"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="QF359_02550"
     CDS             <1..503
                     /locus_tag="QF359_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJO85819.1"
                     /translation="LKFDCRYLKQYHEVSFVMPNDIVEKRDADAVAKAFHAEHNRLYG
                     YSLDELDVAIEIINVRVQAIGQTDKPVFQEIERVAEDPSAALKGERSVYLPETQEFAE
                     VPIFDGHKLQYGHKVSGPAMIEEVTTAIFVSDSFDCIVDQLGSFVLYRKGREDLVEGT
                     LKGAVA"
     gene            500..2176
                     /locus_tag="QF359_02555"
     CDS             500..2176
                     /locus_tag="QF359_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO85820.1"
                     /translation="MSKVDPILLSVYARTFKAITDEMSISVEKTARSPILCEAKDFVT
                     GLYDGEGNMLEQTENLPILAFSLAPVCKYIIDYFGDDIHEGDAIFHNDVFSMGNQNND
                     VAVYKPIFHEGELVAWTAVKGHQADIGGAVAGGYNPNATEVWQEALRIPPVKVYDKGV
                     LRKDVWELIFANVRLDIVEHDMRAQMGATVIGERRLIALLDKYGVESYQDHKLALFDS
                     TRKMMEAEIEKIPNGTYYGEGYVYYDGHHLGSEFTIRVTIEVKDNHIKFDYSETDDQT
                     NGFVNGTFTSSASATILTLLQMVNPDIPHNEGMVEPIAIIIPEGTLLNASYPKATTFG
                     NHICPPNADAIMKALAPAIPDRITAGWNHLLCSLTAGMDDEKGDRYVDIFFLGQKGGS
                     GGMQGTDGYDHIGMIDASGGVLTQDYEMFEQQTPHVLNLHEYAIDTAGAGQWRGGIGT
                     ETIYTIGSDDTQFVTFGDGDFIPAFGLFEGQDSTLNSIVLTFPDGTEKTPNNKDLWTG
                     VPKGTVYHQFAGGGGGYGDPKKRDREKLTAEIRDGLISEDAAKEIYGLGA"
     gene            2183..>2744
                     /locus_tag="QF359_02560"
     CDS             2183..>2744
                     /locus_tag="QF359_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO85821.1"
                     /translation="MVLHLTDEQIAIRNTFARFTDEQIIPNAEAIDVAHEYPRDIVKQ
                     LADLGFVGMRYPEEVGGSNVDLVTFCLCVEQIARGSMSVAGCISMQSMMGTKFLEMLG
                     NDDIKERLFKPALALGKIGAICMTEPNAGSDLGGLSTSATKVDGGYVLNGNKIWVTAA
                     PLADFFTVFARVGEEKLLSIFLVEKEF"
BASE COUNT          687 a          656 c          719 g          682 t
ORIGIN      
        1 atctcaaatt cgattgccgt tatctcaaac aatatcacga agtttccttc gtcatgccga
       61 acgatatcgt cgaaaaaaga gatgccgacg cggtcgctaa agctttccat gcagaacaca
      121 accggcttta tggctattct ctggacgaac tggacgttgc cattgagatc ataaacgtgc
      181 gagttcaagc catcggtcaa accgacaagc cggtcttcca ggagattgag cgggtcgctg
      241 aagatccttc tgcagcgctc aaaggagagc gttcggtcta tcttccggaa actcaggaat
      301 ttgccgaggt gccgatcttt gacgggcaca aattgcaata cggccacaaa gtgtcgggtc
      361 cggcaatgat cgaggaagta acgacggcaa tttttgtcag cgactcattt gattgcattg
      421 ttgatcagct gggctcgttc gtcctttatc gaaaaggccg ggaagatcta gtcgagggaa
      481 cattaaaggg agcggtagca tgagcaaagt agatcctatc ctgttatcgg tttacgcacg
      541 gacctttaaa gcaatcaccg acgagatgag tatttcggtg gagaaaactg cgcgttctcc
      601 aatcctctgt gaagccaaag actttgttac cggcctttat gatggtgaag gtaatatgct
      661 ggagcaaacc gaaaatctac cgatcctggc gttttcactg gcacccgttt gcaaatacat
      721 tatcgactat ttcggcgacg atattcacga gggtgatgcc attttccata atgatgtgtt
      781 ctcgatgggc aaccaaaaca acgacgtcgc ggtttataaa ccgatcttcc acgaaggcga
      841 gttggtcgct tggaccgccg tcaaaggtca tcaagccgat attggcggcg ctgttgctgg
      901 cggctacaac cccaatgcca cagaagtgtg gcaggaagcg ctacgcattc cgccggttaa
      961 agtttatgac aaaggcgtgc ttcggaaaga tgtctgggag ttgatttttg ccaatgttcg
     1021 gctcgatatt gttgagcacg acatgcgggc gcaaatgggc gcaaccgtta ttggtgagcg
     1081 ccggcttata gcgctgctgg ataaatatgg cgtggagagt taccaggacc acaagctagc
     1141 gctatttgat tcgacccgca aaatgatgga agccgagatc gaaaaaatcc cgaacggtac
     1201 ttattatggt gaaggttatg tttattacga cggccatcat ctgggctcag agtttaccat
     1261 ccgcgtgacc atcgaggtta aggacaatca tatcaaattt gactattcgg aaaccgatga
     1321 tcagacaaac ggctttgtta atggcacctt tacgtcaagt gcgtcagcga caatcctaac
     1381 cctgttacag atggtcaatc cagacattcc acacaatgaa ggtatggttg agccaatcgc
     1441 aatcattatc ccggaaggca ccctcctcaa cgcatcctat ccaaaagcaa caaccttcgg
     1501 taatcacatt tgtccgccga acgctgatgc aattatgaaa gcgctggcac cagccattcc
     1561 ggaccgcatc accgctggct ggaatcacct gttatgctcc ttgactgccg gcatggatga
     1621 tgaaaaaggc gaccgctatg tcgatatctt tttcctcggc caaaaaggcg gctccggcgg
     1681 catgcagggc accgatggtt atgatcatat cggtatgatt gatgcgtccg gcggtgtgtt
     1741 gacgcaggat tatgaaatgt tcgaacagca aaccccgcat gtcttgaacc tgcacgaata
     1801 tgcgattgat accgctggtg ccgggcagtg gcggggtggc attggcaccg agacgatcta
     1861 tacgatcggc tccgatgata cgcaattcgt cactttcggt gatggtgatt tcatcccggc
     1921 ttttggcttg ttcgaagggc aggattcaac cctgaactcg attgtgctga ctttcccgga
     1981 tggcaccgag aaaacgccga acaataagga cttatggacc ggcgtgccga aaggcaccgt
     2041 ttaccatcaa tttgctggtg gtggcggggg ctacggtgat cctaaaaaac gcgatcgtga
     2101 aaaattgacg gcggaaattc gagacggttt gatatccgag gatgccgcca aagaaattta
     2161 tggcctagga gcttgacgca gcatggttct ccaccttact gatgaacaaa ttgccattcg
     2221 caatactttt gcccgtttta ccgacgagca gattatcccc aatgcagaag cgatcgatgt
     2281 cgcccatgaa tacccccgcg acatcgtcaa gcaactggct gatctcggct ttgtcggtat
     2341 gcgctatccg gaagaagttg gtggctccaa tgtcgatctg gtgacatttt gcctctgtgt
     2401 tgagcaaatc gcccggggtt ccatgtcggt ggctggctgt atttccatgc agtcgatgat
     2461 gggcaccaag tttctcgaaa tgctcggtaa tgatgacatt aaggagcgct tgtttaaacc
     2521 tgcgctcgcg ttgggaaaaa ttggcgccat ttgcatgacc gaacccaacg ctggcagtga
     2581 tctcggtggg ctttcgactt cggcgactaa agttgacggc ggctatgtgt taaacggtaa
     2641 taagatttgg gtaacggctg ctccgttggc tgatttcttt accgtctttg cccgcgtcgg
     2701 cgaggaaaaa ctgctttcca tttttctggt cgaaaaagaa tttg
//
LOCUS       DASCNL010000195         1550 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000438528, whole genome shotgun sequence.
ACCESSION   DASCNL010000195 DASCNL010000000
VERSION     DASCNL010000195.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000438528"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..804)
                     /locus_tag="QF359_02565"
     CDS             complement(<1..804)
                     /locus_tag="QF359_02565"
                     /inference="COORDINATES: protein motif:HMM:NF017807.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO85822.1"
                     /translation="MTDDKILQDTHAHPNISMGTAYLIIAITVLLWAIGLIIARDVHD
                     EIPLIGLTFWRWVLAIAVLLPFVIKDVLNNLDIIHQHWRTYFTQGTFMVGGGALLTTS
                     LNFTTAINASLVNSSQPALTALLTWIIMKDRLKGVQYLGIASAIAGLIFMIAKADIAT
                     LLNLNFNIGDLIVVLAILSYSMYAIGLRRLPPGLSTFPTLFVILFFGMFSLLPFYIGE
                     TILVRPVPFTLHTFVIALILAIIVSIASLALWNNGVRVVGPHRAAVFVCL"
     gene            complement(934..1077)
                     /locus_tag="QF359_02570"
     CDS             complement(934..1077)
                     /locus_tag="QF359_02570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85823.1"
                     /translation="MDHPLAALKQPVQLTNPRPEKRAYVWASGFTPSPFEKFSAACRE
                     DDS"
     gene            complement(1153..1353)
                     /locus_tag="QF359_02575"
     CDS             complement(1153..1353)
                     /locus_tag="QF359_02575"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO85824.1"
                     /translation="MTDVVLVGHSYGGMVVTGAADHQFSRADTLIYLDAFLPEDGQSV
                     MDLQPPDRFVYYNEIAKEKGDG"
     gene            complement(1364..>1550)
                     /locus_tag="QF359_02580"
     CDS             complement(1364..>1550)
                     /locus_tag="QF359_02580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO85825.1"
                     /translation="NVVLVHGMRAGGWLWHEVTDQICNAEHEVFTLTLTGLGVRAHLL
                     TADINLETHIMDILKRY"
BASE COUNT          448 a          384 c          371 g          347 t
ORIGIN      
        1 caggcagaca aacaccgctg cccggtgggg gccgactaca cgaacaccgt tattccacaa
       61 agccagtgag gcaatcgaaa cgatgatcgc caatatcagc gcgataacga acgtatgcag
      121 ggtaaacggc actgggcgga ctaaaattgt ttcgccgatg taaaagggca gtagagaaaa
      181 cataccaaaa aataaaataa caaaaagcgt tggaaacgtg cttagcccag gcggaagtct
      241 acgcaggcca atcgcataca tcgaatagga taggatggct aaaacgacaa tcaagtcacc
      301 aatattaaaa ttaaggttta gcagggtagc gatatccgcc ttggcaatca taaaaatcaa
      361 accggcaatt gctgaggcta tgccaagata ctgaactcct tttagccggt ctttcatgat
      421 tatccaggtc aacagtgcgg tcagagccgg ctgcgacgag ttgaccaaag aagcgtttat
      481 tgcggtggta aaatttagtg aggtggttag aagtgcgccg ccaccgacca tgaatgtgcc
      541 ttgcgtgaaa taagtccgcc aatgttggtg aataatgtcc aaattattca acacatcttt
      601 aataacaaaa ggcagcagaa cggcaatcgc cagaacccag cgccaaaagg tcaggccaat
      661 aagcggaatt tcatcatgca cgtcccgcgc aataattaag ccgattgccc acagcagcac
      721 cgttatcgca attatcagat aggcggtgcc catgctgatg ttgggatggg cgtgtgtatc
      781 ttgcaaaatt ttatcgtcag tcatgacggc taatctatag aacgagacac ttcaagtcac
      841 gctgccatac tgtgacaatt tctgtaattt ttaggccacc tcaaccggat gagacatcat
      901 catttgatgg ccgctatcaa tttcccggta gcgctagctg tcatcttccc ggcaggcagc
      961 agagaatttc tcaaacggac ttggcgtaaa gcccgaggcc cagacatagg cccgtttttc
     1021 aggccgcgga ttagtcagtt gaaccggctg cttgagggcg gccagcgggt gatccacttt
     1081 gcgccggtca aattaagcaa tgtcttcaga atcggtaagt ttttagaact ctgccggtgg
     1141 cgtcgggatg cgctagccat cgcctttttc cttggcaatt tcgttataat agacgaagcg
     1201 atccggtggc tgaagatcca tcaccgattg accatcttcc ggcaaaaagg catccaaata
     1261 aatcagcgta tcagctctgg aaaattggtg atccgcagca ccagtgacca ccatgccacc
     1321 ataactgtgc ccaaccaata cgacatcggt caattcttca cagtcaataa cgcttgagta
     1381 tatccatgat gtgggtttca aggttgatat cagccgtcaa taaatgcgcc cgcacgccaa
     1441 gcccggtcaa agtcagggtg aaaacttcat gctcggcatt gcagatttga tcggtaacct
     1501 cgtgccacag ccagccgcct gctctcatgc catgaacgag cacaacatta
//
LOCUS       DASCNL010000196         1142 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000438883, whole genome shotgun sequence.
ACCESSION   DASCNL010000196 DASCNL010000000
VERSION     DASCNL010000196.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000438883"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="QF359_02585"
     CDS             <1..346
                     /locus_tag="QF359_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006559096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85826.1"
                     /translation="NRLPNSSRRELHQNRALHTSEGRTPADNATTRSVPDKAIKEMLA
                     YPMSNGRNFDEILRLLESCQLTAEHQVALGWKAVLPSSIETISPARIVTEDATVSASS
                     MVWILPFSRTSS"
     gene            complement(355..708)
                     /locus_tag="QF359_02590"
     CDS             complement(355..708)
                     /locus_tag="QF359_02590"
                     /inference="COORDINATES: protein motif:HMM:NF025479.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HJO85827.1"
                     /translation="MSQNKKYLLVASMDVTPEKEELFNEVYDIEHIPGILKVPGVLSV
                     ERYKVAPMKMNFSGTVQDMDHSAEPAYTAIYEIESPAVLESEEWGIAVDAGRWPVEIR
                     PHTSNRQFALRKLMG"
     gene            complement(781..>1142)
                     /locus_tag="QF359_02595"
     CDS             complement(781..>1142)
                     /locus_tag="QF359_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85828.1"
                     /translation="TDDEEFRDHIANRARELLAVVTSGKGLEVEPEPADPSLEVLHDV
                     FDVLYGDFNLDWRGKEPAGEKPYFTIPMVSRAKGKTTTRFVSRQYFESTSRFGEETAL
                     KDDQREAPFVGCASGSL"
BASE COUNT          274 a          311 c          262 g          295 t
ORIGIN      
        1 aaaccgactg ccgaactcct ctaggcggga actgcatcaa aatcgtgctc tgcatacatc
       61 agaaggccgg acacctgctg ataacgcaac aacgcggtcg gtcccggaca aagcgatcaa
      121 ggagatgctg gcctatccaa tgagcaatgg ccgtaacttt gatgaaatct tgcgcttgct
      181 ggaatcctgc cagctgacag ccgaacatca ggtggcgctg ggatggaaag ctgtgttacc
      241 ttcatcgatt gaaacgatta gtcctgctcg aatagtaacg gaagacgcca ccgtatcggc
      301 ttcatccatg gtatggattt taccgttcag caggaccagc tcataagaca taaattagcc
      361 cattagcttt ctaagcgcga attgccggtt cgatgtgtgg gggcggattt caaccggcca
      421 gcggccggca tcaacggcga tgccccattc ttcgctttcc agcaccgctg ggctttcaat
      481 ctcatagatc gccgtatagg ccggctcggc ggaatggtcc atatcctgta ccgtgccgct
      541 aaaattcatt ttcatgggtg cgaccttgta gcgttccaca ctcaaaacgc ccggtacttt
      601 taatattccc ggaatgtgtt cgatatcgta aacctcgttg aacaattctt ctttttccgg
      661 cgttacatcc atgctggcaa ccagcaagta ttttttattt tgtgacatca aatcctctct
      721 ggttaaattt actgagcgac gtgctcttgc ttttcgggaa agccgcctcg cttaatctat
      781 tcatagagat cccgaagcgc atccgacaaa gggcgcttcc cgctgatcat ctttgagagc
      841 ggtctcttca ccgaaccggc tggttgactc aaaatattgt cttgagacaa agcgcgtcgt
      901 ggttttacct ttagcccggc tgaccatcgg gatggtgaaa taaggttttt cgccagctgg
      961 ctccttaccc cgccaatcca aattaaaatc gccgtaaagc acatcaaaca catcatggag
     1021 cacttctaaa ctgggatcag cgggttctgg ttctacttcc agccctttac ccgaagtcac
     1081 aaccgccagc agttcccttg cccgattggc aatatgatcg cgaaactctt catcatcagt
     1141 tt
//
LOCUS       DASCNL010000197         1775 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000440126, whole genome shotgun sequence.
ACCESSION   DASCNL010000197 DASCNL010000000
VERSION     DASCNL010000197.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000440126"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /gene="ychF"
                     /locus_tag="QF359_02600"
     CDS             <1..991
                     /gene="ychF"
                     /locus_tag="QF359_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HJO85829.1"
                     /translation="IEPNTGRVSVPDSRLDEIGEIAKSAQIVPTYIEFVDIAGLVKGA
                     SQGEGLGNQFLANIRETDAILHALRCFEDADVTHVDESIDPIRDAETVETELMLADLE
                     SLEKRIESLTKKARGNDKDAIQQLDIIERVLVVLREGRSARMVNIPADDQRLFQMLQL
                     LTSKPVLYVCNVDEGDAATGNDHTERVAEYAKENGAGSIVISAKIESEVVQLTDEAER
                     QEFLAALGLEETGLARLIRAGYQLLGLITYFTANPKEARAWTVVTNTKAPAAAGVIHT
                     DFEKGFICAETITCDDFTVLGGELPCKDAGKIRQEGRDYTVKDGDVILFRFNV"
     gene            1355..>1775
                     /locus_tag="QF359_02605"
     CDS             1355..>1775
                     /locus_tag="QF359_02605"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJO85830.1"
                     /translation="MSDKDVVLVEREGAVATVILNRPEKLNALTKEMWGRVGEAFREL
                     DQDGSLRCIIFRGAGDEAVGPGADISEFATERNNAEQAAEYGALMHASMHAIRDCRHP
                     VIARIRGLCVGGAMELALMCDMRICGEGSKFGVPINCL"
BASE COUNT          444 a          412 c          510 g          409 t
ORIGIN      
        1 catcgaaccc aataccggcc gggtcagcgt gcccgacagc cgcttggatg aaatcggcga
       61 aatcgccaaa tccgcccaga tcgtgccgac ctatatcgaa tttgttgata ttgctgggct
      121 ggttaaaggc gccagccaag gtgaaggact cggcaatcag tttttggcaa atattaggga
      181 aaccgatgcg atcctccatg cgctacggtg ttttgaagac gccgatgtga cccatgttga
      241 cgaaagcatt gatccgatcc gcgatgcaga gacggttgag acagaactga tgttggctga
      301 tttggaaagc ctggaaaaac gcattgagtc gctgactaaa aaagctcgtg gcaacgataa
      361 agatgcgatc cagcagcttg atatcattga gcgcgtgttg gtagttttgc gggagggcag
      421 atcagcccgg atggtcaata ttcctgctga cgatcagcgc ttgtttcaaa tgctgcaatt
      481 gctgacatcg aagccagtgc tctatgtttg caatgttgat gaaggcgatg ccgccactgg
      541 caatgaccat accgagcgcg tcgctgaata cgccaaagaa aatggtgctg gttcaatcgt
      601 tatctcggcc aagatcgagt ccgaagttgt tcagctgacc gatgaagccg aacgccagga
      661 atttctggca gctttggggc tcgaagaaac cggtctggcg cgtttgatcc gggcgggcta
      721 tcagctgttg ggtttgatta cctattttac cgctaacccc aaagaagccc gcgcctggac
      781 ggttgtgacc aacaccaaag cacctgctgc tgccggcgta attcatacgg atttcgagaa
      841 aggcttcatc tgcgccgaga ccattacctg tgatgatttt actgttcttg gcggtgagtt
      901 gccgtgcaaa gacgccggca aaatacgcca ggaaggccgc gactacaccg tcaaagacgg
      961 tgatgttatt ctgttcagat ttaacgtcta attgcgaatc gctgcgacta cggtaccggg
     1021 tacacttttt ctaaaaaata tttgtccaca acatggcgac ggtgaagaac agcaaaatcg
     1081 tgccggtaat tcaggaaacg cctttttgta cagttggcgt acccagccat ggttggcatg
     1141 ccaatgcggt ttcccgaact catggtgtag tggataataa taatggtatc aggaccgggc
     1201 gacagcacaa tggcggcaac taaaaaagcg gtaaggacgg aaagttagag aggcataatg
     1261 aggaggaagt aggcggcgaa gccagagatg tcaatattat tgcacctttc aacttcatcc
     1321 tccataacat tgctgacata ttgggaagaa aaagatgtca gataaagatg tcgttttagt
     1381 cgagcgtgag ggtgcggttg caacggtgat cttaaaccgg ccggaaaagc ttaacgcgct
     1441 gacgaaagaa atgtggggcc gcgtgggtga agcgttccgc gagcttgatc aggatggcag
     1501 cctccgctgc attattttca gaggggccgg cgacgaggcg gtcggccccg gtgccgatat
     1561 ttccgagttt gccacggagc gcaataatgc cgaacaggcg gcagaatatg gtgcgctgat
     1621 gcacgcttcc atgcatgcca ttcgcgattg ccgccatccg gtgatcgcgc gtattcgggg
     1681 actctgtgtc ggcggtgcga tggaactcgc gctgatgtgc gatatgcgaa tttgcggaga
     1741 aggttccaaa ttcggcgtgc ccatcaattg tttgg
//
LOCUS       DASCNL010000198         1142 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000445392, whole genome shotgun sequence.
ACCESSION   DASCNL010000198 DASCNL010000000
VERSION     DASCNL010000198.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000445392"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            86..>1142
                     /locus_tag="QF359_02610"
     CDS             86..>1142
                     /locus_tag="QF359_02610"
                     /inference="COORDINATES: protein motif:HMM:NF013132.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HJO85831.1"
                     /translation="MSIMAPKISDLQNGEGVGAKIANLLSDFSVHYLWEKKWFFIAMI
                     VGAAMLSLPTPDGLSPEAWIVLTMSLVATILFVTEPIPLPAVALLIILGQVFLLGSAS
                     SDVAKTLWNDSVLFILGSLMLAVAVVKQKLDKRIAWIIVRMTGTKTSRICFGISVVSG
                     LLASFIGEHTVAAMMLPVGITLVTLTSDDPKKVRNLAAVLLFSIAYGASVAGIGTPSG
                     GARNAIMIGYWREFFYDPTNPETQRFIIDYVRWMMFAYPMFLVQLPFVTLILFLTFRP
                     EYRDLSRAVVKLRAQVESEGPMKAANWISILLFVLVLIGWIFVSDKVGMGTIAILGAT
                     AFLVGGLVRWEDINSGVN"
BASE COUNT          242 a          234 c          302 g          364 t
ORIGIN      
        1 gaataatttt tttattgcat ggaatttcat gcattaatta tttttcatag aataagcccc
       61 gattattggg gtgggtaata agactatgag tattatggct ccaaaaataa gcgatctcca
      121 aaatggtgaa ggtgttggcg cgaaaatagc caatctcctt tctgattttt ctgttcacta
      181 tctatgggag aaaaagtggt ttttcattgc catgattgtt ggggcggcca tgttgagcct
      241 gccgacaccg gacggattaa gcccggaggc ttggatagtg ctgacgatgt ctttggtggc
      301 gacgatcctg tttgttaccg agcctattcc tctcccggca gtggcgctgc tgattatttt
      361 ggggcaggtg tttttgctcg ggagcgcatc ctcggatgtt gctaaaacat tgtggaacga
      421 ttccgtttta ttcattttag gctctctgat gttagccgtt gcggtggtga agcaaaaact
      481 cgataaacgt atcgcctgga ttattgtcag gatgaccggc actaaaacgt cacgaatttg
      541 ttttggtatt tctgtcgtct ctggcctgct agcatctttc attggtgaac ataccgtggc
      601 cgcaatgatg ttgccggttg gcatcacgct ggtgacgctg acatccgacg atcccaagaa
      661 agttcgaaat cttgctgctg tactgttgtt ctcaattgcc tatggtgctt cggttgcagg
      721 tatcggcacg ccttctggtg gagcgcgtaa tgccattatg atcggctatt ggcgggagtt
      781 tttctacgat cccactaatc cagaaacaca gcgatttatc atcgattatg tgcgttggat
      841 gatgtttgcc tatccgatgt ttctagtcca attaccgttt gtgacgctga tcctgttctt
      901 aaccttccgg cccgaatatc gtgatttatc gcgcgccgtg gttaaattgc gggcgcaggt
      961 tgaaagtgaa gggccgatga aagcggcaaa ttggatttca atcctgttgt ttgtgctggt
     1021 tcttatcggc tggatatttg tgtccgacaa agtgggcatg ggcacaatag ctattcttgg
     1081 tgccaccgct ttcctggttg gtgggctggt gcgttgggaa gatatcaatt ccggtgttaa
     1141 ct
//
LOCUS       DASCNL010000199         1004 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000445800, whole genome shotgun sequence.
ACCESSION   DASCNL010000199 DASCNL010000000
VERSION     DASCNL010000199.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000445800"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="QF359_02615"
     CDS             <1..641
                     /locus_tag="QF359_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85832.1"
                     /translation="GTGRIRKNLRQAKNLLQQAGWVIKNKLLVNPKTSKPLKFEILLI
                     SPAFERIVLPFVRNLKRLGIIASVRTVDTAQYRKRLDTYDFDMIVGTFGQSLSPGNEQ
                     MSFWGSAAAERTGGRNWIGIKNPAIDKLIDLVIAAPNRESLITRTRALDRVLLWNHYI
                     IPQWHIQSFRVAFWDKFGRPAKSPKYGLGFNTWWVDATKAKALASKLTSAKK"
     gene            700..>1004
                     /locus_tag="QF359_02620"
     CDS             700..>1004
                     /locus_tag="QF359_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973052.1"
                     /note="with YejAEF is involved in resistance to microcin
                     C; Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin ABC transporter permease"
                     /protein_id="HJO85833.1"
                     /translation="MLAYIIRRLLLIIPTLFGIMVINFAVVQFAPGGPVEQAISQIQG
                     TAVDATARVSGSGQAETTPGAQKPGIGSGSAASKYRGARGLDPEFIKELEKLYGFDKP
                     "
BASE COUNT          250 a          275 c          252 g          227 t
ORIGIN      
        1 atggcaccgg gcgcatccgt aaaaatctgc gccaagccaa aaatctgttg caacaggccg
       61 gctgggtgat caaaaacaag ctgttggtta atccaaaaac cagcaaaccc ttaaagtttg
      121 aaattctcct gatctcaccg gccttcgagc gcatcgtact gccttttgtg cgtaatttga
      181 aacgcctcgg tatcattgcc agcgtacgta ccgtcgatac cgcgcaatac cgtaagcgtc
      241 ttgatactta cgattttgat atgattgtcg gcacgtttgg ccaatccttg tcgcccggta
      301 atgagcaaat gagtttctgg ggcagcgcgg cggcagaacg caccggcggg cgcaattgga
      361 tcggtattaa gaatccggcc atcgataagc tgatcgattt ggtgatagca gcccccaacc
      421 gcgaaagctt gatcacccgc acccgtgcgc tcgacagagt actcttgtgg aaccactaca
      481 ttatcccgca gtggcacatc caatccttcc gcgtggcatt ttgggataag ttcggccggc
      541 cggccaaatc acctaaatat ggtcttgggt tcaacacttg gtgggttgat gccaccaaag
      601 ccaaagcact cgcttccaaa ctcaccagtg caaaaaaata ggcaaatatt acaagtattt
      661 aagttgacgt tgagcctagt ctcgaaggat aagtaggcca tgctcgctta tatcatccgc
      721 cgcctgttac taatcatccc caccttgttt gggatcatgg tgatcaattt cgcggtcgtg
      781 caatttgccc cgggcggtcc agtcgagcag gcgatctcac aaattcaagg caccgccgtt
      841 gatgccacgg ccagggtttc cggctccggt caggccgaaa cgacgccggg cgcccaaaaa
      901 ccaggtatcg gtagcggcag tgcggcaagt aaatatcgcg gtgcccgcgg gcttgacccc
      961 gagttcataa aggaacttga gaaactctac ggcttcgata aacc
//
LOCUS       DASCNL010000200         2221 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000449940, whole genome shotgun sequence.
ACCESSION   DASCNL010000200 DASCNL010000000
VERSION     DASCNL010000200.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000449940"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>2221
                     /locus_tag="QF359_02625"
     CDS             <1..>2221
                     /locus_tag="QF359_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO85834.1"
                     /translation="KDEMVFVEKVSEWLADPEANEEALELATNYAGWALRTREGREKH
                     ADGHLFKLPGTLDFERLVPAEMDTTSDYTVHKLPDKRLHRREGFKLTDHGMDLKGALS
                     EVHYCIYCHNQGKDSCANGLKAKSKDGAKVPFNESPFGVALTGCPLGARISEMNVLKA
                     QGSAIGSLAALIVENPMTAGTGHRICNECMKACVYQKQDPVDIPEIETRVLKDVLALP
                     YGFEIYSLLTRWNPLNLARPLPLPRTGHRVLVAGMGPAGYTLAHHLMNDGHTVVGIDG
                     LKMEPLSSDLSGVDAMGERVPFKPIRDIQELEESLDDRIMAGFGGVAEYGITVRWDKN
                     FLKIIRLLVERRRQFAMFGAVRFGSTLTVNNAFERGFDHVALALGAGRPTIIPIPRGL
                     VRGVRAASDFLMALQLTGAAKTESIANMQLRLPAIVIGGGLTAIDTATEALAYYPVQV
                     EKFLTRYETLVEERGEAQIRAAWDEEEGLIADEFIGHAKAIRAERAVAEMEERAPHIL
                     ELLKKWGGVTIAYRKRLMDSPSYTLNHEEVDKALEEGIYIAECLSPITALVDKFGHVS
                     HLTLNKQRLTRDGTWLTLDNVEKLPARAVLIAAGTQPNTVLAREDENRFELDGRYFQA
                     YDMDGNEVVPERVKKPEEVHVMAHLEEDGRAVSFFGDLHPSFAGNVVSAMASALQGYP
                     VISQMLASKAPASSKDDDTFIAALNNELRAVVHKVERLTDNIIEIVVRAPQAARQFQP
                     "
BASE COUNT          538 a          588 c          596 g          499 t
ORIGIN      
        1 caaaagatga gatggtcttt gttgaaaaag tctccgaatg gctggcggat ccggaagcaa
       61 atgaagaagc cctggaactg gccacaaatt atgctggttg ggcgctcagg acgcgggaag
      121 ggcgggaaaa acacgccgat gggcatttgt ttaaattgcc cggcacactg gatttcgaac
      181 gcctggttcc ggctgaaatg gacacgacct ccgactacac cgttcataaa ttaccagaca
      241 aacgcctgca tcgccgcgaa ggatttaaac ttaccgatca tggcatggat ttaaaagggg
      301 cgctctccga ggtccactac tgcatttact gccacaatca aggcaaagat tcttgtgcca
      361 atggtctaaa agcaaagagc aaagacggcg caaaagtacc gttcaatgaa agcccgttcg
      421 gcgttgctct taccggctgt ccgctcggcg cccgtatttc agagatgaat gttttaaaag
      481 cccaaggcag cgccattggc tcactggccg ctttgatcgt agaaaatccg atgaccgccg
      541 gtaccggcca ccggatttgc aacgagtgta tgaaagcatg cgtttaccaa aaacaggatc
      601 ccgtggatat ccccgagatt gaaacccgcg tccttaaaga tgtcctggcg ctgccctacg
      661 gatttgaaat ctacagcctt ttaacccgtt ggaatcccct gaatttagcg cggcccttac
      721 cgcttccccg caccggtcac cgcgtcttgg tcgctggcat gggacctgcc ggttataccc
      781 tggcgcatca tttgatgaat gacggccata cggtcgtcgg tattgatggt cttaaaatgg
      841 agccattgtc cagcgatctc tcaggcgtcg atgcaatggg tgaacgcgtg ccgtttaagc
      901 cgatcagaga tatccaggaa ctggaagaat cgctcgatga ccgcattatg gcgggctttg
      961 gcggtgttgc cgaatacggt attacggttc gttgggataa gaattttctt aaaattattc
     1021 ggctgctcgt cgagcgtcga cgccaattcg ccatgtttgg tgccgtgcgc tttggcagca
     1081 ccctaactgt caataatgct tttgagcgag gctttgacca tgtcgctctc gccttaggtg
     1141 ccgggcggcc aacgatcatc ccgatacccc gtggactggt acgcggcgtg cgcgctgcat
     1201 cagacttcct gatggcattg caattaaccg gtgccgctaa gaccgaatcc atcgccaata
     1261 tgcaacttcg attgccggca atcgtcatcg gtggcggctt gacggctatc gacacggcaa
     1321 cagaagcgct ggcctattat ccggtgcagg tggaaaaatt cctcacccgc tatgaaactt
     1381 tggttgagga acgcggcgaa gctcaaatcc gtgctgcctg ggacgaggaa gaaggtttga
     1441 tcgctgacga attcattggt cacgccaaag caatccgagc cgagcgcgcg gtcgccgaaa
     1501 tggaggagcg cgccccgcat atccttgagc tcttgaaaaa atggggtggg gtcactatcg
     1561 cctatcgcaa acgcttgatg gatagcccca gctacacgct caaccatgaa gaagttgata
     1621 aagcgctgga ggaaggtatc tacatcgctg aatgcctatc accgattacc gccttggtcg
     1681 acaaatttgg ccatgtcagc cacctcacgc tcaacaaaca acggctaacc cgggatggta
     1741 cttggttgac gctggacaat gttgaaaagc ttcccgccag agccgtcctg atcgctgccg
     1801 gcacccagcc caatactgta ttggcccgcg aagatgaaaa ccgcttcgaa ctcgatggcc
     1861 gctatttcca ggcctatgat atggacggca atgaggttgt gccggaacgg gttaaaaaac
     1921 cggaagaagt tcatgtcatg gcgcatctcg aagaagatgg ccgcgcggtt agcttttttg
     1981 gtgatttgca tccttccttt gccggtaatg tagtcagtgc catggcgagc gcgctacaag
     2041 gctatcccgt catcagtcaa atgctcgcca gcaaagcacc ggccagcagc aaagatgatg
     2101 atactttcat cgctgcgctt aataacgaat tgagagccgt tgtccataag gttgagcgac
     2161 tgaccgataa tattatcgaa attgttgtgc gggccccgca agcggcccgc cagttccagc
     2221 c
//
LOCUS       DASCNL010000201         1234 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000451371, whole genome shotgun sequence.
ACCESSION   DASCNL010000201 DASCNL010000000
VERSION     DASCNL010000201.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000451371"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="QF359_02630"
     CDS             <1..416
                     /locus_tag="QF359_02630"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006235 - dTTP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HJO85835.1"
                     /translation="PTLNKGQWVLTDRYADSTMAYQGYGHGVSKKAIHGFYQFIAGNK
                     QPDLTIILDLPAAEGLARADMRANEKAIKIQQKEDRYERMGLEFHSRLRDGFLDIARK
                     NKKRCMVIDATKSIEEIQTNIRKLVFKRFRLAADE"
     gene            409..>1234
                     /locus_tag="QF359_02635"
     CDS             409..>1234
                     /locus_tag="QF359_02635"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HJO85836.1"
                     /translation="MSDQELEDGPPVANANAILQGQSEAETSFLSAFNSGKLPHAWLI
                     CGPNGIGKATLAHRIARFVLTHGGPVDDGPGLFGDALPQADLISLATDLANPVCRRII
                     AGGHADFLHIQRSKDEKTGKLRKEITVDEVRAVVSFLSMTPAEGGWRIVVIDSADEMN
                     ANAANAVLKVLEEPPARALLLLVSHNPGRLLPTIRSRCRRLVLKPLPERTIADLLVEC
                     DPDILPEDAAELAQIADGSIGRALHLANEGGLEVYREISGILESLPQLDIPRLHKLG"
BASE COUNT          313 a          293 c          332 g          296 t
ORIGIN      
        1 taccaacgct taataagggg cagtgggtgc tgaccgaccg ctacgctgac tcgaccatgg
       61 cttatcaagg ttatggccat ggcgttagca agaaagccat ccacggcttc tatcaattca
      121 ttgccggtaa taagcagcct gatctaacaa taattcttga tttaccggca gcagaaggat
      181 tggcgcgtgc tgatatgcgg gctaatgaaa aagccattaa gatacagcaa aaagaagatc
      241 gctacgaacg tatgggatta gaatttcact cccggctgcg tgatggtttt ttggatattg
      301 cccgcaaaaa caaaaaacgc tgtatggtga ttgatgcaac caagtcaatt gaagaaattc
      361 agactaatat cagaaaatta gtgttcaaaa gatttaggct tgctgccgat gagtgatcaa
      421 gaactcgaag atggtccacc tgtcgcgaat gccaacgcaa ttttgcaggg ccaatctgag
      481 gctgagacca gctttttatc cgccttcaat tccggcaagt taccgcatgc ttggctgatc
      541 tgtggcccca atggtattgg taaagccacc cttgctcatc gcattgcccg gtttgtactg
      601 acccatggtg ggccggtaga tgacgggccc ggactattcg gagatgcctt gccacaagcc
      661 gatctaatca gtctggcaac tgatctcgcg aatccggtgt gccgtaggat cattgccggt
      721 ggccacgcag atttcttgca cattcagcgc agcaaagatg aaaaaaccgg caagctcaga
      781 aaagaaatca cggtcgatga agtgagagcg gttgtctcgt tcctgtcgat gacaccggcc
      841 gaaggcggct ggcgtatcgt tgttattgat agtgctgacg aaatgaacgc caatgctgcc
      901 aatgcggttt taaaagtgct ggaagaaccg cccgcgcggg cgctgctatt actggtgagc
      961 cataaccccg gccgattgtt gccaacgatc cgttcacgct gccgccgctt ggtcttgaag
     1021 ccgttgcctg agcggacaat tgctgatttg ttggtggagt gcgatcctga tattttaccc
     1081 gaggatgctg ccgaactcgc gcaaattgcc gatggcagta tcggccgggc gctgcatttg
     1141 gcaaatgaag gaggattgga ggtttaccgc gagataagcg gtattcttga atccctgccg
     1201 caattggata tcccgcggct ccataaatta ggag
//
LOCUS       DASCNL010000202         1788 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000455573, whole genome shotgun sequence.
ACCESSION   DASCNL010000202 DASCNL010000000
VERSION     DASCNL010000202.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000455573"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..174
                     /gene="rpsN"
                     /locus_tag="QF359_02640"
                     /pseudo
     CDS             1..174
                     /gene="rpsN"
                     /locus_tag="QF359_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385491.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
     gene            190..588
                     /gene="rpsH"
                     /locus_tag="QF359_02645"
     CDS             190..588
                     /gene="rpsH"
                     /locus_tag="QF359_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HJO85837.1"
                     /translation="MSMSDPVADLLTRIRNGQRAKKSSIQTPASKLRANVLDVLKREG
                     YIRDYSQGNIRKGVDEITIELKYFDGEPVIKEINRVSSPGCRIYSKIKDLPRIYNGLG
                     IAILSTPRGVMSDAEARAANVGGEVLCHVF"
     gene            606..1139
                     /gene="rplF"
                     /locus_tag="QF359_02650"
     CDS             606..1139
                     /gene="rplF"
                     /locus_tag="QF359_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HJO85838.1"
                     /translation="MSRVGLTPVVIPDGVTVDLTDKVMTAKGKQGELNLTFVDDVVPS
                     LEEGLLWIKPANDTMKARKLWGTFRSLAGNVVHGVSEGYTKDLQVSGVGYRAQVQGKD
                     LVLQLGYSHEIRHPIPKSIKITCETQNDISIFGADKQMVGSVAAKIRSYRPPEPYKGK
                     GIKYKDEQILRKEGKKK"
     gene            1143..1505
                     /gene="rplR"
                     /locus_tag="QF359_02655"
     CDS             1143..1505
                     /gene="rplR"
                     /locus_tag="QF359_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HJO85839.1"
                     /translation="MKTTKQLFKRRVQRTRGKVKKNNSGRPRLAVFRSGKHIYAQVID
                     DASGATVASASSIDKDVRGKLKNGANIDAATEVGKIVAERAKKAGVETVVFDRGGYLY
                     HGRVKALAKAAREGGLSF"
     gene            1518..>1788
                     /locus_tag="QF359_02660"
     CDS             1518..>1788
                     /locus_tag="QF359_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009868550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HJO85840.1"
                     /translation="MAQEPNTQDPNKGRGGQRGGRGGRRGQRGDRPERGDRDGDELID
                     KLVGINRVAKVVKGGRRFGFAALVVVGDGRGRVGFGSGKAREVPEA"
BASE COUNT          464 a          383 c          506 g          435 t
ORIGIN      
        1 caattgaaat tggcaaaatt accgcgcaat tcttctaaat agcgcatcat gttgcgctgc
       61 gaaatatccg gtcgtggccg cagtaactat cgcaaattcc gcatgtcgcg aattgcgtta
      121 cgtcaattag cctcgcacgg gaaaatcccg ggtatggtta agtcgagctg gtaagggagg
      181 aacgcatata tgtctatgag tgatcccgtt gcggatttat taaccagaat tcggaatggc
      241 caacgtgcca agaagagctc tatccaaacg ccggcttcca aactccgggc gaatgtcctg
      301 gatgttttga aacgggaagg ctatatccgc gattattcac aaggtaatat ccgcaaaggc
      361 gtcgatgaaa ttaccatcga actgaaatac ttcgatggcg agccggtgat taaagagatc
      421 aaccgtgtgt cctcaccggg ctgccggata tattccaaaa tcaaagactt gccgcgcatc
      481 tataacggct tgggaatcgc tatcttgtcg acccctcgcg gagtgatgtc ggacgccgaa
      541 gcgcgtgctg ccaatgttgg tggcgaagtt ttgtgccacg tattctaggt tggggaggca
      601 cagcaatgtc acgtgtagga ttaacaccgg tagtcatccc agatggcgta accgtcgatt
      661 tgactgataa agttatgacc gctaaaggta agcagggtga attgaatctg acttttgtag
      721 atgacgtagt cccgagtctc gaagaaggtt tgctttggat taaaccggcc aatgatacga
      781 tgaaagcccg taagttatgg ggtacgtttc ggtctctagc tggaaatgtt gttcacggag
      841 tcagtgaagg ctataccaag gatctgcaag tgagcggcgt tggttaccgc gctcaggttc
      901 aaggcaaaga tttggtgctt cagcttggtt acagccacga aatccgtcat ccaattccaa
      961 aaagcatcaa aattacctgt gaaacgcaga acgatatctc gatattcggt gcagataagc
     1021 agatggttgg cagtgtggct gctaaaatcc gctcttaccg tccgccagag ccttacaaag
     1081 gcaaaggtat taagtacaaa gatgagcaga ttctgcgtaa agaagggaag aagaagtagg
     1141 ttatgaaaac gacgaaacag ctttttaaac gtcgggtgca gcgcactcgc ggtaaagtta
     1201 aaaagaataa tagcggtcgt ccgcgtttgg ccgttttccg ttctggtaag cacatatacg
     1261 cgcaagttat tgatgatgcc agcggtgcaa ctgtcgcctc ggcctcatcg attgacaaag
     1321 atgtacgcgg taaattgaag aatggtgcca atattgatgc tgctactgaa gttggcaaaa
     1381 ttgttgccga gcgcgccaaa aaagccggtg ttgagaccgt tgtcttcgat cgcggcggct
     1441 atttatatca tggtcgggtg aaagctctgg ccaaggctgc ccgtgagggc ggactgtcat
     1501 tctaggagtt atggttgatg gcacaggaac ctaatacaca agaccctaat aagggacgtg
     1561 gcggccaaag aggcggtcgc ggtggtcggc gcggccaacg tggtgatcgt ccggaacgcg
     1621 gtgaccgtga cggcgatgag ctcattgata aattagttgg cattaaccgt gtcgctaagg
     1681 ttgttaaagg tggtcggcgc tttggttttg ccgctcttgt cgttgtcggt gatggccgcg
     1741 gccgggttgg ttttggcagt ggtaaagctc gtgaagtacc ggaagcaa
//
LOCUS       DASCNL010000203         2173 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000455957, whole genome shotgun sequence.
ACCESSION   DASCNL010000203 DASCNL010000000
VERSION     DASCNL010000203.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000455957"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..977
                     /locus_tag="QF359_02665"
     CDS             <1..977
                     /locus_tag="QF359_02665"
                     /inference="COORDINATES: protein motif:HMM:NF012742.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000976 - transcription cis-regulatory
                     region binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HJO85841.1"
                     /translation="VHSSTVSRVLNPETRKMVTEEIAAKILSAATEMGYRPNAFAQSL
                     KTNRSFTVGLMVPDLTNPAFAPIIKGIDNMLEAHGYSVIVANTYNLPEKQQSTVEKFR
                     ERHVDGLIIATAKRKDKLIDDCRREGTPFVQAVRASNDTDVSSVLSDEHIGGNMVISH
                     LAQLGHKRIAYVAGPQLFSTGYERYQGFLQGMKNAGLKPDRDLVVFCDEFSEEEGRNA
                     TSKLLAGRKKFTAVYAGNDIMALGVYDELEADGIKCGKDISVVGFDDMPFADKFNPPL
                     TTVHTPLVNVGAEAARILLENISDPDILARSIKLKPDLIVRASTGRVK"
     gene            complement(1022..>2173)
                     /locus_tag="QF359_02670"
     CDS             complement(1022..>2173)
                     /locus_tag="QF359_02670"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HJO85842.1"
                     /translation="SSSDILFEIGTDKVEMEVPAMADGVLAEILVAEGDTVAVGTKLA
                     VIEGTGEAAALSPDAFEPEAPKADPAATPVPVAERPERDRSMKLSPVVRKLLAENNLS
                     HTDVTGTGRDGRIKRGDVLDYMKGGAATVPTAPVPAEAPGAVSAEGITVVPFSYRRKM
                     TAEHMVRSKATSPHVLQAVEVDFSGVNKARQAIGADWKRQEGYSLTFLSFIAKAVCTA
                     IKDFPHINGHIEKDHLVVFDQVNLAIAVDLNFEGLVAPVIRDADLKTVTEIARATNEL
                     ARRARAGELTPDDMANATYTISNNGSFGTLITAPIINQPQVAILSTDSITKRPMVIEQ
                     DGEDLIVIRPVGILAQSFDHRAIDGSYSGAFMRRVKEILEGKNWVESVS"
BASE COUNT          513 a          595 c          554 g          511 t
ORIGIN      
        1 gggttcattc ctcgaccgta tcacgcgtgc ttaatccgga aacccgcaag atggtaaccg
       61 aggagattgc agctaagatt ctgtcagccg ccaccgaaat gggctatcgc cctaatgcct
      121 tcgcccaaag cctcaaaaca aatcgctcct ttacagttgg ccttatggtg ccggatctaa
      181 ccaacccggc attcgcaccg attatcaaag gcatcgataa tatgctggaa gcgcatggct
      241 acagtgttat tgtcgccaac acttacaacc tgccggaaaa acagcaaagc acggtggaaa
      301 aatttaggga acgccatgtt gatgggctga ttatcgcaac ggccaagcgc aaggataaat
      361 taatcgatga ctgccgccgg gaaggcacgc cctttgtcca ggccgtgcgc gcctctaatg
      421 atactgacgt gtcgtcggtg ctcagtgatg agcatatagg cggcaatatg gtaatttccc
      481 acctcgccca gctgggtcac aaacggatag cctatgttgc cggcccgcaa ttattttcga
      541 ccggctatga gcgctatcag gggtttttgc agggcatgaa aaatgccggt ttgaagccag
      601 atagggatct tgtcgttttc tgtgacgaat tttccgaaga agaaggccgc aatgccacct
      661 ctaaactgct ggctgggcgc aagaagttca ccgctgttta tgccggtaac gacatcatgg
      721 cgctgggcgt ttatgacgag ctcgaagccg atggcatcaa atgcggcaaa gacatttccg
      781 tcgttggttt cgatgacatg ccctttgctg ataagttcaa tccgccgctc accactgtgc
      841 acacgccgct ggttaatgtc ggcgccgaag ccgcccgcat acttttggaa aacatcagtg
      901 atcccgatat cctcgcccgc tcgatcaaac tcaaaccaga tttaatcgtg cgggcatcaa
      961 cgggacgggt gaaatagtta ataaaataaa aggtgcctgg cacctttcaa aaaattaact
     1021 tttagcttac cgactcgacc cagtttttac cttcaaggat ttctttgacc cggcgcatga
     1081 aggcgcctga gtacgagccg tcaatcgccc ggtgatcaaa gctttgggcc agaataccaa
     1141 ctggtcggat aacaatgaga tcttcgccgt cctgctcaat caccattggg cgcttggtga
     1201 tgctatcggt cgacaggatc gccacttgcg gctggttaat gatcggtgcg gtgattagcg
     1261 taccaaacga gccattgttc gagattgtat aggtcgcgtt ggccatatca tcaggtgtca
     1321 gttcaccggc ccgcgcgcga cgtgcaagtt cgttggttgc ccgagcgatt tcggtgacgg
     1381 tcttcaaatc agcatcccgg attaccggcg ccaccaagcc ttcaaaattg agatcgaccg
     1441 ctatcgccag attgacctgg tcaaacacca ccaaatgatc tttttcgata tggccgttga
     1501 tatgcgggaa atctttgata gccgtgcaaa cggctttggc aatgaacgac agaaaagtca
     1561 gcgaatagcc ttcctggcgc ttccaatcgg caccaatggc ttggcgggct ttgttgacgc
     1621 cagagaaatc cacttcaaca gcttgcagaa catgcgggct ggttgctttc gagcgcacca
     1681 tatgttcggc cgtcatcttg cgccggtagc tgaacggcac aacggtgatg ccttcagcgg
     1741 aaaccgcacc aggtgcttca gcgggaacag gcgcggttgg taccgtagcc gctccgccct
     1801 tcatataatc cagtacatca ccgcgcttga tgcggccatc ccggccggtg ccggtaacat
     1861 cggtatggct gagattattt tctgctaata attttcgcac caccggtgag agtttcatcg
     1921 aacggtcccg ttctggccgc tcagccactg gcaccggtgt tgcggcagga tctgcttttg
     1981 gcgcttcagg ttcgaatgca tcgggagaaa gtgctgccgc ctccccagtc ccttcaatca
     2041 cggcaagctt agtgccaaca gcaaccgtat caccttcagc aactaatatt tctgccagca
     2101 cgccgtcagc catcgccggc acttccatct cgaccttgtc agtgccgatt tcaaataaaa
     2161 tatcgctgga gct
//
LOCUS       DASCNL010000204         1317 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000457869, whole genome shotgun sequence.
ACCESSION   DASCNL010000204 DASCNL010000000
VERSION     DASCNL010000204.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1317)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1317)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000457869"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1317)
                     /locus_tag="QF359_02675"
     CDS             complement(<1..>1317)
                     /locus_tag="QF359_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HJO85843.1"
                     /translation="AAAFPENTEYELVQDKKSLQVWIEDAESVGMLAVDTETTSLDSM
                     QAELVGISMSVHPGKACYIPVAHTTPVEQVTLDLGLDDAPAAGKGNGAIKQIKRDEAI
                     KLIKPLLENPSVLKIGQNMKYDAEIFARYGIAIAPVDDTMLISYVLEGGLHGHGMDDL
                     AELHLDHQTIKFKEVAGTGKAQVTFDKVLLDTALDYAAEDADITLRLHKLLKPRLALE
                     HMVGIYETMERPLIKVLTDMERAGIKVDAKVLKDLSTDFAKRLGDLEVEIHQLAGHEF
                     NINSPKQLGEILFDEMGIEGGKKTKTSAYATGADILEGLAAEGHELPVKVLEFRQLAK
                     LKSTYTDALIEQINPETGRVHTNYGQAIASTGRLSSNDPNLQNIPIRTEDGRKIRTAF
                     VPSKENVLLSADYSQIELRLLAHVANIDVLKQAFHDGVDIHALTAS"
BASE COUNT          304 a          333 c          321 g          359 t
ORIGIN      
        1 tgcgaggcag tcagtgcatg aatatcgaca ccatcatgga aggcctgttt taacacatcg
       61 atattggcga catgggccag caggcgcagc tcgatttgcg aataatccgc cgataacaaa
      121 acgttttcct tagatggcac gaaggcagtc ctgattttgc ggccatcttc cgtgcggatc
      181 ggaatatttt gcagatttgg atcgttcgag cttaaacgcc cggtcgaggc aattgcctgc
      241 ccataatttg tatgcactcg cccggtctcg ggattgattt gctcgattag cgcatcggta
      301 taggtgctct tcaatttggc gagctgacga aattccaaca ctttgaccgg caattcatga
      361 ccctcagcgg caaggccttc caagatatcg gcgccggtag cataggcgct ggttttggtt
      421 tttttaccac cttcgatacc catttcatcg aacagaatct ctcctaattg tttcggcgaa
      481 ttaatattaa actcgtgtcc agcgagctga tgaatttcaa cttcgaggtc accgagacgt
      541 ttggcaaaat cagtgctgag gtctttgaga actttggcgt caactttaat accggcgcgc
      601 tccatatcgg tgagcacctt aatcaatggc cgttccatgg tttcatagat tccgaccata
      661 tgttccagtg ccagccgggg tttaagcaat ttatgcagcc tgagcgtaat gtcggcatct
      721 tcagctgcgt aatcgagcgc cgtatcaagc agtactttat cgaaagttac ttgcgcttta
      781 ccggtgccgg cgacttcctt gaatttaatt gtctgatgat caagatggag ttcggccaaa
      841 tcatccattc catggccatg aaggccgcct tctaagacgt aagatatcaa catggtatca
      901 tcgaccggcg caatcgcaat gccgtagcgg gcgaatatct cggcgtcata tttcatgttt
      961 tgaccgattt taagcaccga cggattctcc agcagtggtt tgatcagctt gatcgcctca
     1021 tcgcgcttga tttgtttgat ggcgccattg cctttaccgg cagcaggcgc atcatcgagg
     1081 ccaagatcta gtgtcacttg ctccacgggc gtggtgtggg ccaccgggat ataacacgct
     1141 ttgcctggat gaacggacat tgaaatacca accaattcag cttgcatgga atcaagcgag
     1201 gtggtctccg tatcaacggc caacatgcca acagactcgg cgtcctcaat ccagacctgc
     1261 aggctttttt tatcctgcac taattcgtat tcggtgtttt ctggaaacgc tgccgcg
//
LOCUS       DASCNL010000205         1074 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000458802, whole genome shotgun sequence.
ACCESSION   DASCNL010000205 DASCNL010000000
VERSION     DASCNL010000205.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1074)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1074)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000458802"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="QF359_02680"
     CDS             <1..312
                     /locus_tag="QF359_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HJO85844.1"
                     /translation="ITQWLCKTNFEFNVDKRAFTPPPKIMSSVLTLRPRSEPLFPTRF
                     DAMEKVTASAFGQRRKMLRSSLKSLDVDIEALGIDPTARAENLTIEEFCLLAKATEER
                     S"
     gene            complement(316..927)
                     /gene="gmk"
                     /locus_tag="QF359_02685"
     CDS             complement(316..927)
                     /gene="gmk"
                     /locus_tag="QF359_02685"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HJO85845.1"
                     /translation="MLVLSSPSGAGKTTISRALLERDDNLTMSVSATTRPMRPGEVDG
                     EDYFFVDKIKFNKMITDGELLEHANVFGNFYGTPRKPVEDALADGKDILFDIDWQGTQ
                     QLAANDSTRDDLVSVFILPPNTAELENRLRIRAQDPEDVVQKRMSKAVDEMSHYREYG
                     YVIVNDEVDASVRQVKTILTAERTRIGRQMGLHEFVQELREPD"
     gene            complement(959..>1074)
                     /locus_tag="QF359_02690"
     CDS             complement(959..>1074)
                     /locus_tag="QF359_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1732 domain-containing protein"
                     /protein_id="HJO85846.1"
                     /translation="REANTLCSKATDVELSKIGLELKAVIEQYREQVQNIE"
BASE COUNT          263 a          279 c          239 g          293 t
ORIGIN      
        1 atcacccaat ggctctgcaa gaccaatttc gaatttaatg ttgataagcg cgcctttacc
       61 ccaccaccaa aaattatgtc gagtgtgcta actttgaggc cacgatctga accacttttt
      121 ccaacccgct ttgacgctat ggagaaagtc actgcctctg cgtttggaca gcgccgcaaa
      181 atgctgcggt cttcgcttaa atcactcgat gtcgatattg aagctctcgg tattgaccca
      241 accgccaggg cagaaaattt aactattgaa gaattctgtt tactggcaaa agcaacagaa
      301 gaacgcagtt aaagcctagt caggttcccg caattcttgc acaaattcgt gcagccccat
      361 ttgccggcca atgcgggtgc gttcagcggt tagaatagtc ttaacttgcc ggacactggc
      421 gtcaacctcg tcattaacga taacgtaccc atattcgcgg taatggctca tttcatcgac
      481 cgctttagac atgcgcttct gtacaacatc ttcgggatct tgggctctga tgcgtaaccg
      541 attctcaagc tccgccgtat tcggcggcag tataaacacg ctcaccaaat cgtctctggt
      601 gctgtcattg gcggctaatt gttgagtgcc ctgccaatcg atgtcgaata aaatatcctt
      661 gccatcggca agtgcatcct cgacgggctt tctcggcgta ccataaaaat ttccgaatac
      721 attagcgtgc tcaagtaatt cgccatcggt gatcattttg ttgaacttta ttttatcaac
      781 aaagaaatag tcttcaccat cgacctctcc tggccgcatc ggtctggtgg tggctgagac
      841 cgacattgtt agattgtcgt cccgttccag cagcgcccgt gaaattgtcg ttttgccggc
      901 tcccgaagga gaagacagca cgagcatcag gcctcgcctg gaaaaagagc tgttgttgtt
      961 attcaatgtt ctgcacctgc tcgcgatatt gttcaatcac cgctttgagt tctagaccaa
     1021 ttttagacag ctcaacatca gtggctttag agcacaaagt gttggcttcg cggt
//
LOCUS       DASCNL010000206         1992 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000460328, whole genome shotgun sequence.
ACCESSION   DASCNL010000206 DASCNL010000000
VERSION     DASCNL010000206.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000460328"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            98..1303
                     /locus_tag="QF359_02695"
     CDS             98..1303
                     /locus_tag="QF359_02695"
                     /inference="COORDINATES: protein motif:HMM:NF017722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HJO85847.1"
                     /translation="MSVARRNIHGVTHYEKGRAFEGYTLFAPMLGRNVWLIDMMGQVV
                     HQWKMENVPGNYGKLLTNGNLLYLGKLIPSPLPEFGGNGGQLIEVDWEGNTVWEYRDP
                     LHSHCFAEMDNGNLMIAVWREVPEEIANTVQGGQPNTELNGVMWGEAIQEIDKKTKQV
                     IWEWNSFDHLDVDIDILGPLHPRDRWTNLNAITMLPDGNLLVSFRCINTICIIDKSTG
                     DIIWRWGPGEIAGQHNPTLLENGNILLFDNGAHRVYTTIDFSRVIEVNPKANKIEWEY
                     KDDPSFDFNSFICSGAQRQPNGTTLICEATKGRIFEVTKEGEMVWEFASPFYYDHAIF
                     GTNSMVFRAYRYAADHPGVKDADLDPGRYPDINALMPRRFIQGRSSDVPHVTGSSFEI
                     GGFRDEDLK"
     gene            1382..>1992
                     /locus_tag="QF359_02700"
     CDS             1382..>1992
                     /locus_tag="QF359_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85848.1"
                     /translation="MSETDNSPTNSETIDKPAGWPANQPPESTQDWSQFAESDREAGF
                     EISENFQRFSQKNDAFNRAWWDEAIMSPDVARFYGAHQNPQPRKADGFNQWDYALINS
                     AWSVARDFAARGHPEGRREGFLDPFQSFLPQAEKQVELPSIEETTSRIKQVAKFLGAE
                     KVGITPYDERWVYSHAADISSATRDEKPNTLKGDFKSVIVLAHG"
BASE COUNT          520 a          483 c          500 g          489 t
ORIGIN      
        1 aaatcattta agtatttggt gtttcgttgg caagatagat tgatacacta tcgaattgtc
       61 gatctaatct tttccagcga aacaacggag tcttaaaatg agtgtagcca gacggaatat
      121 tcacggcgta acccattacg aaaaaggccg cgcctttgaa ggttatactt tatttgcgcc
      181 gatgttaggc cgtaatgtgt ggctgatcga tatgatgggc caggtggttc atcaatggaa
      241 aatggaaaat gtgccgggta actacggcaa gcttctgacc aatggtaatt tgctttatct
      301 cggcaagctg atcccatcac ccctgccgga gtttggtggc aatggcggcc agctgatcga
      361 agttgattgg gagggcaata ctgtttggga ataccgcgac cccctccata gccactgctt
      421 cgccgaaatg gacaatggca atcttatgat cgccgtctgg cgcgaagtgc cagaggaaat
      481 tgccaatacg gttcagggcg gccagcctaa tacggaatta aatggcgtta tgtggggtga
      541 ggccatacaa gaaattgata agaaaaccaa acaagtcatt tgggagtgga attcatttga
      601 tcatctcgat gttgatatcg atatcttagg cccactgcat ccccgggatc gctggaccaa
      661 tctcaatgcc attaccatgc tgccggacgg taatctactg gtcagcttcc gctgtatcaa
      721 cacgatttgc atcatcgata aatccaccgg cgacattatt tggcgctggg gtccgggaga
      781 aattgccggt caacataatc caacattgtt ggagaacggt aatattctgc tgtttgataa
      841 cggcgctcat cgtgtctata ccaccatcga cttttcccgt gtcattgaag taaatcccaa
      901 agccaacaaa atcgaatggg aatataaaga cgacccttct ttcgatttca acagcttcat
      961 ttgttcaggt gcccagcgcc aaccgaatgg tacgacattg atttgcgaag ccaccaaagg
     1021 ccgcatattc gaagttacca aagaaggtga aatggtatgg gagttcgctt ctcccttcta
     1081 ttacgatcac gccatatttg gcaccaacag tatggtattc cgcgcttacc gctatgcggc
     1141 ggatcatccc ggcgtcaaag acgctgatct ggatcccggc cgctatcctg atatcaatgc
     1201 attaatgcca aggcgcttca tccaaggccg ctccagcgac gtgcctcatg tcaccggcag
     1261 cagtttcgaa atcggcggat ttcgcgacga agatttaaaa tagaccggct caaatatagg
     1321 gttgttgttt tttacctggt ttgctggcag attgttgtgt ccaaaaattg agagtggcgc
     1381 gatgtctgag acggataatt caccaacaaa tagtgaaacc atagataagc cggctggctg
     1441 gccggccaat caaccgccgg aatcgaccca ggactggagt cagtttgccg agagcgaccg
     1501 ggaagctggc tttgaaatca gcgaaaattt tcagcgcttc agtcagaaaa atgacgcttt
     1561 taaccgagcc tggtgggatg aagccatcat gtcgcctgat gttgcccgct tctatggtgc
     1621 ccaccaaaat cctcaacccc gcaaagcgga tggctttaat caatgggact atgctttgat
     1681 caattcggct tggtcggtcg cccgcgattt cgccgcccgt ggccatcctg aaggtcgccg
     1741 agagggcttt cttgatcctt ttcagagctt tttgccacaa gcggaaaaac aagtcgagtt
     1801 gccgtcaatc gaagaaacga ccagccggat caaacaggtc gcgaaattcc ttggcgccga
     1861 gaaagtcggc atcacgccct atgacgaacg ctgggtctat agtcatgcgg ccgatatcag
     1921 ctcggcaacg cgggatgaaa aacccaacac gctcaaaggt gatttcaaaa gcgtcattgt
     1981 gctggctcat gg
//
LOCUS       DASCNL010000207         1090 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000465651, whole genome shotgun sequence.
ACCESSION   DASCNL010000207 DASCNL010000000
VERSION     DASCNL010000207.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000465651"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /locus_tag="QF359_02705"
     CDS             <1..633
                     /locus_tag="QF359_02705"
                     /inference="COORDINATES: protein motif:HMM:NF015722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HJO85849.1"
                     /translation="PAGTKLKGRKVVKWFKGDYDEDVLFVGHLDMDMKLPTVEEIKRW
                     PANHITYYGARAFARYYGYDLPTLAEFTWAAEGGKGYKYGSNDGTANVNNIVYNGRTV
                     RDLPRRGKRFDFSKWPGKGKGHIQPVASRPANPYGVFDLSGNALEWIKTTDKKAKCIN
                     RQFKGYESFIRTGGSWNYFREAQSTVVKKCFYTSGFVANDHFGFRVVHHR"
BASE COUNT          303 a          245 c          278 g          264 t
ORIGIN      
        1 cctgccggaa ccaaacttaa agggcgcaag gtcgtaaaat ggtttaaagg cgactatgac
       61 gaagatgtcc tttttgtcgg tcatctcgat atggatatga aattacctac tgtggaagag
      121 atcaagcgtt ggccagccaa ccatatcacc tactacggag cccgcgcctt cgccagatac
      181 tatggctatg atcttccgac cctggccgaa ttcacctggg ctgcggaagg cggtaagggc
      241 tataagtatg gttcaaatga cggcacggca aatgtcaata atatcgtcta caatggtcgc
      301 acggtcaggg atcttccgcg cagaggtaag cggtttgatt tctccaaatg gcccggcaaa
      361 ggcaaaggac atattcaacc tgttgcatcg cgccccgcca atccttatgg cgtttttgat
      421 ttgtcgggta atgcgctcga atggattaaa acgacagaca aaaaagcgaa atgcataaat
      481 cgccaattca aaggatatga atcattcatc cgaaccggcg gctcctggaa ttatttcagg
      541 gaagcccaat cgacagttgt gaaaaaatgt ttttatacca gcggatttgt ggctaatgat
      601 cattttggtt ttagagtggt tcaccataga taggttcaga agtaaccgca ttttttttta
      661 aatgttctgc gatgcaatag acgaacagat cggcgaagtc gtattctgct aagtcccgat
      721 tggcgaactc ctgatagttg gtctacagta gttcgccgat ttcactgacc gccatccgcg
      781 acgagaagat tagttgttat ggtcgcccgg gcctaaaata cctaggagct gagtcggggc
      841 gatcatcgca aatggctacg gttcaatcag agggattgtg ctgatcaacc ggctaaccca
      901 taattgcagc tcaaggaaac cacagtatcg tagggagagg tccatgtctg agtccagtgt
      961 caaagttgag cgcaaaaaaa tcgaagggtt aatcgatcaa ccacattttg aaaacgcgat
     1021 tacgactgaa ggcggtaagt cggttcatat agctggccag ctgacgccgg aaggagacct
     1081 cgcggcccag
//
LOCUS       DASCNL010000208         3038 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000465829, whole genome shotgun sequence.
ACCESSION   DASCNL010000208 DASCNL010000000
VERSION     DASCNL010000208.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3038)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3038)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3038
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000465829"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(248..2668)
                     /locus_tag="QF359_02710"
     CDS             complement(248..2668)
                     /locus_tag="QF359_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HJO85850.1"
                     /translation="MVRSALSSPHAPAIPVWLTALFPQSFIEIARRRIVEFLGVGLIV
                     LALALIIALLSYHHADPSFNSAADGPAKNVMGLAGAYTSDIMLQILGASAFLPSLVFA
                     AWGWRLFSKKGVRFVWLRLLTMIAGVVLTSLALSLISAPEAWSFRTGIGGVAGYALLS
                     QATALLAPLKLAYSNVGVALLSGLIGVIILIYSGGLDRSEWIAIGRGAVQSVVSVWRG
                     VGFLSRQAQTLKERIEPTFGAEPENREAGPIDEVSQTSDEEVEAPLARSSELISKARK
                     KSTAVVTEKTKKAPAGKRAKDAGQGNLRLSVSNTYQLPPLDILVAPPAVTRIEKADKE
                     ALAQNAEVLESVLQDFGVKGEIVKVHPGPVVTLYELEPAPGTKTSRVVGLSDDIARSM
                     SALSVRIAVVPGRSVIGIELPNAKRDMVFFRELLASAAYEKTTGSLPLVLGKDIGGTP
                     NVVDLARMPHLLIAGTTGSGKSVAINTMICSLLYRLNPDECKFIMVDPKMLELSVYDG
                     IPNLLAPVVTDPSKAIVALKWAVREMGDRYRLMSQMGTRNITGYNSRLAEARKKGEEL
                     TRRVQTGFDEEGKPIYEDQPLSTNPLPLIVVVVDEMADLMMVAGKDIETAIQRLSQMA
                     RAAGIYLIMATQRPSVDVITGTIKANFPTRISFQVTSKIDSRTILGEQGAEQLLGQGD
                     MLYMAGGGQISRIHGPFISDSEVEHIVNFLKAQGEPVYVDAVTEEDGGGFDIPGAATS
                     NDSGDELYDEAVAIIAREGKASTSFIQRHLQIGYNRAARIIERMEAEGVVSKADRVGR
                     REVLVGTH"
BASE COUNT          782 a          784 c          733 g          739 t
ORIGIN      
        1 gcgctttaaa tcctgttgat tttcaacgct gagcttggcc gcaattgttt cagctgcctt
       61 cacaacggat attgtcgccg cctgggcaaa cagcgataga attccagcta aaagtaagtt
      121 tctaatagat atcattaaaa aaataaccaa acacttaaat tgggagctgc atcactcaag
      181 tgatgtaaca agtaatctat agcaagacca gaggagagtt tcgggctgaa aggtaaaaat
      241 tatttgatta gtgagtgcca acaagcactt cgcggcggcc cacccgatca gctttgctga
      301 ctacaccttc agcttccatg cgttcaatga tacgcgccgc cctgttatag ccaatttgca
      361 gatgacgctg aatgaagctg gttgatgcct taccttcacg tgcaatgatg gcaactgcct
      421 catcgtaaag ctcatcaccg ctatcgttgc tagtagcagc acctggaata tcaaagccac
      481 caccatcttc ttcggtgact gcatcaacat aaacgggttc accctgggct tttaagaaat
      541 taacgatgtg ctcaacttcg ctatcgctga tgaaaggacc gtggatacgg ctgatctgac
      601 caccgcccgc catataaagc atatcgcctt ggccaagcag ttgctcggca ccctgttcac
      661 ccaagattgt ccggctgtca attttcgagg ttacctggaa actgatccgg gtggggaagt
      721 ttgccttaat cgtgccggtg ataacgtcga ctgatggccg ttgggtcgcc atgatcagat
      781 aaattccggc agcgcgcgcc atttgcgaca aacgctggat ggcggtttca atgtctttac
      841 cggcgaccat cattagatcg gccatttcgt cgaccactac cacgatcagc ggtagggggt
      901 tggtgctgag cggttgatcc tcataaatcg gtttgccttc ctcatcaaag ccggtttgga
      961 cgcgccgggt gagctcctcg cctttcttgc gtgcttcggc aagccgcgag ttatagccgg
     1021 taatgttgcg agtccccatc tgcgacatca aacggtagcg atctcccatt tcgcgcaccg
     1081 cccattttaa ggcaacgatt gccttggaag gatcggtcac aaccggcgct aataaattgg
     1141 ggataccgtc atagaccgac agctcgagca ttttcggatc aaccatgata aatttacatt
     1201 catccggatt aagccggtat aacagcgagc aaatcatggt attaatagca acagatttac
     1261 cggagccagt ggtaccagca atcaatagat gcggcatccg ggcgagatca acaacgttcg
     1321 gtgtgccgcc aatatctttc cccaacacta aaggcaggct accggtggtt ttttcataag
     1381 ctgccgaggc caggagttcc cggaaaaata ccatgtctcg cttggcgttg ggcagctcaa
     1441 taccaataac gctgcggcca ggcaccacgg caatacggac tgataatgcg ctcatcgaac
     1501 gggcaatgtc atcggaaagg ccaacgaccc gcgaggtttt agtgccggga gccggttcca
     1561 attcatatag cgtgaccacc ggaccggggt gcactttaac gatttcacct ttgacaccga
     1621 aatcctgcag cacggattcc agcacctcgg cattttgcgc caaggcttct ttatcagcct
     1681 tttcgatcct ggttactgcc ggcggtgcta ctaaaatatc aagcggcggc aactgataag
     1741 tgttggaaac ggataaccgc agattacctt gtccagcatc tttggcacgt ttaccggctg
     1801 gcgctttttt agttttttcg gtgacgactg ccgtggactt ttttctcgcc ttagaaataa
     1861 gctcgcttga gcgcgccaat ggtgcctcga cttcttcatc agacgtttgg ctgacttcat
     1921 cgattggccc tgcttctcta ttttctggtt cagcaccgaa ggttggttcg attcgttctt
     1981 ttaaagtttg ggcttggcgg ctaagaaaac cgacgccgcg ccaaactgag acaacggact
     2041 gcaccgcgcc tcggccaata gcgatccatt cggatcgatc caggccacct gaatagatta
     2101 aaattatgac tccgatcaaa ccgcttaaga gcgctacacc aacattgcta taagcgagtt
     2161 tgagcggagc aagcagggca gttgcttgac tgagcagggc gtaaccggct acgccaccaa
     2221 taccggtccg gaacgaccag gcctcaggcg ctgaaatcag tgataaagcg agcgacgtca
     2281 aaactacacc ggcgatcatg gtcaacaagc gcagccaaac aaacctcact ccttttttac
     2341 taaacaagcg ccaaccccag gcggcgaata ccaggctcgg caaaaacgct gaagcgccaa
     2401 gaatttgtaa cataatatcg gacgtatagg caccagcgag acccatcacg tttttggccg
     2461 gaccatcggc ggcgctgtta aaagaggggt cggcatgatg atagcttaat agcgcgataa
     2521 tcagcgctag cgctaagaca atcagaccga ctcctaaaaa ctcgacaatg cggcgccggg
     2581 cgatctcaat aaagctttgc ggaaaaagcg ctgttagcca gactggaatt gcgggtgcgt
     2641 gaggtgaact aagagctgag cgtaccattc gccaactcta ggttgagttc ctttacactt
     2701 cgttaacaat ggttgaataa tgcgcgccaa acccttgaaa ataagctctt tttgctcttt
     2761 gggtaagggc ttttaagagc taacttcaag gttagcacat agtcctagct tatcactgcc
     2821 aaaagggctt aatggcttca tacatacctg ttcaccaaaa atactttatg ttttgccctc
     2881 ttcatccttc gctattggca ataccgttaa gcaagaagcg gttcgagttt gtctcggctc
     2941 acccaattcg agagaaaaag tagaagctgg tcttaatatt ttgatgcgag tgttaagcga
     3001 aacgcgaaag tcgccgacac tgattattta agcgtctc
//
LOCUS       DASCNL010000209         1210 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000467990, whole genome shotgun sequence.
ACCESSION   DASCNL010000209 DASCNL010000000
VERSION     DASCNL010000209.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000467990"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            51..>1210
                     /locus_tag="QF359_02715"
     CDS             51..>1210
                     /locus_tag="QF359_02715"
                     /inference="COORDINATES: protein motif:HMM:NF014758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO85851.1"
                     /translation="MGMKPSPFGTQIPYEEKELKVVGSNPEARPDAVDKVTGKARYAA
                     DINLPGQLIGKVLRSPHAHARIKSIDASEAEKLKGVKAVICRDDLPDMPVMHAAAGEI
                     MVNFRDVTRTIMAREKALFDGHPVAAVAATSESIAKAALKLIKVEYEVLPYVIDVVDA
                     MKPDAPLLHEDQITKGVEPTPEKPSNIAAQMVSKLGDIEEGFEQADLVVEREFNTKAA
                     HQGYIEPHASLAIYTEGGNAEVWTSTQGHFLIRAQIAEILEMDISRVKVTPAELGGGF
                     GGKNMIYLEPLAIVLSKKSGRPVKMVMTRDEVFRASGPTSGTNIIIKIGITKGGRITA
                     AQAILNYQSGCFPGSSLPLCTPTAFTRYDIANVLVIGNDVTCNRPKVTAYRSP"
BASE COUNT          304 a          313 c          334 g          259 t
ORIGIN      
        1 attattgagg ccgtcatgga cgccgcccaa gaaatgagag gagcctagac atgggaatga
       61 aaccatctcc ctttgggacc caaattcctt acgaggaaaa agaactcaaa gtcgtcggta
      121 gcaacccgga agctaggcct gatgccgttg acaaggtaac tggcaaggcg cgctacgctg
      181 ccgatatcaa cctgcccggg caattgatcg gcaaagttct gagaagcccg catgcgcatg
      241 cccgtatcaa atccatcgat gcctcagagg ctgaaaagtt gaaaggtgtc aaggcggtaa
      301 tatgtcgcga tgatttaccg gatatgccgg ttatgcatgc ggcagccggt gagattatgg
      361 tcaatttccg cgatgtaacc cgcactataa tggcgcgcga aaaagccttg tttgacggcc
      421 atcccgtagc cgctgtggcg gcgaccagcg aatcaatcgc caaggcggcc ctcaagctga
      481 tcaaagtgga gtatgaagta ctgccctatg tcattgacgt ggttgatgcc atgaaaccgg
      541 atgcgccatt gctacacgaa gatcaaatta ccaaaggtgt tgagccgact cccgaaaagc
      601 cgtccaacat cgccgcccag atggttagta agctgggtga tatcgaagaa ggttttgaac
      661 aggccgattt ggtcgtcgaa cgcgagttca ataccaaggc tgcgcatcag ggttatatcg
      721 agccccatgc cagtctggcc atttacaccg agggcggcaa cgctgaggtt tggaccagca
      781 ctcagggtca tttcctgatc cgcgcccaga tcgctgagat cctggaaatg gatatctcgc
      841 gcgtcaaggt aacgccggcg gaactcggcg gtggtttcgg tggaaaaaac atgatttatc
      901 tggagccact ggcaatcgtt ttatccaaga aatcaggacg gccagttaaa atggtgatga
      961 cgcgggatga ggtatttcgc gcctcggggc cgacttcagg caccaacatc atcattaaga
     1021 ttggcatcac caagggcggc aggataaccg cagctcaggc gattttgaac taccagtcgg
     1081 gctgttttcc gggctcttcc ttgccgcttt gcacgccgac ggctttcacc cgctacgata
     1141 tcgccaatgt attggtgatc ggtaatgatg tcacctgcaa ccggccaaaa gttacagctt
     1201 accggtcgcc
//
LOCUS       DASCNL010000210         4127 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000470633, whole genome shotgun sequence.
ACCESSION   DASCNL010000210 DASCNL010000000
VERSION     DASCNL010000210.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000470633"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(30..530)
                     /locus_tag="QF359_02720"
     CDS             complement(30..530)
                     /locus_tag="QF359_02720"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HJO85852.1"
                     /translation="MSEKNKSDQQTYIPDFYPTTLIRAIYVRNFTAMKEILRPFSITP
                     VQWRVLTNLQEFDGQNVNALAERSYTDRTNLSRAVAMLEEDGLVERRREDRDQRNVLV
                     FITEAGLKKFDEARPAALQDIDFVLEGLSKSEIDTLMALLNKIKHNTYRTRRPSQVEL
                     PEVGHA"
     gene            720..1760
                     /locus_tag="QF359_02725"
     CDS             720..1760
                     /locus_tag="QF359_02725"
                     /inference="COORDINATES: protein motif:HMM:NF012707.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HJO85853.1"
                     /translation="MKNFSFKARYLFAASLAIATFGIVANNAQADRLADVKKAGILHC
                     GVVPGVPGYAFPNKAGKMVGFDVDLCRAIAAAVLGDADKIKTTKMKLPVAFNAMKAGT
                     VDVVTHRFTWTFARDVGLGLDFTRVMVFDGQGFMVRKSLGVKTAKELDGATFCMSAGA
                     TTQGNVSDYFRKNGMKFKQVTFGSMGEAQKAYDAKRCDAFCTDKFGLGARRLSMTNPD
                     EHMILPETISNEPISPMVGHGDQVWKDIVVWTFNALIAAEEYGITSKNVDKVRATAKN
                     PFVQRILGTTGKFGAKIGLGKDWAYNAIKAVGNYGEMWEKHLGKDSRLNMPRGKNVLH
                     TKGGLLISPPFR"
     gene            1976..3019
                     /locus_tag="QF359_02730"
     CDS             1976..3019
                     /locus_tag="QF359_02730"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJO85854.1"
                     /translation="MARLGLKTGFDFLTDEAGFPISPALIDYSPRSTYIEAMIVTLLN
                     TIFLSLIAIILATILGFFIAMFKLSPNLLLRKFGNGYVEVFRNVPLLLQLFFWYFAAL
                     KMLPMKRSSISFFDVAFLNIEGFFIPLPVLEGGAEFVAWALLIATLISAIIWAWAKYR
                     QKNTGQPFPSLILGAGLIILLPLLVAWALDFPVTWEVPKFGRFNFKGGTALEPEFTAM
                     VFGLTLYNAAFVGEIIRAGIQSVDKGQKEAAGSIGFTNMQTYSQVIVPQAMRFIIPPV
                     TNQYLSLAKSTALAGAIGYADFFWAMDGAIAPQTGQVMELQAITLAGYLGISLFIAML
                     MAIYNHMTRIPER"
     gene            3029..>4127
                     /locus_tag="QF359_02735"
     CDS             3029..>4127
                     /locus_tag="QF359_02735"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HJO85855.1"
                     /translation="MEPILAPFKMPQPAPYQSKGLLGWLRANFFSSWFNSLITLLLVY
                     IIFNLANFLIHWAFINAVWFGDSAKSCPNSNGACWAFVTDRWHLFVYGLYPNELYWRV
                     NIVYVLAALTIISFLYSYGRWTKYFRITMVIIFPITAYIFLVGDTFDLKYVAPEEFGG
                     LLLTLVIASIAILGSIPLGLILALGRTSELKVISKVCTYFIEFWRGVPHIVIIVMFVA
                     LLPIFIPDGAGIDVVVRAFIAFAAFNSAYMAEVFRGGLQSIPIGQFEASRAIGMSYWK
                     MMGYIILPQAIRNSIPALMNTCIMIFKETTIVMLIGFSDLLGIIQLSLESSDWVGPPH
                     IFSSAYVFAALIYFSFTFGMSKYSLRLENRSN"
BASE COUNT         1009 a          907 c          939 g         1272 t
ORIGIN      
        1 ggtactgacc cccggatttt tgtgttgcat caggcatgac caacctctgg taattcgact
       61 tgtgacgggc gtcgggtgcg ataggtgttg tgtttaattt tattaagcaa tgccatcaga
      121 gtgtcgattt ctgatttcga cagaccttcg agcacgaaat caatatcctg caaagccgcg
      181 ggacgggctt catcaaattt cttcagcccc gcctcagtaa taaaaaccag gacattccgt
      241 tgatcgcggt cttcacggcg tcgctccacc agcccatcct cttcgagcat ggccaccgcg
      301 cggctgagat tggtacggtc cgtatagctt cgttccgcca gtgcattgac gttttggcca
      361 tcaaattcct ggagattggt caagactcgc cactgcactg gcgtaatact gaacggccgc
      421 aagatctctt tcatagccgt aaaattgcgc acatagattg cccggatcaa agtagtcgga
      481 tagaaatcag gtatataggt ctgttggtcc gatttatttt tttcgctcat tataatttct
      541 accttgtctt cttgattatt tccaccttgc cttcttatat aaattatgtt gcaataatac
      601 atatttacct tataatttct cttgtgacaa ttctgaatgt cattaaaatg acaagaaatc
      661 atttggctgt acaaaattaa ttttaagacc ctttaacaac ctattcagag aggaataaaa
      721 tgaaaaattt tagctttaag gcccgttatt tatttgccgc ttcacttgct atcgcaactt
      781 tcggcattgt tgccaataat gcacaggctg accgtcttgc cgatgttaag aaagctggca
      841 tcctgcattg cggcgttgtg ccaggcgtgc cgggttacgc tttcccgaat aaagccggaa
      901 aaatggttgg ctttgatgtt gacttgtgcc gcgctattgc tgcggcggta cttggtgacg
      961 ccgataaaat caagacaaca aaaatgaaac tacctgttgc ttttaatgct atgaaagcgg
     1021 gcaccgttga cgtggttacg caccgattta cctggacatt cgcgcgagat gtgggtctag
     1081 gcctcgattt tacccgcgtt atggtatttg acggccaagg tttcatggtt cgtaaaagcc
     1141 tcggcgtaaa aacagctaaa gagttggatg gcgcaacatt ttgcatgtca gctggtgcga
     1201 caacgcaagg taatgtgtcg gattacttcc gcaaaaacgg gatgaagttc aagcaggtga
     1261 catttggaag tatgggcgaa gctcaaaagg cgtatgatgc gaagcgttgc gatgctttct
     1321 gcacagataa gtttggtctt ggtgctcgtc gcttatccat gacaaacccg gatgaacata
     1381 tgatcttacc ggaaactatt tcaaatgagc ctatttcgcc gatggttggt cacggcgatc
     1441 aggtctggaa agatattgtt gtctggactt ttaacgctct tatcgccgct gaagaatatg
     1501 gtatcaccag caagaatgtc gataaggtga gggcaactgc gaagaaccca tttgtccagc
     1561 gtattttggg gacaacagga aagttcggag caaaaattgg actgggtaaa gactgggcct
     1621 acaatgccat taaagccgtc ggtaattacg gtgaaatgtg ggaaaaacat ttaggcaaag
     1681 atagtcgttt aaacatgcct cgaggcaaga acgtactgca tactaaaggt ggactgctta
     1741 tttctccgcc tttccgttaa gccttaacac cattatccaa taaactgatc cccgggtgcc
     1801 tcattaatta atttaatgag gcacctgtta gtattgaaac acttaagtct atttgatgga
     1861 aaatttactc agcttctggc gcaaaggcag tgtacgttcg cttacgtacc aatggggact
     1921 ggttgtagtc ataatttgcg ggatgttctg ggtatatgat atagcgacaa ccaatatggc
     1981 ccggcttggc ctgaaaacgg gcttcgattt tttaaccgat gaagccggct ttccgatcag
     2041 cccggcactt attgactaca gcccccgatc gacctacatc gaggcgatga tcgtaacctt
     2101 gctcaatacg atctttctat cgcttattgc cataattctc gccactatat tgggcttttt
     2161 tattgcaatg tttaaacttt cgccgaacct ccttctgcgc aagtttggta atggctacgt
     2221 ggaggttttc cgaaatgtcc ctctgctgct ccaacttttc ttctggtatt ttgcagcgct
     2281 taaaatgctg cctatgaaaa gatcttccat tagttttttt gacgtggcat ttctcaatat
     2341 agaaggtttc tttattccgt tacctgtttt agagggcggc gcggaatttg ttgcgtgggc
     2401 tcttttgata gcgacattaa tctccgccat tatctgggct tgggcaaaat accgacaaaa
     2461 aaatacaggg caaccttttc cgtcactcat tttgggagca ggcttgatca tcctattgcc
     2521 gctgcttgtc gcctgggctt tggattttcc agttacctgg gaagtaccga aatttggccg
     2581 ttttaatttt aaaggtggaa ccgctcttga accggaattt acagcaatgg tatttggtct
     2641 gacattgtat aatgcggcat tcgtgggaga gattatacgt gcaggcatcc aatccgttga
     2701 taaaggtcaa aaagaagccg ccggctccat tggctttacg aacatgcaga cttattccca
     2761 agttattgtt ccgcaagcca tgcggtttat tattcctcca gttacaaatc aatatttgag
     2821 ccttgccaaa tcgacagctc ttgccggcgc gataggttac gccgattttt tctgggccat
     2881 ggatggagca attgctccgc aaaccggaca ggtgatggaa ctccaagcaa ttactctcgc
     2941 cgggtatctg ggtatcagtc tttttatcgc catgcttatg gctatttaca accacatgac
     3001 ccgaataccg gaaaggtagt ttagaaagat ggaacctatt cttgctcctt tcaaaatgcc
     3061 gcagcctgcg ccataccaat ctaaaggcct gttaggttgg ctgcgggcta atttcttttc
     3121 aagctggttt aactcgttaa ttacattgct gctggtctat attattttta atctggctaa
     3181 tttcctaatt cactgggcat ttataaatgc cgtttggttt ggcgattcgg caaagtcgtg
     3241 tcccaatagt aacggtgcat gctgggcttt tgttaccgac cgctggcatc tctttgttta
     3301 tggtctatac cccaatgaac tctactggcg agtaaatatt gtctatgtat tagctgcgtt
     3361 gaccattata tcgtttctat attcttatgg tcgttggacc aaatattttc gcataacgat
     3421 ggtcatcatt ttcccaatta cggcgtatat tttcttagtc ggtgacacgt ttgatctaaa
     3481 atatgttgct cccgaggaat ttggtggtct tttattaacc ctggtaattg ccagtattgc
     3541 aatcctgggc tccattcctt tggggctcat cctggcactt ggtcggacat cagaacttaa
     3601 agtcatcagt aaagtctgta cttattttat tgagttctgg cgcggcgtac cgcatatcgt
     3661 tattattgtg atgttcgtcg cactccttcc gatttttatt ccggacggcg cagggataga
     3721 tgttgttgtt cgggcattta tagcttttgc agcatttaac tctgcgtata tggccgaagt
     3781 gtttagaggg ggtctacaat ctatacccat cggacaattt gaagcatccc gtgcaatcgg
     3841 gatgtcctac tggaaaatga tgggttacat cattttgccc caagccattc gcaactcgat
     3901 acctgcgttg atgaatacct gtattatgat atttaaagaa acaacgattg ttatgttaat
     3961 tggctttagc gacctgctcg ggatcattca gttgtcactt gaatcctccg attgggtggg
     4021 accgccgcat attttcagtt ccgcctatgt cttcgcagcc ctcatttatt tttcatttac
     4081 gttcggcatg tcgaaatatt ctctgcggtt ggaaaaccgt agcaatg
//
LOCUS       DASCNL010000211         1761 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000473632, whole genome shotgun sequence.
ACCESSION   DASCNL010000211 DASCNL010000000
VERSION     DASCNL010000211.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000473632"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(87..>1761)
                     /gene="argS"
                     /locus_tag="QF359_02740"
     CDS             complement(87..>1761)
                     /gene="argS"
                     /locus_tag="QF359_02740"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HJO85856.1"
                     /translation="DFTRVSVEPTRDPNHGDVATNAAMVLVKSAGLKPHDLAGQIVAG
                     LGDVDAVQSAEIAGPGFINIVLNDDFWHARLSEVLAAGKAYGDTTLGQGKSVNIEYVS
                     ANPTGPLHVGHGRGAVIGDVLANLVAKAGFDVTKEYYINDAGAQVDVLARSLHVRYRE
                     ALGENIGEIPKGLYPGEYLVGAGKALAARDGDKWQNGDEAEWLEPLRDFAIEAMMDLI
                     KEDLAALGVEHGVFSSERELVGGGGVDAVMKTLDDRDLIYIGVLEAPKGKKLDDWEER
                     PQTLFRATQFGDDVDRPVKKSDGSWTYFATDMAYHLDKFNRGFADMIDVWGADHGGYV
                     KRLQAAVKALTEEGGALEVKLCQMVNLLDKGEPVKMSKRAGTFVTLREVIDQVGKDVV
                     RFIMLTRKNDAQLDFDLTKVMEQSRDNPVFYVQYSHARCCSVLRHAEEIFEASEISME
                     AMQNADFKRLTDSAELSLIKIMAAWPQTVESAAEAREPHRIAYYLHDLSASFHALWTK
                     GSKEDTSLRFLSAEDRPLTVARLAMVKALATVIASGLEVMGVEPVEEMR"
BASE COUNT          435 a          531 c          381 g          414 t
ORIGIN      
        1 agtctcatca aggctaggct gatcaacaga gctctccccg gcggttaatt cttcatcatc
       61 attgatcggc gtatcgcttg gaaccatcac cgcatttcct caaccggctc aacacccatc
      121 acttcgagac cggacgcaat taccgttgcc aaagccttca ccatagccaa acgtgccaca
      181 gtcaaaggcc ggtcctccgc tgacaaaaac cgcagcgagg tatcctcttt acttcccttg
      241 gtccaaagcg catgaaagga ggcagataag tcatggagat aatatgcgat cctatgtggt
      301 tcgcgagcct cggcagcact ttccacggtt tgtggccaag ctgccatgat tttaatcaaa
      361 gaaagctctg ctgaatcggt caagcgtttg aaatctgcgt tttgcattgc ttccattgaa
      421 atctcactgg cctcaaaaat ttcttcggca tggcgtaaaa ccgagcaaca ccgggcatgc
      481 gaatattgca cataaaatac cggattgtcc cggctttgtt ccataacttt tgttaaatcg
      541 aaatcaagtt gcgcgtcgtt tttacgggtc agcataatga aacgaacaac atccttgccg
      601 acctgatcga tcacctcacg caaggtcacg aaagtcccag cgcgttttga cattttaact
      661 ggctcacctt tatccagcag attaaccatc tgacaaagct tcacttcaag cgcaccaccc
      721 tcttcggtca gcgcttttac cgccgcctgc aggcgtttga catagccgcc gtgatcggcg
      781 ccccagacat caatcatatc agcgaagccg cggttaaact tatccagatg ataagccata
      841 tcggtggcaa aataagtcca gctgccatcg gattttttga ccggccggtc gacatcgtcg
      901 ccaaactgcg tggcccggaa cagcgtctgc gggcgttctt cccaatcatc caacttttta
      961 cctttgggtg cctccagcac acctatatag atcaaatcac gatcatccag cgttttcatc
     1021 accgcatcaa cgccaccgcc gccaaccagt tcccgctccg agctaaacac gccatgctca
     1081 acgcccaagg cagcaaggtc ttctttgatg agatccatca tcgcctcaat ggcgaagtcg
     1141 cgaagcggct ccagccattc tgcttcgtca ccattttgcc atttatcgcc atcgcgcgca
     1201 gccaaagctt taccagcgcc gactaaatac tcgccgggat aaagaccttt cggaatttcg
     1261 ccgatatttt cgccaagcgc ttcgcggtag cgcacatgca gtgagcgcgc caagacatca
     1321 acctgagcgc ccgcgtcatt gatgtaatat tctttagtga catcaaatcc cgctttcgct
     1381 accagattgg ctagcacatc accgatcacc gcgccgcggc catgacccac atgcaacggc
     1441 ccggtgggat tggctgaaac atattcgata ttaacgctct ttccttgacc gagtgtggtg
     1501 tcgccgtaag cctttccagc ggccaaaact tcgctcagcc gagcatgcca aaaatcatcg
     1561 ttgagcacaa tattgataaa tcccggtccg gcaatttcag ccgattgaac agcatcaaca
     1621 tcgccgaggc cagcaacaat ctgtcccgcc agatcatgcg gtttcaggcc tgccgatttg
     1681 actaacacca ttgccgcatt ggtcgctaca tcgccatgat taggatcgcg ggttggctcc
     1741 accgagacgc gcgtaaaatc t
//
LOCUS       DASCNL010000212         1198 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000475632, whole genome shotgun sequence.
ACCESSION   DASCNL010000212 DASCNL010000000
VERSION     DASCNL010000212.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1198)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000475632"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..786)
                     /locus_tag="QF359_02745"
     CDS             complement(<1..786)
                     /locus_tag="QF359_02745"
                     /inference="COORDINATES: protein motif:HMM:NF012789.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HJO85857.1"
                     /translation="MNEIFHLSVDPNQQQRMAASPIASVWVSASAGTGKTKVLTDRVL
                     NLLLTGTQPQRILCLTFTRAAAAEMESRIADQLGRWTMMEEDILLNTLEELLGEKPED
                     QMIQRARRLFAEVLDTPGGMNIQTIHAFCQSLLGRFPLEADVAPHFALMDERDAEEML
                     IAAREDLLNRARCGQDEELAAALAEVTSHIHETQFPDLLAELTYARGRLRRLIDNHGD
                     IGAVIENVRSLLSVSADETPDSVITAASENEAFDELGLRVAIGA"
     gene            complement(786..>1198)
                     /locus_tag="QF359_02750"
     CDS             complement(786..>1198)
                     /locus_tag="QF359_02750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85858.1"
                     /translation="TTIEETKMKLVELKLRIAKAEEILEESVPEMQKKTALLQVIAEA
                     GGFAEIAAKPVSELDYWRLRGSNPAGEISSAGDEPLQLAADAKAGLEALIRLFDDVET
                     AYESRPRPDAAPKYSDFEHLARIKEWSSLEGDEG"
BASE COUNT          272 a          358 c          289 g          279 t
ORIGIN      
        1 cgccccgata gcaacacgca accccagctc atcaaatgct tcgttctccg acgctgcggt
       61 gattacgcta tcgggtgtct cgtcggcgct gactgacaat agagaccgca cattttcgat
      121 caccgctcca atatcaccgt gattatcgat aaggcggcgt aagcgacccc gggcgtaggt
      181 aagttcggcc agtaaatcag gaaactgggt ttcatgaata tgcgacgtga cctctgctaa
      241 ggccgccgcc agttcctcat cctgaccaca ccgggcgcgg ttgagcaaat cttcacgggc
      301 tgcaatcagc atttcctcag catcgcgttc atccattaag gcaaaatgtg gcgccacatc
      361 ggcttctaac ggaaaccgcc caagtaatga ttggcaaaaa gcatgaatgg tttggatgtt
      421 catgccgccc ggcgtatcca acacttcagc aaataaccgt cgcgcccgct ggatcatctg
      481 atcttctggc ttctcaccca ataattcttc aagggtgttt agcagaatgt cttcctccat
      541 catggtccaa cgacccaatt gatcggcgat gcgggattcc atttccgcag ctgccgcccg
      601 ggtgaaggtc aaacagagaa tacgttgcgg ctgggtgccg gtcagcaaaa ggtttaacac
      661 tcgatccgtc aacactttgg ttttgccggt gccggctgag gccgacaccc agaccgaggc
      721 aataggactg gcggccatac gttgctgctg attaggatcg accgagaggt gaaaaatttc
      781 gttcatcagc cctcatcccc ttccaaagac gaccattctt tgatgcgcgc taaatgctcg
      841 aaatcagaat attttggtgc cgcgtctggc cgagggcgcg attcataagc tgtttcaaca
      901 tcatcaaata gccggataag cgcctctaac cccgccttgg catcggctgc caattgaagt
      961 ggctcgtcac ccgccgagga tatttcaccg gccggattac tgccacgcag ccgccaataa
     1021 tcaagttcgc tgacgggctt ggctgcaatc tctgcaaaac cacccgcctc ggcaatcacc
     1081 tggagcaagg ctgtcttctt ctgcatctcc ggcacggatt cctcaagtat ctcctcggcc
     1141 ttggcgatcc tcaacttcaa ctccacgagc ttcatcttcg tctcctcgat tgtcgttg
//
LOCUS       DASCNL010000213         2250 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000475935, whole genome shotgun sequence.
ACCESSION   DASCNL010000213 DASCNL010000000
VERSION     DASCNL010000213.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000475935"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            49..1572
                     /locus_tag="QF359_02755"
     CDS             49..1572
                     /locus_tag="QF359_02755"
                     /inference="COORDINATES: protein motif:HMM:NF021010.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJO85859.1"
                     /translation="MKLIISAFTLLTILLGLPAIAAPGNADNGKKVYEKRCLMCHGEE
                     GDGAGPGAERLNPPPRDFSEALYKIKTTGADDPVPNDDDLYRMIRDGMPGTAMPGWTD
                     ILKEQEIWDLVLYLKTFAELEDEKPEDQLDYGTQVATSPESIAKGKKLFHDADRCSEC
                     HGQDGKGDAVKRLKDDAGARTWPRNLTKPWTFRASNDPKDIFTRVTVGIQGTQMPSFA
                     DEKSKKKLSIEERWHVANYVQSLAKTKRTVRAENTVVIAEKVDGDLPASADDKVWDVA
                     KPTTFAMVPQIVVKPRFFKAASDTITAQALYNDKEVAFLLEWDDRTKSIPGDEAATKI
                     ADPEMSEDAVAVQLPIQPAEGLEKPYFVAGDGAKPVNIWKWSAGTTKSAAKVELSNGQ
                     GLEKLEARNGKAVGLTAKGAYKNGTWRVVVKRPLKTEETDSDIQFEEGRFTPIAFAAW
                     DGSNSEKARSYTLTTWYWLLLKPPTSAKPIISGVIMALLLFGLLGWWARNAATKREG"
     gene            1576..1785
                     /locus_tag="QF359_02760"
     CDS             1576..1785
                     /locus_tag="QF359_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85860.1"
                     /translation="MQSASELPQDLKPQRGVIPRMFGVALIFIGALDAMLSWRAGNAI
                     EDFYIFLIAAGLFFLVIGQVRRRSE"
     gene            1870..>2250
                     /locus_tag="QF359_02765"
     CDS             1870..>2250
                     /locus_tag="QF359_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85861.1"
                     /translation="MNVTQAAKKADANSVSTAENQETFSRFLVALDASEYADHALAQV
                     LKLVPAADGQITGIHAYAARLHDARFRQMEGGLPDRYLDEEEMQYQRDVHDDLITDGL
                     SIVTDSYHDVAKAECDKRGLKFQRL"
BASE COUNT          566 a          545 c          623 g          516 t
ORIGIN      
        1 accgggtatc agccccgtag tttcggacac gagtaggggg ctgagcgcat gaaattgata
       61 atttccgcat ttacacttct gacaattttg ctcggcttgc ccgctattgc cgcaccgggc
      121 aatgccgata acggcaaaaa ggtttatgaa aaacgctgcc tgatgtgtca cggcgaagaa
      181 ggtgatggtg ctggccccgg tgccgagcgg ctcaacccgc cgccgcgtga tttttcggaa
      241 gcgctctata agattaaaac caccggtgcc gatgatcccg tgccaaacga tgatgacctc
      301 taccggatga ttagggacgg tatgccgggc actgccatgc caggctggac cgatatcctc
      361 aaggaacagg aaatttggga ccttgtgctt tatcttaaaa cctttgccga gctcgaagat
      421 gaaaagccgg aagatcaatt ggattacggt acgcaagtgg cgacctcgcc ggaaagtatc
      481 gccaaaggca aaaagctgtt ccatgacgct gaccggtgtt cggaatgtca cggccaggat
      541 ggtaaaggag atgcggtcaa gcggctaaaa gatgacgccg gtgcccgcac ttggccgcgt
      601 aatttgacca aaccctggac cttcagagcc agtaatgatc caaaggatat cttcacccgc
      661 gtgaccgtgg gtatccaggg tacgcaaatg ccgagttttg ctgatgagaa aagcaagaaa
      721 aaactttcta tcgaagaacg ctggcatgtt gccaactatg ttcaatcctt ggccaaaaca
      781 aaacgcactg tccgcgccga aaacacggtt gtcatcgctg agaaagttga cggcgatttg
      841 ccggcttcgg cggacgataa ggtttgggat gtggcgaagc caacgacctt tgccatggtg
      901 ccgcaaattg tcgttaagcc gcgctttttc aaagccgcca gtgacaccat tacagcgcag
      961 gcgctctaca acgacaagga agtcgccttt ttgctggaat gggatgaccg cactaaaagc
     1021 attcccggcg acgaagctgc taccaaaatc gccgatcctg aaatgagtga agatgcggtc
     1081 gccgttcagt taccgatcca accggctgag ggattagaga aaccttattt tgttgccggt
     1141 gatggcgcca agccggtcaa tatttggaaa tggagcgccg gcaccaccaa gtctgcggcc
     1201 aaagttgagc tttcgaacgg tcaggggctc gaaaaacttg aagcccgcaa cggcaaagcc
     1261 gttggcttga ctgccaaagg tgcttacaaa aatggtacct ggcgtgtggt ggtaaaacgt
     1321 ccgttgaaga ctgaagaaac cgacagcgat atccaattcg aagaaggccg attcacgccg
     1381 attgcgtttg ctgcgtggga tggcagtaac tcggaaaaag cgcgcagcta tacgctgacg
     1441 acctggtatt ggttgttgtt aaagccgcca accagcgcca agccgattat ttccggtgtg
     1501 attatggcgt tgctgctgtt cggcctgttg ggctggtggg cacgtaatgc ggctaccaaa
     1561 cgggagggtt agctgatgca atctgcttct gaattaccac aagatttgaa accgcagcgc
     1621 ggtgttatac cgcgcatgtt cggagtggcg ctgatcttta ttggcgcgct cgatgccatg
     1681 ctgtcgtggc gtgctggcaa tgcaatagaa gatttctaca tttttctaat tgccgcggga
     1741 ttgttctttc tggtgatcgg ccaggttcgg cgaagatcag aatagctcta atttgcaggt
     1801 tttgatccac atcaaggaag gcactttaga atctcgctaa ttttgacttc taaggtagga
     1861 gttaattaaa tgaatgttac ccaggcagcc aaaaaggctg atgccaactc tgtatccacg
     1921 gcggaaaatc aagagacctt ctcacggttt ttagtggcgc tggacgcttc ggaatatgcc
     1981 gatcacgcac tcgctcaagt attaaagctg gtcccggcag cggacggcca aattactggt
     2041 attcatgctt atgccgcacg gctgcatgac gcgcggtttc gtcaaatgga aggcggtttg
     2101 ccggaccgtt atctcgatga agaagagatg cagtatcagc gtgatgtgca tgatgatctg
     2161 atcaccgatg gcctctcaat cgtcaccgac agctatcacg atgttgccaa agccgaatgc
     2221 gacaaaaggg gccttaaatt tcagcgtttg
//
LOCUS       DASCNL010000214         1003 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000480359, whole genome shotgun sequence.
ACCESSION   DASCNL010000214 DASCNL010000000
VERSION     DASCNL010000214.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1003)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1003)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000480359"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..122
                     /locus_tag="QF359_02770"
     CDS             <1..122
                     /locus_tag="QF359_02770"
                     /inference="COORDINATES: protein motif:HMM:NF013104.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85862.1"
                     /translation="SAVASAVILFVVDKTIGLRVDSDAEAEGLDLSQHGEMIH"
     gene            540..>1003
                     /locus_tag="QF359_02775"
     CDS             540..>1003
                     /locus_tag="QF359_02775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HJO85863.1"
                     /translation="MRKYTISSVTIFLFSLISLAPSEAFAADKLSGGDTAWIITATAL
                     VLFMTMPGLALFYGGLVRSKNVLSVLMQCFTICCMASIVWLVVGYSIAFGGGNAWWGG
                     LSKVFLTGVSTDTLLGSIPEDVFFMFQMTFAIITPALIVGAYVERIKFGAVI"
BASE COUNT          231 a          213 c          246 g          313 t
ORIGIN      
        1 ggagtgcggt cgcctcggcg gtcatcctct tcgtggttga taaaacaatc ggtcttcgtg
       61 tcgacagtga cgccgaagcc gaaggtctag atctcagcca gcatggtgaa atgatccatt
      121 aaccggacac tctccaatcc ttagatgccc atcccaaaat attagtctgg gatgggcttt
      181 tgaggttcag aattttgtgc caaattgtgt gagcggacgg aattgtcctc ccttgttctt
      241 tcgctcatcc ggaccgtctt acgcatgcca cgccgtaaga cggtccaccc ttttttgact
      301 aaataatagt caaagtaagg ttattgctga aaaaataatc agaatacact ggtatttttt
      361 accataatgg gtcacgataa ttcattcaac gccttgaaaa taaatgatta atccacaatt
      421 ttggtaaacc ggcacggttc ttgatacttt attgttgcgt ggcgcacaaa aattcggaga
      481 aattcgattg gtttgaattc gagagctgcg tgaactgtgt gcaataggag gaccattaga
      541 tgcgtaaata tacgatcagt tcagtgacta tttttctttt cagtttaatt tctttggcgc
      601 caagcgaagc tttcgctgcc gataaactca gtggcggtga tacggcttgg attataactg
      661 caacggcttt ggtgctgttc atgaccatgc ccggcctggc tttattttat ggcgggttgg
      721 tacggtcgaa aaatgtactt tccgtgctga tgcaatgttt cacaatttgc tgcatggcct
      781 ccattgtctg gctggtcgtc ggttatagca tcgcttttgg cggtggtaat gcgtggtggg
      841 gaggtctgtc aaaggtgttc cttactgggg tatcaaccga tacgcttttg ggcagcatcc
      901 cggaagatgt ctttttcatg ttccaaatga cttttgccat tatcactccg gctctgattg
      961 tcggcgccta tgttgagcgc attaaatttg gtgcggttat ctt
//
LOCUS       DASCNL010000215         4058 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000481204, whole genome shotgun sequence.
ACCESSION   DASCNL010000215 DASCNL010000000
VERSION     DASCNL010000215.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4058)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4058)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4058
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000481204"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="QF359_02780"
     CDS             complement(<1..668)
                     /locus_tag="QF359_02780"
                     /inference="COORDINATES: protein motif:HMM:NF012705.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HJO85864.1"
                     /translation="MLQQETQLGKISDITSIVRKSGSSFYWAMRVLPPQKRNAMFAIY
                     AFCREVDDIADGEDDPDTKRAKLKLWRNEISNLYNGNPGNIITNALTGPVAAYGLARA
                     DFEAVIDGMEMDAADALRLQDMAELVLYCDRVACAVGRLSNAVFGLSGDQGNDLAKSL
                     GEALQLTNILRDIYEDAERDHVYLPADLLAHHGIANSSVSDIIEHPGIFEVCIELARR
                     AEEN"
     gene            complement(672..1820)
                     /locus_tag="QF359_02785"
     CDS             complement(672..1820)
                     /locus_tag="QF359_02785"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJO85865.1"
                     /translation="MILIILAGLSLAIWIVLVFFRGQFWRADQCLAAVSTPLTTLPNV
                     IAIVPSRNEEMTIGRTIASLLAQDYPGEFSIVIVDDNSDDDTANAVKVAAQATDHVTI
                     VEGSELPTGWTGKMWAVAQGVETAEAEFPNSAYYLLTDADIAHHPGNLSELMAKAVDE
                     KLALVSLMVRLRCETRWEHLLIPAFVFFFQKLYPFPWVNDSNKATAGAAGGCLLVKRS
                     ALENAGGIEAIKNDIIDDCALAKLLKKSNPIWLGLTHSTISLRGYDKLSDVWQMVCRT
                     AFVQLNHSTLKLAGTLFGMLLIYIVPIATILIGFLIQKIELLALGLGAWALMAIAYTP
                     TLRLYSRPAWEACLLPLAALLYTAMTLDSARQYWSNNAPAWKGRPNVK"
     gene            complement(1817..2671)
                     /gene="hpnC"
                     /locus_tag="QF359_02790"
     CDS             complement(1817..2671)
                     /gene="hpnC"
                     /locus_tag="QF359_02790"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR03464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HJO85866.1"
                     /translation="MRDATNPPEEVSSGKNIAYENFPVGSWLLPARLRPHIATFYQFA
                     RAADDIADSAELNTEEKISWLEQYEAVIKGEFAGENAPLKARDMAVSLAETNTTPQHC
                     LDLLAAFKQDTIKLRYQNWQELIHYCELSAAPVGRFLLDLHGGSKDGYGTSDALCVAL
                     QILNHLQDCQDDYQTLDRIYLPLDILEKHSAGVDELSASATTATLCHVFDEILVGVDK
                     LMLEAVKLPAGLKSRRLAMESQIIINIANRLSQKLLLGDPLKNRVELSKSQYMVCFVS
                     GVFQAQFR"
     gene            2734..3960
                     /gene="ispG"
                     /locus_tag="QF359_02795"
                     /gene_synonym="gcpE"
     CDS             2734..3960
                     /gene="ispG"
                     /locus_tag="QF359_02795"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006387854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HJO85867.1"
                     /translation="MALIERHKSIAVKIGDIVVGDGAPVVVQSMTNTDTADALSTVAQ
                     VAVLAQAGSELVRITVNTEAAAAQVASIRVQLDEMGCHVPLVGDFHYNGHTLLTKYPD
                     CAAALAKYRINPGNVGFKDKKDQQFTVMIEQAINNDKPVRIGVNWGSLDQDLLARFMD
                     DNAKLAEPKDVQLVVHDALVASALESAALAEEIGLPRDHIILSCKVSAVQDLIAVYQM
                     LADKCDYALHLGLTEAGMGSKGIVASTAALSVLLQQGIGDTIRISLTPEPGGDRAREV
                     IVAQEILQSMGIRSFTPQIAACPGCGRTTSTVFQELADDIQNYVREKMPEWGAQYSGV
                     EDMQAAVMGCIVNGPGESKHANIGISLPGTGEQPAAPVFIDGEKKITLRGDNIAAGFK
                     QIIDDYVAKSYPLKSH"
BASE COUNT         1046 a         1000 c         1036 g          976 t
ORIGIN      
        1 tagttttctt ctgcccgtct ggccaattcg atacagactt caaatatccc aggatgctcg
       61 ataatatcac tcacagagga gttagcaatg ccgtgatggg cgagtaggtc agccggtaaa
      121 tatacatgat cgcgttcggc atcttcataa atatcgcgca gaatattggt cagttgaagc
      181 gcttcaccaa gagatttagc taaatcattg ccctgatctc cgctcaagcc aaagacggca
      241 ttggataacc tgccgactgc acaggcgacc cggtcgcaat aaagcaccag ctcagccata
      301 tcctgaaggc gcaatgcatc ggcggcatcc atctccatgc catcaataac ggcctcgaaa
      361 tcggcccttg ccagtccata ggctgcaacc ggcccggtca aagcattggt aataatatta
      421 ccggggttgc cgttatagag attactaatc tcattccgcc agagtttaag ttttgcacgc
      481 ttggtatccg ggtcatcctc accatcggcg atgtcatcaa cttcccggca aaaagcataa
      541 atcgcaaaca ttgcgttgcg tttttgcggc ggcagtacgc gcattgccca atagaaagac
      601 gatcccgatt tccgaacaat cgaggtgata tccgagattt taccgagttg cgtctcttgt
      661 tggagcattg tctattttac gttcggacgc cctttccatg ccggcgcatt attggaccaa
      721 tactgtctgg ctgagtctag cgtcatggca gtataaagca atgcggcaag tggaagtaaa
      781 caggcttccc aggccgggcg tgaatatagt ctgagagtgg gtgtgtaagc gattgccatg
      841 agcgcccagg cccctaagcc tagcgctaac agttctatct tctggattaa aaatccgatc
      901 aaaatggtgg cgatcggcac gatataaatc agcaacatac caaatagagt gccagctaat
      961 ttaagcgttg agtggttgag ttggacgaaa gccgtccggc acaccatctg ccaaacatca
     1021 gatagtttgt catagccgcg aagactaatg gtcgagtggg tgagcccaag ccaaattgga
     1081 ttagattttt tcagcaattt agccaaggca caatcgtcga taatgtcatt ctttattgcc
     1141 tcaatgccgc ccgcattttc cagtgcggaa cgtttgacca gcaagcagcc accggccgcg
     1201 cctgccgtag ctttattcga gtcatttacc caagggaacg gataaagttt ttgaaaaaag
     1261 aaaacaaagg ctggaatcaa caagtgttcc caccttgtct cacatcgcaa tcgcaccatc
     1321 aaagatacca gcgctagctt ttcgtccact gctttggcca taagttcgga gagatttccg
     1381 gggtggtgag cgatgtcggc atcggtcaaa agataatagg cagagtttgg gaattcagct
     1441 tcggcggttt ccacaccttg cgccactgcc cacattttgc cggtccagcc ggttggcagc
     1501 tctgatcctt caacgattgt gacatgatcc gtagcctggg ctgctacttt gaccgcattg
     1561 gccgtatcat catcgctatt gtcatcgacg atgacaatgg aaaattcacc ggggtaatct
     1621 tgcgctaata aagacgcgat ggtacgcccg atggtcatct cttcattgcg cgacggtacg
     1681 atagcaataa catttgggag ggtggtaagc ggagttgaaa cggctgcgag acactgatca
     1741 gcccgccaaa actgcccacg aaaaaacacc aaaacaatcc agatggcgag agataatcca
     1801 gctaatatta taagtatcat cggaactgcg cctgaaaaac tcccgaaaca aaacacacca
     1861 tatactgtga ctttgaaagt tcaacgcggt ttttgagcgg atcaccgaga agaagttttt
     1921 ggctcagacg attggcaata ttgatgatga tttgagattc catcgccagc cggcggcttt
     1981 tgagcccagc tggcagtttc accgcctcaa gcattaactt atcaacaccc accaatattt
     2041 catcaaatac gtggcacaaa gttgcggtgg ttgctgacgc tgacaattca tcaacgccgg
     2101 cgctatgctt ttccaaaata tcgagcggta gataaatacg atcaagggtc tggtagtcat
     2161 cctgacagtc ctgcaaatgg ttgagaattt gtagcgccac acaaagggcg tccgaagtcc
     2221 catacccgtc ttttgatccg ccatgcagat caagcagaaa gcgcccgaca ggtgcggctg
     2281 acaattcgca atagtggatt agttcctgcc agttttgata acggagcttg attgtatcct
     2341 gcttaaacgc agccagcaaa tcgaggcaat gttgaggtgt tgtattagtc tcggccaaac
     2401 ttaccgccat atcgcgggct tttaatgggg cattctcgcc tgcgaactca cctttgatca
     2461 cagcttcgta ttgctccagc caagaaattt tttcttctgt gtttaattcc gctgaatcag
     2521 caatgtcgtc ggcggcccgg gcaaattggt aaaatgtcgc aatatgagga cgcagccgcg
     2581 ccggcaacag ccaggagcca accggaaaat tctcgtaagc gatattttta ccggaggata
     2641 cttcctcagg tgggttggtt gcgtccctca taatgaggcg atgatcgcag aagaaagctg
     2701 gtaagtccaa tccagctggg ataaaaagcg tccatggctt taatcgaacg gcataaaagt
     2761 attgcggtaa aaatcggtga tattgtcgtc ggtgacggag cgccggttgt ggtgcaatcc
     2821 atgaccaata cggatacggc ggatgccctg tcgacggtgg cacaagtggc ggtgctcgcc
     2881 caggcaggtt ccgaacttgt acgtatcaca gttaacaccg aagcagcggc cgcgcaggtt
     2941 gcgtcaattc gtgtccaatt ggatgaaatg ggctgccatg tgccgctcgt cggtgatttt
     3001 cattacaatg gtcacacatt gctaactaaa tatcccgact gtgcggcggc gctggctaaa
     3061 taccgcatca accccggcaa tgttggtttc aaagataaaa aagatcagca attcaccgtc
     3121 atgattgagc aggcgatcaa caatgataag ccggtccgta ttggcgtaaa ttggggcagt
     3181 ttggatcagg atttgctggc gcgctttatg gacgacaatg ccaagctcgc cgaacctaaa
     3241 gacgttcaac tggtggtgca tgacgcgttg gtcgcgtctg cattggaaag tgcggcgctc
     3301 gccgaggaaa ttggcctacc acgcgatcac attatattgt cctgtaaagt cagcgcggtg
     3361 caggatttga tcgctgtcta tcaaatgctg gcggacaaat gtgactacgc gcttcatttg
     3421 ggtctcaccg aagcgggcat gggctcgaaa ggtattgtcg cctcgacggc agcgctctcg
     3481 gttctactgc aacaaggcat cggcgatacc attcgtattt cactgacccc ggagccgggt
     3541 ggcgaccggg cgcgcgaagt catagtcgct caggaaattt tacagtcgat gggcattcgg
     3601 tctttcacgc cgcaaattgc cgcttgcccc ggttgcgggc ggacgaccag cacggtgttc
     3661 caggaactcg ctgacgatat tcaaaactat gtgcgggaaa aaatgccgga atggggtgcg
     3721 caatatagtg gcgtcgaaga catgcaggcc gccgtgatgg gctgcatcgt taatggtcct
     3781 ggagaaagca aacatgccaa tatcggcatc agcctgcccg gaacgggtga acagccggcg
     3841 gcaccggttt ttatagatgg cgaaaagaaa ataactttgc ggggtgacaa tattgctgcc
     3901 gggttcaagc agattattga tgactatgtt gcgaaaagct atcctcttaa atctcactag
     3961 atgagctgtt ctgagggctg gacagaaccc ggcttttttc ctataagcgc gtctcacaca
     4021 ggtaactttc gtacaatctg tctgataaat atgcccag
//
LOCUS       DASCNL010000216         1178 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000489550, whole genome shotgun sequence.
ACCESSION   DASCNL010000216 DASCNL010000000
VERSION     DASCNL010000216.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000489550"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="QF359_02800"
     CDS             complement(<1..668)
                     /locus_tag="QF359_02800"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013791.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HJO85868.1"
                     /translation="MKLKNENRWGLKVVGIAFLALIFFLTPIIISGNFSGEFFNIAAQ
                     AAEQAAESVAEGGDAEKATSLYGPAPKTTLASYPTVKGVNSRIVIWLVAQLHLWFAAF
                     VLAVPIFVFIIEAIGMRTRDRRYDNMAYEFIKVSITAYSLTAILGGLLLFSLVLFYPD
                     LWSYLATIFKDSMFWYAVLFFAESACLYLYYYGWHWLQGGDRKWVHLTIGLLLNAVGT
                     MLMFL"
BASE COUNT          341 a          290 c          264 g          283 t
ORIGIN      
        1 aggaacatca gcatggtgcc aaccgcattg agcagcagac cgatcgtcag atggacccat
       61 ttgcggtcac cgccctgcaa ccaatgccag ccataataat aaagatagag gcaagcactc
      121 tcggcaaaga atagcaccgc ataccagaac atgctgtctt taaagatggt cgcgaggtag
      181 ctccagagat cgggatagaa caggaccaaa gagaacaaca gcaagccgcc caaaatggcg
      241 gttaaggaat aagcggtgat gctgaccttg ataaactcgt aagccatgtt gtcgtagcgc
      301 cggtcccgcg tccgcatgcc gatggcctcg atgatgaaaa caaatatcgg cacggcgagc
      361 acaaaggcgg caaaccaaag atgcaattgc gccaccagcc aaatgacgat gcggctgtta
      421 acacctttga cggtcggata gctggcaagt gtggttttgg gcgccggacc ataaagcgag
      481 gttgctttct cagcgtcgcc accttctgct accgactccg ctgcttgttc ggcggcttga
      541 gcggcaatgt taaaaaactc accgctgaaa tttccactga taatgattgg ggttagaaaa
      601 aatatgagag ccagaaatgc aatgccgact acttttaatc cccacctatt ttcattttta
      661 agcttcattc tggtacttgc cttcaaatcc ttactggtgg aaaaacaggg atattccctg
      721 caaattcatg agcccccaat cgagcacaaa aaaaccgacg ccgctgatag cgaacgagat
      781 aatgaaaggc ataagataat ttttcacctt ggcgtctccc tatctaaccg gtctaaaaca
      841 gcactgccca aaaaaccaca cagatagcga tcagcacggc ggtaaacagt gccggtccga
      901 accaggtgga ttcattattc tgtggagctt ctgaattcat gttttcaaac cgtctctatt
      961 accaagattg atcaacgtag ttttgaagga taaaatgagg ccgaaaaaca aagtgaatta
     1021 agcatgttta atttcaaaaa cttccggccc attgactggg ttattttttt cggggccgcc
     1081 gtcaattttg ttgtaatcgt gctcattcta atctttttcg ttttctagcc tgccttccct
     1141 ttacatttgc atagatcacg caaatgcttt atcagacc
//
LOCUS       DASCNL010000217         1125 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000490788, whole genome shotgun sequence.
ACCESSION   DASCNL010000217 DASCNL010000000
VERSION     DASCNL010000217.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000490788"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..464)
                     /locus_tag="QF359_02805"
     CDS             complement(<1..464)
                     /locus_tag="QF359_02805"
                     /inference="COORDINATES: protein motif:HMM:NF015786.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HJO85869.1"
                     /translation="MSIDPHSQDAPQIKPAAWVQKHSPLIPKSGQVLDLACGRGRHTR
                     YLLQQRFKVLALDRDVSGLNDIVGDSSLEIMSADLEAGGDSPFKGRRFAGVVVVNYLY
                     RPLFDDLIAALDDGGVLIYQTFMVGNEEFGRPRNPDFLLKENELREVFGGEL"
     gene            603..1064
                     /locus_tag="QF359_02810"
     CDS             603..1064
                     /locus_tag="QF359_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HJO85870.1"
                     /translation="MILYDLRCSQGHAFEAWFKDSSTYDQQAKRGDVECPVCSDTSVE
                     KAIMAPRLSSATRKKGIVHDGPVPRTGPGKERASEVAREFLDAVGKIQKHVEENCEDV
                     GDNFADEARAIHYGDAEERGIYGEATETEVENLVEEDIPVSRIPFKKRNLS"
BASE COUNT          322 a          272 c          246 g          285 t
ORIGIN      
        1 tccaactccc caccaaacac ctcacgcaat tcattttcct tcaatagaaa atccggattg
       61 cgtggccggc caaactcttc attgccgacc ataaaggttt gatagatcaa cacaccgccg
      121 tcatccaatg cagcgatcaa atcatcaaaa agcggccggt agagataatt aaccaccaca
      181 acacccgcaa accggcggcc tttgaacgga gaatccccac cagcttccaa atcagcagac
      241 ataatttcta aacttgaatc gcctacaata tcgtttaacc cgctgacatc tctatcaagt
      301 gcgagcactt taaacctctg ttgtaataaa tagcgcgtat gacggccgcg accacaggca
      361 aggtccaaca cctgtccact tttggggatt agagggctat gtttttgcac ccaggcagca
      421 ggcttaattt gtggcgcatc ttgcgaatgt ggatcgatgg acatatttta tatatattaa
      481 cagatttatg taaatactgg ctaaagcttg gcattcgact taaactaggc taagtctcgc
      541 gaccccgcca attattgttt ggcgattatg agtttataat tgagtaatga ctagggtttt
      601 caatgattct ctatgacctc agatgttctc agggccacgc cttcgaagct tggtttaaag
      661 acagtagcac ctatgaccag caagccaagc gtggtgatgt cgaatgtccg gtctgttctg
      721 atacatcggt tgaaaaagcc atcatggcgc cccggctatc atcggcaact cgcaaaaaag
      781 ggattgtgca cgatggaccg gtgcctcgca caggccccgg caaagagcgt gcctcggaag
      841 ttgctcgtga atttctcgat gctgtcggca aaattcaaaa acacgttgaa gaaaactgcg
      901 aagatgttgg tgataacttt gccgatgaag cacgcgccat ccattacggc gatgctgaag
      961 aacgtggtat ttatggtgag gcgaccgaaa ctgaagtcga aaatctcgtt gaggaagata
     1021 ttccggtctc gcgcattcct tttaaaaagc gcaatctttc ttaaaaaaat taccttggtt
     1081 ttgccgcaga cataaagtaa ttcacatcaa gatttttaga tagcg
//
LOCUS       DASCNL010000218         2217 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000491279, whole genome shotgun sequence.
ACCESSION   DASCNL010000218 DASCNL010000000
VERSION     DASCNL010000218.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000491279"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1697
                     /locus_tag="QF359_02815"
     CDS             <1..1697
                     /locus_tag="QF359_02815"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO85871.1"
                     /translation="SSGITIYAAKQSPYFIYRQLASCFKLPLSKVRVIQPYVGGGFGG
                     TKNDSTAGDFCAVMLAKKTKRPVKFVYNMEEVLTTCRRRHNMIVDCKMGMKKDGSITA
                     VQTKVIADGGAFTAIGPLTMYLTGIMTTLPYKLDHYKHDAYRVFTNHPVSAAMRGHGV
                     THTRFAAEIQMEKMADELGIDPVEVRMKNAIEAPHETINGITVDTCGLKEGLEIVSSS
                     SAWKDKDQNKKDGPVVRGIGISGTSHLGGARQRGHQSCAAIVRLCEDGTVNYLTGASD
                     AGQGSDTVLVQLVAEELGLTMEDVTIQRVDTAVTPVDNGSYGSRVTILAGQAAQKAAQ
                     EVKRQLAEAAANIWEVDAGKILFNDRTVFVDGDPDKSMSFKKLTQIACYSETGAVIMG
                     KGFSEYGLEKMDFEKGYGNPGVNYSFTSQLSAVDVDIETGMVKVKDFLIAHDCGRPLH
                     PVNVEAQTQGAASQGLGQALYEDFKMREGRTMNSTMVNYMMPLSTEHPDFELHDIITD
                     DPHGPFGAKEASEGSIISTPPSIVSAIHDATGIWFTKLPVTPEKIVLALKEKKENG"
     gene            1697..>2217
                     /locus_tag="QF359_02820"
     CDS             1697..>2217
                     /locus_tag="QF359_02820"
                     /inference="COORDINATES: protein motif:HMM:NF014790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO85872.1"
                     /translation="MEYPFDNDQKTFREHLSRWVDERLIPRAEELDESGEFARDLFKE
                     LGELGYLGIKYPEEYGGAGLDQRYVYYTMLCEELARGSMGFAATVAMHGSAASHMLFE
                     DGTEEQKQKYLVPALKGDMVCAFAITEPQAGSDAAAIRTRAERTNDGWVINGNKIFTS
                     NSVYADFITVVAKV"
BASE COUNT          560 a          584 c          583 g          490 t
ORIGIN      
        1 attcttcagg catcaccatt tatgccgcca aacagagccc ttatttcatt tatcgtcaac
       61 tggcgtcgtg cttcaagtta cctttaagca aagtccgcgt tatccagccc tatgtcgggg
      121 gcgggttcgg cggcaccaaa aacgattcca ccgccggtga tttctgcgcg gtcatgctgg
      181 ccaagaaaac caaacggccg gtaaaattcg tttacaacat ggaagaggtg ctgacgacct
      241 gccgccgccg tcacaacatg attgtcgatt gcaaaatggg catgaaaaag gacggctcta
      301 tcacagcagt gcagaccaaa gtaatagccg atggcggcgc ctttacggcg atcggaccgc
      361 tgacgatgta cctcaccggc attatgacga ccctgcccta caagctggat cactataaac
      421 atgatgccta ccgggtcttt accaatcatc cggtgagcgc tgccatgcgc ggccatggcg
      481 tcacccatac ccgctttgcc gctgaaatcc agatggagaa aatggccgat gaattgggca
      541 tcgatccggt cgaggtgcgc atgaaaaatg ccatcgaagc gccccatgaa acgattaacg
      601 gtattaccgt cgacacttgc ggcctcaaag aaggtttgga gattgtatcc tcatcctctg
      661 cctggaaaga taaagatcaa aataaaaaag acggtccggt ggtccgaggt attggcattt
      721 cgggcacatc tcatctcggt ggcgcccgtc agcggggcca ccaatcctgt gccgccattg
      781 tccgcctgtg tgaagacggc acggtcaatt acctcaccgg cgccagtgac gccggccagg
      841 gatcagatac ggtgttggtc cagctggtcg ccgaagaact cggcctgacg atggaagacg
      901 tcactatcca gcgggtcgat acggcggtga ccccggtcga taacggcagc tatggcagcc
      961 gggtgactat tttagccggt caagcagcgc aaaaagcggc tcaagaggtt aaacgccaac
     1021 tggctgaggc tgctgccaac atctgggagg ttgatgccgg taaaatcctg ttcaacgacc
     1081 ggaccgtctt tgtcgatggt gacccggata aatccatgtc tttcaaaaaa ctcactcaga
     1141 ttgcctgtta ttcagaaact ggcgcggtga tcatgggtaa aggcttttct gaatacggtc
     1201 tggaaaaaat ggattttgaa aaaggttatg gcaatccggg ggtcaattac agtttcacct
     1261 cacaattgtc ggcggtcgat gtcgacattg aaaccggcat ggtcaaggtc aaagattttc
     1321 tcatcgccca tgattgcggc cggcccttgc atccggtgaa tgtcgaagcc cagacccagg
     1381 gtgctgcttc ccaaggcttg ggccaagcac tttatgagga tttcaaaatg cgcgaaggcc
     1441 gcaccatgaa ctcgaccatg gttaattaca tgatgccgct ctcgaccgaa cacccggatt
     1501 tcgaattgca cgatatcatc accgatgatc cgcatgggcc ctttggggct aaggaagcgt
     1561 cggaaggctc gatcatttcg actccacctt ccatcgtcag tgcgattcat gatgccaccg
     1621 gtatttggtt caccaaactt cccgtgacac cggagaaaat tgtgctcgca cttaaagaaa
     1681 aaaaggaaaa tggctaatgg aatatccctt tgacaacgac caaaaaactt ttagagaaca
     1741 tctttcccgc tgggttgatg aacggctgat cccccgtgcc gaagagttgg atgaaagtgg
     1801 cgaatttgcc cgtgacctgt tcaaggaact cggtgaactg ggctatctcg gcatcaaata
     1861 ccccgaggaa tatggcggtg ccggattgga tcagcgctat gtttattaca ccatgctctg
     1921 cgaggaactg gcacgaggct caatgggctt tgccgccacg gtcgcgatgc atggctcagc
     1981 cgcgtcgcat atgttgttcg aggatgggac cgaggaacaa aaacaaaaat acctggtgcc
     2041 agcactgaaa ggtgacatgg tttgtgcttt tgccatcacc gaaccccaag cgggctccga
     2101 tgccgcagcc atccgtacca gggccgaacg caccaatgac ggctgggtca tcaatggcaa
     2161 taaaatattc acctcaaaca gtgtttatgc cgattttatc accgtggttg ccaaagt
//
LOCUS       DASCNL010000219         1008 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000497416, whole genome shotgun sequence.
ACCESSION   DASCNL010000219 DASCNL010000000
VERSION     DASCNL010000219.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000497416"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1008)
                     /locus_tag="QF359_02825"
     CDS             complement(<1..>1008)
                     /locus_tag="QF359_02825"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO85873.1"
                     /translation="RLGGAIGSAVVITLVLKPLAKEFGGDSENKRILLWIIDVVILIG
                     FLFTLFNFAEVYESLWDGVIILEAPTLAIGFFGTLVIIEMVRRNFGIILPIICIVMLV
                     YAQFGDLPGIFGHRGFTFEEVVEVSWFSFGGVFGRPTDIVSSIVLVFIVFGAILESTG
                     ATTILLKMATVATARIRGGTAHSAIVASAMFGTISGSPVANVVGTGVFTIPMIKRQGF
                     TNAFAGAVEAAASSGGQFTPPIMAAVAFIMAELIGVPYIQIAIAAAIPAFFYYFSLFA
                     SVYAEAVRLGIEPLEEDQIPVLTKDDWIESMRFIVPLVVVVAVLFAGRSAAMAGFSAI
                     VA"
BASE COUNT          312 a          265 c          237 g          194 t
ORIGIN      
        1 ggctacaatg gctgaaaatc cggccattgc cgcggaacgt ccggcgaata atacggcgac
       61 cacaacgacc agcgggacaa tgaatcgcat cgactcgatc cagtcatcct tggttagaac
      121 cggtatttga tcttcttcga gtggctcaat tcccaagcgt accgcttcgg cataaacgct
      181 cgcgaataaa ctaaagtagt agaaaaatgc cggaatagct gcggcaatcg caatttgaat
      241 atagggaacg ccgatcagct cggccatgat gaaggcgaca gcagccataa ttggcggtgt
      301 aaactgacca cccgatgaag cagctgcctc gaccgcaccg gcaaaggcat tggtgaagcc
      361 ttgacgttta atcattggga tggtgaagac gcccgtaccg acaacattgg cgacaggact
      421 gccggaaatg gtgccgaaca tcgcactggc tacaattgcc gagtgggctg tgccaccgcg
      481 aatacgcgct gtcgcgacgg ttgccatttt aagtaaaata gtggtggcgc cagtagattc
      541 caatatggcg ccaaatacaa taaagaccaa aacaatcgaa gagacaatat cggtcggtcg
      601 gccaaagaca ccgccaaaac taaaccagct aacttcgact acttcttcaa aagtaaaacc
      661 gcgatggcca aagatgccgg gcaagtcgcc aaactgggca taaaccagca taacgataca
      721 aattattggc aagatgatgc caaaattccg gcgcaccatt tcaatgatca ccaacgtgcc
      781 aaagaaacca atggctaatg tcggcgcttc cagaataatc acgccgtccc aaagactttc
      841 gtaaacttcg gcgaaattaa acagcgtgaa caaaaagccg attaatatta cgacatcaat
      901 aatccatagc aatatccgct tattctcaga gtccccgcca aattccttgg ctagcggttt
      961 aagcaccagt gtaatgacaa ccgccgaacc aatggcgcca ccgaggcg
//
LOCUS       DASCNL010000220         2611 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000499304, whole genome shotgun sequence.
ACCESSION   DASCNL010000220 DASCNL010000000
VERSION     DASCNL010000220.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000499304"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1687
                     /locus_tag="QF359_02830"
     CDS             <1..1687
                     /locus_tag="QF359_02830"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO85874.1"
                     /translation="TRGEEGSKASKVTAHNILRLSPSSDGTEVYYSSEVSITGRLGKF
                     GFGVMKKKAKRLGEEFAENFRQRIETSNVNATDSEAIPAPTIQTGENKTMGKANWQDM
                     REFMDALEERGELVRISEEVDPAWEINGLTRIGLQDRGPALLFENIKGADFPMVANLL
                     GTDERYLFSLGIDKWSDYNEEWIRRTEEFIPPRMVDSGPCQEEVIEGDDIDLHKICNT
                     VWHQFDAGEFPGTLGISITRGRNDGVLNAGIYRMHTLSNNTLGWGAPEYTHGRQHYME
                     YEHADEEMPMAVVTGYDPVVFIMGATRTPPGIDEFHIGGALRGEAIDMVASGADGIPV
                     PATSEFVFEGVIKPHHREIEGGFGEYTGYYGEARSNPAFEVRRITHRKKPIFLGAREQ
                     WEPSDSTLVNGKSSQAEAFKTVKSLVPGVLDMRCNVCFEAIVKIDKLFPGHPQQVMDA
                     VWGGTYSRYKHVIIVDKDVDIWDYTDVHWALSTNVRADRDVTISPRRAGQWLDPAVSL
                     REKGWQTQMGIDATLCTEEYEFWGEKSPRLVDDPEIVAKTLDKWGDKLSWRKS"
     gene            1863..2207
                     /locus_tag="QF359_02835"
     CDS             1863..2207
                     /locus_tag="QF359_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85875.1"
                     /translation="MDFDLFYLLLGTVFVNTLWWSSLNVLYGTNHHQGLAVVYSVTNA
                     LMLGIAYPLAASIGKPGVVAALLIIELILAIYTISKTLAFIQESGSALWMETVKPPLF
                     LIEQVKALISKA"
     gene            2313..>2611
                     /locus_tag="QF359_02840"
     CDS             2313..>2611
                     /locus_tag="QF359_02840"
                     /inference="COORDINATES: protein motif:HMM:NF013530.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJO85876.1"
                     /translation="MTAIQKIIVTGGAGYIGSHACKMLANSGFTPVVVDNLSTGFRWA
                     VQWGELEECDIRDGDKLSQIFERHNPVAVVHFAAKAYVGESVENPDIYYHNNVIGT"
BASE COUNT          673 a          620 c          683 g          635 t
ORIGIN      
        1 cacccgaggg gaagaaggtt cgaaggctag caaagttacg gcccacaata tattgagatt
       61 atcgccgtca agtgatggca cggaagtcta ttacagttca gaggtttcga tcaccggccg
      121 gctcggaaaa tttggtttcg gcgtgatgaa aaagaaagcc aaacgcctgg gtgaagaatt
      181 cgctgaaaat tttcgccagc gtatcgaaac cagcaacgtc aatgcaactg attcggaagc
      241 gatccccgcc ccaacgattc aaacaggaga aaacaaaaca atgggtaaag caaattggca
      301 agatatgagg gaatttatgg atgccctcga agaacgtggc gaactagtcc gcatcagtga
      361 agaggttgat cctgcttggg agattaacgg cctcacccgg attggtctcc aagatcgcgg
      421 tccggcgctg ttatttgaaa atatcaaggg agcagacttt cccatggtgg ccaatctctt
      481 aggcaccgat gagcgctatc tgttttccct cggcatcgac aaatggagtg attacaacga
      541 ggaatggatc aggcgaactg aagaattcat ccccccacgc atggtcgata gcggaccctg
      601 ccaggaagaa gtcatcgaag gcgacgatat tgatctgcac aaaatctgca acacggtttg
      661 gcatcaattt gacgccggag aatttcctgg cacgctaggt atttctatta ctcggggccg
      721 caatgacggg gttctcaatg ctggcattta ccggatgcat actttatcta ataataccct
      781 tggctggggt gcaccagaat acacccacgg ccgccagcac tatatggaat atgagcacgc
      841 cgacgaggaa atgccgatgg cggtggtgac cgggtatgat cccgttgtct tcattatggg
      901 cgcgacccgc acccctcccg gtatcgacga atttcatatc ggcggtgcac tgcgcggtga
      961 agcaatcgac atggtggcca gcggcgccga cggcatcccg gtaccggcaa ccagcgaatt
     1021 tgtttttgaa ggcgttatca aaccccatca ccgggaaatt gaaggcggct tcggcgaata
     1081 taccggttat tacggtgagg cccgctccaa tccggcgttc gaagtcaggc ggatcaccca
     1141 tcgcaagaag ccgatcttcc tgggtgcccg cgaacagtgg gaaccttcgg acagcactct
     1201 ggttaatggc aaatcttctc aagccgaagc cttcaagacc gtcaaaagcc tggtgccggg
     1261 cgttctcgat atgcgctgca atgtctgttt cgaggccatc gttaagatcg acaaattgtt
     1321 cccaggacac ccgcagcagg tcatggatgc ggtttggggc ggcacctatt cccgctataa
     1381 acacgttatt attgttgata aggatgtcga tatttgggac tacaccgatg tgcattgggc
     1441 actgtccacc aacgtccgcg ctgaccggga tgttaccatc agtccccgcc gcgccggcca
     1501 atggctcgac ccggcagtct ctctccgcga gaaaggctgg cagacccaga tgggtatcga
     1561 cgccaccttg tgcactgaag aatacgagtt ctggggtgaa aagtcgccgc gcctcgttga
     1621 cgatccagaa attgttgcca agaccctgga taaatggggc gacaagctta gctggcggaa
     1681 gagttaaacc cgccgagggc tatgaaggag tattgcgggt ggcacccaga aacaattggg
     1741 tcaccccgcg tcgcctttaa gaaatgcgga tgagagaaat ttatctagta acagataacg
     1801 cctctaatat cttgtccccc gtcatcgcct attgttgaaa gtgggcaggt gggcgggtaa
     1861 taatggattt tgatttattt tatttgctgc tggggacggt ttttgtaaat actttgtggt
     1921 ggagcagtct taatgtcctc tatggcacaa atcaccatca aggattagcc gttgtttatt
     1981 ctgtaaccaa tgcactgatg cttggcatcg catacccgct cgcggcttca ataggtaagc
     2041 caggagtagt tgccgcattg ctgatcatcg aattgatatt ggcaatttat accatttcaa
     2101 aaactttagc ttttattcaa gagagtggct ctgcgctatg gatggaaact gtgaagcccc
     2161 ctctatttct tattgaacag gtaaaggcat taatatccaa ggcttgatat ttcaattaag
     2221 aatcttgttg tcctttaaaa acaattgttt ttctcaattt tttcctcata taaaggacgt
     2281 atagtgcgga tagaaaaagc ggattaggat ttttgactgc aatacaaaaa ataatagtca
     2341 ctggaggcgc cggttatatc ggcagtcacg cctgcaagat gctggcaaat tccggattta
     2401 cgccggttgt cgtcgataat ctttcaactg gctttcgctg ggctgtgcag tggggtgaat
     2461 tggaagaatg cgatatccgc gatggtgaca agctaagcca gatatttgag cgccataatc
     2521 ctgtcgcggt ggtgcatttt gccgccaagg cctatgtcgg agaatcagtc gaaaaccccg
     2581 atatttatta ccataacaat gtcattggca c
//
LOCUS       DASCNL010000221         8323 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000499767, whole genome shotgun sequence.
ACCESSION   DASCNL010000221 DASCNL010000000
VERSION     DASCNL010000221.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 8323)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8323)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8323
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000499767"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..437
                     /locus_tag="QF359_02845"
     CDS             <1..437
                     /locus_tag="QF359_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85877.1"
                     /translation="RIKHWLSHGALPTDRVARFLGDANIIEKPVRAEQTKQHLPREKT
                     LEKLREKEEAQKAAQEAAAQEAEAAAAAPTEAEVVAEAEEAPAEEAPAEEVSVEEVPA
                     VEAPAEEVPVEEVPAEEAPAEEAPTEEAAGEEAPAEEENKNG"
     gene            443..1009
                     /gene="rimM"
                     /locus_tag="QF359_02850"
     CDS             443..1009
                     /gene="rimM"
                     /locus_tag="QF359_02850"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HJO85878.1"
                     /translation="MIKSSDKRPDVNRVCIGVVTGTHGLKGEVKLKSFTAEPRDVAAY
                     GPVANKSGEQSFEIRIISSSRKGLIAELSGVNDRNAAEAIQGTELYVSRDKLPELEED
                     EFYYSDLIGLPVEHIDGGAIGIVSLVDNYGAGEVMEVELKDGGTEMFLMSRDVVPEID
                     LENGRIVVNPPTEVYAGGAHDDNETEEK"
     gene            1009..1788
                     /gene="trmD"
                     /locus_tag="QF359_02855"
     CDS             1009..1788
                     /gene="trmD"
                     /locus_tag="QF359_02855"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HJO85879.1"
                     /translation="MASTGSQDNSSTGAAAEQAWQATVMTLFPEMFPGSLGQSLAGKA
                     LEDGIWTINTVDIREFAGDKHQTVDDTPFGGGAGMVMRADVIDAALKTVVDEGSDSSK
                     RPIVYLTPRGKPLDQARVKELAAMAGVILLCGRYEGVDDRVIEAWDMEEISLGDFVLS
                     GGEPAALTLIDACVRLLPGVMGSENSPEDESFEEGLLEYPHYTRPRVWGGQEVPEVLL
                     SGHHEKVRAWRQAEAEKITAERRSDLWQKYIAKDNLSSSKH"
     gene            1827..2228
                     /gene="rplS"
                     /locus_tag="QF359_02860"
                     /pseudo
     CDS             1827..2228
                     /gene="rplS"
                     /locus_tag="QF359_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388943.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
     gene            2438..3844
                     /gene="leuC"
                     /locus_tag="QF359_02865"
     CDS             2438..3844
                     /gene="leuC"
                     /locus_tag="QF359_02865"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004271955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HJO85880.1"
                     /translation="MSEAKTLYDKIWDAHIVDEQVDGTCLVYIDRHLVHEVTSPQAFE
                     GLRNSGRKVRRTDKTLAVADHNVPTTDRSAGIENEESRIQVEALEKNCADFDIELYSM
                     DDIRQGICHVVGPEQGFTLPGTTLVCGDSHTATHGAFGAMAFGIGTSEVEHVLATQTL
                     LLTKCRNMRVTVNGELPLGITAKDMILAVIGKIGTAGGNGAAIEFTGEAFQSLSMEGR
                     MTVCNMTIEGGARVGLFAPDETTFEYLKGRPKSPKAGAWETAVEYWKTLKTDERAVFD
                     EEIIMDAADIKPQVTWGTSPEDVTTIDGHVPNPADETDKNRRHKMERSLEYMGLEADM
                     AMKDIKIDTAFIGSCTNSRLEDMRAAAAVAKGRKIADGVRALVVPGSGLIKELAEQEG
                     LDKIFTEAGFEWREAGCSMCLAMNADKLVPGERSASTSNRNFEGRQGPGGRTHLVSPA
                     MAAAAAIAGHLTDVSDLD"
     gene            3862..4464
                     /gene="leuD"
                     /locus_tag="QF359_02870"
     CDS             3862..4464
                     /gene="leuD"
                     /locus_tag="QF359_02870"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HJO85881.1"
                     /translation="MDKFGKLTSVAAPLPLINIDTDMIIPARFLKTIKRTGLGADLFS
                     TLRFNEDGSDREDFVLNQPAYKNAEILVTGENFGCGSSREHAPWALMDFGIKCVIAPS
                     FADIFYNNSFKNGMLLIKLPPEDMTKLMDDAERGANATVTVDLEAQEITGPDGGVIKF
                     EINAFKKHCLLNGLDDIGLTLQKDDKIDDFEARQKAIQLW"
     gene            4495..5604
                     /gene="leuB"
                     /locus_tag="QF359_02875"
     CDS             4495..5604
                     /gene="leuB"
                     /locus_tag="QF359_02875"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HJO85882.1"
                     /translation="MPANKKLLFLPGDGIGPEIMTQVRRVIDWMDQRRSVTFDISEGL
                     IGGAAIDETGVPLPDETLEAAHGSDAVLMGAVGGPKWEVLPFEVQPERGLLGIRKELG
                     LFANLRPALVFDALADASTLKLDIVKGLDIMIIRELTGGIYFGEPRGVEDLGDGNRKG
                     FNTLTYTTPEIHRIGRVAMDLAAKRNKRVCSIDKANVLEATVMWREEMTKIGEEYPDI
                     ELSHMYVDNAAMQLVRNPKQFDVIVTTNMFGDILSDCAAMLTGSLGMLPSASLGAPDE
                     SGRQAALYEPVHGSAPDIAGQGIANPLAQILSFSMLLRYSFDMFEDADLVDQAVQNVL
                     DQGLRTGDIMGDGKTQVSTEAMGDAITKELDKLAA"
     gene            5693..6712
                     /locus_tag="QF359_02880"
     CDS             5693..6712
                     /locus_tag="QF359_02880"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HJO85883.1"
                     /translation="MGYKYAVVGATGNVGREIMNILSEREVLAADVTAVASSRSVGME
                     VSYGEDDVLKVHDLAAFDFEGTDIVLSSPGAKVSAEYALRAATAGAVIIDNTSHFRMD
                     PDVPLVVPEVNAHALADFRNKNIIANPNCSTIQLVVALKPLHDLAGIQRVVVSTYQSV
                     SGAGKSAMDELFNQTKGIYMNEPEYKFQENFPKSIAFNAIPQIDVFMDDGYTKEEWKM
                     VVETKKILDPEIRLTATCVRVPVFVGHAEAVNIEFDQPISTEEARDALREAEGVVVVD
                     HRAEEGYVTPTECAGEDPVYVSRIRDDITVENGLSLWVVADNLRKCAALNTVQIAETL
                     IRDYL"
     gene            complement(6815..7069)
                     /locus_tag="QF359_02885"
     CDS             complement(6815..7069)
                     /locus_tag="QF359_02885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85884.1"
                     /translation="MLPLDSLDFVKLVRTGDDNPNQYVSMIMVTGHSEQNKVTLARDA
                     GINEMLIKPLSARTLFARIRAVIERPQLCRNTVLFWPGSP"
     gene            complement(7073..7198)
                     /locus_tag="QF359_02890"
     CDS             complement(7073..7198)
                     /locus_tag="QF359_02890"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85885.1"
                     /translation="MRIILKQLLCALGVMEMAEATDGAQAFSVMKTFEPDIIIIG"
     gene            7695..7880
                     /locus_tag="QF359_02895"
     CDS             7695..7880
                     /locus_tag="QF359_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85886.1"
                     /translation="MIIRWSGHQSFTTLLILWFDLVVAITGPKSLAAITVDPSDLNQS
                     ATPGRRGKPPAPKVLRT"
BASE COUNT         2205 a         1873 c         2300 g         1945 t
ORIGIN      
        1 aacgtataaa acactggtta tcgcacggag ctttgccaac ggatcgggtt gcgcgctttt
       61 taggcgatgc aaacatcatt gaaaaaccgg ttcgggcaga gcagaccaag cagcatttgc
      121 cgcgtgaaaa aactttggag aagttgcgcg agaaagaaga agcgcagaag gcggctcagg
      181 aagcagcagc tcaagaagcc gaagcagcag ctgctgcacc aaccgaagcc gaagttgttg
      241 ctgaagcaga agaagcgcca gccgaagaag caccggcaga agaggtgtct gttgaagaag
      301 ttccagccgt agaagcaccg gctgaagagg tgcctgttga agaagttcca gccgaggaag
      361 caccggctga agaagcgcct actgaggaag ctgctggcga agaagcacca gctgaggagg
      421 aaaataaaaa cggctgatat ttatgataaa atcttcggac aagcggcctg acgtaaaccg
      481 cgtttgtatc ggtgttgtga ctgggacaca cggcctgaaa ggggaggtaa agctcaaaag
      541 ctttaccgcg gaacccagag atgtcgcagc ttatgggccg gtagcgaata aaagcggtga
      601 gcagagtttt gaaattcgta ttatcagtag tagtcgaaag ggtttgattg ctgaattaag
      661 cggagttaac gatcgcaacg ctgctgaggc tatccaaggg acagagctct atgtgtcccg
      721 ggataaattg ccggagttgg aagaagacga gttctactat tcagacctta tcggtctgcc
      781 ggtggaacat atagatggag gcgcgattgg cattgtgagt ttggttgata actatggtgc
      841 tggagaagta atggaggttg agttgaaaga cggaggaaca gagatgtttt taatgtcccg
      901 ggacgtggtg ccggaaatcg atctcgaaaa tggacgaatt gtggttaatc cgccgaccga
      961 ggtttatgcg ggtggggccc acgatgataa cgaaacggaa gaaaagtaat ggcaagtact
     1021 gggtcgcaag ataactcatc aactggcgct gccgctgaac aagcgtggca ggcgacggtg
     1081 atgacgttat ttccagaaat gtttccggga tcgttggggc agtcacttgc cggtaaggcg
     1141 cttgaggatg gcatatggac aattaatacg gtggatattc gtgaatttgc cggtgacaaa
     1201 catcagaccg ttgacgacac gccttttggt ggtggtgctg gtatggtgat gcgggctgat
     1261 gtcattgatg cggcacttaa aaccgttgtt gacgaaggat ctgatagttc caaacgtccg
     1321 attgtatatc tgacgccgcg tggtaaaccg ctggatcagg ctcgggttaa agaattggcc
     1381 gcaatggcag gcgtcatatt gctatgtggc cgttatgaag gagttgatga ccgggtgatt
     1441 gaagcttggg atatggagga aatcagtctt ggcgattttg tcctctccgg cggtgagccg
     1501 gcagcgctca ctttaattga tgcttgtgtg cgtctgttac caggcgttat gggcagtgag
     1561 aactcacccg aggacgaaag ttttgaagag ggattactgg aatatcccca ttacacccgc
     1621 ccccgtgtat ggggcggcca ggaggtgccg gaagttttgc tatccggtca ccatgagaaa
     1681 gtgcgggctt ggcggcaagc cgaagcagaa aaaattacgg ctgagagacg gtctgatctt
     1741 tggcaaaaat atatagctaa ggacaatttg tcttccagca aacactgata acggaattta
     1801 gaacacttat agttgaggat aagatgatga atatattgca agaattagag caagagcaga
     1861 ttgccaagct agcggctgaa aagacgatgc cggattttgc acccggcgat accatcaagg
     1921 ttagcgtaaa agtggttgag ggtacccgcg aacgtatcca ggcttacgaa ggcgtttgca
     1981 ttgcccgcaa gaatgatggg ctgcattcct ccttcacggt acgtaagatt tcttacggtg
     2041 aaggtgttga gcgcgtattc ccgctgtatt cgccaaatgt cgatagcgtg gaagtaatcc
     2101 gccgcggtga tgtgcgccgg gcgaagcttt actacttgcg tggtcgtcaa ggcaaacgcg
     2161 cccgtattgc tgagcgtact gatggctatg cggctaaact atcagctgag gaacggcaat
     2221 tagctcaggc tgagaaagaa gtcgctaagt ctgcagcgcc gaagaaatcg gctaagccaa
     2281 aagccgaaga agctccggtg aaagcagttg aagaagctgt cgaggagcag gtggaagagc
     2341 aagtggaaga gcaagtggaa gaaaagaccg aagattaaat tcggtcactt ttccggcgcg
     2401 ttttattgat ccgattatta taagtgagcc aacattgatg agcgaagcaa agactcttta
     2461 cgacaaaatc tgggatgccc atattgtcga tgaacaagta gatggaacct gtctggtcta
     2521 tatcgaccgt catctcgtgc atgaggtgac gtcgccgcaa gcctttgaag gtctgcgtaa
     2581 tagcggacgg aaagtgaggc ggaccgataa aaccttggcc gttgccgatc acaacgtgcc
     2641 gacgacggat cgtagtgccg ggattgaaaa cgaagagtcg cgaattcaag tcgaagcgct
     2701 cgagaaaaac tgtgctgatt ttgatatcga actttattca atggacgata tccgtcaagg
     2761 catctgccat gttgttggac ccgagcaggg ctttactctg ccgggcacga ccttggtttg
     2821 cggcgattct cacacggcaa cccatggtgc atttggcgct atggctttcg gcattggcac
     2881 ctctgaggtt gaacacgttc ttgcaacgca aactttgctg ctgacgaaat gccgcaatat
     2941 gcgggtaacc gttaatggcg aactgccgct tggcatcacc gcaaaagaca tgattcttgc
     3001 ggtgattggt aaaatcggta ccgccggcgg taacggtgcg gcgattgaat ttaccggcga
     3061 agcttttcag tccttgtcga tggaaggccg catgacggtc tgtaatatga ccattgaagg
     3121 cggtgcacgg gttggcctgt ttgcaccgga tgaaacgact tttgaatatc tcaaaggccg
     3181 tccgaagtca cccaaagcag gtgcctggga aacggctgtg gagtattgga aaacgctgaa
     3241 aacggacgaa agagcagtct tcgatgaaga gatcattatg gacgccgctg atattaaacc
     3301 tcaggtaacc tggggtacgt caccggaaga tgtcacgacg attgatggtc acgtgccgaa
     3361 cccggcggac gaaaccgaca agaaccggcg ccacaaaatg gagcgttcgc tcgaatatat
     3421 gggcctcgaa gccgatatgg cgatgaaaga tattaaaatc gacacggcgt ttattggttc
     3481 ctgcaccaac agccggctcg aagatatgcg ggcggccgcg gcggttgcca aaggccgaaa
     3541 aattgctgat ggcgtccgcg ccctggtcgt cccgggttcg ggtttgatta aagagctcgc
     3601 cgagcaggaa ggcctcgata agatctttac cgaagccggc ttcgaatggc gggaagcggg
     3661 ttgctcgatg tgtctggcga tgaacgctga taaattagta ccgggtgaac gctcggcctc
     3721 gacgtcgaac cggaattttg aaggccgtca aggacctggt ggccgcaccc atttggtgag
     3781 ccctgccatg gcagctgcag cagcgattgc cggtcatctg accgatgtca gcgatttgga
     3841 ttagggaaga ggaaaagcat tatggataaa tttggaaaac tgacatctgt cgccgctcct
     3901 ctgccgttga tcaatattga taccgacatg attattccgg cacggttctt gaagacgatc
     3961 aaacgcaccg ggctaggcgc tgatttgttt agcacgttgc gctttaacga agacggcagt
     4021 gaccgtgaag attttgtgct taatcaaccg gcttacaaaa acgccgaaat tttggttacc
     4081 ggtgaaaact ttggttgtgg ctcgtcgcgt gaacatgcac cttgggcact aatggatttt
     4141 ggcattaaat gtgtcatcgc accaagcttt gctgatattt tttacaacaa cagcttcaag
     4201 aacggcatgt tgctgattaa attgccgccg gaagacatga caaagttaat ggatgatgcc
     4261 gagcgcggcg ccaatgcgac agtgacggtt gatctggaag cccaggaaat aactggtccg
     4321 gatggcggcg tcattaagtt tgagattaat gcctttaaaa agcattgcct gctgaacggt
     4381 ctcgatgata ttggactgac gctgcaaaaa gacgacaaga ttgatgattt cgaagcgcgc
     4441 cagaaagcca ttcaactttg gtaattgaat tgactaaata aagagagaga ataagtgcca
     4501 gctaataaaa aacttttgtt cttgccgggt gacggcatcg gtcctgaaat catgacccag
     4561 gtccgccgtg tcattgattg gatggatcaa cggcgttcgg tgaccttcga tatttccgaa
     4621 ggcctgatcg gaggtgccgc cattgatgaa acgggtgtgc ccttgccgga tgaaactctg
     4681 gaagcggcgc acggttccga tgctgtcttg atgggtgccg tcggtggacc gaaatgggaa
     4741 gttttgccat ttgaagttca gcccgagcgc ggcttgttag gtatccggaa agaacttggc
     4801 ctgtttgcca atctgcgtcc ggccctggtg tttgacgcct tggccgatgc ctcgaccttg
     4861 aagctcgaca tcgtcaaagg cctcgatatt atgattattc gcgagctaac cggtggtatt
     4921 tacttcggcg aaccgcgcgg cgttgaagat ctcggtgacg gcaatcgcaa aggctttaat
     4981 acgctaactt acacgacacc ggaaattcac cgtattggcc gggttgccat ggatttggca
     5041 gccaagcgta acaagcgggt gtgctcaatc gataaggcca atgtgttgga agcaacggtc
     5101 atgtggcgtg aggaaatgac caagattggt gaagaatatc ccgacatcga gctcagccat
     5161 atgtatgttg ataacgcggc catgcaattg gtgcgtaatc ctaagcagtt cgatgttatc
     5221 gtgacgacca atatgtttgg tgacatcttg tctgattgtg cggcgatgct gacgggctcg
     5281 ctcggcatgt tgccttcagc ctcgcttggc gcaccggatg aaagtggccg ccaggctgct
     5341 ttatatgagc cggttcatgg ctcggcaccg gatattgccg gtcagggtat tgctaatccg
     5401 ttagcacaaa ttctcagctt ctcgatgttg ctgcgttatt cttttgacat gtttgaagat
     5461 gctgatctgg ttgatcaggc tgttcagaac gtgctcgatc aaggtttgcg gacaggtgac
     5521 attatgggtg acggcaagac ccaggtttct accgaggcca tgggtgatgc gatcaccaag
     5581 gagctcgata aactagcggc ttaaatatct gccccttgaa atgagaatca ctgcaagagg
     5641 gggcgtgaat aaacgctccc ttttaagtat tgggggcaaa tggagaacta aaatgggtta
     5701 caaatatgca gttgttggtg cgaccggcaa tgttggacga gagattatga acatcctgtc
     5761 ggagcgggaa gtgctggcgg cggatgtaac ggcggtggcg tcatcacgct cggtcggcat
     5821 ggaagtctct tacggcgaag atgacgtctt gaaagtgcac gatctggcgg cctttgactt
     5881 cgaaggtact gatattgtgc tctcaagccc gggcgccaaa gtctcagctg aatatgcact
     5941 gcgagcagcg acggcagggg cagtgattat cgacaatacc tcgcattttc gcatggaccc
     6001 agacgtaccc ttggttgtgc cggaagtaaa cgcccatgca ctcgccgatt tccgcaataa
     6061 aaatattatt gctaatccca attgctcaac cattcagttg gtggtggcgc tcaaaccctt
     6121 gcacgatctg gcaggcatcc agcgcgtcgt cgtttcgact tatcagtccg tctcgggcgc
     6181 cggcaaatcg gcgatggatg agctgttcaa ccagaccaaa ggtatctaca tgaacgaacc
     6241 ggaatataaa tttcaggaaa atttcccgaa atcgattgcc tttaatgcga tcccgcaaat
     6301 agatgtgttc atggatgacg gctatactaa agaagaatgg aaaatggtgg tcgagaccaa
     6361 aaaaattctc gatcctgaaa ttcgcctgac cgcaacttgc gtgcgggtgc cggtttttgt
     6421 cggccatgct gaggctgtca atattgagtt cgaccagcca atctcaaccg aagaagcgcg
     6481 cgacgctctg cgtgaagccg aaggtgtcgt cgtcgtcgat caccgggccg aggaaggtta
     6541 tgtcacgccg accgaatgcg ccggcgaaga tccggtttat gtcagccgaa tccgcgatga
     6601 tataacggtt gagaatggtc taagcctctg ggtggtggca gataatttgc gcaaatgtgc
     6661 tgccctcaat acggtacaga tcgccgagac gctgatccgc gactatctgt aaacgttaat
     6721 tttcgtaaag gtgtcaggca ccttttgaaa aattaaggat ttgggctagt cgaacatcgc
     6781 gtcgacatcg gcttgagatt gttcatcttc cgccttacgg cgatccgggc caaaatagga
     6841 ccgtgtttcg acaaagctgg gggcgctcga tgacggcacg gatacgggca aacaacgtcc
     6901 gggctgaaag cggtttaatc agcatttcgt tgatgccggc atcccgtgcc agagtgactt
     6961 tgttttgttc ggaatgaccg gttaccataa tcatcgacac atattggttc gggttgtcat
     7021 caccggtgcg tacgagcttg acgaaatcaa gactatctag aggcagcatt tcctagccga
     7081 tgataatgat atcaggctcg aaagttttca tgaccgagaa tgcttgggcg ccgtcggtgg
     7141 cttcagccat ttccatgaca cccaaagcgc acagcaattg cttcaagata atccgcataa
     7201 agggattgtc tccaacgatc aaaaacttaa ccgcactact ctatatacat aaataggtat
     7261 tggtcacgat atacataaat aggtattagt cacgagactt aaaagaaata aaggataaaa
     7321 ttcacccgtt aaaacacatc agtataattt aaactaattt agttaaaaat ttaggaagaa
     7381 aaaagaacac caataataac cggaaaatta agaggcgcca ggcacgcaag gcctgggatc
     7441 cttgtcgtga cgcatcgcgg cggcgatact cctgacgcct catagagccg gccaggctcc
     7501 gagtacgatt aatagtcttc tgctccaccg gcttcctcgc aacgcgccct tgggagagag
     7561 gtagtcgcaa gttgcccaat gtgtttggtc taaaatccgg ctgttgccag tcggatcata
     7621 taccgtaccg gtcagcggcc caatttaacg ggcttgccct atttcataac gcaacgcact
     7681 gaccgagaag tagaatgata atccgttggt caggccacca aagcttcacc accctactga
     7741 tcctttggtt cgatttagtg gtggctatca cgggaccgaa atctcttgct gccatcaccg
     7801 tcgatccctc ggacctcaat caatccgcca cgccagggag acgaggcaaa ccgccggcac
     7861 ccaaagtcct cagaacttga ttttcagttt tacctgaagt ccgcaaagcg aatcccaagt
     7921 tattagctaa aaaccattcc cttggtgcac gcctcaaaag aagcccaccc caatggagac
     7981 cacttctcta aaagtaaact tccaaagaag tgcgttcgaa aggcctccag ctacgcctcc
     8041 aaatcggcaa acgactctcg cgaatcacct gctttcttga agttgctttt ctagcctcct
     8101 atgcccaact tagcgatcat tctgatgaaa gaccggtaaa tcaggtgcca actcggcgcg
     8161 aaaaagcaat aaagacgctt tcacgtacac ggaatattct gggtaaagtg aaataaatgt
     8221 tcaataaaaa aatagttaaa atataaaaaa actgtgtata aattggatat atttgcacaa
     8281 atagttcaca acttatccac aattgtatca acaattcaat aat
//
LOCUS       DASCNL010000222         1716 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000504110, whole genome shotgun sequence.
ACCESSION   DASCNL010000222 DASCNL010000000
VERSION     DASCNL010000222.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000504110"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1219)
                     /locus_tag="QF359_02900"
     CDS             complement(<1..1219)
                     /locus_tag="QF359_02900"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO85887.1"
                     /translation="MFEVNTAVLLVVSLIGLVVIGVHIAIALGMTSALGIWLVTGADM
                     NAFHTVQTMLAATAYEAIRAYVFAVIPLFMLMGEFIGKSGTVTDVYRGINRLLKRIPG
                     RLAIATVMGNALFSFVTGVSIASAAAFSRIAYPEMKRFGYHKGFALGAIAGSSCLGML
                     IPPSVLMIVWGILTEQSIGQIFAAGVFPGLLLASLFIVYVFIRAILNPDLVGGGAGAD
                     IEVEEVEEVPTGQFMVSLAGIILVIVAVLGGIWFGFFTPTEGAGAGAFIGLMLGIIKG
                     MRFKDIVESILSVGKTSAPILLLLVTAALYSRTLAMTGMANAIESVFLGSGMEPWMII
                     TVMVLIWFALGMIIDSISIMLLTAAIFAPIAVKMGFDPIAFAVIGIIAIEAGLYTPPF
                     GLLVYTVKSAIQAF"
     gene            complement(1250..>1716)
                     /locus_tag="QF359_02905"
     CDS             complement(1250..>1716)
                     /locus_tag="QF359_02905"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO85888.1"
                     /translation="WAFGLSFLVLGNIIGRGVFDTPIYGTAEMVAASIVIIVFLQVGY
                     AIRSRSMLKADFLVTHLPEGVQRTLLAFGYLLGAAFFLMIITGGWEESILSYVENEFE
                     GEGALRVPSWPARWTVLLGSALAVVNYAVLAYIDIFKPEMLDSEADPNAAQH"
BASE COUNT          508 a          479 c          409 g          320 t
ORIGIN      
        1 caaacgcctg gatcgctgat ttcaccgtat aaaccagcag tccgaaaggc ggtgtataga
       61 gtccggcttc gatggcgata atgccaataa cggcaaaggc gatcggatcg aaacccattt
      121 tcacggcgat gggtgcaaag atggctgcag tcaataacat aatcgaaatt gagtcgataa
      181 tcatacccag cgcaaaccag atcagcacca tcactgtgat gatcatccag ggctccatac
      241 cggaacctag aaacacgctt tcaatggcat tagccatgcc ggtcatggcg agggtgcggg
      301 aataaagtgc cgccgtcacc agcaacaaca aaatcggcgc cgaagtttta cccactgata
      361 aaatagattc aacaatatct ttaaagcgca tacccttaat gatgcccagc atcaggccga
      421 taaaagcacc cgcaccggcg ccttcggttg gcgtgaaaaa gccgaaccaa atgccgccca
      481 agaccgcaac aattaccagt attatgccgg ccaagctgac cataaactgg ccggtcggaa
      541 cttcctctac ttcctcgact tcgatatctg cacccgcgcc accgcctacg aggtcgggat
      601 tcaagatcgc ccggatgaag acatagacaa tgaaaagcga tgccagcagc aaacccggga
      661 acacgcctgc ggcaaaaatt tgaccaatcg attgctcggt cagaataccc cagacaatca
      721 tcaagacact cggtggaatg agcataccga gacagctcga cccagcaatg gcgccaaggg
      781 caaatccttt gtggtagccg aaacgcttca tttccggata agcgatgcgg gaaaaggccg
      841 cggccgaggc aatgctgaca cccgtcacaa aggagaacag cgcattaccc atcaccgtgg
      901 cgatggcgag gcgaccaggt attcgtttca ggagccggtt aataccccgg taaacatcgg
      961 taaccgtccc tgatttacca ataaattcgc ccatcagcat aaacagcggg atgacggcga
     1021 aaacataggc gcggatggct tcataagcgg tcgcggccaa catggtttgc acggtatgaa
     1081 acgcgttcat atctgctcct gtgaccagcc agataccgag cgcactggtc atgccgagcg
     1141 caatggcgat atggacgccg atgaccacca gcccgatcag agaaacaacc agcaaaacgg
     1201 cagtattaac ttcaaacacg atctttatcc ttaaattttg ctgattgcat tagtgttggg
     1261 ccgcatttgg atcggcctct gaatccaaca tttctggctt gaaaatatcg atataggcca
     1321 aaacagcata attcactacc gcgagcgcgc tacccagcag cacggtccag cgtgcgggcc
     1381 aggacggcac ccgaagtgca ccctcccctt caaattcgtt ttcaacgtaa gataagatgc
     1441 tttcttccca accgccggtg atgatcatca agaaaaaggc cgcacccagc agataaccaa
     1501 aggccagcaa agtacgctgc acgccttccg gcagatgagt gaccaaaaaa tcggctttga
     1561 gcatggagcg gctacggatg gcgtaaccta cttgtaaaaa tacaataata acaatcgaag
     1621 ccgcgaccat ttcagcagta ccatagattg gcgtatcaaa gacgcctcgg ccgatgatgt
     1681 tgcccaacac caaaaatgac agcccgaaag cccaag
//
LOCUS       DASCNL010000223         2987 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000513575, whole genome shotgun sequence.
ACCESSION   DASCNL010000223 DASCNL010000000
VERSION     DASCNL010000223.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000513575"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            224..1240
                     /locus_tag="QF359_02910"
     CDS             224..1240
                     /locus_tag="QF359_02910"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO85889.1"
                     /translation="MKTITTGVLLAGAAALLTVTNVKAETVMKFSSWAPPTHPQNSQV
                     FPLWGKRIEAATQGRVKWKIEYKLASPPKQFEVSRDGIADASWIFHGYNTRYLATQAV
                     EIPGLGGTAETASYATQKAFDSHLHKANEHRGVAVAAMFSHGDAVIHTKKQIRSLADL
                     KGMKIRVPGGVGSLVGKQLGVVAVKAPAPKVYEILSSGVADGVFMPVEVQKTFRLKEV
                     VPYVTFMPGGLYYGSFAVLISPAFLDKLSAQDRKAVLSTTGTSLSRAIGKIWEHGDVV
                     GLADAKKFGSKIQTAGSAMLSEYKGITAKVEANWLSKMAKKYKNVDAKAALAEVRAAV
                     ASYK"
     gene            1237..1800
                     /locus_tag="QF359_02915"
     CDS             1237..1800
                     /locus_tag="QF359_02915"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO85890.1"
                     /translation="MSDTPEIMDVKSGENAAANMLRRLTDGTSSLFLFAMMVMTCIDV
                     VGRYVFNSPLNGATELTELFMGILIFAVLPTVSFREEHVSVDLMDLWFPVKLINARQL
                     LINVLATIMMATVAWRMWIFALKAVDYGDTTEYLAIQYAPIYFFISLTCAATSIALLL
                     NIPRYIKGQGPLSPGHVESDHDDLKST"
     gene            1832..>2987
                     /locus_tag="QF359_02920"
     CDS             1832..>2987
                     /locus_tag="QF359_02920"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO85891.1"
                     /translation="MTEALIGFAILIVFVFLRIPIAFAMGLVGVAGFAFLSGWGPSLA
                     MVGTRFSETALSYELSVVPMFILMGNLVSKAGLSAELFGASHAFLGHRRGGLSMATIV
                     ACGGFSAICGSSLATAATMSKIAYPEMRRYGYAESLSTASIAAGGTLGILIPPSVILV
                     IYGLMTETSIRELFAAGFLPGFLGILLYLCAVQFVVWRNPEAGPRVAKMDWVERMQAL
                     KGVWGTVLLFILVIGGIYGGIFTPTEAAGVGAGGGFLLALARGVRSFRDYFEVLVDSA
                     RTSAMLFTVLFGAMIFSNFVNRAGLPDGLLNMVTGFDVSPLVVIFIIVAIYIVLGCIF
                     ESLSMLLLTIPIFFPVIKGLGYEGMGEEAILVWFGIVAVVVTEISLITPPV"
BASE COUNT          699 a          711 c          748 g          829 t
ORIGIN      
        1 gtgcgagtgg cgttttaaca acagtgaccc gtcaaaccaa ttatcacaat taagacaatg
       61 ggttaaaggt cacatgggct aattaactgg gacagcccct aatattttta ttgatttgag
      121 acaaactatt ggcaaccgct ttaaattcaa gctacaaact taaattaata aagtctaatg
      181 ccggcaataa agtcgggagg cttaactaac taggagacga aaaatgaaaa caataaccac
      241 gggagtatta ctcgctggtg ccgcagcttt gttaacagtg acaaatgtta aggctgaaac
      301 agtgatgaaa ttcagtagct gggcgccccc gacccatccg caaaattccc aagttttccc
      361 gctatggggc aaacgaattg aagctgctac ccaaggccgc gttaaatgga aaattgaata
      421 caaattagct tcaccaccga aacaattcga agtttcgcgg gatggcattg ccgacgcctc
      481 ctggattttc cacggctaca acacccgcta tcttgccacg caagcagttg aaattccggg
      541 tcttggcgga acggcggaaa ctgcttctta cgccacccaa aaagcttttg atagccatct
      601 gcataaagcc aatgaacacc gtggcgttgc tgtcgctgcc atgttttctc acggcgatgc
      661 agttatccat accaaaaagc agattagatc acttgctgat cttaaaggca tgaaaattcg
      721 tgtgccgggc ggcgtgggca gtttggttgg caaacaactt ggtgtcgttg cggtgaaagc
      781 accagcacca aaagtttatg aaatactgtc ttccggcgtg gctgacggtg tctttatgcc
      841 tgttgaagtt caaaaaacct tccgtcttaa agaagtcgtg ccttatgtca cgtttatgcc
      901 aggtggctta tactatggta gctttgccgt tctcataagc ccggcattcc tcgataaatt
      961 atcagctcaa gaccgtaaag ctgttctcag cacgaccggt accagcctct caagagctat
     1021 tggcaaaatt tgggagcacg gtgatgtcgt tggtttggca gatgccaaaa agttcggtag
     1081 caaaattcaa actgctggca gtgccatgtt gtctgagtac aaaggtatca cggctaaagt
     1141 cgaagccaat tggctgagta aaatggccaa aaagtataaa aacgtcgatg ccaaggccgc
     1201 tttggctgaa gtgcgtgccg ctgttgccag ttacaagtga gcgacacgcc tgaaataatg
     1261 gacgttaagt ctggagagaa cgccgcggca aatatgctgc ggcgtctcac cgacggcacc
     1321 tcgtctttgt tcctttttgc catgatggtg atgacctgca tcgacgtggt tggacgttat
     1381 gttttcaact cgccgctgaa cggtgcgacc gaactcaccg aattattcat gggcattctt
     1441 atttttgccg tcctgccgac cgtcagtttc cgagaagaac atgtatccgt cgatctgatg
     1501 gatttgtggt ttccggtaaa attgattaac gcccgccaat tactgatcaa tgtgttggcc
     1561 acgattatga tggcgacggt agcttggcgc atgtggattt ttgcattgaa ggcggttgat
     1621 tacggcgata cgaccgagta tttggcgatc caatacgcgc cgatttattt ttttatttcc
     1681 ttaacatgtg ctgcaacttc tattgcgctt ttactcaata tcccgcgcta tataaaaggt
     1741 caggggccac tatcacccgg tcatgttgaa tcagatcatg acgacctaaa atcaacttaa
     1801 tttatgattt aaccagtaga tcggactgcc agtgactgaa gcccttatcg gatttgccat
     1861 ccttattgtt tttgtttttc tacggatacc tatcgcattt gccatgggtt tagtcggcgt
     1921 tgccggcttt gctttcctta gcggctgggg accttcattg gctatggtcg gcacacgctt
     1981 ttccgaaacc gccctgagtt acgaactgtc ggtcgtaccg atgtttatcc tgatgggtaa
     2041 tttggtctct aaagccggac tatcagctga attatttggt gcctcgcacg cttttcttgg
     2101 tcaccgccgg ggcggcctgt cgatggcgac catcgtcgcc tgcggcggct tcagcgcgat
     2161 ctgcggctca agcctggcaa cggctgccac catgtcgaaa atcgcctatc ccgaaatgcg
     2221 ccgttatggc tacgctgaaa gcctatcgac cgcctcaatt gccgccggag gcacgctggg
     2281 tattttgatc ccacccagcg ttattctggt tatttatggc ctcatgaccg aaaccagcat
     2341 ccgtgaactg tttgccgccg gattcttgcc aggatttcta ggaattttac tctatctttg
     2401 tgccgtacag tttgtcgtct ggcgaaatcc tgaggccggc ccccgcgttg ccaagatgga
     2461 ttgggttgaa cgcatgcagg cgctcaaagg agtttggggc accgtgctgt tgtttattct
     2521 ggtgatcggc ggcatctatg gcggtatttt cacaccaacc gaagctgcag gtgtcggcgc
     2581 gggcggtgga tttttgctag cgctcgccag aggtgtgaga agcttccgcg actattttga
     2641 agttctggtt gatagcgccc gaacttccgc catgctgttc acggtgctgt ttggcgctat
     2701 gattttttca aatttcgtca atcgcgccgg tctgccggat ggcctattaa atatggttac
     2761 cgggtttgac gtgtcgccac tcgtggtaat ttttattatc gtcgcaattt acattgtact
     2821 cggctgcata tttgaaagtc tgtcgatgct attgctcacc atcccaattt tcttcccggt
     2881 tattaaggga ttgggttatg agggcatggg cgaagaagcg atcctggtgt ggtttggaat
     2941 tgttgctgtc gtcgtcaccg aaatcagttt gatcacgcca ccggtag
//
LOCUS       DASCNL010000224         3471 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000515254, whole genome shotgun sequence.
ACCESSION   DASCNL010000224 DASCNL010000000
VERSION     DASCNL010000224.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3471)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3471)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3471
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000515254"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1178
                     /gene="hisD"
                     /locus_tag="QF359_02925"
     CDS             <1..1178
                     /gene="hisD"
                     /locus_tag="QF359_02925"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HJO85892.1"
                     /translation="AALKDYSEKFDNWRPDNFQVSRAEIDVCYDQVTEQNIEDIEFAQ
                     AQVRGFAEIQKAALIDVEQETLPGVILGHKNIPVNSVGCYVPGGKYPMVASAHMSVVT
                     AKVAGVKRIAACAPPYEGKPNPAIVVAQDMAGADEIYCLGGVQAMGAMALGTDEIGTV
                     DMLVGPGNAYVAEAKRQLFGRVGIDLLAGPTETLIIADESVDGELCAADLLGQAEHGP
                     TSPAVLLTDSKALAQDTMKEVERQLDILPTGEVARAAWETYGQVIVCDNDEEMLQEAD
                     RIASEHVQVMTKDPNYFLNNMTNYGALFLGPETNVSYGDKVIGTNHTLPTKGAGRYTG
                     GLWVGKFIKTHTYQRITEDASVEVGKYCSRLCALEGFAGHKEQADIRLRRYAGVNEG"
     gene            complement(1299..>3471)
                     /locus_tag="QF359_02930"
     CDS             complement(1299..>3471)
                     /locus_tag="QF359_02930"
                     /inference="COORDINATES: protein motif:HMM:NF015155.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HJO85893.1"
                     /translation="LFNSSDANIEEMINDMPSLEKPGIDRAEAKDELINSPIYRDLIV
                     SADGRTAGLLLGLVEDEQYNHLLKSRDELRAKKRHTGLSAEETRTLKRITAEYDQVNE
                     ARNEQRHLDIAHIRDIIEPYRQHGVLHLGGLPMITDDMLTFVRNDLIVFGGGVLAFLI
                     IILTAIFRKLRWIVLPLFSSFYSGFIMIGVLGLIGWKVTVISSNFLALMLIITISMNI
                     HLIVRYLQLHRDHPDDDQLTLVRTTTHKMVRPCLYTALTTIIGFGSLVVSDIKPVIDF
                     GWMMSAGLAVTFATSFLLFPTLLLVIGKIESKATVDSDRFFLPGYLARLTEFQGNKIL
                     VLAVMLTVVSIAGITLLRVENSFINYFSDDTEIYQGLKLIDEKLGGTTPLEILVKLED
                     DMEELTPEDLKEMTPEEIQEEREYLEMLRTKPELWFTPTKVELIKKAHDYLDRLPEIG
                     KVLSFASSVRVAESYAEKQLDGMELSLLYTKLPASVKKTLIEPFVSIDDNEIRLMARV
                     LDSKPDLRRKELLETVRRDLGKIHGFEQLATYKPLIKDVTVSGLLVLYNNMLQSLFTS
                     QIKTIGVVMLGIAFMFLVLFRSITLSIIGILPNLLGAVVVLGVMGWSEIPMDMMTITI
                     AAIAIGIAVDNGIHYIYRFREEYARTHSYVETLHICHSNIGKAVFYTTMTVIFGFSIL
                     MLSNFIPTIFFGVLTGAAMFIALLAALTVLPKLILLWKPFG"
BASE COUNT          870 a          874 c          920 g          807 t
ORIGIN      
        1 atgcagccct aaaggattat tcagaaaaat tcgataattg gcggcccgat aattttcaag
       61 tcagtcgcgc tgaaattgat gtctgttatg accaagtgac ggaacaaaac atcgaagata
      121 tcgaattcgc tcaagcgcag gtccggggct ttgccgaaat tcaaaaagcc gccttgattg
      181 atgttgagca ggaaactctg ccgggcgtga tcctcggaca taaaaacatt ccggtgaact
      241 cggttggctg ctatgtgcca ggcggcaaat acccgatggt ggcgtccgcc cacatgagcg
      301 tggtgacggc caaagtcgct ggcgtgaagc gtattgcggc ttgcgcgccg ccttacgaag
      361 gcaaacctaa cccggccatc gtcgtagccc aagatatggc aggtgccgat gaaatttatt
      421 gcctgggcgg tgtccaggcg atgggggcga tggctttggg tacggatgaa attggcaccg
      481 ttgatatgct ggtcggaccg ggtaatgcct atgtcgccga agccaagcgc cagctgtttg
      541 gccgggttgg cattgattta ctggctggac cgaccgagac attgatcatc gccgacgaaa
      601 gcgtcgatgg tgagctctgc gctgctgatc tgctgggtca ggccgaacat ggcccgacca
      661 gcccggcggt gttgttaacc gattcaaaag cgctggcgca agacacaatg aaagaagtcg
      721 aacgccaact cgatattttg ccaaccggtg aagtggcgcg ggcggcctgg gaaacttacg
      781 gtcaggtaat cgtctgtgac aacgacgagg aaatgctcca agaggcggac cgaatcgcct
      841 ccgagcatgt tcaagtgatg accaaagacc cgaattactt cttgaacaat atgaccaatt
      901 acggagcact gttcttaggt ccagaaacca atgtctccta tggcgataaa gtcatcggca
      961 ccaatcacac cttgccgacc aaaggagccg ggcgttacac cggcgggctt tgggtgggta
     1021 aatttatcaa aacccacaca tatcagcgca ttactgaaga tgcctcggtt gaggtcggta
     1081 aatattgctc caggctgtgc gcgctggaag gcttcgccgg ccataaagaa caagctgaca
     1141 tccgcctccg ccgctacgcc ggcgttaatg aggggtaggt aactcacaac tcatctgtca
     1201 caacggactt gaaagttttt cggggacatc ttcttggcac atcaaacatg ccctggcgtg
     1261 atgatatgat cacccgcctg ccggcgttta atccggcatc agccgaatgg tttccatagc
     1321 aaaattagct ttggcagcac cgtgagtgct gctaaaaggg cgataaacat tgccgccccg
     1381 gttaacacac caaaaaagat agtggggatg aagttggaca acatcaagat ggagaagccg
     1441 aagatgacgg tcatggtcgt gtagaacaca gctttgccga tattggaatg gcaaatgtgc
     1501 agggtctcca cataactatg cgtacgggcg tattcttctc tgaagcggta gatgtagtga
     1561 attccattgt cgacggcgat accgatggcg atagcagcaa tcgtaatggt catcatgtcc
     1621 atagggattt ccgaccatcc catgacaccc aaaaccacca cggcacccaa caagttcggc
     1681 agaatgccta taatcgataa ggtgattgac cggaacaaca ccaggaacat gaacgcaata
     1741 cccagcatca cgacaccgat ggtcttgatc tgcgatgtga acaagctttg cagcatgttg
     1801 ttgtagagca cgagcagccc actcacagtc acgtctttga tcagcggctt gtaggtcgcg
     1861 agctgctcaa atccgtgaat cttccccaga tcacggcgca ctgtctccag caactctttg
     1921 cggcgcagat ctggtttcga atccaacaca cgcgccatga gccgtatctc gttatcatcg
     1981 atggagacaa atggttcgat gagagttttt ttaaccgagg cgggaagttt tgtatacagg
     2041 agtgacaact ccattccgtc cagctgtttt tcggcatagg attcggcaac ccgcaccgac
     2101 gaagcgaacg agagcacttt gccgatttcg ggcaatctgt cgaggtagtc gtgtgctttt
     2161 tttatgagct cgaccttggt gggagtaaac cataattcag gtttggtgcg aagcatttcc
     2221 aagtactcgc gttcctcctg tatctcttcc ggggtcatct ctttgaggtc ctcgggcgtc
     2281 aattcttcca tatcatcctc gagttttacc agtatttcca aaggcgtcgt gccgccgagc
     2341 ttttcatcga tgagcttgag gccttgataa atttcggtgt cgtcgctgaa gtagttgatg
     2401 aagctgttct cgacacgcag cagggtgatt cccgctatgc tcacgaccgt caacattact
     2461 gccaacacca gaatcttgtt gccttggaac tcggtcagac gggccagata cccaggtaaa
     2521 aaaaaccggt cactgtcgac ggtggctttt gattcgattt ttccaatcac caacagcaac
     2581 gtggggaaca gcagaaacga ggtcgcaaac gttactgcca aaccggcgct catcatccac
     2641 ccgaagtcga tgaccggctt gatatcgctc acgaccaggg aaccaaaacc tatgatggtc
     2701 gtcagcgcgg tatagagaca tggtctcacc atcttatggg tggtagttcg gactagcgtc
     2761 aactgatcgt catcaggatg atctcgatgg agctgcagat agcgcacaat caaatgaatg
     2821 ttcatcgaga ttgtgatgat cagcatgaga gccaaaaaat tggacgagat gacggtgacc
     2881 ttccaaccga tcaatccgag gacgccgatc attataaatc cggagtaaaa gctgctgaac
     2941 agagggagca cgatccaacg taatttccgg aagatagcgg tgagaatgat aatcaggaac
     3001 gcgagaacac cacccccgaa gacgatcagg tcgttgcgca cgaatgtcaa catgtcgtcg
     3061 gtaatcatcg gcaatccacc aagatgtaga acgccatgct ggcggtacgg ctcaataatg
     3121 tctctgatgt gggcaatgtc gaggtggcgt tgctcgtttc ttgcttcatt aacctgatcg
     3181 tattcggcgg tgatgcgttt caaggttcgc gtctcttcgg ccgagaggcc ggtatgccgt
     3241 tttttcgccc gcaactcgtc tcgagacttg agcaagtggt tgtactgttc atcctcgacc
     3301 agtcccaaca gtagaccagc ggttcgacca tctgcgctga cgatgagatc gcggtaaatg
     3361 gggctattga tcagctcgtc cttggcctcg gcccggtcaa taccgggttt ttccagactc
     3421 ggcatatcgt tgatcatttc ctcaatattt gcatccgagc tattgaatag t
//
LOCUS       DASCNL010000225         1772 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000515452, whole genome shotgun sequence.
ACCESSION   DASCNL010000225 DASCNL010000000
VERSION     DASCNL010000225.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1772)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1772)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000515452"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            57..473
                     /locus_tag="QF359_02935"
     CDS             57..473
                     /locus_tag="QF359_02935"
                     /inference="COORDINATES: protein motif:HMM:NF016701.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HJO85894.1"
                     /translation="MAKITGGCLCGGIRYEIEGDPFRIANCHCDDCRKATGSAYATNL
                     FYQEDQITLLQGSPKRFDHIADSGNSMFKEFCDNCGAQVFGGGSMRPGVKSVKVGSID
                     YANFVKPQVNLYLSHALDCTLIDEELDCFNAMPPPA"
     gene            complement(474..1313)
                     /locus_tag="QF359_02940"
     CDS             complement(474..1313)
                     /locus_tag="QF359_02940"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO85895.1"
                     /translation="MGRLDGKVAVITGATSGIGLRTAEMFVEEGASVVLAARREDEGA
                     AIQQRLGDNTLFVKTDVIQEEEIANLVKASVDRFGAIDAFFCNAGTGGVLQKIADIEV
                     EEFNDAVDILLKNVFFCYKHVSIQMRKNGGGSIVANASVAATLGGFSSHFYSAMKAGV
                     ISLTRSVAIEVAEASIRVNTVSPGGIATGIFGKSRGMSDQEADKVAARVEKVFAGRQP
                     ISRAGTPDDIANAVLFLCSDEASFITAQDLIIDGGATSGRWGETLAKANADIRRAISG
                     EEI"
     gene            complement(1379..1567)
                     /locus_tag="QF359_02945"
     CDS             complement(1379..1567)
                     /locus_tag="QF359_02945"
                     /inference="COORDINATES: protein motif:HMM:NF016028.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HJO85896.1"
                     /translation="MSELEAHVVHQEGIIQDLSNDIAKQWESIDAFTRTVEQLKDQLL
                     NLADGVQVILPGKPPPQY"
BASE COUNT          445 a          483 c          411 g          433 t
ORIGIN      
        1 tatagtagcc gctggattgc aagcatgatc gaaacctatg gttgaaggag ttccaaatgg
       61 cgaaaattac cggtggatgt ctgtgtggcg gaattcgcta cgaaattgaa ggtgacccgt
      121 tccgcattgc caattgccat tgcgatgatt gccgcaaagc aaccggctcg gcctacgcaa
      181 ccaatttatt ttatcaggaa gatcagatca ccttgctgca aggcagccct aaacgcttcg
      241 atcatatcgc tgatagcggt aattcaatgt ttaaggagtt ctgcgataat tgcggcgctc
      301 aggtcttcgg cggcggctca atgcgtcccg gtgttaaaag cgttaaagtc ggcagcattg
      361 attatgccaa ctttgttaag ccgcaagtta acctctatct ctcacatgcc ctagattgta
      421 cgctaatcga cgaagaactc gactgtttca acgccatgcc gccaccggcg taattaaatc
      481 tcttctcccg aaatagcacg gcggatatcg gcattggctt tcgccagggt ttcaccccac
      541 cgccccgacg tcgcaccgcc atcaataatg agatcctggg cagtgataaa gctcgcttca
      601 tcgctgcaca aaaacagcac cgcattggcg atatcgtccg gcgtgccggc acgtgagatt
      661 ggttgccggc cggcgaagac tttttcgacc cgcgctgcaa ctttatcggc ctcttgatcg
      721 ctcatacccc ggcttttgcc gaagatgccg gtggcaatac cgcccggcga taccgtgttc
      781 acccggatac tggcttcggc aacttcgatg gcgacactgc gagtcagact gattacgccg
      841 gctttcatgg cgctatagaa gtgcgatgaa aaaccaccca aggtagcggc cacactggca
      901 ttagcgacga tactgccacc accattttta cgcatctgga tactcacatg tttgtagcag
      961 aagaagacat ttttgagcag aatgtcgacg gcgtcgttaa actcttctac ttcaatatca
     1021 gcaatttttt gcagtactcc accggtaccg gcattgcaga aaaaagcatc aatagcgcca
     1081 aagcggtcaa ctgaggcctt aacaagattg gcgatttctt cttcctggat gacatcggtt
     1141 ttgacaaaca gagtgttatc gccgagccgt tgctgaatag cggcgccctc gtcttcacgc
     1201 cgggcagcca gcacgacaga agcaccttcc tcaacaaaca tttctgctgt ccgcaaaccg
     1261 atcccgctgg tcgctcccgt aataacagct acttttccgt caagccgccc catactactt
     1321 ccccaatccc tattagaaat caattcaatc cggaatgtgc ccgagacggg cagatcggtc
     1381 aatattgagg tggcggttta cctggtagaa taacttgaac cccatccgct aaattaagca
     1441 actggtcttt taactgctcc accgtacggg tgaacgcatc aatactctcc cattgcttag
     1501 caatgtcgtt gctcaaatcc tgaatgatac cttcctgatg caccacatgg gcttccagct
     1561 cactcacccg cgacgctgag ttctaacggc tgatgaaaga atttctccaa aatgtattaa
     1621 tggttgctga aattgactgc gggagcgacg aaagtggcct cacgagcatc ttccgcgtcc
     1681 cgattgaagt caactaagtc actctggcgg tgactttaaa agacccaata ttgagggcct
     1741 taaaataata gcttagtcgt tagcgactaa gt
//
LOCUS       DASCNL010000226         1193 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000520600, whole genome shotgun sequence.
ACCESSION   DASCNL010000226 DASCNL010000000
VERSION     DASCNL010000226.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000520600"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="QF359_02950"
     CDS             <1..204
                     /locus_tag="QF359_02950"
                     /inference="COORDINATES: protein motif:HMM:NF021517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HJO85897.1"
                     /translation="SLGIIFWAIGAGPVLPFMGVEVLLLYMAYRFGVRHGRKTETLSL
                     SKNELIVRKAGFGKKPRSHLDLE"
     gene            complement(338..1138)
                     /gene="dapB"
                     /locus_tag="QF359_02955"
     CDS             complement(338..1138)
                     /gene="dapB"
                     /locus_tag="QF359_02955"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HJO85898.1"
                     /translation="MKIGVVGCAGRMGQMLVKEVLATGGCELSGGTEGSGNSALGKDM
                     AAHAGLEPCGLEITEDADALFAGSDVIIDFTLPAATQNHLELAKQHQTALVIGTTGHD
                     ADGLAAIEASAQDITIVKAMNFSIGVNVLFALSEQLAATLDDDYDIEIVEMHHKHKVD
                     APSGTAIGLGEAAAKGRRVNLDDVAARGRDGITGERRKGDIGFTSLRGGEVVGEHSVI
                     FAGGSERVELVHKAASRGIFSNGAVHAARWTEGQAAGLYDMLDVLGFK"
BASE COUNT          275 a          342 c          299 g          277 t
ORIGIN      
        1 agcctcggta ttattttttg ggcaatcggc gccggacctg tcctgccgtt tatgggggtg
       61 gaggtgctgc tgctttatat ggcttaccgg tttggtgtcc gccatggccg caaaacagaa
      121 accctttcgc tgagcaaaaa cgaactgatc gttagaaaag cgggcttcgg caaaaaaccc
      181 cggagccatc tcgatctgga gtaaaatccc ggccagtata tgcggctgtt gctacagtcc
      241 aaaggagact tcgttgaagt aggatcgcta ttggtgccgg aggaacgcca tcttttggct
      301 gaaacgctca ggtcagaact gcagaaatta aagggtgcta cttaaacccc agcacatcga
      361 gcatgtcata aagaccggcg gcctggcctt cggtccagcg cgcggcatga accgctccgt
      421 tggaaaaaat accgcgtgag gcggctttat gaaccagctc aacccgctca cttccaccgg
      481 caaaaataac tgaatgctcg ccaactactt cgccgcctct gagcgatgta aagccgatat
      541 cgcctttcct gcgctcaccg gtaataccat ccctcccccg cgcggcaaca tcatcgaggt
      601 taaccctcct gcctttggca gcggcttcac cgagaccaat ggccgtaccc gaaggggcgt
      661 cgactttatg tttgtgatgc atctcgacga tttcaatatc gtagtcgtca tcaagcgtag
      721 cggcgagttg ttcggaaagc gcaaacaata cattaacgcc aatggaaaaa ttcatggctt
      781 tgacaatggt gatatcttga gccgaagctt caatcgccgc cagtccatct gcatcatggc
      841 ccgtggtgcc tatcaccaaa gctgtctggt gttgttttgc gagctcgaga tgattttggg
      901 ttgccgccgg caaggtaaag tcaatgatta catccgagcc ggcaaataga gcatcagcat
      961 cttcggtgat ctccaggccg cacggctcaa gtccggcatg ggctgccata tctttgccca
     1021 gcgcagaatt gccagaacct tcggtgccac cagacagctc acagcctccc gttgcaagta
     1081 cttccttgac cagcatctgg cccatccgtc cggcgcagcc gacaactccg attttcattg
     1141 tggtcccctt gtttagcccc aagcttggcc ccttactcag gccaatatat ctg
//
LOCUS       DASCNL010000227         5415 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000521937, whole genome shotgun sequence.
ACCESSION   DASCNL010000227 DASCNL010000000
VERSION     DASCNL010000227.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5415)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5415)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5415
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000521937"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="QF359_02960"
     CDS             <1..372
                     /locus_tag="QF359_02960"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HJO85899.1"
                     /translation="SSNQTPVKTLAARLKPDSAAAVLKDQKVYAFAGIGRPKKFFNTL
                     LEIGCDLVGAKAFDDHHPYTESEVTNLMAIAKHEEAKLVTTAKDHVRLPAALKKDVTI
                     VSVTLDWADESALDSLLKQFL"
     gene            392..1300
                     /locus_tag="QF359_02965"
     CDS             392..1300
                     /locus_tag="QF359_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl acyltransferase"
                     /protein_id="HJO85900.1"
                     /translation="MRNWFRRTIAHPTEAALAWALNACFALLPVDWASALGGWMGRMI
                     GPKLRVSNNARRSLTRVFPNLSTDEIEDIVLRMWDNLGRTAGEHPHLAKFDPYLENSR
                     VEFVGSEYLDQLLDDDEPGLIFSGHIANWELPPLAGTKRGLKLHIVYRRANNPFFDRL
                     VQKGRETLGSELLPKGAEGSKDILRALRKGDHLAMLVDQKMNDGISVPFLGADAMTAP
                     ALAQLAFRYKCPVVPLQVERLGGAYFRLTLHPPLDLPDSGDKQKDVETLMTTVNDHLG
                     DWIKQRPEQWLWVHNRWPNEQEQLPK"
     gene            complement(1318..2124)
                     /locus_tag="QF359_02970"
     CDS             complement(1318..2124)
                     /locus_tag="QF359_02970"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HJO85901.1"
                     /translation="MTKWYLSITMILLFFSPIAVAGELKLSGKFTQGGLIFGWATPGA
                     LITLDGKRIRQAKAGDFLLGFARLAARTSQLEVVFTDGSIVLRKLVIKQRKYDIQRID
                     GLPKRQVTPSAEDLARIKKESALINKARQTKVTEPFFTAEFTSPAIGRVSGVYGTQRI
                     LNGQERRPHYGQDIAAPTGAEVKATSAGVVIFVHPGMFFNGKTVIINHGLGLHSIYLH
                     MNAVRVKAGERVTKGKIIGEVGQTGRATGPHLHWGVTLNQLPLDPALIVN"
     gene            complement(2121..3575)
                     /gene="xseA"
                     /locus_tag="QF359_02975"
     CDS             complement(2121..3575)
                     /gene="xseA"
                     /locus_tag="QF359_02975"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HJO85902.1"
                     /translation="MTDNLDQIEPESLVGDNQPILSVSEISQSLKRTVEDNFSHVRVR
                     GEISRLTLARSGHMYLTLKDENAVLDGVCWRGTVSRLAVSPEDGMEVIVTGRLSTYAG
                     RSSYQIVIEQMEVAGEGALLKMLEDRRKKLLAEGLFDEERKKPLPFLPDCIGIVTSPT
                     GAVIRDILHRLADRFPRHVLLWPCNVQGDGADQQIAVGIEAFNRIAENGPIPKPDLLI
                     VARGGGSFEDLWSFNEEIVVRAVAASDIPLISAVGHETDTTLIDYASDQRAPTPTAAA
                     EMAVPVRSDLMAQVAYDGVRLQRVMNRSLEEHLREIEGLARGLPDPRRLAEEATQRLD
                     ERSERLINAKAIYFDGLASEIARLAGGLVSPAQQIRAKQNELGANIRAWQRALTTFVN
                     QKSHDLDRAGLKLEGLSFQRVLDRGFTLVTDDQGQPVLSADATEPGMVIGIRFKDGDI
                     GAVVSEGGAAKPRKKKATKKSSRKPNDDVQGSLL"
     gene            3651..4940
                     /gene="purD"
                     /locus_tag="QF359_02980"
     CDS             3651..4940
                     /gene="purD"
                     /locus_tag="QF359_02980"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HJO85903.1"
                     /translation="MNILVVGSGGREHALCWAIAKSPKCNRLYCAPGNAGIADVAECV
                     AVSGEDVNGLVTFAKNQAIELVIVGPEAPLVLGLVDALAAAGIKAFGPSAAAAELEGS
                     KAFMKDLFAKYNIPTAAYGRFTNFDDAVAYVRQQGAPIVIKASGLAAGKGVILAQTEA
                     EALEALDQMMIQKSFGDAGDEVVIEEFLDGEEASFFALVDGETALPLISAQDHKAAYD
                     GDKGPNTGGMGAYSPAPVMTPELAQEIMDTIIQPTIDGMAAEGCPYKGVLFAGLMIKD
                     GKPKTLEFNVRFGDPECQVLMVRLSSDLVEALDAAATGRLNEIKLIWREETALVVVMA
                     AEGYPGAYEKGSEIKNLDQANVIDGVTVFHAGTQAENGKILTSGGRVLGVTALGADVA
                     EAQNKAYQAVDSIDWEQGFCRRDIGWRAIARNNWSLD"
     gene            complement(4941..>5415)
                     /locus_tag="QF359_02985"
     CDS             complement(4941..>5415)
                     /locus_tag="QF359_02985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85904.1"
                     /translation="INGNLSTKTVGKMKLPPCHYQIQFEGRVKVEGDMQVTSDYQLPV
                     QCDYKKKPIKFTATMFITELPYLDNRKPVYQINVDVHNIPMEDEDVFSSTILYHFLKK
                     EITFDGVNKENMRNASKIANMKAANVIEALKGAVVMAHRSWGPKIWIALEKAEDQ"
BASE COUNT         1298 a         1370 c         1398 g         1349 t
ORIGIN      
        1 agctccaacc aaacgccggt aaagacctta gccgcgcgcc ttaaaccaga tagtgcagca
       61 gcagtgctca aagaccagaa agtctacgcc tttgccggca tcggccggcc gaagaaattt
      121 tttaatactt tgctcgaaat cggttgtgat ctggttggtg caaaagcctt tgatgatcat
      181 catccctata ctgaatccga ggtcaccaac ttgatggcca tcgccaaaca tgaagaggca
      241 aagctggtaa cgaccgccaa agatcatgtc cggctgccgg cagctttaaa aaaagatgtg
      301 acaatagtgt cagtaacgct cgactgggcc gatgagagtg cgctagacag tctgcttaag
      361 cagttccttt agaaattgag tacctaattt tatgagaaat tggtttcgca gaaccattgc
      421 gcaccctacc gaggcggcgc tagcctgggc actaaatgcc tgctttgcat tgttgccggt
      481 cgactgggcg tcagcgctcg gcggctggat gggacgcatg attggcccaa aattacgagt
      541 tagcaataat gctcggcgca gcctcacccg agtgttcccc aatttatcaa cggacgagat
      601 tgaagatata gtcctacgta tgtgggataa tttgggccgt accgccggtg aacatccgca
      661 tcttgctaaa tttgatccct atctcgaaaa tagccgggtt gaatttgttg gctcggaata
      721 tctcgatcag ctccttgatg atgatgaacc gggtctcatt ttttccggtc atattgctaa
      781 ttgggaatta cctcctctcg ccggcaccaa acgcgggctc aaacttcata tcgtctaccg
      841 ccgtgccaat aatccgtttt ttgaccggct ggtgcaaaaa ggccgcgaaa cattaggcag
      901 cgaattactt cccaaaggtg cagaaggttc taaagatatt ttacgcgctc tcagaaaagg
      961 tgatcatttg gcaatgctgg tcgatcaaaa aatgaatgac ggtatttcgg tgcccttctt
     1021 gggtgccgat gcgatgaccg ctccggccct ggctcaactg gcctttcgct acaaatgtcc
     1081 cgtggtgccc ctccaagttg aacggcttgg tggcgcttat ttccggctga ctctacaccc
     1141 tcccctcgac ctgccggata gcggcgacaa acaaaaagat gttgagaccc tgatgacgac
     1201 cgtcaacgac catcttgggg actggatcaa acagcggcca gaacaatggc tgtgggtgca
     1261 taaccgctgg ccaaatgagc aggaacagct accgaaatag ttaattaggt gcggcactta
     1321 attaactatt agcgctggat cgagtggtaa ttggttgagc gttactcccc aatgcagatg
     1381 cgggccggtg gcacggccag tttggccaac ttcaccaata attttcccct tggttacacg
     1441 ctcccccgct ttgacccgga cagcattcat atgaagatag atcgaatgaa ggcccagacc
     1501 gtgattgatg atcactgtct taccattaaa aaacataccg gggtgaacga agataacaac
     1561 gcccgccgaa gtggctttaa cctcggctcc cgttggtgcc gcgatatcct gaccgtaatg
     1621 gggccgccgc tcttggccat ttagaatacg ttgcgtgccg tagacaccac tgacgcggcc
     1681 aatcgccgga cttgtaaatt cggctgtaaa aaaaggttcg gtcactttgg tttggcgtgc
     1741 cttattgatg agcgcacttt ccttttttat gcgagccaga tcctcagcac ttggtgtcac
     1801 ttggcgtttg ggcaagccat cgatacgctg aatatcatat ttgcgttgtt tgataacaag
     1861 cttgcgcaat actatggaac catcggtaaa caccacttcc agctgagatg tacgggcagc
     1921 gaggcgcgcg aagcccagca gaaaatcccc ggctttagcc tgtcgtatcc gtttgccgtc
     1981 tagcgtgatc aaggccccgg gtgtggccca gccgaaaatc agcccgcctt gggtaaattt
     2041 cccggaaagt tttagctcac cggcaacagc aatcggactg aagaatagta aaatcatagt
     2101 gattgatagg taccatttag tcaaagcagt gatccttgga cgtcgtcatt tggttttcgc
     2161 gaagactttt ttgtggcctt cttctttcgc ggcttggcag cgccaccttc agaaaccacc
     2221 gcgccgatat cgccatcttt aaatcgaatg cctatgacca tgccgggctc ggtcgcgtcg
     2281 gcggacagca cgggctggcc ctgatcatcg gtcaccaacg taaatccccg atccagcaca
     2341 cgctggaaag agagtccttc gagcttcagg ccggctcggt caagatcgtg agacttttga
     2401 ttaacaaaag ttgtcagtgc gcgctgccaa gcccgaatat ttgcacctaa ctcattttgc
     2461 ttggcgcgaa tttgttgagc cgggctgacc agacctcccg ccaaccgtgc gatttccgag
     2521 gcgagtccgt caaaataaat ggctttggca ttgattagcc gctcactgcg ctcatccagc
     2581 cgttgggtag cttcctcagc caaacgtctt ggatcaggca ggccgcgcgc caacccctcg
     2641 atctcgcgga ggtgttcttc cagggaccgg ttcatgacac gttgcagacg tacgccatca
     2701 taggccacct gcgccatcag atcactacgg accggcacgg ccatttcagc tgctgccgtt
     2761 ggggttggcg cacgctgatc ggaagcataa tcgatcagtg tcgtgtcagt ttcatgacca
     2821 accgctgaga tcagcggaat gtcactagca gcaacagcgc ggacgacaat ttcttcattg
     2881 aacgaccaca ggtcctcaaa actaccgcca ccccgggcaa caattagcaa atcaggttta
     2941 ggtataggac cattttcagc tattcggtta aacgcttcga tgccgacggc tatttgctgg
     3001 tcggctccgt caccttgcac attacatggc cagagcaaaa catgacgtgg aaagcggtcg
     3061 gccaaacgat gaagaatatc ccgaataacc gctccggtgg gcgacgttac gataccaatg
     3121 cagtccggta aaaacggcag tggctttttg cgttcctcat caaacagacc ttccgccagg
     3181 agttttttgc gacggtcttc gagcatcttc aacaaggcac cttcaccagc aacttccatc
     3241 tgctcgataa cgatctggta acttgagcgc ccagcatagg tcgaaagccg tccggtaacg
     3301 atcacttcca taccatcttc cggcgagacc gcgagacggc tcaccgtgcc ccgccagcag
     3361 accccatcca gtactgcgtt ttcatccttc aatgtgagat acatatgtcc ggagcgggcg
     3421 agcgtcagcc ttgaaatttc tccccgcacg cgtacatgcg aaaaattatc ctcaacggtt
     3481 cgcttgagac tctgcgatat ttcgctgaca gaaagaattg gctggttgtc gcccaccaaa
     3541 ctttctggct ctatttgatc tagattatca gtcatgactt cctgttaatt tatgctacaa
     3601 gacaagcaga gtacagtgtg attgagcatc aacttttcgg gggagtttaa atgaacattc
     3661 tagtcgttgg tagcggtgga cgtgaacatg cactctgttg ggcgatcgct aaatctccta
     3721 aatgcaacag gctttattgc gctcccggca atgcggggat tgcggacgtt gctgaatgcg
     3781 ttgcggtgtc gggtgaggat gttaacggct tggttacctt cgctaaaaac caagccattg
     3841 agttggttat tgtcggccca gaagccccct tggtgctcgg cctcgttgat gccttagcag
     3901 ccgcaggcat caaagctttt ggcccaagcg ccgcggcagc tgagctcgaa ggatcgaagg
     3961 cgttcatgaa agatctgttt gccaaatata acattccgac cgcagcgtac ggccgcttta
     4021 caaattttga tgatgctgtc gcctacgtta ggcaacaagg cgcgccgatc gtcatcaagg
     4081 ccagcggttt ggccgccggt aagggagtca tcctcgctca aactgaagcg gaagcccttg
     4141 aggcattgga tcagatgatg atccaaaaaa gctttggtga tgccggagat gaagttgtaa
     4201 tcgaagagtt tctggacggt gaagaggcga gtttttttgc gctcgttgat ggtgagacgg
     4261 cactgccgtt aatctctgcc caggatcaca aagccgccta tgacggcgat aagggtccca
     4321 acacgggcgg tatgggcgct tattcaccag cacccgtgat gacgcctgag ctggcgcagg
     4381 aaatcatgga tactattatt caaccaacca tcgacggtat ggccgctgaa ggttgtcctt
     4441 ataaaggcgt gctgtttgcc ggcctcatga tcaaagacgg taagcccaaa acccttgagt
     4501 tcaatgtgcg gttcggtgat ccggaatgtc aggtgttgat ggtgcggcta agctcggatt
     4561 tggttgaagc gttggatgcg gctgcaacag gccggcttaa tgagattaag ttaatctggc
     4621 gggaagaaac ggctttggtc gtcgtcatgg cggcagaagg ctaccccggt gcttatgaga
     4681 aaggttcaga aattaaaaac ctggatcaag ccaatgttat cgatggtgtt acggtttttc
     4741 atgccggcac ccaagctgaa aacggcaaaa tattgacaag tggtgggcgg gtgcttggcg
     4801 taacagcgtt aggtgctgat gttgccgagg cgcaaaataa agcctatcag gcggtcgata
     4861 gtatcgattg ggagcaaggc ttttgccgcc gcgatattgg ctggcgggca attgccagaa
     4921 acaattggag cttagactaa ctactggtct tcggctttct ccagcgcgat ccagattttt
     4981 ggtccccaac ttcgatgcgc catcaccact gctcctttga gagcttcgat aacatttgct
     5041 gctttcatgt tggcaatttt gctggcgttt ctcatgtttt ctttattgac accatcgaag
     5101 gtgatttctt ttttgagaaa gtggtaaaga atggttgaag aaaatacatc ttcgtcttcc
     5161 atcggaatat tgtggacgtc gacattgatt tgataaaccg gtttacggtt atcgagataa
     5221 ggcaattcgg taataaacat ggtagcggta aattttatcg gttttttttt gtagtcgcat
     5281 tgcaccggta actgatagtc ggatgtgacc tgcatatcgc cttcgacttt tacccggccc
     5341 tcaaactgaa tctggtaatg gcaaggtggt aatttcattt tgccaacagt cttggtgctc
     5401 agattgccat tgatc
//
LOCUS       DASCNL010000228         1432 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000522339, whole genome shotgun sequence.
ACCESSION   DASCNL010000228 DASCNL010000000
VERSION     DASCNL010000228.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1432)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1432)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000522339"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="QF359_02990"
     CDS             <1..489
                     /locus_tag="QF359_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HJO85905.1"
                     /translation="LLEDKKVKSQKSTLTAKKVVRSVPPLDLKPFVLSRGSLRYPAVG
                     RISGHYDKTTRRGIKRKGLSIETRDSAQIIAPFDGKVVFAGNFRGYGQLLIIDHGEGY
                     HSLLAGMSRIDGVMGQYLLSGEPIGVMGSQNEGKPSLYIELRRNGQPINPVPWLAKRK
                     SS"
     gene            508..>1432
                     /locus_tag="QF359_02995"
     CDS             508..>1432
                     /locus_tag="QF359_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HJO85906.1"
                     /translation="MKKLAYLVTGVALSLAVIGGTFDLHAAEKEKKKENVDTYRLLNL
                     FGDVFERVRSSYVTETSDQDLIEAAITGMLTSLDPHSSYLNAKNFKDMRVQTRGKFGG
                     LGIEVTMENGLIKVVSPIDDTPAHRAGLQPGDFITHLDGEQVLGLTLSQAVEKMRGKV
                     GENIKLTIRRVNKPPFDVTVTRGIIPIRTVRSRIEGEDIGYVRISSFSQPTGIGLKKA
                     MEKIKKELGKNFKGLVLDLRNNPGGLLDQAVTVSDAFLDQGEIVSTRSRNKEEHQRFN
                     ARPGDLTDGKPIVVLINRGSASASEIVAGALQ"
BASE COUNT          387 a          328 c          381 g          336 t
ORIGIN      
        1 ctgcttgagg ataaaaaggt aaaatctcaa aaatccacct tgacggctaa aaaagttgtc
       61 cgatcggtac cgccgctgga tctaaaacct tttgtattgt cgcgcgggtc gctaagatat
      121 ccggccgttg ggcgcatcag cggacactac gacaaaacca ctcgccgcgg cataaagcgc
      181 aaagggctgt cgatcgaaac ccgcgattca gcacaaataa tcgctccctt tgatggtaaa
      241 gtcgtttttg ctggaaattt ccgtggatac gggcaactct tgatcattga tcatggtgag
      301 ggatatcata gcctccttgc tggaatgtcc cgcattgatg gggtcatggg gcagtatttg
      361 ttgtcaggcg aacccatcgg cgttatggga tcgcaaaatg aaggtaaacc gtcgctctat
      421 attgagctgc ggaggaacgg ccagccgatt aaccctgtgc cgtggctggc taaaagaaaa
      481 agcagttaaa aagacaaggt taagcaaatg aaaaaattag cgtatttggt gacaggtgtt
      541 gctctctccc tcgcagtgat cggcggcact tttgatctcc acgcggcgga gaaagaaaag
      601 aagaaagaga acgtcgatac ttatcgtttg ctgaatttgt ttggcgatgt atttgaacgg
      661 gtgcgctcca gctacgtgac ggagacatca gatcaagacc tcattgaagc tgccatcaca
      721 ggtatgctga cgtcactaga tccacattca agctatctca acgctaaaaa ctttaaagat
      781 atgcgggtgc agacccgggg taagtttggc ggtcttggaa ttgaagtgac catggagaac
      841 ggtttgatca aagtggtctc gccgattgac gatacgccgg cccatcgcgc tggcctacaa
      901 ccgggtgatt tcattaccca tctcgacggt gaacaggtgc ttgggctgac gctttctcaa
      961 gcggtcgaaa aaatgcgcgg caaagttggt gaaaacatta aactcaccat ccggcgggtg
     1021 aataaaccac cgtttgatgt caccgttacc cgcggcatca tcccgatccg taccgtgcga
     1081 tcgcgcatcg aaggcgaaga tattggctat gtccgcattt cgtcatttag ccagccaacc
     1141 ggcattgggc tgaaaaaggc gatggaaaaa atcaagaaag aactagggaa aaactttaaa
     1201 ggtctggtgc ttgatctcag aaacaatcct ggtggcttgt tagatcaagc agttaccgtt
     1261 tccgatgctt ttctggatca gggtgagatc gtctcaacgc ggtcccgcaa taaagaagaa
     1321 catcagcgct tcaatgcgag gccgggtgat ctgacagatg gtaaaccgat cgttgtgctt
     1381 attaatagag gatctgccag cgcctcagaa attgtcgccg gggcgttgca ag
//
LOCUS       DASCNL010000229         1898 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000524138, whole genome shotgun sequence.
ACCESSION   DASCNL010000229 DASCNL010000000
VERSION     DASCNL010000229.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000524138"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="QF359_03000"
     CDS             complement(<1..598)
                     /locus_tag="QF359_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HJO85907.1"
                     /translation="MLQQTTAATVKPYFVNFLVRWSDVKDLAAAPLDDVLHAWQGLGY
                     YARARNLHKCANIIAADYEGNFSKSESDLLTLPGIGPYTAAAIAAIAFGQKATPVDGN
                     IERVMARLNAISEPLPKSKPKLKKLAVRFTPDERAGDYAQALMDIGATICTPKSPNCN
                     ICPLIEPCRAVAVGQAENLPRREAKKPKPTRRGTAFWLV"
     gene            643..1311
                     /locus_tag="QF359_03005"
     CDS             643..1311
                     /locus_tag="QF359_03005"
                     /inference="COORDINATES: protein motif:HMM:NF017103.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HJO85908.1"
                     /translation="MQPAKVNAADDGHTSVKLAPKYLCSLLPPYIRNYLTGLSISVFL
                     LTISQQHRNAKRLKISNGKIMTIRRYQSRSISAIVGKLTRPIFGKRGFGQGTMIADWP
                     NITGSVLAQHTFPEKITYPRGERGNGTLYLRIDSPALALELQHLEPQLLERINTYFGY
                     RAVSFIKIIQGTLPEKPQEHEIKKRELTPTEKSALDERLNLISDPELKEVLRALGSEI
                     TTRD"
     gene            1579..>1898
                     /locus_tag="QF359_03010"
     CDS             1579..>1898
                     /locus_tag="QF359_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HJO85909.1"
                     /translation="MGIVSAQAYAQTAKLPPMSEILAERILGKADAPVTIIEYASMTC
                     PHCAAFHAGLYPAIKKEYIETGKVKFIYRDFPLDRLALAAAMMARCAPKERYFPVVDI
                     VYRT"
BASE COUNT          512 a          472 c          435 g          479 t
ORIGIN      
        1 tgaccagcca gaaagccgtt ccacggcggg tcggttttgg ttttttggct tcgcgccggg
       61 gcagattttc agcctggcct accgccactg cccggcatgg ctcaatcaag gggcaaatat
      121 tgcaatttgg acttttaggc gtgcaaattg tcgctccaat atccatcaaa gcctgagcat
      181 aatctccagc acgctcatcc ggggtaaatc gaacagccag tttttttaat ttgggtttcg
      241 atttcggcaa gggttccgat attgcattta gccgcgccat aacccgctct atattgccat
      301 caaccggcgt cgctttctgg ccaaaggcaa ttgctgcaat tgcggcggcg gtataggggc
      361 caattccggg caaggttaac aagtcacttt ccgatttcga aaagttacct tcataatcag
      421 ctgcaataat attggcgcat ttatgcaaat tgcgcgcccg cgcataataa ccaagtccct
      481 gccaagcatg cagaacatca tccaatggcg cggcagctaa atctttgaca tccgaccaac
      541 gcactaaaaa attcacgaaa tagggtttga cagtcgcggc ggtcgtttgt tgcaacataa
      601 tctcgcttag ccagacctga taaggatcag caggttctcc tggtgcagcc cgccaaggta
      661 aatgccgccg atgacggtca taccagtgta aaacttgcgc cgaaatatct gtgctctttg
      721 ctaccaccgt atatccgcaa ttacttaact gggttgtcga taagtgtttt cctgcttacc
      781 atatcgcaac aacatcgcaa tgcgaaacgt ctaaagatca gcaacggcaa aataatgacc
      841 atccgtcgat atcaatcgcg cagcattagc gccatcgtag ggaaactgac acgaccaata
      901 tttggtaagc gaggttttgg tcaaggcaca atgatcgccg actggccaaa tattacgggc
      961 tcggtattag cgcagcatac tttcccggaa aaaataacct atcctcgagg tgagagggga
     1021 aatggcacgc tttatctgcg cattgacagc ccggcactgg ctttggagtt gcaacacctt
     1081 gagccgcaat tgcttgaacg tatcaatact tattttggct atcgtgcggt ttcctttatc
     1141 aaaattattc agggcaccct gccggaaaaa ccgcaagaac atgagatcaa aaaacgggaa
     1201 ctaacgccga ccgagaaatc tgcgcttgat gaacgtctaa atctgatcag cgacccggaa
     1261 cttaaagaag tgctacgtgc gctcggcagt gaaatcacca cacgtgacta attgctgcct
     1321 ttatttccgc ccaataatta ccccattttc aaatcactgt gaatataagt acttgtgact
     1381 ggggtatcgg atcgattctt gcaaagttat ccccaattaa ttgtgtattt ggctgcgatc
     1441 atcgcttgtc gaaaacagct gagccattta tattcatcaa catctagtag ttaggaggca
     1501 attttgccca aacatgtggt agaaacaaaa aaatcgcgat ttcagggaat cgcccgaatt
     1561 ttggtcggat taacgtttat gggaatagta tcggcgcaag cctatgccca gacggcgaaa
     1621 ctaccgccga tgtcagaaat tttagctgag cgcatccttg gcaaagcaga tgcaccagta
     1681 acgatcattg agtatgcctc aatgacttgc ccgcactgcg ccgcctttca cgccggactc
     1741 tatccagcga ttaaaaagga atatatcgaa actggtaagg tgaaatttat ctatcgggat
     1801 tttcctctcg accgcttggc attagcggca gcgatgatgg ccagatgtgc gccaaaagaa
     1861 cgctactttc cggtggtcga cattgtttat cgcactca
//
LOCUS       DASCNL010000230         1869 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000524566, whole genome shotgun sequence.
ACCESSION   DASCNL010000230 DASCNL010000000
VERSION     DASCNL010000230.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000524566"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(7..1551)
                     /locus_tag="QF359_03015"
     CDS             complement(7..1551)
                     /locus_tag="QF359_03015"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO85910.1"
                     /translation="MGEIEFILTAAGAGLTQIFTWDIFPMMMVGILVGMFVGLVPGLG
                     GLVGFALLIPFSLSMEPLVGLAFLLAMSAVTTQTDTIPAVILGVPGTAAAMATSLDGY
                     PLAKKGQAGRALCASYYASIFGTLVATALFLLFLPILRAVIFAFGQPEFFMLVMLGLI
                     LAGSLAGNSLARGLIMAGFGLLLSTVTLETSTGEPRFAGDIIYLWEGVPLLPVILGIF
                     AIPEVIDLARRQSSISETSYDTRVSGLWWGLRDCLENWWLIVKAGTLGTIAGFIPGLG
                     GQVAEWMAYGTAVASDEDPKSFGKGNIRGVIAPEAGTAAQKPGALIPTITFGIPGNGG
                     MAILLGVFMILGLRPGPEMVTTKLDATMMMVWVIVVANIIAAILALFLQKWLILLCYL
                     RSSILVPLVLGTMLVGATMANQSFGDVVLFFLFGIFGYVFKHADWPRVPLIMGLIMGK
                     LAEQYLFLSTNLHGFKWLTDRPIVWVIGAVTIAVVVVPAIRRYRKAKLIADGLPANQS
                     ASGEDD"
     gene            complement(1598..>1869)
                     /locus_tag="QF359_03020"
     CDS             complement(1598..>1869)
                     /locus_tag="QF359_03020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85911.1"
                     /translation="VNRTFWLPPKTDQKIVDIWRHAVESAANDPELRSKYRKKFGAPF
                     KFGNWKQALKTIKSSIAALDTPYFQPGGKGFKLMYRGKKKGKKKK"
BASE COUNT          516 a          500 c          435 g          418 t
ORIGIN      
        1 tattcatcag tcatcctccc ctgatgccga ctgatttgcg ggcaggccgt cagctattaa
       61 tttggctttg cgatatctcc tgatcgccgg aactaccacg acggctatgg taactgctcc
      121 gataacccag acgattggcc ggtccgtaag ccatttaaaa ccgtgcaaat tagttgaaag
      181 gaataaatat tgctctgcaa gtttccccat aatcaaaccc ataatcaagg gaactcgtgg
      241 ccaatccgcg tgtttaaaca catagccgaa gatgccaaac aagaagaata aaacgacatc
      301 accaaaggac tgattggcca tcgtcgcacc gaccagcatc gttcccagca ccaaaggaac
      361 caatatggat gagcgcaaat aacataataa aattagccat ttttgcaaaa acaaggcgag
      421 aatagcggct attatattgg caacaacaat gacccaaacc atcatcattg ttgcatccag
      481 cttggttgtt accatttccg gtccgggtcg taatcccaag atcatgaaaa cgcccaacag
      541 gatcgccatg cccccgttgc ccggtatgcc gaaagtaatg gtcgggatga gcgcgccagg
      601 tttttgcgct gctgttcctg cttcgggggc gataacacca cgaatgttgc ctttgccaaa
      661 ggattttgga tcttcatctg aagccactgc tgtgccataa gccatccatt cggctacttg
      721 gccgccgagg cctggtataa atccggcaat cgtacccaag gttcctgctt taacgattag
      781 ccaccagttt tccaggcaat ctcttaaacc ccaccacaag ccggaaacac gagtgtcgta
      841 ggaagtctct gagatcgaag attgtcgtcg tgcgaggtcg atgacctccg gaatggcgaa
      901 tattcccaag ataaccggaa gcaaagggac gccttcccat aaatatatta tatcaccggc
      961 aaaacgcggt tcacccgtac tggtttccaa tgtcaccgtc gataacagca ggccaaaacc
     1021 ggccataatc aacccgcggg ccagggaatt gccagccaag gagccggcta gaattaatcc
     1081 cagcatgacc agcatgaaaa actccggttg tccaaaggca aaaattaccg ctcggagaat
     1141 gggcagaaac aatagaaaca gcgcagtcgc gaccaaggta ccaaatatac tggcatagta
     1201 ggatgcgcag agggcgcgcc cggcctggcc cttcttggcc agggggtagc catccaatga
     1261 agttgccatc gccgctgccg tccccgggac accgaggatg acagcaggga tggtgtcggt
     1321 ttgcgtcgtc acggcactca ttgccagcag aaaggcaagc ccaactagcg gttccattga
     1381 gagcgagaac gggatcaaca gagcgaaccc gaccagtcca ccgagaccgg gcactaagcc
     1441 gacgaacatg ccgaccagga tacccaccat catcatcggg aatatatccc aagtgaagat
     1501 ttgagttaat cctgcgccgg cagccgttag aataaattcg atctcaccca cggcaatttc
     1561 tggttaacta gacaaatcca aaatatttaa aagggtacta ctttttcttt ttaccctttt
     1621 ttttgcctct atacatcagc ttaaaccctt tgccacccgg ttggaaatac ggtgtgtcga
     1681 gagctgcgat gcttgatttg atcgttttca gcgcctgttt ccaattaccg aacttaaagg
     1741 gtgcaccgaa ttttttgcgg tatttcgaac gtaattccgg atcattcgct gcggattcaa
     1801 ccgcgtggcg ccaaatatcg acaatcttct ggtcagtttt tggcggcaac caaaaagtcc
     1861 ggttaacgg
//
LOCUS       DASCNL010000231         3716 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000525519, whole genome shotgun sequence.
ACCESSION   DASCNL010000231 DASCNL010000000
VERSION     DASCNL010000231.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3716)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3716)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3716
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000525519"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..290)
                     /locus_tag="QF359_03025"
     CDS             complement(<1..290)
                     /locus_tag="QF359_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HJO85912.1"
                     /translation="MAKDDFYTTLGVDRDASADEIKKAYRKMAMKYHPDRNAGDEAAE
                     KNFKKVNEANDVLSDDEKRAAYDRFGHAAFEQGGPGEAGGFGGAGFADIFED"
     gene            complement(364..2343)
                     /gene="dnaK"
                     /locus_tag="QF359_03030"
     CDS             complement(364..2343)
                     /gene="dnaK"
                     /locus_tag="QF359_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HJO85913.1"
                     /translation="MSKVIGIDLGTTNSCIALMEGSDAKVIENSEGTRTTPSMVAFSD
                     DGERLVGQSAKRQAVTNPENTLFAIKRLIGRRFDDPMTEKDKGLVPYHIVSGDNGDAW
                     VEAESEKYSPSQVSAFILQKMKETAESHLGEDITQAVITVPAYFNDSQRQATKDAGKI
                     AGLDVLRIINEPTAAALAYGLDKNENGTIVVYDLGGGTFDVSVLEIGDGVFEVKSTNG
                     DTFLGGEDFDQCVIDYLADEFKKEQGVDLREDRLALQRLKEGAEKAKVELSSTMQTEV
                     NLPFITADQSGPKHLNIKLTRAKLEALVEKLVERTIGPCKAALKDAGISAGEIDEVIL
                     VGGMTRMPKVQEIVQEFFGREPHKGVNPDEVVALGAAIQGGVLQGDVKDVLLLDVTPL
                     SLGIETLGGVFTRLIDRNTTIPTRKSQVFSTAEDNQSAVTIRVFQGEREMAADNKLLG
                     QFDLVGIPPAPRGMPQVEVTFDIDANGIVNVSAKDKATGKEQQIRIQASGGLSDDDIE
                     QMVQDAEAHADEDKERKEMVEARNQADTVVHSTEKNLSEYGDKISEEEKAEIEAAVTV
                     VKEALENEEANVEELKEKTDVLMQTAMKLGEAMYKASQEEGAEGMPEGMEGFDPNNMA
                     AGMGGDAGASDAKSDETVVDAEFEEVDPEKKDEAS"
     gene            complement(2572..3417)
                     /gene="grpE"
                     /locus_tag="QF359_03035"
     CDS             complement(2572..3417)
                     /gene="grpE"
                     /locus_tag="QF359_03035"
                     /inference="COORDINATES: protein motif:HMM:NF010739.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HJO85914.1"
                     /translation="MSINNQNSPDNVDEELPEEQSENLAEEAGSEMAEENLAKDLADL
                     EAQNDAVDPTDVADEAETEREDTQDDVPPTYEELESEIAALKDQLLRTLADSENLRRR
                     TEREKTDMSKYAITSFARQIVSVADNLTRALESVAEEARNGDEELNNLYVGIEMTEKE
                     LQNSFEQFHIKVVDSIGQKFDHNLHQAMFEVEDPNQPSGLVVQEMQKGYVLHDRLLRP
                     AMVGVSKGGPKLEDVDEAESSTQSPVEPPKEKAANDISSAYEKQAEAADQEAEGGSSK
                     IDTEL"
     gene            complement(3453..>3716)
                     /gene="hrcA"
                     /locus_tag="QF359_03040"
     CDS             complement(3453..>3716)
                     /gene="hrcA"
                     /locus_tag="QF359_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249251.1"
                     /note="Negative regulator of class I heat shock genes
                     (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock
                     induction of these operons; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HJO85915.1"
                     /translation="LFLALETDETMLKILELADTAEGVQIFIGADNELFNLSGCSFIV
                     APYHSCSSQLVGAIGVIGPTRMNYSRIIPMVDYTAKLIGKLMS"
BASE COUNT          836 a         1007 c          801 g         1072 t
ORIGIN      
        1 atatcttcaa aaatatcggc aaagccggca ccgccaaatc cgccagcctc accgggcccg
       61 ccttgttcaa aggccgcatg gccaaaacgg tcataggctg cccgtttttc atcatcggac
      121 aacacgtcat tggcttcatt gacttttttg aagtttttct cggccgcttc atcacccgca
      181 ttgcgatccg ggtgatactt catcgccatt ttacgatacg ctttttttat ctcatcggcc
      241 gaagcgtcac gatcaacacc gagcgtcgta taaaaatcat ctttcgccat taggatgacc
      301 ctatcttaat atgcagcggg cgctccttat aatagttctg gagaacgccc attacatttc
      361 cccttaagac gcttcgtctt tcttttcagg gtcgacctct tcaaattcgg cgtcgacgac
      421 agtttcatcc gatttggcgt ccgacgcacc agcatcacca cccataccgg cagccatatt
      481 gtttggatca aatccttcca taccttccgg catgccttca gcgccttctt cttggctggc
      541 tttatacatt gcctcaccaa gtttcatcgc cgtttgcatc aagacatcgg ttttttcttt
      601 aagttcttcg acattggctt cttcgttttc gagcgcttct ttgacaaccg tcaccgctgc
      661 ttcgatttct gctttttcct cttcgctaat cttatcgccg tattcgctca gatttttctc
      721 cgtcgagtga accacggtgt cagcctgatt acgggcttcg accatttctt tgcgttcttt
      781 atcttcatca gcatgggctt cggcatcttg aaccatttgc tcgatatcat catcagacaa
      841 accaccagat gcttggatgc gaatctgctg ttctttacca gtcgctttat cttttgccga
      901 gacattgacg ataccattgg catcaatgtc gaaagtcact tcgacttgcg gcatgccgcg
      961 tggtgccggt ggaataccaa cgagatcaaa ctgaccgagc agtttgttat cggcggccat
     1021 ttcgcgctca ccctggaaga cccgaatggt caccgcactc tgattgtctt ctgccgtgga
     1081 aaacacttgg cttttccggg ttggaatggt cgtattgcga tcgatcagac gggtaaacac
     1141 accgcccagg gtttcgatac ccagagacaa tggcgtcacg tccaacagca gcacatcttt
     1201 gacatcacct tgtagaacgc caccttggat cgccgcgccg agagctacga cttcatccgg
     1261 gttaacccct ttatgaggtt cgcgaccaaa gaattcctgg acgatttcct gaactttcgg
     1321 catccgggtc ataccaccga ccaggatcac ctcatcgatt tcaccggcgc taattccggc
     1381 atctttgagg gccgccttac atggtccaat cgtgcgttcg actaattttt cgaccagcgc
     1441 ttcaagtttc gcccgggtca atttaatgtt gaggtgtttc ggaccgcttt gatcggctgt
     1501 aataaacggc aaattaactt cggtctgcat cgtgctcgac aattcaactt tagctttctc
     1561 tgcaccttcc ttaagacgct gcagcgccaa gcggtcttca cgcagatcaa caccttgctc
     1621 tttcttaaat tcatcagcaa gataatcgat aacgcattgg tcaaagtctt cgccgccaag
     1681 gaacgtatca ccattggttg attttacttc aaacacgccg tcgccgattt cgaggacgga
     1741 aacatcgaac gtaccgccgc caagatcata gaccacgatc gtgccgtttt cgtttttatc
     1801 caagccgtaa gccagagcag cggccgtcgg ctcattgata atgcggagca catcaaggcc
     1861 ggcgatttta ccagcgtctt tggttgcttg gcgttgagaa tcattaaaat aagccggcac
     1921 cgtgataacc gcctgagtga tatcttcgcc gagatgactt tctgccgttt ctttcatctt
     1981 ctgcagaatg aaagcgctga cctggctcgg gctgtatttt tcgctttctg cttcgaccca
     2041 ggcatcacca ttgtcaccag agacaatatg atatggcacc aggcctttat ctttttccgt
     2101 catcggatcg tcaaaacggc ggccgatcaa acgcttgatt gcaaacagcg tattttccgg
     2161 attggtgacg gcttggcgtt ttgccgactg gccgacgaga cgttcaccat cgtcagaaaa
     2221 ggctaccatg gatggggttg tccgagtgcc ctcggagttt tcaatgactt tcgcatctga
     2281 cccttccata agggcgatac aagagttagt cgtacctaaa tcaattccga ttactttgct
     2341 cattctgtcc tctcaattta gcaacagaac ctcgcggccc taattcagct ggcggcaccg
     2401 ccaaggtcat agattaatgt taaaatttaa ctgcgtattt gctgaagtat ttcagtttag
     2461 ccataagcgg cttgtggcaa agcagcttat gggcgttata taggctgcca tatatacggc
     2521 tgcaaccact gaaaccaatt attttcgctt attttagcgc caaaactgcc gctacaactc
     2581 ggtatctatt ttggaactgc cgccttccgc ctcctgatcg gcggcttcgg cctgtttttc
     2641 gtaagccgat gagatgtcat tggcagcttt ttccttaggt ggctccaccg gagattgagt
     2701 ggaggattct gcttcgtcaa cgtcctccag ttttggtcca cccttagaga cgccaaccat
     2761 tgccgggcgt agcagtcggt catgcagcac gtagcctttt tgcatttcct ggacaaccag
     2821 gccggacggt tgattcgggt cctcaacttc aaacatcgct tgatggagat tgtggtcaaa
     2881 tttctgaccg atcgagtcaa caactttgat atgaaactgt tcaaaagagt tctgcagctc
     2941 tttttccgtc atttcgatgc cgacatagag attgttaagc tcttcatcgc cattgcgggc
     3001 ttcttctgca acgctttcga gggcgcgggt taaattgtcc gctaccgaga caatctggcg
     3061 ggcgaaacta gtaatcgcat atttagacat gtcggtcttt tcgcgctcgg tccgccgccg
     3121 cagattttcg ctatctgcca aagtcctgag taactggtct ttcaaggccg ctatttcgga
     3181 ttccagttcc tcataagttg gtgggacatc atcctgagtg tcttcccttt cggtctcggc
     3241 ttcatcagca acatcggttg gatcaacggc atcattttgg gcttccaaat cggctaaatc
     3301 tttagccaga ttttcttctg ccatctcgct gcctgcttct tccgccaaat tctcagattg
     3361 ttcttccggt aattcttcat ccacattatc gggcgaattt tggttgttta tgctcatctt
     3421 aatcctaaaa cctcattaca tttaattaag ccttagctca ttaatttacc aattaatttt
     3481 gccgtataat ccaccatggg gataatacga gaataattca tacgcgtcgg gccaatcacg
     3541 ccaattgcgc caacaagctg actggagcag gaatgatacg gcgcgacaat aaacgaacaa
     3601 cccgacaaat taaacaactc attatcagcg ccgataaata tttgtacgcc ttccgctgtg
     3661 tcggcgagtt cgagtatttt cagcatggtt tcatcggttt ccaaagccaa aaacaa
//
LOCUS       DASCNL010000232         3782 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000525989, whole genome shotgun sequence.
ACCESSION   DASCNL010000232 DASCNL010000000
VERSION     DASCNL010000232.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000525989"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(49..951)
                     /locus_tag="QF359_03045"
     CDS             complement(49..951)
                     /locus_tag="QF359_03045"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:NF013939.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HJO85916.1"
                     /translation="MKFDLVMTDKQLESLRDELDTIDIEIQNLLTRRAEISLEVRKVK
                     QDGEVKLKPGREAQIIRALIERHQGHFPKPELIRIWREILSASLQAQGAFSVGVYVPE
                     DGINDSDENSWGYFAAARGHYGTFTPMIGYPSQRRVIEAVIEDECSVGVLPVPGRQED
                     DPWWRHLAIQGPMLSSNGSLNPPRIISRLPFATPSNGANKMGSKSGGNALDSLVIAKS
                     EMDPSGLDCTYIGLDLSEDIPNTRIDVRIVEIGMTGSVIALWHDDDMPERWLSLLKIN
                     GYFTPEDGNLLRLAEDIKAVSFSS"
     gene            1141..2331
                     /locus_tag="QF359_03050"
     CDS             1141..2331
                     /locus_tag="QF359_03050"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HJO85917.1"
                     /translation="MNEQTGGQIDEGCAPLLSDQEVGKKVTLGVDDPLRLDCGVELTN
                     FSVAYQSYGELNAAKTNVILICHALSGDQFVSGVNPVTCKEGWWDLVIGPGKLIDTDR
                     FFVICPNILGGCMGTIGPKEINPATGKPWGLDFPVITVSDMVRAQALLLDHLGVEKIF
                     CALGGSMGGMQVLEWAVAYPERVFAAVPIATAPHHSAQNIAFHETGRQAIMADPDWHG
                     GDYLSYDSRPHRGLAIARMVAHITYLSEPALQNKFGRQLQDRDAISFGFDADFQVESY
                     LRHQGSTFVDRFDANSYLYITRAMDYFDLAERHGGGVLAEAFRGVDTRFCVISFTSDW
                     LYQTAESRAIVKALNAVAANVSFAEIKSDKGHDAFLLEEPEFWKVLSGFIEGAAERYG
                     LVSQ"
     gene            2328..2954
                     /gene="metW"
                     /locus_tag="QF359_03055"
     CDS             2328..2954
                     /gene="metW"
                     /locus_tag="QF359_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HJO85918.1"
                     /translation="MMTDAQKRAIRIDLQLIAEMVEPGSRLLDVGCGDGALLDYLHHD
                     KQVDGRGIELSAEGVNACVSAGLSVIQGDADQDLDDYPDQAFDYVVLGQTLQATHEPH
                     NVLANLVRIGKRAVLSFPNFGYWRVRTRLLFGGKMPRTNSLSYDWYDTPNIHFCTIRD
                     FVDLCDQMGITIERGIALDHNGGELRIGSSMRFANLIGEQAVFLLRKS"
     gene            complement(2972..3697)
                     /locus_tag="QF359_03060"
     CDS             complement(2972..3697)
                     /locus_tag="QF359_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HJO85919.1"
                     /translation="MWLDVVDLQEFYADPLGGVARRMIGRHLRETWPDVAGMNVLGIG
                     FPTPYLNAFRDEASRVIAAMPASQGVLHWPNEGPGQTILTDEAELPLPDLSIDRVVLI
                     HAVECSEAIRPMMREIWRVLSGSGRVIVIAPNRGGIWSRLERTPFGYGRPYSQSQLTR
                     LLRDTMFTPVTKRAALYVPPSRSRMVMSSAPVWENIGQRWLRIFSGAVGGVVSIEASK
                     QIYAATPTLEASRRHGYATVPNQ"
BASE COUNT          915 a          920 c          965 g          982 t
ORIGIN      
        1 attaatattg ggtgctttta tgcttatacc tttctttgta caaatctttt atgaagaaaa
       61 tgacactgct tttatatctt cagccaggcg caatagattg ccatcttcag gggtgaaata
      121 gccattaatt tttaacagcg agagccatcg ttccggcata tcgtcgtcat gccataatgc
      181 aatgacggaa ccggtcatac cgatttccac aattcttaca tcaattcttg tattgggtat
      241 gtcttccgac agatcaagcc caatataagt gcaatccaat cccgaaggat ccatctcact
      301 tttggctatc actaaagaat cgagcgcatt accacctgat ttgctcccca ttttatttgc
      361 accattacta ggcgtcgcaa agggcagacg ggaaataata cgtggtggat ttaaactgcc
      421 gttactactc agcatcggac cctgtattgc caagtgccgc caccacggat catcttcctg
      481 gcggcccggt actggtaaaa cgccgaccga acattcgtct tcgataacgg cttcaataac
      541 cctgcgctga gagggataac caatcattgg cgtaaaagtg ccataatgcc cacgggcagc
      601 ggcgaagtag ccccagctat tttcatcact atcgttaatg ccatcttccg gtacatatac
      661 gccgaccgaa aaggcaccct gcgcttgcaa cgaagcgctt aggatttccc gccatattcg
      721 aatgagttcg ggtttcggga aatggccttg atgacgttcg atcagggcgc gtataatctg
      781 cgcctcacgg cctggtttta actttacctc gccatcctgc ttaaccttcc tcacttcgag
      841 cgagatttcc gcccggcggg ttaaaagatt ttgaatctca atatcgattg tatcgagttc
      901 atcacgcagg gattctaact gtttgtcagt catcaccaaa tcaaacttca taattttcaa
      961 aattcattta ctctcaatcg agcaggcgac agtgatagtc tgccaaagcg gtaaaatcaa
     1021 agaaaagatt gacagattgg cgcttgattc atagctatgg ggctaatttt acccggtctt
     1081 tacctatttt tgcgaaaatt gagaaaaata gctgaaaatc gattacgtaa agccaaaaaa
     1141 atgaatgaac aaacaggcgg tcaaatagac gagggctgtg ctccgttgct gagcgaccaa
     1201 gaagtcggca agaaagttac gcttggagtc gatgatccgc tgcgtctgga ttgtggtgtc
     1261 gagctgacta atttttcggt tgcctatcag tcttatggtg aactgaacgc cgcgaaaaca
     1321 aatgtaatac tgatctgtca tgcgctcagt ggtgatcaat ttgtttccgg cgttaacccg
     1381 gtaacctgca aggagggctg gtgggatttg gtgattggac ccggcaaact catcgatact
     1441 gatcggtttt tcgtcatttg cccgaacatt cttggcggct gtatgggaac gataggcccc
     1501 aaagaaataa atccggcaac cggcaagcca tgggggctcg attttccggt tattacggta
     1561 tccgatatgg tgcgggccca ggcacttctt ttggatcatt tgggtgtcga aaaaatattt
     1621 tgtgcactcg gcggctcaat gggcggtatg caggtgttgg aatgggcggt agcttatccc
     1681 gaacgggtgt ttgcggctgt gccgattgcc accgcgcctc atcattcagc ccaaaacatc
     1741 gcctttcatg agacgggccg gcaagccatc atggctgatc cggattggca cggcggcgac
     1801 tatctcagct acgatagccg gcctcatcgc gggctggcga ttgcccggat ggttgcgcat
     1861 attacttacc tatcggaacc cgcgttacag aataaatttg gccgccagtt acaggaccgc
     1921 gatgcgatct cctttggctt tgatgccgat ttccaggttg aaagttatct acgtcatcaa
     1981 ggcagtacat ttgtcgaccg gtttgatgct aattcctatc tctatatcac gcgggcgatg
     2041 gattattttg atctcgccga gcgccacggc ggtggagtgc tggcggaagc ttttcgcggc
     2101 gtcgatacaa gattttgcgt catctcgttt accagtgatt ggctgtacca aacggcagag
     2161 agccgggcca ttgttaaagc gctgaatgcg gtagcggcca atgtcagttt cgccgaaatt
     2221 aaatctgata aaggtcatga tgcgtttctt cttgaagaac ccgagttctg gaaagtattg
     2281 tcgggtttta ttgaaggcgc ggcagagcgc tacgggttgg tcagccaatg atgaccgatg
     2341 cgcaaaagcg ggcaatccgc attgacctcc aattgattgc cgagatggtc gagcccggca
     2401 gccgtttgct cgacgttggc tgtggtgacg gtgccttatt ggattatctt catcatgata
     2461 aacaagtgga tggccgcggc atcgagctta gtgcggaagg tgtgaacgct tgtgtctcgg
     2521 ctggcctgtc ggtaattcaa ggtgatgctg accaggatct tgacgactac ccggatcaag
     2581 ctttcgatta tgtcgtgctc ggtcaaactc tgcaggcgac acatgaacct cacaatgttt
     2641 tggctaatct tgtccgtatt ggcaaacgcg cagtcttgtc attcccaaat ttcggctatt
     2701 ggcgggtgcg taccagactt ttgttcggag gtaaaatgcc gcgtaccaac tcactgtcct
     2761 atgattggta tgacacgccc aacattcatt tttgcacgat ccgggatttt gttgatctgt
     2821 gcgatcaaat gggcatcacc atcgaacgcg gtatcgcgct tgaccataac ggtggagaac
     2881 ttaggatcgg ctcgagcatg cgctttgcta atttaatcgg tgaacaagct gtttttctgc
     2941 tgcgtaaatc ataaatttat tgccaataaa attattgatt gggaacagtt gcatagccgt
     3001 gccggcgtga cgcttccagg gtcggggtcg cggcataaat ttgtttgctg gcttcgatcg
     3061 aaaccactcc accaacagca ccgctaaata ttctaagcca tcgttggccg atattttccc
     3121 acactggtgc ggaggacatc accatgcgcg accggctggg tggtacataa agtgcggccc
     3181 gtttagtgac cggcgtgaac atggtatcgc gcaatagccg ggtaagctgc gactggctat
     3241 aaggccggcc ataaccaaac ggtgtacgct ccagccggga ccagatgcca ccacggttgg
     3301 gggcaatgac gattactcgg ccgctgccgg aaaggacgcg ccaaatttcc cgcatcatcg
     3361 gccggatcgc ttcactgcac tcaaccgcat ggatcaagac cacgcgatcg atggaaagat
     3421 caggcaaagg cagttccgcc tcatccgtta aaatggtttg gccaggtcct tcattgggcc
     3481 aatgaagtac cccttgggag gcaggcatgg cggcgatcac gcggctggct tcgtcccgaa
     3541 aggcattgag atagggggtc ggaaagccga tgcccaaaac gttcatccca gcgacatcag
     3601 gccaggtttc acgaagatga cgcccaatca tgcgccgtgc cacaccgccc agcgggtcgg
     3661 cgtaaaattc ttggagatca acgacatcta accacatggg ggtaatatgt tctgatttaa
     3721 cagttttttc cagctatgat atcgtgagcc cgttgtttta ataattggtt ttttgaaaat
     3781 cg
//
LOCUS       DASCNL010000233         1433 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000528781, whole genome shotgun sequence.
ACCESSION   DASCNL010000233 DASCNL010000000
VERSION     DASCNL010000233.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000528781"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="QF359_03065"
     CDS             <1..962
                     /locus_tag="QF359_03065"
                     /inference="COORDINATES: protein motif:HMM:NF024761.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="topoisomerase C-terminal repeat-containing
                     protein"
                     /protein_id="HJO85920.1"
                     /translation="TAVDGTADLRVREVLDNLNEILGPHFFHGNGDGNPRQCPSCADG
                     ELSLKLGRHGAFIGCSKYPDCRYTRPLTNGDGKNGSDITDSGPKVLGTHPELGSEITL
                     RRGPYGFYVQLGEGEGKTKPKRSSLSKAMVSAEVDLEMALKLLELPREVGIYPETGQM
                     ITAGIGPFGPFIKLAGTYVSLKEDDVLTIGLNRACDLLANAPKRPEPREVGIHPRTKK
                     PVMMRWGRWGPFVQHGKIKANMPKDMKAPKGEEDNQKTPSLEEALTWLAAKGDKTKAK
                     KKAPAKKKKTATKKKATAKKNAPEIEAIQEAEPPVAPQEDTSS"
     gene            959..>1433
                     /locus_tag="QF359_03070"
     CDS             959..>1433
                     /locus_tag="QF359_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85921.1"
                     /translation="MTASGKKPAPFHKNQIVDFIGGHREGVGIRNIMNGVGIKDRASI
                     KQAVKELDQAGEIERTGGNKYVLSGRLPQITVIEVTGTDDYGDVVATPLNWDREDEPP
                     IIFLNPDKRGKSRQAALGKGDRALARLTLIENNSYNASIIKRIGHAPKSVLGIYRE"
BASE COUNT          399 a          374 c          364 g          296 t
ORIGIN      
        1 aaaccgctgt cgacggcacg gctgatttac gcgtgcgcga agtactcgac aatcttaatg
       61 agattcttgg cccgcatttc ttccacggca acggtgacgg caacccgcgc caatgtccgt
      121 cttgtgccga tggtgagctg agtcttaaac ttggccgtca cggtgctttc attggctgtt
      181 caaagtatcc tgactgtcgc tatacccgcc cacttacaaa cggtgacggc aaaaatggtt
      241 ccgacattac cgatagcgga cccaaagttc tcggcactca cccagagctg ggctccgaaa
      301 tcacgctccg gcgcggccct tacggctttt atgttcagct gggcgagggt gaaggcaaga
      361 caaagccaaa acgatcttcg ctgtccaaag cgatggtctc ggccgaagtt gatcttgaaa
      421 tggcactaaa acttctcgaa ctgccacgtg aggttggcat ttacccagaa accggccaaa
      481 tgatcacggc tggcattggt ccgttcgggc cctttattaa attagccggt acctatgtgt
      541 cgctcaagga agatgacgtt ttgacgattg gcctcaaccg ggcgtgtgac ctgctggcca
      601 atgcacctaa aagacccgaa ccacgtgaag ttggtatcca tccccgcacc aaaaagccgg
      661 tgatgatgcg ctggggtcgt tggggaccgt ttgtccaaca tggcaagatt aaagccaata
      721 tgccgaaaga tatgaaggca cccaagggtg aagaagataa ccaaaaaaca ccaagtcttg
      781 aagaagcctt gacgtggctg gcagctaaag gtgacaaaac caaagctaag aaaaaagcgc
      841 ccgccaaaaa gaaaaagacg gcaactaaga aaaaagccac agccaagaag aatgcacctg
      901 aaatcgaagc aattcaagaa gccgagcctc ctgtagcacc tcaagaagat actagctcgt
      961 gacggcctcc ggaaaaaaac cggctccttt ccataaaaat caaatagtcg atttcatcgg
     1021 tggccatcgt gagggcgtcg gtatccgcaa tattatgaac ggtgtcggca tcaaagaccg
     1081 ggctagcatc aaacaagctg ttaaggaact tgatcaggcg ggcgagattg agcgcacggg
     1141 cggcaataaa tatgtgcttt ccggccgctt gccccagatt actgttatcg aagttaccgg
     1201 taccgacgac tatggcgatg tcgttgctac gccgctcaat tgggaccgcg aagatgagcc
     1261 gccgattatt ttcttaaatc ccgataagcg tggcaaaagc cggcaagccg ccctcggtaa
     1321 aggagaccgc gccttggccc gcctgacact gattgaaaat aattcctaca atgcctcaat
     1381 tatcaaacgt atcggccatg cacccaaatc agtgttgggt atataccgtg aag
//
LOCUS       DASCNL010000234         2154 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000530612, whole genome shotgun sequence.
ACCESSION   DASCNL010000234 DASCNL010000000
VERSION     DASCNL010000234.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000530612"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="QF359_03075"
     CDS             complement(<1..256)
                     /locus_tag="QF359_03075"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO85922.1"
                     /translation="MFKKIILAAPLAAMLAVPNAQAADTIKVGIVLTLTTPASIIGKN
                     MKAAFEVAHKHLGGKIGDKKLELIFEDDGLKPNIGKQKTEK"
     gene            complement(572..1030)
                     /locus_tag="QF359_03080"
     CDS             complement(572..1030)
                     /locus_tag="QF359_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4863 family protein"
                     /protein_id="HJO85923.1"
                     /translation="MSKDTFQALVQNITSSIAGKPLDKALAAELNDKFSTNSDTFKNI
                     QTACETAVKEGWMCDQEYGGIKFGRLFKDLDGFSVDVVHMADVVGPHHRHPKGEIDLI
                     MPISGDAKFDNHGAGWVVYGPETAHNPTVTDGTALVLYLLPDGEIDFTGQ"
     gene            complement(1035..1481)
                     /locus_tag="QF359_03085"
     CDS             complement(1035..1481)
                     /locus_tag="QF359_03085"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJO85924.1"
                     /translation="MKIPYTKRRRLLWGDCDPAGVVYTPQVFHIGMEIIEHWLVELIG
                     HDWVALHNEFELDTPTVRLGCEFMHPVRAGDEIELRLRIKKLGGSSINYIVDGFNEAE
                     ELCFEIDQVSCFVGADEFKPVRIPEDFRDKIAAYGAACGDLAEKEE"
     gene            1645..>2154
                     /locus_tag="QF359_03090"
     CDS             1645..>2154
                     /locus_tag="QF359_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase"
                     /protein_id="HJO85925.1"
                     /translation="MDGGTALARVTQGGERSFTKEIQKLTLSAGEEFHGEGILAVTKA
                     LLQSGVSYVGGYPGAPMSHLIDVLADASDEILEPMGITYEQSASEAGAASLLSASVHY
                     PLRGAVTWKSVVGTNVASDALSNLASTGVKGGSLIILGDDYGEGSSIMQERTYIFAMK
                     SSIPLMDPRY"
BASE COUNT          597 a          524 c          441 g          592 t
ORIGIN      
        1 gcttttcggt tttttgctta ccaatattgg gtttgagacc gtcatcctcg aatatcaatt
       61 cgagcttttt atcaccaatt ttaccaccaa gatgtttgtg ggcaacttca aaggcagctt
      121 tcatattttt gccgataatc gaagctggtg tcgtcagtgt caaaacgata ccgactttaa
      181 ttgtatcggc agcttgagcg tttggcactg cgagcatagc tgccaatggc gcagccaaaa
      241 tgattttttt gaacatatat aacctccctt aggtattatt gtccttaact atcaatacaa
      301 cctaaatatt aatcatatcg atttattcga tttaactgat tttattcagt aattgagaaa
      361 aaaagatata aaattctcta ttagttgtaa gtctaaatta tttggtggcc gaactataaa
      421 tttgaaatac cattgtgaca acacttagaa tgtaaccaat cgtaataaat acaattccac
      481 ctaggaaaaa cggccgacct gcaatcaatc gcccacccgt cacctgcaat actctatcga
      541 caaaggagag tctcaaaatc tccataagca atcattgtcc tgtaaagtcg atttctccat
      601 ccggcaatag atagagcacg agtgccgtgc catctgtcac ggtcgggtta tgcgctgtct
      661 ccggtccata gacgacccac ccggcgccat gattgtcaaa tttagcatcg cctgagatcg
      721 gcatgatgag atcgatctcg cctttgggat gacgatgatg tggaccaacg acatcggcca
      781 tgtgcacgac atcgacacta aatccgtcca gatctttgaa caggcggcca aatttaatgc
      841 cgccatattc ttgatcacac atccagcctt ccttgactgc ggtctcgcaa gcagtctgaa
      901 tatttttgaa agtatcactg ttggtagaga atttgtcatt caattccgct gccagcgcct
      961 tatcaagggg tttgccggca attgagctgg tgatattttg aaccagtgcc tggaaggtat
     1021 ctttgctcat cgtttcattc ctctttttca gctaagtcgc cacaggcagc accataggcc
     1081 gcaattttat ctctaaaatc ctcgggaatt cgaaccggct taaattcatc agccccgacg
     1141 aaacaagaaa cctgatctat ctcgaagcac aactcctccg cttcattaaa accatctaca
     1201 atataattga tcgatgaacc accaagtttt ttaattctta acctcagttc aatttcgtcc
     1261 ccagctcgaa ccggatgcat gaactcacaa cccagccgaa cggttggagt atctaattca
     1321 aattcattat gtagggcgac ccaatcatgg ccaatcaact caaccaacca atgttcgatg
     1381 atttccatgc cgatgtggaa aacttgaggt gtgtaaacga ccccggcggg atcgcaatca
     1441 ccccacaata aacggcggcg tttagtatag ggaattttca tgtcaaaaaa ttagtaacct
     1501 taattaattg ccgtaaaatg atcgaaataa cttcaaaata tgttgtgtct cagcaggtcg
     1561 tcccatatat taccaataat tgttcgatta ccaaacaata tttgattttt ggccaaaaac
     1621 aagaattagg tgtgagaata gcagatggat ggtggcacag cattagcgcg ggtgacacaa
     1681 ggcggtgaac gctctttcac taaagaaatt caaaaactta ccctcagtgc gggcgaagaa
     1741 tttcatggtg agggtatcct tgcagtcacc aaagccctgc tccaatccgg cgtctcttat
     1801 gtgggcggct accccggcgc gccaatgtcg catttgatcg atgtgctagc tgatgccagt
     1861 gacgaaatcc ttgaaccaat gggtattact tatgagcaat cagcctccga agcaggtgcc
     1921 gcctcgctgc tgagcgcttc tgtccattat cctttgcgcg gcgccgtgac ctggaaatct
     1981 gtagtcggca ccaatgtcgc ctcggacgcg ctgtcaaatt tggcttcaac cggcgtcaaa
     2041 ggcggctcac tgattatcct cggtgacgat tacggcgaag gctcctcaat catgcaggag
     2101 cgcacctata tatttgccat gaaatcttcg atcccactga tggacccgcg ttat
//
LOCUS       DASCNL010000235         1616 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000531973, whole genome shotgun sequence.
ACCESSION   DASCNL010000235 DASCNL010000000
VERSION     DASCNL010000235.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000531973"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="QF359_03095"
     CDS             <1..285
                     /locus_tag="QF359_03095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85926.1"
                     /translation="DYPIEFTFKKISDEVYEILFEDNRIEIMAEDLEHLHSQLSAILR
                     PETVAEKQNRHKELLENLTRTNVSGIQSLLHFADYDDVIILLETAEQNEG"
     gene            306..458
                     /locus_tag="QF359_03100"
     CDS             306..458
                     /locus_tag="QF359_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85927.1"
                     /translation="MTENATKMFVEDMIFIMREEVPNYKFDEAMTRLTQKVDDQTKDG
                     TLIIKP"
     gene            complement(477..839)
                     /locus_tag="QF359_03105"
     CDS             complement(477..839)
                     /locus_tag="QF359_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HJO85928.1"
                     /translation="MANGFEWNAERVEELTKLWATGLSASEIGRKLGITKNAVVGKVR
                     RLDLAMRRQPATPKVDRKVITLDSLKANMCSWPNGEPGTPEFRFCGKVAEPSKPYCAD
                     HCTIAYVPNIRKKATAVA"
     gene            1143..>1616
                     /locus_tag="QF359_03110"
     CDS             1143..>1616
                     /locus_tag="QF359_03110"
                     /inference="COORDINATES: protein motif:HMM:NF019844.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HJO85929.1"
                     /translation="MTRASVKRGAIIGTVFLLSLIVVTTVRATDPFEKVKLTPSVKTY
                     LVIKNINVREKPLTKSKRVGQFRNKSVVKAVGKAKGTKWVAVQKDGKNFGFVYGTALV
                     PMIDGKLTEPINGNLSTKTVGKMKLPPCHYQIQFEGRVKVEGDMQVTSDYQLPVQC"
BASE COUNT          464 a          358 c          370 g          424 t
ORIGIN      
        1 gattacccaa ttgaatttac cttcaaaaaa atatccgatg aagtttacga aatactgttt
       61 gaggataatc ggatcgaaat tatggccgaa gatttagagc atcttcactc tcagctatca
      121 gcaattctgc gcccggaaac ggtggcagaa aaacagaatc gccacaaaga actattagaa
      181 aatctaaccc gcaccaatgt cagtggtatc cagtcgctgc tgcatttcgc cgattatgat
      241 gacgtcatta ttctgttgga aactgccgaa cagaatgaag gctgaataaa aagctctaca
      301 gcaatatgac tgaaaacgcg accaagatgt ttgtcgagga tatgatattc atcatgcgcg
      361 aagaggtacc aaactataaa tttgatgaag cgatgacgcg ccttacccaa aaagtcgacg
      421 accagactaa ggatggcacc ctgattatta aaccctaact agcgttccga ttagacttaa
      481 gcgacagctg tggctttttt cctgatattg ggcacatagg cgatggtgca atgatccgca
      541 cagtaaggct tgctcggctc cgctacctta ccacaaaaac gaaactccgg cgtacctggc
      601 tctccgttcg gccaggaaca catattggct ttaaggctat ccaaggtaat gaccttacga
      661 tccactttag gggtcgctgg ttgccggcgc atcgctaagt caagacgccg aactttgccg
      721 actacagcgt ttttagtaat gccaagtttg cggcctattt cgctggccga aagacctgtc
      781 gcccataatt ttgtgagttc ttcaacgcgt tcagcgttcc attcgaagcc attcgccata
      841 atttaacctc cggattttcc cgatttagat gtatttccgg tggttaaaaa tcgcttttcc
      901 gacctcttac ctgagttttt ggaggtttct ccggccgaaa tagtaatgta tttgaccacc
      961 gtggcctact atatttagga cttaagttgg tcgtcaacac tatatttagg gttatccaca
     1021 agatattgaa tcaattttgc taatttaacg gcaaattaac gtaaaagaag gtggttacag
     1081 caattttggg taggtatcat tggttttgag gacaacttaa cgtttggttt ggggaaaaat
     1141 ttgtgacgcg ggctagcgtt aaacgtggcg cgattattgg gacggttttt ctgctgagcc
     1201 taatcgtagt gacaacggtg cgtgccactg acccgtttga gaaagtaaag ctgacacctt
     1261 cggttaaaac atatctcgtc attaaaaaca ttaatgttcg cgagaaaccg ttaaccaaat
     1321 caaaaagggt cggccaattt cgcaataaat ctgtggtcaa ggcagtcggc aaagccaaag
     1381 ggacgaaatg ggtcgccgta caaaaagacg gcaaaaattt tggctttgtc tatggcaccg
     1441 ccctggtgcc gatgattgac ggcaagctaa ccgagccgat caatggcaat ctgagcacca
     1501 agactgttgg caaaatgaaa ttaccacctt gccattacca gattcagttt gagggccggg
     1561 taaaagtcga aggcgatatg caggtcacat ccgactatca gttaccggtg caatgc
//
LOCUS       DASCNL010000236         2016 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000533429, whole genome shotgun sequence.
ACCESSION   DASCNL010000236 DASCNL010000000
VERSION     DASCNL010000236.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000533429"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /gene="amrB"
                     /locus_tag="QF359_03115"
     CDS             complement(<1..627)
                     /gene="amrB"
                     /locus_tag="QF359_03115"
                     /inference="COORDINATES: protein motif:HMM:TIGR04336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein B"
                     /protein_id="HJO85930.1"
                     /translation="MAPTSNTQSQLIRTPTVAGMFYPSNPKELEASVKYYLTEAAAKF
                     EPAAKSAPKAIIAPHAGYVYSGLTAAAVYNRLAPARDIIKRVVILGPCHRVAVNGLAL
                     PSTEVFATPLGEVPLDMDGVTSIVALPQVEIFNDTHIEDHSLEVHLPFLQKVLSAFSI
                     VPLIVGQASPEQIAEVLETLWGGPETLILISSDLSHYLAYDRAKTLDDQ"
     gene            complement(773..1195)
                     /gene="ndk"
                     /locus_tag="QF359_03120"
     CDS             complement(773..1195)
                     /gene="ndk"
                     /locus_tag="QF359_03120"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HJO85931.1"
                     /translation="MAIERTLSIIKPDATRRNLTGQINTRFEEAELRIVAQKRLHLTL
                     EQAQGFYAVHKERAFFDDLCSFMISGPVVVQILEGEDAITKNREVMGATNPANADDGT
                     IRKDFAESIEANSVHGSDTEKTATEEINYFFAQTEIVG"
     gene            1364..>2016
                     /locus_tag="QF359_03125"
     CDS             1364..>2016
                     /locus_tag="QF359_03125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO85932.1"
                     /translation="MLHINDMTYRIGGRVLYDSATIAIPDGQKVGLVGRNGSGKTTLF
                     RLIMEELSPDEGVINIHQKHKIGTVAQEAPSGPENLLDTVLAADAERAGLLVEAEIAT
                     DPARIAEIHTRLADIRAESAPARAATILSGLGFDEAAQQRACNEFSGGWRMRVALAAT
                     LFAEPDLLLLDEPTNHLDLEAVLWLENFLKRWRGTLVIISHERTLLNRSVDHIVHLE"
BASE COUNT          460 a          504 c          536 g          516 t
ORIGIN      
        1 ctgatcatcg agcgttttgg ctctgtcata ggcgaggtaa tggctgagat cggatgaaat
       61 gagaataagc gtttccggcc cgccccaaag ggtttccagt acttcggcga tttgttcggg
      121 gctcgcttgg ccgacaatca gtggcacgat gctgaaggcg ctcagaactt tttgcaggaa
      181 ggggagatgc acttccaaac tatggtcttc gatatgggtg tcattgaaaa tctcaacctg
      241 gggcagagcg acgattgagg tgacaccatc catatcaagc ggcacttcgc ccaacggcgt
      301 ggcaaaaacc tcggtgcttg gcagcgccag accattgacc gcgacccgat ggcagggtcc
      361 caagattacc acgcgcttga tgatatctcg tgccggcgcc agacgattat aaacggcagc
      421 ggcggtgagg ccggaataga cataaccggc atggggggca ataattgctt tgggcgcgct
      481 cttggcggct ggctcaaatt tggcggcagc ttctgtgaga taatacttca ccgaggcttc
      541 gagctcttta ggattgcttg gataaaacat ccccgccacc gtcggcgtgc ggatcaattg
      601 tgattgggtg ttggacgttg gcgccatgga gttttctccc tggcgttatt gtaggataat
      661 tttttatcga cagtcgatta attaattaag taatcgccaa ttcgccaact ccgggacata
      721 acaaaactgc ctcgtttaag agacaatttt tttcaaatat attcaataat tcttagccga
      781 cgatctcggt ttgggcgaag aagtaattga tttcttcggt tgcggttttc tcagtatctg
      841 agccatgcac cgaattggct tcgatgcttt cggcaaaatc tttacggatg gtaccgtcat
      901 cggcattggc cgggttggta gcgcccatga cttcccggtt tttggtaatg gcgtcttcgc
      961 cctcgagtat ctggaccaca acagggccgg aaatcataaa gctgcagaga tcatcaaaaa
     1021 acgcgcgctc tttgtgcaca gcataaaaac cctgggcttg ttccaatgtc aggtgcagtc
     1081 gtttttgcgc aacgatacga agttcagctt cttcaaagcg ggtattgatc tggccggtta
     1141 aattgcggcg ggtcgcatct ggtttaatta tcgaaagtgt ccgttcgatg gccatagccc
     1201 cgaacctcat ctgttatttc aaatattctt caatatcggc agattgctaa aaaccggcgc
     1261 cttatagccg gatcatcagt cgctggcaac tgatattttc agattacatt gatcctaaca
     1321 ctcatgcttt ccggctccgt tctggcatgc tacaccccgg cccatgctcc acatcaatga
     1381 catgacttat cggattggcg ggcgcgtgct ctatgacagc gcgaccattg ccatacctga
     1441 tggtcagaaa gttgggctgg tggggcgcaa tggctccggc aaaacaactc tttttcgcct
     1501 gattatggaa gaactttcac ctgatgaagg cgtcatcaat atccatcaaa agcataagat
     1561 tggtacggtt gcccaggaag cgccgagcgg gccggagaat ttgttggata ctgtgctggc
     1621 ggcggatgcc gagcgggcag gattattagt cgaagcagaa attgccactg atccggcgcg
     1681 tattgctgaa attcacacgc gtttggcaga catcagagca gaatcagccc ccgcacgcgc
     1741 tgccaccatt ctttcgggtc tcggtttcga cgaagcagcc cagcagcgcg catgcaacga
     1801 attttctggt ggttggcgga tgcgagtggc ccttgccgcc accttgttcg ccgagcccga
     1861 tcttttattg cttgatgagc cgaccaacca tctggatctg gaagcggtct tgtggctgga
     1921 gaattttctt aaacgctggc gcggtaccct cgtcatcatc agccacgagc gcacgctgtt
     1981 aaatcgctcg gtcgatcata ttgtccatct cgaaca
//
LOCUS       DASCNL010000237         1614 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000535427, whole genome shotgun sequence.
ACCESSION   DASCNL010000237 DASCNL010000000
VERSION     DASCNL010000237.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000535427"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="QF359_03130"
     CDS             <1..264
                     /locus_tag="QF359_03130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85933.1"
                     /translation="VNLTRANAYSVAQYTGLVNGVTGIAAPIMWVGGISFGALSVAAI
                     DERLPEGRRKEIAEILKYACTNIHQLPQAPNPREGFAMVGEQV"
     gene            277..1398
                     /gene="gntH"
                     /locus_tag="QF359_03135"
     CDS             277..1398
                     /gene="gntH"
                     /locus_tag="QF359_03135"
                     /inference="COORDINATES: protein motif:HMM:NF041257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanitoxin biosynthesis MBL fold
                     metallo-hydrolase GntH"
                     /protein_id="HJO85934.1"
                     /translation="MTTSNKTQATRGEYPEHYYPDTEELGENEMRIVALGTGRPFLRR
                     SQANASWLIELGNGDKFVFDYGFGSQMNFTALEMPYSDVNAWFATHLHTDHVGDFGQI
                     WVGSWAGGRLVPLEMYGPSGPEPKYSFKHFAEKQMESYAWDTDTRVGALPAIGAEINI
                     HEFDYSKSHVVYDQNGVQITSFPAVHLYDGAVSLRLDWNGLSFVYSGDTTPSQIFIDN
                     AKGADVVVHETFNTIEQLMDRSGYDERTARAIGTYIHSAPQEAAVVLKEVDPRLAIIF
                     HFFNDFDTAPEMQAKVREHYQGPLAMATDFMVVNVTKDEIVTRMAEVSEHVWPNKKKH
                     AGFGKAERKPMMQLSDWLKEAQLFPKFPSDRGLVNEDEL"
     gene            complement(1402..>1614)
                     /locus_tag="QF359_03140"
     CDS             complement(1402..>1614)
                     /locus_tag="QF359_03140"
                     /inference="COORDINATES: protein motif:HMM:NF020922.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 family protein"
                     /protein_id="HJO85935.1"
                     /translation="VAGDGLVRPPKGFDPKHKYIDDLKRQSYFAMRHTKPSSARSKNF
                     VDEVAQTFKAASPLMKFLNDALGQPY"
BASE COUNT          414 a          364 c          432 g          404 t
ORIGIN      
        1 gtaaatctca cccgggccaa tgcttattca gtagcgcaat ataccggctt ggtgaacggc
       61 gttaccggta tcgcggcgcc gatcatgtgg gtgggtggta tttcctttgg tgcactcagt
      121 gttgccgcca ttgatgaacg gctaccggaa ggtcgccgca aagaaattgc tgaaattttg
      181 aaatatgctt gcaccaatat tcatcaattg ccgcaagcgc caaatccccg cgaaggattt
      241 gcgatggtgg gtgaacaagt ttaaagggag aaataaatga cgacctcaaa taagactcaa
      301 gcaactcgcg gtgagtaccc ggaacattac tatccagata ccgaagagct tggtgaaaac
      361 gaaatgcgca tcgtggcgct tggcactggg cggccgtttc tccggcgttc gcaagccaac
      421 gcttcttggc taattgagct cggtaatggc gataagtttg tatttgatta tggctttggc
      481 tcgcagatga acttcacggc gcttgagatg ccctacagcg atgttaatgc ctggttcgca
      541 acccacttgc ataccgatca cgttggtgat tttggccaaa tatgggtcgg ttcctgggcc
      601 ggtggcaggt tggtgccgtt ggaaatgtac gggccatcag gaccggaacc aaaatatagc
      661 tttaagcatt ttgccgaaaa acaaatggaa tcttatgcct gggataccga cacccgcgtc
      721 ggcgcactgc cggcgatcgg tgcggagata aatatccacg aatttgatta ttccaaatcc
      781 catgtcgttt atgatcaaaa cggagtgcag attaccagtt ttccggccgt gcatctctat
      841 gatggtgcgg taagcctacg gctcgattgg aatgggctgt cgtttgttta ttccggcgat
      901 acgacgccaa gccagatttt catcgataat gcaaagggtg ctgatgtggt ggtccacgaa
      961 acctttaata ccattgagca attgatggat cgttccggct acgacgaacg gacagcgcgg
     1021 gcgattggca cttatattca ttccgctccg caggaagcgg ccgtggtctt gaaggaagtt
     1081 gacccccgtc tggctataat cttccatttc tttaatgact ttgatacagc acctgaaatg
     1141 caagccaagg tacgggagca ctatcagggg ccacttgcca tggcgacgga ctttatggtg
     1201 gtgaacgtaa ctaaagatga gattgtcaca cgtatggccg aggtctcaga acatgtttgg
     1261 cccaacaaga aaaaacatgc tggatttggt aaagcagaac gaaaaccaat gatgcaatta
     1321 tcggattggc taaaagaagc gcagctgttt cccaaattcc cttcggaccg gggattagtc
     1381 aacgaagacg aactttaaaa gttagtaagg ttgtcccaaa gcatcattta gaaatttcat
     1441 cagcggtgag gcggctttaa aagtttgtgc cacctcatcg acgaagtttt tagaacgcgc
     1501 cgaagaaggc ttggtgtggc gcatggcgaa ataagattgg cgtttgagat cgtcaatgta
     1561 tttgtgcttg gggtcgaatc ctttcggtgg ccttaccaag ccgtcaccgg caac
//
LOCUS       DASCNL010000238         1791 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000537138, whole genome shotgun sequence.
ACCESSION   DASCNL010000238 DASCNL010000000
VERSION     DASCNL010000238.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000537138"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     regulatory      <1..94
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            107..292
                     /locus_tag="QF359_03145"
     CDS             107..292
                     /locus_tag="QF359_03145"
                     /inference="COORDINATES: protein motif:HMM:NF021038.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtB domain-containing protein"
                     /protein_id="HJO85936.1"
                     /translation="MNEVKVLKQDAKPVALSQRLTAAVFGGLLGAFILLGVGFANADL
                     VHNAAHDSRHAISFPCH"
     gene            302..1183
                     /locus_tag="QF359_03150"
     CDS             302..1183
                     /locus_tag="QF359_03150"
                     /inference="COORDINATES: protein motif:HMM:TIGR02458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtA family protein"
                     /protein_id="HJO85937.1"
                     /translation="MLQRLLLTGLLSGAVAGVVLTLVHLTMLQPLIAEAEYYEEQGSA
                     PVAGVQHTHPGGISHMHSGGNIPHLHEQNFHIHAEGTAHVHAGATIGHIHSAQVAQAA
                     HDHGAHAHDSSAWSPEDGLERSLFTLGANLLTAIAFGLLLAAGFTLYGGSINLVQGMM
                     WGGAGFLSFSFLPGLGLPAELPAAAAGDLLARQAWWLGTAVASCIGLAIIAFGKSHAW
                     RAAGLLVLVIPHAIGAPPAEAGAVGAAPPELAAQYIMVTLFASAIMWSILGLMAAYVH
                     GRLAQDQTVTFAEPHAT"
BASE COUNT          422 a          407 c          450 g          512 t
ORIGIN      
        1 caataatctg ataattccgt gactgccccc gcaactgtaa gcatattggt aacacaatgc
       61 gagtcagata cctgccatca aaactgaaca cggagggtga attatcatga atgaagttaa
      121 agttttaaaa caagacgcca agccggttgc gctgtcacaa agactgaccg ctgcggtatt
      181 tggaggtctg ttgggcgcat ttatcctgct cggagttggc tttgccaatg ccgatttggt
      241 tcataacgct gcccacgatt ctcggcacgc tatttctttc ccctgtcatt agggggatcc
      301 catgttacag agattgctgc tgactgggct attgtccggc gctgtcgctg gtgtcgttct
      361 gacattggtg catttaacta tgttgcagcc gcttattgcg gaagctgagt attatgaaga
      421 acaggggagc gccccggtag ctggtgtgca acatactcat cccgggggta tcagtcatat
      481 gcattccggc ggtaacatac cgcaccttca tgagcaaaac tttcacatcc atgccgaagg
      541 cactgcccat gtgcatgccg gtgcgacgat cggccacatt cactctgcgc aagttgcaca
      601 agcagcccat gatcacggcg cccacgccca tgattcgtct gcttggtctc cggaagacgg
      661 tttggagcgc tcgcttttca ccctcggtgc gaatttgtta acagcgattg cctttggctt
      721 actgctggcg gcaggtttca cgctttatgg cggtagtatc aacttggtcc agggtatgat
      781 gtggggcggt gctggttttt taagtttttc atttctgcct ggattaggtt taccggctga
      841 actgccggct gctgccgcag gtgatctgtt ggcacgtcaa gcttggtggt taggtacggc
      901 ggtggccagt tgtattggct tggccataat cgcctttggc aaatcccacg cctggcgagc
      961 tgctggattg ttggtgctgg ttatcccgca cgcgattgga gcaccacctg cggaagccgg
     1021 tgctgttggt gccgcgccgc ctgaactggc agcacaatac attatggtga cgttatttgc
     1081 ctcagcaatt atgtggagta ttttgggact tatggcggct tatgtgcatg gccgccttgc
     1141 ccaggatcaa acagtaactt tcgccgaacc gcacgcgacc tgaatgttta gcaattgcag
     1201 ctgaaattga ttacacagcg ttgttaatat gttcgagata tttaatttta tagtcttccg
     1261 gaattcccag cgacgccttg gtttgagata gttcacgaaa cggtttttgc ttatttttgc
     1321 tggtgttaga cgggtgctga tactcaactg gtggattgtt gcaaagtcct tagcgttgcc
     1381 gacaacgacg gcgattttac acttacccaa ttgttgttcg atatgactca tttccgaggg
     1441 atgggaattc ttgacatatt gaaaattaaa cacctcagga agaggcgttg cacgaatatc
     1501 gcataagata ttcatccctg gtttatagct cggataagcc aacatcttgg acattagatc
     1561 gtcggcatca ttctctgaat aatgatcaaa atattggaca tatacgcagt ttaatcttgg
     1621 gtagataaaa aaaattagag gctgaccaag ctaacgccat ttaggtgtta tcatggggca
     1681 atgaatgcta tactacattg attttaaata ataaaatacc tcaataaaaa cgcaccaact
     1741 aggaaagcgt tattcgtatt tattttatca atctacgctt gattggccat a
//
LOCUS       DASCNL010000239         6385 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000538784, whole genome shotgun sequence.
ACCESSION   DASCNL010000239 DASCNL010000000
VERSION     DASCNL010000239.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6385)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6385)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6385
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000538784"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="QF359_03155"
     CDS             <1..770
                     /locus_tag="QF359_03155"
                     /inference="COORDINATES: protein motif:HMM:NF014820.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HJO85938.1"
                     /translation="LLTLGETAMTMFAPKANRYMHEYGLTKEQMAMVAVKNRKNGVLD
                     PYAQFRSEITVEDVLKSPTVCEPLNILDCCPQTDGAACLLICRADLADKFTDKPVFIA
                     GMGCGTDYYYQHEVESYTSYEATVKSAKEAYSMAGITPDQLDLAEVHDCFSITEIIDY
                     EDLGFCDRGEASQLIEKGVTEQNGDLPVNVSGGLLCKGHPLGATGVAQCAELYWHLRQ
                     EAGERQVEIKHGYGLQHNVGGRAISNSVVIILSNHTD"
     gene            923..1675
                     /locus_tag="QF359_03160"
     CDS             923..1675
                     /locus_tag="QF359_03160"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO85939.1"
                     /translation="MKLADKVAIITGGGRGIGQAGALELAREGAVIVISDIAEHDEVS
                     NTLAEIKRIGGKGIFIKTDVGDEDQVISLVDRSVESFGRVDILINCAGASDPAMLTNM
                     TLDKWFKVINSHLTGSFLCTREVARHMKGQNYGTIIFVSSIAGSEGTVGQCNYGAAKG
                     GMLGLMKSCAKELARYNINVNAVCPGVVETAMTETIRNDEKFREVTLNRILMGKFATV
                     DTIAPMFKYLASEDGHYIHGQTLYVDGGMFGL"
     gene            1704..2582
                     /locus_tag="QF359_03165"
     CDS             1704..2582
                     /locus_tag="QF359_03165"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO85940.1"
                     /translation="MSDTEIMEEEILAIDFMGYMFTKQYFEKYWFASDELRKLAEWWK
                     FDKVIRKGWTPDEMVALMDNAGVEKHCMMQFKMKSYKEDRIIIDVTDEEMAEVIEVHP
                     DRFIGFAGINPLLGMDGVRAMERGITEFGFKAAYLHVYGFNIPIDHRRLYPFYAKCEE
                     LDVPVSMQVGHSAESMPSEHARPMLLDNIALDFPGLTIVGTHTGWPWCEEMIAMAWKH
                     DNVYVGMDAHMPKYWDKSLQTFVKTRGQDKVLWGTNGPTAFTHDHILPQVHELGLKHS
                     VKKKLLRDNAIKVLGL"
     gene            complement(2589..3341)
                     /locus_tag="QF359_03170"
     CDS             complement(2589..3341)
                     /locus_tag="QF359_03170"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJO85941.1"
                     /translation="MSEDNLLTEIKDHVAILTLNRPVQANSLSHDLFIAIKDQLMALD
                     EDENVRVVIMTGTGDKIFCAGVDLKERGNMSEEVIWESRRVAVKPCFDAFRQFSKPII
                     AAINGLALGGGAEIALACDIRLATPNAQFAHTEINWGMIPAAGAHQRLRKVIGIGMAK
                     EIMYTGRKLEAEEAGRLGIYNHIYEPDELMPEAMKMANTIAGHSPLAVRQSKKVYDTY
                     TYSNDAFDFEYQASIECYTNGEAMTEAKRFKK"
     gene            complement(3355..3996)
                     /locus_tag="QF359_03175"
     CDS             complement(3355..3996)
                     /locus_tag="QF359_03175"
                     /inference="COORDINATES: protein motif:HMM:NF036525.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJO85942.1"
                     /translation="MTENAATLSDETAGAGGDGNKYKKGLETKEKILAEACELFDNLG
                     YANSSIRRLIRNIGKSSSVIYSHFADKEEILFVITHGTGVKVVDLLTKIMADTPNADA
                     CLEKMIVEMLLLMEQPRLKMEISIFNNEAHYLSDDRRKLVNEMHLEIVHQFEKAVAGV
                     YQKKGCTAVNKKIAAYNILAAINWVYVWYRDDGPLTLKEISEDVIRFVFHGLD"
     gene            complement(4258..4377)
                     /locus_tag="QF359_03180"
     CDS             complement(4258..4377)
                     /locus_tag="QF359_03180"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJO85943.1"
                     /translation="MEIEDNGPGISDQMKEQVLERFIRLDERDGFGSGLGLTV"
     gene            complement(4429..5424)
                     /locus_tag="QF359_03185"
     CDS             complement(4429..5424)
                     /locus_tag="QF359_03185"
                     /inference="COORDINATES: protein motif:HMM:NF014893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJO85944.1"
                     /translation="MLKIAVIGLGWWGKTIVDCLQESDRVRVVKGMDVDLEAVRGFAE
                     SKDLPLTDRYEDILADPGIDAVILVTPHGAHEEQVLAAAAAGKQIFCEKPLALTAVGA
                     KRMVDACTAKNIVLGVGHERRFESALEEMKRMLDEGELGTLLYLEFNASYNLFAGKPD
                     ARWRQDPKHAPAGTMTALGIHLTDYIQTLAGPVRELTARMSHRSDDFPNEDVLTVQFL
                     FESGVLGTFASMATTPFYQRMTVFGDRGWAEVREVANVDKPNPATLTWRDMDDDIHSR
                     TYKRIDTVTMNLHAWVDAVEGKGDYRFTPRELLHNIEILDAIVSSIESGKTVTIG"
     gene            complement(5546..>6385)
                     /locus_tag="QF359_03190"
     CDS             complement(5546..>6385)
                     /locus_tag="QF359_03190"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO85945.1"
                     /translation="GMVFQDLALFPHMTVFENIAFGLRVKKTLEPDIDRQVRAAAEAM
                     HILPLLGKRPAQCSGGESQRVALARTIVNDPSVFLMDEPLSSLDAKLRVDMRTELKAL
                     HERLNATFVYVTHDQAEAMTMADRIVVMNGGLVEQIGGPLDIYDKPASRFVAGFFGTP
                     TMNFLQGEIVAANGALTFQCEHIEHFLAENTPDSLAGKQVILGVRSEHVVVNSGGQQG
                     QVKLIEPLGDVSLVFFESGGQEQLVAKVAPELRFSSGDQLTFGFQAAKCHLFDFDSGT
                     RLN"
BASE COUNT         1519 a         1653 c         1627 g         1586 t
ORIGIN      
        1 ccctgctgac cttgggcgag acggccatga ccatgtttgc acccaaagcc aaccgctata
       61 tgcacgaata cggtctaacc aaggaacaga tggccatggt ggcggtcaaa aaccgcaaga
      121 acggcgtgct cgatccttat gcccagtttc gatctgaaat taccgtcgaa gatgtgctca
      181 aatcgcccac cgtctgtgaa ccactcaata ttctcgattg ttgtccccag accgacgggg
      241 cggcctgcct tttaatctgc cgcgccgatc tggccgacaa atttaccgat aagccggttt
      301 ttatcgccgg catgggctgt ggcacagatt attattacca acatgaagtg gaatcctaca
      361 cgtcctacga ggcgaccgta aaatcggcca aggaagccta ttcgatggcg ggcatcacgc
      421 cggaccaatt ggatttggcc gaagtgcatg attgtttttc gatcaccgaa ataattgatt
      481 atgaagattt aggattttgt gatcggggtg aggccagcca gttgattgaa aagggcgtca
      541 ccgaacagaa cggcgatttg ccggtcaatg ttagcggcgg tctattgtgc aaaggtcatc
      601 ctttgggtgc gactggcgtc gctcaatgcg cggagttgta ctggcacttg cgccaagaag
      661 ccggggagcg gcaagtggaa atcaagcacg gttatggcct gcagcataat gtgggtgggc
      721 gagcgatcag caattcagtc gttattattc tgtcgaacca tacggactaa aaagatcatc
      781 ggagttcaac catgccccaa ccgattacag gaactcgcct ttcggaccgc gtatttcttc
      841 tgattgatgg gggatattgc gcaacgcctg gcagtgatga aaatcagacg atgtattatt
      901 attccaaaag ggggagacta ttatgaaact ggctgacaaa gttgcgatca taaccggtgg
      961 cggacgcggc attggccaag ctggggcgct ggagcttgct cgcgagggtg cggtaatcgt
     1021 tatttccgat attgccgaac atgatgaggt cagcaacact ttggccgaga tcaaacgaat
     1081 tggcggtaaa ggaatattca tcaaaactga tgttggcgat gaagatcagg ttatctcctt
     1141 ggttgatcgg agcgttgaat ctttcggccg tgtggacatt ctgattaatt gcgctggagc
     1201 ctccgatcca gccatgctga ccaatatgac ccttgataaa tggtttaagg ttatcaactc
     1261 ccacctgacc ggttcgttct tgtgcacccg cgaagtcgcc cggcatatga aggggcagaa
     1321 ttacggcacg attattttcg tctcctccat cgccggctcg gaaggcacgg tgggccagtg
     1381 caattacggt gcggccaagg gcggcatgct gggattaatg aaaagctgcg ccaaggagct
     1441 ggcccgctat aacatcaacg ttaacgccgt ctgtcctgga gtggtcgaaa cagccatgac
     1501 tgaaaccatc agaaacgacg agaaatttag agaagtgaca ctcaaccgaa tcctgatggg
     1561 caaattcgca acggtcgaca ccattgcccc gatgttcaaa tatctagcat ctgaagacgg
     1621 ccattatatt cacggccaaa ctctttatgt cgacggcggt atgtttggtc tttaaaaatt
     1681 ggttcattta aaaggtacga ttaatgtctg atacagaaat tatggaagaa gaaattctgg
     1741 ctatagattt catgggctat atgttcacca agcaatattt tgaaaaatac tggtttgcca
     1801 gcgacgaatt gcgcaaattg gccgagtggt ggaagttcga caaggtcatc cgtaagggct
     1861 ggacccctga tgaaatggtc gccctgatgg ataacgctgg tgtcgaaaaa cactgcatga
     1921 tgcagtttaa aatgaaatcc tataaagaag accgtattat catcgatgtg acggacgagg
     1981 aaatggccga ggttatcgaa gttcatccgg accgcttcat cggctttgct ggcatcaatc
     2041 cactcctggg catggatggt gtccgggcta tggaacgggg cattacggag tttggtttca
     2101 aagccgctta tcttcatgtc tatggcttca acattcccat cgatcaccgc cggctctatc
     2161 ccttctacgc caaatgcgag gagttggacg tgcccgtctc aatgcaagtt ggtcactcag
     2221 cggaaagcat gcccagtgaa cacgcccggc ccatgctatt ggacaatatc gctctggatt
     2281 ttcccggctt gaccatcgtt ggtactcata caggctggcc ctggtgcgaa gaaatgatcg
     2341 ccatggcctg gaagcacgac aatgtatatg ttggcatgga cgcccatatg cctaaatatt
     2401 gggacaaaag cctacagacc ttcgttaaaa cccgtggcca ggacaaggtc ctctggggca
     2461 ccaatggccc caccgccttc acccacgatc atatattacc ccaagtccac gaacttggcc
     2521 tgaaacattc agtgaagaaa aaacttctca gggacaatgc gattaaggtg ctggggctat
     2581 agaatatttt atttcttgaa tcgctttgcc tcggtcatcg cctcaccatt ggtgtagcat
     2641 tcgattgatg cttggtattc gaagtcgaag gcatcatttg aataggtgta ggtgtcataa
     2701 acctttttcg attgccgaac cgccaatggt gagtgtccgg cgatggtatt tgccattttc
     2761 atagcttcag gcatgagttc gtcgggctcg taaatgtgat tgtaaatacc cagtcggcca
     2821 gcttcttcgg cctccaattt tcgaccagtg tacataattt ccttggccat gccgatgcca
     2881 atgacttttc gtagtcgctg gtgagcacct gcggccggaa tcatgcccca gttaatttca
     2941 gtatgagcga attgggcgtt gggtgtggcc agtctgatat cacaggccag cgcaatttcc
     3001 gccccgccgc ccagcgccag cccattgatg gcggcgataa ttggtttgga gaactggcga
     3061 aaggcgtcga agcaaggctt gacggctacg cggcggctct cccagattac ttcctcactc
     3121 atgttgccgc gctctttcaa atcgacgcca gcgcaaaata ttttgtcacc ggtcccggtc
     3181 ataatcacca ctcgtacatt ctcatcttcg tccaacgcca tcaattggtc tttgatggcg
     3241 ataaaaagat cgtggcttaa ggagttggct tgaacaggtc gattgagagt caagatggcg
     3301 acgtggtctt tgatttccgt taagagatta tcttcactca tcagtttaat tccattagtc
     3361 caatccgtga aaaacgaaac ggattacatc ttcactgatt tccttaagcg tcaatgggcc
     3421 gtcgtctcgg taccagacat aaacccagtt aatagcggca agaatattat aggcagctat
     3481 ttttttgttt actgctgtgc accccttttt ctggtaaacg ccggcaaccg ctttctcgaa
     3541 ttgatgaacg atctcaaggt gcatttcgtt gaccaattta cgcctgtcat cggataaata
     3601 gtgagcttca ttattgaaaa tggaaatctc cattttgagg cgcggttgct ccattagaag
     3661 aagcatttcg acaatcatct tttctaggca ggcgtcggca tttggtgtgt cggccataat
     3721 tttggtcaac agatcgacga ccttgacccc ggtaccatgg gtgatgacaa ataagatttc
     3781 ttccttatcg gcgaaatgac tgtagatgac cgaactgctt tttccgatat tcctaatcaa
     3841 ccggcggata gacgaattag cgtaacccag attatcaaat aactcgcaag cctcggcgag
     3901 aattttttct ttggtttcga ggcctttttt gtacttattt ccgtcaccac cggctccagc
     3961 agtttcgtca ctcaacgtag ccgcattctc agtcatgtaa aatataacct accctatgtt
     4021 accaaaccaa attgcgccca atattttttg tgaatgaaca tcaaaaacga atgagcgttt
     4081 tttatgttaa gagtctacac ggcgactgtc aacgaaccca acaaatcacc atttaacgtc
     4141 taacatcaac accctcggga catattgagg ggttttcata agaacgagtt atttgcagcg
     4201 gctttgacta ttctatcgct cattgttttt gttgcaggat taggctggct ttgtggatca
     4261 gacggtcaag cctaacccgc tgccgaaacc atcgcgttcg tcgaggcgta taaatctttc
     4321 caatacctgt tctttcattt gatcggaaat gccgggacca ttgtcttcta tttccaaatt
     4381 gatgccattg ttcccgcctg aataagttta tgaactctcg aatcgcggct aaccgatggt
     4441 tacggttttg ccgctttcga tcgagctcac aattgcgtcc agaatttcga tgttgtgaag
     4501 aagctcccgg ggggtaaacc gatagtcccc cttaccttcc accgcatcca cccaggcatg
     4561 caggttcatg gttaccgtgt cgatgcgctt gtaggtccgt gaatggatat cgtcgtccat
     4621 atcgcgccaa gtcagggtcg ccgggttggg cttgtcgaca ttagccactt cgcgcacctc
     4681 agcccatccc cggtcgccga agaccgtcat acgttgatag aagggagtcg tcgccatgct
     4741 ggcaaaggtg ccaagcacac cggactcgaa caaaaactgg accgtgagga cgtcctcgtt
     4801 ggggaaatcg tcggaacgat gggacatgcg cgcagtgagt tcccgcaccg gcccggctag
     4861 ggtctggata tagtcggtca gatggatgcc caacgccgtc atcgtaccgg cgggcgcatg
     4921 cttagggtcc tgccgccaac gtgcatccgg cttgccagcg aacagattgt aggaggcgtt
     4981 gaactcaagg tagaggagag tgcccaactc accttcatcc aacatccgct tcatttcctc
     5041 aagtgcgctc tcgaaccggc gttcgtggcc aacgccgagg acgatgtttt tggcggtgca
     5101 ggcatcgacc atgcgttttg cgcccaccgc cgtcagcgcc agaggtttct cgcagaaaat
     5161 ctgcttgccg gccgctgccg ccgcgaggac ctgctcttcg tgggcgccat ggggggtcac
     5221 cagaatgacg gcgtcaatgc cgggatcagc cagtatgtcc tcgtatctgt ccgtcagggg
     5281 caagtctttg ctttcggcga agccgcgtac agcttcaaga tccacatcca tgcctttgac
     5341 cacacggaca cgatcgctct cttgcagaca atcaacaata gtttttcccc accatccgag
     5401 gccgattacg gcgatcttta acatgttatc cccccccctg tttcaggttg ttctctgcga
     5461 taaatcctct tgggtcacat ccctgtgtag atgtatctgg tctcggcgac gctgcctgag
     5521 ccgccagtta cggatcaccc tcacttcagt tcagccgggt gccactatca aaatcgaaca
     5581 ggtgacattt cgccgcctga aaaccaaagg tcagttgatc tcctgacgaa aaccgcaact
     5641 ccggggccac cttggccacc agctgttctt gtcccccgga ttcaaagaac accaggctca
     5701 catcgccgag cggctcgatc agcttcacct gcccctgttg gccgcccgaa ttcacaacca
     5761 catgttcact gcgcacacca aggatcacct gcttgccggc caggctatcc ggtgtattct
     5821 ccgccaagaa gtgttcgata tgttcgcatt ggaatgtcag cgcgccgttt gcagcgacaa
     5881 tctcaccctg taggaaattc atcgtcggcg tgccgaagaa gccggcgacg aagcggctcg
     5941 ccggtttgtc gtatatgtcg agaggaccac cgatctgttc gaccaggcca ccgttcatga
     6001 ccacgatccg gtcggccatg gtcatggcct cggcctggtc gtgggtgaca tagacaaagg
     6061 tcgcgttgag ccgttcgtgc agagccttga gttcggtgcg catatcgacc cgcaatttgg
     6121 cgtcaaggct ggaaaggggc tcgtccataa ggaacacgga cgggtcattg acgatagtgc
     6181 gcgctaacgc gacacgctgc gattcgccac ctgaacactg ggccgggcgt ttgcccagga
     6241 gcggcagaat gtgcatagcc tcggccgcgg cgcggacttg cctatcaata tccggctcga
     6301 gcgtcttttt tacgcgcagg ccaaaggcga tgttctcgaa gacggtcatg tgaggaaaca
     6361 gagcaaggtc ctgaaagacc atccc
//
LOCUS       DASCNL010000240         1820 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000539697, whole genome shotgun sequence.
ACCESSION   DASCNL010000240 DASCNL010000000
VERSION     DASCNL010000240.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000539697"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            9..173
                     /locus_tag="QF359_03195"
     CDS             9..173
                     /locus_tag="QF359_03195"
                     /inference="COORDINATES: protein motif:HMM:NF019303.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HJO85946.1"
                     /translation="MQDKPARLIVQGVGERVEHYYDRPWASDETQAGQLVIIGLNGFD
                     HAAVKDALLN"
     gene            199..>1820
                     /locus_tag="QF359_03200"
     CDS             199..>1820
                     /locus_tag="QF359_03200"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF014563.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HJO85947.1"
                     /translation="MHLLVTQPGKISDGSEAVDLGQSPGDIVFLSAAASDLAILAEQH
                     RLKDYPSLRLANLMQLGHNMSVDVYVENTIAQAKLVIIRLLGGLGYWPYGIEQIREIC
                     IQNNIQLAVVPGDDTPDPELTQQSTLSADACHRIWQYCAQGGAINIQNLLNYASSLIG
                     DEREWVEPVPLVRTGLYWPGDILPDLDMVKSHWQEDQPVNAIVFYHALVQTSDLKPID
                     ALIDSLQTKGVNPLPVFVGSLKDPTSAEIVKALLQETPPDVILNATGFAVSSPADEGI
                     KTPYTEVDCPVIQVILSGGTFEEWDTGTRGLAPKDLAMNVALPEVDGRLISRAISFKK
                     SIQFDEATEVAVIKHEPVPSRIDFVTELAASWTRLRQTEASERRVAVIVANYPNKDGR
                     LGNGVGLDTPAGVIAAFKRMMREGYALGDTVPTTSKAIMHHLLAGPTNAAGERTGGKA
                     YATKDYLKFFNSLPQSIQNEVTDRWGAPEDDPFVTGEDFILPAHIFGNVILAVQPARG
                     YNIDPTSSYHDPDLVPPHGYLAFYTWLTHEKD"
BASE COUNT          429 a          465 c          499 g          427 t
ORIGIN      
        1 ccttagtaat tcaagacaaa cctgcgcgtt tgatcgttca aggggtaggt gagcgggtag
       61 aacactatta tgaccggccg tgggcgagcg atgaaactca ggccgggcaa ttggtcatca
      121 ttgggctcaa cggttttgac cacgctgccg ttaaagacgc cttacttaac taggacaaga
      181 gaagggtaaa gggacggtat gcatcttctc gtcacccagc caggaaaaat tagcgacggt
      241 tcggaagccg tcgatctcgg tcaatcgccg ggtgatattg tgtttttgtc ggcggcggcg
      301 agcgatctgg cgatcctcgc tgagcagcac cgcctgaaag attacccctc actcaggctc
      361 gccaatttaa tgcagctggg ccacaacatg tccgtcgatg tctatgttga aaataccatc
      421 gcgcaggcca aactcgtaat cattcgattg ctcggtggat tgggatattg gccgtatggt
      481 atcgagcaaa ttcgcgaaat atgtattcag aacaatattc agctggctgt cgtgccgggc
      541 gatgatacgc cggacccgga actaacccaa caatcgacct tgagcgctga cgcatgtcac
      601 cgtatttggc aatattgtgc ccaaggtggt gccattaata tccaaaacct tttgaattat
      661 gcgagttctt tgatcggcga cgagcgggag tgggtcgagc cggtgccgtt ggtgcggacc
      721 ggtctttatt ggccgggaga tatcttgccg gatttggata tggtcaaaag ccattggcag
      781 gaagaccaac cggttaatgc catcgttttc taccacgcgc tggtgcaaac ttccgatctc
      841 aagccgatag atgcgctaat cgatagctta cagactaaag gcgttaatcc actgccggtg
      901 tttgtcggca gtctcaaaga tccaacttcg gcggaaattg tcaaagcgct tttgcaagaa
      961 accccaccgg atgttatttt gaatgcgact ggttttgctg tttcatcgcc ggcagatgaa
     1021 gggatcaaga cgccttacac cgaggtagat tgtccggtaa ttcaagtcat attgtcaggt
     1081 ggcacgtttg aggaatggga cactggtacc cgcggacttg cgccaaaaga tctcgctatg
     1141 aacgtcgctt taccggaagt cgatggccgg ctgatctccc gggcgatttc gttcaaaaaa
     1201 agcatccagt ttgatgaggc gaccgaggtg gccgtgatca agcatgagcc agtaccttcg
     1261 cgcattgatt ttgtcactga actggcggcg tcttggacgc gcctccgcca gaccgaggcc
     1321 agtgagcgcc gggtggcagt catcgtcgcc aattatccca ataaagatgg caggcttggc
     1381 aatggggtag gtctggatac ccccgcgggc gtgatcgccg ccttcaaacg catgatgcgg
     1441 gaaggttacg cactgggtga cactgtgccg accacaagta aagccatcat gcatcacctg
     1501 ttggccgggc cgaccaatgc ggcgggcgag cgaactggcg gtaaagctta tgccaccaaa
     1561 gattatctca aatttttcaa ctcactgccg caatccatcc aaaacgaagt caccgatcgc
     1621 tggggtgcac cggaagatga tccgttcgta actggtgagg actttattct gcccgctcac
     1681 atattcggca atgttatttt ggcagtgcag ccagcgcgcg gctacaacat cgatccgacg
     1741 tcgtcttatc atgatcccga tctggtgccg ccccatggct acctcgcctt ttatacctgg
     1801 ctgacccacg agaaagatat
//
LOCUS       DASCNL010000241         1857 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000540908, whole genome shotgun sequence.
ACCESSION   DASCNL010000241 DASCNL010000000
VERSION     DASCNL010000241.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000540908"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1642
                     /gene="lepA"
                     /locus_tag="QF359_03205"
     CDS             <1..1642
                     /gene="lepA"
                     /locus_tag="QF359_03205"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HJO85948.1"
                     /translation="ITIKAQTVRLTYKSKNGKTYDLNLIDTPGHVDFSYEVSRSLAAC
                     EGSLLIVDTTQGVEAQTLANVYLALDADHEIVPILNKIDLQASEPERIKTQIENVIGL
                     DASDAIEISAKTGIGIEDVLEAIVERLPAPVGEAAAPLKALLVDSWYDPYLGVIILVR
                     VQDGKLARGMKVKMMSSGEKHQIDQVGVFKPKTTKVDELGPGDVGYFTASIKTVAETN
                     VGDTITDEKNPTAEPLSGFKPSVPVVFSSLFPTDAAEFEELRESLAKLRLNDASFVYE
                     PETSVALGFGFRCGFLGLLHLEIIQERLEREFDLDLITTAPSVVYRLHMTEGTEIELH
                     NPADMPEVTQIDFIEEPWIKATIMVPDEHLGGVLSLCAERRGEQVELTYADNRAMAIY
                     RLPLNEIIFDFYDRLKSTSRGYASFDYQMDGYKESDLVKVSILVNGELVDALSFMAHK
                     SQSEFRGRAICERLKDLIPRQLFKIAVQAAIGGKIIARSTISAMRKDVTAKCYGGDIT
                     RKRKLLEKQKKGKKRMRQFGQVEIPQSAFLAALKIGDD"
     gene            complement(1665..>1857)
                     /locus_tag="QF359_03210"
     CDS             complement(1665..>1857)
                     /locus_tag="QF359_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85949.1"
                     /translation="DFPISTYDDIVATVEEFDEHMALEDDNAPSKYERLIDFNPGAEP
                     DEDGGLGNELAIFNSTPKI"
BASE COUNT          457 a          477 c          474 g          449 t
ORIGIN      
        1 catcaccatc aaagcccaga cagtccggct cacctataaa tctaagaacg gtaaaaccta
       61 tgatctgaat ttgatcgaca cccctggcca tgttgatttt tcttacgagg tcagccggtc
      121 tctggcagct tgtgaaggct cgttgctgat cgttgatacg acccaaggcg tcgaagccca
      181 aacccttgcc aatgtctatt tggccttgga cgccgatcat gagatcgtgc cgatcttaaa
      241 taaaatcgac ctccaggctt cagaaccgga acggatcaaa acccagatcg aaaatgtcat
      301 tgggctggat gcgtcggacg cgattgaaat ctcagccaaa accggcatcg gtatcgaaga
      361 cgtgctggaa gccatcgttg agcgcctgcc ggcgccagtt ggtgaagcag cagcacccct
      421 aaaagcgcta ctggtcgatt cctggtacga cccctatttg ggcgtgatca tcttggtccg
      481 cgtgcaggac ggtaagttgg cccgtggtat gaaggttaaa atgatgtcgt ccggagaaaa
      541 acatcaaatc gatcaggtcg gtgtgttcaa acctaaaacc accaaagtcg atgagcttgg
      601 cccgggtgat gtcggctatt tcacggcgtc gatcaaaacc gtcgccgaga ctaatgtcgg
      661 cgacacgatt actgacgaaa aaaatccgac cgccgagccg ctctcgggtt ttaagccctc
      721 tgtgccggtg gttttctcca gcctgtttcc aacggatgcg gccgagttcg aagagctccg
      781 ggaaagcctg gccaaactgc ggctcaatga tgcaagtttt gtctatgagc cggaaacctc
      841 agtggcactc ggtttcggct tccgttgcgg ttttttaggc ctactccatc tggagattat
      901 ccaggaacgt ctggagcgtg agtttgatct cgaccttatt acgacagcgc cgagcgtggt
      961 ttaccgcctt cacatgactg aaggcacaga aatcgagttg cacaatcccg ctgatatgcc
     1021 ggaagtgacc cagatcgact tcatcgaaga gccttggatc aaggcgacca ttatggtgcc
     1081 ggatgagcac ctcggcggtg tcttgtcgct gtgtgccgaa cggcgtggcg agcaggttga
     1141 gctgacctat gccgacaacc gggcaatggc gatctaccgc ctgccgctca atgaaattat
     1201 ttttgatttt tatgaccggc tcaaatcaac ctcgcgcggt tatgccagct ttgactatca
     1261 aatggatggc tacaaagaat ctgatctggt caaagtttcg atcctggtca atggcgagtt
     1321 ggttgatgcg ctttctttca tggcccataa gagccagtcg gaatttagag gccgcgctat
     1381 ttgcgagcgc ctcaaagact tgatccctcg tcaattgttt aaaattgcgg tccaagcggc
     1441 cattggcggc aagatcattg cccggtcaac tatttccgcc atgcgtaaag acgtcaccgc
     1501 caaatgctat ggcggcgata ttacccggaa acgcaaactg ctcgaaaagc agaaaaaagg
     1561 caaaaagcgc atgcgtcaat tcggccaggt cgaaatcccg caatcggctt ttctggcggc
     1621 gctcaaaata ggtgacgatt aattttcgga ttttttggcg tcggctaaat ttttggggtc
     1681 gagttgaaaa ttgccaactc atttcctaat ccaccatcct catcaggttc agcccccgga
     1741 ttaaaatcaa taagacgttc atatttggag ggtgcgttat catcctccag cgccatatgt
     1801 tcatcaaact cttcgaccgt ggcgacaata tcgtcatagg tcgagattgg aaaatca
//
LOCUS       DASCNL010000242         1481 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000543745, whole genome shotgun sequence.
ACCESSION   DASCNL010000242 DASCNL010000000
VERSION     DASCNL010000242.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000543745"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..643
                     /locus_tag="QF359_03215"
     CDS             <1..643
                     /locus_tag="QF359_03215"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HJO85950.1"
                     /translation="AKLGCGGTLMLPPFYYKDVSDDGLYANFSEIIQKVGDPNLRIYL
                     YHIPPISNVPLSLDLIERLIKDYPETIVGIKDSSGDWSNTKVMLDAGWDDFRIFAGAE
                     SFLLDNMRNGGVGCISATANVNPAAIHNLYANWQSDEADELQAGLDVVRNIFQSYPMI
                     PALKAAAAIYGDDPDWCRVRPPLMALDEAQMAGLTQALQNIDFAMPGLKEAAD"
     gene            757..942
                     /locus_tag="QF359_03220"
     CDS             757..942
                     /locus_tag="QF359_03220"
                     /inference="COORDINATES: protein motif:HMM:NF018717.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HJO85951.1"
                     /translation="MARAAPAEVLEGSWQGRRTAIFEFPDMTTHDKFYYSDEYKPLVE
                     MRQKSADVTIIKIEGVK"
     gene            1155..1370
                     /locus_tag="QF359_03225"
     CDS             1155..1370
                     /locus_tag="QF359_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85952.1"
                     /translation="MVIGKISDDPKKHHSVLERMGNYLTNNLSSTLIEKSDVLVAKDL
                     EQMTDYLANGRVDLLSETAFSAMRLET"
BASE COUNT          398 a          329 c          353 g          401 t
ORIGIN      
        1 ggctaagctt ggctgtggtg gcactttgat gctaccgccg ttctattaca aagacgtcag
       61 cgatgatggt ctctatgcca atttctcgga gattatccag aaagtcggtg atcctaatct
      121 ccgcatttat ctttatcaca tcccgccgat ttctaacgtg ccgttgagcc tcgatctgat
      181 agaacgcctg attaaagact atccggaaac catcgtcggc attaaggaca gctcgggcga
      241 ctggtccaac accaaagtga tgctggatgc cggctgggat gatttccgca tttttgcagg
      301 cgccgaatct ttcttactcg acaatatgcg gaacggcggc gttggctgca tatcagcaac
      361 cgccaatgtt aatccggcag cgatccataa tctctacgcc aactggcaat cggatgaggc
      421 ggatgaattg caagctggcc tcgatgttgt ccgcaatatt tttcaaagtt acccaatgat
      481 cccggcgctc aaagccgccg ccgcaatcta tggcgatgat cccgattggt gccgcgtccg
      541 cccgccttta atggcgctgg atgaggcgca gatggcgggg ttgacccaag ccttgcaaaa
      601 catcgacttc gccatgcccg gtctcaaaga agcagcagat tagactcatg ccagcttatc
      661 tcttagctaa tattgaaaat gttcatgatc tagtactcct tggtgagtat gccgatctgg
      721 tggcgccgat gatcgaaagt tttggtggta agcgggttgg cacgagccgc cccggcggaa
      781 gttttggaag gcagctggca aggccggcga acggccattt ttgaatttcc ggatatgacg
      841 acgcatgata aattttatta ttcagatgaa tacaagccgt tggtcgaaat gcggcagaaa
      901 tcagccgatg tgacgattat caaaattgaa ggagttaagt aaggcagtta tgtccgccaa
      961 ttgagagctg ttatctattc caaaaattat gagaattgag tagggttaat ttctaaaatt
     1021 ggattctcac tgtggttgga ctttctttta tgaaataccc ggcacttggt ttgatatttt
     1081 tcctcactgc aactttccat ttcgttgttt cagttcaagc ataaaacttt ccgccgtcag
     1141 agcgatccaa aaccttggtt atcggtaaaa tatcggatga tccaaaaaag caccattctg
     1201 tattagaaag gatgggcaac tatttaacca ataatctttc atcaaccctt attgaaaaaa
     1261 gcgatgtgct agttgctaaa gatcttgagc aaatgaccga ttatttggcg aatggacgtg
     1321 ttgatctgct atcagaaaca gccttttcag caatgagatt agagacttaa accggtgccg
     1381 aaattattct ccatgaatgg aaaaaagggg taccttttta tcaaacggta ttctacgcgg
     1441 caaaagatag cggcataaaa tcactgcaag atttaaaggg t
//
LOCUS       DASCNL010000243         5231 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000546375, whole genome shotgun sequence.
ACCESSION   DASCNL010000243 DASCNL010000000
VERSION     DASCNL010000243.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5231)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5231)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5231
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000546375"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="QF359_03230"
     CDS             complement(<1..152)
                     /locus_tag="QF359_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85953.1"
                     /translation="MKMFNEFKKEIDLGGRKLTFETGKIARQADGAVMVTYGETKVLC
                     TAVGAK"
     gene            complement(392..661)
                     /gene="rpsO"
                     /locus_tag="QF359_03235"
     CDS             complement(392..661)
                     /gene="rpsO"
                     /locus_tag="QF359_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011253110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HJO85954.1"
                     /translation="MSITAERKQELITEYATKDGDTGSPEVQVAILSERINNLTEHLK
                     THKKDHHSRRGLLMMVGQRRRLLDYLNTKKSEHYEDLIKRLGLRR"
     gene            complement(676..1605)
                     /gene="truB"
                     /locus_tag="QF359_03240"
     CDS             complement(676..1605)
                     /gene="truB"
                     /locus_tag="QF359_03240"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HJO85955.1"
                     /translation="MARKRYGDSVHGWLVIDKAPDITSAKVVNRARKILNAAKVGHSG
                     TLDPMATGVLPLAFGEATKTVSYMMEDSKEYLFTVCWGEATDTDDAEGEIIETSDHRP
                     GRAEIEAALPDFIGEIDQIPPAYSAIKIDGERAYKLARDEKPLDLKPRKIIIERFELI
                     NCPDEAHASFEVTSGKGAYIRGLARDLARKLGTVGHISSLRRTRVGSFTENDAISLAK
                     LEELGHKGAAVDILRPVETALDDIPALAVTADEARRLRCGQSVSALTVAKRTPLTDIG
                     QGATICAMADGKVVALAKLKGGEIHPFRVLNFL"
     gene            complement(1609..2010)
                     /gene="rbfA"
                     /locus_tag="QF359_03245"
     CDS             complement(1609..2010)
                     /gene="rbfA"
                     /locus_tag="QF359_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HJO85956.1"
                     /translation="MSKRSKRPPSQRQLRVGEELRHVLAQVIERGDLHDPELDGVSIT
                     VTEVRISPDLSNATVFVMRLGGGHSAETVAALERATPFLRHQIAQRVHLRHVPNLTFE
                     ADTSFDYAEHISQILNDVTADNIEQAAEEDS"
     gene            complement(2052..4583)
                     /gene="infB"
                     /locus_tag="QF359_03250"
     CDS             complement(2052..4583)
                     /gene="infB"
                     /locus_tag="QF359_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HJO85957.1"
                     /translation="MTDTKEKTPKKKLSLSRPGKLELQKTVEGGQVRQSFSHGRSKVV
                     TVEVKKKRTFAPGSTGSMKEVKTDDKIALEAPVEESEVEEVVEEQSAAFAVPHNLTDQ
                     ERAARAQALLDAQKIEEERQNQPEPVLEPGLALEPEPEIEAVETPAAEAVPEIDEAKE
                     EAKKLRQAALDLEAVEAAAAKSNQDKIVVKEEEGTSSKRGKAQPKRPSPSPRQGERRR
                     RGKLTIAEALDDSERQRSLASVKRQRERQKRKEGPIEHVKIVREVTIPETISVQELSN
                     RMAERGVDVIKALMKMGVMANISQIIDADTAELIVEEFGHTLVRVSDSDVEIGLGDHE
                     DTEEDLKARPPVVTVMGHVDHGKTSLLDAMRNANVVFGEAGGITQHIGAYQTITEDNQ
                     KITFIDTPGHEAFTAMRARGAGITDIVVLVVAADDGIMPQTVEAINHAKLADVPIIVA
                     INKIDRPDTNANRVRTQLLEHELVLEAMGGDILDVEVSATEGTNIDKLEEAILLQAEI
                     LDLKANPDRSAEGVVVESRVEQGRGAVATVLVQRGTLKNGDIFVAGAESGRVRVLTND
                     QSENVEEAGPSVPIEVIGFQGAPDAGDEFFVVASEARAREVAEFRTNKNRIAKSAVAP
                     RGSLEEMFESIKAGEVKELPIVIKADVQGSVEAIIGMFEKLPQDEVKAQVLHSGVGGI
                     NESDVTLAGASNAAVFGFNVRANPQARDLARQDGVDIRYYSVIYDVIDDIKKLLIGMM
                     APIVRETFLGNAEVREVFNVSKIGKVAGCYVTNGEVKRGAGVRLLRDDVVIHEGSLST
                     LKRFKDDVHEIKESYECGMSFESYNDLKVGDVIECFDITEEAPEI"
     gene            complement(4617..>5231)
                     /locus_tag="QF359_03255"
     CDS             complement(4617..>5231)
                     /locus_tag="QF359_03255"
                     /inference="COORDINATES: protein motif:HMM:NF006622.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HJO85958.1"
                     /translation="GVNKLTRKKEPKKDSNRKCIFSGYSRPKSELVRFVVGPDGVIVP
                     DISERLPGRGLWLSASRDIIGEACAKNVFAKAARGQVSVPDDLSDRVEQLLRQRCLEI
                     IGLARRAGQMVGGYEKVSSYLKTESAGVLIAANDGAEDGRSKISALAPEIPLFDCFTG
                     GELGAAIGRDRLVHAIIAEGGFANSLSVEANKLVGLRKSSDPKM"
BASE COUNT         1220 a         1438 c         1137 g         1436 t
ORIGIN      
        1 tttttagcgc cgacagccgt acacaatact ttagtttcac cataggtaac catgacagca
       61 ccatccgctt gacgggcaat cttacccgtt tcaaaagtca gcttgcgacc gcctaggtct
      121 atttcttttt tgaattcatt aaacattttt attttccttc ctacatacgg aaaaatatat
      181 ctccaacttc ctacatgttc ttgccggcta ataagccgac cagaacatac ctacattcgg
      241 gtcctcagac ttttaaagga cccatccaac tgaattaatt tttcaagccg gattgaaccc
      301 acaaaatggg gtgttcacga aacgggaaag gcgccaaaca gagatagtta aattggctca
      361 cccttcctat tctttttcaa tggcccaagt cttatcgacg gagaccaaga cgcttgatca
      421 ggtcttcgta gtgttcggat ttcttcgtat taagataatc caataggcgc cgccgctgac
      481 cgaccatcat caacagccca cgacgggagt gatgatcttt tttatgcgtt ttaagatgtt
      541 cggtgaggtt gttaatgcgt tcgctcaaaa tcgcaacctg cacttcggga gaaccggtat
      601 cgccatcttt tgtggcatac tcagtgataa gctcttgctt ccgctctgcg gtaatcgaca
      661 tcatctactc caatcttata aaaagtttaa aacacgaaat ggatgaattt caccaccttt
      721 taatttagcc aaagcaacca cttttccgtc tgccatggca caaattgttg cgccttggcc
      781 aatgtcggta aggggtgttc gcttggccac ggtgagggcg gaaactgatt gtccgcatct
      841 caggcgacgg gcttcgtccg ctgtcacggc cagcgccggg atgtcgtcca gcgcggtctc
      901 aacaggccgc agtatgtcta cggcggcgcc tttatgaccc aattcttcta atttggctag
      961 cgaaattgca tcattttctg taaatgagcc gacacgggtg cgccggagac ttgaaatatg
     1021 tccaaccgtg cccaattttc gcgctaaatc acgcgctaac cctctgatat aagcgccttt
     1081 tccggatgtt acctcaaaac tggcatgagc ctcatcaggg cagttaatga gttcaaatcg
     1141 ctcgataatt atcttccgtg gttttaaatc cagtggtttt tcgtctcgcg ccaatttata
     1201 agcccgctca ccatcgattt tgatggccga ataggcgggc ggtatttgat ctatttcccc
     1261 aataaaatcc ggcagcgccg cttcgatttc tgctctgcct ggccggtgat cactggtttc
     1321 aattatctcc ccttcagcgt catcggtgtc cgtggcttcg ccccagcaca ccgtgaagag
     1381 atattcttta ctgtcctcca tcatatagga aacggttttg gtcgcttcgc caaaagccag
     1441 tggcaaaaca ccggtcgcca ttgggtcaag tgtgccgctg tggccaactt tggcagcgtt
     1501 gagaatttta cgggcccggt tgacgacttt agccgaggtg atatcgggtg ctttatcgat
     1561 caccagccag ccatgaacag aatcgccata tcgtttacgt gccattcttt aactatcttc
     1621 ttcggcagcc tgttcgatat tatcggcggt cacatcgttt aaaatttggc taatgtgttc
     1681 ggcataatcg aacgaggtgt cggcttcaaa ggttaggttt ggcacatggc gcaaatgtac
     1741 gcgctgggcg atctgatggc gtaaaaatgg tgttgcccgc tccaatgccg cgacagtctc
     1801 ggcagaatgg ccgcccccga ggcgcatcac aaaaactgtc gcattgctga ggtcggggct
     1861 gatgcgtact tcggtaacag tgattgaaac accgtctaat tcagggtcgt gcagatcacc
     1921 ccgttcaata acttgcgcta agacatggcg caattcttcg ccaacacgca attgccgttg
     1981 gctggggggc cgtttggatc ttttgctcat gtgattttcc cagattattg cttttggtct
     2041 aaatttctga cctaaatttc aggggcttct tcggtgatat cgaaacattc aataacatca
     2101 ccgaccttga gatcattata gctttcaaag gacatgccgc attcatagga ttctttgatt
     2161 tcgtgaacgt catctttgaa acgcttcagg gtcgacagac tgccctcatg gataaccaca
     2221 tcgtcgcgta acaggcgcac accggcccct cttttaactt caccattggt gacataacag
     2281 ccggcaactt tgccgatttt tgaaacattg aagacttcgc gaacttcggc attgcctaaa
     2341 aaagtttcgc gcacaatcgg cgccatcatg ccaatcagca atttcttgat atcatcaata
     2401 acatcataga ttaccgagta ataacggatg tcgacgccat cctggcgcgc caaatcacgc
     2461 gcttgcggat tggcccggac attaaagcca aacactgctg cattagacgc ccccgctaga
     2521 gttacatccg attcgttaat accgccgacg ccgctatgaa gcacctgagc cttgacttca
     2581 tcttgcggca atttttcaaa cataccaatg atcgcttcaa ccgaaccttg aacatcggct
     2641 ttaatcacaa tcggtagttc tttaacctca ccggctttga ttgattcgaa catttcttcc
     2701 agcgatccac gtggcgcaac tgccgattta gcgatacggt ttttattggt gcggaattcc
     2761 gcaacttcac gggcgcgggc ttcactagcg acaacaaaga attcatcgcc agcatctggc
     2821 gcgccctgga agccaattac ctcaattggt acggacggtc cggcctcttc gacattttca
     2881 ctttgatcat tggtcaaaac ccgcacccgg ccggattcag caccagcgac aaaaatatcg
     2941 ccgtttttca atgtgccgcg ctgaaccaaa accgttgcca cggcgccgcg gccttgttca
     3001 actctggatt cgacaaccac tccttcggcc gaacgatccg ggttggcttt gaggtcgaga
     3061 atttccgctt gcagcagaat tgcttcttcc agtttatcta tattggtgcc ttcggtagcg
     3121 gaaacttcga catcaagaat atcaccaccc atcgcttcca acaccaattc gtgttccagc
     3181 aattgcgtgc gcactcgatt ggcattagtg tcgggccggt caattttatt gatcgcgaca
     3241 atgatgggca cgtcagctaa ttttgcgtgg ttaatggcct caaccgtctg cggcatgatg
     3301 ccgtcatcag cagcaaccac caaaaccacg atatcagtga tgccagcgcc gcgtgcccgc
     3361 atagcggtaa aggcttcgtg acccggggta tcgataaagg taattttctg gttatcttcg
     3421 gtgatggttt gataggcacc aatatgctgg gtaataccgc ccgcttcgcc gaaaacaaca
     3481 ttagcgttgc gcatcgcatc caacagcgat gttttaccat gatcaacatg gcccatgaca
     3541 gttaccactg gtggccgcgc ctttaaatcc tcttcggtat cttcgtgatc gcccaagccg
     3601 atttcaacat ccgaatcact aacccgaacc aaggtatggc caaattcctc tacaatgagt
     3661 tcggctgtat cggcatcaat aatttgacta atatttgcca tcacacccat tttcatcagc
     3721 gctttaataa catcaacgcc acgttctgcc atccggttgg agagctcctg aaccgaaatg
     3781 gtttccggga tggtaacctc acgaacaatt tttacatgtt cgatcggacc ttctttacgc
     3841 ttctgacgtt cccgctgacg cttaaccgat gccagtgaac gctggcgttc ggaatcatcc
     3901 aacgcttcgg caatggtgag tttgccgcgg cggcgacgtt caccttgacg gggtgacggt
     3961 gaagggcgtt tcggctgtgc cttaccccgt tttgacgatg ttccttcttc ttctttgaca
     4021 acgattttat cttgatttga tttagctgcc gccgcttcca ccgcttccag atcaagtgct
     4081 gcttggcgta gttttttggc ctcctctttg gcttcatcaa tctcagggac agcttcagct
     4141 gccggcgttt caaccgcctc aatttccggt tcaggttcca gtgctaatcc tggctccagc
     4201 acgggttcag gctggttctg acgctcttcc tcgatctttt gcgcatccaa taaggcttgc
     4261 gcccgggctg cccgttcttg atcagttaaa ttatgaggaa ctgcaaacgc tgctgactgc
     4321 tcctcaacga cttcttcaac ctcggattct tcaacggggg cttctaatgc tattttatca
     4381 tccgtcttaa cttccttcat gctgccagtg gagcccggcg cgaaggttcg tttttttttc
     4441 acctcaacgg tgacaacttt tgaacggcca tgtgaaaaac tctgcctgac ctggccacct
     4501 tcaactgttt tttgcagctc aagcttaccc ggccgagaca aactcagctt tttctttggc
     4561 gttttttctt tcgtatccgt catgttaaac cgtcaactta cactttcaat tcaatactac
     4621 attttcggat cactgctttt ccgcaatcct actaatttat tggcttcaac cgacaaacta
     4681 ttggcgaacc caccttcggc aataatcgca tgaaccaagc gatcccggcc aatggcggca
     4741 cctaattctc cgccagtaaa acaatcgaac agcggtattt caggtgccaa agcactaatt
     4801 ttactacgac cgtcctccgc accgtcattg gcggcaatca aaacgcccgc tgattcggtt
     4861 tttaaatatg agctaacttt ctcatatccg ccaaccattt gtcctgcccg acgcgccaga
     4921 ccaattattt ccaggcagcg ctgccgtagc agctgctcaa cccggtcact taagtcatcc
     4981 gggacactta cttgcccgcg cgccgctttc gcaaaaacgt tcttagcgca ggcctcacct
     5041 ataatatccc gactggcact taaccacaaa cctcgaccag gcaggcgttc cgaaatatcc
     5101 ggaactataa cgccatcagg accaacaaca aaccgcacaa gttcagattt tggccggctg
     5161 taaccggaaa atatacattt gcggttcgaa tctttcttgg gttccttttt tcgcgtcagt
     5221 ttatttaccc c
//
LOCUS       DASCNL010000244         2656 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000547889, whole genome shotgun sequence.
ACCESSION   DASCNL010000244 DASCNL010000000
VERSION     DASCNL010000244.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000547889"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="QF359_03260"
     CDS             complement(<1..240)
                     /locus_tag="QF359_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HJO85959.1"
                     /translation="MNLQKIIGTAEKSFLAAAAVAVMAAWASPASAACSNRGDLDKRF
                     CDANGDLVADTPTDASKLLNPSTLVFSYTPVEDPAV"
     gene            complement(403..1191)
                     /locus_tag="QF359_03265"
     CDS             complement(403..1191)
                     /locus_tag="QF359_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HJO85960.1"
                     /translation="MKSINEFLAADRLRLKGVFLDIDETLTTKGRLTSGAYQALEGLH
                     DSGLLVIPITGRPAGWCDHIARMWPVDAVVGENGAFFFSYDQKERSMVRNYFFNSKKR
                     QEDRTKLVAIGEQILSVVPGTAISADQAYREADLAIDFCEDVPPLPEKDITRIVQIFE
                     DGGATAKISSIHVNGWFGDYNKLAMTKTLLQESYNISLDDEKTDFVFIGDSPNDEPMF
                     EYFPHSVGVANVRDFAAGLQSKPTYVTNSRSGVGFVEFANCLLG"
     gene            complement(1188..>2656)
                     /gene="glpD"
                     /locus_tag="QF359_03270"
     CDS             complement(1188..>2656)
                     /gene="glpD"
                     /locus_tag="QF359_03270"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HJO85961.1"
                     /translation="GAGIARAAAGTGLSVLLCEQNDLANATSSASTKLIHGGLRYLES
                     WHFGLVRKSLAEREVLLNIAPHIIHPLRFVLPHNAKMRPAWMLRLGLMFYDHLSKRVT
                     LPKHRSFKLSNHTAGKALAEPNTIGFEYSDCRVDDARLVILNAMAAAEHGAEVLTRTR
                     CAKLAKEGDGWVATLVSRNNPDTERLVRCKIVVNATGPWVADFRKATAGDASRLAIRL
                     VKGSHIVIPKLYDHEAAYIFQQSDNRIVFAIPYETDFTLIGTTESNFSGDASAAEIAA
                     DEIDYLLGVVNQYFIASISPAEIVWSFAGVRPLIGDETTKHSKLSRDYELNWTGAGSK
                     SPMLSIYGGKITTYRKLTEQAMRLISNEIGGLSTAWSSKAPLPGGDLGGLSFERFNTV
                     ASEKYSWMPQELCQRYSGTYGANMDMLIGDASSLDDLGQHFGSGLYEKEVVYLMQCEW
                     AQTVEDILWRRTKLGLRFSQNEAETLSHWLRSAEMATT"
BASE COUNT          711 a          665 c          584 g          696 t
ORIGIN      
        1 gacggcagga tcttctaccg gcgtatatga aaaaacgagc gtgctgggat taagcagttt
       61 gcttgcatct gttggtgtat ccgcaaccaa atctccattg gcgtcacaga aacgtttatc
      121 cagatctccc cggtttgaac atgctgcaga ggcaggcgac gcccaggcag ccataacggc
      181 tacagcagct gccgcgagaa acgatttctc agcagtgcca ataatttttt gtaaattcat
      241 tcgaatttcc tcctgttaca taattcggct ttctggtcct tattcggatt tttattatcg
      301 tcttagtatt tacgatattt accaatatct aaatcactct aacgtaggca cacttctgat
      361 aacaagttaa acttttatca ccttgcgggg tgaatttatt gattaaccca gcaagcaatt
      421 tgcaaactcg acaaatccga cccccgatct ggaattagtt acataggtcg gcttcgattg
      481 aagcccggcg gcaaaatcac ggacattagc gacaccgacg gaatgtggaa aatattcaaa
      541 catcggttca tcattgggtg aatcaccgat aaatacaaaa tcagtttttt catcatcgag
      601 tgagatatta taagactcct gcagcagagt tttggtcatg gccagtttgt tatagtcgcc
      661 aaaccagcca ttcacatgaa tgctgcttat tttcgccgtt gccccgccat cctcaaatat
      721 ttgcacaatg cgcgtaatat ctttttctgg aagaggcggg acgtcttcac agaaatcaat
      781 cgctaaatcc gcctcacgat aagcctggtc ggctgagatg gcggtacccg gaactaccga
      841 taaaatctgc tcgccaatcg ccactagctt tgttcgatct tcttgccgtt ttttactgtt
      901 aaagaagtaa ttacgcacca tactccgttc tttttggtca tagctgaaaa agaaagcgcc
      961 gttctcgccc accacggcat caaccggcca catgcgggca atgtggtcgc accagccggc
     1021 gggacgaccg gtaatcggga tgaccaatag accactatca tgcagtcctt ccaaagcttg
     1081 gtacgctcca gaagtcagcc ggcctttggt ggtcaaagtc tcatcgatat caaggaacac
     1141 accttttagg cgtagccgat ctgccgctag aaattcatta atggatttca tgttgttgcc
     1201 atttccgcgg atcgcagcca gtgcgagaga gtttcggctt cgttctggct aaaacgcaag
     1261 cccagtttgg tccgccgcca caaaatatct tcaacagttt gagcccattc acactgcatt
     1321 aaataaacca cttctttttc atataaccct gatccaaaat gttgacccaa atcgtcaagg
     1381 cttgatgcgt caccaatcag catatccata ttggcgccat atgtcccaga atatcgctga
     1441 caaagctctt gaggcatcca agaatatttc tcactggcaa ctgtgttaaa acgctcaaaa
     1501 ctcaaaccgc ccaaatcgcc accgggcagt ggagcctttg acgaccaagc ggttgagagg
     1561 ccaccaattt cgtttgagat aagtcgcatt gcctgttcag ttaattttcg ataggtcgtg
     1621 atttttccgc catagatcga gagcatggga gactttgaac cagccccggt ccagttaagt
     1681 tcgtaatccc gtgaaagctt agagtgtttc gttgtttcat cgccgattaa aggacgcaca
     1741 ccggcgaagg accagactat ttcagcagga ctgatactcg ctataaaata ctggtttacg
     1801 acgcctaaca gatagtcgat ttcatcagcg gcaatctcag ctgccgacgc gtcaccgcta
     1861 aaattgctct ccgtggtgcc gatcaatgta aaatcagttt cgtaaggtat ggcaaagaca
     1921 attcgattat cagattgctg aaagatatag gccgcttcat gatcgtacaa ttttggaatt
     1981 acaatatgac tgcctttaac taggcgtatt gctaatcgag acgcatcgcc ggcagttgct
     2041 ttccgaaaat cagcaaccca aggaccggtg gcattaacga cgattttaca gcgtactaaa
     2101 cgttcggtat caggattgtt tcgcgacact aaagtagcca cccatccgtc accttcctta
     2161 gccaatttgg cgcatcgcgt tctggtcaaa acctccgccc catgctcagc tgctgccatg
     2221 gcatttaaaa tgaccaatcg tgcatcatca acacggcaat cggaatattc aaagccgatg
     2281 gtgtttggtt cagccagcgc ctttccagcc gtatgattgg atagtttgaa agaacgatgt
     2341 tttggtagag ttacccgttt gctcaggtga tcgtagaaca ttagccccaa ccgcaacatc
     2401 caagctggtc tcattttagc gttatgggga agtacaaatc gtaacgggtg aattatgtgg
     2461 ggggcgatat taagcaaaac ttcccgctcg gccagtgatt ttcgaaccaa accgaaatgc
     2521 cacgattcca gatatcggag cccgccatga ataagtttgg tgctggctga agaagtggcg
     2581 ttggccagat cattttgttc acatagcaat accgagagac cagtgccggc agccgctcga
     2641 gcgataccag caccat
//
LOCUS       DASCNL010000245         2084 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000548519, whole genome shotgun sequence.
ACCESSION   DASCNL010000245 DASCNL010000000
VERSION     DASCNL010000245.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000548519"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1515
                     /locus_tag="QF359_03275"
     CDS             <1..1515
                     /locus_tag="QF359_03275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85962.1"
                     /translation="QWDEFSHWLPASQYLLAINGFPNNQLPYLGAFMIPGYPFGWPML
                     TYLSSLIAGQFLNNIGGVLNVLLLLTFSTFALRTALRVAGRELSVQINWGFAALIVLF
                     ATIFNPTFIQKIVLTAYSDVSTSVVTGFSFLLGYCFIESLARRIKLPPAAAALQLALA
                     LSLLVNVRQSNLVLFVIIVFAVTVLALRDQEINFGAYLRHLSLAVIPAIIIYLAWRYH
                     IVVSLGKVSNAELTLRAFDSWYIKDIPAIISQMGVVAFKKIGFFAPMLIACIFAIRGL
                     IRFETKFDRISVLVAVLFLGYTAFLLMMYVGYFGRPSALAVISFWRYSTHNGMVAVAF
                     ISTGLIYLFRHRLSQGQLPAWLNGFGILLVVALPLGLAHKLRFDLEPPKPHYTVVAKD
                     VAAIVDENSKILILDPYGTGESGLITRYYLGRVKTGWMSAFTQPSPARIKRQIVETKD
                     NNYILVHSLMVKGGQFFNNGQRISLNDKKSYLLRRVGAGWEITRSWQKPANHRN"
     gene            complement(1519..>2084)
                     /locus_tag="QF359_03280"
     CDS             complement(1519..>2084)
                     /locus_tag="QF359_03280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helicase C-terminal domain-containing protein"
                     /protein_id="HJO85963.1"
                     /translation="DQLATAYRELMKASGGGALGLFTSIARLRQVHQRLADTPEMEKL
                     MLLAQHVDPLDTGTLVDIFRAEENACLLGTDAVRDGIDVPGRALRLVVYDRVPWPRPT
                     ILHKARKADFEERHFGAKYDDMLTRLRLKQAYGRLVRRADDHGVFVMLDRAMPSRLTG
                     AFPEGVDVHRIGLAYVIREVKEFLNQR"
BASE COUNT          485 a          495 c          490 g          614 t
ORIGIN      
        1 caatgggatg aattttccca ttggctgccg gcgtcacaat atctcttggc cataaatggt
       61 tttccaaata accaactgcc ctatctcgga gcctttatga ttcccggtta tccctttggt
      121 tggcccatgc tcacctatct atccagtcta attgctggtc aatttctgaa taatattggc
      181 ggtgtgttaa atgtcctact gcttttaacg ttttcgacat ttgctctcag aacggctttg
      241 cgggttgccg gccgggaatt atcggtacag ataaattggg gatttgccgc tctcattgtt
      301 ttgtttgcaa caatatttaa tccgaccttt attcaaaaaa tagtacttac agcctattcg
      361 gatgtcagca catctgttgt taccggattc tcatttttgt tgggttattg ttttatcgag
      421 agccttgcca gacggattaa gctgccgcct gccgccgccg ctttgcaatt ggcattagct
      481 ttaagcctat tggttaacgt gcgtcaatcc aatctcgtat tattcgtgat catcgtcttt
      541 gccgtgacgg tactggcgct tagggatcaa gaaattaatt ttggtgccta tctgagacac
      601 ctctctcttg ctgtaatacc ggcgattatt atttatctgg cttggcgcta tcatattgtt
      661 gtcagcctcg gaaaagtatc caatgcggaa ttaacattaa gggcttttga cagttggtac
      721 attaaagata taccggcgat catttctcag atgggagtcg tggcatttaa gaaaatcggc
      781 tttttcgccc caatgctgat tgcttgcata tttgccattc gcggtctcat cagatttgag
      841 acaaagtttg atcgaatttc ggttctcgta gctgttttat ttttgggcta cacagcattt
      901 ctgttgatga tgtatgtcgg ctattttggc cgaccgagcg ctttggctgt gatttcattt
      961 tggcgttaca gcactcacaa tggcatggtc gccgtggctt ttatttcaac cggtttgatt
     1021 tatctgtttc gacatcgcct cagccagggt caattaccag cttggttaaa tggttttggc
     1081 attctgttag ttgtcgcttt accattagga ttggcgcaca aattacgctt tgatttagaa
     1141 ccgcccaaac ctcattatac tgtcgtggcc aaagatgttg cagcaattgt tgatgaaaac
     1201 tctaagatat taattcttga tccgtacggg actggcgaat ctgggttgat tacgcgatat
     1261 tatctcggac gggtaaagac cgggtggatg tccgctttta cccaaccctc accagcgcgg
     1321 ataaagaggc aaatagttga aaccaaagac aataattata ttttggttca ttctctcatg
     1381 gtgaaaggtg gtcagttctt caacaatggc caacgcatat cattgaatga caaaaaatcc
     1441 tacctgttgc ggcgtgttgg tgcgggctgg gaaatcactc ggagttggca aaaaccagcc
     1501 aaccatcgca attaatgtct agcgctgatt tagaaactct ttcacctcgc ggatcacata
     1561 cgccaagcca attcgatgaa cgtcaacgcc ttcgggaaag gcgcctgtga gtctcgatgg
     1621 catggcgcgg tcgagcatca caaacacacc gtgatcatcg gcccggcgga cgaggcggcc
     1681 atacgcttgt ttgagccgca gtcgtgtcag catgtcatca tattttgcgc cgaagtgacg
     1741 ttcttcaaaa tcagctttgc gggctttgtg caggatggtt gggcgcggcc acggcacccg
     1801 gtcatagacc accagccgga gcgcgcgtcc cggcacatca atgccatcac gcaccgcatc
     1861 ggtgccgagc aagcaggcat tttcctcagc cctgaaaata tcaaccaaag ttccggtatc
     1921 gagcggatca acatgctgag cgagcagcat taatttttcc atctcggggg tatcggccaa
     1981 acgttgatgg acttggcgta atctggcgat cgacgtgaac agcccgagcg caccaccacc
     2041 gcttgccttc atcaactcgc gataagcagt tgccaattga tccg
//
LOCUS       DASCNL010000246         1889 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000552174, whole genome shotgun sequence.
ACCESSION   DASCNL010000246 DASCNL010000000
VERSION     DASCNL010000246.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000552174"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..596
                     /locus_tag="QF359_03285"
     CDS             <1..596
                     /locus_tag="QF359_03285"
                     /inference="COORDINATES: protein motif:HMM:NF013618.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HJO85964.1"
                     /translation="SLYDSTAFPAPALPTKNGEVIDRSLILALIRQESGFNPKAKSHR
                     GARGLLQLMPRTASFIARDRTLHGSKRQRDILFDPETNVALGQKYIDILMKDARIKGD
                     LFRMVAAWNGGPGNLNKWTRKVKHDNDALLFIESIPSRETRIFVERVLTNYWIYQARF
                     GNPTLSLDLVAAGKWPSYQSEGESEVEVAEDGKNNIR"
     gene            610..1140
                     /gene="moaB"
                     /locus_tag="QF359_03290"
     CDS             610..1140
                     /gene="moaB"
                     /locus_tag="QF359_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HJO85965.1"
                     /translation="MSKVTGDRDFLPVNIAVLTVSDSRTLDDDKSGDTLVDRIEGAGH
                     VVIDRDIIKDDVPTIVARLQAWIGKDDVDVVISTGGTGVTGRDVTPEAFQSVYEKDIS
                     GFGELFRMLSFDKIGTSTIQSRATAGVAGGTYLFALPGSPGACKDAWDDILVHQLDYR
                     FKPCNFVELMSRLTEK"
     gene            complement(1170..>1889)
                     /locus_tag="QF359_03295"
     CDS             complement(1170..>1889)
                     /locus_tag="QF359_03295"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO85966.1"
                     /translation="GIIGTIIGAIPGAGANVASFLSYDIGRRRASEEECQKWGKGSYE
                     AIVCAEVANNANIGGSMLPTLTLGIPGNAAAAAILAALEMKNVVVGPTIQTENPGIIF
                     FIYIGLIIANFLMYGMAIALIKPCVKLFSLPRTLLMPLIIPICVMGAFAVALNYFDVY
                     LMFFAGIVGYVLHRFGFPLAPMVLAVILGPLADENMRRALLIFEDKEWWLILIDRPIG
                     TILLLIVIYTFYDGIFKRGKS"
BASE COUNT          491 a          466 c          491 g          441 t
ORIGIN      
        1 cgagcctgta cgatagtacg gcctttccgg cgccggcctt gccaaccaaa aatggcgaag
       61 taattgatcg ctccttaatt ctggcgctta tacgtcagga atctggtttt aatcccaaag
      121 caaaaagcca tcgtggcgct cgcgggttac tgcaattaat gccgcgcacc gcaagcttta
      181 ttgccagaga ccgcacactg cacggctcca agcgtcagcg agatatcctg tttgatccgg
      241 aaaccaatgt tgcgctcggt caaaagtata tcgatatttt gatgaaggat gcgcggatta
      301 aaggtgactt gttccgcatg gtggcggcct ggaatggcgg tcccggtaat ctcaataaat
      361 ggacccgcaa agtaaaacat gataatgatg cattgctgtt tatcgaaagt atcccgtcac
      421 gtgaaacgcg gatttttgtt gagcgcgtct tgaccaatta ctggatttat caagcgcggt
      481 ttggtaatcc gactctttcg ttagatttgg tggctgccgg taaatggcca agctatcaat
      541 ctgaaggtga atctgaagtg gaagtcgccg aagatggcaa aaataacata agatagaaag
      601 tcaaaaatca tgagcaaagt tacaggcgac cgggattttc tgccggtcaa tattgctgtc
      661 ttgacggtct ccgatagccg cactttagat gatgataaat ccggcgatac actggttgat
      721 cgcatcgaag gtgcgggcca tgttgtcatt gatcgggaca tcatcaaaga tgatgtgccg
      781 actattgtcg ctcggctaca ggcgtggatc ggcaaagatg acgttgatgt tgtgatctca
      841 acaggtggca ccggcgttac cggccgtgat gtcacaccgg aagcatttca atcagtatat
      901 gagaaagaca tctcgggctt tggtgaactg ttccgcatgc tgagcttcga taaaatcggt
      961 acctcaacca tacagtcgcg ggccaccgca ggcgttgccg gcggtaccta tctattcgcc
     1021 ttgcccggct cacccggtgc ctgcaaggat gcctgggatg atatcctggt ccaccagctc
     1081 gactaccgct tcaaaccctg caattttgtt gaactgatgt cccgcctgac ggagaagtag
     1141 aaaaggtacc tggtatcttt attacaatgt taacttttac cgcgtttgaa gataccatcg
     1201 tagaacgtat agattacaat cagtagcaaa atcgtgccga tcgggcggtc gatcaggatc
     1261 aaccaccatt ctttgtcctc gaaaatcaat agagcgcggc gcatgttttc gtccgccagc
     1321 ggacccaaga ttacggccag caccatcggc gccaatggaa agccaaagcg atgcagcacg
     1381 tagccaacta taccggcgaa aaacatcaga tagacatcga agtaattcaa ggcgacagca
     1441 aaggcgccca ttacgcaaat tggaatgatc agcggcatca acagcgtgcg gggcaggctg
     1501 aacagtttga cgcaaggctt tatcagcgcg atcgccatgc cgtacatcag aaaattggcg
     1561 atgatcaggc cgatataaat aaagaaaata ataccgggat tttcggtctg aatggttggg
     1621 ccgacaacga cgtttttcat ctcaagtgcc gccaggatcg ctgccgctgc cgcattaccg
     1681 ggaataccca aggttagggt cggcagcatt gagccgccga tattggcgtt attggcaact
     1741 tcggcgcaga cgatggcttc gtaggagcct ttgccccatt tctggcactc ttcttcactg
     1801 gcccggcggc gaccgatgtc atatgacaag aacgaagcga cattggcccc ggcacccgga
     1861 atagcgccaa tgatggtgcc gataatacc
//
LOCUS       DASCNL010000247         1807 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000553608, whole genome shotgun sequence.
ACCESSION   DASCNL010000247 DASCNL010000000
VERSION     DASCNL010000247.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000553608"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /locus_tag="QF359_03300"
     CDS             complement(<1..546)
                     /locus_tag="QF359_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HJO85967.1"
                     /translation="MNSHNLILASASKVRAQMLSNAGLSFSVEVSSVDEDAIKNPAGD
                     KSVEHIAEELAIIKAQKVSANRSDALVIGADQILECEGKLFDKPEERASGFTHLQSLS
                     GKLHRLITAAAVVQDGQVLWQATDDVRLTMRDLSDDFIEQYLDQAGEDVLASVGAYRL
                     EDIGAQLFRHVEGDFFTVLGLP"
     gene            complement(558..1367)
                     /locus_tag="QF359_03305"
     CDS             complement(558..1367)
                     /locus_tag="QF359_03305"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HJO85968.1"
                     /translation="MSEFHLYLISDATGETVESVARACLVQFEHTEPVEHIWNMVRSQ
                     RQIEDVIADIEERPGFVLYTLVNTEIRAQLQAACRHLNVPCVSVLQPIMSAFANYLDE
                     EGHAQPGLQHTLDEEYYGRISAMDFALNHDDGQATWNLEEADVIILGVSRTSKTPTCI
                     YLANRGIKAANIPIVLGHDMPEEVFKLDKPFVVGLIRDTRTLVQVRRNRLRMLAESDE
                     TTYADPDQVAEEVSYAKRLFAREKWQVIDVTRRSIEETAATIIQMRAHHVE"
BASE COUNT          517 a          436 c          363 g          491 t
ORIGIN      
        1 cggcagacca aggacggtaa aaaagtcgcc ttcaacatgc ctaaacaatt gagcgccaat
       61 atcttcaagc cggtaggcgc cgaccgaggc cagcacatct tcacccgctt gatccaaata
      121 ttgttcgata aagtcatcac tgaggtcgcg catggtcaga cgcacatcat ccgttgcctg
      181 ccatagcact tgaccatctt gaaccacggc agcggcggtg atcagccggt gcaatttgcc
      241 gcttaaactt tgcaaatggg tgaacccgct ggcgcgctcc tcgggtttat caaaaagctt
      301 tccctcacat tcaagaattt gatcagcgcc aattaccaaa gcatcggaac gattagctga
      361 cactttttgc gccttgatga tcgccagctc ctcagcaatg tgctcaaccg acttatcacc
      421 agcaggattt ttaatcgcat cttcatcgac actggagact tcaacactaa acgacagccc
      481 ggcattgctc agcatttggg cccggacttt gctggctgaa gccaggatta gattatgtga
      541 gttcatcgtc aggagttcta ctccacatgg tgagcacgca tttgtataat ggtcgcggct
      601 gtctcctcaa ttgagcgccg ggtaacatca ataacctgcc acttttcccg cgcaaataat
      661 cgtttggcat agctaacctc ttccgccact tggtctggat cggcataggt tgtttcatcg
      721 ctttcagcca gcatgcggag tcggttgcgg cgcacctgta ctaaagttcg ggtatctctt
      781 atgagcccaa caacaaacgg tttatcgagc ttaaatactt cctccggcat atcgtgaccg
      841 agcacaattg ggatattggc agcctttatg ccgcgattgg caagataaat acaggtcggc
      901 gttttagatg ttcgtgacac acccaatatg attacatccg cttcttcaag attccaggtc
      961 gcctgaccat catcatggtt caaggcaaaa tccattgccg agatacgacc ataatattct
     1021 tcatcaagtg tatgctgtag gccaggctga gcgtggcctt cttcatcgag ataattcgca
     1081 aatgcagaca taattggttg taagaccgaa acgcatggca catttaaatg ccggcaggcg
     1141 gcctgtaatt gggctctaat ttcagtattc accaaggtat aaaggacgaa gccaggccgt
     1201 tcttcgatgt cggcgataac atcttcgatc tgacgttggg agcgcaccat attccaaata
     1261 tgttcgaccg gttcagtgtg ctcaaattgg acaagacagg cgcgcgctac agattcaact
     1321 gtttcaccgg tcgcatcgga aatcaaatat aaatgaaatt cagacatatt ttctgttaat
     1381 tctgtgcata aattcctagt acggttatgg gataaattgg ggataagata gatataacaa
     1441 tgtttaccaa aaacttattc gaaactaccc ttcaataaat atccgcttat ctaaaatgta
     1501 taatcctaac ctaatcagct taaacaaaat gacaatctaa attgaactaa acttatcccc
     1561 gattatcaca ccaagcacct ttatggcttg gtgactactt taattctgac aaactcgcca
     1621 aaatctgatt cttagtaccg cttatccata ttttattcta aataaacccc actataaaat
     1681 ttctaaaaaa ctttggggat tttttatgga taaactgagg ataaaaaata atcccctaga
     1741 ttcaggttac aacaacaaca acctatttta tatatattat atatatagta gtagattcct
     1801 gggataa
//
LOCUS       DASCNL010000248         2580 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000556745, whole genome shotgun sequence.
ACCESSION   DASCNL010000248 DASCNL010000000
VERSION     DASCNL010000248.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000556745"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="QF359_03310"
     CDS             <1..735
                     /locus_tag="QF359_03310"
                     /inference="COORDINATES: protein motif:HMM:NF012927.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase"
                     /protein_id="HJO85969.1"
                     /translation="GKFEDAVHTPGEILHGYSGYSGERCMPGANHSDMLHVHLADEIK
                     SFINAKGYDTPIVTAGKISNPDHAKTVIDEGKADIVGIARGLLADADWVVKVRDNQED
                     RIVHCTYCNVCKELDGAHKEVICFLWPKHARQAPADQPDSDAPTWGADGGGLKVKLEE
                     GIAELNWSKARGEVSGYDIYRADDNGEVKIIEAVKGSRMADRSILAGMPYRYYVRAYN
                     KVGRASVPSTSVQIDPTLPDYSVVVA"
     gene            772..2424
                     /locus_tag="QF359_03315"
     CDS             772..2424
                     /locus_tag="QF359_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO85970.1"
                     /translation="MLAGCTPWPQEFQRRYRAAGYWQDITLWRMFVESAARTPNNIAV
                     VFENRRVTYRELEQRINRLASKFAERGLRNRDRVIFQLTNSLEFVYAFFALVKIGTVP
                     VMALPAHRRTEISHFVQHSEAVGYLIPDQVRGFDYRELAADIAGVFPDLQHIIVAGSA
                     NEGQVSITDLLAGTDEAGSENQADQGDPADVALMLLSGGTTAMPKLIPRTHNDYVYNC
                     RQSGVVSAIDADTVFLALLPMAHNYNLGCPGVLTTLASGGRVVIAAGTDPEQVFPLIA
                     RERVSFISSAVPLLTKWLTSEVPERHDLSSIKNIMNGGAKLAPELRRRVQQMFGCVFQ
                     ESFGTGEGLLNTTRLDDDDDVILHSSGKPISPGDEIKIVDENGGEVADGATGELICRG
                     PYTIRGYYRAPETNATAFTRDGFYHTGDLVSRRGGYLYVEGRIKDLINRGGEKISIDE
                     VENHILADDRVENVCIVAMPDQHYGEKACAFVRLKDGQSLTFDELKAFLLDRGIAKFK
                     LPERLEIIANFPLSPAGKILRQELRRIIEETLADKSDKEPSG"
BASE COUNT          605 a          682 c          707 g          586 t
ORIGIN      
        1 ggcaagttcg aagatgccgt tcacactccc ggcgaaatcc tccacggcta ttccggctat
       61 tcgggtgaac gctgcatgcc cggcgccaac cattcggata tgctccatgt ccatttagcc
      121 gacgagatca aatccttcat taatgccaaa ggctatgaca cgcccatcgt gacggcaggc
      181 aagatttcta atccggatca tgccaaaacg gttatcgatg aaggcaaagc cgatattgtc
      241 ggtatagcac gtggtctact ggccgacgct gattgggttg tgaaagtgcg cgataaccaa
      301 gaagaccgca ttgttcactg cacctattgc aatgtctgca aggagttgga cggtgctcat
      361 aaagaggtca tttgcttctt gtggcctaaa cacgcccgcc aagcgcccgc cgatcagccc
      421 gatagcgatg cgcccacttg gggtgctgac ggtggtggat tgaaagtcaa attggaggaa
      481 ggtatcgccg agctaaactg gtcgaaagcc aggggtgagg tttcaggcta cgacatttat
      541 cgcgccgacg acaatggaga ggtcaagatc atcgaggccg tcaaaggctc ccggatggca
      601 gaccggtcca ttttggccgg catgccttac cggtattatg tccgcgccta caataaagtt
      661 ggccgggcga gtgtcccgtc gaccagcgtc cagatagatc cgactttgcc agattattcc
      721 gtggtggttg cttagccgcc gcaaatcaaa aattatcagg ggagaataaa tatgttggca
      781 ggttgtacgc cgtggccgca agaattccag cgccgttacc gcgccgccgg atattggcag
      841 gatattacgc tttggcggat gttcgtggaa agtgccgcca gaacccccaa taacatcgcc
      901 gtggtgtttg aaaaccggcg ggtaacctac cgggagctcg aacagcgcat caaccggttg
      961 gctagtaaat ttgccgaaag ggggctaaga aatcgcgatc gagtgatctt ccagttgacc
     1021 aattcactgg aatttgttta tgcttttttc gccttggtca aaattggtac tgtcccggta
     1081 atggccttgc cagcccatcg gcgcaccgag atcagccatt ttgttcaaca cagcgaagcc
     1141 gtcggatact taattcccga tcaggtccgt ggctttgatt accgtgaact ggcggcggac
     1201 atcgccggtg tttttcctga ccttcaacat attatcgttg ccggctctgc caacgaagga
     1261 caagtttcga tcaccgatct gcttgccggg acggatgagg ccggctctga gaatcaggcc
     1321 gatcagggtg atccggcaga tgtcgccctg atgttgttgt cgggaggcac gacggcgatg
     1381 ccgaaactga ttccacggac ccacaacgac tacgtataca actgccgaca aagcggtgtt
     1441 gtcagcgcca ttgatgccga taccgtcttt ctcgcgttgc tgccgatggc tcacaattat
     1501 aatctcggct gccctggtgt tctgacgaca ttggcctctg gcggccgcgt ggtgattgcc
     1561 gccggcaccg atcccgaaca ggtgtttcca ctgatcgccc gggaacgcgt cagctttatt
     1621 tctagcgcgg tgccgttgct caccaaatgg ctaacttccg aagttcccga acggcacgat
     1681 ttaagctcga ttaaaaatat catgaatggc ggcgccaaac tggcgcccga attgcgccgc
     1741 cgcgtccagc agatgttcgg ctgcgtattc caggaaagtt tcggtaccgg cgaaggcctg
     1801 ttgaacacca cccgcctcga tgacgatgat gatgtgattc tgcacagttc gggcaagccc
     1861 atttcgcccg gcgacgaaat taaaattgtc gacgaaaacg gcggcgaagt ggcagacggc
     1921 gcaacaggcg agctgatctg ccgcggtcct tacaccatcc gaggctatta ccgggcgcct
     1981 gaaaccaacg ccaccgcttt tacccgggac ggcttttacc acaccggtga tttggtcagc
     2041 cgccggggtg gttatctcta tgtcgaaggc cggatcaaag atctgatcaa ccgcggcggt
     2101 gaaaaaatca gcatcgatga agttgaaaac cacattcttg ccgatgaccg tgtagaaaac
     2161 gtctgcatcg tcgccatgcc ggaccagcat tatggagaaa aggcctgcgc ctttgtcagg
     2221 ctgaaggacg gtcagagcct gacgtttgat gaattgaagg cttttttgct cgaccgtggc
     2281 atcgctaaat tcaaactacc ggagcgccta gaaatcatcg cgaatttccc attgagtcca
     2341 gcggggaaaa ttttgcgcca agaactgcgc cggatcatcg aggaaaccct ggccgataaa
     2401 tcagacaagg aaccatccgg atagctgcaa agagtccgct aatgacccaa tgtatggacc
     2461 gaccgtgtgt tgcaagaatt aatttgagat agcgggtttg gtcatgcgtt aatgtattcg
     2521 gcttcattgt ggaacttatg ttccgagcca tcatgggtat cagcgcacat tcgatctcat
//
LOCUS       DASCNL010000249         2113 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000556948, whole genome shotgun sequence.
ACCESSION   DASCNL010000249 DASCNL010000000
VERSION     DASCNL010000249.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000556948"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="QF359_03320"
     CDS             complement(<1..258)
                     /locus_tag="QF359_03320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85971.1"
                     /translation="MIRRTFHSVVQLIGILGLGFAVFVGVLVWRLSTGPISLAFLTPY
                     FESALKTAESRVDIKLEDTILTWAGWDQSLDIRLRGAKAIGP"
     gene            378..>2113
                     /locus_tag="QF359_03325"
     CDS             378..>2113
                     /locus_tag="QF359_03325"
                     /inference="COORDINATES: protein motif:HMM:NF010706.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85972.1"
                     /translation="MTFFTNAINLPKPASIDRAELGIDRLIQVSEETGDDVFISNINA
                     MTSNGEYRPFLDALFGNSPFLSHCVNTDPIFFLELIMAGPEASFKKIEQELTKKPENL
                     DEPKVMQFLRIHRKQGALTIAAADIAGLWTGPEITQALSRFSDLYVQYAINFLLKNMA
                     AKKILNLPDENNPGEGSGLIVLGMGKLGSHELNYSSDIDLIFFFDPEVIETDQPKNLA
                     KGFIRLARDLVKILSERTADGYVFRTDLRLRPDPGSTPLAISVLAAETYYESIGQNWE
                     RAAMIKARPIAGDISAGHEFLERLRPFIWRKYLDFATIQDVHSIKRQINAHRGGAEIA
                     VEGHNVKLGRGGIREVEFFVQTQQLIWGGRLPELRTAPTCESLNGLAVAGQISQETAD
                     ELIISYWFLRRVEHRLQMVDDQQTHDLPSDADGIEQIAIFLGYESGDAFREELLSHLN
                     CVEAHYAQLFEDAPRLDGTDEIKGNLIFTGADDDPETLNTIKSIGFAQPEIIAETVRT
                     WHHGRYRATSSTRAQQILTELVPVILKAFSETPEPDIAFRKFDDFLAALPAGIQLFSM
                     FHAHPTLLNLVA"
BASE COUNT          555 a          535 c          491 g          532 t
ORIGIN      
        1 cggaccaatc gctttagcgc cgcgcaaacg aatatccagg ctttggtccc aaccggccca
       61 agtcaggatg gtgtcctcaa gcttgatatc aacccggctt tccgcagtct tcagggcaga
      121 ttcaaaatag ggcgtcaaaa aagcaagaga aatgggaccg gtcgacaatc gccataccag
      181 gacgccgacg aaaacggcaa aaccaagtcc taaaatacca attagctgga caacgctgtg
      241 gaacgtccgc ctgatcaatt atctaactcc attcgtggcc ggcagtttgt aaatttctgt
      301 ctttcattgc aacaacttga ccacctctcc ctcttaacgc agtctgctat atctgacagc
      361 aatttgaaat gcatcaaatg acttttttta ccaatgcgat caatttgccc aaacctgcct
      421 caattgatcg cgcagaactc ggcattgacc gtctgataca ggtttcagaa gaaaccggcg
      481 atgatgtctt catttcaaat atcaacgcca tgacgtctaa tggtgaatat cgcccttttt
      541 tagacgccct ctttggcaat agtccttttc taagtcactg cgttaatact gatcccattt
      601 tctttcttga attgattatg gctggtccag aggcaagttt caaaaaaatt gaacaggaac
      661 ttactaaaaa acctgaaaat ttagatgaac ccaaagttat gcagttcctg cgcattcacc
      721 gtaaacaggg cgctcttacc attgcggcgg cggatattgc cgggctgtgg accggacccg
      781 agataaccca agcgcttagc cggtttagcg acctctacgt ccaatacgca attaatttct
      841 tgctgaaaaa tatggcggcg aagaaaattc ttaacttgcc ggatgaaaac aatcccggcg
      901 aaggctccgg tctgatcgtg cttggtatgg ggaaacttgg cagtcatgag ttaaattatt
      961 ccagcgacat tgacctgata tttttttttg atccggaagt catcgaaacc gaccaaccta
     1021 aaaatttggc caaaggtttt atccggctgg ctcgtgatct ggttaagatc ctctccgagc
     1081 gcacggccga tggttatgtt tttagaaccg atcttaggct aagaccagat cctggctcga
     1141 cgccactggc aatatctgtc ctggcggccg aaacatacta cgaaagcatt ggccagaatt
     1201 gggaacgtgc agcaatgatt aaagcacgcc caattgccgg cgatattagc gccggtcacg
     1261 aatttcttga gcggcttcgt ccttttatct ggcgcaaata tctcgacttc gccaccatcc
     1321 aggacgtcca ctcgattaaa cggcagatca atgcccatcg cggcggtgcg gaaatagccg
     1381 tagaaggaca caatgttaag ttgggccggg gtggcattcg cgaagtggag ttttttgtcc
     1441 agacccagca actcatctgg ggtggacgcc tgcccgagct acgtaccgca ccaacctgcg
     1501 agtcactgaa cggtctagcg gtggcggggc aaatttccca agaaaccgcc gacgaactga
     1561 tcatttccta ttggttcctg cgccgggtcg agcatcgatt gcaaatggta gatgaccagc
     1621 aaacgcatga tttacccagc gatgctgatg gtattgaaca gattgctata tttctcggct
     1681 atgaaagtgg tgatgcattt cgggaagaac tgttaagtca tttgaactgt gtggaggcgc
     1741 attatgctca attgtttgaa gatgcaccgc gtctcgacgg aaccgatgaa atcaaaggca
     1801 atttgatatt taccggcgct gacgatgacc cggaaactct gaataccatt aaatcaattg
     1861 gttttgctca accggaaatc atcgccgaga cggtgcgcac ctggcatcat ggccgctacc
     1921 gcgccaccag cagcacccgt gcccaacaga ttttaactga gctggttccg gtcatcctta
     1981 aggctttcag cgaaacacca gaaccagata tcgcctttag aaaattcgat gattttttag
     2041 ctgctttgcc cgcgggcatt caactgtttt cgatgtttca tgcccatccg acgttgctca
     2101 atctggtagc cga
//
LOCUS       DASCNL010000250         3709 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000557793, whole genome shotgun sequence.
ACCESSION   DASCNL010000250 DASCNL010000000
VERSION     DASCNL010000250.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3709)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3709)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3709
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000557793"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2509
                     /locus_tag="QF359_03330"
     CDS             <1..2509
                     /locus_tag="QF359_03330"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO85973.1"
                     /translation="ILVHKVDGVAVKIEGNPKSTVGKGRLCGKGVSGLMTHYDPNRVR
                     VPMRRTNPEKGIGIDPGWEEISWDEALDEIAGRLKKIRADDPRKLSIQRTTTVYTMGL
                     PWAAFAPGFGTTNVSEGGGGLHCGNSAHQVSGLLHASWGVLPDFQYCNYTLYFGASKG
                     HAAGHNSNSNMAQAADARERGMKMVVVDPMCNFAAAKANEWVPIRVGTDAALALAMCN
                     VLANELGTLDEPYLKAKTNGPYLIGPDGAYVRDVESNEPLVWDSKAGSAKPHNVADSE
                     DMALEGEFDVDGVICQPAFALLKEHLKKYSPEYAEEITTVPVENIRRISEEFAREARI
                     GSTIVIDGITLPYRPAAAIAFRGLQGHRNATFNFLAVLLLNQLVGAADVVGSCHGFNS
                     SFDGIPETGRMGYKPKAGPDGLMEVGTWMAYDPPYPRPEPKKPEEMGLQDLFVMGMTS
                     PFFNSEEGEELWEKFDMPYRPEMLINYGANIMMSIANKDLIAESLKKLDFIASFDLFM
                     NETSDFVDIILPDRGYLGCYNTRPNTPYIFSHPAGMGDWSWAIQQPVVEPEGEERIFA
                     DVLIDLADRADFLSDINTAFNAVFDLRGEYRLQSDRKYSYEEVCDADLKNNFGPKRGL
                     EFFKKEGVVTWPKTPEEVYWRPFTDARVPIYWEWMPELGKKIQAISGPAGLDVPMEYY
                     SALVEYLPCVSHKCDHDGFDFYTFYYRDTLHTNSFTMENAWLDEAAQLDPYSYNIAMN
                     TASGLNREIEDGDMIWLETERGRKVKGRVHLTQAIHPEGLGIAALCGHWAKGMPVAKG
                     KGIFYNELLELDWDYVNPVNLTLDLCSKVKVTRAEES"
     gene            2509..3117
                     /locus_tag="QF359_03335"
     CDS             2509..3117
                     /locus_tag="QF359_03335"
                     /inference="COORDINATES: protein motif:HMM:NF024644.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO85974.1"
                     /translation="MKWGMVIDLKRCVGCYGCQLSCKAEHGTPRGIFFARVLKQEEGQ
                     YPTVSQTFLPVLCNHCEDPPCVEACPTGASFIWEDDGTVDIDHDICVGCRTCMLACPY
                     SNRYFNDNEQAYYGDKGQTPFENARTTQHQEGVVMKCNFCRDRRQAGKEPACVANCPT
                     VARHFGDLDDPTSNVSRLIKERAGFVLHPDKGTKPNVYYLPA"
     gene            3136..>3709
                     /locus_tag="QF359_03340"
     CDS             3136..>3709
                     /locus_tag="QF359_03340"
                     /EC_number="1.8.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF015851.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0019645 - anaerobic electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DmsC/YnfH family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HJO85975.1"
                     /translation="MTSARYDRLINDLKSEYRPQREWAEGRGAFLIYGHFLVGVAAGG
                     WLLSRYYGSFDGLVLSYVLACSGGLAHLVNLARPERVLNMMQRYKTSWVSRGFWGLTF
                     FLIGGVLYLLSRNELGAPLGVGSLLSGIGDILAVIGSLTMMGYMGFVYTASKGIPFWN
                     STLHPVLYIAYAIRGGIAALVLMLALRGHEL"
BASE COUNT          857 a          916 c         1016 g          920 t
ORIGIN      
        1 cattctggtt cataaagtcg acggcgttgc cgtcaaaatc gagggtaacc ccaaaagcac
       61 ggtcggcaaa ggccgcttat gtggtaaggg ggtcagcggg ttgatgaccc actatgatcc
      121 caaccgggtg cgtgttccaa tgcgccggac aaatccggaa aaaggcatcg gcattgatcc
      181 gggttgggag gagatctcct gggacgaagc acttgatgaa atcgcaggcc ggttgaaaaa
      241 aatccgcgcc gatgatcccc gcaagctatc gatccaacgg acgacaacag tttatactat
      301 gggtttgccg tgggccgcct ttgcgccagg tttcggcacc accaatgtgt ccgaaggcgg
      361 tggcggtctc cattgcggca attccgccca ccaggtgtcg ggtttactac atgcttcctg
      421 gggcgtgctg ccggatttcc aatattgtaa ttacacgctt tactttggcg catccaaggg
      481 ccacgcggcg gggcacaatt caaattccaa catggcgcag gcagcggatg cccgcgagcg
      541 cggcatgaaa atggtcgtcg ttgatccgat gtgcaatttc gctgctgcca aggccaatga
      601 atgggtgccg atcagggtag gcacagatgc ggcgctggcg ctggccatgt gcaacgtgct
      661 ggccaatgag ctcggcaccc ttgatgagcc ttatctcaaa gccaagacca atggtcctta
      721 cctgattggc ccggacggtg cctatgtccg tgacgtcgag agcaatgaac ccttagtctg
      781 ggatagcaaa gccgggtccg ccaaaccgca taatgtagct gattccgaag acatggcttt
      841 ggaaggtgaa tttgacgtcg atggcgtcat ttgtcagcct gctttcgctc tgctcaaaga
      901 acatctgaaa aaatattcgc cggaatatgc tgaggaaatc accacagtac cagtcgaaaa
      961 catccgccgt atatccgaag aatttgcccg ggaagcgcgc attggcagca ccattgtcat
     1021 tgacggtata acgctgccct accgtcccgc cgccgccatt gcctttaggg gattgcaggg
     1081 tcatcgcaat gcaacgttta attttttagc tgtcttgttg ctgaaccaat tggtcggagc
     1141 ggccgatgtg gtcggctcct gccacggttt taattcttcg ttcgacggaa ttcccgagac
     1201 cgggcggatg ggttacaagc ccaaagccgg accggatggt ctaatggaag tgggcacctg
     1261 gatggcctac gatccccctt accccaggcc tgaacctaag aagcctgaag aaatggggtt
     1321 gcaggatttg tttgtcatgg gcatgacctc accgtttttt aactccgagg agggcgaaga
     1381 attatgggaa aaattcgata tgccttaccg gccggagatg ctgatcaatt acggcgccaa
     1441 tattatgatg agcatcgcca ataaagattt gattgcagaa tcactcaaga aactagattt
     1501 catcgcttcc ttcgatttgt ttatgaacga gacctcggac tttgttgata tcatcttgcc
     1561 ggaccggggc tatcttggct gctataacac gcgtcccaat acgccttaca tttttagcca
     1621 ccctgccggc atgggcgatt ggagctgggc gatccagcaa ccggtcgtcg agcctgaagg
     1681 cgaagaacgc atttttgccg acgtgctgat cgatttggct gaccgcgcag attttctttc
     1741 cgatattaat actgctttta atgcggtgtt cgatttacgc ggcgaatacc ggctgcaaag
     1801 cgaccgaaaa tattcttatg aggaagtttg cgacgccgat ctaaaaaata atttcggacc
     1861 taaacgtggt ctcgagtttt ttaagaaaga aggcgtggtc acctggccga aaacaccaga
     1921 ggaagtttat tggcgaccct ttaccgatgc ccgcgtaccg atttattggg aatggatgcc
     1981 ggagcttggc aaaaaaattc aggcgatctc gggcccggct ggactcgatg tgccgatgga
     2041 gtattactcg gccctggtcg aatacctgcc atgtgtgtcg cataaatgtg atcatgatgg
     2101 ttttgatttt tatactttct attaccggga caccttgcac accaacagtt tcactatgga
     2161 gaacgcctgg ctcgacgaag ccgcccagct tgatccttat tcttataata tcgccatgaa
     2221 tacggcatcg ggcctgaacc gcgagatcga agatggcgat atgatctggc tcgaaaccga
     2281 aagaggccgc aaggttaaag gacgagtcca cttgactcaa gcgatccacc ctgaaggtct
     2341 cggcattgcc gcactgtgcg gtcattgggc taagggcatg ccggtcgcca aaggtaaagg
     2401 tattttttac aacgagctgc ttgaactcga ttgggattac gtaaatccag tcaatcttac
     2461 gcttgattta tgctcgaagg tcaaagtgac ccgggcggag gaaagttaat gaagtgggga
     2521 atggtaattg atttaaaacg ttgcgtcggt tgttacggct gtcagctatc gtgtaaagcc
     2581 gaacatggca cgcctcgcgg tattttcttt gcccgcgtgc tgaaacaaga agaagggcaa
     2641 tatccgacgg tcagccagac tttcctgccg gtactttgta atcattgtga agatccaccc
     2701 tgtgttgaag cctgcccaac cggtgccagc ttcatttggg aagatgatgg cactgtcgat
     2761 atcgatcatg acatttgcgt cggttgccgt acctgcatgc tggcttgccc ctattccaac
     2821 cggtatttca acgacaatga gcaggcttat tacggcgata agggtcagac gccttttgaa
     2881 aatgcacgca ccacccaaca ccaggaaggc gtggtgatga aatgtaattt ctgccgtgac
     2941 cggcgccaag cgggcaaaga gccggcttgt gtcgccaact gcccaaccgt tgcccgtcat
     3001 ttcggcgatc tcgatgatcc gaccagcaat gtcagtcgcc tcatcaagga gcgtgctgga
     3061 tttgttttgc atccggataa aggcaccaaa cccaatgtct attatttacc ggcttaaaaa
     3121 gaaggatagt gagctgtgac cagtgcaaga tacgacaggt tgatcaatga tttaaaaagc
     3181 gaataccggc ctcagcgaga atgggcggaa ggccgtggtg catttctcat ctatggccat
     3241 ttcctggttg gcgttgccgc cggtgggtgg ttgctatcaa gatattacgg tagctttgac
     3301 ggcttagtct tgtcctacgt cctggcgtgt tccggcgggc tcgctcatct ggttaatctg
     3361 gcccggcccg aaagagttct caatatgatg caacgttata aaacctcttg ggtctccaga
     3421 ggtttctggg gactgacctt tttcttgatc ggtggcgtgc tttatttgct gtcgcgaaac
     3481 gaactgggcg caccgttggg ggtcggatca ctattgtcgg gaattggtga tattttggcg
     3541 gtgatcggat cgctgacgat gatgggctac atgggcttcg tctataccgc ctcgaaaggt
     3601 attccgtttt ggaactcaac cctgcatccg gtgctctaca ttgcctatgc catccgtggc
     3661 ggtatcgctg ctctggttct gatgttggca ctgcgcggcc atgagttgg
//
LOCUS       DASCNL010000251        16431 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000565485, whole genome shotgun sequence.
ACCESSION   DASCNL010000251 DASCNL010000000
VERSION     DASCNL010000251.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 16431)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16431)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16431
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000565485"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(266..1258)
                     /locus_tag="QF359_03345"
     CDS             complement(266..1258)
                     /locus_tag="QF359_03345"
                     /inference="COORDINATES: protein motif:HMM:NF024877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HJO85976.1"
                     /translation="MKPNAPPAEYAFAYKNKPTSGNKINGLGVAEKFRPVPPFHNSGR
                     GAGREEIPWAALDTFFIMSGPWTVFWENVRGLWERRNAAGPVTRDPIEITDPQAMADQ
                     VKAKAREIGIQIIGITLYDDDSQYRENAFPYKYAIMVGTVMRRDAMVTAPHTPAAKEV
                     MRGYRVGSEHANQLAAYIRTLGWQAEGYGIGEDLVQHPMAIQSGIGTLGKHGSLINRE
                     HGSNFRISSVLTDLPLMLDQPLDFGAEDFCVSCKKCVTECPPGAIFDTKQMVRGDKKW
                     YVDFDKCIYYFSDHMGCSICIEVCPWSEPGHGPRLSEKMLKRRAANASAGVAMR"
     gene            complement(1258..1488)
                     /locus_tag="QF359_03350"
     CDS             complement(1258..1488)
                     /locus_tag="QF359_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85977.1"
                     /translation="MNEQAERVATTSEQQFRIKVDSFWVRRLRDWFVFRYLVRIIWMW
                     MTVGRRIRNAHQEAKRSGTIFYIDDLMGGGDV"
     gene            complement(1518..1673)
                     /locus_tag="QF359_03355"
     CDS             complement(1518..1673)
                     /locus_tag="QF359_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO85978.1"
                     /translation="MSDQGYDIWKIDVTPVTPETATAAVRVDVPVIMVDGPIAPPKPV
                     SLPPTSG"
     gene            2152..3180
                     /locus_tag="QF359_03360"
     CDS             2152..3180
                     /locus_tag="QF359_03360"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HJO85979.1"
                     /translation="MSLKRTFLTVVVSLPFAGMLAATSTYAQKIYRADVGSPGGSSHS
                     MMVTYAKMAKRAGIEIQINAGKTLTVSTYQAGKGKIEFYTGVPFFYKAMKKKIAMYKK
                     KNDAPEVAKKIRYIFSYPAGLTHFLVYENSGIRSFKDFKGKKIFLGPPAGGATYEAKV
                     QIKVGSGYEAGKDYKGVILNWGEGIQAMKDKKIDVLVRPIQLGSALIEQFGLTNKFRL
                     ISLPERALKSNSGLEEFLSEPDYMLTTVHPNSYKGQMNTKPVVQLGYYLFIGTQSMVP
                     EKVVYKATKKFWENIKEVKATAKYMEDLNRKTAFAAVNGPLHIGAYKYYKEAGFDVPA
                     IAIPPEAK"
     gene            3255..5183
                     /locus_tag="QF359_03365"
     CDS             3255..5183
                     /locus_tag="QF359_03365"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HJO85980.1"
                     /translation="MHSFIHGFADFCRSLGGFRLAIASAVALGLAGVVIYSTGFGLFF
                     PIEQRGGIYLASILIVICKFGTDRLKTSGGGFSNIANVTVDILLLAAAVFSIYRFMIV
                     QTAMANDLYDIVPADILACFVGLIVIVELTRRVWGWTLFVVSLLSLIYILWGQDLPGV
                     LRHSGFSYEQLAENLWFNLNKGIFGSITNIVINVVLIFVLFGVMLESTGAGQTLLKYA
                     FRLTQKTRGGPAHAAIIASGLFGTMSGSPVANIVGTGTFTIPIIKKRGFSPEFSAGVE
                     ATASCGGQIMPPIMGAAALVMADLAGIPYLFLITAALIPALFYYLSLFLGVTVEARKQ
                     GIEPITDLEAYKITPQDRLNAIMFVAPILSVIIGLVMGFSPAMAGFFALVVLLLCSIV
                     NPEVRKNPARLLRGLISGGVNAAELMISVAAIEIVVGVMDTTGLGLKFAGMVENIGNQ
                     QLFLSLFVAMTGALILGMGMPTLPAYLIIVLIMGPAIKLLGLSTLVVHLFVFYYGVAS
                     SLTPPVAIAAYVAAPIAGANPIMTALMALRIGAAKFIIPFAFAYYPTLLLVENFDIIA
                     FFSILVRLSLTVYLVSSALSAFDRTKLNFTSILIRLVLAVLCLLTPIEYHGPATVFSV
                     MILLKSWQIFPFKTRLSS"
     gene            5606..6832
                     /gene="urtA"
                     /locus_tag="QF359_03370"
     CDS             5606..6832
                     /gene="urtA"
                     /locus_tag="QF359_03370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033219 - urea binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter substrate-binding protein"
                     /protein_id="HJO85981.1"
                     /translation="MFAGAVQAAESIKVGVLHSLSGTMAISETTLKDTMLMLVEEQNK
                     KGGLLGKKIEAVVVDPASNWPLFAEKAKELILKHKVDVVFGNWTSVSRKSVLPVFEEL
                     NSMLFYPVQYEGEESSRNVFYTGAAPNQQAIPAVEYLMSEDGGAAKRWVLLGTDYVYP
                     RTTNKILRAFLTAKGVKESDIMENYTPFGHSDWQTIVSQVKKFASAGKKTAVVSTING
                     DANVPFYKELGNQGIKAEDIPVVAFSVGEEELAGLDTKPLVGHLAAWNYFMSVETLEN
                     AAFIKKWHAFIKNKKRVTNDPMEAHYIGFNMWVQAVKQAGTTNIDAVRQAMYGQKVKN
                     LTGGIAIMNTNHHLSKPVLIGEIQEDGQFETVWKTNKVVRGDAWSDFIPESAKLTANW
                     TFPWVCGNCQKPKFIN"
     gene            6914..8530
                     /gene="urtB"
                     /locus_tag="QF359_03375"
     CDS             6914..8530
                     /gene="urtB"
                     /locus_tag="QF359_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014187864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HJO85982.1"
                     /translation="MAPFKKILVLLAIIFALNNADATAATLGETIASLAKANTKQKIQ
                     TVKVISASGHDRAAEVLQALVGSKLYFQKSDRKVVIIKKAGSTYLLIDPLTAKELGQS
                     PKSKLKKIRINNRIRRVIRGALGGLTLLSKNPGQRLKAAEAVFKSASAGSLPTLKKAL
                     ERETDEKIKAKMVMAVAATELKISKDQVERLAAVKVLTEFAVPEVRALLGSLATVEKD
                     AEVKEAVDKALSDIEASLVFWNGIGNIFQGISLGSVLLLAAVGLAITFGVMGVINMAH
                     GELVMIGAYTTFVVQEIFRAYFPEAFGFSIAVAIPAAFVVAGGFGIAIERGIIRYLYG
                     RPLETLLATWGLSLILQQFVRSIFGPTNREVGNPEWMSGAIEITGGLVLTYNRIWIIA
                     FSLLVLGLLILFLRKTAFGLQMRAVTQNRPMASSMGIRTGYVDALTFGLGSGIAGVAG
                     VALSQIDNVSPNLGQAYIIDSFMVVVFGGVGNLWGTLVGAFSLGIVNKFLEPFAGTVL
                     AKILVLVAIILFIQKRPRGLFSLKGRAVEN"
     gene            8532..9719
                     /gene="urtC"
                     /locus_tag="QF359_03380"
     CDS             8532..9719
                     /gene="urtC"
                     /locus_tag="QF359_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HJO85983.1"
                     /translation="MSQSPAFQRRSGFSFLLTDTGGKWLLGIILVAIIFVPVLNLYVP
                     KDSFFHVPTFMVSLLGKYLTFALLALSVDLIWGYCGILSLGHGAFFALGGYAMGMYMM
                     RQIGARGVYGNAELPDFMVFLNWKELPWYWYGFDSFSFAMLMVVLVPGILAFVFGWFA
                     FRSRVSGVYLSIITQALTYAMMLAFFRNDMGFGGNNGLTDFKDILGFNIHTDGMRVTL
                     FMLSALAVAFGYVLCRYIVSSKLGRVLVAIRDAESRTRFLGYRVEYYQLFVFTVSAML
                     AGIAGALYVPQVGIINPSEFLPANSIEIVIWVAIGGRGSLYGAVLGGVLVNYAKSYLT
                     GAFPEIWLYALGGLFIFSTIFLPKGIIGSVASFSVKRAGGVSLTGFFHRISNHMRQNL
                     KGA"
     gene            9721..10506
                     /gene="urtD"
                     /locus_tag="QF359_03385"
     CDS             9721..10506
                     /gene="urtD"
                     /locus_tag="QF359_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding protein UrtD"
                     /protein_id="HJO85984.1"
                     /translation="MRVTPEVTSISQTPKYHDTILYLDAVSVSFDGFKALNNLSFFVN
                     KGELRAIIGPNGAGKTTMMDVVTGKTRPDQGQILFDGITDLTRFDETRIANMGIGRKF
                     QKPTVFENQTVFDNLELALSGSRDVIKSLLFKLRGEQQDRIDEVLGIIALSDEYQTAA
                     GNLSHGQKQWLEIGMLLMQEPELLLVDEPAAGMTDAETEQTAILLKKIAGDHSVVVVE
                     HDMEFVKSLESRVTVLHEGSVLAEGSLDKVQNDEQVIDVYLGR"
     gene            10518..11213
                     /gene="urtE"
                     /locus_tag="QF359_03390"
     CDS             10518..11213
                     /gene="urtE"
                     /locus_tag="QF359_03390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HJO85985.1"
                     /translation="MLNVQDIDLYYGASQALKSVALDADKGKVTCVMGRNGVGKTSLL
                     NAIAGHQPIKNGRIIWEDQDITVMSPYDRAARGIAYVPQGREIFPLMTVQENLQTGFA
                     AIPRALRHVQDEIFDLFPVLKDMLSRRGGDLSGGQQQQLAIARALVTRPRLLILDEPT
                     EGIQPSIIKDIERVIRLLAGRGEMAILLVEQYFEFARDLADDYAVMDRGEVVMHGTGE
                     TMVEEDVRRYLTV"
     gene            11188..12063
                     /locus_tag="QF359_03395"
     CDS             11188..12063
                     /locus_tag="QF359_03395"
                     /inference="COORDINATES: protein motif:HMM:NF013899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HJO85986.1"
                     /translation="MYAAISPSKDETPTPKPIIVDGRARLSFVADADGMTRLDDLFQR
                     DPQRILFPNPPKDDITQAVIVTTSGGLVGGDQISVEIETGEHAQALVMAQAAEKIYRS
                     AGADSQINVRLEAAPSSWLEYLPQETILFDGARLRRSTAIDVAEGGRLLAGEMMVFGR
                     LGHGEQFRFGSAHDGWEVSQNGHLVWADALHLKDDIAAVTSKPACFNSAVAAATGVYI
                     GVDAEQHLTTARDIFAARDTTTLTGATFVNGVLVMRWLGRDAFALRNDFGAFWCAFRN
                     QVAELPAALPRLWNM"
     gene            12135..12437
                     /locus_tag="QF359_03400"
     CDS             12135..12437
                     /locus_tag="QF359_03400"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008121015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HJO85987.1"
                     /translation="MNLSPREKDKLLVAMAAEVARKRLSRGVKLNYPEAIALISDYVV
                     EGARDGRNVADLMSDGATVLKRDQVMGGIAEMIHDIQVEATFPDGTKLVTVHEPIR"
     gene            12451..12762
                     /locus_tag="QF359_03405"
     CDS             12451..12762
                     /locus_tag="QF359_03405"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0035550 - urease complex [Evidence IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HJO85988.1"
                     /translation="MIPGEIITQDGAITLNSGRDVLTLKITNTGDRPVQVGSHFHFYE
                     ANEALAFDREATKGFRLDIPAGTAVRFEPGQAREVDLVAYQGKREIYGFNAKIHGSLE
                     G"
     gene            12766..14475
                     /gene="ureC"
                     /locus_tag="QF359_03410"
     CDS             12766..14475
                     /gene="ureC"
                     /locus_tag="QF359_03410"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HJO85989.1"
                     /translation="MAYEIERSAYTAMFGPTTGDKVRLADTNLYIEVEDDKTTYGEEI
                     KFGGGKVIRDGMGQSQVTRETGAVDTVITNALIVDYTSIVKADVGLKDGRIIAVGKAG
                     NPDIQSDVDIIIGPGTEVIAGEGRILTAGGLDAHIHWISPQQVDDALYSGITTMLGGG
                     TGPAEGTNATTCTPGAWHIGRMMQAAEGLPMNLGFFGKGNASQPEELRAQVAAGACGL
                     KLHEDWGTTPSAIDTCLGVAEEMDVQVAIHTDTLNESGFVENTVAAFKDRTIHAFHTE
                     GAGGGHAPDIIKVCGEANVLPSSTNPTRPFTVNTVDEHLDMLMVCHHLDAKIPEDVAF
                     AESRIRRETIAAEDILHDLGAFSMIASDSQAMGRVGEVIIRTWQTADKMKKQRGALPE
                     EQGDNDNFRVKRYIAKYTINPALAHGIADHVGSIEVGKLADLVLWKPMFFGVKPDIVL
                     KSGTITAAAMGDPNASIPTPQPVHYRPMFGALGKSLIESSVTFVSEAAAQAGIADALG
                     LVKQMVPVSGTRSVKKRDMALNDYQPNMEVDPETYEVRADGELLICEPAEELPLAQRY
                     FLF"
     gene            14472..14945
                     /locus_tag="QF359_03415"
     CDS             14472..14945
                     /locus_tag="QF359_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HJO85990.1"
                     /translation="MIRRATTLIQADHWADDEVLSTVTLAYEDRHRRRIKMEDDDGSA
                     FLLDLAEAKQLEEGDALLLEEGGVIAVHAADEDVLDIRCETTAETARIAWHIGNRHTP
                     VQVLADGGLRIIYDHVLQHMVEGLGASTTHKSAPFSPEQGAYVRAKKSHGHGHDH"
     gene            14935..15627
                     /locus_tag="QF359_03420"
     CDS             14935..15627
                     /locus_tag="QF359_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreF"
                     /protein_id="HJO85991.1"
                     /translation="MITDSNLLDLMTWLSPSFPVGGYVYSHGIEYAVEEDWITGEQDL
                     TGWIEAALTQGAGRIDGALFIAAWQAVTAKDEERLKWAVERADVMRGTSEMALESAAQ
                     GQAFLDTVLQTRGFPALKKIAADIKADDRQVTYAIAVAIVAAVAQVPLQAALLAYFHA
                     FTANLISAGVRLVPLGQIAGQRTQRNLKPLIEQTAKTAIAGKFDELGTAAPMIDWASM
                     QHETQYTRLFRS"
     gene            15624..16229
                     /gene="ureG"
                     /locus_tag="QF359_03425"
     CDS             15624..16229
                     /gene="ureG"
                     /locus_tag="QF359_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HJO85992.1"
                     /translation="MSTNPLRVGIGGPVGTGKTALLDRLCKAMRDDFNIAAITNDIYT
                     REDAEFLTRSGALDPDRILGVETGGCPHTAIREDASMNLAAVSELNVKFPGLDVIFIE
                     SGGDNLAATFSPELADITIYVIDVSAGDKIPRKGGPGITRSDLLVINKTDLAPLVGAD
                     LGVMDRDARKMRGDKPFYFTNLKVNNGLSEIIDFVTETGGL"
BASE COUNT         4027 a         3965 c         4239 g         4200 t
ORIGIN      
        1 agctgctttc aaaactcagt ataagtgtaa aagccgccgc gaatgcttcg ttaaaatcag
       61 acatgtgtta gtgcttaccc aggtgcctag ctataatttc tatttaattt taagagtttg
      121 aggtcagtga ccattcgcca ctttattata aaaattgatt ttatggcaac ggtggtgacg
      181 tcactttcct tatctacaat gaattcatcc gacacgttca ttccccgtgt cgttggtttc
      241 tcggttaatt acagcttaaa caggttcacc gcattgccac gccagcagac gcattggcag
      301 cccggcgttt aagcattttc tccgacaatc tcggaccgtg acccggttcc gaccaggggc
      361 agacttcgat gcaaattgag cagcccatat ggtccgaaaa atagtagatg catttgtcga
      421 aatcgacata ccatttctta tcgccccgga ccatttgctt ggtatcaaag atggcgccgg
      481 gcgggcattc ggtgacgcat ttcttgcacg agacacaaaa atcttcggcc ccgaaatcca
      541 gcggctggtc tagcatcagg ggtagatcgg tcagcaccga agaaatccga aaattggacc
      601 catgctcgcg gttgatcagc gaaccgtgct tgcccagggt gccgatccct gactgaatgg
      661 ccatcggatg ctggactaaa tcctcgccaa ttccatagcc ttccgcctgc cagcctaggg
      721 ttcggatata ggccgccaat tgattggcat gttccgagcc gacccgatag ccgcgcatga
      781 cttctttggc agccggtgtg tggggtgcgg tcaccatcgc gtcgcggcgc atcacggtgc
      841 ccaccatgat ggcatattta tagggaaacg cattttcccg gtattggctg tcatcgtcat
      901 aaagcgtgat gccgataatt tgaataccga tctcgcgagc cttggccttg acctgatcag
      961 ccatcgcctg gggatcggtg atctcgatcg gatcccgggt aaccggaccg gcggcattcc
     1021 gccgttccca cagaccccgg acattttccc aaaacacggt ccagggaccg gacatgatga
     1081 aaaaggtatc gagggcggcc cagggaattt cctcacgccc ggcgccgcgc ccggaattat
     1141 ggaatggcgg caccggtcgg aatttttcgg ccacacccag gccattgatt ttgttgcctg
     1201 acgttggttt atttttatag gcgaaggcgt attcggcggg cggtgcattg ggtttcatca
     1261 gacgtctcct ccgcccatca gatcgtcgat ataaaaaatt gtgccgctgc gctttgcctc
     1321 ttggtgagcg tttcgaatcc ggcgcccgac ggtcatccac atccaaataa tccgtaccag
     1381 atagcggaac acaaaccaat cccgcagccg ccgtacccaa aagctatcga ccttgattcg
     1441 gaactgctgt tcgctggtgg tcgcgacccg ttcggcctgt tcgttcattc gtgcctcccc
     1501 tgtgttggtc tcaaagctta cccggatgtt ggtggcaagg aaaccggttt tggcggtgct
     1561 atagggccat ccaccataat taccggcacg tcaactctga cagccgccgt cgctgtttcc
     1621 ggggtgacgg gtgtgacgtc aattttccaa atgtcatagc cttgatccga cattttccag
     1681 ataacctttt aatagggttc aattgtaagc aatctccacc aaggtacgcc cgaaggttaa
     1741 agattagggt atccgcacgg tcagttttga gcggaagttg gttccctttc caatcaatcc
     1801 caattgagct cgctaatccc tttacatcgg ggcctcctcc aaagcggcca ctgttccaga
     1861 gatcgcagct gaaacgtcca gctttgcgca tatggtgacg aatgcatcgc gcttcaagca
     1921 tcacggccca gtgcccaggg ccccgggctg atcggtgaac gagtttcctc agatcggggt
     1981 ttaggctggg ttttactcaa atggttaggc ttcacggttg tgagtacaag ttattataat
     2041 ttttaaatga aagacttggt gtttccaaaa gtttataata tgctccgact aaatatcggg
     2101 taagcggaca aaaaaatact cgcttacaac ttttagcctt aggaggtagt tatgagctta
     2161 aaaaggacat ttctaacggt tgtagtgtct ctgccatttg cagggatgtt ggcagcaacg
     2221 tcgacgtatg cacaaaaaat atatagggct gatgttggct ctccgggtgg ttcttcacat
     2281 agcatgatgg taacttatgc caagatggct aagagagctg gtattgagat tcaaattaac
     2341 gccggcaaaa cccttacggt atcaacctac caagcgggaa aagggaaaat tgaattttat
     2401 acgggtgtgc catttttcta caaggcgatg aaaaagaaga ttgccatgta caaaaagaaa
     2461 aatgacgccc ccgaagttgc caagaagatc aggtatattt tctcttatcc cgctggcttg
     2521 actcacttct tagtttacga aaattcgggg atacgaagct tcaaggactt caagggcaag
     2581 aaaatattcc ttggtccgcc agctggagga gcaacctacg aagctaaagt ccagataaaa
     2641 gtcggatcag gttatgaagc cggaaaagat tacaaaggag taattttgaa ttggggcgag
     2701 ggaattcaag cgatgaaaga caaaaaaatt gatgtcttgg ttcgaccgat tcaactgggt
     2761 tcagcgctaa ttgaacaatt tggcctaacc aacaagttta gactaatttc acttcctgaa
     2821 agagccttaa aaagcaacag cggtcttgaa gaattcctta gtgagcccga ttacatgtta
     2881 accaccgttc atccaaactc atacaaaggc cagatgaata ccaagcctgt tgtgcaactt
     2941 ggctactatc tctttattgg aacccagtcc atggtacctg aaaaggtggt atacaaggcg
     3001 acaaagaagt tctgggaaaa cattaaagaa gtaaaggcta ctgcaaaata catggaagat
     3061 ctaaatcgta aaaccgcttt tgctgcggta aacggacctc tccatattgg tgcatacaag
     3121 tattacaaag aggctggttt tgacgtgcca gctatcgcta taccaccgga agcaaaataa
     3181 tacagttagg gaatacacct tcgtggaact cagttatacc ctgaaggcgt atcctccttt
     3241 tttcttatta acgtatgcat agctttatac atggcttcgc tgacttctgc cgcagtctag
     3301 gcggttttcg cctagcgata gcctctgctg tagctctcgg gttggccggt gttgtcattt
     3361 attcaaccgg ttttgggctg ttctttccga tcgaacaacg aggcggtatt tatttagcct
     3421 ccatattgat tgtaatatgc aagttcggga ctgatcgcct aaaaacttcc ggtgggggtt
     3481 tttcgaatat cgccaacgta actgttgata ttctgctgct ggcagcagcg gttttttcga
     3541 tctatagatt tatgattgtt caaacggcaa tggctaatga cctttatgac attgttcccg
     3601 ctgatatatt ggcctgtttt gttggtctca tcgtaatagt agaattaact cgcagggttt
     3661 ggggttggac actcttcgta gtgtctttat taagtttaat atatattcta tggggtcagg
     3721 acttacctgg tgttctgcgt cactcaggct tttcttatga acagttggct gaaaaccttt
     3781 ggttcaatct taacaaaggc atctttggtt cgatcaccaa tatcgtaatc aatgtcgtac
     3841 ttattttcgt ccttttcggt gttatgttgg aaagcacagg cgccggtcaa acgctcctta
     3901 aatacgcttt ccgtctgaca caaaaaactc ggggtggccc agcacatgct gccataatag
     3961 catccggact ttttggtaca atgtctggaa gccctgtcgc taacattgtt ggcacgggaa
     4021 cctttacgat cccaatcata aagaagagag ggttttcccc agaattttcg gcgggtgtcg
     4081 aagccacagc ttcatgcggc ggccagatta tgccaccaat catgggggct gctgccttgg
     4141 tgatggctga cttagctggg ataccatatc tatttctgat tacagccgca ttaataccgg
     4201 cacttttcta ttatttaagt ctttttctgg gagttacagt tgaagctcgc aaacaaggta
     4261 ttgaacccat aaccgaccta gaagcctata aaattacccc ccaggacagg ctgaatgcaa
     4321 tcatgtttgt tgccccaatt ctctctgtca ttataggact cgtaatgggt ttttctccgg
     4381 ctatggctgg attttttgca ttggttgtac tcctgctctg cagtattgtt aatcccgaag
     4441 ttcgaaaaaa tccggctcgt ttactgagag gattgatctc aggaggcgtg aatgctgcag
     4501 agcttatgat ctcagtagca gcaatcgaga tcgttgtagg cgtcatggat acgacaggtc
     4561 ttggactaaa atttgcgggt atggtagaga atattggaaa ccagcaatta tttctatctc
     4621 tcttcgttgc aatgaccggc gccttaatcc tagggatggg gatgcccacc cttccggctt
     4681 acttgatcat cgttttaata atgggaccag caattaagct actgggttta agtacgttgg
     4741 ttgttcacct attcgtattt tattatgggg tcgcttcttc attaacacca ccagttgcaa
     4801 tcgccgcgta tgttgcggca ccaatcgctg gtgctaaccc aatcatgaca gccctaatgg
     4861 ccctcagaat tggcgcggca aagtttatta tcccatttgc tttcgcatac tacccgacgc
     4921 tattgctggt agaaaatttc gacatcattg ctttcttttc catcttggtt agactctctt
     4981 taacagtcta cttagttagt tctgcactta gtgcttttga tcgaactaaa cttaatttta
     5041 catctatttt aatccgcctg gtattggcag tactgtgtct cctcacccca attgaatatc
     5101 acggtccggc aacagttttt tccgtgatga tccttctaaa gtcctggcaa atttttcctt
     5161 tcaaaactcg actatcatct tgaactctat atttcttgaa aattgagccg tagaattgtc
     5221 cgtcataaag tggttcagca tttaagttag agtttgcccg cgaccttgct gacgattacg
     5281 ctgttatgga tcgaggcgaa gttgtcatgc gcggaaaagt tccggtggcc aaatattaag
     5341 cataccgatt tgattaaaaa atagtcaata aattaataag cctattaaat aggcaattaa
     5401 atgaaacaaa tcgttgaaca gtatcaaatt ttcagtctat tactttatct aacttattgt
     5461 aatcattaaa tataataaat tcttcacaaa actggcacgg cccttgcgat acaaggtctg
     5521 atgcaacaac aatcttgaag tggagaaaac tatgaaaacc aaattcctta cattagctgg
     5581 tgctagtgtt atcgcacttt cgacaatgtt cgctggtgca gtacaggctg ccgagtcaat
     5641 taaagtcggt gtccttcatt ccctttccgg cacgatggcg atcagtgaaa ccacactgaa
     5701 agacactatg ctgatgctcg ttgaagagca aaataaaaaa ggcggtcttt tgggtaaaaa
     5761 aatcgaagcc gtcgtcgttg acccggcttc gaactggccg ctctttgcgg agaaagccaa
     5821 agagttgatc ctcaagcata aagtcgatgt cgttttcggt aactggacct cggtttcccg
     5881 taaatccgtg ctgccggttt ttgaagaatt gaacagcatg ctgttttacc cggtgcagta
     5941 cgaaggtgaa gaaagctcac gcaatgtttt ctatactggt gcggcaccaa accaacaggc
     6001 aattccagct gttgaatatc taatgagcga agacggtggt gcagccaaac gttgggttct
     6061 cttaggtacc gactatgtct atcctcggac gaccaataaa atcctgcgcg ctttcttgac
     6121 agccaaaggc gttaaagaat ccgacatcat ggaaaattac actccgttcg gtcattccga
     6181 ttggcaaacg attgtttccc aagtgaagaa attcgcttcg gccggcaaga aaaccgctgt
     6241 ggtttcgacc attaacggtg acgccaacgt gccgttctat aaagagcttg gcaaccaagg
     6301 tatcaaagcg gaagacattc ccgtcgtcgc tttctcggtt ggtgaagaag aacttgctgg
     6361 ccttgatacc aaacctttgg ttggtcactt ggccgcttgg aactatttca tgagcgttga
     6421 aacgctggaa aatgctgcct tcattaaaaa atggcacgcg ttcatcaaaa acaaaaagcg
     6481 cgtcaccaac gatcccatgg aagcacacta cattggcttc aacatgtggg tgcaggcagt
     6541 taaacaggcc ggcacgacca acatcgatgc ggttcgccaa gccatgtacg gccagaaagt
     6601 taaaaacctg accggtggta ttgctatcat gaacaccaac caccaccttt ccaaaccggt
     6661 tctaatcggt gaaatccagg aagatggtca attcgaaact gtttggaaaa ccaataaagt
     6721 tgttagaggt gacgcctgga gtgacttcat tccggaaagc gccaagttga cggctaattg
     6781 gaccttcccg tgggtttgcg gcaactgcca aaaaccaaaa ttcataaact aagcaactta
     6841 cccaatgtgg ggacagttcc ttaggggctg tccccgctct ctaaattaaa ttaatgatca
     6901 gaaagaatta ggcgtggcac cctttaaaaa aattttagtt ttgttggcga tcatctttgc
     6961 tttaaataat gcggacgcta ctgcggcaac tctcggcgaa accatcgcgt ctcttgccaa
     7021 agctaacacc aagcagaaaa ttcaaacggt taaagtcatt agcgcttcag gccatgaccg
     7081 agcggcagaa gtgttgcagg ctctggttgg cagtaaactc tattttcaaa aatcagacag
     7141 aaaagtcgtc atcattaaaa aagccggatc aacctatctg ctaattgatc ctctcaccgc
     7201 taaagagctg gggcagtcgc cgaaatcaaa actcaaaaaa attcgtatca acaaccgcat
     7261 ccgccgcgta atccgtggcg cgcttggcgg cttaacgctc ttaagcaaaa accctggaca
     7321 acgcctcaaa gcggccgagg cagtgtttaa gtcagcatcg gcaggttccc tgccgacgct
     7381 taagaaagca ctagaacggg aaactgatga aaaaattaaa gccaagatgg tgatggcggt
     7441 ggcggcgacc gagcttaaaa tctcaaaaga tcaggtggaa cggctcgcgg cggtaaaagt
     7501 tttgacggaa tttgccgtac ctgaagtccg cgccttgctc ggcagtctcg ctaccgtgga
     7561 gaaagacgct gaagtcaaag aggctgttga caaggcgctc agcgacatcg aagcgagcct
     7621 cgtcttttgg aacggcatcg gcaatatttt ccaaggtatc agtcttggtt cggtcctgct
     7681 gctcgcggcc gttggtctcg ccattacctt tggtgttatg ggggtcatca atatggccca
     7741 tggcgagtta gtgatgatcg gcgcctatac aacatttgtc gtccaggaaa tattccgcgc
     7801 ttatttcccg gaggcctttg gtttttccat cgctgttgcc atccctgccg cctttgtcgt
     7861 tgcaggcggg ttcggcatcg cgattgagcg cggcattatt cgctaccttt atggccgtcc
     7921 gcttgaaaca ttgctcgcaa cttggggatt gagtctgatc ctgcagcaat ttgtgcgttc
     7981 gattttcggc cctaccaatc gcgaggtcgg caatccggag tggatgtccg gcgcgatcga
     8041 aatcactggc ggcttggtgc tgacctataa ccgcatttgg atcatcgcat ttagtctctt
     8101 ggttctggga ctcttaatac tgtttctgcg caaaactgct tttggtttgc aaatgcgggc
     8161 ggtgacgcaa aaccggccga tggccagttc gatgggaatc agaactggct atgtcgatgc
     8221 actcaccttt ggattgggct ccggcattgc cggcgttgcc ggggtagcgt tgagccagat
     8281 cgacaatgtc agccccaatc tcggccaagc ctatatcatt gatagcttta tggtggttgt
     8341 ctttggcggc gtcggtaatc tctggggcac acttgtcggt gctttcagtc tcggtattgt
     8401 caataagttc ctggaacctt tcgcaggcac cgtactggcg aaaatcttgg tgctcgttgc
     8461 cattattctc ttcattcaaa aaaggccgcg tggactgttc tctctcaaag gccgggcagt
     8521 ggagaattaa gatgtcgcag tctcccgcct tccaaagacg ttccggcttt tcctttttac
     8581 tcaccgatac cggcggtaaa tggctcctcg gtattatctt agtggcgatt atattcgtgc
     8641 cggtattgaa tctttacgtt cccaaagaca gtttcttcca tgtgccgact ttcatggtga
     8701 gcctgcttgg taaatatctc acttttgcgc tgctggcgct cagcgttgat ttgatctggg
     8761 gttattgtgg catattaagc cttggccacg gcgcgttttt tgcgctcggc ggatatgcca
     8821 tgggcatgta tatgatgcgc cagatcggtg cacgcggtgt ctacggcaat gccgaactgc
     8881 cagattttat ggtcttcctg aactggaaag aattgccgtg gtactggtat ggcttcgata
     8941 gtttcagctt tgcaatgctg atggtcgtgc tggtgcctgg tatcctggct tttgtctttg
     9001 gctggtttgc cttccgctcg cgagtctccg gggtgtatct ctcgatcatc acccaggcgc
     9061 tgacctacgc catgatgctg gccttcttcc gcaatgatat gggctttggc ggtaataacg
     9121 gcctaaccga ttttaaagat atcctcgggt tcaatatcca tactgatggc atgcgggtga
     9181 cgctctttat gttgtcagct ttggcggtgg cgtttggtta tgtgttatgt cgatatattg
     9241 tatcttccaa actgggtcgc gtgctcgtcg ccattcgcga tgctgaaagc cggacgcgat
     9301 ttctgggtta ccgcgttgag tattatcaac tcttcgtttt taccgtctcc gccatgctag
     9361 ccggtatcgc cggggcgctt tacgtgccgc aggtcggcat tattaaccca agcgaatttc
     9421 tccctgccaa ctccatcgaa atcgtaattt gggtggcgat cggcgggcgc ggctcacttt
     9481 atggcgcggt gcttggcggt gtgctggtga attacgctaa gtcctatctc accggtgcgt
     9541 ttcctgagat ttggctctat gcccttggtg gtttgtttat tttctcaacc atctttctcc
     9601 ccaaaggtat catcggttcg gttgcatctt ttagcgtcaa acgtgcgggc ggcgtatcct
     9661 tgactggctt ttttcaccgc atctccaatc acatgcgcca gaatttgaag ggcgcataag
     9721 atgagagtta cccctgaagt gacatctatc tcccagacgc caaaatacca tgacacaatc
     9781 ctctatcttg atgctgtgtc ggtcagtttt gacggattta aagcgctcaa taatttaagc
     9841 tttttcgtaa ataaaggaga gttgcgggcg attatcggcc cgaacggcgc cggtaaaacc
     9901 accatgatgg atgtggtcac cggcaaaacc cggcccgatc aggggcaaat tttatttgat
     9961 ggcattactg atttgacgcg ttttgatgaa acccggatcg ccaatatggg gatcggccgc
    10021 aagtttcaaa aaccaacagt gtttgagaac cagacagtct tcgacaattt agaattggcc
    10081 ctaagcggca gccgggatgt gataaaatcc ttgttgttta aattacgtgg tgaacagcag
    10141 gatcgcatcg atgaagtgct gggtatcatt gcgttgagcg acgaatacca aaccgctgcc
    10201 ggcaacttgt cccacggtca aaagcaatgg cttgagatcg gcatgttgct gatgcaggag
    10261 ccggaattat tgttggtcga tgaaccagcc gccgggatga ccgatgctga aaccgaacaa
    10321 accgcaatcc tgctcaagaa aatcgccggc gatcattcgg ttgtcgtcgt cgagcacgat
    10381 atggaattcg taaagtctct cgaaagtcgg gtgaccgtgc tccatgaagg ctcggttctg
    10441 gctgaggggt ccttggataa agtgcaaaac gatgagcaag tcatcgatgt gtacttaggc
    10501 agataaggcg tgatggtatg ttaaatgttc aagatatcga tctctattat ggcgccagtc
    10561 aggccctgaa atctgtcgcg ctcgatgcgg acaagggcaa ggttacttgc gtgatggggc
    10621 ggaacggtgt cggcaaaacc agcttgctta acgcgattgc cggacatcag ccgatcaaaa
    10681 atggccggat tatatgggaa gatcaagata tcacggtgat gtcgccgtat gaccgggcgg
    10741 cgcgcggtat cgcctacgtg ccgcagggcc gcgaaatttt tccgctaatg accgtgcagg
    10801 aaaatctgca gactgggttt gcggcaatcc cacgggcgct acgccacgtt caggatgaaa
    10861 tctttgatct gtttccggtc ttgaaagaca tgttgagccg gcgcggtggt gatctctccg
    10921 gtgggcagca acagcaattg gcaattgccc gtgccctggt aacgcgccca cgcttgttga
    10981 ttttggatga acccaccgaa ggcattcaac cttctatcat taaggatatc gaacgggtca
    11041 tccgcttact ggcgggtcgc ggcgaaatgg caattttatt ggtcgaacag tatttcgagt
    11101 ttgcccgcga ccttgctgac gattacgctg ttatggatcg aggcgaagtt gtcatgcacg
    11161 gcactggcga gaccatggta gaggaagatg tacgccgcta tctcaccgtc taaggacgaa
    11221 acaccaacac ctaagccgat aattgttgac ggcagggcac gcttaagttt tgtcgcggat
    11281 gccgatggca tgacgcggct ggacgatttg tttcagcgag acccgcagcg tattttattt
    11341 ccgaacccgc caaaagacga catcacgcag gcggtgattg tgacaacatc gggtggcctg
    11401 gttggtggtg atcaaatatc tgttgagatt gagaccggag aacacgcgca agccctggtg
    11461 atggcacagg cagcagaaaa aatttatcgc tctgcgggtg cggactctca gattaacgtg
    11521 cgcctcgaag cagcgcccag cagctggctc gaatatctac cacaggaaac tattttgttt
    11581 gatggcgcgc gcttgcggcg ctcgacggct attgatgtcg cggaaggcgg caggttgctc
    11641 gccggtgaaa tgatggtgtt tggccggctg ggtcatggtg aacagtttcg tttcggttcg
    11701 gctcatgatg gttgggaagt ttcccagaat ggtcatctgg tttgggcgga tgccctacat
    11761 ctcaaagacg acatcgctgc ggtaactagc aaaccagcct gttttaacag tgccgtggcc
    11821 gcggcgacgg gagtttatat cggcgtggat gccgaacagc acctcacgac agcccgggac
    11881 atttttgcgg cccgagacac gaccacttta acaggcgcaa ccttcgtcaa cggggttttg
    11941 gtcatgcgct ggctggggcg ggatgctttt gcgctgcgca acgacttcgg cgccttttgg
    12001 tgtgccttta gaaaccaggt ggcggaactg ccggcagccc tacccagact atggaatatg
    12061 taaaaaattt aattgcccta gattaaaata attaaattta acccgagtta gattattgaa
    12121 aagggaggaa agagatgaat ctttcaccac gagaaaaaga caagctcctg gttgcaatgg
    12181 cggcggaggt cgcccgtaag cgcttatcgc gcggagtcaa actcaattac ccggaagcaa
    12241 tagccctgat cagtgattac gtcgttgaag gcgcgcgcga cggccgcaat gttgccgatc
    12301 taatgtcgga tggcgcgact gttctcaagc gcgatcaggt gatgggtggc atcgccgaaa
    12361 tgatccacga tattcaggtc gaagcgacgt ttccagacgg caccaaactt gtcactgtcc
    12421 acgaaccgat acgctgagag agagttttaa atgatacccg gagaaattat cacccaagac
    12481 ggcgcgatca ccctcaactc aggccgcgac gtgctcaccc ttaaaattac caataccggc
    12541 gaccgtccgg tgcaggtcgg ctcacacttt catttttatg aagccaatga ggccctcgca
    12601 tttgaccgcg aagccaccaa aggttttcgg ctcgacattc cggcgggtac ggcggttagg
    12661 tttgagccgg gtcaggcccg tgaggtcgat ctcgtcgcct accaaggcaa gcgtgaaatc
    12721 tatggattca acgcgaaaat acatggaagc ttggaaggct agggcatggc atatgaaata
    12781 gaacgctcgg cctatacagc catgtttgga ccgacgaccg gcgataaagt gcgactggcc
    12841 gacaccaatc tttatattga agtcgaggat gacaaaacga cttacggcga agaaataaaa
    12901 ttcggcggcg gtaaggtaat ccgggatggc atggggcagt ctcaagtcac ccgtgaaacg
    12961 ggcgcggttg acacggtcat tactaacgcg ctgatcgtcg attataccag cattgttaaa
    13021 gccgacgtcg gcctcaaaga cggtcggatt atagccgtcg gcaaggccgg taatccggac
    13081 attcaatccg atgttgatat tatcattggt cctggcaccg aagtgattgc cggtgaaggg
    13141 cgcatcctaa cggctggtgg gcttgatgcg cacatccatt ggattagtcc gcagcaagtc
    13201 gatgatgcgc tttactccgg tatcacaacc atgctcggtg gcggtacggg gccagccgaa
    13261 ggcaccaatg caacgacctg tacgccgggg gcctggcaca ttggccggat gatgcaagcg
    13321 gcggaaggtc tgccgatgaa cttgggcttt tttggcaaag gcaatgcatc gcaaccggaa
    13381 gaattgcgcg cccaagtcgc tgcaggtgct tgtgggctca aacttcatga agattggggt
    13441 acgacaccct cggccattga tacctgtttg ggcgtcgccg aagaaatgga tgttcaggtg
    13501 gcgatccaca ccgatacgct gaacgaaagt ggttttgttg aaaacacggt ggcggctttt
    13561 aaagaccgga caatccatgc cttccacacc gaaggcgcgg gcggtggtca tgcaccggac
    13621 atcattaaag tttgtggtga agccaatgtg ttgccatcgt caaccaatcc gacccggccc
    13681 tttaccgtca atacggtgga tgagcatttg gacatgttga tggtctgtca tcatctagat
    13741 gccaaaatcc cggaagacgt tgcctttgcc gaaagccgta ttcgccggga aaccattgca
    13801 gcggaagata ttctccatga tctcggcgcg ttttcgatga tcgcatcaga tagtcaggcg
    13861 atgggccgcg ttggcgaagt gatcatccgg acctggcaga cggcggacaa aatgaaaaag
    13921 caacgaggcg ctctgccgga agagcagggc gataatgata acttccgggt gaagcgttac
    13981 attgcgaaat acactattaa cccggcgctc gctcatggta tcgctgatca tgtcggctcc
    14041 attgaagtcg gtaagctcgc tgatctcgtc ctgtggaagc cgatgttctt tggcgtgaag
    14101 ccggacatag tcctgaaatc cggtacaatt accgccgctg ccatgggaga ccccaacgcc
    14161 tcgatcccaa caccacaacc ggtgcattac cggccgatgt tcggcgcgct aggtaaatcg
    14221 ttgattgaaa gttcggtgac gttcgtgtct gaagcggctg cccaagctgg catcgctgac
    14281 gcgctgggac ttgtcaaaca gatggtgccg gtctccggca cgcgaagtgt taagaaaaga
    14341 gatatggcgc tcaacgatta tcagccaaac atggaagttg atccggaaac ctatgaagtt
    14401 cgcgccgatg gtgagttact catctgtgag cccgctgaag agcttccctt agcacagagg
    14461 tattttttgt tttgataaga cgcgcaacga ctttaattca agcagatcac tgggccgatg
    14521 acgaagtgct ctcgaccgta acactcgcct atgaagatcg gcaccgccgc cgcattaaga
    14581 tggaagatga cgacggcagt gcttttttgc tcgatctcgc cgaagctaaa cagttggaag
    14641 aaggcgatgc gctactgttg gaagagggtg gggtgattgc ggtgcacgca gccgatgaag
    14701 atgtgctcga tattcgttgt gagaccacag ccgaaaccgc gcgcatagcc tggcatatag
    14761 gcaatcgtca cacgccagtg caggtgttgg cagatggcgg cttgcggatc atctatgatc
    14821 atgtattgca gcacatggtc gaaggcctgg gcgcgagcac cacgcacaaa tccgctccgt
    14881 tctcaccgga gcagggtgcc tatgtgagag ccaaaaaatc acatggacat ggccatgatc
    14941 actgattcga atcttcttga tttgatgacc tggctgtcgc cgagctttcc agtcggcggg
    15001 tatgtttatt cgcacggtat tgaatatgcg gtggaagagg attggatcac gggcgagcaa
    15061 gatttaactg ggtggattga ggccgcgctc acccaaggag ccggacggat cgacggcgca
    15121 ctttttattg ccgcgtggca ggcggtgaca gccaaggatg aagagcggtt aaaatgggcg
    15181 gtggaacgcg ctgatgttat gcgcggcacg tcagaaatgg cgctcgaaag tgcagcgcag
    15241 ggccaggcct ttctagatac ggtattacag acgcgtggct ttcccgcgct caagaaaatc
    15301 gcggcggata tcaaggctga tgaccggcag gtaacttacg cgattgcagt tgccattgtt
    15361 gctgcggtag cgcaggttcc gctgcaggcc gccttgctcg cctactttca tgccttcacc
    15421 gcgaacttaa tatcggcggg agtgcgcttg gtgccacttg gtcaaattgc cgggcaacgt
    15481 acgcagagga acttaaagcc acttatcgaa caaactgcca aaacggcaat tgctggaaag
    15541 tttgacgaac tcggcactgc cgcaccaatg atcgattggg catccatgca acacgaaaca
    15601 caatatacga gactttttag atcatgagca caaatccctt aagagtgggt atcggcggcc
    15661 cggtcggcac cggcaagaca gccttattgg accggctctg caaggcgatg cgggatgatt
    15721 tcaatatcgc cgctatcacc aacgatatct atacccgcga agatgccgag tttctgaccc
    15781 gctccggtgc actagatcca gaccgcatct taggcgttga gaccggcggc tgtccccata
    15841 cggcgatccg cgaagacgcc tcaatgaatt tagcagcagt aagcgaactc aacgttaagt
    15901 tccccggcct cgatgtgatt ttcatcgaaa gcggcggtga taatctggcg gcaacttttt
    15961 cacccgaact cgccgacatc acgatttatg ttattgatgt ttcagcgggt gataaaattc
    16021 cccgcaaagg cggacccggc atcacacgct ccgatctgct ggtgattaac aagaccgacc
    16081 tcgcgccgct cgttggggca gatcttggcg tgatggaccg ggatgccaga aaaatgcgcg
    16141 gcgacaagcc attctacttt accaatttaa aagtgaataa cgggttatcg gagataatcg
    16201 attttgttac ggagaccgga gggctttaaa cgcagattgg tttacctttt agtcaatgat
    16261 tttgaattgc agcgattatt tctcatatag taccaatgtc cgctaatggg atggaccgac
    16321 cgtgttctac actctagctc caatactgga gcaatgaaca cggaaaggaa tatgatcatg
    16381 ataaagcaga catccccagc ggcgatttca acgatcggca tcgacatcgg c
//
LOCUS       DASCNL010000252         3646 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000569313, whole genome shotgun sequence.
ACCESSION   DASCNL010000252 DASCNL010000000
VERSION     DASCNL010000252.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3646)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3646)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000569313"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="QF359_03430"
     CDS             complement(<1..244)
                     /locus_tag="QF359_03430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HJO85993.1"
                     /translation="MSFGVVFVVLNETGAALARRLISVVPDAEVHGLKSRVTEADIPF
                     EDTLNHLRRLFSAGRPFVAIMSAGIVVRALGPTVEDK"
     gene            complement(241..954)
                     /gene="cobI"
                     /locus_tag="QF359_03435"
     CDS             complement(241..954)
                     /gene="cobI"
                     /locus_tag="QF359_03435"
                     /EC_number="2.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030788 - precorrin-2
                     C20-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-2 C(20)-methyltransferase"
                     /protein_id="HJO85994.1"
                     /translation="MNENVKIWGLGIGPGDPELITLKALGILQAADVVAYPAPANGDS
                     LVRAIATPHMSGNQEEIIISTPMVTERYPAQNVYDKGASEISAAVESGKTVAVLCEGD
                     PFFYGSFMYLFVRLSESYPVQVIPGVTSLAACSAELALPLAARNDVVSVIPGTIDAAA
                     MEQQLMAANTAAIIKVGRHLGKIKNVLKKIGATGEAYYIERATMESQRIVPLCDLDDE
                     SAPYFSMIIVRRSGEILNL"
     gene            complement(951..2162)
                     /gene="cbiE"
                     /locus_tag="QF359_03440"
     CDS             complement(951..2162)
                     /gene="cbiE"
                     /locus_tag="QF359_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046025 - precorrin-6Y
                     C5,15-methyltransferase (decarboxylating) activity
                     [Evidence IEA];
                     GO_process: GO:0046140 - corrin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6y C5,15-methyltransferase
                     (decarboxylating) subunit CbiE"
                     /protein_id="HJO85995.1"
                     /translation="MSAWLTIVGIGEDGLAGLGSNARDAIDQADVLFGGERHLELVSK
                     EGNVWKSPLEDSLAELDEYKGQKVTVIATGDPMWFGIGVTLGRRYGADEIKVIPSPSV
                     FSYVAARMAWPLSAVDCLTVHGRDVERVRAFLSPGARLIVLTNDGETPGQITALLSQA
                     GFGKSPVSALAHIGGDQESRFEGLASDWSHGRVPDLNTVAIECVADEDAVVYPRSPGL
                     PDDAFQHDGQLTKREVRSVTLSALAPMPGQMLWDIGAGCGSIAIEWLRGARNTKAFAI
                     EKNMDRLGMINTNALALGVPELKVVFGEALNEITGLPAPDAVFIGGGLTSSGLLSYCW
                     QNLKPGGRLVANAVTFEGERRLIEAAELYANDQTKYELVKIDISRAHEMGRFTGWQPL
                     KPVTQLRLLKS"
     gene            complement(2159..2788)
                     /locus_tag="QF359_03445"
     CDS             complement(2159..2788)
                     /locus_tag="QF359_03445"
                     /EC_number="5.4.99.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HJO85996.1"
                     /translation="MSYLRDPAEIYRESFAAIAREVDLSNFPESLHRIVLRLVHAIAM
                     PEIVEELAWDGDVAGASSAALAEGAPVIVDTNMVVAGIKQDRLPQGVEVLCSLRDDAV
                     PELAHSLATTRSAAAVELWRPHLEGAIIAIGNAPTVLFHLIDMLEDTDCPRPAVIFAF
                     PVGFIGASESKAYLIEKNLGIPFITLQGRKGGSALAAAAVNAVLLEGEA"
     gene            complement(2812..>3646)
                     /locus_tag="QF359_03450"
     CDS             complement(2812..>3646)
                     /locus_tag="QF359_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014746292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CbiX/SirB N-terminal domain-containing protein"
                     /protein_id="HJO85997.1"
                     /translation="QGVDHILAVPGMLFSAGHVKNDIAAVLKQYESEHMDIGLKIEYA
                     RALDVDAKMLYAAEGRIAEAEAAAETNVSREDTLLMVVGRGTSDPDANSNINKICRML
                     WEGMGYGWGEVCYSGVTFPLVAPGLEHAAKLGYKRIIVFPYFLFTGVLVGRIYSIADE
                     IAAKFLDIEFVKAGYLNDHDSVIDTFEERVRGIMSGDNNMNCLMCKYREQIVGFEDHH
                     GLPQESHHHHVEGIGTGDAEPYSHDHSHDDGHSHDHGHAPHPHADHPHGPGKRNPAAA
                     E"
BASE COUNT          902 a         1066 c          889 g          789 t
ORIGIN      
        1 acttgtcctc cacggtgggt ccaagggcgc gaacaacaat gccagctgac atgatcgcga
       61 caaagggccg ccctgctgag aacaatctcc gtaaatgatt gagcgtatcc tcaaacggaa
      121 tatcggcttc tgtgacccgg gatttcagcc catggacttc ggcatcgggc accacggata
      181 tcaagcgccg agccaacgcc gcgccagttt cgtttaagac aacaaagaca acaccaaaac
      241 tcacaggttc aaaatctccc cgctgcggcg gacgataatc atcgagaaat aaggggcact
      301 ttcatcatca agatcacaaa gcggcacgat ccgctgactt tccatggtgg cgcgctcgat
      361 ataataggcc tcaccggtcg caccgatttt tttcaaaaca tttttaattt tgcctaaatg
      421 acgaccaact ttgatgatcg cggcggtatt ggctgccatt aattgttgct ccatcgccgc
      481 tgcatcaatc gtgcccggga taaccgagac cacatcattg cgcgccgcta agggaagtgc
      541 taactccgcc gaacatgccg ccaatgacgt cacgccaggg atgacttgta ccgggtagct
      601 ctctgacaaa cgcacaaata aatacatgaa agaaccatag aaaaatgggt ccccttcgca
      661 gagcacggcg acagttttgc cggactcaac ggcggcgctg atctcacttg cacctttatc
      721 ataaacattc tgcgccgggt aacgctcagt taccatcggc gttgatatga taatttcttc
      781 ctggtttccg ctcatatgcg gggttgcaat ggcgcgcacc agactatcgc catttgcggg
      841 cgccgggtaa gccaccacat cggcggcttg taatatcccg agagctttta gagtaataag
      901 ttcagggtcg cccggaccaa tgccaagccc ccaaatttta acgttttcat tcatgatttc
      961 agtagtcgta gttgggttac aggtttgagc ggctgccagc cggtaaaacg gcccatttca
     1021 tgggcgcgtg atatatcgat tttgactagc tcgtattttg tttggtcatt ggcataaagt
     1081 tccgcagctt ctatcaaacg gcgttcacct tcaaaagtca ccgcattggc aaccaagcgg
     1141 ccaccgggtt tgaggttctg ccagcaatat gagagcaagc cactcgaggt caagccgccg
     1201 ccgataaaga ccgcatccgg tgccggcagg ccagtaatct cgttgagcgc ctcaccaaaa
     1261 acgactttca gttccggcac gccgagcgcc agggcgttgg tgttgatcat accgagacga
     1321 tccatgtttt tctcaatggc gaaggctttg gtattgcggg cacctctcag ccattcgatg
     1381 gcgatcgaac cgcagccggc accaatatcc catagcatct gacctggcat gggtgccaac
     1441 gcagatagtg taactgacct cacttcacgc ttggtgagct gaccgtcgtg ctgaaaggcg
     1501 tcgtcgggca ggccggggga acgcggataa acaacagcat cttcatcggc gacacattca
     1561 atggcaacgg tattgagatc aggcacccgg ccatgactcc aatccgatgc cagaccctca
     1621 aagcgggatt cttggtcgcc gccgatatgc gctaaagcgc taaccggact tttaccaaaa
     1681 ccagcttggc taagtagcgc cgtgatttga cccggtgttt caccatcatt tgtcagtacg
     1741 atcaaacgcg ctcccgggct caggaaagcc cgaactcgct ccacatcacg gccatgaacc
     1801 gtgaggcaat caaccgcgct tagcggccaa gccatgcggg cagcgacata ggaaaaaacc
     1861 gagggtgacg gaataacttt aatctcatcc gcaccgtacc gcctgccaag cgtcacccca
     1921 atgccaaacc acatcggatc acccgtcgca atcaccgtga ctttttgacc cttatattca
     1981 tcgagttcag ccaaactatc ttcgagcggt gacttccaga cgtttccttc tttactcacc
     2041 aattccaagt gccgctcgcc accaaacaag acatctgctt gatcaatggc atcccgcgcg
     2101 tttgaaccca accccgccag gccgtcctcg ccaatgccga cgatggtcag ccaggcgctc
     2161 atgcctcacc ttccagcaga accgcattca ccgcagccgc ggctaaggcc gagccgcctt
     2221 tccggccttg caatgtaata aacggaatac ccagattttt ctcaattaaa taagctttgg
     2281 attcagacgc accgatgaac cccaccggaa aggcaaaaat caccgccgga cgcggacagt
     2341 cggtatcttc cagcatatca atcaaatgaa acagcaccgt cggcgcatta ccgatggcga
     2401 taatggcccc ctccagatgg ggccgccaca gttcaaccgc cgccgccgaa cgtgttgtcg
     2461 ccagagaatg tgccagttcc ggcactgcat cgtcacgcaa tgagcacaaa acctctacac
     2521 cttgcggcaa acgatcctgc ttaattcccg ccaccaccat attcgtgtcg acaataaccg
     2581 gtgcaccctc ggcaagagca gcggatgacg ccccggcgac atcaccgtcc caggcaagtt
     2641 cttcgacgat ttccggcatg gctatcgcat gaaccagtcg cagcacgatc ctatgcaggc
     2701 tttcgggaaa attggacaaa tccacttcgc gggcgattgc cgcaaatgat tcccggtaaa
     2761 tttctgctgg atcgcgtaaa tagctcatcg ccaaagctca gccttgctaa attactcggc
     2821 agcagcagga ttgcgcttgc cgggtccgtg cgggtgatca gcatgtggat gaggcgcgtg
     2881 gccatggtcg tgagaatgcc catcatcatg cgaatggtcg tgcgaataag gttcggcgtc
     2941 accagtgccg atcccttcaa catggtggtg atggctttcc tgtggcaaac cgtggtggtc
     3001 ttcgaaacca acaatctgtt cccggtattt acacatcagg caattcatat tgttgtcacc
     3061 gctcatgatg ccgcgtacgc gttcttcgaa ggtatcgatg acactatcgt ggtcgttgag
     3121 gtagcccgct ttaacaaact caatatccaa aaatttcgct gcgatttcat cagcaatcga
     3181 ataaatgcga ccaaccaaaa cgccggtgaa cagaaaatac gggaaaacga tgatgcgttt
     3241 atagccgagc ttggcagcgt gttcaaggcc gggtgcgacc agcgggaaag tcacaccgga
     3301 atagcaaacc tcgccccagc catagcccat gccttcccac agcatacggc agattttgtt
     3361 gatgttgctg ttggcatcgg ggtcggaagt gccccggcca acaaccatca acaacgtatc
     3421 ttcgcgggaa acattggttt cggctgcggc ttcagcctcg gcgatacgtc cctcggcggc
     3481 atagagcatt ttggcatcga catccagcgc ccgcgcatac tcgatcttaa ggccaatatc
     3541 catatgctca gattcatatt gcttcaagac agcagcaata tcgtttttga cgtgacccgc
     3601 cgaaaacaac atgccgggca ccgccaggat atgatcaacg ccttgt
//
LOCUS       DASCNL010000253         1012 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000569469, whole genome shotgun sequence.
ACCESSION   DASCNL010000253 DASCNL010000000
VERSION     DASCNL010000253.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000569469"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(173..>1012)
                     /locus_tag="QF359_03455"
     CDS             complement(173..>1012)
                     /locus_tag="QF359_03455"
                     /inference="COORDINATES: protein motif:HMM:NF012472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HJO85998.1"
                     /translation="LGITFLDTSNSYGSGTNEELFARLAAERCDDIVLSTKFGFFEGN
                     VCGTPEHVIESCDASLKRVGVEVIDLYYQHRVDPEVPIEETIGAMKNLITAGKVRYLG
                     MSEAAPETIRRAHAVHPISALQTEYSLWSRFAEAEILPTCRELGIAYVGYSPMGRGFL
                     SGAVTDPSKLVENDRRRDMPRLTADNLEHNLQLVQAVKDVAESKSVSMGQIVLAWIFA
                     SPFDIVPIPGTRDTKHLEDNIDALRIELSAEEKALLDETFNVENVKGQRLPERVFSTV
                     DNG"
BASE COUNT          253 a          257 c          249 g          253 t
ORIGIN      
        1 tttttggcac agttttttca cattgagaaa acaccataaa ttagcccaaa atatgacaat
       61 tctgacgaca ttcataccca tcgttttagc gcgcaacatt gactaaagtc aaattgtccg
      121 aagattgggc aagtgcgaat attagaaaat ctaaggcgtt acgttaacat cgttacccat
      181 tatctaccgt cgaaaatacg cgttccggca ggcgctgacc tttgacattc tcgacgttga
      241 aggtttcatc cagcaaagct ttctcctccg ctgacaattc aatacgcaaa gcgtcgatat
      301 tgtcttccag atgtttggtg tcgcgggtgc caggtattgg gacaatgtca aagggactgg
      361 cgaatatcca ggccagcacg atctgaccca tactaacgct tttactctcc gcgacgtctt
      421 ttactgcttg aacgagttga agattatgct cgagattgtc tgcggtcagt cgaggcatgt
      481 cgcggcggcg gtcattctca accaacttag agggatcggt gacggcaccg cttaaaaaac
      541 cgcgccccat tggcgagtat ccgacatatg caatgccgag ttcccggcaa gtgggcagaa
      601 tttccgcttc ggcgaagcgg ctccataaag agtactcggt ttgcaaagcc gaaatcgggt
      661 gaactgcgtg agcccggcgg attgtctcgg gcgcggcttc tgacatgcca agatatcgca
      721 ccttgccagc ggtaatgagg tttttcatcg cgccgatggt ttcttcgatt ggcacctcgg
      781 gatcgacccg gtgctggtag tagagatcaa tgacttcgac acccactcgc ttcaggctgg
      841 cgtcacacga ttcaatgaca tgttccggcg tgccgcagac attgccttca aaaaaaccaa
      901 attttgtcga tagcacgata tcatcgcagc gctcggctgc cagccgggca aataactctt
      961 cattggtgcc gctgccatag gaatttgagg tatccaaaaa agttatgccg ag
//
LOCUS       DASCNL010000254         1498 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000570329, whole genome shotgun sequence.
ACCESSION   DASCNL010000254 DASCNL010000000
VERSION     DASCNL010000254.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1498)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1498)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000570329"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="QF359_03460"
     CDS             complement(<1..280)
                     /locus_tag="QF359_03460"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO85999.1"
                     /translation="MANLVLFAMMVLTFVDVWARYGFNAPIPGGFEITEYLLVILIYA
                     ALPLVTARDEHVTVDVLDSLIPEAITRIQRHFMNLLAGLVLCFLTWRLW"
     gene            complement(356..1393)
                     /locus_tag="QF359_03465"
     CDS             complement(356..1393)
                     /locus_tag="QF359_03465"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO86000.1"
                     /translation="MYSKYIKSHLVAISVVTLGISAPTDSSSAKELTMSVWVPRTHAI
                     NTKMLTPWAAQVKEATSGRVSIRTLPKKVAGSKQHFNAIRDGLADVTFIVHGYTPGRF
                     VLTKGVELPFLADDGVSLSVAYWRMHNRMLAAKDEHKGVKLLSLFTQGPGAIFSATKP
                     IDTLASLKGMKIRVGGAARDVTKAIGAVPVSKPVSQLYELMSKGVTDGVIVPKETVVS
                     FKIDKVIKWGVIVPGGVYRAGFALIMNNGKFDGLSATDRQAVSKVSGEAFARLSGLAW
                     DAADSYGEKKMREAGIKLSTASPAMTAAIKQRTSGMEGAWIASAKKKGIDGAAFLAAL
                     RAEVKKVAGGS"
BASE COUNT          411 a          396 c          356 g          335 t
ORIGIN      
        1 cccagagccg ccaagtcagg aaacaaagca ccaagccagc gagcaaattc ataaaatgcc
       61 gttgaatcct ggtaatggcc tcgggaatta atgaatccaa aacatcaacg gtgacatgtt
      121 catcccgcgc tgtgaccagc ggcagcgccg cataaatcaa aataaccagc aaatattcag
      181 taatttcaaa accgcccgga atcggcgcgt tgaaaccata acgagcccag acgtcaacaa
      241 acgtcagcac catcatggca aaaagaacaa gattcgccat cccggcgagc aagcggttta
      301 accgcgatac ccaccgggac aacaaagtaa agatagatga agtcactgca gagatttaac
      361 ttccgcctgc aaccttttta acttcggcgc gaagagcagc caggaaagcc gccccatcga
      421 tgcctttttt cttggccgaa gcaatccagg cgccttccat accactggtg cgctgtttga
      481 tcgcagccgt cattgccggg cttgcggtgc tcaatttaat accggcttca cgcatttttt
      541 tctcgccgta actatcggcg gcgtcccagg ccagaccgga cagccgcgca aatgcctcac
      601 cagagacctt tgagactgcc tggcggtcag tagcagacaa accatcaaac ttgccgttat
      661 tcataatcaa agcaaatcct gcacggtaaa cgccgcccgg aacgataacg ccccatttga
      721 tgactttgtc gattttgaag gaaacaacgg tttctttagg tacgatcact ccgtcggtca
      781 cgcccttgga catcaattca taaagctggc tgaccggttt tgataccggc acggcgccga
      841 tggctttggt cacatcgcga gcagcgccac caacacgaat tttcatgcct ttgagtgaag
      901 cgagagtgtc gattggtttg gttgcgctga aaatagcacc aggaccttga gtgaacaacg
      961 acaaaagttt gacgcccttg tgttcgtctt tagcggccag catacgatta tgcatgcgcc
     1021 aataagccac cgaaagactg acgccgtcat ctgccaggaa cggcaattcg acgcctttag
     1081 tgagaacaaa acgtcccggc gtataaccat ggacgataaa agtcacatca gccaaaccat
     1141 cgcggatagc attgaaatgc tgttttgaac ccgccacttt tttcggcagt gtgcggatcg
     1201 atactcttcc gctggttgct tctttcacct gggccgccca aggagtcagc attttggtgt
     1261 taattgcatg ggtccgggga acccaaaccg acatcgttag ttctttagct gaactggaat
     1321 ctgtcggggc agaaatcccc agggtaacga cagaaatcgc aacgagatga gattttatat
     1381 attttgaata catgggaagt gatcctctct gttgtaggtt gcaagattgt tggcttgacc
     1441 ctccagtttt agatcgagcg atcaagtcag atagagccca aaaaaaagaa gtacggtg
//
LOCUS       DASCNL010000255         2662 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000570584, whole genome shotgun sequence.
ACCESSION   DASCNL010000255 DASCNL010000000
VERSION     DASCNL010000255.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2662)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2662)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2662
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000570584"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>2662
                     /gene="ileS"
                     /locus_tag="QF359_03470"
     CDS             <1..>2662
                     /gene="ileS"
                     /locus_tag="QF359_03470"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HJO86001.1"
                     /translation="ELLARWNRLDLYKRLREDAQGREKFILHDGPPYANGNLHIGHAL
                     NKILKDVIVRSQQMLGKDSNYVPGWDCHGLPIEWKIEEKYRKKGANKDDVPIAEFRQE
                     CRDFAEYWIDVQRDEFKRLGIEGDWDNPYTTMTYPAEAQIVRELGKFLMNGSLYRGAK
                     PVMWSVVEKTALAEAEIEYHDHTSNTIFVRFPVTDASKSDKAKGADVVIWTTTPWTIP
                     GNRALAYSAKDSYVRLKITEVSEEAVEKWQTKTGDEIIIAEALISQVVEETGITAHEI
                     AGTFKGSDLAGTICQHPFNGQGYDFEVPLLTADFVEMDTGSGFVHIAPGHGADDWELG
                     IANGIAVPDTVGGDGLYFEHVPLFAGVHVFKADDVVIEAMKEAKALLANGKINHSYPH
                     SWRSKAPLIFRNTPQWFISMDSNNLRDKALRAIKETEFYPTSGRNRLHDMIAERPDWC
                     VSRQRAWGVPITVFVHKESGEVLRDQAVLDRIIEAVEAEGADAWFASDAARFLGDSYN
                     AEDYEKIDDILDVWFDSGSTHSFVLEQRDDLQWPASLYLEGTDQHRGWFHSSLLESCG
                     TRGRAPYDAVLTHGFVMAEDGQKMSKSLGNITAPQEVVKHHGADILRLWVVGSDYSDD
                     LRIGKEIIKHHSDIYRRLRNTLRFLLGNLNGFDEAEKLPIDEMPDLDCWVLHRIYELD
                     AMIRKACEKFEFHLLFTELHNFCAVDLSAFYLDIRKDALYCDSADALTRRAARTVLDQ
                     LFNCLTAWFAPFICFTAEEAWLARFPDDNNSVHLRLFPDIPKTWKNDELAAKWEKIRD
                     LRRVVTGALEIERAEKRIGSSLQANPSIFANADFITALKGLDLAEITITSDAQLTEGD
                     VPEGAFTVEDVPGVGVQPNLAEGEKCVRCYK"
BASE COUNT          670 a          672 c          688 g          632 t
ORIGIN      
        1 ggaattactg gcgcgctgga accggctcga tctatataaa cggctgcggg aagacgccca
       61 aggccgggag aaatttattc ttcatgatgg gccgccctac gccaacggta atctccatat
      121 cggccacgcc ctcaataaaa ttctcaaaga cgttattgtg cgctcgcaac aaatgctcgg
      181 caaagattca aattatgtgc cgggatggga ctgccacggc ctgccgatcg aatggaagat
      241 cgaagaaaaa taccgcaaaa aaggggcaaa taaggatgac gtgccgattg cagaattccg
      301 tcaggaatgc cgcgattttg ccgaatattg gattgatgtt cagcgcgatg aatttaaacg
      361 tctcggtatc gaaggtgatt gggacaatcc ctacaccacc atgacctatc ctgccgaagc
      421 ccagattgtg cgcgagcttg gtaagttttt gatgaatggc agcctttacc ggggggccaa
      481 gccggtgatg tggtcagtgg tcgaaaaaac cgccctcgcc gaagcagaga tcgagtatca
      541 cgaccatacc tccaacacga tttttgtccg cttcccggtc accgatgcat caaaatccga
      601 taaagccaaa ggggccgatg ttgttatttg gacaacgacg ccttggacca tccccggcaa
      661 ccgggcgctc gcctacagcg ccaaagacag ttacgtccgc ctaaaaatca cggaagtcag
      721 cgaggaagcc gtagaaaaat ggcagaccaa aaccggtgac gaaataatta ttgccgaagc
      781 cctgatcagc caagttgttg aagaaacagg cataaccgct cacgaaatcg ccggtacatt
      841 caagggcagt gatctcgctg gcaccatctg tcagcatcca ttcaatggtc aaggctacga
      901 cttcgaagtg cccctgttaa cggctgattt tgttgaaatg gataccggct caggctttgt
      961 ccatattgca ccaggccatg gcgctgatga ctgggaactc ggtatcgcca atggcattgc
     1021 cgtgcccgat accgtcggcg gggacggcct ttacttcgag catgtgccgc tctttgccgg
     1081 cgtccatgtc ttcaaagccg atgacgtcgt gattgaagcg atgaaagaag ctaaagcgct
     1141 attggccaac ggtaagatca atcactccta tccgcattcc tggcgttcca aagcgccgtt
     1201 gattttccgc aatacgccac aatggttcat tagtatggac agcaataatt tgcgcgataa
     1261 agcgttgcgc gccatcaagg aaacagaatt ttatccaacc tccgggcgca accggttaca
     1321 tgacatgatc gccgagcggc ccgattggtg tgtttcccgc caacgagcct ggggcgtgcc
     1381 gatcacggtc tttgttcata aagaaagcgg tgaggtactg cgcgatcaag cagtactgga
     1441 tcgcattatt gaggcagttg aagccgaagg agcagatgcc tggtttgctt cagatgccgc
     1501 gcgattcttg ggcgattctt ataacgccga agattacgaa aaaatcgatg atattctgga
     1561 cgtctggttc gattccggtt caacccattc ctttgtgctg gaacaacgag atgacctgca
     1621 atggccggcg tcactttatc ttgaaggcac cgaccagcat cgcggctggt ttcattcatc
     1681 gctgcttgag agctgtggta cgcgtggccg cgcaccttat gatgctgtcc taacccatgg
     1741 ctttgtgatg gccgaagacg gtcagaaaat gtcgaaatca ctcggtaata ttaccgctcc
     1801 acaggaagtc gtcaaacatc acggcgctga tattctccgc ctctgggtgg ttggctcgga
     1861 ttactcggat gatctcagaa ttggcaaaga aattatcaaa caccattcgg atatttaccg
     1921 gcgcttgcgc aatacgttgc gttttttact cggcaatttg aatggttttg acgaagctga
     1981 aaaactgcca atcgacgaaa tgccggatct tgattgctgg gtactacacc gcatttacga
     2041 actggatgcg atgatcagaa aagcctgtga gaaattcgag tttcacttac tatttaccga
     2101 attgcataat ttctgtgcgg tagatttatc ggccttttat ctcgatatcc gcaaagatgc
     2161 actttactgc gatagcgcgg atgctttaac ccgccgcgcc gccagaaccg ttctggatca
     2221 attgtttaac tgcctgaccg cttggtttgc accgtttatt tgttttaccg ctgaagaagc
     2281 ttggttggcg cggtttccgg acgacaataa cagtgtgcat ttgcgtttat tcccggacat
     2341 tcccaagacg tggaaaaatg atgaactcgc cgcaaaatgg gagaaaatcc gcgatctccg
     2401 ccgcgtcgta accggggcgc tggaaattga acgggctgag aagcggatcg gctcatcact
     2461 tcaggcgaac ccgtccattt ttgccaacgc tgattttatc accgcactga agggattgga
     2521 tttggcggaa attaccatca cctccgatgc ccagctcacc gaaggcgacg tgccagaagg
     2581 agctttcacg gtcgaagatg tccctggtgt cggcgtccag cccaatttgg ccgaaggtga
     2641 aaaatgtgtt cgctgttaca aa
//
LOCUS       DASCNL010000256         1758 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000579069, whole genome shotgun sequence.
ACCESSION   DASCNL010000256 DASCNL010000000
VERSION     DASCNL010000256.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000579069"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..710
                     /locus_tag="QF359_03475"
     CDS             <1..710
                     /locus_tag="QF359_03475"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJO86002.1"
                     /translation="LDPVVSPEKIVEGHAAVEEFGALLEELIAERRTTPEGGEMGEVL
                     AALIFGEIDGDKLTPVELVQNCIFLLNAGHETTANLVGNGISILLDYPDQLQRLRDDP
                     SLIKSAVEEFLRFQSPLQIGNRKATEGVEFGPEGGRVEIPAGAFVHTSIGAANRDPEQ
                     FEYPEEVDIGRQPNPQLAFGIGKHICMGNTLGRIEGHVAVGKFVARFPNLRAAGEKRY
                     HGRARFRGLDVLPVAVS"
     gene            726..1469
                     /locus_tag="QF359_03480"
     CDS             726..1469
                     /locus_tag="QF359_03480"
                     /inference="COORDINATES: protein motif:HMM:NF014035.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HJO86003.1"
                     /translation="MSEFFADLLTIQFAYAVGIVFLGGLLHGYTGWGGGLVMMPLLTL
                     IYSPVEALMIAAIGGLLLMARMYPQAIRTANWLEMRPLYLVMLVATPLGGLLLLILDP
                     GLVRKVIGGIIVAASLLIVSGWQYRGTCGVAAASIFGCISGVVNGFAGVGGPFFVIYI
                     IAHPDEPSVQRANIIIAAGLQILLIVVTLAATGAVSWDVFLLGLILAPAQFLSGLIGV
                     RIFALAPQEMYKKFTLIAIVILGASVVIF"
BASE COUNT          371 a          411 c          479 g          497 t
ORIGIN      
        1 cccttgatcc agtggtctcg ccggaaaaaa ttgtcgaggg tcacgctgcc gttgaagagt
       61 ttggcgcgct gttggaagag ctgattgccg agcgtcgcac cacaccagag ggcggcgaaa
      121 tgggtgaagt gctggctgca cttatttttg gcgaaattga cggtgacaag cttacgcctg
      181 ttgaactggt gcaaaattgt attttcctgc tcaacgccgg gcatgaaaca actgctaatc
      241 tggttggtaa tggcattagt attctgctcg actacccaga ccaattgcag cgtctacgcg
      301 atgatccgag cctgatcaag tcagcggtcg aagagttttt gcgtttccaa tcacccctgc
      361 aaatcggcaa ccgcaaagct acggaaggcg ttgagtttgg cccggaaggt gggcgtgtcg
      421 agataccggc aggtgcattt gtccatacca gcattggcgc tgccaaccgt gatcctgaac
      481 aattcgaata tccggaagag gttgatattg gccgtcagcc aaatccgcag cttgcttttg
      541 gtatcggcaa acatatctgt atgggtaata cactaggccg gatcgaaggc catgtcgcgg
      601 tgggcaaatt tgttgcccgg ttcccaaatc tgagggcggc gggagagaag cgctaccatg
      661 ggcgcgcccg ctttcgcggt cttgatgtct tgccggttgc ggtttcctag cgtatctccc
      721 tctttatgtc cgagtttttt gctgatctgt taaccatcca attcgcctat gcggtgggca
      781 tcgtatttct gggcggcctc ttacatggct acaccggctg gggtggcggt ctggtgatga
      841 tgccattgct tacattgatc tattctccag tagaggcctt gatgattgct gcaatcggtg
      901 gcctgctatt gatggcgaga atgtatccgc aggccattcg aacagccaat tggctggaaa
      961 tgcgaccact ttatttggtg atgttggtag ctacaccttt gggtggatta ctgctgttaa
     1021 ttttagaccc tggcctggtg cgcaaagtta ttggcggcat tattgttgct gcctcattgc
     1081 tgatcgtgag tggctggcaa tatcgcggca cgtgcggtgt tgcggcggct tcaatatttg
     1141 gctgcatttc cggcgtggtt aatggctttg ccggagtcgg tggacctttt tttgtcatat
     1201 acatcattgc tcatccagat gaacctagcg tgcagcgggc caatattata attgcggccg
     1261 gtttgcagat tttacttatt gtggtcacgc tggccgcaac cggtgccgtc agttgggatg
     1321 tctttctatt gggactaatc ctcgcaccag cacaattttt gagcggtttg atcggggtga
     1381 ggattttcgc cctggcccca caggaaatgt ataaaaagtt taccctgatc gccattgtga
     1441 tactcggcgc atcagtggtg atcttttaaa tttattctgg atcaaagaaa gccagcgttc
     1501 tgatctcaat gctttctcgc ggcggcgcac cctcagccgt catcggatcg tcaaaagacg
     1561 ggcgggctag gtttttcgcc catacgtttt ttagcaatcg gcaattttat ttgaattgcc
     1621 aaaaacccta gaatgcgacg gaccgtcaac atcgcggaga gattgccgac tggctgaagg
     1681 cgcttcctct agattttggt ggctcgttac tatcaataat tagattttaa tatcataaaa
     1741 tacattttca tatcgtag
//
LOCUS       DASCNL010000257         1821 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000579998, whole genome shotgun sequence.
ACCESSION   DASCNL010000257 DASCNL010000000
VERSION     DASCNL010000257.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000579998"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="QF359_03485"
     CDS             complement(<1..469)
                     /locus_tag="QF359_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86004.1"
                     /translation="MSKSAIIAIIGGVVVVAAIALNFVLESVDEEAAREETAKTQVEK
                     KGPAKPAPKIETKTKTLQITAPSFDIVRITPQGDTVMAGRAKPGVKVAIYDGANKIGE
                     VVANKRGQWVFVPTSPLAPGNRRLSLKMINPDGSAVASESDVVLVVPEKGKDIA"
     gene            complement(571..1386)
                     /locus_tag="QF359_03490"
     CDS             complement(571..1386)
                     /locus_tag="QF359_03490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86005.1"
                     /translation="MTGLIWRLGREDSGIALANASVGASFAWVTALVLGTPAFPPAFN
                     SSAILSATVALLIIGIILDLCLTAETKFGRLIETGAIILSAIGAVAWMQGGIDVWSIL
                     ILIGWGVTIFNLQRMGTRATPAGGPTRGYGSNRASLLLVLASVGLGFIAWISDIIVDR
                     DLAFGLAASSLGFYVWNWPQPRLFFGRSILLAGGGGMLMIALRLLEQAPPLAPAIILL
                     GFIFFIDSALRNLPPRFDTILKFSPSLTIIVLAAIPLLLTTIATVIAIEIQID"
     gene            complement(1506..1667)
                     /locus_tag="QF359_03495"
     CDS             complement(1506..1667)
                     /locus_tag="QF359_03495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86006.1"
                     /translation="MINSGRLPDGNFVGSTMTEVIENLTKLTPQDLKVIVVYLKSIPS
                     ISNKVSSKK"
BASE COUNT          498 a          452 c          421 g          450 t
ORIGIN      
        1 cggcaatgtc tttgcctttt tccggcacca ctaaaaccac atcggattca gaggcaacag
       61 cggagccatc gggattgatc atttttaagg aaagccgacg gttgcctggc gccaaaggtg
      121 aggtcggtac aaacacccac tggcctcttt tattggcgac aacttcacca attttatttg
      181 caccatcata tattgccact tttacgccag gtttggcgcg accggccatc acagtgtcgc
      241 cttgtggcgt gatgcggaca atatcgaaac taggggcggt gatttgtaga gtttttgttt
      301 ttgtttctat tttaggggca ggttttgccg ggcctttttt ctcaacctgc gttttggctg
      361 tctcttcacg agctgcttct tcgtcaacac tttctaaaac aaaatttaat gcaattgccg
      421 ctaccacgac gacaccgccg ataatggcta taattgcgga tttactcacg cttttttacc
      481 cctttattaa ctttaataat agttaaatca gactaatacc actgtgcttt ttaagcaatc
      541 ctaacctcgg ccaaacctca gttaaacctt ttagtcgatt tgaatttcta tggcaattac
      601 ggtggcgatg gtggtcaata aaagtggaat cgctgccaat acaataatcg tcagggaagg
      661 agaaaatttg agaattgtgt cgaagcgtgg cggtaaattt cgcaatgcac tatcgataaa
      721 aaagataaag ccgagcagaa ttatcgccgg tgccaatggt ggcgcttgtt ccaggagcct
      781 taacgcaatc attaacatgc cgccaccacc ggccaataaa atgctccgac caaaaaataa
      841 tctaggctgc ggccaattcc agacataaaa tccgagcgag ctggcggcca agccaaaggc
      901 gagatcgcga tcaacaatta tatcactaat ccaagcaata aagcccaatc ctacagaagc
      961 cagcacgaga aggagactcg ccctattact gccatatcct cgggtagggc cgccggccgg
     1021 cgtagcgcgg gtgcccatac gttgcagatt aaaaatagtc acaccccagc caataagaat
     1081 tagaattgac cacacatcga taccgccttg catccacgcg acagcgccaa tcgcacttag
     1141 aataattgcg ccggtttcga tcaggcggcc aaatttcgtc tcggcggtca aacaaaggtc
     1201 gaggattatg ccaataatta atagcgcaac cgtggcagat aagatggcgc tgctgttaaa
     1261 tgctggcggg aaggccggag tgccgagaac caacgccgtg acccaggcaa agctggcgcc
     1321 aaccgatgca ttagcgagcg caatcccgga atcctctctg cccagacgcc aaataagccc
     1381 cgtcaaaagg atcgttccaa aaaacggtaa aacgaacaac aggataaatg agttgttgag
     1441 tatatccacc ataggcaagc cctagcgcga ttcgccctta aatcaaaaga cttaaattag
     1501 ttgcgctatt tctttgagct gactttgttg ctgatcgatg ggatagattt taaataaaca
     1561 acaatcacct ttagatcttg aggcgttagt ttggtaagat tttcgataac ctcagtcatg
     1621 gtgctgccga caaaattacc gtccggtagc ctgcctgaat tgatcacgtc agcgatctcc
     1681 gctgctgacc atttgccgat gccggtggct tagtcaggtg taatattggg cgctgcttca
     1741 cctgccgggc cgtcgggtgt gccgctgaga aatttactca tatcgctggc acctaaaaaa
     1801 ttgcgcgagg tatggcactc g
//
LOCUS       DASCNL010000258         2508 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000580228, whole genome shotgun sequence.
ACCESSION   DASCNL010000258 DASCNL010000000
VERSION     DASCNL010000258.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2508)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2508)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000580228"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1624)
                     /locus_tag="QF359_03500"
     CDS             complement(<1..1624)
                     /locus_tag="QF359_03500"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HJO86007.1"
                     /translation="MYQYDQTDHTLIKERVVEYRDQVSRRLEGNISEDDFRPLRLKNG
                     LYLQLHAYMLRVAIPYGLMSSDQLRMLAYIGRKYDKGYGHFTTRQNLQYNWPTLEDTP
                     DILENLASVEMSAIQTSGNVNRNVTSDPYAGVAPDELEDPRPYAEIIRQFVTLHPEFS
                     WLPRKFKIAITGAEDDRAAINVHDIGLKLKKNAAGEIGFIVLVGGGLGRSPFIGKVIR
                     EFLPKDDLIRYIQAILRVYNLEGRRDNLYKARIKILVHELGIEKFAGLVEEEFEASKS
                     DILFIGRAEEDRIKAFFAAPDYAELSDDVPAVTKAAADDAAFAHWLERNVLPHKQPGY
                     ALVNLSLKPLGGVPGDITSDQMDAVAKLADKFSFGQIRATHRQNLILSDVAKRDLPAL
                     WQELVRLNLATPNIDRLSDIICCPGMDYCSLATARSIPIARRLSERFDHLDRLIDIGE
                     IRLNISGCINACGHHHVGHIGILGVEKNGEEFYQVTLGGSSSEDADIGQIIGPAFSSE
                     EIIDAVEKVVGAYISNRHDNERFLETYRRLGQN"
     gene            complement(1646..1927)
                     /locus_tag="QF359_03505"
     CDS             complement(1646..1927)
                     /locus_tag="QF359_03505"
                     /inference="COORDINATES: protein motif:HMM:NF022464.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2849 domain-containing protein"
                     /protein_id="HJO86008.1"
                     /translation="MTHRMVTANRLHDGAVVYLAADKDWTRNVESGLVADSSDPEKLL
                     AIAELAVQDQIIVAPYLIEVEVAANSIRPIRFREQIRAKGPSIFAPTAE"
     gene            2244..>2508
                     /locus_tag="QF359_03510"
     CDS             2244..>2508
                     /locus_tag="QF359_03510"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJO86009.1"
                     /translation="MNQPTPESDADLLRKIKNGDSAAARILVDQNLDRIVNYGYRMLG
                     DRVEAEDVAQEAFLRLWRNIDKWRAEKPVIHWLQRVTYNQCIDR"
BASE COUNT          681 a          557 c          608 g          662 t
ORIGIN      
        1 gattttggcc aaggcggcga taagtctcaa gaaagcgttc attatcatgg cggttcgata
       61 tgtaggcacc gacaactttc tcgacagcat caattatttc ttccgacgaa aaagccgggc
      121 ctataatttg accaatatct gcatcttccg aagaagaccc gcctaacgtc acctggtaaa
      181 actcttcacc gtttttttcg acgccgagaa tgccgatatg accgacatgg tggtggccac
      241 aagcattgat gcagcctgaa atattcaatc gaatttcacc aatatcaatt agcctatcca
      301 aatggtcaaa gcgttcgctg agacgccttg caatcgggat agaacgggct gtcgccagac
      361 tgcagtagtc catgccgggg cagcaaataa tatccgaaag gcgatctata tttggcgtcg
      421 ccagattgag ccttaccagt tcctgccaca gcgccggtaa gtcccgtttg gcgacatcgg
      481 acaatatcag attttgccga tgggttgccc gaatttgacc aaaactgaat ttgtcggcca
      541 attttgcgac tgcgtccatc tggtcagatg tgatatcacc cggcacgccg ccgagcggtt
      601 ttaaagacaa gttaaccagt gcataacctg gctgtttatg tggcaataca ttgcgctcca
      661 gccagtgggc aaaagctgca tcatcggccg cggcctttgt tactgctggc acgtcatctg
      721 atagctcggc gtagtcgggc gcggcaaaaa aagctttgat gcgatcttct tcagcgcgac
      781 cgatgaataa tatatcgctt ttcgaggctt caaattcttc ctcgaccagg ccggcaaatt
      841 tttcgatccc caattcatga accaggattt taatacgcgc tttgtacaaa ttgtcgcggc
      901 ggccttccaa attataaacc cggaggattg cttgaatgta gcggatcaaa tcatctttcg
      961 gtaaaaattc gcgaataact ttgccgataa aaggcgagcg tcccaatcca cctccaacca
     1021 aaactataaa accgatctcg ccggcggcat tttttttcag tttcaagcca atgtcgtgca
     1081 cattgatggc agcgcgatca tcttcggcac cggttatggc aattttaaat ttgcgaggaa
     1141 gccacgagaa ttccggatgc aaagtcacaa attgccggat gatttcggcg taggggcgcg
     1201 ggtcctctaa ttcatctggc gcaacgccgg cataggggtc cgaggtgaca ttgcgattaa
     1261 cattgccgct ggtttgaatg gcactcattt cgacggaagc aagattttcc aggatatcag
     1321 gcgtgtcttc aagggtgggc caattatatt ggaggttctg gcgggtggtg aaatggccat
     1381 agcccttatc atatttgcgg ccgatatagg cgagcatgcg caattgatca gacgacatca
     1441 gtccataggg aatggcgacc cgcaacatgt aggcatgcaa ttgcagatag agtccatttt
     1501 taaggcgcag agggcggaaa tcgtcttctg agatattacc ttccaaacgg cgggaaacct
     1561 gatcacgata ttcgacgacc cgttccttaa tcagtgtgtg atcggtttga tcatattgat
     1621 acattgattt ctgctttctt gtgatttatt cggcagtcgg tgcgaaaatt gacgggcctt
     1681 tggctctaat ttgctcgcga aagcgaatcg gacggataga gttggccgcg acttcaactt
     1741 caattagata gggcgcgaca atgatctggt cttgaacggc aagttctgca atggccaaca
     1801 acttttcggg gtcgctagaa tctgccacca aaccggactc aacattgcgc gtccaatctt
     1861 tgtcagcggc caaatacaca acagcgccgt catgtaagcg atttgcggtc accatgcggt
     1921 gggtcatttt caacactttt ttggtcctat aaattacata atatttatga tgaaaatata
     1981 tattactcaa aattaaatgt aaataaaaaa taaacacaaa gaattaatgt taataattac
     2041 cagctaagtt atgttatttt accgaaaccg acggaatata gatagaaggc cgttaagcta
     2101 acaaagttga ttgttgtttt tttggaaagg gatagcggca gattagaaca aatagttgtg
     2161 ttattctgga aaatgaatgt cgaccgggta gttcaggtgg atatagtagc ggtgaaccaa
     2221 agctcggacg aaccgtttat tacatgaacc aaccaacacc tgaatctgat gcggacttat
     2281 tacgtaaaat caaaaatggt gattctgcgg ctgcccggat attggtggat caaaacttgg
     2341 atcgaattgt aaattatggc tatcgcatgc ttggtgatcg cgttgaagca gaagatgtgg
     2401 cgcaggaggc gtttttgaga ttgtggcgta atattgataa atggcgggcc gagaaaccgg
     2461 ttatccattg gctgcagcgt gttacctaca accaatgcat tgatcgat
//
LOCUS       DASCNL010000259         1229 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000580822, whole genome shotgun sequence.
ACCESSION   DASCNL010000259 DASCNL010000000
VERSION     DASCNL010000259.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1229)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1229)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000580822"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="QF359_03515"
     CDS             <1..328
                     /locus_tag="QF359_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HJO86010.1"
                     /translation="LETDVWSHKQLLKVVSHTPIEVDGLNKFQAAGAWIDAVRKIIPP
                     EEQIFSWWSYRSKDWTINDRGRRLDHIWVNEPMRDKITDIQILRDARSWEKPSDHVPV
                     TVTIKL"
     gene            complement(407..925)
                     /locus_tag="QF359_03520"
     CDS             complement(407..925)
                     /locus_tag="QF359_03520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86011.1"
                     /translation="MLPILGRILWSNAQHSDTPVLPDRIRANNRQQQQDREKLIGWIQ
                     LGIVSIFSTLYAVSPAAFTISNNIRQVPYILATYFVITIIRLYLMYRHVLPGWFISLS
                     VVADIALLMITIWSFHLQYGQPLSFYLKAPTLLYIFIFIALRALRFEARYIVLAGGVS
                     ALGWVLIFYMLF"
     gene            complement(961..>1229)
                     /locus_tag="QF359_03525"
     CDS             complement(961..>1229)
                     /locus_tag="QF359_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJO86012.1"
                     /translation="ADKLMLDNETEKKVRLTDKETAIVKFLYLAGEQVVGRDVLLGEV
                     WNYNAGVTTHTLETHVYRLRQKIERDPSNAELLVTEPNGYRLVP"
BASE COUNT          361 a          277 c          296 g          295 t
ORIGIN      
        1 gctggaaact gatgtctggt cacacaaaca attattaaaa gttgtttcgc atacgccaat
       61 agaagtcgat ggtttgaaca agtttcaagc ggccggcgcc tggatagacg cggtcagaaa
      121 aattattccg ccggaagaac aaattttcag ctggtggagc taccgctcca aagactggac
      181 aattaatgat cgcggtcgcc ggttagacca tatttgggtc aacgaaccaa tgcgagataa
      241 aattactgac atacaaattt tgagggatgc acggagttgg gaaaaacctt ccgaccatgt
      301 gccagtgacc gtaactatta aattatagtc tagtgggtgg cctgttccgc tagcgcaacg
      361 agatccatgg tgtgaccacg ggtaatcatc gggttaccgg gctcggctaa aataacatat
      421 aaaaaatgag cacccaaccc agggctgaaa cgccaccagc caatacgatg tagcgcgctt
      481 caaacctaag cgccctcaaa gcaataaaaa taaagatgta gagcagcgtc ggcgctttta
      541 gataaaacga aagcggctgc ccatattgca gatgaaagct ccaaattgta atcatcaata
      601 aggctatgtc ggcaacgacg gacaggctaa tgaaccagcc tggcaagaca tggcggtaca
      661 ttaaataaag ccggattatt gtaatcacaa aataggttgc tagaatgtac ggcacttgtc
      721 gaatgttatt actaatcgta aacgccgcgg gcgagacggc atagagggtc gaaaatatcg
      781 aaacgatacc gagttgaatc cagccaataa gcttttctct atcttgctgc tgttgcctat
      841 tgttagcgcg aatgcggtcc ggcagaacgg gggtgtctga gtgttgcgca ttgctccata
      901 aaatccggcc aagtattggc aacattcatc acttcgtgtt cagaccgtta tggcaaatat
      961 tcaaggaacg agacgataac cgtttggttc tgtcaccaaa agctcggcat tggaaggatc
     1021 gcgttctatc ttttggcgca ggcgatagac atgggtttcc agtgtatggg tcgtcactcc
     1081 agcattatag ttccagactt cgccaagcaa aacgtctcgg ccaaccacct gctcacctgc
     1141 aagataaaga aacttaacaa tagcggtttc tttatcagta aggcgcacct ttttctcggt
     1201 ttcattatcg agcatcagtt tgtctgcgg
//
LOCUS       DASCNL010000260         1735 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000580912, whole genome shotgun sequence.
ACCESSION   DASCNL010000260 DASCNL010000000
VERSION     DASCNL010000260.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000580912"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..540)
                     /locus_tag="QF359_03530"
     CDS             complement(<1..540)
                     /locus_tag="QF359_03530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HJO86013.1"
                     /translation="MSLQKKLRERLNVPEILLAPGIYDAFGAMMAERAGFDALYLSGA
                     SIAYTKLGRPDIGLITADELATIVGTIRERTNLPLIVDADTGFGNALNVQRTIKMLER
                     KGASAIQIEDQSLPKRCGHLEGKTLVSADEMKGKIKAALDARRDQDTLIVARTDAIGV
                     EGYDLAMERAVGMVEAGADV"
     gene            complement(551..1039)
                     /locus_tag="QF359_03535"
     CDS             complement(551..1039)
                     /locus_tag="QF359_03535"
                     /inference="COORDINATES: protein motif:HMM:TIGR02087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase"
                     /protein_id="HJO86014.1"
                     /translation="MSGRVWKFGDDVNTDVLAPGIYIKLPLEELASHCLETITPNFAN
                     EVREGDFVVGGKNFGIGSSREQAAQVLKALGIAAVIAPSFGGIFYRNAFNLGLPAIVL
                     DTINQIDDKHELEIDLKTGGIKNVSTGHDLTGEAIPENLLALVEAGGLVPFLEHKLGK
                     NG"
     gene            complement(1036..>1735)
                     /locus_tag="QF359_03540"
     CDS             complement(1036..>1735)
                     /locus_tag="QF359_03540"
                     /inference="COORDINATES: protein motif:HMM:NF012550.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HJO86015.1"
                     /translation="YQAVQYSGETIENLDMMERMTLCNMAAELGAQAGLIEPDETTAT
                     YITAAGGDPGDWAAFCSDSDAEYKTTHEFATTDLAPQVAAPHSPANAADVSDIEHTEI
                     DQFYIGACTGAKLNDLEMAAAVLKGNKIAPSKRLTIAPASSQILTAATKQGIIEILLN
                     AGSNLLPPGCGACAGYGVGVLAEDEVCLASTARNFQGRMGASSSKVYLASPYTVAASA
                     VAGHITDPRVVLAS"
BASE COUNT          392 a          453 c          442 g          448 t
ORIGIN      
        1 aacatcggcg cccgcttcga ccatgccaac ggcgcgttcc atggccagat catagccttc
       61 aacgccgatg gcatcagtgc gggcaacgat caaggtgtct tggtcccggc gggcatcgag
      121 ggcggcctta attttaccct tcatttcgtc tgcgctaacc aatgttttgc cctcaaggtg
      181 accgcagcgt ttcggcagcg attgatcctc gatttgaatg gccgatgcgc cttttcgttc
      241 cagcattttg atcgtgcgct ggacattgag ggcattgcca aatcccgtat cagcatcgac
      301 gatcaatggt agatttgtgc gttcgcggat ggtgccgacg atagtggcaa gttcatcggc
      361 agttataagt ccgatatcgg gccggcctaa ttttgtgtag gcgatcgacg cacctgataa
      421 atagagagcg tcaaatccgg cgcgttccgc catcatcgca ccgaaggcgt catagatgcc
      481 cggtgctaat aatatctctg gcacatttaa ccgttctctt agtttttttt gcagcgacat
      541 ggccgtcccc ttatccattt ttaccaagtt tgtgttctaa aaaaggaacc agtccaccgg
      601 cttcaacaag ggccagtaaa ttttccggaa tggcttcacc ggttaaatca tggccggtag
      661 atacattttt gatgccaccg gttttaagat caatttcaag ctcgtgcttg tcgtcgattt
      721 gattgatggt gtccaagaca atcgccggca ggccgagatt aaaagcattg cggtaaaata
      781 taccgccaaa agatggagcg attacagcag cgatacctaa ggcttttaac acctgcgccg
      841 cctgttcgcg gcttgagcct atgccaaagt ttttgccgcc gacgacaaaa tcaccttccc
      901 ggacctcgtt ggcgaaattt ggcgtgatgg tctccaggca atgcgacgcc aactcttcga
      961 gaggcagttt tatataaatg ccgggtgcca ggacgtctgt attaacgtca tcaccgaatt
     1021 tccacacccg tccgctcatg atgccaagac cactcgggga tcggtgatgt gaccggccac
     1081 tgcactggcg gcaacggtat aaggtgaggc gagataaacc ttcgaagagc ttgctcccat
     1141 gcggccttga aaattacgtg ccgttgaggc gaggcacact tcatcttcgg ccagcacacc
     1201 gacgccatag ccggcacagg ctccacagcc cggcggtagt aaatttgacc cggcattaag
     1261 caatatctcg ataatcccct gtttggtcgc tgcggtgaga atttgtgatg atgctggcgc
     1321 gatggttagg cgtttgctgg gtgctatttt gttaccttta agtacggctg ccgccatttc
     1381 gagatcgttc agttttgcgc cggtgcaagc tccaatataa aactggtcaa tctcagtatg
     1441 ttcgatatca ctgacgtctg ctgcattagc tggcgaatgt ggtgctgcga cttgaggtgc
     1501 taaatcagta gtagcgaact catgggtggt tttatattcc gcatcagagt cgctgcaaaa
     1561 cgctgcccaa tcacccggat cgccacctgc agcggtaata taagtggcgg tcgtttcatc
     1621 aggctctata agaccagcct gagcgcccag ttctgccgcc atattacaca gcgtcatacg
     1681 ttccatcatg tcgagatttt caattgtctc accgctatat tggacggctt gatag
//
LOCUS       DASCNL010000261         1301 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000583095, whole genome shotgun sequence.
ACCESSION   DASCNL010000261 DASCNL010000000
VERSION     DASCNL010000261.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1301)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1301)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000583095"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            27..>1301
                     /locus_tag="QF359_03545"
     CDS             27..>1301
                     /locus_tag="QF359_03545"
                     /inference="COORDINATES: protein motif:HMM:NF027515.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HJO86016.1"
                     /translation="MDKPTKDDLSQALIDNQIDLSIVAVRDIIRGVAAAPGPDSAIGA
                     TDNWHALIGDRVSADLANILSVELARVREINDGITETFSTSKRLTNLRQILATQKISG
                     FVIPLADEHQGEYVPKFAQRLAWLTGFTGSAGLAIVLTDKAAIFVDGRYTLQAREQVD
                     NNHFEINHSVDNPADAWISENLKSGNKLGFDPWLHTSDSLSKLRQACDKADAKLVALS
                     SNPVDAVWDNQPPKPITPVEPYDIRFAGQSSAEKRSMISDILKNEGVEASILTAPDSI
                     AWLANIRGGDVPFTPFTLAFGIMHTDGSFDVYTDPRKYSDRILATLDDNIKVHAQADF
                     LPALEELGSNKFKVGLDLTSAVEIILQTLKNSGATVRCLTDPCQLPKARKNKVELAGM
                     RNAHLRDGVALTRFLAWLDENAENGKITEMSAA"
BASE COUNT          352 a          314 c          313 g          322 t
ORIGIN      
        1 atatttagag ctagtagatt atagctatgg ataagcctac taaagatgat ctgtcacagg
       61 ctcttatcga taatcagatc gatctgtcga tcgtggcggt tcgcgatatc attagaggcg
      121 tcgctgcggc gcccggaccg gatagtgcca tcggagcaac tgataactgg catgcgttaa
      181 ttggcgatcg ggtctcagct gatttagcaa acatactttc agtagaatta gcgcgcgtcc
      241 gggaaattaa cgatggtatt accgagacgt tctctaccag taagcgcctc accaatttac
      301 ggcaaatttt agcgacgcaa aaaatatccg gctttgtcat cccattggcc gatgaacacc
      361 aaggcgaata tgtaccaaaa tttgcccaac gcttggcctg gttaaccgga tttaccggtt
      421 cggcgggtct ggcaattgta ctcactgata aagccgcaat ctttgtcgat ggccgctata
      481 ccttacaagc gagggagcag gtagataaca accactttga aataaatcac tcagtcgaca
      541 acccggcaga tgcgtggatc tcagaaaatc tgaaatccgg taacaaactt ggatttgatc
      601 cgtggctgca tacttcggac agcctttcga aattacgcca agcctgtgac aaggccgacg
      661 caaaattagt ggcattaagc agcaatccag ttgatgccgt ctgggataac cagccaccga
      721 agccgataac gccggtggag ccgtatgaca ttcgctttgc tggtcagagt tcggccgaaa
      781 agcgctctat gatatctgat attctgaaaa atgaaggtgt cgaagcgagc atattaaccg
      841 caccagattc aattgcctgg ctcgccaaca tacgtggtgg cgatgtacct tttacgccct
      901 tcaccttggc ttttggtatt atgcacaccg acggctcatt cgatgtttat accgatcccc
      961 gcaaatattc ggatcgtatt ttagcaactt tagacgacaa tattaaagtt cacgcgcaag
     1021 cagactttct gcccgcactg gaagaacttg gcagcaacaa attcaaggtg ggtttggatc
     1081 tgacctctgc cgtcgagata atattgcaaa cattgaagaa ctcgggtgcc actgtccgat
     1141 gtctcactga cccgtgccaa ttgccaaaag cccggaaaaa taaggttgaa ttagctggta
     1201 tgcgcaatgc tcatttgcgt gatggcgtcg ccctgacccg ctttttagcc tggcttgatg
     1261 aaaatgccga gaacggaaaa ataaccgaga tgtcggctgc c
//
LOCUS       DASCNL010000262         2179 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000584136, whole genome shotgun sequence.
ACCESSION   DASCNL010000262 DASCNL010000000
VERSION     DASCNL010000262.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000584136"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(35..208)
                     /locus_tag="QF359_03550"
     CDS             complement(35..208)
                     /locus_tag="QF359_03550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86017.1"
                     /translation="MLMLSHNLGRYAQKLFQIKILELPFEITKILLDMVWHERLDRDP
                     CQAWFRGQVMTIC"
     gene            213..491
                     /locus_tag="QF359_03555"
     CDS             213..491
                     /locus_tag="QF359_03555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86018.1"
                     /translation="MVPVKVEAATTKIGTVGPEAVVDAAAVAGAFQGLDRIANGTGIP
                     IEKAKARMTEDLREELGLNQYSTARLPDGWDKAEDENLDWGPSTHVRT"
     gene            complement(678..1979)
                     /locus_tag="QF359_03560"
     CDS             complement(678..1979)
                     /locus_tag="QF359_03560"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO86019.1"
                     /translation="MLISVIGFVILLLLCFSGFPLGWAMVLVGFGGFGIVRGFEPALA
                     TLGQLILDFSMSYSFSTLPLFILMGAFVYRAALAEDMYDCANAWLGHFRGGLAMATVA
                     ACGGFAAVSGSSAATAATMAKVAIPSMRRFNYDDRLAAGSVAAGGTIGILIPPSIALI
                     IYGILVEEDIGKLFMAGIIPGIFTILLYITTIRIVTVVKKDWGPRGDRTPWAGRFKAL
                     GKVWGIVLLFLFILGGIYGGIFTPSEAGGIGAVGALAFAIARKKMTWPEFYKSLVEAG
                     KTTVFVFTVAYGAIIFSNFINIAGMPDDILEFVNDLNVPPMGVIFAIMVIYVLLGAVF
                     EGIGMILLTVPIFFPVVQSLGFDLIWFGIVVIMVTEISLITPPVGMNVFVLKSMLPDV
                     SLWTIFIGIGPFFVADLVRLALVVLFPPIALWLPSVMVSTG"
     gene            complement(1980..>2179)
                     /locus_tag="QF359_03565"
     CDS             complement(1980..>2179)
                     /locus_tag="QF359_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86020.1"
                     /translation="YLMWLQGVELTEADQVSGFLEWSFAPPAYIISGLSAITVVIIFL
                     MLILHVFWPSSQIAGGKKDGI"
BASE COUNT          635 a          548 c          550 g          446 t
ORIGIN      
        1 attggtgggt ctgttggaga gacggaaaac tatcctagca aatcgtcata acctgaccgc
       61 gaaaccaagc ttgacaggga tcccggtcaa gccgttcgtg ccagaccatg tccagtagaa
      121 ttttggtaat ttcaaatggt aattccagta tttttatctg aaacagtttt tgtgcatagc
      181 ggccaagatt gtgcgatagc atgagcatcc agttggttcc agtcaaggta gaggccgcca
      241 cgacaaaaat cggaaccgtc ggaccagaag ccgtcgttga tgcggcggcg gtcgcgggtg
      301 cattccaagg tttggatcgc atagcaaatg gcaccggtat tcctatcgaa aaagcaaaag
      361 ctagaatgac ggaagatctt cgcgaggaac tcggtttaaa ccagtattcg accgcacggt
      421 taccagatgg ttgggacaag gcggaggatg agaatctgga ttgggggccg agtactcacg
      481 tgcgcacatg agtgctactc cgttccatat aatgtccgct tttagtttgg ggtaggcatt
      541 cgcgtgggcg atccagttta aaatccatac aatttgatac cagctacggt ccggcgttcc
      601 aacgcatcgt gcgttcaaat taaagaaata tgcagggcgt tatcgcgctg accttacccg
      661 gtcgacgatc caaaggccta tcccgtagag accataaccg acggcagcca caaggcgatt
      721 ggtggaaaca acacgacgag ggcaaggcga accaaatcgg cgacaaagaa aggtccaata
      781 ccgatgaata ttgtccataa cgagacgtcg ggcagcattg attttaggac gaatacattc
      841 atcccaacgg gcggtgtaat taaacttatt tccgtcacca tgatgacgac aatgccgaac
      901 caaatgagat caaaacccaa agactgaaca acggggaaga aaatcggtac ggttaacagg
      961 atcatgccga tgccttcaaa gaccgcgccg agcagcacat agatcaccat gatcgcaaaa
     1021 atgacgccca tcgggggcac attcaaatca ttcacaaatt caaggatgtc gtcgggcatg
     1081 cctgcaatgt tgatgaaatt agagaaaatt attgcaccat aggcgaccgt gaacacgaaa
     1141 accgtggttt ttccagcttc aacgagcgat ttataaaact ccggccaggt cattttttta
     1201 cgcgcgatgg cgaaggcaag cgcgccaacc gcgccgatac cgccggcttc gcttggtgta
     1261 aaaatgcctc cgtaaattcc accaagaata aacagaaaaa ggagaacgat gccccagact
     1321 ttgccaagtg ccttaaatcg accggcccat ggcgtacggt ccccgcgcgg gccccaatct
     1381 tttttcacga ccgtgacaat gcgaatagtc gtgatataga ggaggatcgt aaaaattccg
     1441 ggaataatac ccgccataaa tagtttgccg atgtcttctt cgacgaggat gccgtaaatt
     1501 atgagcgcga tactcggcgg tatgaggatg ccaatggtgc cgcccgcggc caccgaaccg
     1561 gcggccagac gatcgtcata attaaagcgg cgcatggacg gtattgcgac cttggccatc
     1621 gttgcggcag tggctgccga acttccagaa actgctgcaa aaccaccaca agcagcaaca
     1681 gtggccattg ccagaccgcc tctaaaatgc ccgagccagg cattggcaca gtcatacatg
     1741 tcttctgcca aggctgctct atacacaaag gcgcccatta agatgaacag cggcaaggtt
     1801 gaaaaactat aactcatcga gaagtcaagg atgagttggc ccagtgtcgc caatgcaggt
     1861 tcgaagcctc gaacgatacc aaagcctccg aaaccaacca gaaccatggc ccagccgagc
     1921 ggaaatccac tgaaacaaag taaaagtagg attacaaacc caatgactga tattagcact
     1981 tagatcccat ctttcttgcc gccggcaatt tggctggacg gccagaaaac atgcagtatc
     2041 agcattagaa atatgatgac cacggtgatc gcactgagcc cactgatgat gtaggcaggc
     2101 ggcgcaaaag accattccag aaaacctgat acctggtcgg cttcagtaag ctcaacgcct
     2161 tgtagccaca tcaggtagg
//
LOCUS       DASCNL010000263         1203 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000585766, whole genome shotgun sequence.
ACCESSION   DASCNL010000263 DASCNL010000000
VERSION     DASCNL010000263.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000585766"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="QF359_03570"
     CDS             complement(<1..410)
                     /locus_tag="QF359_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86021.1"
                     /translation="MIVLNNDLVQDAKGRGLRFFSTNVPIRGTKKMKFRNLAVVIAAL
                     FLVAACESTSTESGKSSGDGKQMAKKQVPDYRIMAKKKGKRKGPPKGFSITPGSSQDL
                     IVNGDRVFFAFDKSNLSSAARGTLEKQAAWLKKYG"
     gene            complement(481..>1203)
                     /gene="tolB"
                     /locus_tag="QF359_03575"
     CDS             complement(481..>1203)
                     /gene="tolB"
                     /locus_tag="QF359_03575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385576.1"
                     /note="forms dimers; may be involved in cell envelope
                     integrity; interacts with outer membrane proteins and with
                     the C-terminal domain of inner membrane protein TolA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HJO86022.1"
                     /translation="SSLVLTPRFSPSPSSQEITYMSYHGKVPRVYLFNIDTGRQELLG
                     DFPGMTFAPRFSPDGNKVIMSVAKDGNTEIYTMDLRTRAEKRLTNHSAIDTSPHFSPD
                     GKRVVFNSDRSGTQQLYVMGANGGRAKRISFGRGRYATPVWSPRGDLIAFTKITGGKF
                     FIGVMDIDGKGERLLAEGFLVESPTWAPNGRVIMYFRETPISKKGGKVSKLYSIDLTG
                     YNEREMVTPMDASDPAWSPLIP"
BASE COUNT          318 a          304 c          265 g          316 t
ORIGIN      
        1 ccatattttt taagccacgc agcttgtttt tccaatgtgc ctcgcgcagc ggagctaaga
       61 ttggatttgt cgaaggcaaa gaaaacacga tcgccattaa caatcaaatc ttgggacgaa
      121 ccaggcgtaa ttgagaaacc tttgggtggg ccttttcttt tgcctttttt cttcgccatt
      181 atgcggtagt ccggcacttg tttcttcgcc atttgtttgc catcgcccga gcttttgccc
      241 gattccgtag atgtagactc gcaagccgca acaaggaaaa gcgctgctat cacaactgct
      301 aaatttctaa atttcatttt tttggtacct ctgatcggaa cgtttgttga aaaaaaccgc
      361 aaaccgcgac ctttcgcgtc ttgcactaag tcattattta gcacaatcat caaaaattac
      421 gacacaaaaa tgcatcaaat gactgaaaat cattgactta tagactataa gcatccccac
      481 ctacggaatc aagggtgacc atgcaggatc agaggcatcc attggcgtta ccatttcccg
      541 ttcattatat cccgttagat caatcgaata gagtttagag accttaccac cttttttgct
      601 aataggtgtt tcgcgaaaat acatgataac gcggccatta ggcgcccagg tcggcgattc
      661 gactaaaaat ccttcggcca gcaggcgttc gcctttgcca tcgatatcca tcacaccaat
      721 aaagaattta cctccagtga ttttggtaaa agcgatcaag tcaccccgcg gtgaccacac
      781 cggagtcgcg tagcggcccc ggccaaagct gattcgtttt gcccgcccac cattggcgcc
      841 catgacataa agctgctggg taccgctacg atccgagttg aagaccaccc gtttgccgtc
      901 tggcgaaaaa tgcggcgagg tgtcaatcgc tgaatgattg gtcaaacgct tctcggcgcg
      961 agtgcgcaaa tccatggtgt aaatttctgt attaccgtct ttcgccacac tcatgatgac
     1021 tttattgcca tctggcgaga agcgcggcgc aaaagtcata ccgggaaaat caccgagtaa
     1081 ttcctgccga ccggtatcta tattaaaaag gtaaactctc ggcactttgc catggtagga
     1141 catataagtt atttcctggc tgctcggtga gggtgagaaa cgcggcgtta agacaagcga
     1201 act
//
LOCUS       DASCNL010000264         3263 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000587361, whole genome shotgun sequence.
ACCESSION   DASCNL010000264 DASCNL010000000
VERSION     DASCNL010000264.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3263)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3263)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3263
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000587361"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(181..2097)
                     /locus_tag="QF359_03580"
     CDS             complement(181..2097)
                     /locus_tag="QF359_03580"
                     /inference="COORDINATES: protein motif:HMM:NF005714.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HJO86023.1"
                     /translation="MKALPRIANTTDIAAIEQIPLKERLKHANCFAAISAGLAIRPDH
                     AALHFLSAGDPAETPLTISHGELAKCGRRIANLLHVLGVNKGDPITVLMPNLPQKFMF
                     LIGCLPAAVFFPVNWMLEPQFLAEIIRAAGSKMLITLGPVPGYEIWGKVETILPDLPE
                     LEHILYVTPPGQEITPPTSTDRRIQSFDQLLASIENDVLEFELTVGWDDIAAYIHTGG
                     TTGNPKLARITHLGLLHEVTDLATMIGFQADDILFGGGVLFHIGALASDTLAPLSVGA
                     TVLVPSPLGFREPAVIENYWRIVEKFGITRMSGVVTSYSALLNQPSEGLDISTIRVSS
                     TGGMAMPEEIGHAVKRKTGVDIICTYGMTEVIGAATMAPRDGDPRYGSSGIPMPDFRV
                     RIASLDSDGNFIRDCVIDEIGNIIMSSPGIIPGYVDSSHDEALFVKNHEPGWVNSGDL
                     GRLDRDGYLWVTGRAKDVIIRSGHNIDPGIIEDALYKHAEVVSAAAVGKLDAYAGELP
                     VAYVQLSPESTVTEADLETFCRENILERAANPANIFIIDSLPLTGVGKISKLTLRHDA
                     TERVFAGLLVPLMVDENLEIAISVADDKRFGTTVTLAIADGYKAKRQVVESRITDVFS
                     PFTTHYEIIWPSEL"
     gene            complement(2094..>3263)
                     /locus_tag="QF359_03585"
     CDS             complement(2094..>3263)
                     /locus_tag="QF359_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014748084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJO86024.1"
                     /translation="VEGSGGGGSIKMVEDMGYSLLPGNLEMLSWLTKNLSMVPVMSLA
                     LGSVAGMGAGQIAASHYSLIIKDIGAMFVGGPPLVARLGEKVSREELGGSAIHTGNGV
                     IDDVVESEEEAFQKTRRFLSYLPSSVYELPERGDITDDSERRDEELIKIVPENHRRVF
                     NMRPIVGTVVDQGSFFEIGKNWARSLISGLARLDGWPVMVLANDSMHEAGAWTAQACR
                     KVARAVDLAQTFHLPIVYLVDCPGFAIGTKSEQEGTVREGMRAVAAIEQSTVPWCTIV
                     IRRAFGLAGAANSPADRLGHRYGWPSGNWGPLPIEGGIEAAYRAQLEAADDYGAELTK
                     IETRLDKIRSPYRTAEAFGIEEIIDPRDTRPLLCEFANTVAPLRTPGPPSFGVRP"
BASE COUNT          808 a          897 c          803 g          755 t
ORIGIN      
        1 ctcgttggac ccgcagcgtt catcttagtc gccaattccc tgacaagcgg catggcggtt
       61 tcacggaggc tgttcatttt ccaattaccc gcgatcaagg ggcgtcgttg agcactcatt
      121 ttgttttcct gtagttagcc gattacttgc cgattactta acatggcagg ttgggcctgg
      181 ctacagctcc gacggccata ttatctcgta atgtgtggtg aaggggctaa acacgtcagt
      241 aatgcgagat tccacgacct gccttttggc cttataacca tccgcaatag ccaaagtaac
      301 tgttgtacca aaacgtttat cgtcagctac tgaaatggct atttcaaggt tttcatctac
      361 catcagcggt accaacagcc cggcaaaaac ccgctcggtt gcatcgtgcc gtaaggtcaa
      421 cttggaaatc ttaccaacac cggtcaacgg taagctgtcg ataataaaaa tattggcggg
      481 attggcagca cgttcgagaa tattttctcg gcaaaaagtc tccaggtccg cttcggttac
      541 cgtcgactct ggactaagct ggacataggc tacgggtaat tctccggcat aggcgtccag
      601 cttgccaacg gccgccgctg agaccacttc ggcatgttta tacaatgcat cttcgataat
      661 accgggatca atattatggc cgctgcggat gataacgtcc ttggcccggc cggtaaccca
      721 gagatatcca tcccgatcca gacgtccgag atcgcccgaa ttaacccaac ctggctcatg
      781 gtttttaaca aacaacgctt cgtcatggct gctatcaaca tagcctggaa ttattcctgg
      841 gctggacatg attatgttgc cgatttcatc gattacgcag tctcttataa aattaccatc
      901 actgtccagg gaagcaatgc gaacccggaa atcgggcatg ggaataccgc ttgagccata
      961 gcgcggatca ccatcccggg gtgccatggt tgcagcgccg ataacttccg tcatgccgta
     1021 ggtacagatg atatcaacac cggttttacg cttcactgca tggccaattt cttccggcat
     1081 tgccatgccg ccggtcgagg aaactctgat agtactgatg tccaagcctt cgctcggctg
     1141 attaagtaaa gcactataag aggtcaccac gccggacatt cgcgtgatgc cgaatttctc
     1201 aacaatgcgc caataattct cgatcacggc gggctcacga aagcccaagg ggctgggcac
     1261 caacaccgtt gcgccaaccg acaatggggc aagcgtgtcg gaggctaagg caccgatgtg
     1321 aaacagcacc ccgccgccaa aaagaatatc atccgcctga aagccaatca tcgtcgccag
     1381 atcggtgact tcatgaagca gcccaaggtg agtaattctg gcgagctttg ggttgccggt
     1441 ggtgccgccg gtatgaatat aagcagcgat atcatcccag ccaacggtca gctcgaactc
     1501 taaaacatca ttttcaatgc tggctaaaag ctggtcaaag gactgaatgc gtcgatccgt
     1561 ggatgttggc ggggtaattt cctgtcctgg tggcgtcaca tagagaatgt gttctagttc
     1621 cggcaaatct ggtagtatag tttcgacttt tccccaaatc tcatagcccg gtacgggtcc
     1681 taaagtgatc aacatttttg atcccgctgc ccgtataatt tctgccagaa attgcggttc
     1741 cagcatccag ttaaccggaa aaaacacggc ggctggtaga cagccgatta gaaacatgaa
     1801 cttttgcggt aaattcggca tcaagaccgt gatgggatcg cctttgttga caccaagcac
     1861 atgtagcaga ttggcaatgc ggcggccgca cttcgctaac tcaccatggc ttatagtcaa
     1921 cggtgtctct gcgggatcac cggcagagag gaaatgcagc gccgcgtgat ctggcctaat
     1981 tgccaagccg gccgagatag ctgcaaaaca gttggcatgt ttaaggcgct ccttgagagg
     2041 aatttgttca attgccgcaa tatctgtggt gttagcgatc cgaggcaacg ccttcatggg
     2101 cgcacgccaa agctgggcgg gcccggcgtt cttagaggcg ccacggtatt ggcaaattcg
     2161 cagagcagcg gccgggtatc acgtggatct ataatttcct caataccaaa ggcttctgcc
     2221 gttcggtagg gcgagcgaat tttatcgagc cgggtctcga ttttcgtcaa ctcagcacca
     2281 taatcatctg cagcttcaag ctgagcccga taagcagctt caataccacc ttcgatcggc
     2341 agcgggcccc aattaccgga cggccagcca taacgatgac cgaggcgatc tgcggggcta
     2401 ttggcggccc cagccaaacc aaaggcgcgg cgaatgacaa ttgtgcacca gggcactgtt
     2461 gattgctcaa tcgccgccac cgcccgcatg ccttcccgca cggttccttc ttgctcagac
     2521 tttgtgccaa tggcaaatcc aggacaatcc actaaataaa cgataggcag atgaaatgtc
     2581 tgggcgagat cgacggcgcg ggctactttt cggcaggctt gagcagtcca ggctccggcc
     2641 tcatgcattg aatcattagc caacaccatc accggccagc catcaagccg cgccaggcct
     2701 gagatcaaag agcgcgccca atttttgccg atctcgaaaa aagagccttg atcaacaact
     2761 gtaccaacaa tcggccgcat attgaaaaca cggcggtgat tttcgggcac aattttgatc
     2821 aactcttcat cacgccgctc ggagtcgtcg gtaatgtctc cacgttccgg gagctcatac
     2881 actgaagatg gtaaatacga taaaaaccta cgtgtttttt gaaacgcttc ttcttcgctt
     2941 tcgactacat catcgataac gccgttgccg gtatggatgg cgctgccgcc aagttcttcg
     3001 cgacttactt tctcgccaag gcgcgcgacc aaaggtggcc caccaacaaa cattgcaccg
     3061 atatctttta ttatcagtga atagtgactg gccgcgatct gcccagcacc cataccggcg
     3121 accgatccca aagctaggga catcaccggc accatggaaa gattcttagt taaccaggac
     3181 aacatttcaa gattaccggg tagcagggaa tagcccatat cctcgaccat ttttatcgag
     3241 ccgccgccgc cactaccctc aac
//
LOCUS       DASCNL010000265         2107 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000590477, whole genome shotgun sequence.
ACCESSION   DASCNL010000265 DASCNL010000000
VERSION     DASCNL010000265.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000590477"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2084)
                     /locus_tag="QF359_03590"
     CDS             complement(<1..2084)
                     /locus_tag="QF359_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJO86025.1"
                     /translation="MFMQSNGGLTDAGRFRGKDSILSGPAGGVVGAVGTAAMAGFSKI
                     ISFDMGGTSTDVSHYAGEFERAFDTQIAGVRVRAPVMQIHTVAAGGGSILNFDGARFR
                     VGPDSAGAHPGPASYGKGGPLTVTDANVMLGRVQPEYFPHVFGANADAPLDARIVKEK
                     FAALAEDVGSTAEQVAEGFLKIATENMANAIKQISVQRGYDVTEYALTCFGGAGGQHA
                     CAVADALGMETIFIHILAGVLSAYGMGLAELRAFKERAVEQPFSEDSYPNLAAQLQDL
                     TAAASLELEAQDIAPADITISQKVHLRYQGTDTALEIPFGDFGELSKSFNELHRQRFG
                     FVDPGRALVVEALAVEVIGATEQLINQPIAITGQTEPDILDHVQVAFEGEARATAIFD
                     LETLQPSHHILGPAILIEANGTTVVEPGWQAEITSLGHLILTRAEPRPITYAIGTEAD
                     PIMLEVFNNLFMSIAEQMGAVLANTASSVNIKERLDFSCAVFDATGGLIANAPHMPVH
                     LGSMGESVRAIINARNKNGGETITPGEVYALNAPYNGGTHLPDVTVITPVFDDAGREL
                     LFFVGSRGHQADIGGITPGSMPPTSKTVEEEGVLIDNFLLVEKGTLREQALRELLGSG
                     AYPARNIEQNIADFKAQIAANEKGVQELNKTVAYFSLDVVNAYMGHVKDNAAESVRRV
                     LDQLPDGEFTNP"
BASE COUNT          490 a          606 c          547 g          464 t
ORIGIN      
        1 attggattgg taaattctcc atctggcaat tgatcaagca cccggcgcac actttcggcg
       61 gcgttgtctt tgacatgacc catataggcg ttgacgacgt cgagactgaa atacgcgacg
      121 gttttgttaa gctcctgcac gcctttttca ttggccgcta tttgggcttt aaagtcggca
      181 atgttttgtt caatgttccg cgccgggtac gcgcccgagc ccagcagctc acgtaacgcc
      241 tgctcccgta acgtgccctt ttcgaccaac aggaaattat cgatcaacac gccttcctct
      301 tcgacggttt tactagttgg cggcattgag cctggcgtga tgccgccgat atccgcctgg
      361 tgaccgcgcg agccaacaaa gaacaataac tctcggccag cgtcatcaaa gaccggtgtg
      421 attaccgtaa cgtccggcaa atgagtgcca ccattataag gcgcgttcag agcgtagact
      481 tcaccgggag taatcgtctc acccccattt ttatttctgg cattgataat cgccctaaca
      541 ctttcaccca tagagcccag atgcaccggc atgtgagggg cgttggcaat caagccgccg
      601 gtcgcatcaa acacggcgca ggaaaaatcc aaccgctctt tgatattgac cgagcttgcg
      661 gtattggcga gcaccgctcc catctgttcg gcaatcgaca taaaaagatt attaaaaact
      721 tcgagcatta tcgggtcagc ttcggtacca atggcgtaag tgatgggccg gggctcggcg
      781 cgggttaaaa tcagatgtcc gagagatgtt atctcggcct gccagccggg ctcgaccact
      841 gtggtaccat tggcttcgat taggatcgcc gggccgagga tatggtggct aggctgtaat
      901 gtctcgaggt caaaaatagc ggttgcccgt gcttcccctt cgaacgccac ttggacgtga
      961 tccaatatat ccggttcagt ttggccggtg atggcaatcg gttgattgat aagctgctcg
     1021 gtagcgccaa ttacttcaac cgccaaagct tcaactacca gcgcccggcc cggatcaacg
     1081 aagccaaagc gctgacgatg aagctcatta aatgatttgc tgagctcacc aaaatcgcca
     1141 aagggaattt caagcgctgt atcggtaccc tgataccgta aatgcacttt ttgagaaatc
     1201 gtgatatcgg caggagcaat atcctgagct tccaactcca ggctagccgc tgctgtcaaa
     1261 tcttgtaatt gcgccgcgag gttgggatag ctgtcttcgc taaacggctg ctcgacggcg
     1321 cgctccttaa aggcgcgaag ctcggccaga cccatgccat aggccgacaa caccccagcc
     1381 aggatatgga taaaaatagt ttccatgccg agcgcatcgg caacggcgca ggcgtgctga
     1441 ccaccggccc caccaaaaca cgttagtgca tattcggtga catcgtaacc ccgctgcaca
     1501 gagatttgtt tgatcgcgtt ggccatattt tcggtggcga ttttgagaaa accttcagca
     1561 acttgctctg cggtcgatcc tacatcttct gccagtgcgg caaatttctc tttaacaatt
     1621 ctcgcatcca ggggcgcatc ggcgttggcg ccaaagacat gagggaaata ttccggctgc
     1681 acccggccca gcatgacatt ggcgtcggtg acggtgagtg gaccgccctt accgtagctc
     1741 gccgggcccg gatgagcgcc cgccgaatca ggtccgaccc gaaaccgcgc gccatcaaaa
     1801 ttcaggatcg agccgccgcc tgccgcaaca gtatgaattt gcatgactgg cgcgcgcacc
     1861 cggacgccgg caatctgggt atcaaaggca cgctcaaact caccggcata atgggagaca
     1921 tcggtcgagg tgccacccat gtcaaagctg ataattttac taaagcccgc catcgccgcc
     1981 gtgccgacgg caccaacaac gccgcctgcc ggaccggaaa gaatactgtc tttaccgcga
     2041 aaccgtccgg catcggtgag cccgccattg gattgcatga acatgagctt ggcatcaccc
     2101 agctcgc
//
LOCUS       DASCNL010000266         1660 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000600622, whole genome shotgun sequence.
ACCESSION   DASCNL010000266 DASCNL010000000
VERSION     DASCNL010000266.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000600622"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="QF359_03595"
     CDS             <1..280
                     /locus_tag="QF359_03595"
                     /inference="COORDINATES: protein motif:HMM:NF015735.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HJO86026.1"
                     /translation="TIFCNDKPGVTDKRAAAMPGHVEYLEQSAIKNVMSGPLMDDAME
                     NVVGSLYVVDAPDRAAVEAFQKDDPLVQADIWESIEVHAFNKRVDNRD"
     gene            314..1099
                     /locus_tag="QF359_03600"
     CDS             314..1099
                     /locus_tag="QF359_03600"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86027.1"
                     /translation="MDLGLKEKNAAITGSSQGIGHAIASSLADEGCNVALSARNQDRL
                     DQAVGEMEAKGVNAIGIICDLSTEAGCGKFIEEAAVGLGGLDILVNNVGGMIPGTIGS
                     VDEATWDIILNTNLMSFVHTTKHAIPHIKKSSAGRILNVSGVTGKQLMPGALTTTIPN
                     TAIHGFAKIMAAELGPDNITVNTICPGFTNTESWGPRAEGMAKVKGITPDQVRDGVSG
                     MTLLGRWAEPQEIGDAAAWIVSEKNSYQTGTVVEVCGGYTKYI"
     gene            complement(1211..1537)
                     /locus_tag="QF359_03605"
                     /pseudo
     CDS             complement(1211..1537)
                     /locus_tag="QF359_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611857.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
     gene            complement(1438..>1660)
                     /locus_tag="QF359_03610"
     CDS             complement(1438..>1660)
                     /locus_tag="QF359_03610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86028.1"
                     /translation="GTTFCWMMDSKVADEASGIILALSEDTKLPHGIKFHLKMKIWPN
                     GWKVKELGMFAAHPIILRHKARSSDGIKL"
BASE COUNT          414 a          393 c          423 g          430 t
ORIGIN      
        1 tacaattttt tgcaacgata aaccgggcgt gaccgacaaa cgcgcggccg ccatgccggg
       61 acatgttgaa tatcttgaac aaagtgctat caaaaacgtt atgtccggcc cgttgatgga
      121 tgatgcgatg gagaatgtcg tcggcagcct ctatgtcgtc gatgcaccgg accgggcggc
      181 tgtcgaagcc tttcaaaaag acgaccctct ggtccaagcg gatatttggg agagcatcga
      241 ggtacacgcc tttaacaaac gcgtcgataa tcgggattaa tcaacttaaa gagattactt
      301 aggaggaact aaaatggatt taggacttaa agaaaaaaac gcggcgatta cgggctccag
      361 tcagggcatc ggccatgcca ttgccagctc acttgccgat gaaggctgta acgtcgcttt
      421 gtcagcccgt aatcaggatc gcctcgatca agcggttggg gaaatggaag ctaagggtgt
      481 aaatgcgatt ggcatcattt gcgatctttc gaccgaagca ggctgtggca agttcatcga
      541 agaagcggcg gttggcctcg gtggtcttga tattttagtt aacaatgtcg gtggcatgat
      601 tcccggaacc atcggtagtg ttgatgaagc aacttgggat atcattctca acaccaatct
      661 gatgtcgttt gttcacacca ccaagcacgc tatcccgcac attaagaaat ccagtgccgg
      721 acgtattctc aatgtctccg gtgtcactgg taagcagttg atgccgggcg ccctgaccac
      781 caccattccc aacacggcca ttcacggctt tgctaaaatt atggcggcag aattgggacc
      841 ggacaacatt accgtcaaca cgatctgccc gggcttcacc aatacggaga gctgggggcc
      901 gcgcgccgaa ggtatggcca aggtaaaagg cattacgccc gatcaagtgc gtgacggtgt
      961 ttccggcatg acgctgctgg gccgctgggc cgaaccacaa gaaattggtg acgccgccgc
     1021 ctggattgtt tcagagaaaa acagctacca gaccggcacc gtggttgaag tctgcggcgg
     1081 ttatacgaag tatatttaaa cgaaactcaa ttttaatcta aagggacact gtcccccgtc
     1141 tgttgtcaga gtttttggcc cagactttaa tttgatttaa tggagcctct gtctcatctg
     1201 gtttgtcata ttaagcggca tatttgcgat gacgcaagag cctggtttca attgtctttc
     1261 gtttgatcct ttctcgttgt tgtaaaatgg cctgtcctcg tccgaagtaa acatcagcag
     1321 gtgtaaagtt gttgatgctt tcgtgataac gctggtgatt ataatgattg acgaaggtgc
     1381 caatcttggc tctcaggtca tccgggaaga agtagttttt taaaaggatt ttattcttca
     1441 aagtttgatg ccatcactcg atcttgcctt gtgtctgagg attatagggt gcgccgcgaa
     1501 catgcccaat tcctttacct tccaaccatt cggccagatt ttcatcttca ggtgaaattt
     1561 aatgccgtgc ggcaatttag tgtcctctga cagtgccaag ataatacctg atgcctcatc
     1621 agcgactttg ctatccatca tccagcagaa ggtggttccc
//
LOCUS       DASCNL010000267         1259 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000601290, whole genome shotgun sequence.
ACCESSION   DASCNL010000267 DASCNL010000000
VERSION     DASCNL010000267.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1259)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1259)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000601290"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1061
                     /gene="dnaE2"
                     /locus_tag="QF359_03615"
     CDS             <1..1061
                     /gene="dnaE2"
                     /locus_tag="QF359_03615"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF025930.3"
                     /note="DNA polymerase involved in damage-induced
                     mutagenesis and translesion synthesis. It is not the major
                     replicative DNA polymerase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HJO86029.1"
                     /translation="ESHAASFALLVYVSSWLKCHYPAAFTAAILNSQPMGFYKPAQIV
                     RDAQDHGVEVRAVDVNDSEWDNTLEVIEQRGKIEEGWRAPDDQKTALRLGFRQIKGLK
                     QDAADNLVSAREDGYWQIELLKDRAGLKRGALEKLADADGFQSLGLDRRQALWAVKGL
                     SDANPLPLFAHLPEHRFRREPSVTLPNMSLGENVAADYKALRLSLKAHPMALLRDGFQ
                     PEQLLTCADLSTAEPGSMVRLAGVVLIRQRPGSAKGTIFITIEDETGIANLIIWPHKM
                     ERYRRIVIGSYLLGLEGKLQREGIVTHVVAEKLYDFSYRLSYLNSGDTGTRDTPSSPN
                     VKPESHAKKLVPGSRDFH"
BASE COUNT          307 a          351 c          324 g          277 t
ORIGIN      
        1 cggaatccca cgccgccagc ttcgccctgc tggtctatgt ctcgtcctgg ctcaaatgcc
       61 attatccggc ggcgtttacc gcagcgatcc tcaacagtca gccaatgggt ttttataagc
      121 cggcccagat cgtccgcgat gctcaagacc acggggtcga agtccgcgcc gtcgatgtca
      181 atgacagcga gtgggataat acgctggaag ttatcgaaca acgcgggaaa atagaagagg
      241 ggtggcgagc gccggatgat caaaaaacag cactgcgctt aggattccgc cagataaaag
      301 gacttaagca agacgccgcc gataatctgg tgtctgcccg cgaggatggt tattggcaaa
      361 tcgagttact aaaagaccgg gctggtctca aacgcggcgc gctggaaaaa ctcgccgatg
      421 ccgatggttt tcaatctttg ggtctcgacc gccgccaagc gctgtgggcg gttaaaggcc
      481 tcagcgatgc caatccccta cccttgtttg cccatttgcc ggagcatcgc tttcgccgtg
      541 agccttcagt gacgctgccg aatatgagct tgggtgagaa tgtcgcggct gattacaaag
      601 cactccgatt gtcgcttaaa gcccacccga tggcattatt acgggacggt tttcaacctg
      661 aacaactcct cacctgtgct gatctctcaa cagcagaacc cggcagcatg gtacgattgg
      721 ccggcgttgt cctgatccgt caacgtccag gcagcgccaa aggcaccatc tttataacca
      781 ttgaagatga gaccggcatc gccaatctga tcatctggcc ccataagatg gaacgctacc
      841 gccgtattgt catcggctct tatttgctgg gtcttgaagg caaactgcag cgggaaggta
      901 tagtcaccca tgtagtggcc gaaaagcttt atgatttctc ctaccggttg agctatctca
      961 atagcggtga cacgggaaca cgcgacaccc cctcctcacc caacgtcaaa cctgaaagcc
     1021 atgctaaaaa actggtgccc ggctcccgcg attttcatta atgctttctg ctagacaatc
     1081 tgctggaaag gcgcaaactc gaccacaaca acaataagac ctatcgggaa cccaccttga
     1141 acgaaacatc agaatcagaa gctactttca aatccagagc cgggcgagtg gcgtttcaac
     1201 atgctgatta ccgcgcattc tggctggcca gggtgctggg tgtttttgcc attgatatg
//
LOCUS       DASCNL010000268         3118 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000610091, whole genome shotgun sequence.
ACCESSION   DASCNL010000268 DASCNL010000000
VERSION     DASCNL010000268.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000610091"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..977
                     /locus_tag="QF359_03620"
     CDS             <1..977
                     /locus_tag="QF359_03620"
                     /inference="COORDINATES: protein motif:HMM:NF039581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJO86030.1"
                     /translation="YGQGGDEATNTDSQIVLGRIDPEYFLGGEMKVDGDLSFKAVQEK
                     VGDHYGWSVQEAAANTYMVALSALMMAMRIQTVSRGWDPREFAIVPYGGGGALYACDL
                     AREIGSTTVVVPPLPGYASAFGAIRVDVKHEFTTPIHQTEEELNFDELNKEIQNLVDK
                     SHAILAKEGIEEDMASVERFVDVKYFSQSRFFTVDLPDGELKSLDGIIKNFMDDMEAE
                     YGYSLPEGYAPVEVVNLRVVAKGEIIKPDLPEIEKGGKLATKATRQVWFKDHDFLEAD
                     IYERGELPPGAEFSGPAIIEQPDTTTVMPPGTHCTVDKYGNLVIKVDQ"
     gene            987..2930
                     /locus_tag="QF359_03625"
     CDS             987..2930
                     /locus_tag="QF359_03625"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO86031.1"
                     /translation="MAGKTEINVKEKLSNIEGLQMDLITFEVLRNAFVAACYEASTTI
                     ERIAYHPIIGMGRDRSNALLTEDARLVAHGHTDAAAHYASFEPSVQELFKDIPKDTMN
                     EGDTYIFSDPYRTGSHVNDVRMIRPIFYEGKIVAFSCTVIHWADMGGPMPGTFNPEAT
                     TCYAEGIRIPPIRLFKNNELDEELFSLIEINIRGAIERRADMKAQFEAARLIDRRVVE
                     LCEKYGVETLFQAFEEQFNYSERMMLTELESLPDGEWEFEDFGDQDVMAEGKPPIRVH
                     CKLTKVGSKLSFDWTDSDPQPKASWGGSRATLIGGNYLGFMICFPQLFPLNHGIIRNL
                     EIVSKPGTCVDVVFPAPTTGYCSGAFDKIEAVTIACLAGVMAKDQPWRVYPAAVSLTN
                     LCMGGYNPRTKKDFIQYTWAVGGENARTFKDGKSLIFMRFCNARTIPQELEERWFPVI
                     FDRYEARPDSCGHGFRRGGFGLIRELVIQTDIVMTIHGDREIHTPFGISGGLNGGGST
                     LIINKGTPDEFDAGMYATGVKLKKGDKIFYGSSGGGGFGDPLDREPELVLDDVIDEWL
                     TIEAAEEYYGVVIEEIDAEAADYRINEEKTKKAQAKLRKKGFKEGTGAFQINVLGKDI
                     KPERIPSEEEVRSHLAISRPPGW"
BASE COUNT          748 a          751 c          865 g          754 t
ORIGIN      
        1 gttacggtca gggtggtgat gaagccacca atactgatag ccagattgtt ttgggccgga
       61 ttgacccgga atacttcctc ggcggcgaaa tgaaggttga tggtgatctc tcgttcaaag
      121 ctgtgcagga gaaagtcggc gatcactatg gctggagtgt ccaggaagcg gccgccaaca
      181 cctacatggt ggcgctcagc gcgttgatga tggcgatgcg gatccaaacc gtgtcgcgag
      241 gctgggatcc gcgtgaattt gccatcgtgc cttatggcgg cggcggtgca ctatatgcct
      301 gtgatctggc tcgtgagatt ggttcaacca ctgttgtggt gccaccgtta ccgggctatg
      361 cctcagcctt cggcgctatt cgcgtcgatg tgaagcatga gttcacaacg ccgattcacc
      421 agaccgaaga agagttgaat tttgatgagc tcaacaaaga aattcaaaat ctcgtcgata
      481 aatctcacgc gattttggcc aaagagggca ttgaagagga catggcttcg gtcgagcggt
      541 ttgtcgatgt taaatacttc tcgcaaagcc gctttttcac ggtcgatctg ccggatggtg
      601 agctcaaaag tctcgacggt attatcaaga atttcatgga tgatatggaa gctgagtacg
      661 gttacagcct gccggaaggt tatgccccgg tagaagttgt caatttacgg gttgtcgcca
      721 aaggtgaaat catcaaacct gacctgccgg aaatcgaaaa aggcggtaaa ctggctacca
      781 aggcaactcg tcaggtctgg tttaaggatc atgatttcct tgaagctgat atttatgaac
      841 gtggtgagtt accgcctggg gctgaattca gtggcccggc gattattgaa cagccggata
      901 ccacaacagt gatgccgccc ggcactcatt gcacagttga taaatacggt aatcttgtca
      961 tcaaagtaga tcaataggag gctaacatgg ctggtaaaac agaaattaat gtaaaagaaa
     1021 agctatccaa cattgaaggt cttcagatgg atctgatcac tttcgaagtg ctgcgcaacg
     1081 cctttgtcgc cgcttgctac gaagcatcaa cgacgattga gcggattgcc tatcatccta
     1141 taatcggtat gggccgtgac cgctccaatg ccctgttgac cgaggatgcg cgtctggtgg
     1201 cgcacggtca taccgacgcg gccgctcact atgcgtcctt cgagccatcg gtgcaggaat
     1261 tgttcaaaga tattcccaag gatacgatga atgaagggga tacctatatt ttcagtgatc
     1321 cctatcgtac cggttcccac gtcaatgacg tgcgtatgat ccgcccgatt ttctatgaag
     1381 gtaagatcgt cgccttctcc tgcacggtta ttcactgggc ggatatgggt ggccctatgc
     1441 cgggcacctt caatccggaa gcaacgacct gctatgcgga gggtatacgc attccaccga
     1501 tccgtttgtt taaaaacaac gagctggatg aagaattatt cagcctgatc gagatcaata
     1561 tccgaggtgc aatcgaacgt cgggccgata tgaaggcgca attcgaagcc gcccgtttga
     1621 tcgaccgccg cgtcgttgaa ctttgcgaaa aatacggtgt ggagaccctt ttccaagcct
     1681 ttgaggaaca gttcaattac tccgaacgga tgatgttgac ggaactggaa tctctacccg
     1741 acggtgaatg ggagtttgaa gatttcggcg atcaggacgt catggccgaa ggcaaaccgc
     1801 ctattcgggt gcattgtaag ctgactaagg tcggctctaa gctatctttc gactggaccg
     1861 attccgatcc ccagccaaaa gcttcctggg gcggcagccg ggcgaccttg atcggtggca
     1921 actatcttgg tttcatgatt tgcttcccgc agttgttccc gcttaatcat ggtatcatcc
     1981 gcaatctgga aatcgtctcc aaaccgggca cctgcgtcga tgtagttttc ccggcgccga
     2041 cgaccggcta ttgctctggt gcttttgata aaatcgaagc tgtcaccatc gcctgcctag
     2101 ccggcgtgat ggctaaggat cagccgtggc gggtgtaccc tgccgcagtt agcctgacca
     2161 atctctgcat gggcggttat aaccccagga ccaagaaaga cttcatccaa tacacttggg
     2221 cggttggcgg cgagaatgcg cggaccttta aagacggtaa gtctttgatc tttatgcgtt
     2281 tttgtaatgc tcgaaccatt ccgcaggaac ttgaagaacg ctggttccca gtcatcttcg
     2341 accgctatga agccaggcct gatagttgcg ggcacggctt ccgacgtggt ggttttggcc
     2401 tgatccgcga attggtgatc caaactgaca tcgttatgac cattcatggt gaccgagaaa
     2461 tccatacccc gttcggcatc tccggcggcc tcaatggcgg cggctcaacc ttgattatta
     2521 ataaaggcac cccggatgag tttgacgccg gtatgtatgc gaccggtgtg aagctcaaaa
     2581 agggcgataa aatcttttat ggctcttccg gcggtggcgg ctttggcgat ccattggacc
     2641 gtgaaccgga actcgtttta gatgacgtta tcgacgaatg gctgaccatc gaggcggccg
     2701 aagaatatta tggtgtggtc attgaggaaa ttgatgcgga agcagccgat taccggatca
     2761 atgaggagaa gaccaagaag gcacaggcaa agctgcgcaa gaaaggcttc aaagaaggca
     2821 ccggtgcctt ccagatcaat gtgctcggca aggatatcaa gccggaacga attccgtcgg
     2881 aagaagaggt ccgctcccat ttggcaatct cccgtccacc gggctggtag ttcgattagc
     2941 tcatatccgc gatttcgttt gagcattgac tgaatgagga gagggcacgg tgtccgacga
     3001 gctgccaaaa gtttatgaaa ccgttgtgca tatgctggcc gcggctggag agaatgctgg
     3061 tgacgcttgt gctctgagtt ttgaggggcg ggatttaagc tatagccaat acctccgc
//
LOCUS       DASCNL010000269         1935 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000610737, whole genome shotgun sequence.
ACCESSION   DASCNL010000269 DASCNL010000000
VERSION     DASCNL010000269.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000610737"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="QF359_03630"
     CDS             complement(<1..355)
                     /locus_tag="QF359_03630"
                     /inference="COORDINATES: protein motif:HMM:NF013887.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HJO86032.1"
                     /translation="MPKYETLNVELGERSYDIHVGDGLLAEAGALIKPVIRSQRVIVV
                     TDKNVAPLYLASLESSLDAAGLNSESIILPAGEQTKSIDYFEQLFDQILAMKIDRQCA
                     LIALGGGVIGDLTGFA"
     gene            complement(355..933)
                     /locus_tag="QF359_03635"
     CDS             complement(355..933)
                     /locus_tag="QF359_03635"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HJO86033.1"
                     /translation="MDQEIVDLPDWLQGKFIVLVGLMGAGKTKLGRIIASSFGLPFLD
                     ADEEIELAAGCSIQEIFDCFGEKYFRDGERRVIQRILSEAPAVLSTGGGAFMNEETQA
                     EISKHGVAVWLRADLDLLVRRTERRSGRPLLNKGNGREILAGLIDERYPVYAKADFAV
                     DVSDEPASETAKRIMRELKNHPPANIPKEPNP"
     gene            1236..>1935
                     /locus_tag="QF359_03640"
     CDS             1236..>1935
                     /locus_tag="QF359_03640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86034.1"
                     /translation="MIDLKNRKLRKGVGISLAIVGSILSVEFGSTVSAQTTGQKPTSL
                     APAKVLTPEPAATQSPGQLQVNALQPQSLAPPPSAKVLVPLQINVEELKKIDSDSVGT
                     LTEEQGGFGINMWEGTSRNLVEKLFPKLPVNSSSRTMRSLMRRLLLSTAKAPVNADPL
                     DNQLASAQPDQMPVADPKVPKPEEGGKLLAMRIERLSAMGDVAAVDGLLKVAPNRDTD
                     HALLRSETDVLFFSN"
BASE COUNT          494 a          472 c          462 g          507 t
ORIGIN      
        1 ccgcaaaacc cgttaaatcg ccgataacgc cgccgcccag cgcaatcagc gcacattggc
       61 ggtcaatttt cattgctaga atttggtcaa aaagttgttc aaaataatcg atgcttttgg
      121 tttgttcacc ggccggcaga atgatgcttt ctgagtttag ccccgctgca tccaatgaac
      181 tctccaagct tgccaaataa agtggagcaa cgtttttatc agtcaccacg atgacgcgct
      241 ggctacggat gacaggtttg attaatgcgc cagcctcagc cagcagccca tcaccgacat
      301 ggatatcata gctgcgttca cccaactcga cattaagtgt ttcatattta ggcattaggg
      361 gtttggttcc tttgggatat ttgccggtgg gtgatttttt aactcccgca tgatcctttt
      421 ggccgtttcc gatgccggct cgtcactaac atcgacggca aaatccgctt tggcatatac
      481 cggataacgt tcatctatca aacctgcaag tatttcacgg ccgttgcctt tgttcagtaa
      541 tgggcggcca ctacgccgtt cggtacgccg caccaataga tcaagatcag cgcgcagcca
      601 cacggcaaca ccgtgtttac ttatttctgc ctgtgtctct tcgttcatga aggcgccgcc
      661 accggttgac aggaccgccg gcgcttcact taaaatgcgc tgaatgaccc ggcgttcgcc
      721 atcgcggaaa tatttttcac caaagcagtc aaagatttcc tggatcgaac agccggctgc
      781 aagctcaatt tcctcatcgg catctaaaaa cggcaggcca aaagaggacg caatgatgcg
      841 ccctaatttg gttttaccag cacccattag gccaacaagg actataaatt taccttgcaa
      901 ccagtcgggt aagtcgacta tttcttggtc cataagtgtt atttatcacg ttatttcgcg
      961 tttgggtgaa tttggggcct ttatttgccg aaaaattgcc atagtttgaa aatagtttat
     1021 tcctggaata cttctatagg gtggtaacaa ccactctaag caattaaaag tactaaaaat
     1081 taatgtgccg cgagtttacg gagcaattta ggcgatgaaa agtttgtcac gaataatggt
     1141 tttagtcgta gtgttgttaa ttgctggtac cgcaatattt ttatcaacct gggatatccc
     1201 ggctccgatt tccaaagtag aaaaagttat accgaatgat cgatttgaaa aatagaaaat
     1261 tacgcaaagg cgttggtatc tcgctggcga ttgtcggttc gatcttaagt gtagaatttg
     1321 gctcaacagt ttctgcgcaa acgacaggtc agaaaccgac atcgcttgcg ccggcaaagg
     1381 ttttaacgcc tgaaccagca gccacccaat caccggggca gttgcaggta aacgctctgc
     1441 aaccacaatc attggcgccg ccgccatcgg cgaaggtctt ggtgccgctt caaatcaatg
     1501 ttgaagagct gaagaaaatt gacagtgatt ctgtcggtac gcttaccgaa gagcaaggcg
     1561 ggtttggcat caatatgtgg gagggtacgt cccgcaatct ggttgaaaag ttatttccca
     1621 aattaccggt taattcgtca tcgcgcacga tgcggagttt gatgcgccgt ttactgttga
     1681 gcacagctaa agctccggtt aatgctgatc cgcttgataa tcaattggcc tccgcgcaac
     1741 ccgatcaaat gccggtggcc gatcccaaag tgccgaaacc ggaggaagga ggcaaactcc
     1801 tcgccatgcg gattgagcgc ttgtcagcga tgggtgacgt tgcggcggtc gatggcttat
     1861 taaaagtagc ccctaatcgg gataccgatc acgccctatt gcgcagcgaa accgatgtgc
     1921 tgtttttttc gaacg
//
LOCUS       DASCNL010000270         3044 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000612652, whole genome shotgun sequence.
ACCESSION   DASCNL010000270 DASCNL010000000
VERSION     DASCNL010000270.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3044)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3044)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3044
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000612652"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1390)
                     /locus_tag="QF359_03645"
     CDS             complement(<1..1390)
                     /locus_tag="QF359_03645"
                     /inference="COORDINATES: protein motif:HMM:NF013646.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HJO86035.1"
                     /translation="MSKRLQVLIVGGGPVGMGLAIELGLRGISSAIVERRTEPHRIPK
                     GQNLMQRTLDHFDSWGIIKEIRGARVMPPESPIGGIITYGDLMSEYWYSPPQREVVKD
                     FFFQANERIPQYCLEEVLQNKLNDLPNVETYFGWQAETLAQDDTSVTLNLTEVDGPGQ
                     QTLEADYLVGCDGAHSMVRDTIGIERKGSDFDQKMVLAVFRSKELHKGLKRFPERSTY
                     RAMDPELNGYWQFFGRIDVGEGWFFHAPVPMDTTTGNYDFKALIQKAAGFEFACEFDH
                     VGFWDLRVAAAETYQVDRVFIAGDAAHSHPPYGGFGVNNGLEDARNLGWKLAARIQGW
                     SGEALLNSYSQERHPIFKETGEDFIAARIKREGKFFQIYSPKKNLDTFLEAWEKKQAG
                     AAGDVLSYEPNYEGSDVIEGPTGGVCSAHGKHTFMAQAGHHLAPLELSSGKNIYEEIS
                     NDFTLLALDGEDA"
     gene            complement(1406..2161)
                     /locus_tag="QF359_03650"
     CDS             complement(1406..2161)
                     /locus_tag="QF359_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014748328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO86036.1"
                     /translation="MPYQFYYWPMIQGRGEIVRLALEEAGAEYVDVARQKNTTASEDS
                     GQEDNRAAILEILQDSSQTRPPFAPPFLVDGDVMVAQAANILNYLAPKIGLAPASKAD
                     QLFAHQIQLTVTDFLMEVHDTHHPIANALYYEDQIEEAKKRAGNFIEHRIPKHMGYYE
                     QIIANNPSAFSWLIGDALTYPDLSLFQIVEGLRYAFPKAFAKLEGNYPHMTALHDAVA
                     TRPNTAAYLASERRIPFNSMGVFRHYPELDSES"
     gene            complement(2182..2790)
                     /locus_tag="QF359_03655"
     CDS             complement(2182..2790)
                     /locus_tag="QF359_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590588.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HJO86037.1"
                     /translation="MNPWIDVVEYDDADGCLKSLYDKVKGPDNNVDNIMMIHSLRPHT
                     MEAHMTIYKYVIHHSANQVPKWFLETLGVYVSHLNNCHYCVEHHFAGLTRLLDNEELS
                     TAIRAALETDQFDGVFSDKEAAALRYARALTKDITDMPEQLVKDMRGAGYDDGEILEI
                     NQLVAYFAYANRTVVGLGCSTEGDILGLSPNDSDDPDNWSHS"
     gene            complement(2802..>3044)
                     /locus_tag="QF359_03660"
     CDS             complement(2802..>3044)
                     /locus_tag="QF359_03660"
                     /inference="COORDINATES: protein motif:HMM:NF012787.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HJO86038.1"
                     /translation="VSFDPNADNKAFKDKFNFPYDLLTDGDRVASTAYGVVTSDTGNA
                     SRVSVLVAPDGTVAKAYETVTPAEHPDQVLADLATL"
BASE COUNT          692 a          792 c          813 g          747 t
ORIGIN      
        1 ctgcgtcttc gccgtctaaa gccagcagtg taaaatcatt actgatctct tcatagatgt
       61 ttttgcctga ggacagctca agcggtgcca gatggtggcc ggcttgggcc ataaaagtgt
      121 gcttgccgtg ggccgagcaa acaccgcctg taggaccttc aatgacgtcg gagccttcat
      181 agttcggctc atagctcagc acatcccctg ccgctcccgc ctgttttttc tcccaagctt
      241 cgaggaaagt gtctaaattt tttttgggac tatagatttg aaaaaacttg ccttcccgct
      301 taatgcgggc agcgataaaa tcctcaccgg tttccttgaa gattgggtgg cgctcttggc
      361 tgtaggaatt gaggagcgcc tcgccgctcc agccttggat acgggccgca agcttccagc
      421 cgagattgcg cgcatcttcg agcccgttat tgacgccaaa gccgccatag ggtgggtgcg
      481 agtgagcggc atcaccggca ataaaaaccc ggtcgacttg ataggtttcg gcggcggcga
      541 cgcgtaaatc ccaaaagccg acatgatcaa actcgcatgc aaactcaaag ccggcggctt
      601 tctggatcaa ggctttgaaa tcgtagttgc cggtggtggt gtccattggt accggggcat
      661 ggaaaaacca accctcgccg acatcgattc ggccaaagaa ctgccaatag ccgttgagtt
      721 ctgggtccat cgcccggtag gtgctgcgtt cggggaagcg cttgagacct ttatgcaatt
      781 ccttggagcg aaaaacggcc agcaccatct tttgatcaaa gtccgagcct ttacgctcaa
      841 tgccgatggt gtcccgcacc atcgaatggg cgccatcaca accgactaga taatcggcct
      901 cgagggtttg ttgcccagga ccatctactt cggtcaaatt taaagtgacg ctggtgtcgt
      961 cctgcgccaa tgtctctgct tgccagccga aataggtttc gacattgggc aagtcattga
     1021 gtttattctg caacacttcc tccaggcaat attgcggtat ccgttcattg gcttggaaga
     1081 aaaagtcttt gacgacttcg cgctggggtg gggaatacca atactcgctc atcagatcgc
     1141 cataagtgat gatgccacca attgggctct ccggtggcat aacgcgggct ccgcgtattt
     1201 ctttaataat gccccagctg tcaaaatgat cgagggtacg ctgcattaaa ttctgaccct
     1261 tggggatgcg gtgaggctcg gtgcggcgct cgacgatggc agaagaaata ccacgcaaac
     1321 cgagctcaat ggcgagaccc ataccgaccg gtccgccgcc aacaatcaaa acctgaaggc
     1381 gtttgctcat tgtgttccct tttagttatg actcgctatc caactccgga taatggcgga
     1441 acacacccat ggaattaaat ggaatgcggc gctccgaagc caaataggcc gccgtatttg
     1501 gccgtgtcgc taccgcgtca tggagtgcgg tcatatgcgg ataattacct tcgagcttag
     1561 caaaggcctt ggggaatgca tagcggaggc cttccacgat ctggaataac gacagatcgg
     1621 gataggtgag agcatcaccg atcagccagc tgaacgcgct tggattattg gcgataatct
     1681 gttcgtaata gcccatatgt ttggggatac ggtgctcaat gaaattgccg gcgcgttttt
     1741 tagcctcttc gatctgatct tcgtaataga gcgcgttggc aattggatgg tgggtgtcgt
     1801 gcacctccat taagaaatcc gtgacggtga gctgaatttg atgggcgaac aactgatccg
     1861 ctttgctggc tggtgccaga ccgattttgg gcgccagata gttcaggata ttggcggctt
     1921 gcgccaccat cacgtcgcca tcgaccagaa acggtggcgc gaatggtggc cgggtctgac
     1981 tgctatcttg caggatttcc aggatcgctg cccggttgtc ttcctgcccg gaatcttctg
     2041 atgccgtcgt atttttttgg cgggcaacat caacatattc cgcgccggct tcttcgaggg
     2101 ccaaccgcac gatctcaccc cgtccctgga tcatcggcca gtaatagaat tgataaggca
     2161 tggtagtact ctcctattca actaactatg cgaccagttg tcggggtcgt cggaatcatt
     2221 gggtgagagg ccgaggatat caccctcggt cgagcagcca aggcccacga ctgtgcggtt
     2281 ggcataggcg aaataggcga cgagttggtt gatctctaga atttcgccat cgtcatagcc
     2341 ggcgccccgc atatctttaa ccaactgctc gggcatatcg gtgatgtctt tggtcagcgc
     2401 ccgggcatat cttagtgccg ccgcttcctt gtccgaaaat acaccatcga actgatcggt
     2461 ttcaagtgct gcccgaatgg ctgtcgagag ttcttcatta tccagcagcc gcgtcagtcc
     2521 ggcaaaatga tgttcgacac aatagtgaca attgttgaga tgactgacat agacgccgag
     2581 ggtttccaga aaccattttg gcacctgatt ggccgaatga tggatgacat atttatagat
     2641 tgtcatatga gcctccatcg tatgcgggcg gaggctgtga atcatcataa tattgtcgac
     2701 attattgtcg gggcctttca ccttgtcata aagcgacttc aggcagccat cagcatcgtc
     2761 gtactcgacg acgtcaatcc aggggttcat gtgttcttcc tttaaagtgt ggccaaatcg
     2821 gcaagaacct gatccggatg ttcagccggg gtcacggtct cgtaagcctt ggcaactgtg
     2881 ccatccggtg caaccagtac cgaaacccgg ctggcattac cagtatccga cgtaacgaca
     2941 ccgtaagctg ttgaggccac acgatcccca tcggtcagca gatcgtaggg aaagttgaac
     3001 ttatccttaa aggctttgtt atcagcgttg ggatcgaaac tcac
//
LOCUS       DASCNL010000271         1256 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000614281, whole genome shotgun sequence.
ACCESSION   DASCNL010000271 DASCNL010000000
VERSION     DASCNL010000271.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000614281"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /gene="purN"
                     /locus_tag="QF359_03665"
     CDS             <1..426
                     /gene="purN"
                     /locus_tag="QF359_03665"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HJO86039.1"
                     /translation="HDALSEAGVKLVCLAGFMRILTDGFVSRWLDKMINIHPSLLPSF
                     KGLHTHERAIEAGVRFSGCTIHFVRPEMDDGPIIAQATVPIRQDDTPDALAARVLVEE
                     HKIYPLAVRMIAEGRISITGSQVTIKGAVNPDSAVINPA"
     gene            522..977
                     /locus_tag="QF359_03670"
     CDS             522..977
                     /locus_tag="QF359_03670"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HJO86040.1"
                     /translation="MTDIAFYHLQRSNLEDALPKLLERTLAAGKRALVRAGSTERVEA
                     LNAILWTHGKDSWLPHGSAKDGYAEDQPIWLSTDNDNPNGASFIFLTDNIVATDLDQF
                     ERCFDLFDGNDDASITAARTRWKELSEAGHELHYWQQNEQGKWVEKAES"
     gene            complement(986..>1256)
                     /locus_tag="QF359_03675"
     CDS             complement(986..>1256)
                     /locus_tag="QF359_03675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86041.1"
                     /translation="YLLGTNEPYIISPEHLNYLNGRNLRKLMSKHGLNVEKIEWTLKV
                     LPLAIGKLPFGGIAIPVLKPLIGILLKLIDTLHLGIFVTVYARKI"
BASE COUNT          333 a          306 c          300 g          317 t
ORIGIN      
        1 catgacgcgc tctctgaggc cggtgttaaa cttgtatgtc tcgcgggctt catgcggata
       61 ctaacagatg gttttgtcag tcgttggctg gataaaatga tcaacattca cccgtcgctc
      121 ttgccgtcat ttaaggggct tcatacccac gagcgagcaa tcgaggccgg cgtgcgtttt
      181 tccggatgca ccattcactt tgtccgaccg gaaatggatg atggtccgat tatcgcccaa
      241 gctaccgtac ccatccgcca ggatgacacg ccggatgctc tcgccgcccg ggttttggtc
      301 gaggaacaca agatttatcc cttagcggtg agaatgatcg ccgaaggccg aatatctatc
      361 accgggtctc aagtcacaat aaaaggtgct gtcaatcccg acagcgcagt aattaatccg
      421 gcctgacatc acggtcatgc tggccgacga taaactgtgc cacaccgcta acgctggcag
      481 tattttgaca gccactcgta agatacataa aatccatcat catgaccgac atcgcgtttt
      541 atcatctaca acgttccaat ctggaagatg ctttaccgaa gctgttggag cgcacactgg
      601 cagcgggcaa acgcgctttg gttcgggccg gctccaccga gcgggtcgaa gcgctcaatg
      661 caattctttg gacccatggt aaagatagtt ggctgcccca cggcagcgct aaagatggtt
      721 atgcggaaga tcaaccgatc tggctctcaa ccgacaacga taatccaaac ggtgccagtt
      781 ttattttttt aaccgataat attgtggcga ccgaccttga tcagttcgag cgctgctttg
      841 atttgtttga tggcaatgat gatgcttcta ttacggcggc acggacccgc tggaaagagc
      901 tttcagaggc tggccatgaa ctgcattact ggcaacaaaa tgaacaagga aagtgggtcg
      961 agaaagcgga gtcttaaaca accagttaga ttttcctagc atagacagtg acgaaaatac
     1021 caaggtgcaa agtgtcaatt aactttaata aaatgccaat aagtggcttt aacaccggta
     1081 ttgcgatccc accaaatggc agtttgccga tggctaacgg tagcaccttt aaagtccatt
     1141 cgattttttc aacgttcaga ccatgttttg acataagttt tcgcaaatta cggccattta
     1201 aataattcaa atgctccggt gaaataatat agggttcgtt tgtacccagt aaatat
//
LOCUS       DASCNL010000272         2794 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000615025, whole genome shotgun sequence.
ACCESSION   DASCNL010000272 DASCNL010000000
VERSION     DASCNL010000272.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000615025"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="QF359_03680"
     CDS             complement(<1..225)
                     /locus_tag="QF359_03680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HJO86042.1"
                     /translation="MTVENIARDTPLIGPDDPEPFELLNPESGLPVLLICDHASKTVP
                     QEMANLGLDEATMDLHVGWDIGAAEVVRQLA"
     gene            complement(615..690)
                     /locus_tag="QF359_03685"
     tRNA            complement(615..690)
                     /locus_tag="QF359_03685"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(655..657),aa:Lys,seq:ttt)
     gene            complement(825..1319)
                     /gene="coaD"
                     /locus_tag="QF359_03690"
     CDS             complement(825..1319)
                     /gene="coaD"
                     /locus_tag="QF359_03690"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HJO86043.1"
                     /translation="MPRTGIYPGTFDPVTNGHIDIISRATRVVDQLIIGVAINAGKGP
                     LFSLEERVAMVEYEISKLPDGAGECVSVKPFEGLLTDLAVSHDASLIVRGLRAVSDFE
                     YEFQMTGMNRRLNSEVETVFLTASEKHQFISSALVKEICSMGGDISHFVTSNVRERLL
                     EKFF"
     gene            complement(1348..>2794)
                     /locus_tag="QF359_03695"
     CDS             complement(1348..>2794)
                     /locus_tag="QF359_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HJO86044.1"
                     /translation="GKYKLSAEQAKAILEMRLQRLTGLERDKIATDLKELCAKIKEYL
                     KILGDKELLFEILVSELLRMKELFGNERRTTIEDAEFEGDIEDLIQREDMVVTVSDSG
                     YIKRVPLSTYRAQNRGGKGRAGMSTKDEDFVSQVFVANTHQPMLFFSSTGIVYKLKVY
                     KLPQGTPQARGKALINVLPLDEGETITTVMALPEDEESWGDLFVMFATASGGVRRNKL
                     SDFTNVNANGKIAMKLDEGDHLVRVRVFEEDHNVFLATRKGKCIRFPVSDVRVFASRN
                     STGVRGIKLAGGDEVIAMSGLKHIKVEVAERDEYLKSVNASRRLVGGDYTDRDEDKTN
                     DEAMAAQLEQELHQEMAAEEEFILTVSEDGFGKRSSAYGYRISKRGGKGIDSMGVKRG
                     KELTQVIATLPVMDTDQLVMVSDGGQLIRLPVDNISFTGRASRGVTLFNVAEEERVVS
                     VTRFRDVEGDENAEEVETVENPTDTPLDNEE"
BASE COUNT          700 a          737 c          657 g          700 t
ORIGIN      
        1 cgccaactgc cggaccacct cggctgcgcc aatatcccag ccgacatgca aatccatggt
       61 cgcttcatca aggccgaggt tagccatctc ctgcggcact gtcttgctgg catggtcgca
      121 gatcagcaac accggtaatc cggactcggg attaagcagc tcaaatggtt cgggatcatc
      181 cgggccgatc aacggtgtat ctctcgcgat gttttctacg gtcatggcga aaatatagag
      241 aatttagagg ctggataaag cgctttgtct ccacagcata tttcggtgat agtttacttt
      301 ttaaatattc gcaaagcagt accagctaaa agtaaactgt caccgaaata ctgttaaata
      361 tatttatgcg ggttgatcca gataggtgat cacgtacccg gaaggtatcc caagccagtc
      421 tttggccttt tcctagtcac gaaatggagc gtcatcaaaa ggggccaagg tgcgacaaaa
      481 tttttgaaag attattattg gtaaatgtcc gctttggata gtggtcatat gcggacataa
      541 aacgccttag ctaaaagagt tctctatcga gggtaaaaca aatattgaga gaggcaattt
      601 ctaaagtgaa aaaatggtag gcacgacagg attcgaacct gtgaccgtcc gcttaaaagg
      661 cggatgctct accgactgag ctacgtgccc ccaaaatttg accagaagag tcaaaacgct
      721 gtctcaatgg gaactgacaa cgattcacgc ggcgcaacat aagcaggcgg acttgcttgg
      781 tcaatactag attttgctaa aatctctata cccaagactg attatcagaa aaatttttcg
      841 agcagccttt ctctgacgtt cgaggtaaca aaatggctaa tatcgccacc catgctgcaa
      901 atttccttga ccagagccga ggaaataaac tgatgttttt ctgatgcggt aagaaatacc
      961 gtttcaactt ccgaattgag gcgccggttc atacctgtca tttgaaactc atattcaaag
     1021 tcggaaaccg cgcgtaaacc acgcacaatc agcgaggcat cgtgggacac cgcaagatcg
     1081 gtcagcaacc cttcaaaagg cttaacactc acacactcac ccgcaccatc gggcagtttg
     1141 gatatctcgt actcgaccat ggcaacgcgt tcctccaatg aaaacaacgg cccttttccg
     1201 gcattgatag caacaccaat gatcagctgg tcgaccacgc gggtggcacg ggaaataata
     1261 tcaatatggc cattggttac gggatcgaat gtaccggggt agataccagt gcgcggcatt
     1321 ggaagtcctt tatattaatt attccaacta ttcttcgtta tccaggggag tatctgttgg
     1381 attttcaaca gtttcaacct cttctgcatt ttcatcacct tcaacatcgc ggaagcgggt
     1441 gaccgagacg acccgctctt cttcagctac attaaataac gtcacgccac gcgatgcccg
     1501 gccggtaaag ctgatgttgt cgactggcag gcggataagc tgaccgccgt cagaaaccat
     1561 caccagttga tccgtatcca tcactggtaa ggtcgcaatc acctgggtta gttccttgcc
     1621 gcgtttgacg cccatgctgt cgataccttt gccgccgcgc tttgatatac ggtagccata
     1681 agctgatgac cgcttgccaa agccatcttc agagacggta agaataaact cttcttccgc
     1741 cgccatttcc tggtgcaact cctgttcgag ctgggctgcc atggcttcgt cattggtctt
     1801 gtcctcgtca cggtcggtat aatcgccgcc gaccagccgc cgtgacgcgt taaccgattt
     1861 cagatactca tcgcgctcgg caacttcgac cttgatatgt ttaaggccgg acatggcaat
     1921 cacttcatca cctccggcca gtttaatgcc gcgcacacca gtagagttgc ggctagcgaa
     1981 aacgcggaca tcgctgaccg gaaagcggat acatttacct ttacgggttg ccaggaacac
     2041 attgtggtct tcttcaaaga cccggacccg caccaaatga tcaccttcgt cgagcttcat
     2101 ggcgattttg ccattggcat tcacattggt gaagtcagag agcttgttcc gcctgacccc
     2161 gccggaagcc gtcgcgaaca taacaaagag atcaccccag gactcctcgt cttctggtag
     2221 cgccatcacc gttgtaatgg tttcgccttc atctagcggc agcacattga tcagtgcctt
     2281 accgcgggcc tgcggcgtgc cttgtggcaa tttgtagacc ttgagcttat agacaatacc
     2341 ggtcgatgaa aaaaacaaca tcggctgatg ggtattggca acaaacacct gactgacaaa
     2401 atcttcatct ttggtgctca tgccggcccg gcccttaccg ccccggttct gcgcccggta
     2461 agtcgagagc ggcacccgtt tgatgtaacc gctgtcactg acggtgacga ccatgtcttc
     2521 gcgttggatc agatcttcga tatcgccttc aaattcagca tcttcgatcg tggtccggcg
     2581 ttcgttgcca aacagctctt tcatccgcag taattcgctg accagaatct cgaacagcaa
     2641 ttccttgtcg ccaagaattt tgagatattc cttgatcttg gcgcaaagtt ctttgagatc
     2701 ggtggcaatt ttatcccgct ccagcccggt taaacgctgc aggcgcattt cgagaatggc
     2761 tttggcctgt tcggctgaga gtttgtattt gccg
//
LOCUS       DASCNL010000273         1221 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000615658, whole genome shotgun sequence.
ACCESSION   DASCNL010000273 DASCNL010000000
VERSION     DASCNL010000273.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1221)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1221)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000615658"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="QF359_03700"
     CDS             complement(<1..607)
                     /locus_tag="QF359_03700"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HJO86045.1"
                     /translation="MVKNNSTIKTIGVLTSGGDCAGLNAVIRAVTHRAIEGYGWRVLG
                     IYDGTQGLMDSPPRYEELTLKLFTGNILRMGGTILGTTNKGDPFDFPMPDGSRKNRSK
                     EFAEGFKELELEGLIGIGGDGSLDILNRLTKLGDINFIGVPKTIDNDVPLTEFSVGFS
                     TAVNTAVEALDRLQPTAASHERVMILEVMGRDAGHIALNAGI"
     gene            699..899
                     /locus_tag="QF359_03705"
     CDS             699..899
                     /locus_tag="QF359_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HJO86046.1"
                     /translation="MTDNLEIENRIKELKDQHRQLDAEIEQLAGEPDFDQIKLQRLKK
                     EKLALKDQISKIEAGEVPDIIA"
     gene            complement(940..1197)
                     /locus_tag="QF359_03710"
     CDS             complement(940..1197)
                     /locus_tag="QF359_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86047.1"
                     /translation="MRDSNLIHAAGVIRSCLNEVDVFGALDYGEFGVILNFYQEEAVT
                     AKVVAMNELLSHTSFVMAEQGYPIAIVWGSKELWQMASQTN"
BASE COUNT          340 a          323 c          253 g          305 t
ORIGIN      
        1 caataccagc attgagcgca atgtgccccg catcccggcc catcacttcc aaaatcataa
       61 cccgctcatg gctggcagcc gttggctgca ggcgatcaag cgcctcaacg gcggtattca
      121 cagcagttga aaaaccgacg gaaaattcgg ttaacggcac atcattgtcg atggttttag
      181 ggacgccgat aaagttgatg tcacccagtt tggttaaacg atttagaata tcgaggctgc
      241 catcaccgcc gatgccgatc aaaccttcga gttccaattc cttaaaacct tcggcaaact
      301 ccttcgagcg attttttcta ctaccatccg gcatcggaaa atcaaatgga tcgcctttgt
      361 ttgtcgttcc taaaatggtg ccacccatac gcaaaatatt gccggtaaac agtttaagcg
      421 taagttcttc gtatcttggt gggctatcca tcaacccttg cgtgccatca tagatgccaa
      481 gaacacgcca gccatacccc tcaatcgccc ggtgggtgac ggctcggata accgcattta
      541 agccggcaca atcaccgccg ctggtgagca caccgatggt tttaattgtt gaattatttt
      601 taaccactct aatattccga aattaattaa aatcaattgt ccaaacacgc gatatttttg
      661 gtattatact atctgggtca attaaatcga aacgacgtat gactgacaac ctagaaatcg
      721 aaaaccggat taaggagctg aaggatcagc accgccaact cgatgccgaa attgagcagc
      781 ttgcgggtga gccggatttc gaccaaatca agctgcaacg gctcaagaaa gagaagttgg
      841 cgttaaaaga tcaaatcagc aaaatcgagg caggtgaagt accagatatc atcgcctaag
      901 cgggctgact cgatcttgct ttttcgcttg ccgttaggat caattggtct ggctggccat
      961 ttgccataat tcctttgatc cccaaactat ggcaatcgga tacccttgct ccgccatgac
     1021 aaaagacgtg tggctcaaca gctcgttcat tgccactacc ttggccgtta ctgcttcttc
     1081 ctggtagaaa tttaatatca ccccaaattc gccgtaatcc aaggccccaa acacatctac
     1141 ttcattgaga caacttctga taacgcccgc cgcatgaata agattactat ctctcaaact
     1201 agcgccttga cgctaccata g
//
LOCUS       DASCNL010000274         1130 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000617010, whole genome shotgun sequence.
ACCESSION   DASCNL010000274 DASCNL010000000
VERSION     DASCNL010000274.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1130)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1130)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000617010"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            253..>1130
                     /locus_tag="QF359_03715"
     CDS             253..>1130
                     /locus_tag="QF359_03715"
                     /inference="COORDINATES: protein motif:HMM:NF012951.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HJO86048.1"
                     /translation="MSPSNTPVDSENTTADDSAPRDFIRDIVYDDLGAGRYPLVVTRF
                     PPEPNGYLHIGHAKSICLNFGIAEDFSGRCHLRFDDTNPTKEEQEYIDAIQEDVRWLG
                     FDWGEHLYYTSDYFEQLYDWAEHLINQGLAYVDDLTADEIREHRGTLTEPGTNSPYRD
                     RTVDENLDLFRRMRAGEFENGAKVLRAKIDMASGNINLRDPVIYRIMHAELPRTGSAW
                     CIYPNYDFAHGQSDAIENITHSICTLEFEDHRPLYDWLIKNLPVPSEPRQYEFARLNL
                     TYTVLSKRRLMQLVSNG"
BASE COUNT          288 a          286 c          269 g          287 t
ORIGIN      
        1 gggtatcgct tgaaggctcg gcgatggtgc ggcgcaacga tctgaactta gaatattacg
       61 gcggtgaagt tgaaccgcgc gccattctca tcgattttac ccatcggaat ccgcaagccg
      121 atgagctgcg acgcagtcta ggatttcaac agtaatcatc aaagcttggc ctgcatgctt
      181 ttttttggca cataaggaat aaatttcgcc aaaataattc ctaacttaat tttgaaattg
      241 gtcagcgtcg caatgagccc atcaaataca cctgtcgaca gcgaaaatac gacagcagac
      301 gacagcgcac cccgcgattt tattcgcgat atcgtttatg atgatttagg cgcgggacgt
      361 tatcccctag ttgttacccg ctttccaccg gagcccaacg gctatctgca tatcggtcac
      421 gctaaatcaa tctgcttgaa tttcggtatc gccgaggact ttagcggtcg gtgccatctg
      481 cgctttgacg acactaatcc aaccaaggaa gaacaggaat acatcgacgc aattcaagaa
      541 gatgtgcgct ggctcgggtt cgattggggt gagcaccttt attatacgtc tgattatttc
      601 gaacagctgt atgattgggc agagcatttg atcaatcaag ggctcgctta tgtcgatgac
      661 ctcaccgcgg atgaaattcg tgagcaccgt ggaactttga cggagcccgg caccaatagc
      721 ccgtaccgcg accgcacggt cgacgaaaat cttgatttat tccgccgtat gcgagctggc
      781 gaattcgaga atggcgcaaa agttttgcga gccaaaatcg atatggcatc cggcaatatt
      841 aatttgcgtg atccggtgat ttatcgcatc atgcatgccg agctcccgcg tacgggatca
      901 gcttggtgta tctatcccaa ttacgatttc gcccatggcc aatcagatgc aatcgaaaac
      961 atcacccatt cgatttgcac cttggagttt gaagaccatc gcccgcttta tgattggctg
     1021 attaaaaatc tgccggtgcc ttcagagcct cgtcaatatg aatttgcccg gctcaacctg
     1081 acctacacag ttttatcaaa gcgccgcctc atgcaattgg tcagcaacgg
//
LOCUS       DASCNL010000275         5461 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000622045, whole genome shotgun sequence.
ACCESSION   DASCNL010000275 DASCNL010000000
VERSION     DASCNL010000275.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5461)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5461)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5461
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000622045"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="QF359_03720"
     CDS             <1..705
                     /locus_tag="QF359_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO86049.1"
                     /translation="GEAAVQAGKALRQNIVEVAGIMLQSDPSTLDIRDNKIVDLADGK
                     ERIELSEVGRVCYYRPDTLPKDYQSELVVTRHYVPKQFPFAFTNGVQGCYLEVDTNTG
                     FIDFKKFCVVEDCGTVINPQLVDEQVRGGVIQGLGGALLEECLYSPEGQLLNGTMADY
                     LVPMAVEMPDIVVGHVESPTLDSELGAKGAGEAGTGGAPAVVMNAINDALNPLGGKVT
                     VQPFTPERILQAIGKI"
     gene            complement(962..1372)
                     /locus_tag="QF359_03725"
     CDS             complement(962..1372)
                     /locus_tag="QF359_03725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJO86050.1"
                     /translation="MPLEKIDHYSIRTLRIEETKDFYEALGLEIGPRPDFPFPGYWMY
                     AGDMPVVHLVGFDPDNPDGLYNYLGVKDYEFPDGGGAVDHLAFRASDPEGLKKILEDR
                     SVSYREREVPSLGLLQIFAEDPNKVTVEINYYEK"
     gene            complement(1530..2627)
                     /locus_tag="QF359_03730"
     CDS             complement(1530..2627)
                     /locus_tag="QF359_03730"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86051.1"
                     /translation="MKKILKSVGTLGIAAAAATIAFGTVAEAASIKGNNITLRMGSGH
                     PPFITYVKEMSKYFGPNVVKRVAAETKYKLKFKEHYSGTVVKVSDTLEGVQDGRLDIG
                     GWCVCFDDDKAMAMNLSYFVPFGEPNAIKATKIFAKIVQQHPDIQKDYQGRYKQKLMA
                     VTGFNNYGLLTSFDWKKFEDLKGRKILAAGPNLPWVKGGIPVRTTIPTAAQQLQTGVG
                     EGIVLFPDTDFKLKLHEATKGGFYTVTDFGAVTQISLTMNMRARKKLPAEVLKIIDEE
                     ALKYQAHSSAASQNDHQWGLDKLAGAGVKVRNIDPAAKLAWAQKLAAWPNERAQAVKS
                     KKKIDMPGIMRAFMAATKAAGHKFPVDYVIK"
     gene            complement(2821..4155)
                     /locus_tag="QF359_03735"
     CDS             complement(2821..4155)
                     /locus_tag="QF359_03735"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO86052.1"
                     /translation="MEFDQNTIMIGMFVIMLIGILSGIHIAFAFAMTALIGNILIFGE
                     DDLQEGLDIALSGVGSVAYEYLRSEVFATIPLFMLLGDFVNKSGSARDLYKLINHGLK
                     AIPGRLAVATVAGNAVFAAVTGVSIAAAAAFSRIAYPQMRYHGYNRQFALGSVAGSAC
                     LGMIIPPSVLLIVWGIVAEKSIAALFIAGAIPGLILATFFMIYIAVSVKLKPELAPTF
                     EEDAEQNKLTKAEIASGFGIGALILLVLGGIWGGLFTPTEAGGVGAAGAMILGILKGM
                     RLKELAIAVVDSGKTAAPIMFLLLTANMYAKFMEAAGMSELIRETFATYNFGPVGIIV
                     IIILIWLLLGMILDSISIILITVPIFVPITAAFFDQIAFGIFGILVIEAGLLTPPFGL
                     LVYTVKGSIEDRSATLSEIFKGSVPYWMLMLIVMLMIWRWPEIATWLPSMML"
     gene            complement(4160..4708)
                     /locus_tag="QF359_03740"
     CDS             complement(4160..4708)
                     /locus_tag="QF359_03740"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO86053.1"
                     /translation="MSSEPPAWEQKTEQSVESFAKVLNVISAAWIFSVAALILFDVVG
                     REVFASPFHGTNEIVSNSVLAILMLQLPLSILNRSSLRTTIVYGKVRAMGKGIIDSIS
                     YLLAGLLFLAIAIGSWSNMVESWEILEQEGSGIVEIPVYPIRTLVVFVGFFGVAVCSL
                     LIYHSLKRPEDFDHSETTEIGE"
     gene            complement(4907..5215)
                     /locus_tag="QF359_03745"
     CDS             complement(4907..5215)
                     /locus_tag="QF359_03745"
                     /inference="COORDINATES: protein motif:HMM:NF018717.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HJO86054.1"
                     /translation="MTAYWMARSKINNRENYSKYTSLVGDILQKYGGKPLSRGGKFQM
                     MEGPDYFKRFVIVEFPTFEDAVACFESDEYQAAAEYRRNGSGEVETVIMDATEGMGAN
                     "
     gene            complement(5250..>5461)
                     /locus_tag="QF359_03750"
     CDS             complement(5250..>5461)
                     /locus_tag="QF359_03750"
                     /inference="COORDINATES: protein motif:HMM:NF012273.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HJO86055.1"
                     /translation="LAERKYFLDWGYSIVDIAIFPWVGRCDWQTIDLNEYENVKRWYL
                     EVKERPAVIRGWNVPENDQPMPMPS"
BASE COUNT         1430 a         1340 c         1306 g         1385 t
ORIGIN      
        1 ggtgaagcag ccgtccaggc cggcaaggcg ctgcgtcaaa atattgtcga agtggcaggt
       61 atcatgctgc aaagtgatcc atcgacgctg gatattcgcg acaataagat tgtcgatctg
      121 gccgatggca aagagcggat tgagctctca gaagttgggc gtgtctgtta ttaccgcccc
      181 gatacgctgc cgaaagacta ccagtcggag ctcgttgtca cccgccacta tgtgccgaag
      241 cagtttccct ttgcctttac caatggcgtg cagggctgct acctggaagt cgataccaat
      301 accggcttca ttgattttaa aaaattctgt gtggtcgagg attgcggcac ggtgattaat
      361 ccgcaactgg tcgacgagca ggtccggggc ggagtcattc aagggctcgg cggcgcgctc
      421 ttagaagaat gcctctacag tccggaaggt cagctgctta atgggacgat ggctgactat
      481 ttagtgccga tggcggtgga aatgccggat atcgtagttg gccatgttga aagcccaacc
      541 ttggattccg agctcggcgc taaaggggct ggtgaagccg gtactggcgg cgcaccagct
      601 gtggtgatga atgcgatcaa tgacgccctt aatccgctcg gcggcaaggt aaccgttcag
      661 cccttcaccc cagagcgcat tctccaggcg attggcaaga tctaaatcgt gggattgccg
      721 ctgaggccta aggcatagcg gccaaactct gcacccaaga catcctagga aatgctgata
      781 tgagtattgc cgacactggc gtcccgatag cggtgctgga tcggattgtc ttaataagca
      841 ccgctgctgc cagtcgcttt ataaagccct tcaacagcgt caaagcatag attggcgacg
      901 taagctgcgt tgccagtcga cttggttggt aatttccatc acaccatcag ccaatgtaga
      961 ctcacttttc gtagtaattg atctcaacgg taactttgtt cgggtcctcg gcaaaaattt
     1021 gcagcagtcc caaacttggc acctcacgtt cgcggtaact gacgctgcgg tcttcaagaa
     1081 tttttttgag accttccgga tcggaggccc tgaaagcgag atgatcaacg gcaccaccgc
     1141 catccgggaa ttcgtaatct ttgacgccga gatagttgta aaggccgtcc gggttgtcag
     1201 gatcaaaccc aaccagatga acaaccggca tatcgcccgc atacatccaa taacctggga
     1261 acggaaaatc aggccgtggt ccgatttcaa gaccaagcgc ctcataaaaa tccttggttt
     1321 cctctatgcg aagtgtgcgg attgagtaat gatctatttt ttccaggggc atttttggcc
     1381 tcgtttaagc tggtgataat tcactgacac ttggctaagt attcatttga tcaataagct
     1441 tttttttacc cggtaaaatg agaatatgca ccaataaaag aggcagccaa taaggccgcc
     1501 tctcttaaat taggtatttt actgatctat tacttgatga cgtaatcaac cgggaattta
     1561 tgaccggctg ctttcgtcgc tgccataaag gctctcatga tacctggcat atcgattttc
     1621 tttttcgatt tcaccgcttg agcgcgctca ttcggccaag cagccagctt ttgagcccag
     1681 gcaagttttg cggcgggatc aatgttgcgg actttgacgc cggctccagc cagcttatca
     1741 agaccccatt ggtgatcatt ttgcgatgcc gctgatgaat gtgcctgata tttcaatgct
     1801 tcttcatcaa taatttttaa aacttctgcc ggcaattttt tgcgtgcccg catattcatg
     1861 gttaaagaaa tttgcgtcac tgcaccaaaa tccgtaaccg tgtaaaaacc acccttggtc
     1921 gcttcatgca gcttcaattt gaagtcggta tccgggaaca gcacgatacc ttcaccaaca
     1981 ccggtttgca gttgctgagc ggcagtcgga atggtcgtgc gtaccggaat gccaccttta
     2041 acccatggca agttcggacc ggcggcgagg attttgcggc cttttaggtc ttcgaacttt
     2101 ttccaatcaa atgaggttaa caggccataa ttgttaaagc cggtaacggc catcaacttt
     2161 tgtttatagc ggccttgata atctttttgg atatccggat gctgctgcac gatcttggca
     2221 aaaattttgg tcgctttgat tgcattcggc tcgccaaacg gtacgaaata agaaaggttc
     2281 attgccatcg ctttgtcatc atcaaagcag acgcaccaac cgccgatatc gagacggccg
     2341 tcctgaacgc cttccaacgt atcagaaact ttaaccaccg taccggaata gtgctccttg
     2401 aatttcaatt tatatttggt ttcggcggcg acgcgtttaa ccacgttcgg cccaaaatat
     2461 ttggacattt ccttaacgta agtgatgaac ggcggatgac cggatcccat acgcagggta
     2521 atattattac ctttgattga tgcggcttcg gcgacggtgc cgaacgcgat ggtggcggct
     2581 gcggctgcga tgcctagtgt gccaactgat ttaagtattt tcttcacttt agttcctcct
     2641 attttggttt attgcaaagt cttgtttgta ggtgcgaaaa cgtaattctg tatcaaactt
     2701 caagtcaagt cgaagtttat gtgtagagcc tgcagattcc tgaaaatatt gatccattcg
     2761 ccaccctaat cacgaaatgt gtttgcatta tgcgttcaat atttcgttac ctctcaggtt
     2821 tcaaagcatc atggacggca gccaggtggc tatttcaggc cagcgccaga tcatcaacat
     2881 gacaattaac atgagcatcc aataggggac cgaccctttg aatatctctg acaaggttgc
     2941 cgatcgatct tcaatcgatc cttttacggt atagaccaac aaaccgaatg gcggcgtcaa
     3001 aagacctgct tcgatcacca gaataccaaa aataccaaag gcgatttgat cgaaaaatgc
     3061 cgctgtgatc ggcacaaaaa tcggcacggt gattaaaata atcgaaatcg aatccaaaat
     3121 catgccgagc aacaaccaga tcaggataat aataacaatg atacccactg ggccgaaatt
     3181 ataagtggcg aaggtttcgc ggatcaattc cgacatgccg gcggcttcca tgaacttggc
     3241 gtacatattg gcggtcaaca gcaggaacat aatcggtgcg gctgtttttc cggaatcgac
     3301 aacggcgatc gccaattcct ttaatcgcat acccttaagg ataccgagga tcatggcgcc
     3361 cgctgcacca acaccgccgg cttcggtcgg ggtgaacaac ccgccccaga tgccgccaag
     3421 gaccagcagg atcagcgcgc caataccaaa gccgctggcg atttccgctt tggtgagctt
     3481 gttttgctcg gcgtcttctt cgaaagttgg cgccagttcg ggtttaagct ttaccgaaac
     3541 ggcgatataa atcatgaaaa aagtagccag gatcaaaccg ggaatagcgc cggcgataaa
     3601 cagcgcggca atggatttct cggcgacaat tccccaaacg atcaacagca cactgggtgg
     3661 aatgatcatg ccgagacagg cactgcctgc gaccgaacct agggcaaact gacggttata
     3721 accgtggtag cgcatttgcg gataagcgat ccggctgaag gccgcggcgg cggcgatact
     3781 gacgccggtg accgcggcaa atacggcgtt accggccacg gtagcaacag ccaggcggcc
     3841 tggaatggct ttcagaccgt gattaatgag tttgtagaga tcgcgtgccg atcctgattt
     3901 attgacaaaa tcacccagca acataaacaa cggaatggtc gcaaacacct cgctgcggag
     3961 atattcatac gcgacgctgc caactccact aagagcgatg tccaatcctt cttgaagatc
     4021 atcttcgcca aaaatcagaa tgttgccgat caaggccgtc atggcgaaag caaaagcgat
     4081 gtgaataccg gacagaatgc caatcagcat aataacaaac atgccgatca taatggtgtt
     4141 ttgatcaaat tccattaatt tactcgccta tttccgttgt ttcgctgtga tcgaaatctt
     4201 caggccgttt cagcgagtgg taaatgagga ggctgcaaac cgcgacacca aaaaagccga
     4261 caaacactac caatgtcctt atcggataaa ccggaatttc aacaataccg gagccttcct
     4321 gttcaagtat ttcccacgat tcaaccatat ttgaccaact gccgatggcg atagcgagga
     4381 atagcaggcc agcaagcaag tatgaaatgg aatcaataat ccctttgccc atggcgcgga
     4441 ctttgccgta aacaattgtt gtgcgtaagg aactgcgatt gaggattgat aagggaagtt
     4501 gcaacatcag gattgccagc actgagttgg aaactatttc attggtgccg tgaaatgggc
     4561 tggcaaatac ttcccggcca acaacatcga atagaattaa ggcggcgact gaaaaaatcc
     4621 aggcagcgga aataacgttt aatactttgg caaaagactc gacggattgt tccgtctttt
     4681 gttcccaagc cggtggttcg ctcgacataa gttccctgga tccttctctg cgcaatttta
     4741 ttttttaatc ttatggtctt ctataagaca tctacatgcg gttcgccaca agatatttat
     4801 tttcaacaac aatttacgat cttcgatatt tttgtgggta aacaatttct atcggggtta
     4861 aaaaaaggcg gcttataagc cgccttctgt acatgattaa atgttgttag ttggcaccca
     4921 taccttctgt cgcatccata ataacggttt caacttcacc ggaaccattg cggcgatatt
     4981 ccgctgcggc ttggtattca tctgattcaa agcaggcgac cgcatcttcg aaagtgggaa
     5041 attcgacaat aacgaaacgt ttgaaataat ccgggccttc catcatttga aacttgccgc
     5101 cgcgtgataa cggtttaccg ccatatttct gcaaaatatc gccgacgagc gaagtgtatt
     5161 ttgagtaatt ttcccggtta ttaattttag accgggccat ccaataggca gtcataataa
     5221 aatctccttt agtgtgctaa gccggccctt taactaggca ttggcatcgg ttgatcattc
     5281 tccggcacgt tccagccccg gatgacggcc gggcgttcct tgacttcaag ataccaccgt
     5341 ttaacgtttt catattcgtt gagatcaatg gtctgccaat cgcagcggcc aacccagggg
     5401 aagatggcga tgtcgacaat cgaataaccc caatcgagga aatatttgcg ctcagctaat
     5461 c
//
LOCUS       DASCNL010000276         2428 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000622054, whole genome shotgun sequence.
ACCESSION   DASCNL010000276 DASCNL010000000
VERSION     DASCNL010000276.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000622054"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="QF359_03755"
     CDS             complement(<1..340)
                     /locus_tag="QF359_03755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091220.1"
                     /note="Catalyzes the deamination of guanine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanine deaminase"
                     /protein_id="HJO86056.1"
                     /translation="MSANPDIKAPLALKGRVLTFNDVRDPGQYDYWEKGCVVLENSHI
                     SAVGEAGAVAIPDAAKVIDCGDDLILPGFIDGHVHYPQMSVIASYGAKLIDWLNAYTF
                     PEEAKFSDETY"
     gene            complement(422..1504)
                     /locus_tag="QF359_03760"
     CDS             complement(422..1504)
                     /locus_tag="QF359_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HJO86057.1"
                     /translation="MNSKRLFLGALLAAAMVVGASAGYAAEKKTKVGFVYVGPIGDHG
                     WSYQHNVGRMAIARTFGDQVKTTYVESVPEGADAARVITKLARTGHKLIFTTSFGYMN
                     PTLKVAKRFPKVKFEHATGFKRSKNVTTYSARFYEGRHVVGLIAGKMTKSNILGYVAS
                     FPIPEVIRGINATIIAARSVNPNIKIKVVWVSSWFDPGKEADAAKALIAQGADIIMQH
                     TDSPAPLQQAQKNKVWAVGQASDMVSFGPKAQLTAIIDNWNAYYIRRTKAVLDGTWKS
                     QDTWGGFKAGMVSMAPYNKAIPADIVALAEKAKNGIIAGTVHPFAGPIKNQAGKIVVP
                     AGKNADDGMLLGMNFYVEGVDGTIPK"
     gene            complement(1542..>2428)
                     /locus_tag="QF359_03765"
     CDS             complement(1542..>2428)
                     /locus_tag="QF359_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO86058.1"
                     /translation="TASTPLVFATVGEIVVEKSGVLNLGIEGMMIVGAIFSFGIGVTT
                     GSATLAILGGAVAGAAVALIFGFLTLYLLSNQVATGLALTIFGLGFSALLGHGFVGKT
                     FPGLPKLEIPFISEIPFFGPLLFGHDILVYGSVVIVILVTYTLNKTRTGLLIRAVGEN
                     HHAAHSIGYSVNKIRMACVLFGGAMAGLGGSYLSLAYTPLWVENMTAGRGWIALALVV
                     FASWKAWRAFFGAYLFGGITIIQLHAQGFGVEIAPQFLSMLPYLATVVVLVLISRDSS
                     RARLSAPACLGRSFHASG"
BASE COUNT          675 a          643 c          562 g          548 t
ORIGIN      
        1 cgtatgtctc gtcggaaaat tttgcttctt ccggaaatgt ataagcgttg agccagtcaa
       61 taagtttggc accgtaagac gcaatgacac tcatctgagg ataatggaca tgaccatcga
      121 taaatccggg taagatcaaa tcatcgccac aatcgatcac tttggccgca tctgggatgg
      181 caaccgctcc agcctctcca accgcactga tatgactatt ttcaaggaca acacagccct
      241 tttcccaata atcatattga ccgggatctc ggacgtcatt gaaggttaag actcgcccct
      301 tcaaggcaag cggagctttt atgtcagggt ttgctgacat ggcgaagttt tcttctttta
      361 aaaaaaagta aggttggcgg gacccgatac caaaaaccgg gtccccgcaa caaacgtctg
      421 cttatttcgg tatggtaccg tcaacgcctt cgacgtagaa gttcatacct aacaacatgc
      481 cgtcatcggc atttttacca gccggcacaa cgattttgcc tgcttggttt ttaatcgggc
      541 cggcgaacgg atggaccgta ccagcaataa taccgttctt ggctttttcc gccaaggcga
      601 caatatctgc tggaatggct ttgttgtaag gtgccatcga gaccatgcca gctttaaagc
      661 caccccacgt atcctgggat ttccaggtac catcgagcac agctttggtg cgccggatat
      721 aataggcgtt ccaattatcg atgatagctg tcaactgggc tttgggacca aaggaaacca
      781 tatcagacgc ctgaccaacg gcccaaactt tattcttttg ggcctgctgc aatggcgctg
      841 gcgaatcagt gtgctgcata ataatgtcag cgccctgggc aattagagct tttgccgcat
      901 cggcttcctt gcctggatca aaccaggaag acacccaaac aactttaatt ttaatatttg
      961 gattcaccga gcgagccgcg ataatcgtcg cattgatgcc ccggatcact tccggaattg
     1021 gaaaagaggc gacgtaaccc aggatgttgg atttggtcat tttaccagct atcaagccaa
     1081 caacgtgacg gccctcataa aaacgagctg aataggtcgt aacgttttta gagcgtttga
     1141 aacctgtggc gtgctcaaat tttactttcg ggaaccgttt ggcaactttc aatgtcgggt
     1201 tcatatagcc aaaagacgtt gtgaagatca gcttgtgacc cgtgcgcgcc aatttagtga
     1261 tcacccgggc ggcatcagcg ccttccggca cagattccac ataagtggtt ttaacctgat
     1321 cgccaaatgt ccgggcaatc gccatgcgcc caacattatg ttgatacgac cagccgtgat
     1381 caccaattgg gccaacatag acaaaaccga ccttggtttt tttctctgcc gcataaccag
     1441 cggaagcacc aacgaccata gcggccgcta aaagagctcc taaaaataga cgttttgaat
     1501 tcatcgtttt cctccgattg agatgtttaa ttttatttac gttaacctga agcgtggaaa
     1561 ctcctgccca aacaagcagg agcactaagt ctcgcccgtg aactgtcccg tgatatgagc
     1621 acaagaacca ccacggtggc aagataaggt aacatggaca ggaattgcgg agcgatctcg
     1681 accccgaacc cttgcgcatg taattgaata atggtgatac cgccgaacaa ataagctccg
     1741 aagaaagcgc gccaggcttt ccaggacgca aaaacaacca atgccagagc aatccagcct
     1801 cggccggccg tcatgttttc aacccagagc ggcgtatagg cgagcgaaag ataagagcca
     1861 ccgagccccg ccattgcgcc accgaacaac acacaggcca ttctaatctt attgacggaa
     1921 tagccgattg aatgcgctgc gtgatgattt tcaccaaccg cccggatcaa cagacctgtc
     1981 cgtgttttat tgagcgtata ggtaactaag atcacgatga cgaccgaccc atacaccaat
     2041 atgtcatgac cgaacagcag cggaccaaaa aacggaattt cgctgataaa cggaatttcc
     2101 agcttgggca gaccggggaa agttttgccg acaaagccat gccccaatag tgcactaaag
     2161 ccgagcccaa aaatcgttaa ggccagaccg gtcgccactt gattggacaa taaataaagc
     2221 gtcagaaaac caaaaataag cgccactgcc gcaccggcaa cagcgccgcc tagtatcgcc
     2281 agcgtggcac ttccggtggt aacgccaatg ccaaaggaga aaatcgcgcc aacaatcatc
     2341 ataccttcga tgccaagatt gagcacaccg gatttctcaa ccacgatttc accgacggtg
     2401 gcaaacacca gcggcgtcga ggcggtta
//
LOCUS       DASCNL010000277         1235 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000624432, whole genome shotgun sequence.
ACCESSION   DASCNL010000277 DASCNL010000000
VERSION     DASCNL010000277.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000624432"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1235
                     /locus_tag="QF359_03770"
     CDS             <1..>1235
                     /locus_tag="QF359_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86059.1"
                     /translation="DSDIYEYEFDSCAKVVAAFQQRLPEVATLIKAINIADLEIANTY
                     LEAKHDSYFDSFDEASISTQDLALFPPYLVCLDGDHLDDTGIGEILAILSSSTPIKIL
                     FQTNTILPSPNDLEGPFSTGFHDAQLATMAIGINSAYVLQSGNAGLYQLKDQIVGGLN
                     FAGPTLFSVFSGSSVTANVPPYMMSAAAAESRAFPTFIFDPAAGPDWACRFRIEDNSQ
                     ANIPWPVHHQEYQDQDVQRIVEDAAFTVADFAACDERYADYFDKLPEIKDRNDLVSLA
                     DFLDRENGEADSGIPYVSIVDEKHILHRTLVTDRLVQASRQYASAWRSIQELGGIGNS
                     HAENLISRERENWQQKNYPAPEAIPDAPEKPKISENTVKEPVAAAEAPVTVVESEPVE
                     AEMADESSSDDPYIETPRC"
BASE COUNT          308 a          329 c          293 g          305 t
ORIGIN      
        1 tgacagcgat atttatgagt atgaattcga tagctgtgcg aaagtagttg ccgccttcca
       61 gcagcgcttg ccggaggtgg ccactctgat taaggcaatt aatatcgccg atttggaaat
      121 cgccaacact tacctagaag caaaacacga cagctatttt gatagcttcg atgaggcatc
      181 aatatcgacc caggatttgg ctttgtttcc accctatttg gtttgcctgg acggcgatca
      241 tctcgacgac accggaatag gcgaaatttt ggccattctt tcatcgtcaa cgccgataaa
      301 gatattattc caaaccaata ctattctacc gagtccaaat gatctcgaag ggccgttctc
      361 caccggtttc cacgacgccc agcttgccac catggcaatc ggtatcaata gcgcctatgt
      421 cctgcaatct ggtaacgccg gtctttatca gcttaaagac caaattgtcg gcggtctaaa
      481 ttttgcgggt ccaacgctct ttagtgtttt ttctggctca tcagtcaccg caaatgtacc
      541 gccttacatg atgtccgcag cggcggccga gtctcgagct tttcccacct tcatcttcga
      601 tcctgcagct ggaccggatt gggcatgccg gttccgcatc gaagacaact cccaggccaa
      661 tattccctgg ccggtccacc atcaggaata ccaagaccaa gatgttcagc gtatcgttga
      721 agacgcggcc ttcacggtgg ctgattttgc tgcttgtgat gaacgttacg ctgattactt
      781 cgataaactc cccgaaatca aagatcgtaa cgatttggtt tcgctggccg actttcttga
      841 tagggagaat ggagaggctg atagcggcat cccttatgtc tcgattgtcg atgaaaaaca
      901 tatcctccat cgaacacttg ttacggatcg gctggttcaa gcctcccgcc agtacgccag
      961 tgcttggcgt agtattcagg aattgggcgg cattggtaat tctcatgccg aaaacctgat
     1021 tagccgtgag cgggaaaact ggcagcagaa aaactacccg gcgcctgaag ccatacctga
     1081 cgcgccggaa aaaccaaaaa tttcagaaaa tacagttaaa gaaccagtgg ccgcagccga
     1141 ggcgcccgtc actgtggttg agtccgaacc agtcgaagct gaaatggctg acgagtcgtc
     1201 ctcggacgat ccctatattg aaaccccccg ctgca
//
LOCUS       DASCNL010000278         2699 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000626635, whole genome shotgun sequence.
ACCESSION   DASCNL010000278 DASCNL010000000
VERSION     DASCNL010000278.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000626635"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(326..886)
                     /locus_tag="QF359_03775"
     CDS             complement(326..886)
                     /locus_tag="QF359_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86060.1"
                     /translation="MAFQTAQTMIVDGGIVWRGHHVDKGCAIWILEQHDKVPIAIVIA
                     PQCDSPHIAGPKHGAATRLEQLDPAGTMVGPLVARTVYGDISWDDHPVSMHRIYKVEK
                     AKLQDALSILPNIEKLSNDTSGVMAIVPTFGPDMDRLTVVYQFTSITAPGEQIDRIGM
                     SEEFQKLVIKAHDAGTLVSSRMLVAI"
     gene            complement(1955..2161)
                     /locus_tag="QF359_03780"
     CDS             complement(1955..2161)
                     /locus_tag="QF359_03780"
                     /inference="COORDINATES: protein motif:HMM:NF025731.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superinfection immunity protein"
                     /protein_id="HJO86061.1"
                     /translation="MDVALQEAIAWGSGFSFALSLLFFVPALIAFLRAHPRRWTIIIL
                     LLTLGWTGVGWLVALIWSMSSSKR"
     gene            complement(2254..2439)
                     /locus_tag="QF359_03785"
     CDS             complement(2254..2439)
                     /locus_tag="QF359_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86062.1"
                     /translation="MIRLLMSPFRLLRRILLWPLIFLGGYLFNFVFDIQFTIGFIAGW
                     MAKNGFDTIADWLLGLL"
     gene            2438..>2699
                     /locus_tag="QF359_03790"
     CDS             2438..>2699
                     /locus_tag="QF359_03790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86063.1"
                     /translation="MQIPQNWTFKSDHIADHFDQHVREHLPWYDLATFATAQMARHYV
                     PQGGNIYDIGCAIGNMGRVLAGTLNDRQASLIAIDDSTEVVTN"
BASE COUNT          702 a          721 c          665 g          611 t
ORIGIN      
        1 tctgtcagaa ggcgggccgt ataaacctaa aaaatggccc tggcaataaa aatttggcaa
       61 gaaattccaa aatggcattc tggtcattta tgcctgaatc gcaaaattcc tgtcacattg
      121 tatgcgcacg aacccacgaa atcgggtata attttattat ggttgggagg aatgcatacg
      181 acgcaccagt ctctcaatcc ctccattaca tttatgaatt gtcaccacca cgacagcact
      241 ggctaggcga gactagtaac cgtcaacggc agtaagaaaa gagcagagag gcagtcgttt
      301 ctacccctct tttctctgag ataatttata tagcaacgag catcctagag gaaacaagtg
      361 tacccgcgtc atgcgccttg attacaagtt tttgaaattc ttcggacatt cctatcctat
      421 cgatttgctc tccgggcgct gtgatcgaag taaactgata aacgacagta agccgatcca
      481 tatcaggtcc aaaggtggga acgatagcca taaccccaga cgtatcattc gataatttct
      541 caatattagg taatattgat agggcgtctt gtaattttgc tttctctacc ttgtaaatac
      601 ggtgcatgga aaccggatgg tcatcccatg aaatatcacc gtacacagtg cgagccacta
      661 atggtccaac cattgtaccg gccggatcaa gctgctcgag gcgcgtggcg gcaccatgct
      721 ttgggccggc gatgtgcgga ctgtcgcact ggggagcgat gacgatggcg attgggactt
      781 tatcgtgttg ctccagtatc caaatcgcgc agcctttatc gacatgatga cctctccaga
      841 ctatgccgcc gtcaacaatc atcgtctgag cggtttggaa cgccatgtta tcatcgctgc
      901 cgacgagacg ttcggccagc tatcgccgca accctgaatc acctaaaaaa gcgcattcag
      961 gacggcacgg aataattagc gcttttagtt acatatgctt tcttaggaag gtaagtacat
     1021 cctgacagta ttttccgact ccaaaaaaca taatgtggcc atctgaattg tacggcgggt
     1081 attcgataaa acgtacgttc cgttctgccg ctctcagagc cttggagaga cggcggctcc
     1141 cgacaagcgt gttctggccg cgtgtgcgct tggagcctgt atcgttcttg gccaccatta
     1201 gtaggacggg gacgctaata ttttctaacc tgccaatgac cctgtccatt tgtccccgcc
     1261 cgcccattgc cggagccatg accacaagag ccctaagatc gtcgcgtata gtggcggcca
     1321 tgagcgttag caagccaccc cgcgaaaacc ctataagagc tactcggcgc cgatccacat
     1381 agggtagatt ctgcccgtat tgcttgccga ccaatacgtc attgatatgt ccgcgcatag
     1441 agtgcgtttg ccgacggagc ggcgccaaac caacataacc ccctcgcgcc agggcctcgc
     1501 aggtctcttt tggggctccg cctacaacgt atcccatacc accgtgatta taaaccacaa
     1561 ggggaaatgg cccgcgacct ggaggcttgc aaaggcgccg gcgtggtggt gtaggtgact
     1621 agcttgggtg ccgagttcgc agcactactt gccactccaa ttatggcagc ggcaatcagt
     1681 gccagaccta taaggaccgt atgttgcatt ttcatcgact tccctatttt tgtatccaaa
     1741 gcctaacggg tcctatccac gcattctata gcgggtaacg cgcgaccggg agactttcct
     1801 agtgatagag gttgccgatc ctatttcgtt cgccagcaat ggggaaaagc gccttgaaaa
     1861 tcgaacaggc ctgcactgat tcgctgatcc cctccgcgcg caatccgcgc cggaattagt
     1921 tagctatatc gctgcggctg taggaaaacc gttgtcagcg ctttgacgat gacattgacc
     1981 agatcagtgc taccagccaa ccgaccccgg tccagcccaa ggttaacaat aggattatga
     2041 tggtccaacg acggggatgg gcgcgcagaa aagcaatgag agctggcacg aagaacaaca
     2101 ggctcagagc gaaggagaag cccgagcccc acgctatcgc ttcctgtaag gccacatcca
     2161 tggcactagt ttatgcgggt catagaatat agccagttca ttagggctct tctaactgga
     2221 cgaaaaatgg ggacagttct gaaccggctc ttactataac aagccaagca gccaatccgc
     2281 gatagtgtca aagccatttt tggccatcca gccagcgatg aacccaatgg tgaactggat
     2341 gtcaaagaca aagttaaaca gatagccacc aaggaaaatt agcggccaga gtaatatccg
     2401 gcgcaataac cggaacgggc tcattaggag gcggatcatg cagatacccc aaaattggac
     2461 cttcaagtcc gatcacatcg cggatcactt cgaccagcac gtccgcgaac atttaccttg
     2521 gtacgaccta gcaacctttg caacagccca gatggcgcgg cattacgtcc cacagggcgg
     2581 gaatatctac gatataggct gcgctatcgg aaacatgggc cgtgtccttg ccggaacttt
     2641 aaatgaccgg caggcctcgc tcatcgccat cgacgatagc acagaggtgg tgaccaact
//
LOCUS       DASCNL010000279         4093 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000627783, whole genome shotgun sequence.
ACCESSION   DASCNL010000279 DASCNL010000000
VERSION     DASCNL010000279.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4093)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4093)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4093
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000627783"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1210
                     /locus_tag="QF359_03795"
     CDS             <1..1210
                     /locus_tag="QF359_03795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86064.1"
                     /translation="FLQIGPFLSQLTFKHSLHVSPEPLLVTVILVLCGVMILTLRPGQ
                     LKNHRNAYAVAFAVIAGFGMATKITSAGLYLMPLLLLGRIRPIILYCLASIFFMAIFT
                     LPALGSYPKFFDWVSMITLSSSHFGTGDQTFIDFSIYFQNLWNVSSRPVFWVTLLVSM
                     LMIGWLGFKRRDKDLISENTTLALAGLCLAFVVQALIVAKHPAGHYMIPALTASAFGF
                     SLLYLLMKALCEPNGKAYQAVRLGFSIFLVVLIGTQGRAIIKLDRELIGRVNAVQTIN
                     ETIYADCAKIYFWPTSNPLYALFLASWNTEFSFAEDLQKLYPGQHIIFITPKGVIRDI
                     VKLRDIQSISNNYPCIYVRGSARFVDPGVYKLPFSDRVFSKISKMKTCHTGDESIFTW
                     GIDCKIESNR"
     gene            complement(1728..3035)
                     /locus_tag="QF359_03800"
     CDS             complement(1728..3035)
                     /locus_tag="QF359_03800"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO86065.1"
                     /translation="MSATAIGFIGLIALFVLLFLRVPVAMAMLVVGFFGTAAMNGYSA
                     ALSTLGSEAFEISVTLPLTVIPLFVLMGNLAGVSGMSRDLFNAAYCWVGHWRGGLASA
                     TIAGCAGFAALSGSSIASAVTMGRVALPEMKRFKYGDSLATGAVAAGGTLGILIPPST
                     GLIIYAILTEQSIGRLFMAGIIPGILLTCLFLIAIAIVTRIKPELGPVGPVSSMPERW
                     ASLRRSVTIVGIVLATIGGIYIGIFTPVEAAGVGAVLTFLVALYRKSLDREKIRFVIL
                     QTLGTTATVFMILIGAHVFIPFMALTHLPADMVTFLVNLDVGKTGILFLILGIYIVLG
                     TFLEGLAMLVLTLPVVFEVITQLGMSPIWFGIVVVIVLEMGLISPPVGVNVFVVKSVA
                     QEVPMGTIFRGIWPFWIAMGVCLIILVAFPEIATILPDTMFDN"
     gene            complement(3052..3591)
                     /locus_tag="QF359_03805"
     CDS             complement(3052..3591)
                     /locus_tag="QF359_03805"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO86066.1"
                     /translation="MSDKSNGADPALELLDRLVRAVALFAGGAMVVGLAILIVTAVVF
                     RYVFNSPIFGADDFNQILLVSTVAFAVAHSGRTGGQVVVEILGIVSGPTLTRWTDIFV
                     KLIGAMMMGILVWMLIESGLTAAAYGETTSSLEITLKPFFWILAFGMALYGLVLIIEM
                     VALIRGYSLSGLTGPSNDL"
     gene            complement(3627..>4093)
                     /locus_tag="QF359_03810"
     CDS             complement(3627..>4093)
                     /locus_tag="QF359_03810"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86067.1"
                     /translation="WGSAAVYMPVSKIYNALQTGVLDGVYISPGALYVPWRLSEPGEY
                     VAAGMNGPTSLFFIALNKQVWDGLSKTHQAAVKKHTGKEYSMMAANYWGGIDAKQLAT
                     AKNTQKGVKFTQLSKKAAAEFDAVTAKSVEAFLAAKEKKGIPARAIYKAATQ"
BASE COUNT         1064 a         1022 c          981 g         1026 t
ORIGIN      
        1 gtttcttcaa atagggccgt ttctatcaca actcactttc aaacactccc tgcatgtatc
       61 ccccgaaccc ttacttgtca ccgttattct tgttttatgc ggagtaatga ttttgactct
      121 tcgaccgggt cagttgaaaa accatcgcaa tgcctacgct gttgccttcg cagtaatagc
      181 tggttttggt atggccacaa aaattacgtc tgccggatta taccttatgc cgttacttct
      241 gcttggaaga attcgtccaa taatactcta ctgtctcgcc tcaatttttt tcatggcgat
      301 atttacgcta cctgcgttgg gctcatatcc aaaatttttc gattgggttt caatgatcac
      361 gttatcaagc tcgcattttg gtaccggaga tcaaactttt attgattttt cgatctattt
      421 tcagaatctc tggaatgtat ccagtcgacc cgtgttttgg gtcacactcc tcgtttctat
      481 gttgatgatc gggtggctag gttttaagcg tcgggataaa gatttaattt ccgaaaatac
      541 caccttggcc ttggcggggc tttgcctagc ttttgttgtt caagctctaa ttgttgctaa
      601 acatccagct ggtcattaca tgattcctgc tctgaccgcc agtgctttcg gattttcgct
      661 gttatatttg ttgatgaagg cgttgtgtga accgaatggc aaagcgtatc aagccgtgcg
      721 actaggtttt tctatttttc tggtagtttt aattgggaca caaggacgcg ccatcatcaa
      781 actagatcgg gaattaattg ggcgggtcaa tgcggttcaa acaatcaatg aaaccatcta
      841 tgccgattgt gccaaaatct atttttggcc cacctctaac ccgttatatg ctttgtttct
      901 cgcaagctgg aataccgaat tttccttcgc agaagacctt caaaaactgt acccaggcca
      961 acacataata ttcataactc caaagggcgt aattagagat atagttaaat tacgggacat
     1021 acagtcaatc tcgaacaatt acccttgtat ttatgttcga ggttcggccc gtttcgttga
     1081 tccaggggta tacaaattac cattttcaga tcgtgtattt tcaaagatat caaaaatgaa
     1141 aacttgtcac acaggagacg aatccatttt cacttggggt atcgattgta agatagagag
     1201 taatcgctaa cttatttttg aaaagtttgt tattaaacta attcgtttac tggggggtag
     1261 tgccagaata ttaatgtccg cttgtggcta aaaacggaca ttacctttac agtaaaggtg
     1321 acgatatcca gccttagttg ccttgggcat cttaaatcgg ctggaaagga tagtgcagtc
     1381 gaatcaatga ttttatttgc ggctatcgca ttaaaaaatc gtcgagcaaa tcttctggtg
     1441 aatggccttc taaattgatg cgaattttct ttaatacgtt tcgcatagtt tcaaaatcag
     1501 cacctgaaat ctctgcttag gcgatattgt taatatttag taactttagg tagaaactta
     1561 cctttgaaat cttgcccctt cggggtgagt taattttcca tcgccgggca tcgtttaaat
     1621 cagcggctaa tcgaatgaag ccacgttttt tcatgttacg catggcctta actaaagtag
     1681 gctgagtgaa gctagttaga taggatagtt ctttttgagt gaggccatca gttatcaaac
     1741 atcgtatcgg gcaggattgt ggcgatttcc gggaaagcga cgaggatgat caggcagacg
     1801 cccatggcga tccaaaaggg ccagatgccc cggaaaatgg tgcccatggg gacttcctgg
     1861 gcgacgcttt tgacgacaaa cacgttgaca ccaaccggcg ggctgattag gcccatttcc
     1921 aaaacgatga ccacgactat gccgaaccag atgggactca tgcccagctg ggtgatgact
     1981 tcgaacacca caggcaaggt cagtaccagc attgccaggc cctcaaggaa ggtgccgagc
     2041 acaatataaa tacccaaaat cagaaaaaga atacccgtct taccaacatc caaattaacc
     2101 aagaaagtca ccatgtcggc gggcagatgg gtcagtgcca tgaacggtat aaagacatgg
     2161 gcgccgataa gtatcatgaa gacggtggcg gtggtaccta gggtctgcag aatgacaaat
     2221 cttattttct cccggtccag agatttccgg tacaacgcca ccaggaaagt tagcaccgcg
     2281 ccgactccag ccgcttcgac cggggtaaag ataccaatat aaatgccgcc gatggtcgcc
     2341 aggacgatgc cgacgatggt caccgagcgg cgcaaagacg cccatctttc tggcatactg
     2401 ctcaccggcc ccaccgggcc cagttcaggc ttgatgcggg taacgatggc tatggcgatc
     2461 aggaacaagc aggtcagcaa aataccggga atgatgcccg ccatgaacaa acggccgata
     2521 gattgctcgg tcaaaatggc atagatgatc agtccggtcg acggcgggat cagaatgccc
     2581 agggtgccgc cggcggccac cgcaccagtg gccaggctgt cgccatattt gaaacgcttc
     2641 atttcgggca acgccacccg gcccatggtc acggcggagg ctatcgatga accgctaagc
     2701 gcggcaaagc cggcgcaacc ggcgatggtc gccgaggcta atccgcctcg ccaatggcca
     2761 acccagcaat aagcggcgtt aaacagatca cggctcatgc ccgacacgcc ggccagatta
     2821 cccattagca cgaacagtgg aatgacggtt aagggcaggg tcactgaaat ttcaaaggct
     2881 tcgctaccta gtgtgctcag cgcggcgctg tatccgttca tggcggcggt gccgaagaag
     2941 ccgaccacca gcattgccat ggccacgggc acccgcaaaa acaataagac aaagagcgca
     3001 atgagtccga tgaaaccgat ggcagttgcc gacatttaaa cttcccccct gttacagatc
     3061 attcgagggg ccggtcaacc cgcttaaact atagccccgt attagcgcca ccatttcgat
     3121 aatgagcacc aatccataga gcgccatacc aaaggcaaga atccagaaaa acggcttcag
     3181 ggtgatttcc agggaactgg tggtttctcc ataggccgcc gcggtgaggc cgctttcaat
     3241 caacatccag accagaatac ccatcatcat ggcgccgatc agcttgacaa aaatatcggt
     3301 ccagcgggtg agtgttggcc ccgaaacaat gcccagtatc tcgaccacca cctgaccacc
     3361 ggtgcgccca ctatgggcga cggcgaacgc gaccgtggat accagcagga tttggttgaa
     3421 atcatcagcg ccaaaaatgg gtgagttgaa gacataacgg aacaccacag cagtcacgat
     3481 cagtatcgcc agcccgacaa ccatggcacc acctgcaaac aaagcaacgg cgcggaccag
     3541 gcgatctaat aattcgaggg ccgggtccgc tccgttggat ttatctgaca cgcatacctg
     3601 ctcagtctta gcttaatgtt ttcgctttat tgggtggcag ctttgtaaat cgcccgcgcc
     3661 ggaatgcctt tcttttcctt tgccgcgagg aaagcttcaa ccgattttgc ggttaccgca
     3721 tcaaattccg cggccgcttt tttcgacaac tgagtgaact tgacaccttt ttgtgtgttc
     3781 ttggcggtgg ctaattgctt agcatcgatg ccgccccagt aatttgcagc catcatggaa
     3841 tattctttcc cggtatgttt tttgacagcg gcctgatgcg ttttcgacag gccgtcccag
     3901 acctgtttat tcagggcgat aaagaacagc gatgttgggc cgttcatacc ggcggcgaca
     3961 tattcaccgg gttcagacag gcgccacggt acatacaagg caccgggaga aatataaacg
     4021 ccgtcgagaa caccggtttg caaggcgtta tagatcttgg acaccggcat ataaaccgcc
     4081 gccgaacccc agg
//
LOCUS       DASCNL010000280         4317 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000629914, whole genome shotgun sequence.
ACCESSION   DASCNL010000280 DASCNL010000000
VERSION     DASCNL010000280.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4317)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4317)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4317
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000629914"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1552
                     /locus_tag="QF359_03815"
     CDS             <1..1552
                     /locus_tag="QF359_03815"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86068.1"
                     /translation="VGGWVVLRLNHAFDLPFELNFLAAGVITSGFGMILALPALRLRG
                     LYLALVTLMAAGGFEIIFSTFQFPNGGEGFWGVKFGGFSADFRRPTIAQSDEAYMRYT
                     IFVCTLGMLLIEFHRRLAPGRAWALIKRSEAAAMSAGVNVTLYKTWAFGISGLLAGIS
                     GALLAGSLGLLSGGTFGASESIMVFALAIVGGANFWLGAIVAATLFRILPALLNDWGL
                     DADLSFVIFGAGLLHAVIYAPNGIAGQLMEMGSVVRKKIEPISDRLRIQNSAAKEKTE
                     LSASIEITDVSVHFGGVVALDNISASFTKQVNGIIGPNGAGKTTLMNVFSGFVSPEGG
                     SIGIDGQILTELAPHKREHWGLRRSFQREEIADDLTVFDNVLAQLDGMGFITSQKASD
                     VAHALDIVGMGEHSWRPAVELNNFERRLTDVAKCLVGYPKVIMFDEPAAGLSSEETEK
                     LGELILSIYKHTGAKTLVIDHDVDLIAKICEETLVLDFGERIAFGETSKILSDPKVRA
                     AYLGVGES"
     gene            1557..2261
                     /locus_tag="QF359_03820"
     CDS             1557..2261
                     /locus_tag="QF359_03820"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86069.1"
                     /translation="MSLTINNLTVLIANKPVVKDVSLSVAPGKVTAILGANGAGKSEL
                     VLAAAGMLDVSKGFVHVDGQDITNEKPDAIRRAGVAAVPEGHRILTKLSVDDNLRAAG
                     SMLATGLVETLDKTYMIFPELAKRKSQIAGTLSGGQQQMMALGHALMSQPKYVLLDEM
                     SLGLAPLIVKRLMGVAKDMAIAGTGIILIEQFTELALGLADYACVLNDGEMHFSGEPS
                     LLQSHPEILKEAYFGS"
     gene            complement(2601..2677)
                     /locus_tag="QF359_03825"
     tRNA            complement(2601..2677)
                     /locus_tag="QF359_03825"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2641..2643),aa:Arg,seq:acg)
     gene            2964..4106
                     /locus_tag="QF359_03830"
     CDS             2964..4106
                     /locus_tag="QF359_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86070.1"
                     /translation="MTFINNRLIVVSATVLITGFLTGCSFPSETLLPSLTGEDPSGSS
                     TISQRQVASVRTQSPAMGTTKFEPKGVTAGSNSGTLVGQKAVELRKELRRLQSGVSKN
                     NSELQSIRAKTVQDSQRYHGAVSAINARLQVGTTPGNPVLVEQFNQALSDLKKIGDDI
                     SDMNVLTTNVTADSTLAAFLAENTRAAFKLSGAVDEDHQQLAILEDEVNRTVVLIDRL
                     LKELSEDIQRQTNYVATERSNLNTLSAAVKSGELMGSSLTNRALTAATAGTINRRASP
                     RSLAGRRPLMVIRFDRASVAYEQALYNAVSRSLERHPNATFELVAVAPASGGAARVAL
                     NSNKARRNAENVMRSLQRMGLPPQRIAVSARTSRAAQSNEVHLYLN"
BASE COUNT         1088 a          962 c         1085 g         1182 t
ORIGIN      
        1 tgttggtggt tgggtagtgc tgcgtttaaa ccatgcattc gatctaccgt ttgagctcaa
       61 ttttcttgct gccggggtca taacttctgg gttcggtatg atcctggcat tacctgcact
      121 tcgtttgcgc ggactttatc ttgcacttgt tacgttgatg gcggccggtg ggtttgagat
      181 aatttttagc acgtttcagt tccccaatgg cggggaggga ttctggggtg tgaaattcgg
      241 aggattcagc gctgatttta gacgtcctac tattgcgcaa tctgatgaag cttacatgcg
      301 atatacgatt tttgtgtgca ctcttgggat gttgctgatc gaatttcatc gtcgtttggc
      361 gccgggtcgc gcctgggctt tgattaaacg atcagaagcg gcggcgatgt cggctggggt
      421 aaatgttaca ctatacaaaa cctgggcttt tggaatatct ggcctgttag ccggaatctc
      481 aggcgcgttg cttgcaggca gtttgggatt actttcgggc ggcacctttg gtgccagtga
      541 aagcattatg gtatttgcct tggctatcgt aggcggtgca aatttttggt tgggtgcaat
      601 cgtagcagcg actttgtttc gcatcttacc agctttgtta aatgattggg ggcttgatgc
      661 agatctgtcc tttgttattt tcggcgcggg attgcttcat gcagttatct atgcgccaaa
      721 tggtattgcc ggacaactca tggagatggg ctctgtcgtc agaaaaaaaa ttgaaccaat
      781 ctccgaccgt ctgcggattc aaaattcggc ggcaaaagaa aaaactgagc tgtctgcttc
      841 gatagaaatt accgacgtat cggttcattt tggcggcgtc gtggcgttgg acaatataag
      901 cgccagtttc accaagcagg tcaacggtat catcgggccg aatggagcgg gtaaaaccac
      961 attgatgaat gtcttttcgg ggtttgtatc gcctgaaggt ggctctatcg gtatcgatgg
     1021 tcagattttg acggagttag cgccgcataa aagagagcat tggggactac ggcgatcttt
     1081 tcaacgcgaa gaaattgccg acgatttaac tgtttttgac aacgtcctgg cgcagctcga
     1141 cggtatggga tttatcacat cgcagaaagc gagtgatgtt gcccatgctt tggacatcgt
     1201 tggcatgggc gaacattcct ggcggcccgc cgttgaatta aacaattttg aacgacgctt
     1261 gacggacgtt gccaaatgcc ttgtcggcta ccctaaagtc attatgtttg atgagcccgc
     1321 agcgggcctt tcgtcagaag aaacagagaa attaggtgag ttaatcctct cgatttataa
     1381 gcacactggt gcaaaaaccc tcgtcatcga tcatgacgtt gatttgattg caaaaatttg
     1441 tgaagagact ttggttctcg atttcggcga acgcattgct tttggggaaa cttctaaaat
     1501 actgtctgat ccaaaagtgc gagctgccta tcttggtgtg ggagaaagtt aaaagcatgt
     1561 ctctgaccat caataatcta acagtactaa ttgcaaacaa acccgtcgtt aaagatgtca
     1621 gcctatcggt tgcgccgggt aaggtaacgg caatcctcgg tgcaaatgga gcgggaaaat
     1681 ctgaactggt attagctgcc gccggtatgt tggatgtgag caagggcttt gtccacgttg
     1741 acggccaaga tatcaccaat gaaaagccag acgctattcg ccgtgctggc gtggctgcag
     1801 ttccagaagg ccaccgtata ttaaccaagc tttccgttga tgataatctg cgcgctgcgg
     1861 gcagcatgtt ggccactggt ttggtggaaa cattggataa aacctatatg atattccctg
     1921 agctggccaa acgtaagagc caaatcgcag gtactttatc cggtgggcag cagcaaatga
     1981 tggcccttgg tcacgcccta atgtcacaac ccaaatatgt gctgttggat gaaatgtctc
     2041 tgggcctggc cccattgatt gtcaaacgcc tcatgggggt cgcaaaagat atggcgattg
     2101 caggcaccgg tattattttg atcgaacaat ttactgagtt ggcgcttggt ctcgcagatt
     2161 acgcctgcgt attaaacgat ggcgaaatgc atttttccgg agagccatct ctgctgcaat
     2221 ctcatcctga aattcttaaa gaagcctatt ttggcagcta gagcatttcc gaattattct
     2281 ggcgcataac tgggtacata catctaagcc agagggtatg tgtggtaaaa ttggagttgt
     2341 caaagcctgt aagtcttagt ggtgtatatt taatattggc tatgtctgct ttgcccctga
     2401 tagcggacat cggttaacca agcggctttc gggccttatc taactgttaa gtatatttac
     2461 aataggtata tttacaaaaa attagtaata aaatgtcagg ctggaatcaa gaaaagatgc
     2521 ctttgaggcc ggatatggtt cgatatgcta ccccatacaa aaaatgaccc agcagaaatc
     2581 tgctaagtca ttgaaagtat tggcgcaccc gggaagactc gaactcccaa cctcctgatt
     2641 cgtagtcaga cgctctatcc aattgagcta cgggtgcgaa ggggagggac actattcaaa
     2701 acggtccgct gtttcaagac atctttcgca gtcattttgg ggtacaattt gagcagaatt
     2761 agaaggattt atttacgccg gtatacttta tcccttgctt gtcaaataga ggcgctttaa
     2821 gtaatacttg ataagttgaa ggggggcatg ttaattcctt ctactaaagc attgatttgt
     2881 tgtaatgatt tagccaaaat cgcctaaaat atgagtgctc aattttgggg ctttgattaa
     2941 tttgaacgag gaaaagcggc gcgatgacct ttataaataa tcggttgatt gttgttagcg
     3001 cgacagttct gatcaccggc tttctaactg ggtgttcatt tccatccgaa acccttttgc
     3061 cgtctttaac gggcgaagat ccgtcgggca gctcaacaat ctctcaacga caagtagcat
     3121 cggtacgcac ccaatcacct gcaatgggaa cgacaaagtt tgagcccaaa ggtgtaacag
     3181 caggctctaa tagcggaacc ctcgttggcc aaaaagccgt tgaacttaga aaagaattac
     3241 gccgcctcca atccggtgtt tcaaaaaaca attctgaact gcaatcaatc cgcgccaaga
     3301 cagtgcagga ttcacaacgc tatcatggcg ccgtttcagc cattaatgcg cgattgcagg
     3361 ttggcacgac gccgggcaat ccggttctcg ttgagcaatt caatcaagca ttgtccgacc
     3421 tcaagaaaat cggtgatgac atcagcgaca tgaatgtgct gaccacaaat gttacggcag
     3481 attcaacatt ggctgctttt ttagctgaaa atactcgcgc tgcatttaag ctctcaggtg
     3541 ccgtcgatga agatcatcaa caacttgcta ttttggaaga cgaagttaat cgtaccgtcg
     3601 tgctgatcga ccggttgttg aaagagctat ctgaagatat ccagcgccaa accaactatg
     3661 ttgctactga acgcagtaat ctcaatactt tgtcggccgc ggttaaatcg ggagaattga
     3721 tgggctccag cctaaccaat cgcgcactta ccgccgccac cgccgggacg ataaaccgcc
     3781 gtgccagccc gcgctcgctt gccggacgcc ggccgttgat ggtgatccga tttgatcgcg
     3841 ccagcgtggc atatgagcaa gcactttata atgctgtcag ccgcagcttg gaacgccatc
     3901 cgaatgcaac ttttgaactg gttgctgtcg cacctgcttc tggtggtgcc gcccgtgttg
     3961 cgctcaattc gaataaggcg cgccgcaatg cagaaaacgt tatgcgttca ctgcaacgaa
     4021 tgggcttacc tccacaacgg attgcagttt cagccagaac cagccgggcc gcgcaatcga
     4081 atgaagttca tctttatttg aactagagta atctattaaa ttcaaaaagc cggcgcacta
     4141 aacgccggct tttttttcga taattccaat ttgagaagaa atgaaaagtc acggcctttc
     4201 agtatcagga tattttctcc tcattgccgt cattatcggc tggggtacat catggccgtt
     4261 tttgaaaatt ggcctcagcg aaattccgcc ttggacctat cgcgggttaa tttcacc
//
LOCUS       DASCNL010000281         4844 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000631105, whole genome shotgun sequence.
ACCESSION   DASCNL010000281 DASCNL010000000
VERSION     DASCNL010000281.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4844)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4844)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4844
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000631105"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="QF359_03835"
     CDS             <1..446
                     /locus_tag="QF359_03835"
                     /inference="COORDINATES: protein motif:HMM:NF015325.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HJO86071.1"
                     /translation="RAQFEHVPVAKIEDLITHDALAIGTPVYFGAQSSALRYFLDQAG
                     KYWMEGTLTGKPATAFAGAGSGAGREAALMSLWSTFAVFGLTIVPLGTRAQNVTPADQ
                     VTGTTPFGAATISGGNGKRPSDAELAAARIQGQALAEIMIKLKVD"
     gene            773..3454
                     /gene="acnA"
                     /locus_tag="QF359_03840"
     CDS             773..3454
                     /gene="acnA"
                     /locus_tag="QF359_03840"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HJO86072.1"
                     /translation="MSKVGQDTLKTRRSLSAGSKDYDYFSLEAASSAGLGDISRLPFS
                     LKVLLENLLRYEDGSTVTVDDVKALGAWLETKSSNREIAYRPARVLMQDFTGVPAVVD
                     LAAMRQAMKDLGGDPQKINPLSPVDLVIDHSVMIDNHGSNEAFDANVDKEFERNQERY
                     EFLRWGSEAFDNFRVVPPGTGICHQVNLEFLSQTVWTDEVDDKTVAYPDTLVGTDSHT
                     TMVNGLAVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFKLTGEMKEGTTATDLVLVVVQ
                     ILREKGVVGKFVEFYGPALDSLALPDRATLANMAPEYGATCGIFPIDEETIRFLKFTS
                     RDADRVALVEKYAKAQGMWRDASTPDPKFTDTLELDISTVEPSISGPKRPQDRIALSN
                     SSGAFQETLNTVGRGKGPIDAKGEDYQVQDGDVVIASITSCTNTSNPSVLMAAGLVAQ
                     KANALGLRPKPWVKTSLAPGSQVVSDYLEDAGLQGDLDALGFNVVGYGCTTCIGNSGP
                     LPEPVGEAITKGDLTVCAVLSGNRNFEGRIHAQIKTNYLASPPLVVAYAIAGSMTRDL
                     YNDPLGKDTDGNPVYLKDIWPTNKEVSDAVLNHITPDMFATRYSEQVWAGPEQWQNIQ
                     TEGSETYDWQEASTYIKYPSFFEGMKAEADDFSDIVGARELTVLGDSITTDHISPAGA
                     IKEDSPAGSYLTDRQVRTQDFNSFGSRRGNHEVMMRGTFANIRIKNEMAPGTEGGITI
                     HHPSGEQMPIYEAAVKYADDGVPLVIVGGSLYGTGSSRDWAAKGTRLLGVKAVIVESF
                     ERIHRSNLVGMGVLPLQFKEGQDRKILKLDGTEIFDITGIKDGIDPRMDVPCKITRTD
                     GSTEEIELLCRIDTADEVEYYRHGGILQYVLRNLKAA"
     gene            4022..>4844
                     /gene="pgk"
                     /locus_tag="QF359_03845"
     CDS             4022..>4844
                     /gene="pgk"
                     /locus_tag="QF359_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018980038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HJO86073.1"
                     /translation="MPTFRTLDDLDLAGKRVLLRVDMNVPMRDGVVTDPARIEKIVPT
                     ISEILTGGAGIVLASHFGRPKGEVVPEMSLAPLAEVLSGYLVDTEVIFSADGAHVAHP
                     GEIVLLENLRFNAGEEGNDPDFAKSLAAHGDIYVNDAFSCAHRAHASIDGVARLLPAA
                     AGRLMQQELEALCGALESPIHPVAALVGGNKISTKLGVLENLITKVDHLIVGGAMANT
                     FLFSAGLTVGQSLSEEDMAETARTIIAKAKETGCKIHLPIDAVVAGALEAGTATAT"
BASE COUNT         1141 a         1197 c         1313 g         1193 t
ORIGIN      
        1 cccgcgctca atttgaacat gttccagtgg ccaagattga agatttaatc acgcacgatg
       61 cccttgccat cggcaccccg gtttattttg gagcgcaaag ctcggccttg cggtatttcc
      121 tggatcaagc gggtaaatac tggatggaag gcaccttgac cggcaaaccg gcgacggcgt
      181 ttgccggtgc tggctcagga gccggccggg aagcagccct gatgtcgctc tggagcactt
      241 tcgcggtgtt tggcttgacg attgtgcccc tgggcacccg tgcccaaaat gtaacccctg
      301 ctgatcaggt gacgggtaca acgccgtttg gtgcggcaac gatctcaggt gggaacggga
      361 agcggccttc agatgccgag cttgccgccg cccgtattca gggccaggcc ctggccgaaa
      421 ttatgattaa attgaaagta gattaaaaaa agtggctgga aagaggtgtc tcaggggggg
      481 gacgctttcc agccgttaag ttatggcaga cgagactgcc tatgggagat aagagggcca
      541 gagtgtgtgc caatgtgctg acgactctct tgatatcagg aggcctgata gagttgcatt
      601 aaagggttca aatgtggcga caatatgcag caattataac gttttcgtgt ctttatggat
      661 caatttggcg ctaaaaaacc tcgtctgagg ctggagtttt ctgccctcat ggtgtaggca
      721 aggccccaat tctaaaacac gtttacgatc acctaaattt gaggagcact gcatgtccaa
      781 agtcggccag gataccctta aaacccgtcg ttcattgagt gccggtagca aagattatga
      841 ctattttagc cttgaggcgg catcaagtgc aggcctcggc gatatttccc gcttaccgtt
      901 ttccctaaaa gtattattgg aaaatctgct gcgctatgaa gatggctcga ccgtcaccgt
      961 cgatgatgtc aaagccttgg gtgcctggct cgaaactaaa agctcgaacc gtgaaatcgc
     1021 ttatcgtccc gcccgcgtgc tgatgcagga ttttaccggt gtgcccgctg ttgttgatct
     1081 ggcggcgatg cgccaggcga tgaaggattt gggcggtgat ccacaaaaaa ttaatccgct
     1141 gagcccagtt gatctggtga tcgaccactc agtgatgatt gacaatcacg gcagtaatga
     1201 agctttcgac gctaatgttg ataaagaatt tgagcgcaac caggaacgct atgagtttct
     1261 gcgttggggt tctgaagcct ttgataattt ccgtgttgtg ccgcccggca ccggcatttg
     1321 ccaccaggta aatctcgagt tcctgtcgca aacagtttgg accgatgagg ttgatgacaa
     1381 aacagtagcc tatccagata cgctggttgg caccgatagt cacacgacga tggtcaacgg
     1441 tctggccgtg ctcggctggg gtgtcggtgg cattgaagcc gaggccgcca tgctcggcca
     1501 gccggtctcc atgctgattc cggaagttgt cggctttaag ctcaccggtg aaatgaaaga
     1561 aggcacaaca gcgactgatc tggtgctggt ggtcgtgcaa attctgcgtg aaaaaggtgt
     1621 ggttggtaaa tttgttgagt tctatggccc ggctctcgat agtttagctt taccggatcg
     1681 ggcgacgctc gccaacatgg cgccggaata tggcgccacc tgtggcattt tcccgattga
     1741 tgaagaaacc atccgcttct tgaagtttac ctcgcgcgat gcggaccggg tggccttagt
     1801 cgaaaaatac gccaaagccc aaggcatgtg gcgcgatgca tcgacaccgg accccaagtt
     1861 taccgatacc ctggaacttg atatttcaac tgttgagcca tcaatctcag gccccaaacg
     1921 accgcaggat cgcatagccc tatcaaactc ctccggtgca tttcaggaaa ctctcaatac
     1981 cgttggccgc ggcaaaggtc caattgacgc caagggcgaa gattatcaag tccaggacgg
     2041 cgatgttgtt attgcctcaa ttacgtcctg caccaatacc tccaacccct cagttttaat
     2101 ggcagctggt ttggtggcgc aaaaagccaa tgcgctggga cttcgaccca agccctgggt
     2161 gaaaacctca ttggcgcccg gcagtcaggt ggtctcagac tatctcgaag atgccgggct
     2221 gcaaggtgat ctcgatgccc tcggctttaa tgttgttggc tatggctgca ccacctgtat
     2281 tggcaactcg ggtccactgc cggaaccggt tggcgaagct atcaccaaag gtgatttgac
     2341 ggtctgcgcg gttttatccg gcaaccggaa tttcgaaggc cgcattcatg ctcagatcaa
     2401 aaccaattac ctcgcttcac cgcccctggt ggtggcttat gcgattgccg gctcaatgac
     2461 ccgtgatctt tacaatgacc cgctgggcaa ggacactgat ggcaatccgg tttatctcaa
     2521 agatatctgg ccgaccaata aagaggtcag cgatgcggtg ctcaaccata ttacgcccga
     2581 catgtttgca acccgctata gtgagcaggt atgggctggg cctgaacaat ggcaaaatat
     2641 tcagaccgaa ggctctgaga cctatgattg gcaggaagcc tcgacttaca tcaaatatcc
     2701 atcctttttt gaaggcatga aagcggaagc cgacgacttc tcggatattg taggggcgcg
     2761 cgaacttacg gtcttggggg attcgatcac taccgatcac atttcaccgg caggtgctat
     2821 caaggaagac agtccagccg gtagctattt gactgatcgc caagttcgca cccaagactt
     2881 taactccttt ggctcgcgcc gaggcaatca tgaagtgatg atgcgcggca cgtttgccaa
     2941 tattcgcatc aaaaacgaaa tggcgcccgg caccgaaggc ggcataacca ttcatcaccc
     3001 gtccggcgaa caaatgccga tttatgaagc ggcggtaaaa tatgccgatg acggtgtgcc
     3061 tctggtgatc gtcggcggct cactttatgg caccggctcg tctcgcgact gggcggctaa
     3121 aggtacgcgg ttgctcggtg tcaaagccgt tatcgtcgaa agcttcgagc gtattcaccg
     3181 ctccaatctg gttggtatgg gtgtgttgcc cttgcagttt aaagaaggcc aggacaggaa
     3241 aatcctcaag ctggatggca ctgagatttt cgacatcacc ggcatcaagg atggtatcga
     3301 ccctcgcatg gatgtgccct gcaagatcac ccggactgat ggctcgaccg aagagattga
     3361 actgttgtgc cggatcgaca cggcggatga ggttgagtac taccggcatg gcggtattct
     3421 tcaatatgtg ctcaggaatc ttaaagctgc ctaagttgtt ttattagaat gaacagctag
     3481 gtatctcacg caattgttaa tggagaacgg ttcatacggg ccgcgtttcc tgcttttgag
     3541 tgcattctta ctggcatatg attggcgcgg tcaaagccta gctctgaccg ttccggcggc
     3601 aatggttaaa gttcatacgg ggcagggttg tgccgttttt ctgcagaaag tgcaaaaagg
     3661 accgatcctt ggctctgcat ctattcagtt ggctcaaaac gttaactgat ttcagattat
     3721 gaagatttat tgatcgatcg atcaagaagt gttgaaaatg ggaaattctt aagcaataat
     3781 aatattcatt acagagttac cccaaaggtg atcctggaat tctgcatgct cttcccccca
     3841 ttttgagcga aagaaatgga tcacccttcg agcggcttgg cttcattgcc aagccgcttt
     3901 ttttattggg cactttttat ttcggtgcat aagcaccggt gcaccttgcg cttgccaatt
     3961 ggacctttat attgcggctc aattggtttt aaaaattttt cgtaaggaac ttcaatcatt
     4021 catgccaacc ttcagaactc ttgatgacct agatttagcc ggtaagcgtg tgctgctcag
     4081 ggtcgatatg aatgtaccga tgcgggatgg cgttgtcacc gatccggcgc ggattgaaaa
     4141 aatagtacct accatcagcg aaattttaac cggtggcgcc ggtattgttc tggccagtca
     4201 ttttggccgt cccaaaggcg aggttgtgcc cgaaatgtct ttggcaccct tggccgaagt
     4261 tttaagcggt tatctcgtgg acaccgaggt aattttttct gccgatggcg cacatgtggc
     4321 tcatcctggc gaaatcgtgc tactagagaa tttgcgcttc aatgcaggcg aagagggcaa
     4381 tgatccagat tttgccaaaa gtctcgccgc ccatggcgac atctatgtca atgatgcttt
     4441 ctcctgtgcg caccgggccc acgcctcaat tgatggtgtg gcgcggctct tgccagcagc
     4501 agccggccga ttgatgcagc aggaattaga agcgctttgc ggcgcgctgg aaagccctat
     4561 tcatccggtg gcggcactgg tgggcggtaa taaaatatca accaagcttg gtgtgctgga
     4621 aaatcttatc accaaagtcg atcatttgat cgttggcggc gccatggcca acaccttctt
     4681 attttcggct ggtctaaccg ttggtcaatc gctctcagaa gaagacatgg cggagacggc
     4741 ccggacgatc attgccaagg ccaaagagac gggatgtaaa attcatctgc cgatcgatgc
     4801 cgtggtagcc ggagcgttgg aagcaggtac cgcaacagca actg
//
LOCUS       DASCNL010000282         2266 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000635756, whole genome shotgun sequence.
ACCESSION   DASCNL010000282 DASCNL010000000
VERSION     DASCNL010000282.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000635756"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..308
                     /locus_tag="QF359_03850"
     CDS             <1..308
                     /locus_tag="QF359_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HJO86074.1"
                     /translation="PTGALCSLTLSFNNDGPFGTFFRYICDNGTYIASYDDLEDGNSE
                     AIDLSEVADSFNGVELEDREFFAAIHDGREPNSSVSQCLPAMVTIDRLERCLNESTE"
     gene            complement(311..>2266)
                     /locus_tag="QF359_03855"
     CDS             complement(311..>2266)
                     /locus_tag="QF359_03855"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HJO86075.1"
                     /translation="TLWRVEDVTDLRFRDIERLHEEQFLGDLLNQLPVGFFAADGDGN
                     IRYLNSTIREWFGVRHDAKVSELPGFADFVSPNAEQNGTVETDASGMHGGLTLRALDG
                     REFPAYLIQSQKETAGGEFEYSRSIVLREPFTPVVDDGTGGPLLRRIPWLFSDSPVSI
                     VMLDIQGEVVDCNRAFLKLLGLHRDGVIGRPLSDRINKEDRSDADAQLSKVVMGIMPA
                     TLIDVRMPAGGERELTASLYVSHITDNEGDVTGLVMHVIDTTEQKNLEVQFNQAQKMQ
                     AVGQLAGGVAHDFNNLLTAMGGFCDLLLGRHGPDDPSFADIMQIKQNANRAGNLVRQL
                     LAFSRRQTLQPKVFVITDALNDLSNLLRRLIGENIELDLNHGKDVDLIRTDPGQFDQV
                     VINLAVNARDAMPGGGVITVSTERVTVKTSVQRGHEVMPAGEYILINIIDTGSGIAKE
                     DIGHIFEPFFSTKGVGEGTGLGLSTVYGIIRQSEGYIFVDSALGEGTTFSIYLPAFSA
                     AEADFVGSGFPNEIIDDADLTGAGTVLLVEDEDAVRLFGARALRNKGYRVLEANDGEH
                     ALDVINDFGDPIDLILTDVMMPGMDGHTLVRLILEELPDIKVILMSGYAEDAMPGEIS
                     EDRSLNFLPKPFSLQELAVKVKDVMAG"
BASE COUNT          600 a          622 c          505 g          539 t
ORIGIN      
        1 ctccgacagg agcgctctgc agcctgaccc tgtcgtttaa caatgatggc ccgttcggta
       61 ccttttttcg ctatatctgt gataacggca cttatatcgc cagttatgac gatctcgaag
      121 acggtaatag tgaggccatt gacttgtctg aggtggcgga ttctttcaat ggcgttgaac
      181 ttgaagaccg ggaatttttc gccgccattc acgatggccg tgaacccaac agtagtgtca
      241 gccaatgcct gccggcgatg gtgacgattg atcggttaga gcggtgcttg aatgagtcaa
      301 cagagtaatg tcaccccgcc attacatctt tcactttgac cgcaagctct tgcagactga
      361 acggtttggg caggaaattt aacgaacggt cttcactgat ttcaccgggc atcgcgtcct
      421 cggcatagcc tgacatcaaa atcactttga tgtcaggtaa ttcctctaaa attagccgca
      481 ccaaagtgtg gccatccatc ccaggcatca tgacatcggt caaaatgaga tcgatcggat
      541 caccaaaatc attaatcaca tcgagcgcat gttcaccatc attggcttcc aacacgcggt
      601 agcctttatt gcgcaacgcc cgggcgccaa ataaccggac cgcatcttca tcctcgacca
      661 acaagacggt acccgctccg gtcaaatcgg catcatcaat gatttcattg ggaaagccac
      721 tgccgacaaa atcggcttca gccgcgctaa aggccggtaa gtagatcgaa aacgtcgtac
      781 cttcacccaa ggcagaatcg acaaaaatat acccctcgga ttggcggata atgccgtaaa
      841 ccgtggaaag accaagcccg gttccctcgc cgacgccttt ggtcgaaaaa aacggctcaa
      901 atatgtgacc gatatcttct ttggcaatgc ctgatccagt atcaatgata ttaatcaaaa
      961 tatactcacc ggccggcatc acttcatggc cacgttgcac ggaggtctta acggttaccc
     1021 gttcggtcga gaccgtaatc acacccccac ccggcatggc gtctctggca tttaccgcca
     1081 aattaattac gacctgatca aattggccag gatcggtgcg gataagatca acatctttac
     1141 cgtgattgag atcaagctca atattttcac caatcaaacg tcgtagcaga ttagaaagat
     1201 cgtttaacgc atcggtaatc acgaacactt ttggctgcaa agtttgccgt ctcgaaaaag
     1261 ctaggagttg ccgcactaaa ttacccgccc gattagcatt ttgtttgatt tgcatgatat
     1321 cagcgaacga agggtcatct ggtccgtgcc ttcccaataa cagatcacaa aaaccaccca
     1381 ttgcggtgag cagattattg aaatcatgag cgacgccacc agccaactgc ccgaccgcct
     1441 gcattttttg cgcttggtta aattgcactt cgagattttt ctgctcagtc gtatcgataa
     1501 cgtgcatcac caagccggtg acatcacctt cattgtcggt aatgtggcta acataaagag
     1561 aggccgtcaa ctctcgctcg ccaccagcag gcatgcgtac atcgataaga gttgccggca
     1621 taatacccat cacaactttg gataattgcg catcggcgtc actgcggtct tctttgttga
     1681 tccggtccga cagtggccgg ccgataacgc cgtcgcggtg caggccaagc aatttcaaaa
     1741 aagcccgatt gcaatccact acctcgcctt gaatatcgag cataactata cttaccggag
     1801 agtccgaaaa cagccagggt atgcgtcgta gcaacggtcc acctgtgcca tcatcgacga
     1861 ctggcgtaaa aggttcccgc aacactatag agcggctgta ttcaaactct ccgcccgccg
     1921 tttctttttg cgactggatt aaataggcgg gaaattcccg gccgtctaag gcccgcaagg
     1981 tgagcccacc atgcatcccg ctggcatccg tttcaacggt gccattttgc tctgcattag
     2041 gagagacaaa atcggcaaag ccgggcaatt cactgacctt ggcatcatgc cgcacaccaa
     2101 accattctct tatcgtcgaa tttagatagc gtatatttcc atcaccatcg gcagcaaaaa
     2161 aaccgaccgg taactgattt aacaaatcgc ctaaaaactg ctcttcatgc agacgttcaa
     2221 tatcgcggaa gcgcaagtcg gtgacatcct caactcgcca aagtgt
//
LOCUS       DASCNL010000283         1210 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000637325, whole genome shotgun sequence.
ACCESSION   DASCNL010000283 DASCNL010000000
VERSION     DASCNL010000283.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000637325"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="QF359_03860"
     CDS             <1..410
                     /locus_tag="QF359_03860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86076.1"
                     /translation="EVMLMLEELINSDELNALEERSNFTEHRAIAVEFDALFSGARYD
                     GEPVYQALFGDQFDIIEGKADSAFLVDVSGLHHGLPPKRKARLLVWIRYGMYRNQAYQ
                     NNKLAPVDYDWSSGRVAGDPRHRYINRLVLGTD"
     gene            423..>1210
                     /locus_tag="QF359_03865"
     CDS             423..>1210
                     /locus_tag="QF359_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJO86077.1"
                     /translation="MKICIAGATGAFGTKHLEAIDAIDEIDVVSVVDVEPDRLADMAN
                     ERGIEHWTTELEESLARPEIDAVILTTPTQLHAEQAIKCLEAGKHVLIEIPMADTLAE
                     AERLIQTQQKTGLVAMAGHVRRFNPSHQWIHNRIKAGELTLQHLDVQTFFFRRSNLNA
                     LGEPRSWTDHLLWHHACHTVDLFQYQTGAPTSDIYALQGPPHPELGIAMDMNIGLKTP
                     TGALCSLTLSFNNDGPFGTFFRYICDNGTYIASYDDLEDGNSEA"
BASE COUNT          299 a          327 c          302 g          282 t
ORIGIN      
        1 tggaggtaat gttaatgcta gaagaactta tcaacagcga tgaactaaac gcgcttgaag
       61 aacgctccaa tttcacggaa caccgcgcta tcgcggtgga attcgacgcg ctattctcgg
      121 gtgcgaggta tgacggcgaa ccagtctatc aagccttatt tggagaccag tttgacatca
      181 tcgaaggtaa agccgacagc gcgtttcttg ttgatgtatc cggtctgcat catggcctgc
      241 caccgaaacg caaggcgcgt ctgttagtat ggatacgcta tggcatgtat cgtaatcaag
      301 cctatcagaa taataaactg gcgccggttg attatgattg gtcaagcggg cgtgttgccg
      361 gcgatccacg gcaccgctat atcaatcgtc ttgttctcgg tactgactga ggtctattta
      421 ccatgaaaat atgtatcgcc ggcgccactg gcgcctttgg caccaaacat cttgaagcaa
      481 tcgatgccat cgatgagatc gacgtcgtct cggtcgttga tgtcgagccc gaccggttgg
      541 cagatatggc caatgagcgc ggtattgaac attggacaac cgaacttgag gaaagtctcg
      601 cccgccctga aattgatgcc gtgatcctca ccacaccaac ccaattgcac gccgagcaag
      661 cgatcaaatg tcttgaggct ggcaagcatg ttctgattga gattccgatg gctgatacct
      721 tggccgaagc agaacggctc atccaaaccc aacaaaaaac tgggttggtg gcaatggccg
      781 gccatgtccg ccgcttcaat ccgagccatc agtggattca caatcgcatc aaagccggcg
      841 aattgaccct ccagcatctg gacgtccaaa cgttcttttt ccggcgcagc aatctgaatg
      901 ccctcggcga gccacgcagc tggactgatc atcttttgtg gcatcacgcc tgccacacgg
      961 tcgacctttt tcaatatcag acaggagcac ccacctccga tatatatgcc ctgcaaggac
     1021 cgccccaccc cgagctgggc atagccatgg atatgaacat cggcttgaaa actccgacag
     1081 gagcgctctg cagcctgacc ctgtcgttta acaatgatgg cccgttcggt accttttttc
     1141 gctatatctg tgataacggc acttatatcg ccagttatga cgatctcgaa gacggtaata
     1201 gtgaggccat
//
LOCUS       DASCNL010000284         3085 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000637438, whole genome shotgun sequence.
ACCESSION   DASCNL010000284 DASCNL010000000
VERSION     DASCNL010000284.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3085)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3085)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000637438"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            507..752
                     /locus_tag="QF359_03870"
     CDS             507..752
                     /locus_tag="QF359_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86078.1"
                     /translation="MPNITMLDIEELKKTKLGGFIKKSLRHRAPDPAFHAMLGHNPDL
                     SASMYFAWGTVFNTGVVDHKLKEIIRVQLSRTADCNY"
     gene            801..1163
                     /locus_tag="QF359_03875"
     CDS             801..1163
                     /locus_tag="QF359_03875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86079.1"
                     /translation="MIDDGIDNYASSDNFTEAEKIALKYSDLMDTDPDQIDEAFYDEL
                     KQHYTTEEIVELGAFIGFNIGYHTWFGTLGFYPMFTPDGRLVSQEESARIYGDKPVSH
                     TKGPMQRALDSAPESAAE"
     gene            1173..1712
                     /locus_tag="QF359_03880"
     CDS             1173..1712
                     /locus_tag="QF359_03880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86080.1"
                     /translation="MAIIEPIALDQLDPEKFQNRLDLAQKLLVPDSLFLQIMAHAPGY
                     AEALFDAMYQSHALGNVDHALKEIIRVRLALLAKDEYFGFLRSKKATDSGLTEDRIKA
                     GCGDFKNDDQFSSAEKWALTYAKLMYTEPTKVDTAFYDLGKTYYSEPEIMELGAFIAF
                     HYGLQMFMRTLKVLPLNAA"
     gene            1746..2993
                     /locus_tag="QF359_03885"
     CDS             1746..2993
                     /locus_tag="QF359_03885"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO86081.1"
                     /translation="MPNTEIKKFTEREEYGWVMVVVTFTLGVISFGVLSSVGVFLKPL
                     EAEFGWSRGSLSFGYSAITLATAFAGILWGMLADRYGTRWFVLFGAVIIGFPLLLLST
                     MDSVIEFYLYYFLFGALSHATVTGLLYANVGLWFTRNIGLAIGLAVSGGAVGQGTVPV
                     IVRYLINHYDWQTAYSTLGIAYIILAIPIALFVRDSPRLYSVQSHEPPKQRDGTPFPL
                     SPTVVVAWIGTAVVFCCIAMAVPIVHLVPLLTDQGMSPNQAVIVFFTLMATGAFGRIF
                     GGKLADHIGALQSYICMSVLQTAVIFLFPHVQNTILMYALAIIFGLAFSGVMASFLVS
                     VRMMVPANYLARGMAIVSATGWIGMGLGGWQGGIAFDLTGDYIWAYANGSIAGIINLI
                     ILTLFFLHIRRGDGRQRLQAATA"
BASE COUNT          744 a          753 c          729 g          859 t
ORIGIN      
        1 ggctatcaaa gaaagtatga aatgacttaa attagttctt taattccgcc aatgagtccc
       61 caaaaaaaat aagtgatgga tcacatgttt attcacccgg taacatttaa tctcaacaaa
      121 aaatatgccg ataatgccat cggtttttga gatatttttt taaaattttc gaagaaaaag
      181 acggtttagt ttaagctgat tttttccatg atgaacgaac acaagaagcg ggcggtttta
      241 ccgtttatga acccgaagaa acagcgaacg ctgttttaga aaacttcaat ctttattgca
      301 aagaaccatt ggtggcagcg acaacggtac ctttaccctt cgcaggttcg ttcacacctt
      361 gcgggttgat tacttcccta tttcccagat aaattatcat attgctgatt tgttagctga
      421 aattcaatta atctaactcg ggttacttta ttacaatgtt aacttttgaa ttaagtaagc
      481 tgtcccctta attcatagga gccaatatgc ctaatatcac catgcttgat attgaagaac
      541 ttaagaaaac caagcttggc gggtttatca agaagagcct gcgccaccga gcgccggatc
      601 cggcctttca cgccatgctt ggccacaatc cggatttatc ggcttcaatg tattttgcct
      661 ggggcacggt gtttaatacc ggcgttgtcg atcacaaact gaaagagata atccgcgttc
      721 agttatcgag gaccgccgat tgtaactatt gaggtaatgt ccggtctgct tcggcgaagc
      781 agcagggatt aaccgaaggg atgatcgatg acgggatcga caactacgca tcctccgata
      841 acttcactga ggcggaaaag atcgcactta aatattccga tttgatggat accgatccgg
      901 atcaaatcga cgaagctttt tatgatgaat tgaaacagca ctacaccacc gaagaaatcg
      961 tcgagcttgg cgctttcatt ggattcaaca tcggctacca cacctggttt gggaccctcg
     1021 gtttttatcc catgtttact ccggacggcc gcctagtcag tcaggaggaa tcagcccgca
     1081 tctacggtga taagccagtc tcgcacacca aaggccccat gcagcgcgcc ctcgatagtg
     1141 cacccgaaag tgccgcggag taggaattag gtatggccat aattgaaccc atcgcgttgg
     1201 atcagcttga tccggaaaaa ttccagaatc gccttgatct cgcccagaaa ctcctggtgc
     1261 cagacagttt gtttttacag atcatggccc atgcgcctgg ctatgctgaa gccctttttg
     1321 atgccatgta tcaatcccat gcccttggca atgtcgatca cgcgctaaag gaaattatcc
     1381 gcgtgcgtct ggcactgctc gccaaggatg agtattttgg tttcctcaga tcgaaaaaag
     1441 cgacggatag cggcctcacg gaagatcgca taaaagccgg ctgcggggat ttcaaaaatg
     1501 atgatcagtt ctcatctgcc gaaaaatggg cgctgaccta tgccaagctg atgtatacag
     1561 agccaaccaa agtcgatacc gcgttttacg atctcggcaa aacttattat agcgaacccg
     1621 agatcatgga gcttggcgca ttcatcgcct tccactacgg tctgcaaatg ttcatgcgaa
     1681 ccttaaaagt tctgccgcta aacgctgctt gataaactga gccttacgtt ttagtaagat
     1741 caagcatgcc aaacactgaa atcaaaaaat ttaccgaacg cgaagaatat ggctgggtaa
     1801 tggttgttgt cacctttacc ctcggcgtta tttcctttgg cgtgctgtcc tcagtcggcg
     1861 ttttcttaaa gcctctggaa gccgagtttg gctggtcgcg aggcagcctg tcttttggct
     1921 attcagcgat cactctggca accgcctttg ccggcattct ctggggtatg ctcgccgacc
     1981 gctacggcac tagatggttc gtcctgttcg gcgcggtaat aataggtttt ccgctcctgt
     2041 tgctcagcac catggacagt gttattgagt tttacttgta ttacttttta tttggcgctc
     2101 tcagtcatgc cacggtaacc gggctgctct atgccaatgt tgggctttgg tttacccgca
     2161 atatcggcct tgcgatcggt cttgcagttt ccggtggcgc cgtcgggcaa ggtacggtac
     2221 cggttatcgt ccgctacctg atcaaccact atgattggca aacagcctat tcaactctgg
     2281 gtatcgccta cataatattg gcaatcccga tcgcactttt cgtgcgtgat tcgccccggc
     2341 tgtattcggt gcaatcccat gaaccgccta aacagcggga cggcacgccc tttcctttgt
     2401 caccgacggt cgttgttgcc tggataggta cggcggtggt gttctgctgt atcgccatgg
     2461 cggtaccgat tgttcatctg gtgccactcc tcaccgatca aggcatgtct ccgaaccagg
     2521 ctgtgatagt cttttttacc ctgatggcta ccggtgcctt cgggcgcata tttggcggta
     2581 aattggctga ccacatcggc gcattacaga gctatatatg catgtcggtg ctgcaaacgg
     2641 cggtcatatt tttatttccg catgtccaaa acacgatttt gatgtacgct ttggcgataa
     2701 tttttggctt ggctttctct ggtgttatgg cttctttcct ggtcagcgtc cggatgatgg
     2761 taccggccaa ttatctagcg cgtggtatgg ctattgtcag cgcaacgggt tggattggga
     2821 tggggctggg tggctggcaa ggcggcatcg cctttgatct aaccggtgat tatatttggg
     2881 cttacgccaa tggcagtatc gccggaatta taaatctcat aattttaacg ctgtttttcc
     2941 tccatatccg ccgaggcgat ggccgtcagc gtctgcaagc ggcaacggcc tgacttttca
     3001 tccagctaca ctagcaccac ctgggtcaca ttgttgacaa tctgccaagt ttcttgatcc
     3061 ttgataaacg acaaatcgtt atgaa
//
LOCUS       DASCNL010000285         6509 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000640101, whole genome shotgun sequence.
ACCESSION   DASCNL010000285 DASCNL010000000
VERSION     DASCNL010000285.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6509)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6509)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6509
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000640101"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            173..249
                     /locus_tag="QF359_03890"
     tRNA            173..249
                     /locus_tag="QF359_03890"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:207..209,aa:Ile,seq:cat)
     gene            808..1875
                     /locus_tag="QF359_03895"
     CDS             808..1875
                     /locus_tag="QF359_03895"
                     /inference="COORDINATES: protein motif:HMM:NF025587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HJO86082.1"
                     /translation="MLDDWNRKNEEAIMSLVEIEVTIGNDDCVETRELPLMDLAPYYA
                     GEPGAKEALAIELRNAAEEIGFLALINHGVDWSLIESAVAENKRFHALPDEEKMKIAV
                     DQNQRGYIKPKATMIKHSTYHEHTTMDYNETTVFATDFPPDHPGIQAGKQFYGVNQWP
                     ENLPGFRETVETYMAAMEAMGKSLLPIWALALELPEDYFEPFFEHHYTYYRMAHYPPR
                     EAPEENEYALGAHADTGFMTLLPAPDVWGLEIMDKNGIWFRPKKVENVIHINIGQFLE
                     RWSNERFMATPHRVLVPTEDRYTTPVFVNPDLNPVVECLPSCTSPDNPPKYGPESYWD
                     FFKWYMTNSYPHYGGDGFHAA"
     gene            2334..3116
                     /locus_tag="QF359_03900"
     CDS             2334..3116
                     /locus_tag="QF359_03900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO86083.1"
                     /translation="MIIIEDVALYFGGLKAVDGTSFHIRKGTITGLIGPNGAGKTTLF
                     NVIAGVFPPSAGQVFLDGEEITGLKPHQLFAKGLLRTFQIAHEFSSLTVLENLMMVPK
                     GQLGEKLINTWFYRGKVAEQERVTHKRASEVIDFLKLNHLANEPAGNLSGGQKKLLEL
                     GRTMMVDAKVVLLDEIGAGVNRTLLKDIGDAIIRLNQERGYTFCMIEHDIDFISRLCN
                     PVVVMAEGKVLVQGTADKVKSDENVIEAYLGTGLKNKVGVIT"
     gene            3141..3821
                     /locus_tag="QF359_03905"
     CDS             3141..3821
                     /locus_tag="QF359_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO86084.1"
                     /translation="MSGGYGGADILHDCNISVDKGEIAVVVGPNGAGKSTAMKALFGM
                     LNLSQGNVTLGGEDITCLSPQERVKKGMAMVPQTNNVFASLTVQENLEMGAFLRRDDI
                     FQTMEHVFELFPILKDKRNQAAGELSGGQRQQVAVGRALMTTPEVLMLDEPTAGVSPI
                     VMGELFERILEVKQTGIAILMVEQNARQALNIADTGYVLVTGKNKFTNTGEALLASPE
                     VRRSFLGG"
     gene            3829..4842
                     /locus_tag="QF359_03910"
     CDS             3829..4842
                     /locus_tag="QF359_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86085.1"
                     /translation="MTDIMNATVLLSNFVIIPVLAYGSQLALGALGVTLVYGILRFAN
                     FAHGDLMAFGTMITILVTWWLQSIGVSFGPLPTALLALPVAIVFTIAMALFTDRAVYR
                     FYRRKRSTPAIFVIASIGVMFVLNGIVRFIIGPNDQQFADGERFIIKARSFKHMTGLN
                     EGLAFKVSQGLTIGIVFVLVISLFWFLQNTRTGKAMRAYSDNEDLALLSGIDPEKVVM
                     VTWIITAALATIAGTLYGLDKSFKPFTYFQLLLPFFAAAIVGGIGKPVGAIIGGFVVA
                     FSEISITYAYKKFLKYLVPENWAPEGLVQFLSTDYKFAVSFLILVLVLLIRPMGILKG
                     RVI"
     gene            4839..6218
                     /locus_tag="QF359_03915"
     CDS             4839..6218
                     /locus_tag="QF359_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86086.1"
                     /translation="MNNVQRSVLSFALIACLLLIVGLFQSWSLMLSILNLCLISSVMA
                     LGVNIQWGYAGLFNVGTMGFAALGGVAAMLVSKGPVPEAWAVGGWNLIIAAFLFMLTV
                     TLAIITYRRIKRGTLRLLVLSGTIILGIFATRYFSDPAIVDIEAVNPALTGYLGGIGL
                     PILFSWIVGGVFAAGAAWVIGKIALGLRSDYLAIATLGISEIIIAILKNEDWLTRGVK
                     NVAGLPRPVPYEIDLQKSDWFINLTEWLNSNSLYGLSSIERADLLSSSVTEFSGIYVK
                     LCYTGLFAAVLVIILTMSVMALNSPWGRMMRAIRDNETSAAAMGKNITGRHLQVFIIG
                     SAVIGIAGAMLTTLDGQLTPGTYNPLRFTFLIWVMVIVGGSGNNLGSVLGGFLIWLTW
                     IEAEPVGVWLIDGATGWLGGTNPIRLHLMDAAQHMRLFMMGLVLLFVMRFNPGGILPE
                     VTKVGKLSN"
     gene            6304..>6509
                     /locus_tag="QF359_03920"
     CDS             6304..>6509
                     /locus_tag="QF359_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HJO86087.1"
                     /translation="MKKLLLAMFLLTPIMAPSVVAGKDIKIGVILGFTGTIESLTPDM
                     DKSAELAFKEASDSGLLQGGKKIEA"
BASE COUNT         1555 a         1555 c         1667 g         1732 t
ORIGIN      
        1 ctcgcgcaaa ctccggagct ttctggatta ttaggaatta ctgaattcaa attaatgacg
       61 gcgtctcagg tttgaggcgc cgttttttat tcgttaattc gaccttgacc caggcgagtt
      121 taaagctaat ttatcgcact tctggtagcg gtctttactg ctgcagtggt gggggcctgt
      181 agctcagctg gttagagccg gccgctcata acggtctggt cgcaggttcg agtcctgccg
      241 ggcccaccaa ccaccttggc gcgaacctgg caccaaaccg tatatataga caaacctctg
      301 atttctgcgg gttttaagtg tcatgatttt actcattttc cgagcaaatt ccttaagcca
      361 attaacaggg aattaaacag agataacagg gtagcatatt tcaataacag ggatttttct
      421 aaacacgaag ccaaaaaact atccttccac attaagctga tttactcagc agctaccagc
      481 aatggatcgc ggaggccaag gatacgacgc gcattggtgt tcataatttt tccagctcag
      541 gttgggaaat acttatcaag cccagggaag caagaaattc aaaaccaagc cccattactt
      601 tgctgcccag gcgatatagt ttaccgttct cctaacgttc caaataacct aatttttcca
      661 acgtaaaaac aagacgaaat gctgttgaag ttgaaatatc cagtgcacct gcggtttgac
      721 ccaaatcaag gcgcccggcc gccgaatgcc ctatcatgca catcatttaa tcatcgccgg
      781 ccatagcgca gggcgttgcc ttgctcgttg ctggacgatt ggaaccgtaa aaatgaggag
      841 gctattatga gcttggtgga aatcgaagtc acgatcggca atgacgattg tgttgaaacg
      901 cgggaactgc cgcttatgga cttagccccc tattatgccg gcgagccggg ggctaaggag
      961 gcgctagcca ttgagctgcg caacgccgcc gaagagatcg gtttcctggc ccttatcaac
     1021 cacggcgtcg attggagcct aatcgaaagc gcggtcgccg aaaacaagcg cttccatgcg
     1081 ttgcctgacg aagaaaaaat gaaaatcgcc gtcgatcaga accagcgcgg ctatatcaag
     1141 ccgaaagcga cgatgatcaa acattccacc taccacgaac acaccacgat ggattacaac
     1201 gaaaccaccg tgttcgccac cgacttcccg cccgaccacc cgggcatcca ggcgggcaag
     1261 cagttctacg gggtgaacca gtggcccgag aacctgcccg gcttccgcga gacggtggaa
     1321 acctacatgg cggcgatgga ggccatgggc aaaagcctgc tgcccatctg ggcgttggcc
     1381 ttggaactgc cagaagatta tttcgagcca tttttcgagc accattacac ctattaccgg
     1441 atggcccatt atccgccccg cgaagccccg gaagaaaacg aatacgccct cggcgcgcac
     1501 gccgatacgg gcttcatgac cctgttgccg gcgcccgatg tctggggact ggaaatcatg
     1561 gacaagaacg gcatctggtt ccgcccgaaa aaagtggaga atgtcatcca cataaatatc
     1621 ggccagttcc tggaacgctg gtccaacgaa cgtttcatgg cgacgccgca ccgggtattg
     1681 gttcccaccg aagaccgcta tacgacgccg gtgttcgtca atccggacct caacccggtg
     1741 gtcgagtgcc tgccgagttg taccagcccc gacaatccgc cgaaatacgg gccggaaagc
     1801 tattgggact tcttcaagtg gtacatgacc aactcctatc cccactatgg tggcgatggc
     1861 ttccacgctg cataaattat atgtcagcgg cggagtaaaa ttagtccact tttctcagct
     1921 gcgcgaggtg tcgcgggttg tcccggtagt ccataggctg ttgtaaatga attgcgagcg
     1981 gcatcgtcgt gtccgcataa tatcaactaa aggagcacga ctatatttca atcaacgccg
     2041 actatcggac atgatagtaa tatcccaaaa atagcggtga ttgtttctat attttactcg
     2101 actgtttgtt atttggtatc taggttgcgc gggtatatgt tcatacgggg gatgattttt
     2161 taattgttgg gtaagtttta acgtctgggt agaatcaggt atatagtgct gggaaattca
     2221 aaatgaaatt acgcttcatg gagacgttat ctgtcggcgc atcgctttct attgttcagg
     2281 ctaatattaa accgattaaa attgacatcg tcaaatgatg gtggcttacc cccatgatca
     2341 ttattgaaga cgttgccctc tacttcggtg gtttgaaagc ggttgacgga accagtttcc
     2401 atatccgcaa gggtactatt accggtttga tcggccccaa cggcgctggt aagacgacat
     2461 tgtttaacgt tatcgctggg gtttttcctc cgtctgctgg acaggtcttt cttgatggcg
     2521 aggagataac cggccttaaa cctcaccagc tttttgcaaa ggggctcttg cggacattcc
     2581 agatcgccca tgagttttcg tccctgacgg tccttgaaaa cttgatgatg gttcctaaag
     2641 gccaattggg tgaaaaattg attaatacct ggttctatcg gggcaaggtt gctgaacaag
     2701 aacgagtgac tcataaaagg gcttccgaag tcattgattt tctcaaattg aaccatctgg
     2761 caaacgagcc agctgggaac ctctcaggcg gccagaagaa actacttgaa ctgggtcgca
     2821 ccatgatggt cgacgccaag gtggtactgc ttgatgaaat cggggcaggc gtaaaccgaa
     2881 ccctcttaaa agatatcggt gacgctatta tccgcctgaa tcaggaacgt ggttatacct
     2941 tttgtatgat cgagcacgac attgatttta tttccagact gtgcaacccg gtggtggtga
     3001 tggctgaagg aaaggttttg gtgcagggca ctgctgacaa agttaaatcc gacgaaaacg
     3061 tcatcgaggc ttatcttgga accggcctca agaacaaagt tggggtaata acttaagtgg
     3121 gccatttatc ggggaaaaac atgagtggtg gatatggtgg tgcggatatt ctgcacgact
     3181 gtaatatttc cgtcgataaa ggagaaattg ccgttgttgt tggccctaat ggcgccggca
     3241 agtcaaccgc gatgaaggcc cttttcggaa tgctgaatct tagtcagggt aacgtcactc
     3301 ttggcggcga ggatattacc tgcctttcac ctcaagaaag ggttaaaaag ggaatggcaa
     3361 tggtgccgca aacaaacaat gtgtttgcca gcctgacggt gcaggaaaac cttgaaatgg
     3421 gggcatttct tcgccgtgac gatatatttc aaacgatgga gcatgtcttc gagttgtttc
     3481 ctattttgaa ggataagcgt aaccaagcgg ctggcgagct ttccggcggc caacgccaac
     3541 aagttgccgt tggccgtgcc ctgatgacca cgccagaagt gctgatgctg gacgaaccga
     3601 cggctggagt atcacctatc gtcatgggtg aactgttcga acgcattctc gaagtaaaac
     3661 aaactggtat agctattctg atggtcgaac aaaacgcccg acaggcgctt aatatagcag
     3721 atacggggta cgtcctggtc accggtaaga acaagtttac caataccgga gaagccttgc
     3781 tagccagccc cgaagtccga cgttcatttc tgggaggtta gtgtaatctt gaccgatatt
     3841 atgaatgcca ccgtcctgct atctaatttt gtcatcatcc cggtactggc atacggttca
     3901 cagcttgccc tcggggcgtt gggggtcact ctggtatacg gcattctccg cttcgcaaac
     3961 ttcgcccacg gtgatctgat ggctttcggg acgatgatca ctatattggt aacttggtgg
     4021 ctgcaatcca tcggtgtgag ctttggtccg ttgccgacag cactgctggc cctgccggtt
     4081 gctattgttt ttaccatcgc tatggccttg tttaccgaca gggctgtcta caggttctat
     4141 cgtagaaagc gcagcacacc ggcaattttt gtcattgctt cgattggtgt gatgtttgta
     4201 ttgaacggca ttgtgcgctt tatcatcggt cccaatgacc agcaatttgc cgatggtgaa
     4261 cgctttatca tcaaggctcg ctccttcaag cacatgacag gcctaaatga agggctggcg
     4321 tttaaggtta gccaaggtct gaccatcggt atcgttttcg tcctagtgat atccctgttt
     4381 tggttccttc agaatactcg aaccggaaag gcaatgcggg cttattctga caatgaagat
     4441 ctggctcttc tttcaggtat agatccggaa aaggttgtca tggtgacctg gatcatcacg
     4501 gcggcattgg caaccattgc cggaaccctg tatgggttgg ataaaagctt caagcctttt
     4561 acctacttcc agcttttgtt accgtttttt gccgccgcca ttgtcggcgg tattggtaaa
     4621 ccagtcggcg ccattattgg tggttttgtc gtcgccttct cggaaatcag catcacttac
     4681 gcctacaaga aatttctcaa gtatctcgtc ccggaaaact gggcgccaga aggactcgtt
     4741 caattcctgt ccacggatta taagttcgcg gtatcttttc tgatcctagt tctggtgctg
     4801 ttgatccgcc cgatgggtat tcttaaggga cgagtgatat gaacaatgtc cagcgttcag
     4861 tcctgtcttt tgctttaatc gcatgtttgc tgctgattgt tggcttattc caatcatggt
     4921 cgctgatgct gtcgattctc aatctctgcc tgatttcatc ggtgatggcg cttggcgtca
     4981 atatccagtg gggctatgct ggactgttca acgtcgggac tatgggtttt gcggcccttg
     5041 gtggcgttgc cgctatgctg gtctcgaaag gaccggttcc ggaagcctgg gcggtaggcg
     5101 gatggaatct gatcattgcc gcatttctat ttatgcttac ggtcaccctc gccatcatta
     5161 cctatcggcg tattaaacga ggtactttac ggctccttgt cttgtctggg accatcattc
     5221 tcggcatctt cgcaacccgg tacttctccg atcccgccat cgttgatata gaggccgtaa
     5281 atccagccct aaccgggtat ctgggtggta tcggactacc aatcctgttt tcatggattg
     5341 tgggtggtgt atttgcagct ggcgctgcct gggtcatcgg caagatcgcc ttgggactgc
     5401 gttctgatta cttggccatc gccactttgg gtatttcgga aatcattatc gctattttaa
     5461 aaaacgagga ctggttgacc cgtggtgtca agaatgttgc cggattgcct cgtcctgtgc
     5521 cctatgaaat agacttgcaa aagagtgact ggtttatcaa tttgacggaa tggctgaatt
     5581 ccaattccct ctacggacta tcatctattg agagagcaga tcttttatcc tcctctgtta
     5641 ccgaattttc cggtatctat gtgaagcttt gctacaccgg tctgttcgct gcggtcttgg
     5701 tgattattct aaccatgagc gtgatggctt tgaattctcc gtggggacgc atgatgcgag
     5761 ccattcgaga caacgaaacc tccgcagccg ccatggggaa aaacattacc ggacggcatt
     5821 tgcaggtctt tataattggt tccgccgtca tcggtattgc tggagctatg ctgacgaccc
     5881 ttgatggtca gctgacgccc ggcacttata acccgcttcg ttttactttc ctgatctggg
     5941 taatggtgat cgtcggaggt tccggcaata atctcggatc tgtgcttggt ggttttttaa
     6001 tctggttgac ctggatcgaa gcggaacccg taggcgtgtg gctgattgac ggtgcaactg
     6061 gctggctggg cggtacaaac ccgatacggc ttcacctaat ggacgctgct cagcatatgc
     6121 gcctgttcat gatgggactg gttctattgt ttgtcatgcg ctttaatccc ggcggcatat
     6181 tgccggaggt aacaaaggtt ggaaaattaa gtaattgaaa taaaatggga atagtgctta
     6241 tgttggctca attttcaaaa cattaagact ttcaaatagt attgatatca ctaggaggaa
     6301 ataatgaaga aattactatt agcgatgttc ttgctcactc cgattatggc cccttccgtg
     6361 gttgcaggca aagacatcaa aatcggcgtg atcctgggat tcacaggcac aattgagtct
     6421 ttaactccag acatggacaa atcggccgaa ttagctttta aggaagcgtc ggattcggga
     6481 ctattgcagg gaggaaagaa gatcgaagc
//
LOCUS       DASCNL010000286         1101 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000641020, whole genome shotgun sequence.
ACCESSION   DASCNL010000286 DASCNL010000000
VERSION     DASCNL010000286.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000641020"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            128..>1101
                     /locus_tag="QF359_03925"
     CDS             128..>1101
                     /locus_tag="QF359_03925"
                     /inference="COORDINATES: protein motif:HMM:NF013086.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO86088.1"
                     /translation="MAKKIPSEIETDILIIGGGIAGIFAAVTARQKGFEVTLVDKGSP
                     GNSGATPFADTFCVFDEELGHQRQDWIDTVSFNGEYLNNRAWLEKMMDHSKERFQDLK
                     DWGVLDDPKFGIMLRKHVIRSKTNVLERVMMTTLLQVEGRVIGAVGFALDDGKPVTIT
                     AKATIMCAGAGGFKPVGFPIRSLTHDGDAMAYRAGAEITGKEWIDAHGTPAANPAAGR
                     KQFDMTSHGIFMTGQPKHGARALNIDKEIRVHQGGLPPMAGPPPYAFGALPDGTQAPP
                     PPDMQFKKRKMIGGSSAGLAVHKAEGIFSQNNTCASNVPGLYAAGDGLG"
BASE COUNT          267 a          270 c          305 g          259 t
ORIGIN      
        1 taggtatcaa ttagcacctt tctggcatcg catattcagt caaagcatca cgcaattgac
       61 cttcgtcaag gtaacgctcg gcacatttct tatgttgtgc ctgatatctt ggggaagggt
      121 gatttgcatg gcgaaaaaga taccaagcga aatcgaaacc gatatcctta ttatcggcgg
      181 tggcattgcc ggcatttttg ccgctgttac agcgcggcaa aagggttttg aggtaacgct
      241 ggtcgacaaa ggctcaccgg gtaactctgg cgcaactcct ttcgccgata ctttttgtgt
      301 ttttgatgaa gaactcggcc accagcgcca ggattggatc gatacggtca gcttcaatgg
      361 cgagtatctc aacaatcgtg cctggttaga aaaaatgatg gatcactcga aagagcgatt
      421 ccaggatctc aaagactggg gggtgctgga tgatccgaaa ttcgggataa tgcttcgaaa
      481 acatgtcatc cgcagtaaaa ctaacgtgct tgaacgcgtc atgatgacga ccttgcttca
      541 agtcgagggg cgcgttattg gcgctgtcgg ttttgcgctg gatgatggca agccggtaac
      601 gatcaccgcc aaggcaacaa ttatgtgcgc cggtgcgggc ggctttaagc cggtcggctt
      661 tccgatccgc tcgcttaccc atgatggcga tgcgatggct tatcgggctg gcgctgagat
      721 taccggtaag gaatggatcg atgctcacgg tacgccggca gcaaacccgg ctgccgggcg
      781 caaacaattt gatatgacgt cgcacggcat attcatgacc gggcagccta aacatggtgc
      841 acgagcatta aacatcgaca aagaaattag agtccatcag ggtggactgc cgcccatggc
      901 cgggccgccg ccttatgctt ttggagcctt gccggatggc acgcaggccc caccaccacc
      961 cgatatgcaa tttaagaaac gcaaaatgat cggtggctct tcggcgggtc tggcggttca
     1021 taaagccgaa ggcattttct cacaaaataa tacctgcgct tcaaatgtgc ctggactata
     1081 tgcagcgggt gatggtctcg g
//
LOCUS       DASCNL010000287         3696 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000642362, whole genome shotgun sequence.
ACCESSION   DASCNL010000287 DASCNL010000000
VERSION     DASCNL010000287.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3696)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3696)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3696
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000642362"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            45..1838
                     /gene="sdhA"
                     /locus_tag="QF359_03930"
     CDS             45..1838
                     /gene="sdhA"
                     /locus_tag="QF359_03930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HJO86089.1"
                     /translation="MTNSYEIIDHVHDVIVVGAGGAGLRATLGMTAAGLSTACITKVF
                     PTRSHTVAAQGGVGAALGNMQEDNWQWHMFDTVKGADWLGDQDAIEYMCREAVPAVYE
                     LEHFGVPFSRTEDGKIYQRPFGGHMADFGKGASVGRAAAAADRTGHAILHTLYQQCLK
                     HNAEFFIEYFAVDLIMDDDGSCRGVVAWNLADGTIHRFLAHQTVLATGGYGRNYFSCT
                     SAHTCTGDGNGMVLRAGLPNQDMEFIQFHPTGIYGSGCLITEGSRGEGGYLTNSEGDA
                     FMERYAPSAKDLASRDVVSRSMTIEIRENRGVGEKKDHIFLHLEHLGAEVLHRQLPGI
                     TETAKIFAGVDATKEPIPVLPTVHYNMGGIPTNYHGEALRPTADDSEAICPGLMAIGE
                     AACVSVHGANRLGTNSLLDIIVFGRAAAIRAAETVDQNKSVKPADANTGEAAIVRLDR
                     LRHASGSQSTAELRASMQRVMQNNAAVFRTSDVLKEGCSLIDQVADNLKDLKVSDQSL
                     IWNSDLVETLELENLMACSKATIYGAEARHESRGAHAHEDFPDRDDETWMKHTLSWVD
                     DNWNVKLDYRPVHDYTLTDEVDYIEPRARVY"
     gene            1864..2640
                     /locus_tag="QF359_03935"
     CDS             1864..2640
                     /locus_tag="QF359_03935"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HJO86090.1"
                     /translation="MVEFNLPKNSRVIKGQTHTAPDDAINIKKFKIYRYDPDQDKNPQ
                     LDTFEIDMDNCGPMVLDALIKIKNEMDPTLTFRRSCREGVCGSCAMNVDGTNTLACTK
                     DIADIKGDAKIYPLPHLPVIKDLVPDLSTPYAQYTSIEPWVKTDTPAQGSERLQTQED
                     REKLDGLWECVLCFCCQTSCPSYWWNGDRYLGPAILLQAHRWIADSRDEKTGDRLDNL
                     EDPFRLYRCHKILNCTNTCPKSLNPAKAIAETKKLLVERM"
     gene            3255..>3696
                     /gene="zapE"
                     /locus_tag="QF359_03940"
     CDS             3255..>3696
                     /gene="zapE"
                     /locus_tag="QF359_03940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1/ZapE family ATPase"
                     /protein_id="HJO86091.1"
                     /translation="MSNEAQSGPLFTYRARVAAGDLHPDPAQELLAEKLQSLHRALNG
                     YQPSSGQAGWKDRFGLNSSLGRRREKPLQGLYIFGDVGRGKSMLMDLFYESAPVKLKR
                     RVHFHAFLQNVHNRFNDFRENNSEGGDPIPSVAAAIADEAWLLCF"
BASE COUNT          884 a          868 c          980 g          964 t
ORIGIN      
        1 attatcgcgc tcattaaagt tgccttcgga ggctaaaagt caaagtgact aattcatatg
       61 aaatcatcga tcacgttcat gatgtgattg ttgttggagc cggtggagct ggtcttagag
      121 cgacacttgg catgacggct gctggtctta gtacagcttg catcaccaaa gtattcccga
      181 cacgcagtca caccgttgcc gctcaaggtg gcgttggtgc agctctcggt aacatgcaag
      241 aagataattg gcagtggcat atgtttgaca ccgtcaaggg tgccgactgg ctgggtgatc
      301 aggatgccat agaatatatg tgccgtgaag cggttcccgc agtttatgaa ttggagcatt
      361 tcggtgtgcc gttctcacgg actgaagacg gtaaaattta tcaacggccc tttggcgggc
      421 atatggctga tttcggtaaa ggggcctcgg tagggcgcgc cgcggccgct gctgaccgta
      481 ccggtcatgc cattttacat acgctttatc agcaatgcct gaaacataac gctgaatttt
      541 ttattgaata ttttgcagtc gatctgatta tggatgatga cggctcgtgc cgcggcgtgg
      601 tggcctggaa cttggctgat ggcaccatcc atcgcttcct cgctcatcag acggtactgg
      661 cgaccggcgg ctatggccgg aactattttt cctgcacgtc tgcgcatacc tgcaccggtg
      721 atggtaatgg catggtgctt agggccggcc taccaaatca agacatggaa tttatccagt
      781 ttcatccaac cggtatttat ggttcgggtt gtttgataac cgaaggttcc cggggcgagg
      841 gcggctatct taccaactcg gaaggtgatg cctttatgga gcgctatgca ccgagcgcca
      901 aagatttggc gtcacgtgat gttgttagcc gttcaatgac gattgagatt agagaaaacc
      961 gcggcgtcgg cgaaaaaaag gatcacatat tcttgcatct cgaacatctc ggcgccgaag
     1021 ttctgcaccg gcaattgcca ggcatcaccg aaaccgcaaa aatattcgct ggtgttgatg
     1081 caaccaagga gccgatcccg gtattgccga cggtgcatta taatatgggc ggtattccaa
     1141 ccaattatca cggtgaagcg ctgcgcccaa cggccgatga ttcagaggcg atttgcccag
     1201 gcctgatggc gattggtgaa gcggcctgtg tttcggttca tggcgccaac cgccttggca
     1261 ccaattcact gttggatatt attgtctttg ggcgcgctgc tgctattcgc gctgccgaga
     1321 ccgttgatca aaacaaatcc gtcaaaccgg cggatgctaa taccggtgaa gcggcgattg
     1381 tccggcttga tcgtctgcgg cacgccagcg gcagtcaaag cacggctgag ctgcgcgcca
     1441 gcatgcagcg cgtcatgcaa aataatgctg ccgtatttag aacttctgat gttctgaaag
     1501 aaggttgcag tttgatcgac caggtagcgg acaatctaaa agatctgaaa gtcagcgatc
     1561 aatctctgat ctggaattcg gatttggtgg aaacgctgga gctcgaaaac ctaatggcgt
     1621 gttcgaaagc gaccatttat ggcgccgagg cccggcacga atcccgcggt gctcatgccc
     1681 atgaggattt tccggatcgt gatgacgaaa cttggatgaa acataccttg tcttgggttg
     1741 acgataattg gaacgtcaaa ctcgattatc gcccggtgca tgattatact ctgaccgatg
     1801 aggtcgacta catcgagcca cgggctcgag tttactaggg ctgcgagggt caaggataat
     1861 aaaatggttg aatttaactt accgaaaaac tctcgtgtca tcaaaggtca aacccatacg
     1921 gccccggatg atgcaataaa tatcaagaag tttaagatct atcgctatga tcccgatcag
     1981 gataaaaatc cgcagctcga cacctttgaa atcgatatgg ataattgcgg gccaatggtg
     2041 cttgatgcgc tgatcaaaat taaaaacgag atggacccga ccctcacgtt ccgacgctct
     2101 tgccgggaag gcgtgtgcgg ctcttgtgcg atgaatgtcg acggcaccaa cacgctggcc
     2161 tgcaccaagg atattgctga catcaaaggc gatgcgaaga tatatccgtt gccgcatttg
     2221 ccggtgatta aggatttggt gccggatcta tcgacgcctt atgcgcaata tacgtcgatc
     2281 gagccttggg tgaaaacgga tacgccggct cagggcagcg aacgtctgca gacacaggaa
     2341 gatcgcgaaa aactcgatgg tctctgggaa tgtgtcctgt gtttctgctg tcagacatct
     2401 tgcccaagct attggtggaa tggcgaccgt tatttaggtc cggctatatt gttgcaggcc
     2461 catcgctgga tcgctgactc gcgtgatgaa aaaaccggtg accggctgga taatcttgaa
     2521 gatccgttta ggctttaccg ctgtcataag atcctgaact gcaccaatac gtgcccgaaa
     2581 tcacttaacc cggccaaggc cattgctgaa accaagaagc tgttggttga gcgcatgtag
     2641 gccggtacgc cacaatattt tgataaagat ggccgccggt cccccccccg cggctatttt
     2701 ttaaatttgg tagaaattta ttttgaaggt ttctggtttc taatagaaga ttagattccg
     2761 acacgctttt ggatcctgat ttcgcttatg atttttgcca taaatctggg aggcaggttt
     2821 gagtggattt cttagtgttc ttaaggatca atatcacacc tttatggagg cggcatcata
     2881 atttgccgtt tctaaaagcg acgatggcag cctgtgcctt ggttgcgact gcgaatggtg
     2941 aggtgaattt ttccgagcgc gttcgcgtcg actagatcat tgagacccta aaggccttgc
     3001 atgtttacaa tcctcattag gtggttaata tttttttcct gtaaaatttc cccaaggact
     3061 ctgtgttccc cgtatttaat atataagaat tgttaacact aatgaagagt aagctttctg
     3121 tgagaacctc gtgattgacg gtatatcaac aggtatctga ttgaaataac gggcgtcaat
     3181 tctcagtcac atatagttgt agaaggattt taaatcgctt tacttcgcgg gttggcagtc
     3241 ttaagtagcg acttatgtcg aatgaagctc aatctggccc gctttttacc tatcgcgccc
     3301 gcgttgccgc cggtgatctc catccggatc ccgcccaaga gcttttggcg gagaaactac
     3361 aaagcctgca tcgcgcgctc aatggctacc agccgtcttc cggtcaggcc ggctggaaag
     3421 atcgctttgg cctgaacagc agcctcggcc ggcgccggga aaagccactt caaggccttt
     3481 atatttttgg tgatgttggg cgcggtaaat ccatgttaat ggatttgttt tatgaatcag
     3541 ctccggttaa gctcaagcgc cgggttcatt ttcatgcatt tttgcagaac gttcacaacc
     3601 ggtttaatga ttttcgggaa aacaatagcg aaggtggtga cccgatccct agcgtcgccg
     3661 ctgcaattgc cgacgaggcc tggctgctgt gtttcg
//
LOCUS       DASCNL010000288         6428 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000643330, whole genome shotgun sequence.
ACCESSION   DASCNL010000288 DASCNL010000000
VERSION     DASCNL010000288.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6428)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6428)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6428
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000643330"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="QF359_03945"
     CDS             complement(<1..735)
                     /locus_tag="QF359_03945"
                     /inference="COORDINATES: protein motif:HMM:NF013706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJO86092.1"
                     /translation="MKICRFNDNQLGLIQGDNVLDVSQALIVLPDLNWPYPRGDQLIT
                     NLDAVMEVIKDIRDSAPAMPISEVKLLSPVANPMNIVGAPINYQKHIDESNKDDGIVS
                     KRAITNIWDWGMFLKSNSSLVGAGEGVALRFVEDRNDHEVELAVIIGKAGINISAENA
                     LDHIAGYAIGLDMTTRGKELQSFRKSSDTYSVLGPWMVTKDEIDDPNNLDLKISVNGE
                     VRQNSNTDQLVYNVQKCIEYTTTRYTL"
     gene            962..2506
                     /locus_tag="QF359_03950"
     CDS             962..2506
                     /locus_tag="QF359_03950"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86093.1"
                     /translation="MLIGDLLTNSAAAQPEKLAIVAGDQKTTYRELNESANQIANALI
                     DHGLTQDQNISIFSANHFDYPTIYFGAAKSGAVLAHLSTRFSAGELMHVINKTDISTV
                     FVNVSLLENLMSVTENTPELSRIIVFGGPAPAEESIETLESFIADASVSEPDVDIAET
                     DAFAITYTGGTTGFPKGVVVNHASRVIGSVRAEREFDMRPDDAMCCSTPLFHIAGLFV
                     WFQTAIKIGSTCVMMPAWNPDEFIDMVENRGVTSAFLVPTQVNSVISHPEFTAERLKN
                     WRYCNFGGAPTSVAQLERMLAALPDMVWQEQYGQSEAGNLTVRPPEFNLSKSNSIGRA
                     YSDLELAIFDRDDKPLPTGEPGEVVTKGPHKMIEYYKDPQQTKDVFTADGWLKTGDIG
                     YLDEDGFLFVVDRSKDMIISGGENVYPTEIEDALYTHEAVNECAVFGIPDDHWGELPA
                     AHVVLEAGKTITEEELIDYCAAAIARHKRPRLVKFVDSLPKTAVGKIQKNAIKETYWK
                     GRDRSI"
     gene            complement(2556..3026)
                     /locus_tag="QF359_03955"
     CDS             complement(2556..3026)
                     /locus_tag="QF359_03955"
                     /inference="COORDINATES: protein motif:HMM:NF013224.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HJO86094.1"
                     /translation="MELDATDIRILSHLQLDARASNAEIAEIALLSASQCHRRVKRLE
                     EEGFITGYHAEIDAARVGLDINAFVHVTLGTHEENRVKAFVEAIEPIEDIQECYSITG
                     DADYILRVSMPNLTSFSEFIMHQLMPLPMVGNVKSYIAMESVRNSNQLPLTHLP"
     gene            3172..4254
                     /gene="pdhA"
                     /locus_tag="QF359_03960"
     CDS             3172..4254
                     /gene="pdhA"
                     /locus_tag="QF359_03960"
                     /inference="COORDINATES: protein motif:HMM:TIGR03181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HJO86095.1"
                     /translation="MKNLDISYTRYLDPEGQVTTELPAFAQEQSKLIELYRRMTLARR
                     YDGKLTAMQRSGRIPSYAPELGEEAVRVGYATAMKKEDVLLGTYRDTAAMLVRGVTID
                     EDLMFWGGDERGNVFAGPSEDFPLTTPIATQTTQAVGVAYAFKLRDEKRVAVTTIGDG
                     GSSKGDFYEAMNFAGAWHVPVVFIIINNQWAISMPRERQSAAKTLAQKGLAVGIPGEQ
                     VDGNDVIAVCDVVSRALENARSGGGPTVVEAITYRLTDHSTADDASRYRDPDVVSAHW
                     KNEPLIRLRTYLSESQAWTKDDEENLITTIDQEIEDGIAKYEAQEDLPPEAMFDHMFA
                     ELPMDLKDQREAVLAEFSKSEENGYG"
     gene            4247..5236
                     /locus_tag="QF359_03965"
     CDS             4247..5236
                     /locus_tag="QF359_03965"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF014798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HJO86096.1"
                     /translation="MAELTMVSAVCQALGCALKDDKDVVLLGEDVGVNGGVFRATEGL
                     QEIYGADRVIDTPLAEAGIGGVTVGMAAAGLKPVAEFQFMGFIYSAFDQIISHVARLR
                     NRTRGRLSCPLVIRAPYGGGIHGPEHHSESTEAIFAHIPGLRVVIPSSPLRAYGLLLA
                     AIRNPDPVMFLEPKRVYRTVKQEVPDDGEALPLDLCFVLREGGDVTLVSWGAAVAETL
                     AAAETLSGMGIEAEVIDVATLTPLDMPTILSSVEKTGRCVIVHEAPYTGGFGAEIAAR
                     LAEKGLLHLLSPVLRVTGYDTVIPYAKNEHRYLVSENRIIDAVRRAVAFPEEP"
     gene            5267..6373
                     /locus_tag="QF359_03970"
     CDS             5267..6373
                     /locus_tag="QF359_03970"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HJO86097.1"
                     /translation="MKEFNLPDLGEGLQEAEIVAWHVGEGDNVVTDQPLVSVETDKAV
                     VEVPSPFSGKIAKIHGEEGDVVEVGMPLVSFAEGEAKDAGTVVGKQHAGEVQVQEASV
                     EVETKDSRKAGKATPAVRALAQKLGVDLAMVTPTGQGNVITAKDVEAAAADVADAEPL
                     EPLKGVRRAMARRMAHANSEVAATTIMEDADIGDWEGDQDISMRLMRAMAAGCKAEPM
                     CNAWYDSSENGLRVHKKIDLGIAVNTDAGLFVPVMHDIGNRTSDDLRKGFDELRAAVE
                     ARTVPADELRGATITLTNAGPLLGHYTTPIVSPPQVAILGVCRARDEVVARDGQPVVR
                     RMMPLSITFDHRAVSGAEASNFMATVITDLALSE"
BASE COUNT         1589 a         1532 c         1702 g         1605 t
ORIGIN      
        1 cagcgtgtag cgtgtggtcg tatattcaat gcatttctga acattgtaga cgagttggtc
       61 ggtgttggag ttttgccgaa cttcaccatt caccgaaatt ttaagatcaa gattgttggg
      121 atcgtcaatc tcgtctttgg tgaccatcca gggaccaagg acggaatagg tatcggatga
      181 tttgcgaaaa ctttggagct ccttaccccg cgttgtcatg tccaagccaa tggcatagcc
      241 ggcaatatga tcaagggcgt tttcagcaga aatattaata ccagccttac cgatgatgac
      301 cgcgagctca acttcgtgat cattgcgatc ctcaacgaag cgcaaggcca cgccttcgcc
      361 agcaccaact agcgaactat ttgattttag gaacatgccc caatcccaaa tattggtaat
      421 ggcgcgttta gaaacgatgc catcatcttt gttactttcg tcaatatgct tttgatagtt
      481 gatcggcgca ccgacgatat tcatcggatt ggcgactgga ctgagcagtt ttacctcact
      541 gatcggcatt gccggcgcgg aatcgcgaat atccttgatg acttccatca ccgcatcaag
      601 attggtgata agttgatcgc cacgcgggta cggccaattg agatctggta gaacgatcaa
      661 agcttgtgag acatccaata cattatcgcc ttggattaag cccaattgat tatcattgaa
      721 acggcatatt ttcatcggtg gtagttccca tgtgggtaat cgatgtcctg ccttaaggcg
      781 gattctaaaa tcgtcatcct caaggctact tcaaaggcag aatttttatc ttttatggtg
      841 actctgtaat tcatatcttt gtgagttcga accctgctaa gtattttatt ttttgctaat
      901 tatctcttat ggttatcgga caatataata aacatgacaa tactggatag ggaatatcaa
      961 tatgttaatc ggggatttgc taactaattc ggcggcagct cagccggaaa aacttgcaat
     1021 cgtggctggc gatcagaaaa caacttatcg tgagttaaat gaatctgcca accagatcgc
     1081 caacgcactg attgatcacg gtctgaccca agatcaaaat atttcgatct tttcagctaa
     1141 tcattttgac tatcccacaa tctattttgg tgccgctaaa tctggcgccg tgctagctca
     1201 tttgtccacc cgctttagtg ccggcgagtt gatgcatgtc atcaataaaa ccgatatcag
     1261 cacggttttc gttaatgtta gtttattgga aaatttgatg agcgttaccg aaaatactcc
     1321 ggagttatct cgaattatcg tttttggagg tccggcaccg gcggaagaaa gtatcgaaac
     1381 actagaaagt tttattgctg acgcgtcggt aagtgagccg gatgttgata tcgctgagac
     1441 cgatgccttt gcgattacct atactggggg caccacggga tttcccaaag gcgttgtcgt
     1501 caatcacgcg tcccgggtca tcggtagtgt ccgtgctgag cgagagtttg atatgcggcc
     1561 ggatgatgcc atgtgctgtt caacgccact ttttcatatc gctggtctgt ttgtgtggtt
     1621 tcagaccgcc ataaaaatcg gcagcacctg tgtcatgatg ccggcctgga atccagacga
     1681 atttattgac atggttgaaa ataggggcgt gactagtgct tttctcgtac cgacccaagt
     1741 caacagcgtg atcagtcatc cggaatttac cgccgagcga ttaaaaaact ggcgctattg
     1801 caattttggt ggcgctccga cttctgttgc tcagctagaa cgcatgcttg cggccctacc
     1861 ggatatggtg tggcaagagc aatatggtca gtcggaagcc ggcaatttaa ccgtgcggcc
     1921 accggagttt aatctttcga aatccaatag tattggccga gcttatagcg atttggaatt
     1981 ggcgatattt gatcgtgacg acaaaccgtt accgacagga gagcctggtg aagttgtcac
     2041 caaaggccca cataagatga tcgaatatta taaagacccg cagcaaacca aggatgtgtt
     2101 taccgctgat ggctggctaa aaactggtga tatcggttat ctcgacgaag atggattttt
     2161 atttgtggtt gatcgttcaa aagatatgat tatttctggc ggtgaaaatg tctatccgac
     2221 agaaattgaa gacgctctct atactcatga ggcggttaat gaatgcgcgg ttttcggcat
     2281 tccggatgat cattggggcg agttgccggc ggctcatgta gttctggagg caggcaaaac
     2341 gataactgaa gaagaattaa ttgattactg tgcggctgcg atagcccgcc acaaacgccc
     2401 acgattagtc aaattcgttg attcgctgcc caaaaccgcc gttggcaaaa tccagaagaa
     2461 cgccatcaaa gagacttatt ggaaaggtcg cgatcgatca atctaggttg gtttgatact
     2521 gcctaaagtg cgactgctta aattttttaa ccagtttaag gcaaatgcgt taatggaagc
     2581 tggttgctat tcctgacact ttccatcgcg atatatgatt tgacattccc taccatgggc
     2641 aacggcatta gctgatgcat tataaattcg gaaaatgagg ttagattggg cattgacacg
     2701 cgcaaaatat aatccgcatc gccggttatc gaatagcact cctgaatatc ttcaataggt
     2761 tcaatcgcct caacaaatgc tttgacacga ttttcctcat gtgtgcccag agtaacatga
     2821 acaaacgcat tgatatccaa accgacacgt gcggcatcga tttcggcatg atagccagtg
     2881 ataaaacctt cttcttccaa ccgcttgacc cggcgatggc attgcgacgc tgagagcagg
     2941 gcgatctcag caatttctgc attcgaggcc cgggcatcta attgaagatg ggagaggatt
     3001 cttatatctg tagcatctag ttccataata tgcaatattc tctcataatt catcatatga
     3061 acgaaaaata tgtgcatatt ttatgattat tatgggttaa atgcaaatta atttcagcca
     3121 gaatggcgta tcctgttgag attcaaaaac aacccaatcc aacaggtgcc aatgaaaaat
     3181 ctcgatattt cctatacccg ttaccttgat ccggaaggcc aagtgacaac tgagctgcct
     3241 gcttttgccc aagagcaaag taagcttatt gaactatacc ggcgcatgac tttagcccgg
     3301 cgctatgacg gtaaattaac cgccatgcag cgatccggtc gcattcccag ctatgcgcct
     3361 gaactcggtg aagaagccgt ccgtgtcggc tacgcaacag cgatgaaaaa agaagatgtg
     3421 ctattgggta cgtatcgaga taccgccgcc atgcttgtac ggggtgtaac catagatgag
     3481 gatttgatgt tttggggagg tgacgaacgc ggtaacgtct ttgccggtcc ttccgaagat
     3541 ttcccgctaa ccacacctat tgccacgcaa acgacccagg ccgtcggcgt tgcctacgcc
     3601 ttcaagttga gagatgagaa aagagtggct gtgacgacca taggagacgg tggttcttca
     3661 aaaggtgatt tctacgaagc tatgaatttc gccggtgcgt ggcatgtacc ggtggtcttt
     3721 atcatcatca ataaccaatg ggccatttca atgccccgcg aaaggcaaag tgcagcaaaa
     3781 accctggcgc aaaagggcct ggcggttgga attcccgggg aacaagtgga cgggaatgat
     3841 gtgatcgccg tttgtgacgt ggtctctcgg gctctcgaaa acgcccgatc cggcggcggt
     3901 ccgactgttg ttgaagccat tacctatcgc ctcaccgatc attctaccgc cgatgacgcc
     3961 agccgttacc gggacccgga cgtggtcagc gctcactgga aaaacgaacc tctgatccgg
     4021 ctgcgcacct atttatcgga gagccaggcc tggaccaagg acgatgaaga aaatctcatc
     4081 actaccatcg atcaggaaat tgaagacggt attgctaagt atgaggcgca agaggatttg
     4141 ccgcccgagg ccatgttcga ccatatgttc gccgaattgc ccatggattt gaaggaccag
     4201 cgggaagctg tgttggctga attttccaag agtgaggaga acggttatgg ctgagcttac
     4261 gatggtatca gcggtctgcc aggctcttgg ctgcgcgctt aaagacgaca aagacgtcgt
     4321 cctgttggga gaagatgtcg gcgtcaacgg cggcgttttt cgtgccaccg aaggcttgca
     4381 ggaaatttat ggtgctgacc gggtgatcga tacgcccctg gctgaggccg gtatcggcgg
     4441 tgtcaccgtc ggcatggcgg cggcgggact caagccggtg gccgagttcc agtttatggg
     4501 atttatttac tcggccttcg atcagattat cagccacgta gcccgattgc ggaacaggac
     4561 ccgtggacgg ctgagctgtc ccttggttat ccgggctcct tacggcggtg gtatccatgg
     4621 tcccgaacac cactcggaaa gcaccgaagc aatcttcgcc catattccgg ggctgcgggt
     4681 cgtcatcccg tcatcacccc tcagggctta tggcttgctg ctggcggcga tcagaaatcc
     4741 tgacccggtc atgttccttg agcccaagcg cgtctaccgc accgtcaagc aggaagtccc
     4801 cgatgacggt gaagccttgc ctctggattt gtgcttcgtc ctgcgagagg gcggcgatgt
     4861 gaccttggtt agttggggag ctgcagtggc ggaaacctta gcggcggcgg agacactgtc
     4921 gggaatgggg attgaggccg aggtgattga tgtcgccact ttgacgccgt tggatatgcc
     4981 gactatcctc agttcggtgg agaaaacagg ccgttgtgtc attgtacatg aggcccctta
     5041 taccggcgga ttcggagcag aaattgcggc gcgactggcc gaaaaagggc tgcttcatct
     5101 cttatcaccg gttttaaggg taacgggtta cgacaccgtc attccttatg ccaaaaacga
     5161 acatcgctat ttggtcagtg aaaatcgcat tatcgacgcc gtccggcgtg cggtcgcctt
     5221 tcccgaagaa ccataagcta actaatccag taaaaaggaa ttacctatga aagaatttaa
     5281 tctacctgat ctcggcgaag gccttcagga agcggaaatt gtcgcctggc acgtggggga
     5341 gggtgacaat gttgttaccg accaaccctt ggtctcagta gaaaccgaca aggcggtggt
     5401 tgaggtgccg tcgccttttt ccggtaaaat tgccaagatt catggtgaag aaggggatgt
     5461 cgttgaggtt ggtatgcctt tggtgagttt tgctgagggc gaggctaaag atgccggcac
     5521 ggtcgtcggt aaacaacatg cgggggaagt tcaggttcaa gaagcatcgg tcgaggtgga
     5581 gacaaaagat tcacgcaaag ctggtaaagc cactccggcg gtgcgagcgc tggcgcagaa
     5641 attaggcgtc gatctggcta tggtgacacc gactggccaa ggcaatgtga tcacggccaa
     5701 agacgtcgaa gccgctgccg ctgatgtagc cgatgccgaa ccgttagagc cacttaaagg
     5761 cgtccgtcgc gccatggccc ggcgcatggc ccacgccaac agcgaagttg ccgcaacgac
     5821 gatcatggag gacgccgata tcggtgactg ggaaggcgat caggatattt ccatgcgcct
     5881 gatgcgcgcc atggccgccg gctgcaaggc cgaacccatg tgtaacgctt ggtatgacag
     5941 cagcgaaaac ggcttgcgtg tccacaagaa aattgatctg ggaatcgctg tcaatacgga
     6001 tgctgggctg tttgttccgg taatgcatga tatcggcaat cggacatctg acgatctcag
     6061 aaaaggcttc gatgaattgc gggccgccgt tgaagcccgc acggtgccgg cggatgaact
     6121 gcggggcgcc actattacgt tgaccaacgc tggtccctta ctgggccatt atacgacacc
     6181 tatcgtctcg ccgccccaag tggcgatcct gggtgtttgc cgggccaggg acgaagtcgt
     6241 tgcccgcgac ggccagccgg tcgtccggcg catgatgcct ttgtccataa ctttcgatca
     6301 tcgggctgtc tctggcgccg aggcctctaa tttcatggcc accgtcatta cggatttggc
     6361 cctatctgaa taggagctaa ttaccaacaa tggctcggcc gatagtatct tcatcggtgt
     6421 cgaaccaa
//
LOCUS       DASCNL010000289         1614 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000645786, whole genome shotgun sequence.
ACCESSION   DASCNL010000289 DASCNL010000000
VERSION     DASCNL010000289.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000645786"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..193
                     /locus_tag="QF359_03975"
                     /pseudo
     CDS             1..193
                     /locus_tag="QF359_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633565.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
     gene            complement(274..1521)
                     /locus_tag="QF359_03980"
     CDS             complement(274..1521)
                     /locus_tag="QF359_03980"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO86098.1"
                     /translation="MATQSKFGGIGRVLRHRNYRYYWMGGAVSVLGFWLHKLALGWLT
                     WDLTHSPLWLGIIGFSATFVTAVIAPFAGAVADRFGLRKTAFIALSCSSANAMAIAII
                     TINGAMKVELLVILTLVQGITLSFDLPARQALVHHIVDREDLSAAIALNTTTFHVGAF
                     IGPALFGVVTSIWDLPAAFFINSLSFFAFAIALAAMKLEPRPPRKKDGSTIFGDMVDG
                     VRYTFNHPGIFALLSLTAASHLLLRPYIDLLPAFADTIFGLGEGGFAALAGASGLGSL
                     VGGTWLAIRGRTEGLTRLLTFGMLGSAMAMFVFATTNIYPLALACMTFLGFSLVTMAV
                     TSQSLVQNAVDTTKRARVISFSTGMAVGFPALGALILGSLGDVLGVQAPVLGAAALCM
                     TYWLWASRRLRWQSDLMEADPNK"
BASE COUNT          495 a          402 c          370 g          347 t
ORIGIN      
        1 atcgaaaccg taaaatagtt caacccaacc aagggatatg gcttcattat ccctgaggac
       61 ggcgataggg atatcttcgt acgccgtact gactgccgga ttacagggcc taaaggaagg
      121 acaaaaggtt aattacgaag ttgctgaaga accaaagggg ttgaaggctt tagatatcgc
      181 tatagccgat taagaattca tacagagaga cttttttaaa atttgtaaac ttaagcaccc
      241 actgaatttt ttcagtgggt attttttatc aagttattta ttcggatcag cttccattag
      301 atcagactgc caccgcaaac gccgtgacgc ccatagccaa taggtcatac acagcgccgc
      361 tgcacctaaa accggcgcct gtacgcccaa tacatcgccg agtgatccaa ggatcagtgc
      421 accaagggct ggaaaaccga ctgccatccc cgtgctgaag ctgataacgc gggcgcgctt
      481 ggtcgtatcc acggcatttt gcaccaagct ttgtgacgtg acagccattg tcaccagaga
      541 aaatcccaaa aaagtcatac aagccagtgc cagcggataa atattggtcg tggcaaaaac
      601 gaacatcgcc attgctgaac ccaacattcc gaaagttaac aatctggtta gtccttctgt
      661 tctgcctcgg atcgctaacc aggtgccacc gaccaaagat cctaaaccgg aggcaccggc
      721 tagtgcagca aaaccacctt cgcccaatcc gaaaattgta tctgcgaatg ctggtaagag
      781 atctatgtaa ggccgcaaga gcaaatgcga ggccgctgtc aaactaagta aagcgaagat
      841 gccaggatga ttaaaggtat agcggactcc atccaccata tcgccaaaaa ttgttgagcc
      901 gtctttcttt cggggtggac gcggctcaag tttcatcgct gccagtgcaa tcgcaaaagc
      961 aaaaaaagac agtgaattga tgaaaaatgc cgccggtaaa tcccagatac tagtcaccac
     1021 accaaaaagg gccggaccaa taaaagcgcc gacatgaaac gttgttgtgt taagcgcaat
     1081 tgctgcagac aaatcttctc gatcaacaat gtgatggacc aaggcctggc gggccgggag
     1141 atcaaacgac aaagtaatac cttgcacaag agttaaaatc accagcaatt ccaccttcat
     1201 cgcaccatta atagtgatga tcgcaatagc catggcattc gcggaagaac acgaaagcgc
     1261 aatgaaggct gttttacgca aaccaaagcg gtcagcgaca gcgccggcaa aaggcgcgat
     1321 aacggcagtt acgaaagttg ccgaaaatcc aataataccg agccaaagcg gcgaatgggt
     1381 aagatcccag gtcagccagc caagcgccag cttatgtagc caaaagccga ggacggatac
     1441 cgcacccccc atccagtagt aacgataatt gcgatgtcgc agaactcggc caataccgcc
     1501 gaacttcgat tgagttgcca tttgttatgt tctttttggt tattcagacc gatgacattt
     1561 taaatgtcac tttaacggct aattttcaac cggagtctcc aattattcgg catg
//
LOCUS       DASCNL010000290         1694 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000645995, whole genome shotgun sequence.
ACCESSION   DASCNL010000290 DASCNL010000000
VERSION     DASCNL010000290.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000645995"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="QF359_03985"
     CDS             <1..300
                     /locus_tag="QF359_03985"
                     /inference="COORDINATES: protein motif:HMM:NF025054.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJO86099.1"
                     /translation="GYRQVAAHLGDEIVGVIGYRFAEDLAWGRTLYVDDLVVDENHRG
                     QGVGEALMKGGEMEAERRDCQTLRLCSGLTREQAHRFYEGIDMDKTSYSFVKKLI"
     gene            366..>1694
                     /locus_tag="QF359_03990"
     CDS             366..>1694
                     /locus_tag="QF359_03990"
                     /inference="COORDINATES: protein motif:HMM:NF024832.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HJO86100.1"
                     /translation="MTFTSTILRNIKILTAAQIIASVAGLFSSALLARALGVDGFGVL
                     GFGMAFLSLLGIVASLSTDIYGTREIARNPDKADSISSPILGLRLTLSIFAYAVFIVI
                     VLTLDRSQTEKTVLLVQASGIFISIFVLDFVFQGLERMGINGLRQILTALMTLICVYL
                     FVRAPEDILIAAIIPIAAGTVAVGVIWLYARHSIGGIRLSFARDRWRQILAVSVPLAI
                     SGIMHTIIFNTDAVMLGLMSTNQQTGLYVSAFKIVGLTMIPAGLLTAPFFPSLSAGWD
                     DQQTRLDRSRTFAISVLIISLPLVVFIAIYPDLILRILFGQAYSEAETTLLILMMSMV
                     AMHLRIIYGPPLVAWNEERYHMVATIIGAVLNVLLNFLLIPKYGIIGAAFASLISHAV
                     ISVLIAYKFYAKASTIHISVISKTVICIAVAAASIWWLSINFGDSFVQSVF"
BASE COUNT          412 a          353 c          410 g          519 t
ORIGIN      
        1 ggatacaggc aggtcgcggc gcatcttggc gatgaaatcg ttggcgtaat cggttatcga
       61 tttgctgaag atttggcctg gggacgcact ctttatgttg acgatcttgt cgttgacgaa
      121 aatcatcgcg gccagggcgt tggcgaagct ttgatgaaag gtggcgaaat ggaagccgaa
      181 cgccgggatt gccaaaccct ccggctttgt agcggtttga cgcgcgaaca agcccatcga
      241 ttctacgaag gaattgacat ggacaaaacc agttattctt ttgttaaaaa attaatctaa
      301 agttgttatt caaatttcct gatataaaaa cgcgctagac tattgaggaa atttagaaat
      361 taacaatgac atttacctca accatattac gcaacattaa aattctaacg gcggcgcaaa
      421 ttattgcgtc ggtggcagga cttttttcat cggcgttgct ggcgcgagca ctaggtgtgg
      481 acggttttgg cgtacttggt tttggtatgg cttttttgtc attgctgggg attgtagcta
      541 gtcttagtac agatatctat ggaacacggg aaattgcgcg aaaccctgat aaagcggatt
      601 cgataagcag ccctatttta ggccttcgcc taaccctatc aattttcgcc tatgccgtgt
      661 ttatcgtaat tgttttgaca ttagatcgta gtcaaacgga aaagaccgta ttgttggtgc
      721 aggccagtgg aatttttatc tctatttttg ttctcgattt tgtttttcaa ggattggaac
      781 gaatggggat aaatggcctg cggcaaattt taactgcact gatgacgctt atctgtgtct
      841 atttgtttgt gcgcgcacct gaagatatct taattgcggc aatcatacca attgctgccg
      901 gaactgtagc tgttggcgtt atttggttat atgcccggca cagtatcggc ggcatcaggc
      961 tttcctttgc gcgagatcgc tggcggcaaa tattggcggt atcagtgcca ttagcgatct
     1021 ccggcattat gcacacaatt atttttaaca ccgatgccgt tatgctcgga ctgatgtcga
     1081 ccaaccagca aaccggccta tatgtcagcg cttttaaaat tgttggtttg acgatgatac
     1141 cggcgggatt gctgacagca ccgttctttc ccagcctatc agccggctgg gatgatcagc
     1201 aaacgcgctt agatcgcagt agaacgtttg ccatatcggt tctgatcata agcctgccac
     1261 tggttgtttt tattgcgatc tatccggacc ttattttgcg gatcttattt ggccaagcct
     1321 attcggaagc agaaacaacg ctgcttatat tgatgatgag catggtggca atgcatctgc
     1381 gtattattta tggccccccg ctcgtggctt ggaatgaaga gcggtatcat atggtagcca
     1441 ccattatcgg cgccgtactt aacgtcttgc tgaatttttt actaatccca aaatacggca
     1501 ttatcggtgc agcttttgcc tcactaatca gtcatgcggt aatatcagtt ctgatagcct
     1561 ataaatttta tgccaaagca tcgacgatac atattagcgt catcagtaaa acggtaattt
     1621 gcatagctgt ggctgctgcc agtatctggt ggctatcgat taattttggc gatagttttg
     1681 tgcaatctgt tttt
//
LOCUS       DASCNL010000291         1154 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000647394, whole genome shotgun sequence.
ACCESSION   DASCNL010000291 DASCNL010000000
VERSION     DASCNL010000291.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000647394"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="QF359_03995"
     CDS             complement(<1..229)
                     /locus_tag="QF359_03995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86101.1"
                     /translation="MTNVATWDAETDSCDVGSTSIHRIVDLESVPFAANMIYPEAASA
                     EMQELSSHLGTHHFDQNSFDLLLSFHTFLMRN"
     gene            complement(226..1005)
                     /locus_tag="QF359_04000"
     CDS             complement(226..1005)
                     /locus_tag="QF359_04000"
                     /inference="COORDINATES: protein motif:HMM:NF019342.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HJO86102.1"
                     /translation="MSNSLPLPFIGVPTSTMQIPGSQFFAHVSGKRYISSLTEFAKCM
                     AVQIPSLGEDYDYADLVKRFDGIMLTGGRANVEPHNYDGPPFPEDEAIDPDRDATVLR
                     IVPACIEAGVPIFGICRGLQEMNVALGGSLYYRVNEVPGKNDHRMPRGDDVSDEDIYG
                     LRHPVKLTEDGLFQGLIGESETMVNSLHGQGIDQLGEGLAVEAVSDDDIVEGIRIEGH
                     PNFAVAVQWHTEFHPEREEHLLSRRLYEAFGEAALERAKNR"
BASE COUNT          292 a          292 c          287 g          283 t
ORIGIN      
        1 cgttgcgcat caggaaagta tgaaagctga gaagcagatc aaatgagttt tgatcaaaat
       61 gatgcgtacc aaggtgtgaa gataattcct gcatctccgc cgatgcggct tctggataaa
      121 tcatgttggc agcgaagggt acgctttcca gatcgacgat gcggtgaatg cttgtgctac
      181 cgacgtcaca ggagtcagtt tcagcatccc atgtcgcgac gtttgtcatc gattttttgc
      241 tctctctaat gccgcttcgc caaaagcttc ataaagcctg cgggacagta ggtgctcctc
      301 gcgttccggg tggaattcag tatgccattg aacggcgaca gcaaaattcg gatgaccttc
      361 gatgcgaatg ccttcgacaa tatcgtcgtc agaaaccgct tccacagcta aaccctcacc
      421 gagttggtcg ataccctgac cgtgcaagct gttgaccatg gtttcactct cgccgataag
      481 tccctggaat aagccatctt cggtaagctt caccggatga cgcaacccat agatatcttc
      541 gtcactgacg tcatcacccc gcggcatccg gtggtcattt ttacctggta cttcatttac
      601 ccggtaatac agcgaaccgc caagggcaac attcatttcc tgcaggccgc ggcaaatccc
      661 gaagataggt acaccagctt cgatgcaagc gggaacgatg cgtaaaaccg tggcatcgcg
      721 gtccggatca atcgcttcat cctccggaaa gggagggcca tcgtaattat gcggttccac
      781 attagcgcgt ccaccagtta gcataatacc gtcgaaccgt ttgaccagat cggcatagtc
      841 gtagtcttcg ccaagggatg gaatttgcac ggccatacat ttggcaaatt cggtcagcga
      901 tgagatgtaa cgcttgccgc tgacgtgagc aaaaaactga ctgcccggta tttgcattgt
      961 tgatgttggt acaccgataa acggcagagg aagggagttt gacatgatat ccaaaagcgg
     1021 ccttaaacag aagtaatcgc cattttaatc ggcccttcag cgcgattgtg gatgaactga
     1081 tcgagatact ctttaccgga attgttaacg tctgcggttg ggccgcacca gataattttg
     1141 acgtcataga tcat
//
LOCUS       DASCNL010000292         5965 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000651744, whole genome shotgun sequence.
ACCESSION   DASCNL010000292 DASCNL010000000
VERSION     DASCNL010000292.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5965)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5965)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5965
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000651744"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(259..780)
                     /locus_tag="QF359_04005"
     CDS             complement(259..780)
                     /locus_tag="QF359_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86103.1"
                     /translation="MIEKCRDWRPDIIFQQMPDSDLNSKPGTFATIKEQLPVTIFSQH
                     CDAFDKRAMERAAAYYDQIDINVVNDYYSVYPQFFGCSSRFLDTWTPQDPALFHKRLV
                     DWQLAVSFAGSTDYYPDRQAALELLQQSGLPIHISGGFGDTHLPIEVYATLLQHSNIT
                     LNFSAISGLYLIK"
     gene            complement(805..972)
                     /locus_tag="QF359_04010"
     CDS             complement(805..972)
                     /locus_tag="QF359_04010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86104.1"
                     /translation="MAGKTNKPKFLFVTEKWAKCNPQDSLSNIHHNFIGSLAATGLAN
                     WQVLPHDEVVV"
     gene            complement(988..2430)
                     /locus_tag="QF359_04015"
     CDS             complement(988..2430)
                     /locus_tag="QF359_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HJO86105.1"
                     /translation="MGKATGFMEFEPRDRTYRSAEERVKHYNEFVIPLSEKQLSRQGA
                     RCMDCGIPYCHNGCPVNNIIPDWNDLVYRGNFRKAIEVLHSTNNFPEFTGRICPAPCQ
                     EACTLNLDDQPVTIKTIECATIDKAWEKGWIKPQLPEHKTGKKVAVIGAGPAGMAAAQ
                     QLARAGHDVTLFEKNAKIGGLLRYGIPDFKMEKHLIDRRQVQMEQEGVTVRTNMNIGI
                     DVTTDELDKEFDAIILSGGSESPRNLPVPGRETNGIHFAMDFLTQQNRRVSGEDRDEV
                     KEISAEDKNVVVIGGGDTGSDCVGTSFRQGAASVTQLEIMPQPPEKENKRLTWPNWPM
                     KMRTSTSHEEGVTRDWSITTKNFIVSKGSVTGMQTVRVEWQNDEDGRMQMSEVDGSAD
                     SLPADLVLLAMGFVHPTHEGLIEDLKVELDESGNVKANTDDYQTSLPKVFAAGDIRRG
                     QSLVVWAIREGRQCARAVDEFLMGSTELPR"
     gene            complement(2433..>5965)
                     /gene="gltB"
                     /locus_tag="QF359_04020"
     CDS             complement(2433..>5965)
                     /gene="gltB"
                     /locus_tag="QF359_04020"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HJO86106.1"
                     /translation="LRPARYVVTDDDLCIMGSEVGVLDIPDEKIVEKWRLQPGKMFLI
                     DLEEGRIIDDAELKDNLSNAQPYQNWLDETQIRLEDLPADVELMPLDHQTLLDRQQAF
                     GYTQEDLKFYLLPMATSGQDPIGSMGRDTPQAVLSDRPKMLFDYFKQAFAQVTNPPID
                     PIREELVMSLVSLIGPRPNLLDLETGGKHMRLEVRQPILSNVDLEKIRHIDSRNGSFR
                     SVTLSICYAASDGAAGMKAALDSLCKEAKEKVLEGHNILILSDRGLSADQIAIPSLLA
                     TAAVHHHLIREGLRTESGLVIETGEARQVHDFCLLAGYGAEAVNPYLAFDVITDARDQ
                     LPDDLIITESHTRYIKAVDKGILKVMSKMGISTYQSYCGAQIFDAIGLRDEFIEAYFT
                     NTASAIEGIGLEEIAQETVTRHELAFGNSAILESALDVGGDMAYRIRGEEHMWTPETI
                     SKLQHSARGNLPDTYNEFATAMNDHSRKLKNLRGLFEFDFDGNESIPLNEVEPASEIV
                     KRFVTGAMSFGSISFEAHTNLAIAMNRIGGKSNTGEGGEEPERYVPLSSGDSMRSAIK
                     QVASGRFGVTVEYLRNSDEIQIKMAQGAKPGEGGQLPGHKVDETIARVRHSTPGVGLI
                     SPPPHHDIYSIEDLAQLIHDLKNVNPKARISVKLVSIVGVGTIAAGVSKAHADHVLIS
                     GMDGGTGASPITSVMNAGSAWEIGLAETHQTLVLNKLRGRICVQADGGIRTGRDVAVA
                     ALLGADEYGIATASLIASGCVMMRKCHLNTCPVGIATQDPELRKKFKGKPEHVVNYMF
                     FVAEEMRQIMAELGVRTVNEMVGRSDLLQMNKAINHWKANGLDLSRILYKPDMGPDVA
                     VYHSEDQDHGLDKALDNKLIEDAKPALETGQAVKIETEVANINRTVGAMLSGEIAEKY
                     GQAGLPDDTVYIKAKGSGGQSFGAFLSKGVTIELEGDANDYIGKGLSGGHLVVYPPKV
                     SKFVAEENIVIGNVALYGAIDGECYFRGVAGERFAVRNSGATAVVEGVGDHCCEYMTG
                     GVVVVLGETGRNFAAGMSGGIAYVLNESHDFDIRCNMAMVDLEPISDEDRMLEDHGHQ
                     RGDLETHGRVDIMDDMTGYDALRLRKLIENHMHSTDSDRARGILDNWEDYLPKFVKVM
                     PVDYRRALQEMQARADEEAEPSEIGVAVGD"
BASE COUNT         1439 a         1538 c         1475 g         1513 t
ORIGIN      
        1 agctcgactc agcgtactgc attatttttt accagaaatt ttctgtagcg taattagtga
       61 gaacatattc atgtccagtg gcagatattt tttttctctc catcatgggc gataaataat
      121 tgatttttat tcaagctcag ctgtggtttc aaactcaaca tagtagacat ccggcgttag
      181 ccatttgcgc gttttgccac cggcttcttc cgttaataaa cagccagaaa acaatgcccc
      241 catcgaccgt cctttgcatt atttgatcag atagagtccg gatatcgctg aaaagttgag
      301 ggttatattt gagtgctgga gcagggtcgc atagacctca attggcaaat gcgtatcacc
      361 aaagccgccg gaaatatgta tgggtaagcc gctttgctgg aggagttcca aagcagcctg
      421 acgatccggg taataatcgg tgctgccagc aaaactgaca gcaagttgcc agtcaactaa
      481 tctcttatga aagagggcag ggtcctgcgg agtccaggtg tcgagaaatc tcgaactgca
      541 accaaaaaat tgtggataga ccgagtagta atcattcaca acgttgatgt cgatttgatc
      601 atagtaggcc gcggcgcgtt ccattgctcg cttatcaaag gcgtcgcaat gctgggagaa
      661 aatagttaca ggtaattgct ctttgatggt agcgaatgtt cctggttttg agttgagatc
      721 ggagtccggc atctgctgga aaataatatc aggacgccaa tcccggcact tttcgatcaa
      781 cgccgcatcg gcacgctcac cagattaaac cacgacttca tcatggggca acacttgcca
      841 gttagccaaa ccggttgcag caagtgagcc gataaaattg tggtggatat tcgatagcga
      901 atcctgggga ttacatttcg cccatttttc agtgacgaaa aggaacttcg gtttattggt
      961 tttgcccgcc aattttatct ccgctcgtta gcgcgggagt tcagtgcttc ccatcaggaa
     1021 ttcatcaact gcgcgtgcac attggcggcc ttcgcggatg gcccaaacaa ccaaggattg
     1081 gccgcggcgt atatcaccgg ccgcgaaaac tttgggcaga gaggtctgat agtcgtctgt
     1141 attggcctta acattgccgc tttcatccag ctcaactttt aaatcttcaa ttaagccttc
     1201 atgagtgggg tgaacaaagc ccattgcaag cagtaccaaa tcggccggca aactgtcggc
     1261 agagccatcg acctcggaca tttgcatgcg gccgtcttca tcattttgcc attcaacgcg
     1321 aaccgtctgc atacccgtga cgctgccttt agaaacgata aagttcttag tcgtaatcga
     1381 ccagtcgcgc gtcacccctt cttcatggga tgtcgacgtg cgcattttca ttggccaatt
     1441 cggccaggtc aggcgtttat tctctttctc cggcggttgt ggcataattt caagctgagt
     1501 aacactggcc gcaccctggc ggaacgaggt accgacgcag tcagaaccgg tgtcaccacc
     1561 gccaatgaca acaacatttt tgtcctctgc tgaaatttct ttgacctcat cacggtcttc
     1621 acccgatacc cggcgatttt gctgggtcag gaaatccatc gcaaaatgaa tgccattggt
     1681 ttcccggcca ggcactggca agttacgcgg actttcagag ccacccgaaa gaatgatggc
     1741 atcaaactct ttatcaagct catcggtggt tacatcgata ccaatattca tgttggtacg
     1801 caccgtgacg ccttcctgtt ccatctgaac ttgacggcgg tcaatgagat gcttttccat
     1861 tttaaaatca ggaatcccgt agcgcagtag gccgccgatt ttggcgtttt tctcaaacag
     1921 tgttacatcg tgaccggcgc gggcgagctg ctgggcggct gccataccgg caggcccagc
     1981 gccaatgacc gcgacttttt tacccgtctt gtgttccggg agttgcggtt ttatccaccc
     2041 cttttcccaa gctttatcaa tggtagcgca ttcaatggtc ttaatggtaa ctggttgatc
     2101 atccaaattg agcgtacagg cttcttggca gggagccggg caaatacgac cagtaaattc
     2161 cgggaagttg ttagtagaat gcagcacttc tatggctttt ctaaaattgc cgcgatagac
     2221 cagatcattc caatcgggaa taatattgtt gaccgggcag ccattgtggc aatagggaat
     2281 accgcaatcc atgcacctgg caccctggcg ggacaattgt ttctcgctta aaggaatgac
     2341 aaattcgttg taatgtttga cgcgctcttc cgctgaccga taggtacggt cacgcggttc
     2401 aaattccata aatccagtgg ctttgcccat gattagtctc ccaccgcaac gccgatttct
     2461 gatggttcgg cttcttcatc ggcccttgcc tgcatctctt gcagtgcccg gcggtagtca
     2521 acaggcataa ctttgacaaa tttcggcagg taatcttccc aattatcgag aatcccccgc
     2581 gctctatcgc tatcggtaga gtgcatgtga ttttcaatta atttgcgtaa ccgcagggca
     2641 tcatagccag tcatatcgtc catgatatca acccggccat gagtttcgag gtcaccacgt
     2701 tgatgaccat gatcttccag catgcggtct tcatcactaa tcggctcaag gtcgaccatc
     2761 gccatgttgc agcgtatatc aaaatcatga gattcgttga ggacataggc aatgccgcca
     2821 ctcataccgg cagcaaagtt acggcctgtc tcgcccagta caacgacgac gccgccagtc
     2881 atatattcac agcaatgatc gcctacacct tcgacaaccg ccgttgcacc tgagttacga
     2941 actgcaaagc gctcgccggc aacgccccgg aaataacatt cgccgtcaat cgctccgtag
     3001 agcgccacat taccgatgac gatgttctct tcggcaacga atttggatac ttttggagga
     3061 tagacgacca aatggccacc gctcagacct ttgccgatat aatcattagc gtcaccttca
     3121 agttcaatgg tgacgccctt ggagaggaat gcgccgaagc tttgaccgcc cgagcctttg
     3181 gctttgatat agacggtatc gtccggcaat ccagcctggc catatttttc ggcaatctca
     3241 ccggacagca tggcacccac ggtccggttg atattggcga cttcggtctc aatcttaaca
     3301 gcctgaccgg tttccagcgc tggcttagca tcttcaatca gtttgttatc gagcgcttta
     3361 tcgaggccgt gatcctgatc ttcagagtga tagacggcga catccgggcc catatccggt
     3421 ttgtatagga tgcgtgagag atcaaggcca ttggctttcc aatgattgat ggctttgttc
     3481 atctgcaaga gatcagaacg gccgaccatt tcattgacgg tgcgaacacc gagctcagcc
     3541 attatttgac gcatctcttc cgcgacaaag aacatatagt tcacaacgtg ttcgggtttg
     3601 cctttaaatt tcttgcgaag ttcagggtcc tgcgtcgcga tgccgaccgg gcaggtgttg
     3661 agatggcatt tccgcatcat gacacagccg gaagcaatca gcgatgccgt cgcaataccg
     3721 tattcgtcgg cgcctaagag ggcggcaaca gcaacatccc ggccggtgcg aataccgcca
     3781 tcggcttgca cgcagatgcg gccccgaagt ttgttcaaga ctagtgtttg gtgggtttcg
     3841 gcaaggccga tttcccaggc tgaaccggca ttcataaccg acgtaattgg gcttgcccca
     3901 gtgccgccat ccatgccgga aatcagcaca tgatcagcgt gggccttgga gacaccagcg
     3961 gcaattgtgc cgacaccaac gatcgagacc agcttcacac tgatgcgagc tttcggatta
     4021 acgttcttca aatcatggat aagctgggct agatcttcaa ttgaataaat atcgtgatgc
     4081 ggcggtggtg aaatcaaacc aacgccgggt gtagagtgac gcacgcgggc aatcgtttca
     4141 tcgactttgt gaccgggcag ttgaccgcct tcgccgggct tcgcgccttg tgccattttg
     4201 atttggattt catcagaatt ccggagatat tcaacggtta cgccaaagcg gcctgaagcc
     4261 acctgcttga tagctgagcg catcgaatcg ccactggaaa gcggcacata ccgttcaggc
     4321 tcctcgccac cttcaccggt atttgacttg ccgccaatcc ggttcatcgc aatcgcgaga
     4381 ttggtgtgcg cttcaaagga gatcgagcca aacgacatgg caccagtgac aaaacgtttg
     4441 acgatctccg aagccggctc aacttcgttg agaggtatac tttcgttacc gtcaaaatca
     4501 aattcgaaca gaccacgcaa atttttcagt ttgcgcgaat gatcattcat agctgtggca
     4561 aattcgttgt aagtatctgg taaattacca cgggcggaat gttgtaattt ggagattgtt
     4621 tccggtgtcc acatgtgttc ttcgccacgg atgcggtaag ccatatcacc gccaacatcc
     4681 aaggctgatt ccaatattgc agaattgccg aaagccagct catggcgagt aacggtttcc
     4741 tgggctattt cttcgaggcc gataccttcg atcgctgagg cagtgttggt gaaataggct
     4801 tcgatgaact cgtcccgcaa gccgatggca tcgaaaattt gagcaccgca ataagactga
     4861 taggtggaga tgcccatttt tgacattact tttagaatac ctttgtcaac ggctttaatg
     4921 tagcgggtgt gggactcggt gattatcaga tcgtccggca attgatcgcg ggcgtcggta
     4981 atcacgtcaa aggccagata gggattaacg gcttccgctc catagcctgc cagcaagcaa
     5041 aaatcatgaa cctgcctggc ttcaccggtt tcaattacta agccggattc ggtccgtaaa
     5101 ccttcgcgga tcagatgatg atgaactgcc gcggtcgcga gcaaggacgg gatggctatt
     5161 tgatctgcgc ttaacccccg atcagacaga ataagaatgt tgtggccttc aagaactttt
     5221 tccttcgctt ccttgcaaag actgtcaagt gcggccttca tgccagcggc gccatcagag
     5281 gcggcataac aaatgctgag cgtaaccgac cggaaagaac cgttgcggct atcgatatgg
     5341 cgaatttttt ctagatcgac gttggatagg atcggttgac gtacctcaag gcgcatatgt
     5401 ttaccacccg tttccaaatc aagcagattt ggccgcgggc cgatcaacga gaccaaagac
     5461 atcaccagtt cttccctgat cgggtcaatc ggcgggttgg tcacttgagc aaaggcctgt
     5521 ttgaaatagt cgaacagcat cttagggcgg tccgatagca ctgcctgcgg ggtatcccgg
     5581 cccatggagc caattgggtc ctggccgctc gttgccatcg gcaatagata gaatttcaga
     5641 tcttcctggg tgtagccaaa ggcctgctgt cgatcaagca gagtctgatg atcgagcggc
     5701 atcagctcaa catcggctgg caagtcttcg agtcgaattt gggtttcatc aagccagttt
     5761 tgatacggtt gagcgttgga caggttgtct tttagctcag cgtcatcaat gatgcggccc
     5821 tcttccaaat caatcaggaa cattttaccc ggttgtaaac gccacttctc aacaatcttt
     5881 tcatctggga tatcgagcac acccacttcg gaacccataa tgcagaggtc atcgtcggtg
     5941 acaacatagc gggcagggcg caaac
//
LOCUS       DASCNL010000293         2070 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000652671, whole genome shotgun sequence.
ACCESSION   DASCNL010000293 DASCNL010000000
VERSION     DASCNL010000293.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000652671"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="QF359_04025"
     CDS             complement(<1..552)
                     /locus_tag="QF359_04025"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJO86107.1"
                     /translation="MSKIFAFLEKEEERELAVRAGQGDKEATDRLITSHFNYVVKLAK
                     GYRRSGVPMPDLIQEGMIGLAQAVKRFNPDRNVRLSTYAMWWIRASMQDHIVKSWSVV
                     RLSTTSAQKSLFLNLRRLTADLIDGADALSDDIVSRLAERFETTASDVRNLARRVTTK
                     DLSLNVRVFEDSNESWLDMLASDD"
     gene            696..1310
                     /locus_tag="QF359_04030"
     CDS             696..1310
                     /locus_tag="QF359_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJO86108.1"
                     /translation="MDICDMARKAKPKKATPDKIIAATLKMATTHPWPEILLDDIAEA
                     VKLKPSELKQHFASKLAILDGFNRQIDEQVAAAFGDASENESVRDQLFDILMSRFDAL
                     QPQKKAVKAILRKTVPFDPKASLCGLGAVMRSMGSALNLLGIRSKTPLGCIKIRALAA
                     VYLRSFKIWLEDESADMAKTMVILDDGLAKIENLAQIFPRSKKN"
     gene            1342..1677
                     /locus_tag="QF359_04035"
     CDS             1342..1677
                     /locus_tag="QF359_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HJO86109.1"
                     /translation="MKIDYKDFSKVDIRAGTISRAEEFPEARNPSFKIWVDFGAEIGE
                     RKSSAQITHYYDLASLIGKQVAAVVNFPAKQIGPFMSDCLVLGFPDEAGEVVLISPSH
                     DVPNGGKLF"
     gene            complement(1674..>2070)
                     /locus_tag="QF359_04040"
     CDS             complement(1674..>2070)
                     /locus_tag="QF359_04040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJO86110.1"
                     /translation="NNVNFGRDFDIKDFGQLSDSFRIIFGQLLDRCVTNLVENAERYA
                     DHVSVRAGQRGKEIEITIDDDGPGIPEEFREDAFRPFYRLEDSRNPETGGVGLGLSIA
                     RDVIRGHGGDIALGDSPSGGLRARLTLPL"
BASE COUNT          565 a          523 c          481 g          501 t
ORIGIN      
        1 gtcatcggag gccaacatat ccagccagct ttcattacta tcctcgaaaa cgcggacatt
       61 cagtgataga tccttagtcg tcacccggcg tgccaaatta cgcacatcag aagccgtagt
      121 ctcgaagcgt tccgccaatc ggcttacaat atcatcgctc agcgcatcgg caccgtcgat
      181 caaatccgct gtcaggcgtc gcaaattcaa aaacaaggat ttctgggcgg aagttgtcga
      241 caggcgaacc accgaccagg atttgacaat atgatcctgc attgatgctc tgatccacca
      301 catggcatag gtcgagagac gcacgtttct gtcagggttg aagcgtttca ccgcttgggc
      361 gagaccaatc ataccttctt ggatcaaatc cggcatcggc acacccgaac ggcgatagcc
      421 tttggcgagc tttacaacat aattgaaatg gctggtgatc aggcggtcgg tggcttcttt
      481 atcaccttgg ccggcacgca cggcaagctc gcgttcttcc tctttttcga gaaaggcgaa
      541 tattttactc attttccggt cttctagtgc catccatcaa ccttcaaata acgccaagtt
      601 tatcatatag ctaaattact aatattaaaa tttttttgtg aaaatcttcc gtaacccgtc
      661 aataagcgat attatcaact ttcggagtaa ttcgaatgga tatttgtgat atggcgcgta
      721 aagcgaagcc aaaaaaagcg acacctgaca aaattatcgc cgccacgctc aaaatggcga
      781 cgacacaccc gtggccggaa attttgctgg atgacattgc tgaagcggta aaactcaagc
      841 cctcagaact taagcagcat tttgcctcaa aactggccat ccttgatggc tttaaccgcc
      901 aaatcgatga acaagtagcg gcggctttcg gcgacgcttc agaaaatgaa tctgtgcgtg
      961 atcaattatt tgacattctg atgtcacgat ttgatgcttt acagccgcaa aaaaaggccg
     1021 tcaaagcaat tttgcggaaa actgtacctt ttgatcccaa ggccagcttg tgcggcctgg
     1081 gcgccgtcat gcgaagtatg ggatcagcgc tgaatttact cgggatcaga agtaaaacgc
     1141 cgcttggctg catcaaaatt agggctttgg cagcggtata tttgcgcagt tttaagatct
     1201 ggctggaaga cgaaagcgcc gatatggcta agaccatggt gattttggac gatggcttgg
     1261 cgaaaatcga aaacttggcg cagatatttc cgcgttcaaa aaaaaattaa ccaacctaaa
     1321 gctgcctaag cagaggctcc catgaaaata gattacaaag acttcagcaa ggtcgacatc
     1381 cgtgccggca ccattagccg ggctgaagaa ttccccgaag ctcgcaatcc atcctttaaa
     1441 atttgggtcg attttggtgc ggagatcggt gaacgcaaat catctgctca gatcacccat
     1501 tattatgatc tggcgagtct gatcggcaaa caggttgctg cagtggtcaa tttcccagcc
     1561 aaacaaattg gcccgtttat gtcggattgt ctggtattag ggttcccgga tgaagcaggg
     1621 gaagtggtgc tgatctcgcc cagccacgat gtgccgaatg gcgggaaatt attctaaagc
     1681 ggcagggtaa gccgggcacg tagaccaccg gacggagaat cacccaaggc aatgtctccg
     1741 ccatgaccgc ggatgacatc ccgggcaatc gacaggccga gcccgactcc acccgtttcc
     1801 ggattgcgcg aatcttctaa gcggtaaaac ggtctaaaag catcttcgcg gaactcttcc
     1861 gggatgcccg gcccatcatc atcgatggtt atttctatct ccttgccgcg ctggccggct
     1921 ctcaccgata catgatccgc ataacgttca gcgttctcaa ctaaattggt aacacagcga
     1981 tccaacaact gtccgaaaat gatccgaaaa ctatccgaaa gctgtccaaa atctttaata
     2041 tcaaaatctc ttccaaaatt gacattatta
//
LOCUS       DASCNL010000294         1115 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000655337, whole genome shotgun sequence.
ACCESSION   DASCNL010000294 DASCNL010000000
VERSION     DASCNL010000294.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000655337"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1115
                     /locus_tag="QF359_04045"
     CDS             <1..>1115
                     /locus_tag="QF359_04045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJO86111.1"
                     /translation="QVYISTELAKVLGQAEEIAEKAGDSYVTAERLLLALALTSDTPS
                     HKILTANGVTPQNINIAIEDMRKGRKAHSATAEDGYDALNKYAQDLTADAREGKLDPV
                     IGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPEALLSKQLM
                     VLDLGALLAGAKFRGEFEERLKAVLTEVTEAAGEVILFIDEMHTLVGTGAAEGAMDAS
                     NLLKPALARGELHCVGATTLKEYRQNVEKDAALARRFQPVFIAEPTVEDTISILRGIK
                     EKYDLHHGVRITDAALVAAATLSNRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEEI
                     DELDRRIIQLKIEMEALKKESDKTSQERLLLLDEELG"
BASE COUNT          283 a          287 c          301 g          244 t
ORIGIN      
        1 ccaggtttat atttcaaccg agctcgccaa agtcttaggc caggccgagg aaattgctga
       61 aaaagccggt gacagctatg ttacggcgga gcgtttacta ctggccttgg ctcttacctc
      121 tgataccccc tcccataaaa ttctaacagc caatggcgtc acgccacaaa atattaacat
      181 cgcgatagag gatatgcgca aaggccggaa agcccattct gccaccgctg aagatggtta
      241 tgatgcgcta aataaatacg ctcaagacct gacggcggat gcgcgcgaag gtaaactcga
      301 tccggtgatt ggccgtgatg aggaaatccg ccgcaccatt caagtgctgt cgcgccggac
      361 caaaaacaat cctgtactga tcggagagcc gggggtgggt aagactgcca tcgtcgaagg
      421 tctagctttg cggatcgtta atggcgatgt gccggaagct ctactcagca aacaattaat
      481 ggtgttggat ttgggcgcgt tactcgccgg cgcgaagttc cgcggtgaat ttgaagaacg
      541 tcttaaagct gtgctcaccg aagtgaccga agcggctggt gaagtgatcc tgtttatcga
      601 tgaaatgcat acgctggttg gcaccggtgc tgctgaaggt gcaatggatg cgtctaattt
      661 gctcaaaccc gctttggccc gcggcgagct gcattgcgtc ggcgccacca cacttaaaga
      721 ataccgccaa aatgttgaga aagatgcggc tttggccagg cgttttcagc cggtctttat
      781 tgctgagccg acggttgaag ataccatttc gatcttacgc ggcattaaag agaaatacga
      841 tctccatcac ggcgtacgca tcaccgatgc tgccctggta gccgccgcga cactttccaa
      901 ccgttatatc accgaccgct tcctgccgga taaagcgatc gatctgatgg atgaagccgc
      961 cagccgctta cgcatggaag tcgattccaa acccgaggag attgatgagc tcgaccgccg
     1021 gatcattcag cttaagatcg aaatggaagc gctcaagaag gaatccgaca aaacctcgca
     1081 agagcgcctg ctgttattgg atgaagaact cggcg
//
LOCUS       DASCNL010000295         1352 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000655948, whole genome shotgun sequence.
ACCESSION   DASCNL010000295 DASCNL010000000
VERSION     DASCNL010000295.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000655948"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            206..1198
                     /locus_tag="QF359_04050"
     CDS             206..1198
                     /locus_tag="QF359_04050"
                     /inference="COORDINATES: protein motif:HMM:NF020650.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO86112.1"
                     /translation="MLHQNKLLKLLTVPVLAVGTLIATAPAQKADAQDVTYLLPAPGF
                     LPAFGPWMLAQGRGYYKAEGINVKFQTAHGGVDVAKQVGAGNAVIGGGIGDTPVIVRP
                     NGIPVKAVAVLGGRSLMQLVTRNDRGIKTLKDLKGKTITALSLQDTTYYALLGMLATV
                     GLTKNDVKAQGAGPVGVWKLFLAGKADAMAAVPDWIGIAYGAKVKLKIWPADDHFKSM
                     AQAILASDKVIKENPKLIGKLVRATLHGLTDIMKDPDGAAVDYVKHVQKHKGKEKQMA
                     SVFKLYNKYVYPGQKTVGAMDRARLKGLQDFYVKQGILRKSSKLDDLYTNQFVN"
BASE COUNT          365 a          308 c          338 g          341 t
ORIGIN      
        1 cgatcatcga agaaatcgat atcgacttgc cactcaggga aaatccgttg gctcgccgtc
       61 atgattggca gaaggacgta gcagtatatg ttacccgtct tatggaattg ttacatgtcg
      121 gtgaattggc atcggaagta gaaatttagt caacagggaa attctactac aaatatttta
      181 actgtttaac aatggaggta tctaaatgtt acatcaaaat aaacttttaa aattactgac
      241 cgtcccggtt ttggcggttg gcactctcat tgctactgca ccggctcaaa aagcggatgc
      301 acaggacgtc acttatcttt taccggctcc tggatttctg ccagcctttg gtccatggat
      361 gttggcgcaa ggccgtggtt attacaaagc cgagggtatt aacgtgaagt tccaaaccgc
      421 tcatggcgga gttgacgttg ccaagcaagt tggtgccggc aatgcggtta tcggcggcgg
      481 tattggagat acacccgtaa tcgtgcggcc gaacggtatt ccagttaaag ccgttgctgt
      541 cttgggcggc cgttctttaa tgcaattggt gacccgcaat gatcgtggca tcaaaacgct
      601 taaagatctc aaaggtaaaa ccatcactgc cttgtcactg caggatacta cctattatgc
      661 cctgcttggc atgctggcga ccgttggtct gacaaaaaac gatgtcaaag ctcagggtgc
      721 tggtcctgtt ggtgtgtgga aattattcct cgccggtaaa gccgatgcca tggcagcagt
      781 gccggattgg atcggcatag cttatggtgc caaggtgaag cttaaaatct ggccggctga
      841 tgatcatttt aaaagcatgg ctcaggctat cctcgcctct gataaagtca tcaaagaaaa
      901 cccgaagctt attggtaaac ttgtgcgggc aacgctgcat ggtctcaccg acatcatgaa
      961 agacccggat ggtgcagctg tcgattacgt caagcatgtc caaaaacaca aaggcaaaga
     1021 aaaacaaatg gccagcgtgt ttaagctcta caacaaatat gtctatccgg ggcaaaaaac
     1081 cgttggagcc atggatcggg cgcgtttgaa aggcttgcag gacttctacg tcaagcaagg
     1141 tattttgcgc aaatcctcga aacttgacga tctctatacc aatcagttcg tcaactaagc
     1201 caattatgag ccgaagaagc agaatatgtc tgatcaaacc aaggcaaaac ccaacggaat
     1261 tcaaggcggc atcggcgcca gtatcgccgt tgccgttgtt tttctcatcg gttgggagtg
     1321 gggaccggga ttttttaaca tcccgcccta ta
//
LOCUS       DASCNL010000296         3140 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000659562, whole genome shotgun sequence.
ACCESSION   DASCNL010000296 DASCNL010000000
VERSION     DASCNL010000296.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000659562"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1427)
                     /locus_tag="QF359_04055"
     CDS             complement(<1..1427)
                     /locus_tag="QF359_04055"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HJO86113.1"
                     /translation="MLTQDWNTSPRKHNVVVETNLTIPLSDGITLDADVTRPDTNDPV
                     PVLLSAHAYPKEDQYTDLIPTGFSHTRGHMEAGDGHFFARRGYIHIVVNVRGTGLSGG
                     TYDNLGERTILDICEAIEWLAEQEWCDGNVGMFGMSFFAIVQNMVAAKNPPALKAIFA
                     PFAYTDMYRDRYYHGGILSHGFMKMWLPTLADPKLAPLLQQEIGDAAFQELVDAAKAD
                     PDIMAVPFLSEALEAPLEERFALIAEILAQPLDNDYYRDRSLDYTEKPAVPAYLGACW
                     GVFGLHLPGAFRSWENWAGPKCLTIGPPLYLDRPIYQYQYESLRWFDHWLKGQETGLD
                     VENPVRVFIDGTGDWKEGDSWPFPETRWTPFYLHNDGWLNEHELFEHDDTTSFEDAQG
                     DHGDVQFWTGGMVEKTEICGPIVLNLYAETTADEVLWFISILHQDKDGNKSLLTRGWL
                     RGSQRELDQDKSLPWQPYYKHTSRTP"
     gene            complement(1549..1842)
                     /locus_tag="QF359_04060"
     CDS             complement(1549..1842)
                     /locus_tag="QF359_04060"
                     /inference="COORDINATES: protein motif:HMM:NF014860.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86114.1"
                     /translation="MHFRYLGVRSSWLILARNEDFSSFARSAKTYAEKAVFAKVLVKD
                     GTGRILGAHLLGHGAPETIHLFTFAMTYGVTAEQLGSTVYAYPTFMSNIKFLI"
     gene            complement(1929..2444)
                     /locus_tag="QF359_04065"
     CDS             complement(1929..2444)
                     /locus_tag="QF359_04065"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HJO86115.1"
                     /translation="MDIKDHIRGIPDFPQPGILFYDISTLLAHADAWQVTMGRLAKEV
                     SRHQPDLLAGIESRGFLVAAPLALKLGLGFTMVRKKGKLPGPTILYEYELEYGTDVIE
                     IQADAVEPGQKVVLLDDLLATGGTMAAAVELLRQVGAEVVGSACIIELNFLNGREKLD
                     IPCTTLVQYDE"
     gene            2513..2695
                     /locus_tag="QF359_04070"
     CDS             2513..2695
                     /locus_tag="QF359_04070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86116.1"
                     /translation="MTNVFHRNPQNEPPIAVDGRGMYLINANGKEYIDASGGAAVSCL
                     GHGDPEVTKAIMQIAR"
     gene            complement(2782..>3140)
                     /locus_tag="QF359_04075"
     CDS             complement(2782..>3140)
                     /locus_tag="QF359_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020044343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJO86117.1"
                     /translation="ILSTALFANTASAAGDAKKGKKVFKKCKACHTVKAGKHKIGPSL
                     AGVIGRKAGSAKGFKKYKGLKGASWNWDEAALNDYLKNPKKYLKAKNGKKGAMVFKLK
                     KAKDRNNVIAYLKASK"
BASE COUNT          822 a          770 c          757 g          791 t
ORIGIN      
        1 ggcgtgcggc tagtgtgttt gtaatagggc tgccagggta aggatttatc ttggtcaagt
       61 tcccgctggg agccgcgcaa ccaaccgcgg gttaagagcg atttgttgcc atccttatcc
      121 tggtgcagga tcgagataaa ccaaagtact tcatcggctg tagtttccgc atacagattt
      181 aaaactatcg ggccacaaat ctcggttttc tcaaccatgc cgccggtcca aaactgaaca
      241 tcaccatgat caccctgagc gtcttcaaaa ctcgttgtat catcatgctc gaacaattca
      301 tgttcgttca accagccgtc attgtgcaaa tagaacggcg tccagcgggt ttccgggaag
      361 ggccagctat caccttcttt ccaatctccc gtaccatcaa taaatacgcg cacaggattt
      421 tctacgtcaa ggccggtttc ctgtccttta agccaatggt caaaccacct gagcgattca
      481 tattgatatt gataaatcgg acggtccaaa taaagcggtg ggccaatggt caggcatttc
      541 ggtcccgccc agttttccca actgcggaag gcacccggca agtggagacc aaacacgccc
      601 cagcaagcac caagataagc aggcacggct ggtttctcag tgtaatccag ggagcgatca
      661 cggtagtaat cgttatcgag aggttgggct aaaatctcgg cgatcaaggc aaagcgttct
      721 tcaagtggcg cctcaagtgc ctcgcttaga aacggcactg ccatgatgtc cggatcagct
      781 ttggctgcat ccacaagctc ttgaaaagct gcatcaccga tttcctgctg gagcaggggt
      841 gccagctttg gatcagctaa agtaggcaac cacatcttca tgaagccatg gcttaagatg
      901 ccaccgtgat aatagcggtc tcggtacata tcagtgtagg caaagggggc gaaaatcgct
      961 ttgagggcag gcgggttttt ggcggcgacc atgttctgaa caatggcaaa aaaggacatg
     1021 ccaaacatac cgacattgcc gtcacaccat tcttgttcgg caagccattc aatggcctca
     1081 caaatatcca gaatcgtccg ttcacctaga ttgtcgtaag tgccacccga caggccagtg
     1141 cctcgtacgt tcacgacaat atggatatat ccacgccggg caaaaaaatg gccatcaccg
     1201 gcctccatat gaccgcgcgt atgggagaag cccgtcggaa ttaaatcggt atattgatct
     1261 tcctttggat aggcatgggc gctgaggaga accggtactg gatcgttggt atcaggacgc
     1321 gttacatcgg catcaagcgt aatgccatcg ctcaacggaa tagtgagatt tgtctcaaca
     1381 acaacattgt gcttgcgagg tgaagtgttc caatcctgtg tgagcaattc cctgtccccc
     1441 ttggcagtca atcgatgata tttctccaat actcgctatc aaccaaaata gcaaaccacc
     1501 gaaaaatacc aaaagaaaca actgcgagcg ctgtagctaa cggatgttct aaatcaaaaa
     1561 cttgatgttc gacataaagg tcgggtaggc gtagaccgtg ctgccaagtt gctcggcggt
     1621 aaccccataa gtcatagcaa aggtaaagag atgaatggtt tcgggcgcgc cgtgacccag
     1681 caaatgtgcg cccaaaattc tgccggtacc gtctttgacc agaaccttgg cgaatacggc
     1741 tttctcagca taggttttgg ccgagcgggc aaatgaggag aaatcttcat ttctggctaa
     1801 aatgagccac gaactgcgga cacctaaata tcgaaagtga atacggcgaa ggcaccatgg
     1861 ttagttttta tttgccagcc agccgtttaa tcaatcaagc cgcctaaatt agggtcagga
     1921 cccattaatt actcgtcgta ttggaccagc gtcgtgcagg gaatatctaa cttttcccgg
     1981 ccgttgagaa aattaagttc aatgatgcag gcgctgccga cgacttccgc gccaacttgc
     2041 cgcagcagct caactgccgc cgccatggtg ccgccagttg ccagcagatc atcgagcaga
     2101 acaaccttct gaccgggctc aactgcatcc gcctgtattt cgatgacatc ggtgccgtat
     2161 tccaactcat attcataaag gatggttggt cccggcagtt tgcctttttt ccgtaccatg
     2221 gtgaaaccaa gaccaagttt aagagcaagt ggtgcagcca ccaaaaatcc acgcgattca
     2281 atgccggcca gtaaatccgg ctggtgacgg ctcacttcct ttgccaaccg ccccatcgtg
     2341 acctgccagg catctgcatg cgccagaagg gtggagatgt cgtaaaataa aatgccgggt
     2401 tgaggaaaat ctggtatgcc gcgaatgtga tctttgatat ccatggtact cgttgtcgcc
     2461 ttttggtgtt cgatttaatc tacttaatcc agtctaacgg cacaaaatta acatgaccaa
     2521 tgtttttcat cgtaatccac aaaacgagcc gccaattgcc gtcgatgggc gggggatgta
     2581 tttgattaat gctaacggca aagaatatat cgatgcgtcg ggtggtgcgg cagtatcatg
     2641 ccttgggcat ggtgaccctg aagtcactaa agctatcatg cagattgctc ggtaatggtg
     2701 gtacgagaat agtatgatta gagcgcatta gaaaacgccg ctatcgaatg agatagcggc
     2761 gtttttattt cgtaaaataa tttacttcga agctttaaga taagcgatca cattattacg
     2821 atctttggct tttttgagct tgaaaaccat agcgcctttt ttgccgtttt tggcttttaa
     2881 atattttttc ggatttttca aatagtcgtt aagggctgct tcatcccagt tccagcttgc
     2941 acctttaaga cctttgtatt ttttaaagcc ttttgccgaa cctgctttgc ggccaatgac
     3001 gccggcgaga gaagggccaa ttttatgctt gccggcttta accgtatgac aagctttgca
     3061 ttttttgaaa acttttttac ctttcttggc atcgccggca gcagaagccg tatttgcaaa
     3121 aagggcagtc gaaagaataa
//
LOCUS       DASCNL010000297         2860 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000659857, whole genome shotgun sequence.
ACCESSION   DASCNL010000297 DASCNL010000000
VERSION     DASCNL010000297.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000659857"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1377)
                     /locus_tag="QF359_04080"
     CDS             complement(<1..1377)
                     /locus_tag="QF359_04080"
                     /inference="COORDINATES: protein motif:HMM:NF013100.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HJO86118.1"
                     /translation="MNFERLRHPFSPPDSNISVKETASEIPTHIKFEGIRRQALEIGR
                     NRLLVTGALFTLAFAVIAGRLVELAVVEKIGEEARSNRIAATSIMRKVRSDITDRNGI
                     LLATSLPTASLYANPQHILDPKEAAWKLARVFPNSDRSKIQAKLAVQKTFVWLQRNLT
                     PKTQFAVNALGIPGLYFQRTERRVYPHGRIVAHALGLTNIDGQGLSGIEGYFDKFLRG
                     SDEPIALSLDIRVQSILREELLNSMAEFRAIGAAGVVMDATNGEVWAMISLPDFNPNK
                     PITAAGITGFNRVTKGVYEMGSTFKLFTAAMALDTGVARLQDRYDATKPIKISRFQIS
                     DYHAKNRWLSVPEIIVYSSNIGAAKMALKVGTAGQKKYLKQFGMLKPVAIELPEIGSP
                     LTPDHWREINTMTIAYGHGIAVSPLQLVAGVATLVNGGKLYNPRMTKLSNGQQAVGSR
                     VLSQATSKK"
     gene            complement(1374..1715)
                     /locus_tag="QF359_04085"
     CDS             complement(1374..1715)
                     /locus_tag="QF359_04085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86119.1"
                     /translation="MRQTTVLTLLLAAIMSVALFFLKYEVTDLEEELNILNKAIVADQ
                     EGIHVLKAEWSHLNDVARIKDLASRYLKMKPTRPVQIKSVEELTSQDGDEQAISVDKI
                     SNKSSKKGSRR"
     gene            complement(1731..2705)
                     /gene="rsmH"
                     /locus_tag="QF359_04090"
     CDS             complement(1731..2705)
                     /gene="rsmH"
                     /locus_tag="QF359_04090"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HJO86120.1"
                     /translation="MTSANTVNGHIPVMMHEVVTSLNPRDGGIYVDGTFGRGGYSQAI
                     LEAAATQVFGIDRDPAAITFGAELSDKYDGRLTVLEGCFGDMTDLMAAAGVAKVDGVT
                     LDLGVSSPQIDDPVRGFSFRFAGPLDMRMSGDGPTAADFVNQAPEEEIADVIYNYGEE
                     RYARKIARAIVAGRENNPILSTTQLVEIIHGIVRRSKDGIDSATRTFMALRIQVNDEF
                     GELERGLIGAEKILAPGGRLAVVSFHSLEDRQVKSFLHEHSGAMGRGSRHLPDNPDAV
                     PVPSFTLVKRGAIKPRKDEAAQNPRARSARLRVAERNDAPAWPDIVGE"
BASE COUNT          688 a          772 c          712 g          688 t
ORIGIN      
        1 ttttttcgac gtcgcttgcg agagaactct ggaaccaacc gcttgttgac cgttcgacaa
       61 cttggtcatc cttggattat aaagcttgcc cccattgaca agagtagcta ccccagcaac
      121 cagctgtagt gggcttaccg caatgccgtg accataggct atcgtcatcg tgttgatctc
      181 gcgccaatga tcgggcgtca agggtgagcc aatctcaggc aactcaatcg ctaccggttt
      241 cagcatgcca aattgtttga gatatttctt ttgacctgct gtgccaacct tgagcgccat
      301 tttggcggcg ccaatattag atgaatagac aatgatctcc ggcacagaga gccagcggtt
      361 cttggcgtgg tagtctgata tctgaaagcg ggaaatttta atcggcttgg tcgcatcata
      421 gcgatcctgc aggcgcgcca caccggtatc aagcgccatc gcggcggtaa atagcttgaa
      481 ggtcgagccc atctcataga cacctttggt gacccgattg aacccggtta taccagcggc
      541 ggtgatcggc ttatttggat tgaaatcagg cagcgaaatc atcgcccaca cctcgccgtt
      601 ggtagcatcc ataaccacac ccgccgcacc aatggcgcgg aactccgcca ttgaattcaa
      661 taattcttca cgcaagatcg attgcacgcg gatgtccagc gataacgcga tcggctcgtc
      721 ggagccgcgc agaaatttat caaaataccc ctcaataccg gacaggccct gaccatcaat
      781 attggttagg cctaaagcat gggccacaat ccggccatgc ggatagaccc gccgttcggt
      841 acgctggaaa taaaggccgg gaatgcccaa ggcgttaact gcaaattggg tttttggcgt
      901 gaggttgcgc tgcaaccaaa caaaggtctt ttgcaccgcc aactttgctt ggattttaga
      961 ccggtctgag ttgggaaata cccgggccaa tttccaggcc gcttctttgg gatcaagtat
     1021 gtgttgcggg ttggcataaa gcgatgcagt tggcaaactc gttgccagta aaatgccgtt
     1081 gcgatcagtt atgtcagatc gcactttgcg cattattgag gtcgccgcaa tccgattact
     1141 acgtgcttcc tcgccaattt tctcgaccac ggccaattcc accagacgcc cagcgataac
     1201 tgcgaaggcc agcgtgaaca gcgcgccggt caccaataac cggttgcgcc cgatctctag
     1261 agcttgacgc cggatgcctt caaatttgat gtgagtggga atttcagaag cggtctcctt
     1321 caccgaaata tttgaatccg gtggactgaa gggatgacgg agacgttcaa aattcacctg
     1381 cgcgacccct ttttggaaga tttgttggaa attttatcaa ctgagatcgc ttgttcgtca
     1441 ccgtcttgac tggttaattc ctcgaccgat ttaatttgca ccggtcgagt aggcttcatt
     1501 tttagatagc gcgaagctaa atccttgatc cgggcaacat cgttcaaatg gctccattcg
     1561 gctttgagga catggatgcc ttcctgatcg gcgacgatag ccttgttaag aatatttaat
     1621 tcctcttcaa ggtcggtgac ttcatatttc aaaaagaaca gcgcaacact catgatggct
     1681 gcgagtagaa gtgtgagtac tgtcgtctgt cgcattctcc tcttcccctt ctattcacct
     1741 acaatatctg gccaagctgg tgcatcattg cgctcagcca ctcgaagccg ggcagaacgt
     1801 gcccgaggat tttgtgctgc ttcatctttc ctaggtttga tggcgccgcg cttcactaat
     1861 gtgaagctcg ggaccggcac cgcatcggga ttatcgggca gatggcggga accgcgcccc
     1921 atagccccac tatgttcgtg gaggaaagat ttcacttgac ggtcttccaa cgaatggaaa
     1981 gacacaacgg ccaaacggcc gcccggagca agaatttttt ccgctcctat caagccacgt
     2041 tcaagttctc caaactcgtc attgacttga atacgcaacg ccataaaagt ccgggtggcg
     2101 gaatcaatcc cgtcctttga ccggcgcaca ataccatgga tgatttcgac caattgagtg
     2161 gtcgacaaaa tcgggttgtt ttctctgccg gcaacaatgg cacgggcaat tttccgtgca
     2221 tagcgttctt caccataatt ataaatcaca tctgcaattt cttcttccgg cgcctgattg
     2281 acaaaatcgg ctgcggttgg cccgtcgcca ctcatgcgca tatcaagcgg gccagcaaag
     2341 cggaaggaaa agccgcgtac cggatcatcg atttgcggcg aggatacgcc gagatcaagc
     2401 gttaccccat cgaccttagc cacccctgca gcggccatta aatctgtcat gtcaccaaag
     2461 caaccttcaa gcacagtgag acggccatca tatttatcac tcaattcagc accgaaagta
     2521 atcgcggcgg gatcgcgatc aatgccaaac acttgggttg cggcggcctc tagtatcgct
     2581 tggctgtaac caccacgacc gaaggtgcca tcgacataga tgccgccatc acgcggatta
     2641 agcgatgtga caacttcgtg catcatgacg ggaatatgac cattaactgt attggcggaa
     2701 gtcatgaact acctccgtca tccgaacgca ggcggagcgt cgcccccctg cttcgagcac
     2761 gttcaaaggc ctcggcatta tgggtttcat aagcttcggg ctgccagatt tgaaatcgag
     2821 tgccgcggcc cacaaagacg gcttgtgtgg taagaccggc
//
LOCUS       DASCNL010000298         1181 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000660823, whole genome shotgun sequence.
ACCESSION   DASCNL010000298 DASCNL010000000
VERSION     DASCNL010000298.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1181)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1181)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000660823"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1044)
                     /gene="alr"
                     /locus_tag="QF359_04095"
     CDS             complement(<1..1044)
                     /gene="alr"
                     /locus_tag="QF359_04095"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HJO86121.1"
                     /translation="MTTFGATLTIDLRALAQNYQTLNNQLSSGNLAAVVKANAYGLGV
                     EEAALALNKAGCENFFVATLEEGIELRKILPAASVHIFHGVLPGTAKDIVAHNLIPIL
                     NSLNQIEEWQPTAEHLAGLHIDTGMSRLGLTSAECESVGDRLNGFNIKIVLSHLACAE
                     EPANPKNQEQLALFNGLRSLIPADHASLAASSGIYLGPDFHFDLSRAGVSLYGVNPTP
                     GRSNPMAQVVRLQAKILQVRSVDTPQTVGYGATHQVAKLAKIATLGIGYADGYLRSLS
                     NSATAYIGDIEVPVVGRVSMDLTTIDVTGIADAELATGSLVDLIGPNNPVDQVAKQAA
                     TIGYEILTRLGHRF"
     gene            complement(1062..>1181)
                     /locus_tag="QF359_04100"
     CDS             complement(1062..>1181)
                     /locus_tag="QF359_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HJO86122.1"
                     /translation="HAELIIGKQRHGPTGTAKLYFDGTYTRFGDLDTQHTQFY"
BASE COUNT          280 a          280 c          315 g          306 t
ORIGIN      
        1 aaagcgatga cctaatcggg tcagaatttc atatcctatg gtagcggctt gcttcgcaac
       61 ttgatccact ggattattgg gaccaatgag gtcaaccaag ctgccggtag ccaattcggc
      121 gtcagctatg cccgtgacat caattgttgt taaatccatt gaaacccgtc ctaccactgg
      181 tacctcgata tcgccgatat aggcagtcgc tgaattgctg aggctacgca aatatccatc
      241 agcataaccg atgcctaggg tcgcgatttt tgctagttta gccacctgat gggtggcacc
      301 atagccaacg gtctgagggg tgtcaacgga acgcacttgc aggatttttg cttgtaaacg
      361 aacaacttgc gccattggat ttgatcttcc gggcgttgga ttaacgccgt aaagcgagac
      421 tccagcgcgg ctcagatcaa aatgaaaatc tggccccaaa tagatgccgg agctggccgc
      481 gagactagcg tgatccgccg gaatgagtga tcttaaacca ttgaacagag cgagttgttc
      541 ttggtttttt ggatttgccg gctcttccgc gcaggctaaa tggctcaaca cgattttaat
      601 gttaaatccg ttgaggcgat ctcctacgct ttcgcattcc gctgaggtca gaccaagccg
      661 cgacatgccg gtatcgatat ggagcccggc caggtgttcg gccgtgggct gccattcttc
      721 aatttggttc aggctgttga gaattggtat cagattgtgg gcaacaatat ctttagccgt
      781 gcctgggaga acaccatgaa aaatatgaac gctggcggct ggtaatatct ttcggagctc
      841 gataccttct tccaacgttg cgacgaaaaa attttcacag ccggctttat tgagtgcaag
      901 tgcagcttct tcgacgccga gcccataggc gttggctttg accacggcgg ccaaattacc
      961 tgagctcaat tggttattaa gtgtctggta gttttgcgct agagccctaa gatcgatagt
     1021 caaggtagcg ccgaaggttg tcatgtcacc ctccggtcaa attagtaaaa ctgagtgtgt
     1081 tgggtatcaa gatcaccaaa tcgggtgtag gtaccatcga aataaagctt ggcggtgccg
     1141 gtcgggccgt ggcgctgttt gccgatgatg agttcggcat g
//
LOCUS       DASCNL010000299         1208 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000661807, whole genome shotgun sequence.
ACCESSION   DASCNL010000299 DASCNL010000000
VERSION     DASCNL010000299.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000661807"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="QF359_04105"
     CDS             complement(<1..336)
                     /locus_tag="QF359_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86123.1"
                     /translation="MSAFRFDICRLPPEAEALRQKVWAFFEEELSHMTPLQRADSWDG
                     FDRDFSRKMAAKGWIGLTWPEQYGGHERTALERYVVLEEALVAGAPVSAHWIAERQSG
                     PLLLSFGSEE"
     gene            complement(405..869)
                     /locus_tag="QF359_04110"
     CDS             complement(405..869)
                     /locus_tag="QF359_04110"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HJO86124.1"
                     /translation="MPEDQNTQMQNTKYKFRDRLLPHLLARASHSLSEKLMAVVRARG
                     LTARQWRVLGSLWDEDSMTLTELSDIVFCEQSTTTRLVERLVDLKLLGKRLEQSDRRK
                     VHIYLTVKGRRQIDELVKLSEQFEKETIDLFGIDQIEEMKHQLHEMIEHSKK"
     gene            989..>1208
                     /locus_tag="QF359_04115"
     CDS             989..>1208
                     /locus_tag="QF359_04115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86125.1"
                     /translation="MTDVKSELVGRGMRDGAKLFRDWFDDLSRIAEEKRGAAYVFVLG
                     SMNEVLKTFDMPVSFPEVNALQTAIRGVS"
BASE COUNT          322 a          303 c          265 g          318 t
ORIGIN      
        1 ttcttcgctg ccaaagctaa gcaaaagcgg accactttgg cgctcggcga tccaatgagc
       61 cgagaccggt gcgccggcga ccaaggcttc ttccagcaca acatagcgtt ccaaagccgt
      121 ccgctcatgg ccgccatatt gctcaggcca agtcaatccg atccagccct ttgccgccat
      181 cttccgactg aaatcccggt caaaaccgtc ccaggaatca gcccgctgaa gaggcgtcat
      241 atgacttagt tcttcctcga aaaacgccca taccttttgg cgtaaggctt cagcttctgg
      301 cggtagtcga cagatgtcga aacggaaagc gctcatgctg catcactacc gtcgctaata
      361 cgaaaatata ggataatccc ctccccaaaa taaaaagcac tatttcattt tttcgaatgc
      421 tctatcattt catgtaactg gtgtttcatt tcttctattt ggtctatgcc gaacagatct
      481 atagtttcct tctcgaattg ttcactaagc ttcaccaatt catcaatttg gcgccgtcct
      541 ttaacggtca gataaatatg aaccttacgg cggtcgctct gttccagtcg cttgccgagt
      601 aatttcagat cgactaaccg ttcaaccaaa cgcgtggtgg ttgattgctc acaaaatacg
      661 atgtcggaca gctcggtcag agtcatgctg tcttcatccc aaaggctacc caagactcgc
      721 cattgccggg cggtgagacc acgcgctctt actactgcca ttaatttttc actcaaacta
      781 tggctggcac gcgccaaaag atggggcagt aatcgatccc gaaatttata cttggtattt
      841 tgcatctggg tattttgatc ttctggcatg ctaacaatta acagtgaatt atatgcaaat
      901 gcaagttttt tcaattgaca taaaaggcga taaaaggttt tatataaatt atatgaattt
      961 gcatgtaata gacaaaaaat aaaggcggat gacggacgta aaaagtgaat tagtcggcag
     1021 aggaatgcgg gacggtgcca aactattccg ggactggttc gacgatctaa gccggattgc
     1081 cgaagaaaag cgcggcgctg cctatgtctt tgtcctgggc agcatgaacg aagtgttaaa
     1141 aaccttcgac atgccggtta gctttcctga agttaacgca ctgcaaactg ccattcgtgg
     1201 cgtttcgc
//
LOCUS       DASCNL010000300         2131 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000662260, whole genome shotgun sequence.
ACCESSION   DASCNL010000300 DASCNL010000000
VERSION     DASCNL010000300.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000662260"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="QF359_04120"
     CDS             <1..1008
                     /locus_tag="QF359_04120"
                     /inference="COORDINATES: protein motif:HMM:NF012428.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO86126.1"
                     /translation="TASGTEATLMALRLARAFTGRAKILQFAGHFHGWQDHVVSGYEA
                     PQENAPPPGILPTIAADNIVVEAGNRDQVAAAFAQNHDIAAIIIEPTGAHFGATPLAL
                     EFLKYLRFITSEHQCVLIFDEVVTGFRVAPGGMQELVDVRPDLTTLGKILAGGLPGGA
                     VTGRLDIMNQLDFQATREAGQRKISHPGTFNANPLSAVTGSKALEILGGSDICAKVNE
                     KGEQFRQQLNQVLADLKLKWAVYGTYSGFHLFTNAQNRNIESVNFDPTEIPLNELTEN
                     DATILPPLRLALLINGIDTSPRFSGFLSASHGATELEQTAVAFRLALELLIDEGIVET
                     P"
     gene            1005..>2131
                     /gene="hydA"
                     /locus_tag="QF359_04125"
     CDS             1005..>2131
                     /gene="hydA"
                     /locus_tag="QF359_04125"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004157 - dihydropyrimidinase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HJO86127.1"
                     /translation="MTEKLIKNGRIITATDDYTADILIASGIVKMIGLEIAVGEDVEI
                     IDASGLLVMPGGVDVHTHLEAEVGAAKTVDTFETGTMAAAFGGTTTLVDFAQQPHGGG
                     VIAGLDDWQARAANACVDVGAHMIITTFNDQTLVDIKSILQNDGVTSFKMFMVMPGVM
                     MIDDAELYQIMRMTGENGGLSCVHAENGLLIDLLIKETVADGRNEILNHPRVHPPGTE
                     GEAVHRAIQIAKLADSPLYVVHVSTQDAVNHIAEARHDGVSIYAETCPHYLFLTEEEY
                     DKPNNEAAKYTMIPPLRSREHQDALWQGLANDDLQIISTDHCPFCLTEQSWGLEHSKA
                     LGRESFDQMPNGAPGVETRLPLIYDGGVRQGRLSLNRFVQL"
BASE COUNT          517 a          547 c          559 g          508 t
ORIGIN      
        1 accgcatccg gtaccgaggc aacgctgatg gcgctgcgcc tcgcgcgagc ttttaccggt
       61 agggccaaaa ttttgcagtt tgccggtcat tttcatggct ggcaggatca tgtcgtaagc
      121 ggttatgaag cgccgcaaga gaacgcacct ccacccggta ttctgccaac tattgccgct
      181 gataatattg tcgttgaagc tggtaatcgt gaccaagttg ccgcagcctt cgcccaaaac
      241 catgatatcg cggccattat tattgagccg acgggagcgc attttggcgc cacccccttg
      301 gcactggagt ttctcaaata cttgcgcttt atcactagtg aacatcaatg tgtgctcatt
      361 tttgatgaag tggtgaccgg tttccgagtc gcgccgggcg gtatgcagga attggttgat
      421 gtcaggcccg atctaacgac cttgggtaaa atcttggcag gtgggttgcc gggcggggcc
      481 gtcaccggcc gcttagacat tatgaaccag ctcgattttc aagccacacg tgaggctgga
      541 cagcgcaaga tctcccatcc tgggaccttc aatgccaatc cgttgagcgc tgttaccggt
      601 agcaaagctc tggaaatact tggtggttca gacatttgcg ctaaggtgaa tgagaaaggc
      661 gaacaattcc gccagcaact caaccaagta ttggccgatc taaaactgaa atgggcggtc
      721 tatggtacct attcaggatt tcatctattt accaacgcac aaaatcgcaa cattgagtca
      781 gtcaattttg acccgactga aattccgcta aatgaactga cggagaatga tgcgacaatt
      841 ctcccgccat tgcgattggc gctgctcatc aatggtatcg acaccagccc ccgttttagc
      901 ggctttctat cggccagcca tggcgcaaca gagcttgagc aaacggccgt tgcgttccgg
      961 ctcgccttgg aattacttat cgatgaaggc atagttgaaa caccatgact gaaaaactga
     1021 ttaaaaacgg ccggataatt actgccaccg acgactatac agcagatatc cttatcgcca
     1081 gcggcattgt caagatgatc ggactcgaaa ttgcggtcgg cgaagacgtt gagattatcg
     1141 atgccagtgg gctcttggta atgccgggag gcgttgatgt gcatacccat cttgaagccg
     1201 aagtcggggc ggccaaaacg gttgatacgt ttgaaaccgg tactatggcg gcagcgttcg
     1261 gcggcaccac aacactcgtc gattttgctc agcaaccgca tggcggcggc gttattgccg
     1321 gtctcgatga ttggcaggcg cgggccgcca acgcctgcgt cgatgttggc gcccatatga
     1381 tcattacgac tttcaacgat cagaccttgg ttgatataaa atctatttta caaaatgacg
     1441 gcgtcaccag tttcaaaatg ttcatggtga tgccgggcgt catgatgatt gatgatgctg
     1501 aactgtatca gattatgcgg atgacgggcg aaaacggtgg tctctcctgt gtccatgcgg
     1561 aaaacggttt gttgatcgat ttactgatca aagaaacggt cgctgacggc cgcaacgaaa
     1621 ttctcaatca cccgcgagtt catccaccgg gcacggaagg cgaggcggta catcgggcga
     1681 tccaaattgc caagcttgcc gactcaccac tctatgttgt gcacgtgtcg acccaagatg
     1741 cggttaacca tattgccgaa gcacgccatg atggggtgtc tatttatgcc gaaacctgcc
     1801 cgcactattt gtttttaacc gaggaagaat atgacaagcc caacaatgaa gcggctaaat
     1861 acacaatgat tccacccctg cgttcgaggg agcatcagga tgccctatgg cagggacttg
     1921 ccaacgatga tttgcaaatc atttcgaccg atcattgccc gttttgtctg actgaacaaa
     1981 gctggggcct tgagcactct aaagcgctcg ggagggaatc attcgaccag atgcccaatg
     2041 gcgcccccgg cgtcgagacc cgcttgccat taatctatga tggtggcgtc cgccagggcc
     2101 gcctgtcgct caatcgtttt gtacaattaa a
//
LOCUS       DASCNL010000301         1552 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000664214, whole genome shotgun sequence.
ACCESSION   DASCNL010000301 DASCNL010000000
VERSION     DASCNL010000301.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000664214"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(27..>1552)
                     /gene="nusA"
                     /locus_tag="QF359_04130"
     CDS             complement(27..>1552)
                     /gene="nusA"
                     /locus_tag="QF359_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HJO86128.1"
                     /translation="REEVLEAMEMAIQKAGRSKYGHEFDIRAEVDRDTGEIQLARYIE
                     VVDEVENEATQLTIDEAKKTKSDAQVGEFLVDPLPPMDFGRIAAQTAKQVIVQKVREA
                     ERKRQFAEFKDRIGEVVNGMIKRVEFGNVIVDLGGRAEGIIRRDECIPREHFNNGDRV
                     RSYIYDVREEQRGPQIFLSRSHTQFMAKLFTQEVPEIYDGIIEIKSVARDPGSRAKIA
                     VISSDTSIDPVGACVGMRGSRVQAVVAELQGEKIDIISWSDEPATFIVNGLAPAEVTK
                     VVLDEEQNRIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDILTEAEESDRRVEEFR
                     ARSQLFIDSLDVDEVIAQLLVTEGFSTIEEVAFVPVEELSAIEGFDDDVANELRERGR
                     QYLEQREAELNAIRKEAGVSDEVAEFEGLTPEMVVALGENEVKSLDDLADLASDELRE
                     IVGEVNLSEDATNKIIMAARAHWFEDEDAANVEAEAETPAEEAPEETAEVVEKKLET"
BASE COUNT          364 a          441 c          331 g          416 t
ORIGIN      
        1 ttatttacct caactcaaaa cctaaattag gtttctaatt ttttctcaac aacttcggca
       61 gtttcttcag gagcctcctc cgctggcgtt tccgcctctg cctctacatt agcggcatct
      121 tcatcttcaa accaatgggc gcgggccgcc atgataattt tatttgtagc gtcttcgctc
      181 aaattgactt cgccaacaat ttcgcgcaat tcatcactag ccaaatcagc tagatcatca
      241 aggctcttta cttcattttc accgagtgcc acgaccattt ccggcgttaa tccttcaaac
      301 tcggcaactt catcactaac gcccgcttct ttgcggattg cgttcagttc agcttcccgt
      361 tgttcaagat attgacggcc acgttcacgt aactcattgg cgacatcgtc atcgaagcct
      421 tcgatagccg acagctcttc gaccggtaca aaggcaacct cttcgatagt tgagaaacct
      481 tcggtaacca gcaattgcgc aataacttcg tcaacatcca ggctgtcgat aaagagttgc
      541 gagcgcgccc ggaattcttc aacccgccgg tctgattctt ccgcttcggt caagatatca
      601 atatcccaac cagtcaattg agaggccagg cgcacgtttt gaccgcgccg gccaatcgcc
      661 aggcttagtt gttcgtcggg gacaacaact tcgatacggt tttgttcttc atccaaaaca
      721 actttggtca cctcagccgg agccaaaccg ttaacaatga atgtggccgg ttcgtcagac
      781 caagaaataa tatcaatttt ttcaccttgc agttctgcca ccacagcctg cacgcgcgaa
      841 cctcgcatgc caacgcaggc gccgaccgga tcaatgctgg tgtctgaaga aataacggcg
      901 atcttggctc ggctgccagg atcacgggca actgatttaa tttcgataat gccgtcataa
      961 atttccggca cttcttgagt aaacagcttg gccataaatt gcgtgtgact gcgcgacagg
     1021 aagatttggg gtccacgttg ttcttcgcgc acatcataaa tataggagcg gacccgatca
     1081 ccattgttga aatgctcacg cggaatacat tcgtcacgcc ggataatacc ttcagcgcgc
     1141 ccacctaaat caacaatgac attgccgaat tcaacccgtt tgatcatacc gttaacaact
     1201 tcaccaatgc ggtctttaaa ttcagcaaac tggcgcttac gttcggcttc acggactttt
     1261 tgcacaatga cctgtttggc ggtctgggcg gcgatgcggc caaagtccat gggcggcagc
     1321 gggtccacca aaaattctcc aacctgagca tcggatttgg ttttttttgc ctcgtcaatg
     1381 gtcagttggg tggcttcgtt ttccacctcg tcaaccactt ctatataacg cgcgagctga
     1441 atttctccgg tgtcacggtc cacttcggcg cgaatatcaa actcgtgtcc gtatttcgaa
     1501 cgcccggctt tctggatcgc catttccatg gcctcgagaa cttcctcgcg tt
//
LOCUS       DASCNL010000302         3168 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000664315, whole genome shotgun sequence.
ACCESSION   DASCNL010000302 DASCNL010000000
VERSION     DASCNL010000302.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3168)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3168)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000664315"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            93..629
                     /locus_tag="QF359_04135"
     CDS             93..629
                     /locus_tag="QF359_04135"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJO86129.1"
                     /translation="MVNARSTGTSEQSKDDSQSSSDYETGLSDDEQLDVRIWLRLLTC
                     ANLIERRVRKNLRDKFDTTLPRFDVLAQVDRSPNGQPMRELSRRMMVTNGNITPLVDR
                     LVEDKLIKRDPSPKDRRVQHIRLTAGGKRALDEMIPAHVSWVNNLIANLDRDNASQLY
                     ALLGELKASIQTAERDED"
     gene            641..2302
                     /locus_tag="QF359_04140"
     CDS             641..2302
                     /locus_tag="QF359_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86130.1"
                     /translation="MTSKLPGGVGTAYQDTFASDNLPSAETLSKIDFSGTPELATYPD
                     HMNVATELLDKAVAEGFGDNPVLHLAATTWTYHELLDRANRVAEVLTEDCGLVTGNRV
                     LLRAPNTPMLVAAWFGVQKAGGICVATMPLLRARELQYVIEKAQVSIALCDIELAEEM
                     VGALELTDSITHTFYFSKTGTGGEAATLETAGDGKSGQFETANTAADDVALIAFTSGT
                     TGKPKGAVNFHRDVMASADTFARYVGKITPDDIITGTPPLAFTFGLGGILIFPMLFRA
                     STRFLESPLPNDILETIQQYKITQIYSAPTAFRAMADIAGDYDISSLRQGVSAGETLP
                     KATWEAFRKATGIRLIDGLGSTEMFQIFISASPEEMRPGFTGKAIPGYCARVVDDSGN
                     EVPPGTPGQLAVQGPTGCKYLDDPDRQPVYVKDGWNYPGDIYEMDEDGYFKYVARADD
                     MIISSGYNISGPEVESVLLEHEAVAECAVIASPDPQRGNIVKAIIVLRTGFDGTNDLI
                     KTLQDFAKKEIAPYKYPRAIAFIEELPKTQTGKLQRYRLRDLETS"
     gene            2394..>3168
                     /locus_tag="QF359_04145"
     CDS             2394..>3168
                     /locus_tag="QF359_04145"
                     /inference="COORDINATES: protein motif:HMM:NF019912.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86131.1"
                     /translation="MPQEKSWNMKLVSQNTLGGFGGMGEGMGIQITKDGRRIMWLAHE
                     GAPKNFTGVNITDIKNPKIIIQTELPHDHVRSNSLEVTGDVMAVAYQCWKAADDRSPG
                     FNEKPAGIELFDISDPENPKSISFFDCSGPHSMGVHQLWFADGEYIHFAGGAADFEPT
                     NPKDCQFYRCIDVSNPAKPEEVGRWWYPGTRQGDSEAPPPRHPTFDGGYRAHNTNVYP
                     ERPDRCYLAYLDGGMFILDISDKSRPKAISSWNPHPPYPG"
BASE COUNT          787 a          830 c          797 g          754 t
ORIGIN      
        1 cttgttccaa attccaattt gctttaatat taaatagttt agacttaaag taatataaca
       61 atagggccga aaaattggga cttgctagac atatggtaaa tgcacgatcc acgggaacct
      121 cagaacaaag taaagatgac agccaatcga gcagtgatta tgaaaccggg ctgagcgatg
      181 acgagcaact tgatgttcgc atctggttgc gattgctaac ctgcgccaac ttaatcgagc
      241 ggcgggtgcg taaaaattta cgtgacaaat ttgacaccac cttaccccgc tttgatgtat
      301 tggcgcaggt cgaccggtct ccgaatggcc agccgatgcg ggaattgtcg cggcgcatga
      361 tggtaaccaa cggcaatatc acgccgctgg tggatcggct ggtcgaggac aagctcatca
      421 aacgcgaccc ctcaccgaaa gatcgccgcg ttcaacacat tcgcctgacc gcaggcggca
      481 aacgggcact cgacgagatg atcccagcgc atgtttcctg ggtgaataat ttgatagcta
      541 atttggatcg cgacaatgca tctcaacttt acgctttatt aggtgagctg aaagcctcca
      601 ttcagacggc tgaaagagac gaagactgac gaggacgatt atgaccagta aacttccggg
      661 tggcgtcggc accgcctacc aagatacttt tgccagcgac aacctgcctt cggcggagac
      721 tctctctaaa attgattttt ccggcactcc ggaattggca acctatccgg atcacatgaa
      781 cgttgccacc gagctattag acaaagccgt tgctgaaggt ttcggcgata atccggtgct
      841 tcatttagct gcaaccactt ggacctatca cgagctgtta gatcgcgcca atcgcgtcgc
      901 cgaggtcttg accgaggatt gcggcttggt gaccggtaac cgggtgttac tcagagcgcc
      961 aaatactccg atgctggtcg cggcttggtt tggcgtccag aaagccggtg gtatatgtgt
     1021 cgccacaatg ccgctgctgc gcgcccgtga attacagtat gtcattgaaa aagctcaagt
     1081 ctccatcgcc ctttgcgata ttgagctggc cgaggaaatg gtgggcgcgt tagagcttac
     1141 cgatagtatc acgcacacat tttatttctc caaaaccggc accggcggcg aggcggcaac
     1201 tttagaaact gccggggacg gtaaatcggg ccagtttgag accgcaaaca ccgccgccga
     1261 tgacgtcgcg ctgatcgcct ttacctcggg cacgacgggc aaacccaaag gcgccgttaa
     1321 tttccaccgc gatgtgatgg cttccgctga taccttcgcc cgctatgtcg gcaaaataac
     1381 gcctgacgac atcatcaccg gcacgccgcc tttagctttc acctttgggc ttggtggtat
     1441 tttgattttt cccatgttgt tcagagcatc gacccgcttt cttgaaagcc ctttgccgaa
     1501 cgatatcctc gaaaccatcc agcagtataa aattacgcaa atttattccg cgccaacggc
     1561 ttttcgggca atggcggata tcgctggtga ttatgatata tcgtcgttgc gccagggcgt
     1621 ttcagccggt gagactctcc ccaaggcaac ttgggaggct ttccgcaagg ccactggtat
     1681 tcgtctgatc gatggtctgg ggtcaaccga gatgttccaa atatttattt cggcaagccc
     1741 ggaggaaatg cggcccggct tcaccggcaa agcaatcccc ggctactgcg cacgcgttgt
     1801 cgacgatagc ggcaatgaag tgccaccagg cacccccggc caactggctg tacaaggacc
     1861 aaccggctgc aaatatcttg atgatcccga tcgtcaaccg gtttatgtca aggatggctg
     1921 gaactatccc ggcgatatct atgaaatgga tgaagacggt tacttcaaat atgtcgcccg
     1981 cgccgatgat atgataattt cgtcgggcta taatatttcc ggccccgagg tcgaaagtgt
     2041 gttgctggag catgaagccg tcgccgaatg tgcggtcatc gcctcacctg accctcaacg
     2101 cggcaatatt gtcaaagcca ttattgtgct tagaaccggc tttgacggta ccaatgacct
     2161 gatcaaaacc ctccaagatt ttgccaaaaa ggagattgca ccctacaaat acccccgcgc
     2221 tattgccttc attgaagaat tacccaaaac ccagaccggt aaattacagc gctaccggtt
     2281 acgagacctg gagacgtcat aatcacgagt tgctcacgca attgatttgg caaattaatt
     2341 ttgaaccgct aactctttgc cgataatatt taaaatagac ataggggaag aagatgcctc
     2401 aagaaaaatc ctggaatatg aaactggtct cgcagaacac gcttgggggc ttcgggggca
     2461 tgggcgaggg tatgggtatt caaattacca aggacgggcg gcgcattatg tggctagccc
     2521 atgaaggtgc gccgaaaaat tttaccggcg ttaatattac cgacatcaag aaccctaaga
     2581 tcatcattca aaccgagcta ccccatgatc atgtcaggtc caattcactg gaagttaccg
     2641 gtgacgttat ggcggttgcc tatcaatgtt ggaaagctgc tgatgaccgc tcccccggct
     2701 ttaatgaaaa gcctgcaggt attgagctgt ttgatatcag cgacccggaa aacccgaaat
     2761 cgatttcgtt ttttgattgt tcgggtccgc attcgatggg cgttcatcaa ttgtggttcg
     2821 ccgatggtga atatattcac tttgccggcg gcgccgctga tttcgagcca accaatccca
     2881 aagattgcca attttaccgc tgcatcgatg ttagcaaccc cgcaaaaccc gaagaggttg
     2941 gccgctggtg gtatccgggt acgcgccaag gcgacagcga ggcgccaccc ccacgtcacc
     3001 caacttttga tggcggttac cgggcgcaca acaccaatgt ttatcctgag cggcctgatc
     3061 gttgctacct tgcctatttg gatggcggta tgttcatttt ggatatttcg gataaatcta
     3121 gacccaaagc tatttcatcc tggaacccgc atccccctta tccgggct
//
LOCUS       DASCNL010000303         1509 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000665007, whole genome shotgun sequence.
ACCESSION   DASCNL010000303 DASCNL010000000
VERSION     DASCNL010000303.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000665007"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="QF359_04150"
     CDS             <1..180
                     /locus_tag="QF359_04150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86132.1"
                     /translation="IKTSSRTALYRLCDFSMARVTFEAIMTDDRVSAVMSGRCLNLLA
                     MPPENWDGCFILSSK"
     gene            complement(252..>1509)
                     /gene="ligA"
                     /locus_tag="QF359_04155"
     CDS             complement(252..>1509)
                     /gene="ligA"
                     /locus_tag="QF359_04155"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HJO86133.1"
                     /translation="AELMTVYDEISGKRAQLDYDIDGVVYKVNCLDWQERLGFVSRAP
                     RWAVAHKFPAEKAQTIINEIDIQVGRTGSLTPVAKLEPVTVGGVVVSNATLHNEDEIT
                     RKDIRVGDTVVILRAGDVIPQVVEVILNKRPKGLKAFKYPTICPICGSDAVRDEGESV
                     RRCTGGVICDAQVIERFKHFVSRGAFNIEGFGRKHVEAFFDEGLIKTLADIFRLSTHE
                     ANLKTREGWGKKSVANLLAAIEKRRTIPLERFIYALGIRQIGQANARLLAKQYVSLGT
                     LRQAMKDAAVIGSDALSDLNNIDGIGPSVAGDLIAYINEDRNRELLNDFESQLNIEDF
                     EAPDDSSSPIVGKTIVFTGTLETVTRGEAKTKAEQLGAKVAGSVSKKTDYVVAGPGAG
                     SKAKNAEKFGVAILSENEWLALIDEG"
BASE COUNT          380 a          405 c          335 g          389 t
ORIGIN      
        1 ataaaaacct cttctagaac ggcattatac aggctctgtg atttttcgat ggcccgtgtt
       61 acttttgaag ccatcatgac cgatgatcgg gtttccgccg ttatgtcagg acgctgtctg
      121 aacctcctcg ccatgccgcc ggaaaactgg gacggttgtt ttatattgag cagtaagtag
      181 ctcatttagg agacacaata ctttattgaa aaggttaaca aatcaaatgg tgcctggcac
      241 cgagcaacaa attaaccttc gtcaataagc gccaaccact cgttttcaga caatattgca
      301 acaccaaatt tttcggcatt ttttgctttg gaaccagcac ccggaccggc tacaacgtaa
      361 tcggtttttt tggagaccga gcccgccact tttgcgccca gttgttcggc tttagtttta
      421 gcttcgcccc gggtcaccgt ttcgagcgta ccggtaaaga caatggtttt gccgacaatc
      481 ggcgaggagc tgtcatccgg cgcttcaaaa tcttcaatat tgagttggct ttcaaaatcg
      541 ttcagtagct ctcgattacg atcttcatta atataggcaa tcaaatcacc ggcaaccgac
      601 gggccgatac catcaatatt attaagatcg ctcaatgcgt ctgagccaat aactgctgca
      661 tctttcatgg cctgccgcaa tgtgccgaga gagacatatt gcttagcgag cagccgcgca
      721 ttggcttggc caatttgccg tatacccaaa gcataaataa accgctcaag cggaatagta
      781 cgccgctttt caattgccgc taaaagatta gcgacggatt ttttgcccca gccttcccgg
      841 gttttgagat tagcctcgtg ggtgcttaaa cgaaatatat cagccagcgt tttgatcaga
      901 ccctcatcga agaacgcctc aacatgtttt ctaccaaagc cttcgatatt aaaggcgccg
      961 cgggaaacaa aatgcttgaa gcgctcaatc acctgggcgt cacaaatcac cccacccgtg
     1021 caccggcgca cagactcacc ttcatcgcgc acagcgtctg aaccgcaaat tgggcatatg
     1081 gtgggatatt taaaagcttt taatccttta ggccgcttat tgagaatcac ctcaaccacc
     1141 tgcgggatta catcaccggc ccttaggata actaccgtat cgcccacccg gatatcttta
     1201 cgcgtaatct cgtcttcatt gtggagcgtc gcattggaga ccacaacgcc gccaaccgta
     1261 accggctcaa gcttggcaac tggggttagc gaaccagtgc gcccgacttg aatatcaatc
     1321 tcgttgatga tggtttgcgc tttttccgcc gggaatttat gggccaccgc ccagcgtgga
     1381 gcacggctga caaagcccag ccgctcttgc cagtcgaggc agtttacttt gtagacaacc
     1441 ccatcgatat cgtaatcaag ctgtgcgcgt ttcccggata tttcatcata gacagtcatt
     1501 aactcggca
//
LOCUS       DASCNL010000304         1151 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000665523, whole genome shotgun sequence.
ACCESSION   DASCNL010000304 DASCNL010000000
VERSION     DASCNL010000304.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000665523"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /locus_tag="QF359_04160"
     CDS             complement(<1..847)
                     /locus_tag="QF359_04160"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HJO86134.1"
                     /translation="MPSEGFHDRDGLIWYDGEMVEWRDANLHMLTHALHYASSVFEGE
                     RVYAGNIFKLREHTDRLINSAEIMGFKIPYSADEIDAACIEACKVNNIIDGYVRPIAW
                     RGSEMMGVSAQETKIHLAIAVWEWPSYFSPEARNKGISLKTSQWRRPPPESAPVHAKS
                     AGLYIICTMSKHEAEAAGYDDALMLDWRGNVVEGTGANFFMITDGNVINTPPPDCFLN
                     GITRQTVIELVKKRGYKLVERHIKPEELPDALEIFVTGTAAEVTPVGKIDNLELTVGE
                     VTKNLR"
     gene            1048..>1151
                     /locus_tag="QF359_04165"
     CDS             1048..>1151
                     /locus_tag="QF359_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJO86135.1"
                     /translation="MELLFFSYRDFIGEPDAILDDYDFGRAHHRVIHFV"
BASE COUNT          272 a          285 c          273 g          321 t
ORIGIN      
        1 cgcgcaaatt cttggtgact tcaccaacgg tcaattcgag attatcgatt ttacccactg
       61 gggttacttc cgctgctgtg ccggtgacga agatttcgag cgcgtctggc aattcttccg
      121 gcttgatatg ccgctcaacc aatttatagc cgcgtttttt tacgagttcg ataacggttt
      181 gccgggtgat gccgttcaag aagcagtccg gcggcggcgt gttaatgaca ttgccgtcgg
      241 taatcataaa gaaattagcg cccgtgcctt cgacaacgtt gccgcgccaa tcgagcatca
      301 aggcgtcatc atagccggcc gcttcagctt catgcttgga catcgtgcag attatgtaaa
      361 gaccagcgga tttagcatga acgggggccg attccggagg cgggcggcgc cattgtgagg
      421 ttttcaagct gattccttta ttgcgtgctt ccggtgagaa ataggacggc cattcccaaa
      481 ccgcgatggc caagtgtatt ttagtttcct gggctgaaac acccatcatt tcgctaccgc
      541 gccaggcgat cgggcggaca tagccatcaa tgatgttgtt gactttacac gcttctatac
      601 aggcggcatc aatctcatca gccgagtagg gaatcttaaa acccattatt tctgcagaat
      661 ttatcagtct gtcggtatgt tcacggagct tgaaaatatt gccggcgtaa acgcgttccc
      721 cctcgaacac gctcgacgca taatgcagag catgcgttag catatgcaga ttggcgtcgc
      781 gccactccac catttcccca tcgtaccaaa tcaacccgtc acggtcgtga aaaccttcac
      841 ttggcatgaa attatcttcc cagtttttat tgttttacga aatgatgttg cttcaaatag
      901 cgttatctgg catatatgtc aataacactg acttattttt taaaatgtat attattattg
      961 aaaaggttca gaatggacgc gtcaactccg gaaacgccaa aggagaaact tgaagccgct
     1021 tattcagacg ccgagctgcg cgacgctatg gaactgctgt ttttctctta tcgtgatttt
     1081 atcggcgagc cggatgctat tcttgatgac tatgattttg gccgcgccca tcaccgagtt
     1141 atccattttg t
//
LOCUS       DASCNL010000305         3854 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000667262, whole genome shotgun sequence.
ACCESSION   DASCNL010000305 DASCNL010000000
VERSION     DASCNL010000305.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3854)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3854)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3854
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000667262"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="QF359_04170"
     CDS             <1..556
                     /locus_tag="QF359_04170"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HJO86136.1"
                     /translation="AKVADNKESSFEPNYAEGILFGIGSAIGFGSSAIFIRAALAGSG
                     PTAGMAGGIISYGAAAVIMLMVIGHPTRLKHVTSMSRVTAKWFTASAFTIGISQMLRF
                     MALAVAPVTVVAPIQQTTVIFQVLFAWLINREHEAFGLWVMLGILCSLIGAIALSVST
                     EFVLETFDLPQSIRDITGWIWPSQ"
     gene            complement(548..772)
                     /locus_tag="QF359_04175"
     CDS             complement(548..772)
                     /locus_tag="QF359_04175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86137.1"
                     /translation="MELNEVINYTMIEGKQGSMPRAMMLSHLAQHGNYHRSWIAGLFG
                     QISQLPTAIGLPVYERALRESGLPPIPYLL"
     gene            complement(791..1051)
                     /locus_tag="QF359_04180"
     CDS             complement(791..1051)
                     /locus_tag="QF359_04180"
                     /inference="COORDINATES: protein motif:HMM:NF017015.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HJO86138.1"
                     /translation="MTINAWANEVCYTSVLDLPPEEVTKERPSLLMSILASLNHLLAM
                     DEVWLAHMTGSTHPYSELRTMITEDMDELWQIRQGIDKMLKD"
     gene            complement(1089..1979)
                     /locus_tag="QF359_04185"
     CDS             complement(1089..1979)
                     /locus_tag="QF359_04185"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF020039.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HJO86139.1"
                     /translation="MHTIPASQVECLLQSHSKVGECPTWSMEEQCLYWIDIEGRLFHR
                     WDPSSAANESWKTPERFGSFGLRQNGSFVVATENGFHFYDPISGDFLAITDPESDKPN
                     NRFNDGRVDRAGRFWAGSMIDQGTNEPNAALYCLDTNGEATLKQDGIILANGLAWDPD
                     NSTMYFADTRMAVVWAYDFDLDDAALSNRRVFIEFKDGDGAPDGAAVDTDGCYWLTQP
                     RSWTIKRYTPAGKVDTVIELPFERPTMCAFGGADLKTLYITSLGQFLNEGEKIERPLE
                     GGVFKVDVEAQGLPEPYFEG"
     gene            complement(1980..3719)
                     /gene="araD"
                     /locus_tag="QF359_04190"
     CDS             complement(1980..3719)
                     /gene="araD"
                     /locus_tag="QF359_04190"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinonate dehydratase"
                     /protein_id="HJO86140.1"
                     /translation="MAQKNKVKKKLEDLRSQRWYGPNTMRGVSARARSRQMGFGPDDI
                     NNKPRIGIINTWSDMNTCHSHFKDRAEEIKRGVYQAGGFPIELPAMSLGEILVKPSTM
                     LYRNFLAMEAEELIRCHPIDGVVLMGGCDKTTPALLMAALSMNIPAIYMPAGPMLRGF
                     YAGETLGSGTDVLRYWADRRAGLIDDEKMENVVGGMSRSAGTCMVMGTAATMMALSEA
                     LGMTLPGASSIPAVDTAHALMASACGRRIVDMVWEDLKPRDIMTEAAFDNATAVDMAM
                     GGSTNAMIHLIAIAGRAGIKLDLERFDKISQKTPVLANIKPSGEFLMEDFYYAGGIRG
                     LMNQMKDHLDLRQINVTGGTLGESIKDQPVYLDDVIKSLDDPLYHQGGTAILRGNLAP
                     DGCVIKQTAADPKFHQHVGKAIVFKDYTDLNLRIDDPDLEVDENSVLVLQNAGPIGAP
                     GMPEWGMLPIPKKLLEKGVRDMVRISDCRMSGTAYGTCVLHVAPEAAVGGPLGLVKDG
                     DEIEIDIQGRKIHLDVSEEELAKRKTAWSPPVYPATRGYTALYAKHVTQANEGADFDF
                     LHAGDETPEPLIF"
BASE COUNT          856 a         1074 c         1025 g          899 t
ORIGIN      
        1 cgccaaggtt gccgataaca aagaaagttc tttcgaaccc aattatgccg aaggaatact
       61 attcggtatc ggctcggcca tcggctttgg ctcaagcgcc atatttatcc gcgctgccct
      121 tgccggcagc ggaccaaccg ccggtatggc gggcgggatt atctcctacg gcgcagccgc
      181 tgttatcatg ctgatggtga tcggccaccc aacgcgcctc aagcacgtga cttcaatgtc
      241 gcgggtcacc gccaaatggt ttacggcctc ggccttcacc atcggcattt cgcagatgct
      301 gcgtttcatg gcgctcgccg tagcgccagt aaccgtggta gcaccgatcc agcaaaccac
      361 cgtgatcttt caagtgttat tcgcctggct aatcaaccgg gagcatgaag ccttcggcct
      421 ctgggtcatg ctaggtatct tgtgctcact gatcggtgcc attgcgctgt cggttagtac
      481 cgagtttgta ctggagacat tcgatctgcc gcaatcaatc cgcgacatca ccgggtggat
      541 ctggccatca caataaataa ggtatcggtg gcaggccgct ttcccttaac gcgcgttcat
      601 agaccggcaa gccgatggcg gttggcagtt gcgagatttg gccgaacagg cctgcgatcc
      661 agctccggtg ataattacca tgctgcgcca aatgagacag catcatggcg cggggcatcg
      721 aaccctgttt gccttcgatc atagtgtagt tgatgacctc gttcaattcc acattactga
      781 gaccagccgt ttagtctttc agcatcttgt ctatgccttg gcgtatctgc cacagctcgt
      841 ccatatcctc ggtgatcatg gtgcggagct cggaataggg atgggtgctg ccggtcatgt
      901 gggccaacca gacttcgtcc atggccagca aatgattgag gctggccagg atcgacatca
      961 gcagggaagg gcgttcttta gtgacctctt ccggcggcaa atccagcact gatgtgtagc
     1021 agacttcatt agcccaggcg tttatagtca accagagttt ggatataggc tttatcggtc
     1081 atttggtgtc acccttcaaa atatggttcg ggcaggcctt gggcctcaac atcgacttta
     1141 aatacaccac cttcgagtgg acgttcaatt ttttcaccct cgtttaagaa ttgtccgagc
     1201 gaggtaatat agagcgtttt caaatcagct ccaccgaagg cgcacatggt cgggcgctca
     1261 aacggcagtt caatgacggt atcgactttg cctgccggtg tatagcgttt gatggtccag
     1321 ctacggggtt gggtcagcca gtagcagccg tcggtgtcga ccgccgcccc atcgggcgca
     1381 ccatcgccgt ctttgaattc gataaacacc cgccggttgg agagcgcagc gtcatcaaga
     1441 tcaaaatcat aggcccagac cacggccatg cgggtatcgg cgaaatacat ggtggaattg
     1501 tccgggtccc aggcgaggcc attagcgagg ataataccgt cctgcttaag cgtcgcctca
     1561 ccatttgtgt ctaagcagta aagcgcagcg ttgggttcgt tcgttccctg gtcaatcatc
     1621 gaaccggccc aaaaacgccc ggcccgatct acgcgaccat cattgaagcg gttattgggt
     1681 ttatcggatt cgggatcggt gatagctaaa aagtcaccac ttatcggatc ataaaaatga
     1741 aaaccgtttt cggtggcgac tacaaagcta ccgttttggc gcaggccaaa agagccgaac
     1801 cgctccggcg tcttccagct ttcattcgct gccgaggagg gatcccagcg gtgaaacagg
     1861 cgaccctcaa tgtcgatcca gtagaggcac tgctcttcca tgctccaggt cgggcactcg
     1921 ccaaccttgg aatgactttg cagcagacat tcgacttgag aggcagggat ggtgtgcatc
     1981 taaaaaatca atggctccgg agtttcatca ccagcatgga ggaaatcgaa atcggcgcct
     2041 tcattcgcct gggtgacgtg tttggcatag agcgccgtat agccacgggt cgccgggtag
     2101 acaggcggag accacgcggt tttacgcttc gctaattctt cctcgctgac gtccaaatga
     2161 attttgcgcc cttggatatc gatctcgatc tcatcgccat cttttaccaa acccagcggg
     2221 ccgccgaccg ccgcctcagg ggcgacatgc aacacacaag tgccataagc cgtgccactc
     2281 atgcggcaat ccgaaatgcg gaccatatcg cgcacacctt tctccaacag ttttttcggg
     2341 atcggaagca tgccccattc cggcatgccg ggcgcgccaa tcggcccggc attttgcaac
     2401 accaaaaccg agttctcatc aacctccaga tcaggatcgt cgatgcgcaa attcaaatcg
     2461 gtgtagtctt taaagacgat ggctttacca acgtgctgat gaaatttcgg atcagccgct
     2521 gtttgtttga taacgcagcc atcgggggcg agattgcccc gcaagatcgc tgtaccgcct
     2581 tgatgataga gcggatcatc cagtgacttg atgacgtcat ccaaatatac cggttggtct
     2641 ttgatcgact cgcccaaggt gccgccggtg acgttaattt gcctgagatc gaggtgatct
     2701 ttcatctggt tcatcaagcc gcggatgccg ccggcataat aaaagtcttc catcagaaat
     2761 tcaccgctgg gtttgatgtt ggcgagcacc ggtgtctttt gcgaaatttt atcaaagcgc
     2821 tcgaggtcga gtttgatgcc ggcccgtccg gcaatggcga ttaaatggat catcgcattg
     2881 gtcgagccgc ccatcgccat atcgacggcg gttgcattat cgaaggccgc ttcggtcatg
     2941 atatcgcggg gttttaaatc ctcccatacc atgtcaacaa ttcgccgccc gcaagctgag
     3001 gccatcaagg cgtgcgccgt atcaaccgcc gggatcgaag aggcgccggg cagagtcata
     3061 ccgagggctt ccgacagcgc catcatggtt gccgccgtgc ccatcaccat acaggtgccg
     3121 gccgagcgcg acatgccgcc gacgacattt tccattttct catcatcgat cagacctgcc
     3181 cggcggtccg cccaatagcg caacacatcg gtgccgctgc ccaaagtttc accggcataa
     3241 aaaccccgta acatcggacc tgccggcatg tagatcgccg gaatgttcat cgacaatgct
     3301 gccatcaaaa gggcaggggt cgtcttatcg cagccaccca tcaaaaccac gccgtcaatc
     3361 ggatgacaac ggatcagctc ttcggcctcc atggcgagaa aattgcgata cagcatggtc
     3421 gagggcttga ccaatatttc gcccaatgac atggccggca gttctatggg aaagccgccc
     3481 gcctgataga caccgcgttt gatctcctcg gcgcggtctt tgaaatggga gtgacaggtg
     3541 ttcatgtcgc tccaggtatt gataatacca atccggggtt tgttattaat gtcatccggg
     3601 ccgaacccca tttgccgaga gcgggccctg gcactgacgc ctcgcatggt gttggggcca
     3661 taccagcgct gagagcggag atcttcgagt tttttcttca ctttattttt ttgggccatg
     3721 agatcaatcc ttaatcgagg gcatcttgtt tgtagagata catcagacca atctgacctt
     3781 tgtcgccatt gccttgggcg ccgagaaaac gataaagctc ggtgacagta gatgttacgg
     3841 gcatcggtga gccg
//
LOCUS       DASCNL010000306         1388 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000667316, whole genome shotgun sequence.
ACCESSION   DASCNL010000306 DASCNL010000000
VERSION     DASCNL010000306.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1388)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1388)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000667316"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="QF359_04195"
     CDS             complement(<1..692)
                     /locus_tag="QF359_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HJO86141.1"
                     /translation="MTDTELHPFRTHNCGELRRDNTGETVRLSGWIHRKRDHGNLLFV
                     DLRDHYGLTQLVIENTGPIFEVLEHARAETVITVTGKLEKRSDDTINPELPTGEVELR
                     IEDINVESPADELPMQVFGDADFPEDIRLSHRFLDLRREDVHKNIVLRSNVISSIRRR
                     MTESGFIEMQTPILTTTSPEGARDYLVPSRIHPGKFYALPQAPQIFKQMLMVSGFDKY
                     FQIAPCFRDEDAR"
     gene            complement(801..>1388)
                     /locus_tag="QF359_04200"
     CDS             complement(801..>1388)
                     /locus_tag="QF359_04200"
                     /EC_number="1.1.1.298"
                     /inference="COORDINATES: protein motif:HMM:NF003768.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonic semialdehyde reductase"
                     /protein_id="HJO86142.1"
                     /translation="PLDVNALDMMFRANRSFNGWKDDPVSDDQLKEIYDLMKLCPTSA
                     NCCPLRIKFIRSDEAKEKLGPVVMEPNRAKTLQAPVTAILGFDHDFYQHMPKLTPHRP
                     TDIKDRMEQNPDMIPWWVNLNGGLQAAYFMMAVRAVGLDVGPMQGVDKPSMDALYWSG
                     TKVKTAFICSIGRGDESTIFKKLPRFDFDEACELL"
BASE COUNT          339 a          356 c          336 g          357 t
ORIGIN      
        1 cgggcgtctt catctctgaa acacggcgca atctgaaaat atttatcaaa acccgagacc
       61 atcagcattt gtttgaaaat ctgcggtgct tggggcagtg catagaactt accgggatga
      121 attcggctcg gcaccagata gtcacgcgca ccttctgggg aagttgtagt caaaatcggc
      181 gtctgcattt ctataaaacc gctctcggtc atgcggcggc ggattgaaga aatgacattg
      241 ctgcgcagca cgatattttt gtgtacgtct tcccggcgga gatctaaaaa acgatggctg
      301 agtcgaatat cttccggaaa atcagcgtcg ccaaaaactt gcatcggcaa ctcatccgct
      361 ggactttcca cattgatgtc ttctatgcga agctcgactt cgcccgtcgg taattccgga
      421 ttaatggtat cgtccgagcg cttttcaagc ttgccggtca ccgtgatcac cgtttccgcc
      481 cgcgcatgct ccaacacttc aaagatcggg ccggtatttt cgatgactaa ttgagttaag
      541 ccataatgat ccctgaggtc gacaaacagt agattaccgt gatcgcgctt acgatggatc
      601 cagcccgaca ggcgaacagt ctcgccagta ttatcacggc gaagttcacc acaattatgg
      661 gtgcgaaagg gatggagttc ggtatctgtc atggcgtcaa tttttttatg aaaatcgtgt
      721 taaaagcgaa cggcgtaagc ttctgcccac accgcgccgg ttttaaagat ttccgccgat
      781 attacaagtg ttttagcggc ttaaagcaac tcgcaggctt cgtcgaaatc aaaccgtggc
      841 agttttttga agatcgtgct ctcatcgccg cggccaatgc tgcagataaa cgctgtcttg
      901 accttagtgc cagaccaata aagcgcatcc atgctgggtt tatcgacgcc ctgcatcggc
      961 cccacatcaa ggccgacagc tcgtaccgcc atcatgaaat aagctgcctg caagccacca
     1021 ttcaaattta cccaccaggg gatcatgtcg ggattttgct ccatgcgatc ctttatatcg
     1081 gttggccggt gcggtgtcag ttttggcata tgctgataaa aatcatgatc aaacccgaga
     1141 atggccgtta ccggcgcctg caatgtttta gcgcggttgg gttccatcac caccggaccc
     1201 aatttctcct tggcttcatc tgagcggata aattttatcc gcaaggggca gcaattggcg
     1261 ctggttgggc aaagcttcat aaggtcgtaa atttctttta gctgatcgtc gctcactgga
     1321 tcgtctttcc agccattaaa cgaacggttg gcgcgaaaca tcatatccag tgcattgacg
     1381 tccaaagg
//
LOCUS       DASCNL010000307         1263 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000667615, whole genome shotgun sequence.
ACCESSION   DASCNL010000307 DASCNL010000000
VERSION     DASCNL010000307.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000667615"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..759)
                     /locus_tag="QF359_04205"
     CDS             complement(<1..759)
                     /locus_tag="QF359_04205"
                     /inference="COORDINATES: protein motif:HMM:NF015366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HJO86143.1"
                     /translation="MNSFWRLLTLSIAVAGVALAGSVSAVQAQFPKKPITIVAYMKPG
                     GAADVDSRKFALIAERLTGGKFIVKNKTGAGGLVAMKHVLSQPADGYLLMATTKSQVF
                     KIVTAKSDVNVEDFEWLAMNQSDPEAIITNVDLPINTWQQLVADAKAKAAAGKKQIWV
                     GPAAGGLDHVMAMKTWKAAGISSAKYIPFKGGKKAVIELLGGRSVAYVGNPRDTIGQP
                     KLKVAALARAERLPAFPNAPTFRELGIKGLDDEIM"
BASE COUNT          338 a          306 c          278 g          341 t
ORIGIN      
        1 cataatctca tcatcgaggc ctttaatacc caactcacgg aacgtaggtg catttggaaa
       61 tgcaggaagc cgttcagctc gcgccaaagc ggcgactttt aatttaggct gaccgatggt
      121 gtcacgcggg ttgccaacat aagcgacgct acggccgcca agcagttcaa ttacagcttt
      181 cttaccacct ttaaacggaa tgtatttggc cgacgaaatg cccgcggctt tccaggtttt
      241 catggccatc acatgatcaa gaccacctgc agctgggcca acccagattt gttttttgcc
      301 cgccgctgcc ttggcttttg catcggccac caactgctgc cacgtgttga ttggcaaatc
      361 gacattggtg atgattgctt ccgggtccga ctggttcatc gccaaccact caaaatcttc
      421 aacgttcacg tcgcttttag ctgtcacaat tttaaaaact tgagacttgg tcgttgccat
      481 caaaagatag ccatcggctg gctgggacag cacatgtttc atggcgacca gcccgccggc
      541 gccggttttg tttttgacaa taaatttgcc cccggtaagc cgttctgcga ttaaggcgaa
      601 tttgcgagaa tcaacatccg cagctccgcc tggcttcatg taggcaacaa tagtgatggg
      661 ttttttggga aactgcgcct gtacggcact tacagagccg gccaatgcaa cgcctgctac
      721 ggcaattgaa agtgttagta aacgccaaaa cgaattcata gtcgtatcct cctcgaaaaa
      781 cggccaatac tctgaggcca agatcataga ttggtctggt taaactgtaa tcccaaatat
      841 tcaacgttaa ctttttgtct ctaataaaga tttcaattaa accagatcat aatctaacat
      901 ataaattata aattgtcttg cccctctata actgatccag ttctatctga cgtaaaatcc
      961 ctaatatatc ctcttctgaa aagcgcttcc gtgtcatcat tgtaccccgt cagcgccagt
     1021 tggacaaaat gagtcgattg cgtaagagag tgtttccggt tcatcgtaat tcaccttaga
     1081 caatacttgc agggcgatat agggttaatg ttatgccccg tatttattga aggaatgtaa
     1141 aaaaatgttg agtgcgtatt cagagagtta cagccaagct aggcaaatgt ttctggccgt
     1201 atgtgaaaac cggaaactgg aatatttttc agtgataaat ccaaacctag ggccggacgg
     1261 gga
//
LOCUS       DASCNL010000308         1154 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000672124, whole genome shotgun sequence.
ACCESSION   DASCNL010000308 DASCNL010000000
VERSION     DASCNL010000308.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000672124"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1154)
                     /locus_tag="QF359_04210"
     CDS             complement(<1..>1154)
                     /locus_tag="QF359_04210"
                     /inference="COORDINATES: protein motif:HMM:NF027890.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HJO86144.1"
                     /translation="RQAAVAQALANQANATSVLAAAGADVSRTKVNAADLKQEFERKQ
                     TLRKKGVVAVSAVDKAHASWQVAAAQVKASQSQLLAQRSTVEARKAQVKMAQAEVQHA
                     TAQVGQKAAALNIAKVNLNNTFIRSPVDGVVIGRDVDVGQTVAASLQAPILFTIAQDL
                     RKMQVETNIDEADIGQIRSGQTATFSVDSFPGQEFKGIVNQVRKKPQTVQNVVTYTVV
                     IAANNADLKLLPGMTANVQVQVSDRRNVLKLPNRSLRFVPPGLTPKPQTAGAQAGPGG
                     GGTRGGAGGGPPNREARRAQAQARMKRLVEKVGLTEDQQQQVRDFGRQMIRRIRTLAQ
                     GGRGPSFRDTIRKMRQENDKRIFTILTPEQKVKYRLMIAERRSNPVTPGR"
BASE COUNT          230 a          326 c          301 g          297 t
ORIGIN      
        1 cctccctggc gttactggat tggagcggcg ctcggcaatc atcaaacggt attttacttt
       61 ttgttcaggc gtcaaaatcg taaaaattcg tttatcattc tcttggcgca ttttgcggat
      121 ggtgtcgcgg aaactcggac cgcggccgcc ttgggccagc gtgcgaattc gccggatcat
      181 ttgccggccg aaatcccgaa cttgttgctg ttgatcttcg gtgagaccga ctttttcaac
      241 caaccgcttc atgcgcgcct gagcttgtgc ccgtctggcc tctcgattcg gtggtccgcc
      301 tccagcacct cccctggtac cgccaccacc aggaccagct tgagcccccg cggtttgcgg
      361 tttcggcgtc aggccgggtg gcacaaaacg caatgaccga ttgggcaatt tcaagacatt
      421 gcggcggtca ctgacctgca cttgcacatt tgccgtcatg cctggtaaga gttttaaatc
      481 ggcattattg gcagcgataa cgaccgtgta ggtcaccaca ttttgcaccg tttgcggttt
      541 tttacgcacc tgattgacga tgcctttgaa ctcctgtccg ggaaaagaat caacgctgaa
      601 agtggctgtt tggcccgatc tgatctggcc gatatccgct tcatcgatat tggtttcgac
      661 ctgcatcttg cgtaaatcct gagcgatcgt gaacagaatc ggcgcttgca aggaggcggc
      721 aacagtttga ccaacatcaa catcgcgccc aatcaccact ccatccaccg gcgagcgaat
      781 aaaagtgttg ttcaaattca ccttggcaat attaagcgcc gccgcttttt gtccgacctg
      841 agcagttgca tgctggactt cagcttgagc cattttcact tgtgctttgc gggcttcaac
      901 ggtcgagcgt tgcgccaaca attgcgattg tgaggctttt acttgggccg cggccacctg
      961 ccaggaggcg tgcgccttat caactgcgct gacagcaacc acaccttttt tacgcagcgt
     1021 ctgcttgcgt tcaaattcct gtttgagatc agcggcatta accttagtgc gcgatacatc
     1081 ggctccggca gcggccaaaa cagaggtagc gtttgcctga tttgccagag cttgagcgac
     1141 ggcggcctgc ctgg
//
LOCUS       DASCNL010000309         1431 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000674673, whole genome shotgun sequence.
ACCESSION   DASCNL010000309 DASCNL010000000
VERSION     DASCNL010000309.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1431)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1431)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000674673"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="QF359_04215"
     CDS             complement(<1..453)
                     /locus_tag="QF359_04215"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO86145.1"
                     /translation="MSGKKIDPTTISTVWHSMQTATKEMRYIIDRTCQNMLISQLHDV
                     SCGLWGADGSTIAVPVGLPVQFLGGEFPIKDLIKKYPDDMAPGDVFLSNDPYHGGHAN
                     HLPDWAFFRPIFYNDELLFFTMTRAHQQDTGGSFPGGYFPNGHDIHAEG"
     gene            complement(453..>1431)
                     /locus_tag="QF359_04220"
     CDS             complement(453..>1431)
                     /locus_tag="QF359_04220"
                     /inference="COORDINATES: protein motif:HMM:NF039581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJO86146.1"
                     /translation="GKGDEPTVTDADLVLGILSADFFLGGDINLDVERSKTAIEKVAK
                     TLEMDVVEAAHSIFTLANMSMADEIIKVSTKRGYDVRQATMIGGGGGGPVHAGFIADR
                     LNIPSVIIPSVASLYSAFGMYAMDIGEDYARSHVRRVDATEPSEIDTLYQEMETEALA
                     AFEKIGIKKDLVKFRRTIDMRYIGQFHEVEVDVEGGDFTAESLANATEGFGAKHFELF
                     TFSMPWKGVELLTLRVKATTPNAPFQLPEISSGGPDAGAAKKLIRQCYFGEKFIDVQV
                     YDGSKLTATNEILGPAIIEETTTTVVIPENYDCLVNANKNYVLTRKGES"
BASE COUNT          353 a          368 c          350 g          360 t
ORIGIN      
        1 gccttcggcg tgaatgtcat ggccgttcgg gaaataacca ccggggaaag aaccgccggt
       61 gtcctgctgg tgggcccggg tcatggtaaa aaacaacagc tcatcattat agaaaatcgg
      121 ccggaaaaaa gcccagtcgg gtaaatggtt ggcatggcca ccgtgatagg ggtcgttgga
      181 tagaaagaca tctccaggcg ccatgtcatc ggggtatttc ttaatcaaat ccttaatcgg
      241 aaattcaccg ccgaggaatt gaaccggcag tcccaccggt actgcgatgg tggagccgtc
      301 ggcaccccag agcccgcagg agacatcatg cagctggctg atcagcatgt tctgacaggt
      361 gcggtcaatg atgtagcgca tctctttggt cgctgtttgc atcgaatgcc aaaccgttga
      421 gatcgtcgtg ggatcaattt ttttaccact catcagcttt ctccttttcg ggtcaaaacg
      481 tagttcttat tggcattcac cagacaatca taattttccg gaatgaccac ggttgttgtc
      541 gtttcttcaa tgattgccgg tcctaaaatt tcattggttg ctgtaagttt actgccatca
      601 taaacttgaa catcgataaa tttttcaccg aagtagcact ggcgaataag ttttttagcc
      661 gcccctgcat ccggtccgcc acttgaaatc tctggcaatt ggaagggcgc gttgggcgtt
      721 gtcgctttaa ctcgaagggt caataactca acgcctttcc acggcattga aaaagtgaag
      781 agttcgaaat gcttggcgcc aaaaccctcg gtggcattag ctaagctctc ggcggtgaaa
      841 tcaccacctt caacatcgac ttcaacttca tggaactggc cgatatagcg catatcaatg
      901 gtgcggcgaa acttgacgag atctttttta atgccaattt tttcaaacgc cgccaacgcc
      961 tctgtttcca tttcctggta aagggtgtcg atttcacttg gctcggtggc atcaacccgg
     1021 cggacgtgtg agcgcgcata atcctcgccg atatccatcg cgtacatgcc aaaggcacta
     1081 tagagcgacg ctaccgatgg gataataacc gacggaatat taagccggtc agcaataaat
     1141 ccggcatgca ccgggccacc cccaccgccg ccgatcatcg ttgcctgacg gacatcgtag
     1201 ccacgcttgg tcgaaacctt gatgatttca tccgccatcg acatattggc gagggtgaat
     1261 atcgaatggg cggcttcaac cacatccatt tccaacgttt tggcgacctt ttcgatagca
     1321 gttttggagc gctcgacatc gaggttaata tcaccgccta agaagaagtc agctgataat
     1381 attcccaaaa ctaaatcggc atcggtaacc gttggttcgt cgcctttgcc g
//
LOCUS       DASCNL010000310         1174 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000679030, whole genome shotgun sequence.
ACCESSION   DASCNL010000310 DASCNL010000000
VERSION     DASCNL010000310.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1174)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1174)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000679030"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(422..895)
                     /gene="greA"
                     /locus_tag="QF359_04225"
     CDS             complement(422..895)
                     /gene="greA"
                     /locus_tag="QF359_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HJO86147.1"
                     /translation="MEKVPMTAGGLSALEEELKHLKFVERQKVVKAIEVAREHGDLSE
                     NAEYHAAREKQSFIEGRVLELESIISLADVIDPKTLSGDIVRFGATVGLADENTDEET
                     KFQIVGTHEAEVEKGRLSIISPTARALIGKSLGDSVEVTTPGGSKSYEIIKVQYK"
BASE COUNT          349 a          266 c          248 g          311 t
ORIGIN      
        1 aatattaatt aaatggaaat aatttataat atttattttg aatatgagat aaattaagta
       61 ttaatagaaa gctcactcaa attagcaaaa gagacattaa aatgagcaaa gactgcacta
      121 aagaactaaa tgtagtaaaa aaatgcagaa agaagacatc tagaaactgt tgaaagactt
      181 gaccaataaa tggccaataa ctccaaccca gattcaagaa aagtgcgccg tctaaatcaa
      241 caggttgatt gttggctctt tctcattacc cccatgataa cacctaaatg gcgttagatg
      301 ggtcagcctc aattataata taaaatatgg tggggccaaa ggcgggtttt tcagatccgc
      361 gctaaaaaat taattcggtg acagccacct aattactgac acctaattaa cgaatctctc
      421 tctatttata ttgaaccttg atgatctcgt aggatttgga gccgccgggg gtggtgacct
      481 cgacgctatc gcccaaagat ttgccgatca gcgcgcgggc ggtcggtgag atgatagaca
      541 aacggccttt ctcaacctcg gcttcatggg tgccgacgat ttgaaatttg gtttcttcat
      601 ccgtgttttc atcggccagt ccaacggtgg cgccaaagcg cacaatatcc ccggaaagtg
      661 ttttcgggtc aatcacatca gccaggctga tgatcgactc gagttccagc acccggcctt
      721 caatgaaact ctgcttctca cgtgcagcat gatactcggc gttctctgac agatcgccat
      781 gttcacgggc aacttcgatt gctttaacca ctttctgacg ctcgacgaat ttcaaatgct
      841 ttaattcttc ttccaaagcc gataatccac cggccgtcat tggaaccttt tccataacaa
      901 caaaccttaa taatttagca tcacaataat ttgctgataa tcagcaaaaa aacttggggc
      961 ccgcgattta taaccgcagg gtaaccgaga ttaaattaat catgctgaat tcttagcata
     1021 ggattgtaga ggagcaactt caagtccctt atcggtattt gctccttgag catcttgcat
     1081 gcggatcgcg ccaaccgctg ccgccgcgcc ggccatggtc gtgtagtggg ggacattatt
     1141 ggtgagcgcc gagcttcgga tagaaaagct atcg
//
LOCUS       DASCNL010000311         1953 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000682248, whole genome shotgun sequence.
ACCESSION   DASCNL010000311 DASCNL010000000
VERSION     DASCNL010000311.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1953)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1953)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000682248"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /locus_tag="QF359_04230"
     CDS             complement(<1..413)
                     /locus_tag="QF359_04230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86148.1"
                     /translation="MNRNKVLVAITSLIAIYHFLVVGQIPTWFRIFVPHEVHLAVSIS
                     SALILIYLLLPAGGKKHGEDTEAEGRFRKVPWYDWVVLVSGLTGAGFVIFFHESILDY
                     GEYGFLDTKGIILAAMLAVPVLEAVRRTTGWALPI"
     gene            complement(502..1506)
                     /locus_tag="QF359_04235"
     CDS             complement(502..1506)
                     /locus_tag="QF359_04235"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HJO86149.1"
                     /translation="MPIILMATLIGLGQIAVANSVQAQDAVRIGTSSVGSVFYTIVVG
                     ASEVITKHAKINATAEPVGGSSANVRGLGAKKVEFALANSFAAFSGFNGTYSFKKSGK
                     VPVRLVVQAQASNRWLVLRNGANIKNIKALNGKTIIAKRRALPEIALVMDAIIKVNGL
                     DKSSLKLVATTNTGQLVKSIRGGSVDAAVMPFSSRSPQVQKPIHDGVMNFYYPPKATR
                     DAMLKHLPPMFWAADFKPGSFGKNQIKPVHMLGLNSYFLTRPGVSNDTVYKVTKAILE
                     NTKEFATYHKAARAWNIKRVLKNVALPFHPGAVRYFKEKGIWTPAHEANQKSLIANSG
                     "
BASE COUNT          531 a          472 c          440 g          510 t
ORIGIN      
        1 atgatcggca atgcccagcc tgtggtccgg cgtacggctt ccagtaccgg cacggcaagc
       61 atggcggcta ggatgatccc tttggtatct agaaagccgt attcgccgta atccaaaata
      121 ctttcatgga aaaaaataac gaagcccgcc ccggtaagcc cggaaaccag caccacccaa
      181 tcgtaccacg ggactttgcg gaagcggcct tcggcttcag tatcttcacc atgcttttta
      241 ccaccggctg gtagcaacag gtaaatcaag atcagagccg aggatatgct gactgcgaga
      301 tggacctcat gcggcacaaa tattcgaaac catgtcggga tttggccaac cacaagaaaa
      361 tgatagatcg caataagcga ggtaatcgcc accagcactt tgttgcggtt catttgctgc
      421 cgatacctat ttttaccaaa aatataccgc catccaaata gcctggaaga ttcagtcgaa
      481 cggcgccaat ttaaatttca cttagccgga attggcgatc aaagattttt gattggcttc
      541 atgcgccggt gtccaaatac ctttttcctt aaaatagcga acagcacccg gatggaatgg
      601 cagagcgaca tttttcagca cccgtttgat attccaagcc cgtgccgctt tgtgataggt
      661 ggcaaattcc ttggtgtttt caagtatagc cttggtcact ttgtagacgg tgtcatttga
      721 aacaccagga cgcgtcagaa aataggagtt caagcccagc atgtgaaccg gcttaatttg
      781 attttttcca aacgaaccag gcttgaaatc ggcagcccaa aacatcggcg gtaaatgctt
      841 aagcatggcg tctcgtgttg ccttaggcgg atagtagaaa ttcatcacgc catcgtggat
      901 cggtttttga acttgcggcg agcgcgaact aaacggcatc acagctgcat caacactgcc
      961 accccggatg gatttaacca actgtccagt attggtcgtt gcaaccaatt tcagcgagct
     1021 tttatccaat ccattaactt taataatggc atccatgacc aatgcaattt ccggcaacgc
     1081 ccggcgtttg gcgataatcg ttttgccatt cagtgctttg atatttttta tatttgcgcc
     1141 attgcgcaaa accagccaac gattgcttgc ttgcgcctgg accaccagtc gcaccggcac
     1201 tttgcccgat tttttaaagc tgtaggttcc gttaaagcct gagaacgcgg caaaggaatt
     1261 cgccaaggca aattctactt tctttgcgcc gagcccccga acattggcag aagaaccgcc
     1321 aacaggctca gccgtcgcat ttattttggc gtgtttggtg ataacttccg atgcgccgac
     1381 aacaatcgtg taaaacacac tgccaacact agaggtgcca atcctgacag catcttgagc
     1441 ttgaaccgaa ttggcgaccg ctatttgtcc caagccaatt aaagtggcca ttagtataat
     1501 tggcattgcc tatttgccta agttttttgt cgagactgaa tcagaaatag atatggataa
     1561 acccgtttta ccggcatggt aatcgaaaga agttccagtc tacgcttaat atccaaaaca
     1621 tcgccataga agcaaaaaaa tagcagtatt tatcgatctc tggcagcaac ggattgggga
     1681 attaggcatg cttttccatt tgcattaacc ggcccaaaaa ttcaagaaaa taatagaaga
     1741 ataattcatc gaaaatacgt ccgcttttgt gtgcaaagcg gtcgtaaata gtcggtgctt
     1801 attacgtctc ctgttgaccc gaatgtatgg accgaccgtg tgttgcaaga attaatttga
     1861 gatagcgggt ttggtcatgc gttaatgtat tcggcttcat tgtggaactt atgttccgag
     1921 ccatcatggg tatcagcgca cattcgatct cat
//
LOCUS       DASCNL010000312         2107 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000682257, whole genome shotgun sequence.
ACCESSION   DASCNL010000312 DASCNL010000000
VERSION     DASCNL010000312.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000682257"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1563)
                     /gene="mutS"
                     /locus_tag="QF359_04240"
     CDS             complement(<1..1563)
                     /gene="mutS"
                     /locus_tag="QF359_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HJO86150.1"
                     /translation="MMAQYLTIKRDNPNCLLFYRMGDFYELFFEDAVIAAQALDITLT
                     KRGKHLGEDIPMCGMPVHSHESYLSRLIRQGFKVAVCEQTEDPVEAKKRGSKSVVRRE
                     VVRTITPGTLTEDTLLDSKRNNFLAALAEAQGSFGLAWLDMSTGDLQMQPLSEHSVAA
                     ALARLDPGEVLISDRMLRREDLADAFQPWLDQLSALPASKFDSTNGDLRLQAMFEVKT
                     LDAFGPFSRAELSAGGALIDYVELTQQGQLPRIAPPKRLSEGAVMEIDAATRRNLELT
                     QTLTGERKGSLLSTIDQTLTGAGGRLLASYISAPLTDSSTINKRLDMIQHFYNDHSLR
                     ENLGDLLKQVPDIERALSRLTLARGGPRDLAVIRDGLALTADIRACLESTHLPDGIKA
                     ALDDFGAHEELVLTLTEALAPELPLYARDGGFIAEDYAPAFDELRLLRDESRRLIAGL
                     QDKYVQAAGIQNLKIKHNNVLGYFIEVSTRQAEAMPAGPEDIFIHRQTMKNAVRYTTV
                     ELGELEGKIASAA"
     gene            1819..>2107
                     /locus_tag="QF359_04245"
     CDS             1819..>2107
                     /locus_tag="QF359_04245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HJO86151.1"
                     /translation="MAKKSTIDKDLKRVVQLEKATAKISQNNINLGFSVLFLIGVLIF
                     AAFQTTSLEGGTILIVAAIIGGYMALNIGANDVANNVGPAVGSKAITLIGAL"
BASE COUNT          517 a          551 c          506 g          533 t
ORIGIN      
        1 ggcagcgctg gcgatcttgc cttccaactc gccgagttcg acggtggtgt agcggacggc
       61 attcttcatg gtttgacgat gaatgaatat atcttctggc ccggctggca tcgcttccgc
      121 ctggcgcgtc gacacttcaa tgaaatagcc gagaacatta ttatgcttaa tcttgaggtt
      181 ttgaatgcca gcggcctgga catatttatc ctgcaaacct gcgatcaggc ggcgactctc
      241 atcccggagt aaacgtaact cgtcaaaggc gggcgcatag tcttcggcaa taaaacctcc
      301 gtcccgtgca tagagtggta gttcgggcgc cagtgcttcg gttaacgtta gcaccaattc
      361 ctcatgtgcg ccgaaatcat ccaaggcagc tttgatgcca tccggcaggt gggtgctttc
      421 aagacaagcc cggatatccg ctgtcagggc gagaccatcc cggatcactg ccaagtctcg
      481 tgggccacct ctagctaaag taagccgtga cagcgcccgc tcaatatctg gcacttgttt
      541 gaggagatcg cccaaattct cccgtaagct gtgatcatta taaaaatgct gaatcatatc
      601 caagcgtttg ttgatcgtcg aagaatccgt caacggtgcg gaaatataag acgccagcaa
      661 tctccccccg gcaccagtta aggtttgatc aatggtcgag agtaggctgc ctttgcgctc
      721 cccagttaag gtctgggtca gctccagatt acggcgggtt gccgcatcga tttccattac
      781 ggcaccttca gagagacgct ttggtggtgc aattcttggc agttgtccct gctgggtcag
      841 ctcgacgtaa tcgatcaacg ccccaccggc tgataattca gcgcgggaaa aagggccaaa
      901 agcatccaga gttttaactt caaacatggc ctgtaaacgc agatcgccat tagtcgaatc
      961 gaatttgctc gctggtaaag ccgacaactg atccagccag ggctgaaacg catcggcaag
     1021 atcttcgcgc ctgagcatac ggtccgagat caacacttca ccaggatcaa gccgcgccag
     1081 tgcggctgcc accgaatgct ccgacaaggg ttgcatttgc agatcaccgg ttgacatgtc
     1141 aagccaagct agtccgaaac taccctgcgc ttcggcgagc gctgccagga aattattgcg
     1201 tttgctgtcg agcaaagtgt cttcggtcaa ggtgcccggt gtaatcgtgc gaacaacttc
     1261 gcggcggacc actgatttag agccacgctt ctttgcttcc accgggtctt cggtttgctc
     1321 gcagacggcg accttgaaac cttgcctgat caggcgtgac aaatagcttt catggctgtg
     1381 caccggcatc ccacacatgg ggatatcttc gcccagatgt ttaccacgtt tggtcagggt
     1441 aatatcaagc gcctgcgccg cgatcaccgc atcttcaaaa aacaattcgt aaaaatcacc
     1501 catgcgataa aacagcaaac agttgggatt atcgcgcttg atggtcagat actgcgccat
     1561 cattggtgtt aaacctttgg ccgccgccgt ggccaccgaa tcgttttttg ttttgcttgt
     1621 ttcaagtgcc ggttcggtca cggaatcatc ttctttcaca tattttctac gtttatttta
     1681 ccatgatagc gcgccgacaa cagccaattt aattcacctt aaaattagtc acccaaactg
     1741 tcatattagt gtaatacaag tataatataa gcggtcgctg aaaagatatt tattagcagt
     1801 ttttaacgga ctttcagcat ggctaaaaaa tccaccatcg ataaagattt aaaacgcgtt
     1861 gttcagctcg aaaaagcaac cgcgaaaatc agtcaaaata atatcaatct gggttttagc
     1921 gttctcttcc taatcggtgt gttgatattt gccgcttttc aaacaaccag cctcgaaggt
     1981 ggcaccatcc tcatcgttgc cgctataatc ggcggctata tggcacttaa tataggcgcc
     2041 aatgatgttg ctaataatgt tgggcccgca gttggctcaa aggccattac tttaattggc
     2101 gcgctac
//
LOCUS       DASCNL010000313         1696 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000682674, whole genome shotgun sequence.
ACCESSION   DASCNL010000313 DASCNL010000000
VERSION     DASCNL010000313.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000682674"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            398..>1696
                     /locus_tag="QF359_04250"
     CDS             398..>1696
                     /locus_tag="QF359_04250"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO86152.1"
                     /translation="MEKTMVTKSKTSETETKIVSSTVWSAGAGCHGGCGVNLHIKDGE
                     LVKVEGQESHPYNQGTLCPRALALPEYVHHKDRLMHPLIRRGERGTNTFEQATWEEAL
                     DLIQNRMNESRDKYGPESSIFVQGTGRDVGGWLVFLAYNFGSPNWMQALPGNSCYHPR
                     LLSMKVAIGDFVVPDNSQCHVDRYDNSEWKLPECYMIWGQNPVATCNDGNHGHWIIEC
                     LKRGSKFIVIDPNYTWLASRAKLWLPIRPGTDGALALGMLNVIISEELYDHKFVEKWT
                     TGFDELRERAKEYPVERVSEITWIDKDLIVEAARMYAKAKPAALQWGVPIDFAPEGFT
                     VAQAINHLWCITGNVENPGGQIVAKPAFGVTSYPMGQDAIEAMYGPMMPKEQQAKRIG
                     VDDFPIVRDLHWRAQPDATIDQMLSGKPYPVKSTFVAGSNF"
BASE COUNT          441 a          387 c          440 g          428 t
ORIGIN      
        1 gaacaaaatg cttccaaggc tttgaaaatt gcagattacg ggtacgtgat ttcatctggt
       61 cgtattaccc ataaaggtac aggttcagaa ctcctaagcg atccgagtct aattgatgca
      121 ttcttgggcc ataacctagc gtagctgtac cgtcgggttt gatttttaga ttaaattggc
      181 agtcagttga catttatatc tgggtagcat cagcctggta aagtatgaaa gtatggccgg
      241 ttaattgagg agccaactct ccacttttac ggtacaggcc caggtggacc atatttcaat
      301 tgcagtacag gcccaggtgg accatatttc aattgcaatt gtcatagtga tttaaggcgc
      361 tttcataagt accattggaa aaaattgatc gactgtgatg gagaaaacca tggtgactaa
      421 atctaaaaca tcagaaaccg aaacaaaaat tgtttcttct acagtctggt ccgctggcgc
      481 tggctgccat ggcggttgtg gcgtaaatct gcatatcaaa gacggtgagc tcgtgaaagt
      541 ggaaggtcag gaaagtcatc cctacaatca gggaacgctt tgcccgcggg cgctcgcatt
      601 gcccgagtat gtgcatcata aagaccggtt gatgcatcca ttgatccgcc ggggcgagcg
      661 ggggaccaat actttcgaac aagcgacttg ggaagaggct ttggatttga tccaaaaccg
      721 tatgaacgaa tcgcgtgaca aatatggtcc cgaatcgtcg attttcgttc aaggaaccgg
      781 acgggatgtc ggcggatggc tggtattttt agcatataat ttcggcagtc ctaattggat
      841 gcaagccctg ccaggaaatt cctgctatca cccgcggcta ctttcgatga aagtcgccat
      901 aggagatttt gtcgtacccg ataattccca gtgccatgtc gaccgctatg acaattccga
      961 atggaagcta cctgagtgct atatgatctg gggtcaaaac cccgtggcga cttgtaatga
     1021 tggcaatcat ggacattgga taattgagtg tctgaagcgt ggatcgaaat tcatcgttat
     1081 tgatccaaac tatacctggt tagcgtcgcg agcaaaactt tggttgccga tccggcccgg
     1141 tacggatggg gcacttgctt tgggtatgct aaacgtcatc atcagcgaag agctctatga
     1201 ccataaattt gtcgaaaagt ggacaaccgg tttcgacgag ttgcgagagc gggccaagga
     1261 gtatccagtt gaacgagtct ccgagatcac ctggatcgat aaagatctca ttgtggaagc
     1321 cgcccgcatg tacgccaaag ctaaaccggc cgctctgcaa tggggtgttc ccatcgattt
     1381 tgctccggaa ggatttactg ttgcccaagc cattaatcat ttatggtgca tcacgggtaa
     1441 tgttgagaat cccggcggac aaatcgtggc caagccggcg ttcggcgtga cctcttaccc
     1501 catggggcag gacgccatcg aagccatgta cggccccatg atgccgaaag aacagcaagc
     1561 caaacgcatc ggcgttgatg attttcccat cgttcgtgat ttgcattggc gggcgcaacc
     1621 ggacgcgacg atagatcaga tgctttcggg caaaccctat ccggtaaaat caacctttgt
     1681 ggctggctcc aatttt
//
LOCUS       DASCNL010000314         4949 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000684358, whole genome shotgun sequence.
ACCESSION   DASCNL010000314 DASCNL010000000
VERSION     DASCNL010000314.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4949)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4949)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4949
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000684358"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            346..756
                     /locus_tag="QF359_04255"
     CDS             346..756
                     /locus_tag="QF359_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HJO86153.1"
                     /translation="MEIVGNSLNELPWFFAHMATAIALTLFYVVIYMWVTPHPEIKLI
                     RENNIAASLAFAGSLIGFCVPLASAIANSVSLADVAVWGVVALLVQIVIFFLVCIPIP
                     KISERIEKGEMASGLWLGSTSLAGGLLNAASMTN"
     gene            827..1369
                     /locus_tag="QF359_04260"
     CDS             827..1369
                     /locus_tag="QF359_04260"
                     /inference="COORDINATES: protein motif:HMM:NF018408.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HJO86154.1"
                     /translation="MKSRKSVFAVLMMSTSLIALTACEEPKVDASIYESLEQCKRDPL
                     NTPDQCDSSFKEAQSQHAAVAPKYATAEDCQADFGKEKCEVAPYRTSSGGSVFMPLMA
                     GYMMGSLLGGRGSMMSQPLYRSSQSPNSFRTAENRNVGSKTGRTTVAKSATSRPRFKS
                     ATRSRGGFGSSGRRFGSGAT"
     gene            1404..2570
                     /locus_tag="QF359_04265"
     CDS             1404..2570
                     /locus_tag="QF359_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HJO86155.1"
                     /translation="MQRIPVTERPNLAAAAAEHELEYVAGSGVTGWDESAYYQFTPQQ
                     IEENIVKPAEELEELCFQVVDRAVNTEEVLDRLCIPEYFWDYIATSWRNGDKNLYGRM
                     DLSYNGTGPAKLLEYNADTPTTLYESAVFQWEWLEQAAELKLLPEGVDQLNDVHEKIV
                     ETLPQLGVAGLSHFACNQDIEDDTGTLEYLEECAREAGLETCILGMEDIGLNDQGQFT
                     DLEDRVISTLVKLYPWEWIMAEDFGRHVPASGAQFIEPPWKAIFSNKGLLPLLWGMFD
                     GHPNLLPAFFEDDPAAADFTDTGTYVRKPMLSRQGANIEIVQEGKTIFHSDGPYGEDP
                     HILQGFEPLPEFDEGYPLLGCWLVASKAVGLCIREDKTLATGKEARFVPHVILD"
     gene            2608..3018
                     /locus_tag="QF359_04270"
     CDS             2608..3018
                     /locus_tag="QF359_04270"
                     /inference="COORDINATES: protein motif:HMM:NF014705.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine decarboxylase"
                     /protein_id="HJO86156.1"
                     /translation="MDDENMIGGDETTKDQYGIELILDLHGCDASKFTRASITKYFEQ
                     LCDLIDMQREDLHFWDDVGLSEEDKQTSPHTQGTSAVQFILTSSIVIHTLDQLNAIYI
                     NIFSCKVYDPKVAEDYTVEWFGATDCSARFIDRV"
     gene            3035..4396
                     /locus_tag="QF359_04275"
     CDS             3035..4396
                     /locus_tag="QF359_04275"
                     /inference="COORDINATES: protein motif:HMM:NF023233.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3326 domain-containing protein"
                     /protein_id="HJO86157.1"
                     /translation="MTERQIQIPVSPGHRNMLDHIQKAFEFRVEEDAIPVRFAITHMD
                     EDHYQCEFGTLSGLDVPADEKPDSIFGFMPRKIERTDDFNAVFLVPTGIGAEIGGHAG
                     DATPAARVLAEACDRLITHPNVVNASDLNEMPENALYVEGSAITRLMMGTAALQPVRT
                     NRVLVIMDDHEIQMFANDTVNAISAAQATYGLDCPKIVKLDPPMRMTAEFMKSGRAAG
                     EITGLDRVQAVLDENLGTFDAVAIASVIDLDEETHEEYFQRDGKMINPWGGVEAMLTH
                     AVSMLYEIPAAHSPMLENHTVANFDLGLVEPRLAAEAVSLTFVQCMLKGLHRSPRIVS
                     DADAMRESGVLTAADVSCLVIPDKCVGLPTLAALEHGIPVIAIRENDNLMQNDLEALP
                     WASNQLHRVDNYWEAVGVMTALKAGITPSSLRRPLAATKVEKRKFETERARQDESLKE
                     IKF"
     gene            4478..4768
                     /locus_tag="QF359_04280"
     CDS             4478..4768
                     /locus_tag="QF359_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HJO86158.1"
                     /translation="MRWRQSDVCFTPESGLVSAVANNSGLSKSDAEKADEGVFDSISG
                     ALSSGGEVRVVGFGSFSVVDRKATTGCNPRTGEAIQIPASKRPKFKAGKGLK"
BASE COUNT         1268 a         1248 c         1259 g         1174 t
ORIGIN      
        1 taagaaaatt caaacaggtt acatagcgat attagcgagg ctagcggatg cggacaaggg
       61 gctattaaac accgctcaaa tttagtgacc cactacattt atcgggaaat tgattggcac
      121 ggcattcggg aggtcgcaat cagttcagcg gtgctgtcag acgaatgcga actcgtctca
      181 gtatggcatt gataagccaa tttttgcaat atctttgcca cgcaattgtc tatagttgcg
      241 tgttgctaga gattggtgga atcgctgtga aatctgcttt cgatggatta cgcactgtga
      301 tagtgtcctc ggctcctaaa cataacgact aaggggtatg gtaatttgga aatagttggc
      361 aattcgctca acgagctacc gtggtttttt gcccatatgg caacagctat cgctcttacc
      421 ttattctatg tcgtcattta catgtgggta acgccgcacc ccgagatcaa actaattcgg
      481 gaaaacaata tagcggcttc gctggccttt gctggcagct tgattggttt ttgcgtacca
      541 ctggccagcg caatcgctaa ttcggtctct ttagcagatg ttgcggtttg gggcgttgtc
      601 gccttacttg tccagattgt tattttcttt ctcgtttgca tacccatacc taagatttca
      661 gaacggatag aaaaaggcga gatggcaagc ggcctgtggc tgggtagcac ctctttagct
      721 ggcggcctgc tcaacgcagc ttctatgaca aactaaacat aaaccctatg ccatttatgc
      781 gcgatgcgta gcgttgaaaa agtaacatcc gatcggagag aattagatga agtcccggaa
      841 atccgtattt gccgttttaa tgatgagcac gagtctgatc gctctgaccg cctgtgaaga
      901 accgaaagtc gatgcgtcaa tttacgaaag tctagagcaa tgcaaacggg acccgctcaa
      961 taccccagac caatgtgaca gtagctttaa ggaagcccaa agccagcacg cggccgtggc
     1021 ccccaaatat gcgaccgcag aagattgcca agctgacttt ggcaaagaaa agtgcgaggt
     1081 cgcgccctat agaacatcaa gcggcggctc ggttttcatg ccgttaatgg cgggctatat
     1141 gatgggctct ttattaggcg gacgcggctc catgatgtcg cagccgcttt acagatcctc
     1201 ccagagcccg aacagttttc gcaccgccga gaatcgcaat gtcggctcaa aaaccggacg
     1261 gacgactgtt gccaaatcag ccaccagccg gccaagattt aaaagcgcga ctcgttcgcg
     1321 cggcggcttt ggctcttccg gtcgccggtt tggatctggc gccacttaat tagacgaatt
     1381 ctacccttca tttcggagac ctcatgcagc gcattcccgt gactgaacga cccaatttgg
     1441 cagctgctgc agccgaacat gagttggagt atgttgccgg tagcggcgtc acgggttggg
     1501 atgaaagcgc ctattaccaa ttcacaccgc agcagatcga agaaaatatt gttaaacccg
     1561 ccgaagaact tgaggaattg tgtttccagg ttgtcgaccg cgcggtgaat accgaagaag
     1621 tcttagaccg cctctgtatt ccagaatatt tttgggacta cattgcaaca agctggcgca
     1681 acggtgataa aaatctatac ggcagaatgg acctttccta taacggcacc ggaccggcaa
     1741 aattattaga gtataatgct gacacaccaa cgactcttta tgaatctgcg gtatttcaat
     1801 gggaatggtt ggaacaggcc gcagagttga aattgctccc agaaggcgtc gaccagttaa
     1861 acgatgttca tgaaaaaatc gtcgagactt taccgcaact tggtgtcgcg gggctgtcac
     1921 attttgcctg taatcaggat attgaagatg ataccgggac cctcgagtat ctagaagaat
     1981 gtgcgcgcga agcggggcta gagacctgta tcttaggcat ggaagacata ggtttaaacg
     2041 accaaggaca gtttaccgat ctcgaggatc gggttatttc aactctggtt aaactctacc
     2101 cctgggaatg gatcatggca gaggatttcg gccgccatgt gcctgccagc ggcgcccagt
     2161 ttatcgaacc accttggaag gcgatttttt ccaacaaagg tcttttacca ttgttgtggg
     2221 gaatgttcga cggccacccc aatctgctac ccgctttttt cgaagatgat cccgccgccg
     2281 ccgactttac cgacaccggc acctatgtcc gcaaaccgat gttgtcacga cagggagcca
     2341 acatcgagat tgttcaggaa ggcaaaacga tcttccacag cgacgggcca tacggtgagg
     2401 accctcacat cctacaaggg ttcgaaccgc tgccggaatt tgacgagggc tacccacttc
     2461 tcggctgctg gctggttgcc agcaaagcgg ttgggctatg catacgcgag gacaaaaccc
     2521 tggccaccgg caaagaagcc cgctttgttc cgcacgtaat cctcgactaa gattctttat
     2581 ttaaattgat ttacgcagag acccatattg gatgatgaaa acatgattgg cggagacgaa
     2641 acaactaaag atcaatacgg cattgagttg atcctcgatc tgcatggatg cgacgcgtca
     2701 aaattcaccc gcgccagcat caccaaatat tttgagcagc tatgcgacct gatcgatatg
     2761 cagcgcgaag atttgcattt ctgggatgat gttggtctgt cagaagaaga caagcagacc
     2821 tcgccgcaca cccagggcac gtcagctgtc cagttcatct tgaccagctc catcgtcatc
     2881 catacgctag atcaattaaa tgcaatctat atcaatattt tctcctgcaa ggtctacgat
     2941 cctaaggtag cagaagacta cacggttgaa tggtttggcg cgacggattg ctcggccaga
     3001 tttatcgacc gggtttaagg gcgaacacat gcaattgacc gaacgacaaa tccagatccc
     3061 ggtatcaccc ggccaccgca acatgctgga ccacatccag aaggccttcg aattccgggt
     3121 ggaagaagac gcgatcccag ttcgctttgc catcacccat atggacgaag atcattacca
     3181 atgcgagttc ggcacactaa gcgggctgga tgtcccagcc gatgaaaaac cagacagcat
     3241 ctttggcttt atgccgcgca agatcgaacg cacggatgac tttaacgctg tcttcctggt
     3301 gccaaccggt atcggcgcag agatcggtgg gcatgctggc gatgcgactc ctgcggcacg
     3361 cgtgctagca gaagcgtgcg atagattgat cacccatccc aatgtcgtca acgcttccga
     3421 ccttaacgag atgccggaga acgcgctcta tgttgaaggc agcgcgatta cgcggctgat
     3481 gatgggaacc gccgccttgc agccggtgcg gacaaaccgg gtattggtga ttatggacga
     3541 ccacgaaatc caaatgtttg ccaacgatac agtcaacgcc ataagtgcag cgcaagcgac
     3601 ctatggcctc gattgtccta aaatcgttaa actcgatcca ccgatgcgca tgaccgcaga
     3661 atttatgaaa tcaggtagag ccgctggcga gattacagga cttgatcgcg tccaagctgt
     3721 gttggatgaa aatctcggca cgtttgatgc cgtcgccatt gcttccgtta tcgatcttga
     3781 tgaagaaacc cacgaagaat atttccagcg cgatggcaag atgatcaacc cttggggcgg
     3841 cgtagaagcc atgctgactc acgccgtgtc gatgctctat gagatccccg ccgcccattc
     3901 gccgatgctt gaaaaccaca cggtcgccaa ttttgatctc ggtctggttg agccacgcct
     3961 cgccgccgaa gcagtgtcgc taacctttgt gcaatgcatg ctaaaaggac tgcaccgcag
     4021 cccacgcatc gtttcggacg cggatgccat gcgcgagtcc ggcgtgctca cggccgccga
     4081 tgtctcttgt ctagtcattc cagacaaatg cgttggactg ccaacgctag ccgctctgga
     4141 acacggtatc cctgttattg ccatccgcga gaatgacaac ttgatgcaaa acgaccttga
     4201 ggcccttccc tgggcatcga accaattgca tagggtggac aactattggg aagccgtcgg
     4261 cgtgatgacc gcactaaaag ccggcatcac cccctcatcc ctacgccgac cattggctgc
     4321 tacaaaggta gagaagagga aattcgagac cgagcgagct aggcaggatg aatcacttaa
     4381 agaaatcaaa ttttagatga gtgttgatgt ctgcctttag ctaatagcag acgtttccgg
     4441 acgttatcct aatatccgct tatggataat agccgacatc aggtggcgtc aaagtgacgt
     4501 ctgctttacc cccgaaagcg gactcgtttc tgcggtagct aacaattctg gtttgtccaa
     4561 atccgacgct gaaaaggcag acgaaggtgt ctttgattcc atttccggtg ccttgtctag
     4621 cggtggcgaa gtccgtgtcg ttgggttcgg ttctttctcc gtagttgacc gcaaagcgac
     4681 cacgggttgt aatccgagaa ccggtgaagc gattcaaatc ccggcatcga agcgacctaa
     4741 attcaaggcc ggtaagggat tgaagtaagc ggtgaactaa accaagaatt tttaaataaa
     4801 tgccgactgc ggtaacgtag ccggcattct ttcttttggg gacgaattaa ttcatttatg
     4861 ggattaaggg ataaagagcg aatagcccta tctaattaac aggtcgctat ctatcgagat
     4921 gtccgcttat ggctattact tgaaattct
//
LOCUS       DASCNL010000315         1985 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000686546, whole genome shotgun sequence.
ACCESSION   DASCNL010000315 DASCNL010000000
VERSION     DASCNL010000315.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000686546"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            29..1321
                     /gene="aceA"
                     /locus_tag="QF359_04285"
     CDS             29..1321
                     /gene="aceA"
                     /locus_tag="QF359_04285"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004451 - isocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HJO86159.1"
                     /translation="MSSNTENFNNLVPLAPEGRFDGIARPYSPADVEKLRGSVVVSQT
                     LAERGANRLWELLQTENYINSLGAMTGNQAMQQVRAGLKAIYLSGWQVAADANTAGTM
                     YPDQSLYPANAAPELVRKINRTLQRADQIEHSENGAKRDWFAPIVADAEAGFGGPLNA
                     FELTKAFIEAGAAAVHFEDQLASEKKCGHLGGKVLIPTAQHIRNLTAARLAADVMGVP
                     TLIVARTDAESAKLLTSDIDERDRPFIESEERTPEGFYNIRAGVEACIARQLAYAPYA
                     DLLWWETSKPNLDEAKQFADAIHAEFPDKLLAYNCSPSFNWEANLDKETIANFQQELG
                     AMGYKFQFVTLAGFHQLNHGMFELAKGYGERGMAAYSELQQAEFASEQDGYTATRHQR
                     EVGTGYFDAVAVAISGGESSTTAMSESTESDQFDSEAA"
     gene            1334..1597
                     /locus_tag="QF359_04290"
     CDS             1334..1597
                     /locus_tag="QF359_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86160.1"
                     /translation="MEAKTDQKDTETQSGFQSAPPDPDNSFSGGQDSALRMVANSLHR
                     LNEAIVKAADSGLTVELMRASRYHAGSGSWGDQMVPIIERNSK"
     gene            1792..>1985
                     /locus_tag="QF359_04295"
     CDS             1792..>1985
                     /locus_tag="QF359_04295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86161.1"
                     /translation="MKGGAMTTLNKELIYVGDTMCSWCYGFAPTKQKLEEQCAGRAVT
                     TLVVGGLHIDWTEPQDAQRK"
BASE COUNT          488 a          513 c          518 g          466 t
ORIGIN      
        1 acccggtttt gaagaaagga aaaccgttat gagcagcaac acagaaaatt ttaacaacct
       61 ggtccccctg gcacctgagg gccggttcga tggcatcgcc cggccttatt cacctgcaga
      121 tgtcgaaaag ttgcgaggct cggttgtcgt ttctcaaact ttggctgaac gcggcgctaa
      181 tcgcctgtgg gagcttctgc agaccgagaa ttatattaat tcgcttggtg ccatgaccgg
      241 caatcaggcc atgcaacagg ttcgcgccgg cttgaaagca atttatcttt ccggttggca
      301 agttgccgcc gatgccaaca ccgccggcac catgtatcca gatcaaagcc tctatccggc
      361 aaacgctgct cccgagctgg tccgcaaaat taatcgcacc ttgcaacggg ctgatcaaat
      421 cgagcattcc gaaaacggcg ccaagcggga ttggttcgcc ccgatcgttg ccgatgctga
      481 agctggcttt ggcggcccgc tcaacgcctt tgagctaacc aaagcgttca tcgaagccgg
      541 tgccgcagcg gttcacttcg aagaccaatt agcgtcggaa aaaaaatgtg gtcacttggg
      601 tggtaaagtt ctgatcccaa ccgcgcagca tatccgcaat ctgacagccg ctcgtttggc
      661 tgcagacgtt atgggtgtgc cgactttgat cgttgcccgt accgatgcgg aaagcgctaa
      721 attgctaacc agcgatatcg atgagcggga tcgcccgttt attgaatccg aagaacgcac
      781 gccagaaggc ttttacaata tcagagccgg tgttgaagct tgtattgcgc gtcagttggc
      841 ctatgcgcct tatgctgatt tgctgtggtg ggaaacttcc aaaccaaatc ttgatgaagc
      901 taagcaattt gccgatgcga tccatgctga attccccgat aaattattgg cttacaattg
      961 cagcccaagc ttcaactggg aagccaatct ggataaagaa accattgcta acttccagca
     1021 ggaacttggc gccatgggtt acaaattcca gtttgttacc ttggccggct tccatcagct
     1081 taaccacggc atgttcgaat tggccaaagg ctatggcgaa cgtggcatgg cggcttattc
     1141 cgagctgcaa caggctgaat ttgccagtga acaagatgga tacaccgcaa cgcgccatca
     1201 gcgtgaagtt ggtaccggct attttgatgc cgttgccgtg gctatctcgg gtggcgaatc
     1261 ttcaacgaca gcaatgtccg aatcgaccga gtcagatcag ttcgattctg aagcagcttg
     1321 aaggagacga gttatggaag caaaaaccga ccaaaaagat acggaaaccc aaagcggctt
     1381 ccaatctgca ccaccagatc cggataacag tttttccggc ggccaggata gtgcgctgcg
     1441 tatggtggcc aattccttac accgcttgaa cgaggctatt gtgaaagcag cggattccgg
     1501 cctgaccgtc gagctgatgc gggcgtcacg ctatcacgct ggttcgggca gctggggtga
     1561 ccaaatggtg ccgattatcg agcgtaattc taaatagtta ttagttcgca taatatttcc
     1621 cggggcagtc ggttctgccc atatctcaaa cccgtctgct ggacctctcg ctcatttgag
     1681 gtagctgcca ggaggcgggt ttttttatcc acctcctttt accaaaatgc ggcactggaa
     1741 cattgccaga cagcgggttt tttttcatag tgcaacccta atgccgattg aatgaaaggt
     1801 ggcgctatga cgacgctcaa caaagaatta atttatgtcg gtgatacaat gtgttcctgg
     1861 tgctacggct ttgcaccgac caagcaaaaa ctagaagaac aatgtgccgg ccgcgccgtc
     1921 acaactttgg tcgtcggcgg cttgcatatc gattggaccg agccgcagga tgcgcaacgc
     1981 aagaa
//
LOCUS       DASCNL010000316         1355 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000687015, whole genome shotgun sequence.
ACCESSION   DASCNL010000316 DASCNL010000000
VERSION     DASCNL010000316.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000687015"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1355
                     /locus_tag="QF359_04300"
     CDS             <1..>1355
                     /locus_tag="QF359_04300"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3394 domain-containing protein"
                     /protein_id="HJO86162.1"
                     /translation="IPVLRKVFFTGVHFIIPIVVLVYLLMVERWTASSAVFYTIMVMF
                     LIMFATRISPSNMSRAVMTVLYIIPIVVAAAFRFSGAQTQPALFWGLGAAVLIVIGLG
                     LIKNSKEGCAIAGLKEAIVEIYGGLIAGARNMVGIAVAVATAGIIVGAVSSTGLNNAM
                     VGVVEALSGGNVFILLILTAVLSLILGMGLPTTANYLVVASLLAGVLVELGTAAGLEL
                     PLIAVHLFVFYFGLMADSTPPVCLAAFAASAISRADPLKTGFQAFTYDIRTAILPFVF
                     IFNPELLLIGVTSVWHGVMVFVVSLIAIFCFTSATQGWLIIKTNIAERVVLLAIMFAL
                     FRPDVILGYIYPEYVALDFDKFVANQVQVPENRKIRLHSIRETDYGDRFKLYVLRAPG
                     GNAGQKAFGLKIAKEKDGRYSVADLTPNGMAEKIKMDFGDFVTAVEVEQIDRPAKELV
                     Y"
BASE COUNT          292 a          312 c          345 g          406 t
ORIGIN      
        1 cattcctgtt ttgcgaaaag tctttttcac cggcgtgcac ttcataattc cgattgtcgt
       61 cttggtctat ttgctcatgg ttgagcgctg gacggcgagt agtgcagttt tttacacgat
      121 tatggtgatg ttcctcatca tgtttgcgac gcgtatctca cccagcaata tgagccgggc
      181 ggtgatgacg gttctctaca ttataccaat tgttgtcgcg gcagcctttc gattttccgg
      241 cgcgcagaca caaccggcat tgttctgggg acttggggct gccgtgttga tcgtcatcgg
      301 gctgggtctg ataaaaaaca gcaaagaagg ttgcgcaatt gcaggcctca aggaagctat
      361 tgtagagatc tacggtgggc taatagcggg tgccagaaac atggttggca ttgccgttgc
      421 tgtggcgacg gccggtatca ttgttggtgc ggtatcttca accgggctta ataatgccat
      481 ggtcggcgtg gttgaagcac tttccggcgg caacgtcttt atcctgctta tcctcaccgc
      541 ggtgctttcc ttgattctcg gtatgggatt acccacgacg gctaactatc tcgtcgtggc
      601 ctccttgctg gcaggcgttt tggtcgagct cggcactgca gcaggactgg aactgccact
      661 gatcgcggtt catctgtttg tcttctattt cggcttaatg gcggattcaa caccgccagt
      721 atgcttggca gcctttgctg cctcggccat ttcacgggct gatcctttga agaccggttt
      781 tcaagctttc acttacgata ttcgaacggc aatactaccg tttgtcttta tcttcaatcc
      841 tgagctttta ttgatcggtg tgactagtgt ttggcatggt gtcatggtat tcgtcgtctc
      901 actgatcgct attttctgct tcacctcagc aactcaaggc tggcttatca tcaaaaccaa
      961 tattgctgag agggttgttc tgctggcgat tatgttcgcg ctgttccggc ctgatgttat
     1021 tctaggctat atttatcctg aatacgtagc tttggatttt gacaaattcg tcgccaacca
     1081 agttcaagtt cccgagaaca gaaaaattcg tctgcattcc atacgggaaa cagattacgg
     1141 tgatcgattt aaactttatg tcttaagagc acctggcgga aatgccggac aaaaggcttt
     1201 tggacttaaa atagctaaag aaaaagatgg ccgttattcg gttgccgatc tcacgccgaa
     1261 tggaatggcg gaaaaaataa aaatggattt tggtgatttc gtgaccgccg ttgaagtcga
     1321 gcaaattgac cggcccgcca aagaacttgt ttatc
//
LOCUS       DASCNL010000317         1954 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000691524, whole genome shotgun sequence.
ACCESSION   DASCNL010000317 DASCNL010000000
VERSION     DASCNL010000317.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000691524"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            221..505
                     /locus_tag="QF359_04305"
     CDS             221..505
                     /locus_tag="QF359_04305"
                     /inference="COORDINATES: protein motif:HMM:NF012780.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HJO86163.1"
                     /translation="MPLRIIPDVVNENTSLVCNQNTTMGAAASLMLAQGKGAVVISDH
                     DVLAGIFTERDVSLRVVAGGLDTQTAILRQVMTADPTKVGPTKSAAMSWT"
     gene            505..666
                     /locus_tag="QF359_04310"
     CDS             505..666
                     /locus_tag="QF359_04310"
                     /inference="COORDINATES: protein motif:HMM:NF012780.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HJO86164.1"
                     /translation="MRTGGFRHLPVIDQDQLIGVISIRDIYAAVMQDLEGNFGKAMKE
                     RAKAMLSAS"
     gene            complement(686..>1954)
                     /locus_tag="QF359_04315"
     CDS             complement(686..>1954)
                     /locus_tag="QF359_04315"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO86165.1"
                     /translation="ITAVLINTPGTPAAAATAIDGYPMTLKGEAGKGLGMSLIASTIG
                     GIFGVIILIVFAVPLAKLAISFHPADYFALAIFGLTTVGSLGGGNVSKAMVAVLFGLI
                     INTVGLDPISGVSRYSFGIDQLYDGFSLIPALIGLFALSVVFTAFEKGQFGSTTLDKV
                     SGKFPNVLECWKTKYTIVRSSVLGTIIGIFPGAGATIASFISYNIAQRSSKEPETFGK
                     GAIDGVAASEAANSSSVGGALIPLLALGIPGSATDAVLIGALQLHDITPGPLLFESNP
                     EIVYGIFASLIIANAVMLFLGIFGVRYFAKVVEVPASVLYPMILTIALIGSFAVQNSF
                     FDVGACFAFGVIGWIFKRYDYPVAPIVLGIVLGSLLEENFRRAVMMEGPTVFLTQPLA
                     ATMLAIAGLLFLWPIYRSYRSKKADQEISS"
BASE COUNT          543 a          490 c          483 g          438 t
ORIGIN      
        1 gattggattg gtgacgaagt cagtggtgat cccagatact tcaattcaaa cttgatcgcc
       61 aatccgttta caacctggta gacgccccca aaccactcac tagcggctca aaagttggtt
      121 caggttgtaa aacttgtcac cagtgtatga aactgatcgg taaaggcctc gagccatggc
      181 cgacccggcg atgttgcaac aactttgaaa tgaggacgca gtgccgttaa gaattatccc
      241 tgacgtagtt aatgaaaata cctctctggt ctgcaatcag aacacaacta tgggcgccgc
      301 cgcatcattg atgctggcgc agggcaaagg agcggtggtg atttccgacc atgatgtcct
      361 ggctggtatc tttacagaac gtgatgtgtc cctccgtgtt gtcgccggag gacttgatac
      421 tcaaacggcg attctccgtc aggttatgac ggcagaccca acgaaagttg gtccaaccaa
      481 gtctgcggcg atgtcttgga catagtgcgg accggtggct tccggcattt acccgttatt
      541 gatcaagatc aactaatcgg tgttatttcc atccgtgata tctacgctgc cgtcatgcaa
      601 gatttagagg gcaacttcgg caaggcgatg aaggagcggg caaaagccat gttgtcggct
      661 tcataaaagc cgacttgatt tattcttaac ttgaaatttc ttggtcggct ttttttgacc
      721 ggtaactccg ataaatcggc cacaagaaca gcaatccggc aatggccaac atggttgccg
      781 ccaagggctg ggtcaggaat actgtcggtc cttccatcat gactgcgcgg cggaaatttt
      841 cttccaataa gctgcctaac acgatgccca aaacgatcgg tgctacagga tagtcatatc
      901 gcttaaaaat ccagccaatc acaccaaagg caaaacaagc gccaacgtca aagaatgaat
      961 tctgtacggc aaaactgccg attaaggcga ttgtcaagat cattggatag agcacacttg
     1021 ccgggacttc gaccactttg gcaaaatacc gaacaccgaa aatacctaaa aacagcataa
     1081 ctgcgttggc gattatcaga ctggcgaata taccgtaaac gatttctggg ttggactcga
     1141 acagcaacgg tcccggtgtg atatcatgca actgcagtgc acctattaat acggcatcgg
     1201 tggcactacc tggaataccc aaagccagca acgggatcaa agcacccccc accgaactac
     1261 tattggcagc ttcggaagca gcgacaccgt cgatggctcc cttgccaaag gtttccggtt
     1321 ccttgctcga ccgttgggcg atgttgtagc tgatgaaaga ggcgatggta gcgccagcgc
     1381 caggaaagat accgataatg gtgccgagaa cagatgatcg tacgatggta tatttggttt
     1441 tccaacactc caagacgttg gggaattttc cggatacttt atcgagggta gtggatccga
     1501 actggccttt ctcaaaggcg gtgaaaacga cacttagagc aaatagacca atcaacgccg
     1561 gaatcaggct aaatccgtca tacaattgat caatgccaaa cgagtaacgc gaaacacctg
     1621 aaataggatc gagtccgacg gtattgatga tcaagccgaa cagcacggcg accatggctt
     1681 ttgaaacgtt accgccaccc aatgaaccga ccgtcgttag gccaaaaatc gccaatgcga
     1741 aatagtccgc cggatggaaa ctgatcgcta attttgccaa cggtacggcg aaaacgatga
     1801 ggataataac accaaaaata ccgccaatcg tcgatgcgat caaagacatg ccaaggcctt
     1861 tgccggcttc gccctttaag gtcatcggat agccgtcgat agcggtagcc gctgccgctg
     1921 gcgtgcctgg cgtatttatc agcaccgccg taat
//
LOCUS       DASCNL010000318         2253 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000693422, whole genome shotgun sequence.
ACCESSION   DASCNL010000318 DASCNL010000000
VERSION     DASCNL010000318.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000693422"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1358)
                     /locus_tag="QF359_04320"
     CDS             complement(<1..1358)
                     /locus_tag="QF359_04320"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86166.1"
                     /translation="MTTMTSALLRTNRLFGDRPAVIDTEMNLTWSEHTGRIQKLAGAL
                     SNLGIQKGDRFGIIGPNSFRYTELMYAGFWAGAIAVPINHRLAAPEILHILEDAKCKL
                     LALGDDYLSLTDDEQLAPWRDKRIAIGATSPDKDVPAMDDLLNAANPAEPQDPDENDL
                     ALMLYTGGTTGRSKGVLLTHRNIFSNGWQVINAMDIVKEDIYLHVAPMFHAADLLATG
                     FTINGCAHSYVPVFTPTGVLQAIQDYKVTQAMMAPTMIIMILEDPTFDDYDISTYRNL
                     FYGSSPMAAEWVEKSIQRFTNAEVQQGYGLTETSPIVTTLDADVHRNAVESGDTSILR
                     AAGRPVIGIDLKILDDDGNEVPTGEAGEVCVRGPNVTPGYLKRPEENEKAFKNGWFHT
                     GDVGRVDENGFMFLMDRKKDMIVSGGENIYTSEVEAALYKHPDVFECAVIGIPDDKYG
                     EA"
     gene            complement(1453..>2253)
                     /locus_tag="QF359_04325"
     CDS             complement(1453..>2253)
                     /locus_tag="QF359_04325"
                     /inference="COORDINATES: protein motif:HMM:NF015722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HJO86167.1"
                     /translation="TFLLGSTPDDPFLFDNEKWGHDVTVYPFQMANAPVTNEDFAAFV
                     ADDGYQRRDLWHDIGWGWRQRAKAEHPVYWIADGKDSWQMRHFDQNVDLPLHQPLIHV
                     NWYEASAYCKWASRRLPTEIEWEVAATTEPVNGGKEFSKTKRRYPWGDAGGSNAATLS
                     RANLDGRGLGCVDVAAFAEGDSAWGIRQMLGNVWEWTNSNFEPYPGFKVDAYKEYSEP
                     VFGTRKVLRGGAWATRSRMVNSKYRNFFTPERRDIYSGFRTCAPHNWP"
BASE COUNT          550 a          583 c          567 g          553 t
ORIGIN      
        1 aatgcttcgc catatttgtc atccggtata ccaatcaccg cacattcgaa cacgtccgga
       61 tgtttataaa gcgctgcctc aacttcagag gtgtagatat tttcgccgcc actgacaatc
      121 atgtctttct tgcgatccat caggaacata aagccatttt catcgacccg accaacatcg
      181 ccggtgtgga accagccgtt tttaaacgct ttttcatttt cttccggccg tttgagatag
      241 cccggtgtga cattcggacc gcggacacag acctcgccgg cttctccagt tggtacttca
      301 ttaccgtcat catcaagaat tttaagatcg atgccaatga ccgggcggcc agcggctctt
      361 agaatactgg tgtcgccact ctcaacggcg ttgcggtgaa catcggcatc taaggtggtt
      421 acaataggcg aggtttcggt caggccataa ccttgctgga cttcggcatt ggtgaagcgc
      481 tggattgatt tttcgaccca ttcagcagcc attggcgagg agccataaaa caaattgcga
      541 taggtggaga tatcgtaatc atcaaaggtc ggatcttcca aaatcataat gatcatggtc
      601 ggtgccatca tggcttgggt aactttataa tcctgaatgg cttgcagcac accggtgggg
      661 gtgaaaaccg gcacatagga atgggcgcag ccgttgatgg tgaagccggt ggcgagcaaa
      721 tcagcggcgt gaaacatcgg cgcgacatgg agataaatat cctctttgac gatatccatc
      781 gcattgatga cttgccagcc attggaaaaa atattgcggt gagtgagcag gacgccttta
      841 ctacgccctg tcgtaccgcc ggtatagagc ataagagcca gatcattttc atctgggtct
      901 tgcggctcag ccgggttagc cgcgttgagc aaatcgtcca tagccggcac atctttatct
      961 ggcgaggtcg caccaatggc tattctttta tcccgccaag gtgccagctg ttcatcgtcg
     1021 gtgaggctca gatagtcatc accgagtgcc agcagcttgc acttcgcatc ttcgagaata
     1081 tgaagaattt ccggcgctgc gagacgatgg ttgatcggta cggcaatggc gccagcccaa
     1141 aagccggcat acatcaactc cgtataacgg aaagaatttg gtccaataat gccgaaacgg
     1201 tcacctttct ggatgcctag attggaaagt gcgccagcta gtttttggat gcgtccagta
     1261 tgttcgctcc aagtgagatt catttcagta tcaatcacag ctggccggtc accgaatagt
     1321 cggttggtcc gcagcaatgc tgaggtcatg gtagtcatcg gctaaatagc ctccctattt
     1381 taacaaacga attcaagcgt ttccgcgccc ttttgtcgaa attaatttaa tcctttggac
     1441 caaagcctga ttttaaggcc aattatgcgg cgcacaagtc cgaaatccgc tataaatgtc
     1501 gcggcgttcc ggcgtgaaaa aattacggta cttactattg accatgcggc tcctagttgc
     1561 ccaagcaccg ccgcgcaaaa ctttgcgggt accaaagacc ggttcggaat attctttata
     1621 ggcatcgact ttaaaacctg gatagggttc gaaattgctg ttagtccatt cccagacatt
     1681 gccgagcatt tgacgaatac cccaggcact atcgccttcg gcaaatgcgg cgacatcgac
     1741 acagccaaga ccccggccat ctagattagc gcgggagaga gtggcggcat tactcccgcc
     1801 agcatctccc caaggatagc ggcgtttggt tttggaaaat tctttgccgc cattgaccgg
     1861 ttcggtcgtc gctgccactt cccactcgat ctcggtcggc aagcggcggc ttgcccattt
     1921 acagtaggcg ctggcttcat accagttcac atgaataagc ggctggtgca ggggcaggtc
     1981 gacgttttga tcaaagtggc gcatctgcca actgtcttta ccatccgcaa tccaataaac
     2041 cggatgctca gccttggcac gttggcgcca accccagccg atgtcgtgcc atagatcacg
     2101 gcgttgatag ccatcatcgg cgacaaaagc agcgaagtct tcattggtga caggcgcgtt
     2161 ggccatttgg aacggataga cagtaacatc gtggccccat ttctcgttat caaacaaaaa
     2221 aggatcatct ggggtggagc ccagcaaaaa tgt
//
LOCUS       DASCNL010000319         3868 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000696212, whole genome shotgun sequence.
ACCESSION   DASCNL010000319 DASCNL010000000
VERSION     DASCNL010000319.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000696212"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            94..1692
                     /locus_tag="QF359_04330"
     CDS             94..1692
                     /locus_tag="QF359_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HJO86168.1"
                     /translation="MTQNDHSVQVDDTVTPATLNFSDTFNVTVPFLDRNIDEGRGDKV
                     AVLWKNRELTFGNMAENVNCMANALRRQGVKPGERVMLLVKDVPGFYYGFLGAIRIGA
                     IPIPVNYFLRTHDYTYMLSDSEAKVVLASPEVLGEIMPAIESNGQNVAVKIVVEGKQD
                     GWLELDDLIADEDTFAEPENTGPETDCFWLYSSGSTGDPKASVHQHKDMVYTSQYYGI
                     GTIGLTESSVGFSPPKAFFAYGLGNSVSFPLWTGSTIILLEDRPTPENTLEIMNEMKP
                     THYYGVPTLYAAQLQLLENGFEVDLSSIEFCASGGEALPPALYERWLEHTGLEIIDSI
                     GSSEVLHFYTSNKPGEVKLGTAGPIVPGYEGRIVDPDGNDLPDGEVGELAIKGESTAA
                     YYWNKPEKTAKAMRDGWFYTGDTCYRDEDGCYVFCGRDSDMLKVGGIWVSPVEIESAL
                     TEHSAVLEAAVTGAPDDEQLIKPKAFVVLKQADNAGPELEHELREFIRNRLAPFKYPR
                     WIEFLDELPKTSSGKIQRFRLRSL"
     gene            complement(1719..2525)
                     /locus_tag="QF359_04335"
     CDS             complement(1719..2525)
                     /locus_tag="QF359_04335"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJO86169.1"
                     /translation="MTDYAEQRGNLLKDLDGLKCEKDTKARIGYVILDRPPVNAISET
                     GRKQIAALLAELDNDPEVRVIVVRGANGAYCAGGDMHGFLKFPRDKMSNLAHDMGTPE
                     RCRKPVIAALEKFAMGAGFEMALACDVRIATENTQIALPEITLGIIPGSGGTQRLARI
                     AGLGRAKDMLMRGRSISAQEAKEWGVIAEVVPDGGLDDAIAQWADDLGSLASYPMTTL
                     KRVLNQTYETPISTGFHLEGQAFEKLRPGPEFKLGIESYFAKTKPDYSDM"
     gene            complement(2889..3662)
                     /locus_tag="QF359_04340"
     CDS             complement(2889..3662)
                     /locus_tag="QF359_04340"
                     /inference="COORDINATES: protein motif:HMM:NF019322.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HJO86170.1"
                     /translation="MNGAEQSHSSKSSSRYVQLSDTLKKEIAGGQYPVGSRLPTEHQL
                     CKKYNISRHTVREALRRLKELGLVSRRQGSGTVVESVEPTATYVQSIQSLEDIVQHAQ
                     EAKLSVITTETVEADQWLSQQLGCQWGDRWLRVEGVRRVAGQQEPISWTEIYIHDDFS
                     GVKQYIKNAPRAISALIQEHYDEPITEVKQKISAVTAPDHITKMLKVLPGAPALSIIR
                     QYRNNAGEVILLSLSMHPGERYMYSMSINKVKNSFTIGD"
     gene            complement(3659..>3868)
                     /locus_tag="QF359_04345"
     CDS             complement(3659..>3868)
                     /locus_tag="QF359_04345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJO86171.1"
                     /translation="PFVKDHGRIVDVPHDTEGAVRLLASPIRCSDEDIKYRAAPKLGA
                     DADDILHAAGYNESRIKKLRKAKVI"
BASE COUNT          896 a         1052 c          989 g          931 t
ORIGIN      
        1 ttacaatatt gatccaaaca aatttcaaaa ctattgacgc cgctgccagg taatttgcag
       61 cacataccgg tcttaaaaag aggatgccga ccaatgacac aaaatgatca cagtgttcaa
      121 gtggatgaca ccgtaacacc ggcaacattg aatttctctg acacatttaa tgtcaccgtc
      181 ccgtttctag accggaatat cgacgaagga cgaggcgaca aggtggcggt gctctggaag
      241 aaccgggaac ttacgttcgg aaatatggcg gaaaatgtca actgcatggc caacgctcta
      301 cgccgtcaag gcgtaaaacc cggtgagcgc gtcatgctat tggtcaaaga tgtgcccgga
      361 ttctattatg gttttttagg ggccatacgc atcggggcca tcccgatccc cgtcaattat
      421 tttctccgta ctcacgatta cacctacatg ctctccgact cggaggccaa ggtggtgctg
      481 gcgtctcccg aggttctggg agagatcatg cccgccattg aaagcaatgg acaaaacgtc
      541 gcggtcaaaa tcgtcgttga aggaaagcaa gacggctggc tggaactcga cgatcttatc
      601 gccgatgagg acaccttcgc cgaacccgaa aataccggac cggaaaccga ctgcttttgg
      661 ctctattcat cgggttcgac gggtgatccc aaggcttctg tgcatcagca caaggatatg
      721 gtttacacct cgcaatatta cggcatcggc accatcggcc tgacggaatc cagtgtcggt
      781 ttctcgccgc ccaaggcgtt cttcgcatat ggtcttggca acagcgtgag ttttcccctg
      841 tggaccggtt cgacgattat tctcctggag gaccgcccca caccggagaa tacgcttgag
      901 atcatgaacg aaatgaagcc gacccattat tacggcgtgc caaccttgta cgcggcgcaa
      961 ctgcagctat tggagaacgg ctttgaagtc gatctctcca gcatcgaatt ctgcgcctcg
     1021 ggcggcgagg ccctgccgcc ggctctatat gaacgctggc tcgaacatac gggtcttgag
     1081 attatcgaca gtatcggatc gagcgaggta ttgcatttct acaccagcaa caaaccgggc
     1141 gaggtgaagc tggggacagc cggtcccatc gtgccgggtt atgaaggacg catcgtcgat
     1201 ccggacggca acgaccttcc cgacggagaa gtcggcgaat tggcgatcaa gggtgaaagc
     1261 accgccgcct actattggaa caagccggaa aagacagcca aggccatgcg tgacggctgg
     1321 ttctacaccg gcgacacctg ttaccgcgat gaagacggct gctatgtttt ctgcggacgc
     1381 gacagcgata tgcttaaagt cggcggcatc tgggtgtcac cggtcgagat cgagtccgcg
     1441 ctgacggagc atagcgcggt tttggaagct gccgtgaccg gtgcacctga tgacgagcag
     1501 ctgataaagc cgaaagcgtt tgtggttctg aaacaagcgg ataacgccgg cccagaactg
     1561 gagcacgaac tgagagaatt tatccgcaac cgcttggcgc ctttcaagta cccccgttgg
     1621 atcgagttcc tggacgaact gcccaaaacg tcatccggga aaatccaacg tttccggttg
     1681 cggtctcttt agtcccgtac aaatcgcgtg gacctaaatt acatgtctga atagtcgggt
     1741 ttggttttgg cgaagtaact ttcaataccc aatttaaatt caggacccgg acggagcttt
     1801 tcgaaagcct ggccctctag gtggaatccc gtgctgatcg gcgtctcgta ggtctggttg
     1861 agcacgcgtt tgagcgtcgt catagggtag gaggccaacg accccagatc atccgcccac
     1921 tgggcaatgg catcgtcaag tccgccatcg ggaacgactt ccgcaatgac gccccactct
     1981 ttcgcttcct gggcgctgat ggaacggcca cgcatcagca tgtcctttgc tcttcccaga
     2041 ccggcgatcc tggccagacg ctgggtgccg ccacttcccg gaatgatgcc tagggtaatt
     2101 tccggcagag caatttgcgt gttttcggtc gcaattcgaa cgtcgcaggc caaagccatt
     2161 tcaaagcccg cccccatggc gaatttttcc agggctgcga tcaccggctt ccggcagcgc
     2221 tccggcgtac ccatgtcatg ggccagattg gacattttat cgcgggggaa tttcaaaaac
     2281 ccgtgcatgt cgccaccggc gcaataggcg ccgttggcgc cccgcacgac gatcaccctc
     2341 acctccggat cgttatccaa ttcagcgagc aaagcggcaa tctgcttccg ccccgtttcc
     2401 gaaattgcat tgacgggagg acggtcgagg atgacgtacc ctattctcgc tttggtgtct
     2461 ttttcgcact tcaatccgtc caaatctttc aacaggttgc cccgttgctc ggcataatcc
     2521 gtcatagcgt cgtctccgtc ttctattaca tatttgtctt taataaagtc tcagtcagca
     2581 ttcctattta ccggctaatc ttagccttac aaggaaatcc tggcaacaat aaaatgtccg
     2641 tacatttcta aattcagcga gcctttaatt aagaatcacc accaaagaaa taattgatat
     2701 ccattatata attccccaaa atacaacgtt tattggcaaa attaaaattg catcggcact
     2761 tcgggtactg tggggaaatt tttcgggatt tgattaataa ttgtatggac atttcaaaaa
     2821 attcgatatc aacctggaac cgcgggaaat ccactcctca cggaatccaa acctgggaac
     2881 ggtgaagatt agtccccgat ggtgaaggag tttttcacct tgttgatgct cattgaatac
     2941 atatagcgct cacccggatg catgctcaaa gacagcagta taacttcgcc cgcattattg
     3001 cggtattgcc ggatgattga caaagccggt gcaccgggaa ggactttcaa cattttcgta
     3061 atgtgatccg gcgctgtgac ggcgctgatc ttttgtttta cttcggtgat cggttcgtcg
     3121 taatgttctt ggatcagggc gctgatggca cgcggcgcgt tcttgatgta ctgctttacg
     3181 ccactgaaat catcgtggat gtaaatttcg gtccaggata tcggttcctg ctgacccgcg
     3241 acccggcgca cgccttcgac gcgtagccag cggtcccccc attggcagcc cagttgctgg
     3301 ctcaaccatt gatcggcctc aaccgtctcg gttgtaatca ccgaaagctt ggcctcttgc
     3361 gcatgctgca cgatatcttc aagcgactgg atcgattgca cataggtcgc cgtcggttcc
     3421 accgattcga cgaccgtgcc ggatccctgc cgccgggaaa ccaggccaag ctctttaagc
     3481 cgccgcaagg cctcgcgcac cgtatgacgg ctgatattat attttttaca gagctggtgt
     3541 tcggtgggca gacgactgcc gaccgggtat tgcccgccgg cgatttcttt tttcaaggta
     3601 tctgagagct gaacgtagcg gctactcgat ttactggaat gagattgctc ggcgccattc
     3661 atattacttt agcctttcga agtttcttga ttcggctttc attatatcct gccgcatgca
     3721 gaatgtcgtc cgcatccgcc cccaatttcg gcgccgcccg atatttaatg tcttcgtccg
     3781 agcatcttat tggtgaggcg agcaatctta cagcaccttc tgtatcatga ggcacatcga
     3841 cgatccgccc gtgatcttta acaaaggg
//
LOCUS       DASCNL010000320         1309 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000698660, whole genome shotgun sequence.
ACCESSION   DASCNL010000320 DASCNL010000000
VERSION     DASCNL010000320.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000698660"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1278
                     /locus_tag="QF359_04350"
     CDS             <1..1278
                     /locus_tag="QF359_04350"
                     /inference="COORDINATES: protein motif:HMM:NF012975.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HJO86172.1"
                     /translation="DQVVPMLPEALSNGWCSLKPNEDRPCLAVHLWLDKNGRALQHQF
                     VRGLMHSHARLTYNQVQAAIDGNPDKFTAPLINSVLKPLYGAYEAFCRERFDREPLDL
                     ELPEKKIMLDKKGNVQEVRTRQRHDSHKLIEEFMIAANVAAATALEESKQPCLYRIHE
                     EPPAKNLESYRNFLKSIGFKLAKGQVLMPRHFNQILQKASDGDYFDAISQMTLRSQSQ
                     ATYTGKNVGHFGLALRRYCHFTSPIRRYADLMVHRALIAGLTLGDGALEEKPIDLEEL
                     GEHLSITERRAAVAERDVVDRFSTTYLAKKIGKTFSGTINGVTKFGLFVTLDDTAADG
                     LVPIRSLTDDYYKFDEKRVALKASRAKKVFHLGMKIEVVLKEANPVSGSLVLEIADQS
                     HSNSQSNSNSRPKKVKKQRHSSGQKRQRRIRKR"
BASE COUNT          382 a          332 c          296 g          299 t
ORIGIN      
        1 gatcaggtcg taccaatgct gccggaagca ctatccaacg gctggtgctc cttaaaaccc
       61 aacgaagaca ggccctgtct cgccgtccat ttgtggcttg ataagaatgg ccgggcactg
      121 cagcaccaat ttgtccgtgg cctcatgcat tcacatgcga gactgaccta taatcaagta
      181 caagctgcga tagacggcaa tcctgacaaa tttactgcac ctttgattaa tagcgtccta
      241 aaaccgctct atggtgctta tgaggcattc tgccgggaac gctttgatcg cgaaccgctt
      301 gatcttgagc tgcctgaaaa aaaaatcatg ctggataaaa aaggcaatgt tcaagaagtg
      361 cgcacccggc agcgccacga cagccacaaa ttgattgaag agttcatgat cgccgccaat
      421 gtcgccgccg ctacggcact tgaagagagc aaacagccgt gcctctatcg catccatgag
      481 gagccaccgg cgaaaaacct tgaaagctac cggaattttc taaaatctat cggcttcaag
      541 ctggccaaag gtcaggtttt aatgcccagg cactttaatc aaattctcca aaaagccagt
      601 gacggagact attttgatgc gatcagccaa atgaccttgc gatcacaatc tcaagccacc
      661 tacaccggta aaaatgtcgg acattttggc cttgctctta gacgctattg tcatttcacc
      721 tcacccattc gccgctatgc cgatttgatg gtgcatcgcg cgctgattgc aggcttgact
      781 ctgggtgatg gtgcgcttga agaaaaaccg attgatctcg aagaactggg tgaacattta
      841 agcataacag agcgccgggc ggcagttgct gaacgcgatg ttgttgaccg cttctctacc
      901 acctatctgg ctaaaaaaat aggtaaaacc ttcagcggca caataaatgg cgtcaccaaa
      961 ttcggtcttt tcgttacttt ggacgatacc gcagccgatg gcttagtgcc gataagatcg
     1021 ctcactgacg actactacaa atttgatgaa aaacgcgtgg cactcaaagc ctcacgcgca
     1081 aaaaaagtgt ttcatctcgg catgaagatt gaagttgtgt tgaaagaagc taatccggtt
     1141 tcaggctcat tagtcctgga aattgctgac caaagtcatt caaatagcca atctaatagc
     1201 aattcccgtc ctaaaaaagt caaaaagcaa cgccatagtt caggacagaa acgccagcgc
     1261 cgcataagaa agagatgacg gcgtccaaaa aattaacgac aatagcgcc
//
LOCUS       DASCNL010000321         1381 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000699684, whole genome shotgun sequence.
ACCESSION   DASCNL010000321 DASCNL010000000
VERSION     DASCNL010000321.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1381)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1381)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000699684"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(51..>1381)
                     /locus_tag="QF359_04355"
     CDS             complement(51..>1381)
                     /locus_tag="QF359_04355"
                     /inference="COORDINATES: protein motif:HMM:NF020130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HJO86173.1"
                     /translation="DEDVITMAAEAALNAVTHADIDSTCDLETLYFGTSSALDFEHSS
                     LGVIGEVLRASDEIDYAEFTASPRASFAALKACQDAAASGRITNGLVIGAEQRATAAG
                     SQEEMNCGDGAVAIMLGTNNVIAEIDEVYSYTTNFVDRWRDADSDFVKEYEPRFTRDY
                     GYKQHIIAAASGLFAKLQCGIDDFDHVVLQQPNASMVSGVAKALNANQDQLAHGGLIN
                     EVGDLGAASALMGLAGVLDKAEPGERILVLSYGSGASDAIALSVTDAIAAKRDKLKPV
                     SLYLKSSLQVEDYVAFAKMTGALEKQNTPTQIGVPPTSSALWRDGREIRQLAAIKCKS
                     CHYVNYPATIRKICVRCGGTEFDPITLARTGKVHTYCLSLYVPPPLVGPQALIIGDLD
                     DGNRYRALGTEINSSDDVEIDMKVELVMRKIVTQDGVPVYGNVFRPIRIN"
BASE COUNT          329 a          385 c          341 g          326 t
ORIGIN      
        1 ccgaaaggaa tcatgcccgc gccgaccaag gctactctgt tccagcccat ctaattgatc
       61 cttatcggtc taaaaacatt gccgtaaacc ggaacgccat cctgagtgac aatcttgcgc
      121 atcactaatt ccactttcat atcaatttcc acatcgtccg aggaattaat ctccgtcccg
      181 agggcgcgat agcgattgcc gtcatcaagg tcgccgatga ttaaagcctg cgggccgacc
      241 aatggtggcg gtacataaag gctgaggcaa taggtgtgaa ccttccccgt tcgggccagc
      301 gtgattgggt cgaactccgt gccaccacag cggacacaaa ttttgcggat ggttgcggga
      361 taattgacgt agtgacagga tttacacttg attgccgcca attgcctaat ttcccgacca
      421 tctcgccata gggcagagga ggtgggaggt acgccgattt gtgtcggtgt attctgcttt
      481 tccaatgcac ccgtcatctt ggcgaaggca acatagtctt cgacctgcag ggaacttttc
      541 aaatataaag aaaccggttt taacttgtcc cgcttagcgg caatggcgtc ggttacactg
      601 agcgcaatgg catcactggc gcccgatcca tagctgagta ccagaattcg ttcgccgggc
      661 tcggctttgt ctaagacgcc ggccagcccc atcagcgccg aagccgcacc gagatcgcca
      721 acttcattaa tcagaccgcc atgtgccagt tgatcttgat tggcgttcag cgctttggca
      781 acgccgctta ccatactggc attgggttgt tgcaaaacca catggtcgaa atcatcgatt
      841 ccgcattgaa gtttcgcaaa caatccgcta gccgcagcaa taatatgctg cttgtaacca
      901 taatcacggg taaagcgtgg ctcatattct ttgacaaaat cactgtccgc atcccgccag
      961 cggtcaacga aattggtggt gtagctgtag acctcatcga tttcagcaat cacattgttt
     1021 gtgcccagca ttatggccac agccccatca ccgcaattca tttcctcttg gctacctgcc
     1081 gccgtagctc gctgttccgc gccaattacc agaccgttcg taatacgacc cgaagcagcg
     1141 gcatcctggc aagctttaag agcggcaaaa ctggctcgag gtgaggcggt gaattcggca
     1201 tagtcaatct cgtcgctcgc ccgtaaaact tcacctatca cgccaagcga ggaatgctca
     1261 aaatcgaggg ctgagctagt gccgaaatag agagtctcaa gatcacacgt gctgtctata
     1321 tcggcatggg tgacggcatt gagagcggcc tctgccgcca tggtgatgac atcttcgtcc
     1381 g
//
LOCUS       DASCNL010000322         1324 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000702508, whole genome shotgun sequence.
ACCESSION   DASCNL010000322 DASCNL010000000
VERSION     DASCNL010000322.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1324)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1324)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000702508"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /gene="rpsE"
                     /locus_tag="QF359_04360"
     CDS             <1..516
                     /gene="rpsE"
                     /locus_tag="QF359_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HJO86174.1"
                     /translation="KLVGINRVAKVVKGGRRFGFAALVVVGDGRGRVGFGSGKAREVP
                     EAIRKATEAAKRKLIRVPLREGRTLHHDVQSRFGAGKVIIRAAPAGTGIIAGGPMRAV
                     FESLGVQDVVAKSNGSQNPYNMIKATFEALQNLASPRAIAAKRGKKMRDIVGRRDGAQ
                     AVESQAEAETA"
     gene            521..715
                     /gene="rpmD"
                     /locus_tag="QF359_04365"
     CDS             521..715
                     /gene="rpmD"
                     /locus_tag="QF359_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HJO86175.1"
                     /translation="MADKNSTVTVTQIGSPIGRRKDQRQTLIGLGLNKMHRTRTLEDS
                     PAVRGMINKVQHLVRVEDGA"
     gene            727..1176
                     /gene="rplO"
                     /locus_tag="QF359_04370"
                     /pseudo
     CDS             727..1176
                     /gene="rplO"
                     /locus_tag="QF359_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390419.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
BASE COUNT          373 a          284 c          370 g          297 t
ORIGIN      
        1 aaattagttg gcattaaccg tgtcgctaag gttgttaaag gtggtcggcg ctttggtttt
       61 gccgctcttg tcgttgtcgg tgatggccgc ggccgggttg gttttggcag tggtaaagct
      121 cgtgaagtac cggaagcaat tcgcaaagca acggaggccg ctaaacgcaa acttatccgc
      181 gtgccgctgc gtgaaggccg gaccttgcat catgatgtcc aaagccgatt tggcgctggt
      241 aaagtgatta tccgggcggc tcctgccggt actggtatca ttgccggtgg cccaatgcgt
      301 gcggtatttg aatctttggg tgtgcaggac gtggtggcta agtccaatgg ctcgcaaaat
      361 ccttacaaca tgatcaaagc aacttttgag gcgctgcaaa atttggcatc gccccgggcg
      421 attgcggcaa aacgcggtaa aaaaatgaga gatattgtcg gacgccgcga tggtgctcaa
      481 gcagtagaat cacaagctga agcagaaacg gcataagata atggctgata aaaactcgac
      541 tgttacggta actcagatcg gtagcccgat tggccgccgt aaggatcagc gccagacttt
      601 gatcggtttg gggctcaaca aaatgcacag gacccggact ttggaagatt cgccagccgt
      661 tcgcggcatg atcaataagg tccagcattt ggtccgtgtt gaagacggcg cttaaggaat
      721 aagaaaatga gactaaacga aattcgcgat aacgaaggcg cctgcaaatt gcgcactcgt
      781 attggccgtg gcgtaggttc tggcaagggt aaaactggtg gccgtggaat caaaggtcag
      841 aaatcccgct caggcgtgtc tttaattggt tttgaaggcg gtcaaatgcc aatttaccgg
      901 cggacgccaa aacgcggatt caacaatatt tttaccaaga aattcgaaat cgttaatctc
      961 ggccgattgc aaaaagctat cgatgaaaag aaatttgatg ccaaatcgac tgttaatgtc
     1021 aaaaccttag ctgctgccgg cttgatccgt ggcaacaagg acggtgttcg tctgctggct
     1081 aaaggtgagc ttaaagccag cctgaattgt gaagtttccg gggcgtcaaa atcagctatc
     1141 gaagcgattg aaaaagttgg tggtaaggtc atattgccgt taacaacgaa ggtcgatctt
     1201 gaagcccaag aaaaatcgta taaatcacaa gctaagaaag atgctgcaac accggctaaa
     1261 aaagctgccg ccgatgacga tgaagaagaa aaagccgcag agccgaaagc tgaaaaggaa
     1321 gcta
//
LOCUS       DASCNL010000323         1366 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000703857, whole genome shotgun sequence.
ACCESSION   DASCNL010000323 DASCNL010000000
VERSION     DASCNL010000323.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000703857"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(116..583)
                     /locus_tag="QF359_04375"
     CDS             complement(116..583)
                     /locus_tag="QF359_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO86176.1"
                     /translation="MSTKVDITFTVNGAVKQVSVPAHMSALDMLRNQFDLKGAKEACG
                     EGECGACTVIVDEASVCSCLMYAADCDGRTIKTIEGVQTDDGLDPIQQAFVDQGAVQC
                     GYCTPGMVMQAKHVLAKNPNPTEGEIQRGLEGNVCRCTGYRKIFDAVAEAARS"
     gene            complement(573..>1366)
                     /locus_tag="QF359_04380"
     CDS             complement(573..>1366)
                     /locus_tag="QF359_04380"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO86177.1"
                     /translation="LAAGPATIVAGGTDLMLQTGSGQKAYAPTLLNIQKITKMRGVSQ
                     DGNTIRIGALTTITDLLTDPIIAEHLPVLATMADKFASDQIRNAGTVGGNICNASPAG
                     DSLVPLLMYKAEAVLVATNDSRKVPLAEFFTGPGETIRQENELLVGVDIPVPPAGFRG
                     GFGKFGPRPALEIAMASVSVGGVVKDGTISDVRVAFGAVAPTPIRSAETEAALEDKKL
                     NKKTISAAGEIASSSVNPITDVRATDWYRRHLIRVMTEEILNNVN"
BASE COUNT          306 a          379 c          347 g          334 t
ORIGIN      
        1 atcgttgata taggtggttt tgccgacgac tttatccggt gcatccggct tgggaataga
       61 tttgccaata agggtttcag gtttttcgac gatctgatcc atctaatctc tccgattaac
      121 tgcgcgcggc ttcggcgacc gcatcaaata ttttgcggta accggtacaa cggcaaacat
      181 tgccttctaa gcctcgctgg atttccccct ccgttggatt aggattttta gccaatacat
      241 gcttggcctg catcaccatg ccaggtgtgc aatagccgca ttggaccgca ccctgatcga
      301 caaaggcctg ctggatgggg tctagcccgt catcggtttg aacaccttct atggttttaa
      361 tggtgcggcc atcgcaatca gcggcataca tcaagcacga gcaaacggat gcttcatcaa
      421 cgataaccgt gcacgcaccg cattcgcctt caccgcaggc ctctttggcg cctttcaaat
      481 caaactgatt gcgcagcata tcaagcgccg acatatgagc cggcacgctg acctgtttca
      541 ccgcgccatt gacggtaaag gtaatatcaa ctttagttga cattgttcaa aatctcctcg
      601 gtcataacgc ggatcaaatg ccgccggtac caatcagttg cccgaacatc ggtgattggg
      661 ttcacagaac tgctggcgat ctcaccggcc gcgctaatgg tttttttgtt taactttttg
      721 tcttcaagag ccgcttcggt ttcggctgag cggatcggcg ttggcgccac cgcaccaaaa
      781 gcaacccgga cgtctgagat agtgccgtcc ttaaccacac caccgacact gaccgatgcc
      841 atcgcaatct cgagtgccgg gcgtgggcca aatttgccga atccgcctct aaaaccagcg
      901 ggcggcacgg ggatatcaac accgaccagc aattcatttt cctggcgaat ggtttccccg
      961 gggccggtaa aaaattcggc aagtggcact ttgcgggaat cattggtagc caccaatacc
     1021 gcctccgctt tatacatcag aaggggcacc aagctgtcac cggctggaga cgcgttgcag
     1081 atattgccac cgacggttcc agcgttacgg atttgatcac tggcgaactt gtccgccata
     1141 gtcgccaaaa ccggcaaatg ctcggcaata atcgggtcgg tcagcaaatc cgtaatcgtc
     1201 gttagtgcac cgatacgaat ggtattacca tcttgtgaga cgccgcgcat tttagtgatt
     1261 ttctggatgt ttagcagggt tggtgcgtag gctttttggc ccgaaccggt ttgtagcatt
     1321 agatcggtgc cgccggcgac aatcgtcgcc ggacccgccg ctaagg
//
LOCUS       DASCNL010000324         1257 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000704492, whole genome shotgun sequence.
ACCESSION   DASCNL010000324 DASCNL010000000
VERSION     DASCNL010000324.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000704492"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="QF359_04385"
     CDS             complement(<1..187)
                     /locus_tag="QF359_04385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86178.1"
                     /translation="MAQKKIFQPNPEQLKLAPNITGREINGVGEAAHRQPTRIYWHDP
                     DTIEYGKMQLWFYSQNNS"
     gene            complement(199..795)
                     /locus_tag="QF359_04390"
     CDS             complement(199..795)
                     /locus_tag="QF359_04390"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJO86179.1"
                     /translation="MAQVKKTSVRDAILDSATELFTERGYSNTTLADISRKASVTMSN
                     IYNYYDSKLDVLFAIYEPWLDERIDFVAQETEKIKEPKEKMRYLLKYLFSELPADTNC
                     FANNFMQAIVTRKSDENYSRDLLLRSEEKISEIIRNSIPESLKEGLADNILIHFFFMA
                     QDGFVINYALNGPSRRVDAIVDLLCKMIFNSEPVDTPS"
     gene            938..>1257
                     /locus_tag="QF359_04395"
     CDS             938..>1257
                     /locus_tag="QF359_04395"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86180.1"
                     /translation="MAGNEALLTVRNVSKRFYGTQALDDVSFDLAAGEVHTVVGENGA
                     GKSTLIRILGGIHEKDSGEITIEGTPSEFTNPREALNAGIVIIPQEMQLVLDATVAEN
                     VMLG"
BASE COUNT          330 a          263 c          308 g          356 t
ORIGIN      
        1 tgctattgtt ttgcgagtaa aaccacagtt gcattttgcc atactcgata gtgtcaggat
       61 cgtgccaata aattcgggtt ggttgccggt gagcggcttc accgaccccg ttgatttccc
      121 ggccggtgat attgggagct aatttcagtt gttccgggtt cggttgaaaa attttctttt
      181 gcgccatggc tcccgttcct atgacggagt atcgacgggt tccgagttaa aaatcatttt
      241 gcacaacaga tcgacgatcg catcgactcg gcgtgacggg ccgttgagcg cgtaattaat
      301 gacgaaccca tcttgcgcca tgaaaaagaa gtggatcaat atattatcgg caagaccctc
      361 tttaagtgac tctgggatgg aattgcggat aatctcggat attttttcct ctgaccgcaa
      421 cagcaaatcg cgggaataat tctcgtcgga tttccgggtg acgatggctt gcatgaagtt
      481 attagcgaag caattggtat cggctggcag ttcgctgaaa agatatttaa gcagatagcg
      541 catcttttct tttggttctt taattttctc ggtttcctgg gcgacaaaat caattcgttc
      601 gtcgagccaa ggctcataga tggcaaataa aacatcgagt ttggaatcgt agtaattgta
      661 aatatttgac atcgtaaccg aggctttgcg ggaaatatcc gcgagggttg tgtttgaata
      721 acctcgctcg gtaaaaagtt cggttgcgct atctaaaata gcatcgcgca ctgatgtctt
      781 ttttacttgg gccatccggc acctacccat attataattg ttaaagccaa acggaatcta
      841 tcggttgact ttttcattgg taatagagaa tactattctt tattgatcaa ggtctacaat
      901 aaaatataat ggtattaaag atctgggaga gaatgaattg gccggtaacg aggcactact
      961 caccgtacgc aatgtatcca agcgttttta cggcacccag gcgttggatg acgtatcatt
     1021 tgatttagca gcgggagaag ttcatacggt ggtcggcgaa aatggtgccg gtaaatcgac
     1081 cctcattcga attcttgggg gaatccatga aaaagactcc ggtgaaataa ccatcgaagg
     1141 cacgccatcc gaattcacca atccgcgcga agctttaaat gccggtatcg ttattatccc
     1201 ccaggaaatg caattggtgt tggacgcgac ggtcgccgaa aacgttatgc tcggcga
//
LOCUS       DASCNL010000325         1273 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000708764, whole genome shotgun sequence.
ACCESSION   DASCNL010000325 DASCNL010000000
VERSION     DASCNL010000325.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1273)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1273)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1273
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000708764"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="QF359_04400"
     CDS             <1..533
                     /locus_tag="QF359_04400"
                     /inference="COORDINATES: protein motif:HMM:NF014794.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO86181.1"
                     /translation="SCGAGNYTHWVLRFLKHRQFGTQLAPLGAVMGYGVPAAIAASLQ
                     YPDRLAVAFAGDGCFLMNAQDMATAKKYGAQPIIIVINNGIYGSIRMHQERAFPTRNI
                     GTDLENPDFIAYAEAFGVNAFRVTKTAEFEKAFEEAMAKPGPSLIELVVSEEAISPAF
                     TLSELIERSLDSQEEK"
     gene            535..>1273
                     /locus_tag="QF359_04405"
     CDS             535..>1273
                     /locus_tag="QF359_04405"
                     /inference="COORDINATES: protein motif:HMM:NF012382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO86182.1"
                     /translation="MTRDVIDPKLLFRDEVVNLPVYKTGTKFHELTEEQSKQEMLRLG
                     SNENPYGPSPRVFEAIQESLNEVHLYPDSTCNDIAEKLGEKLEIDHGRLVFNSGSEAI
                     LHAMVNACLRPGDKVVSLVPSFPIINIFALAAGASVIGVPHEDDLSFRADKICQAVGG
                     GVRMVYLCMPKNPTGSYFTEPDLERIVATANSETLFVLDEAYVEFAGDKPDYPDAVKI
                     LEAAGQPYIALRTMSKAYALAGMRIGPE"
BASE COUNT          296 a          294 c          358 g          325 t
ORIGIN      
        1 tatcgtgcgg cgctggtaac tatacccatt gggttttgcg attcctaaaa catcgccagt
       61 ttggcactca gctggctcct ttgggtgcgg tgatgggcta tggcgtaccg gcggcgattg
      121 ccgcctcgct gcaatatccg gatcgattgg cggtggcgtt tgccggagat ggttgctttt
      181 tgatgaacgc gcaagatatg gcgacggcta agaagtatgg cgcccagcca attatcattg
      241 ttatcaataa cggtatttat ggctcgatca gaatgcatca ggagcgtgct ttcccaaccc
      301 gcaacattgg caccgatctc gaaaaccctg actttatcgc ctatgccgaa gcctttggcg
      361 tgaatgcttt ccgtgttacc aaaacggctg agttcgaaaa agcgttcgaa gaggcgatgg
      421 ctaaaccggg ccccagcctc attgagctgg tggtttctga agaggctata tccccagcct
      481 ttaccttaag tgaattgatc gagcgttccc tcgattctca ggaggagaaa tgagatgacc
      541 cgcgacgtaa ttgatccgaa gcttctcttt cgcgacgaag tcgtcaacct gccggtatat
      601 aaaacgggca cgaagtttca tgaattgacg gaagagcaat ccaagcagga gatgctgcgt
      661 ctgggcagca atgaaaaccc gtacgggccg agcccacgcg tctttgaagc gatccaagaa
      721 agtttaaacg aggtgcatct ctaccctgat agcacgtgca acgatattgc ggaaaaattg
      781 ggcgaaaagc ttgaaattga ccacggaaga ttggttttta atagcggttc ggaagccatt
      841 ttacatgcga tggtgaatgc ctgccttcgg ccgggcgata aagttgtgag tcttgtgccg
      901 agctttccta tcattaatat ttttgctctc gccgctggcg caagcgttat tggtgtgccg
      961 catgaagatg atctgtcgtt tcgtgccgat aaaatttgtc aggcagtggg ggggggcgtg
     1021 cgcatggtct atttgtgtat gcccaaaaat ccgaccggca gttattttac tgagcctgat
     1081 ttagaaagaa ttgtggctac ggcgaattcc gagacgttgt ttgtattgga tgaagcctat
     1141 gttgaatttg cgggagataa gccggattat cccgatgcgg tcaaaattct ggaggcagcg
     1201 ggccagccct atattgcgct ccgcaccatg tccaaggctt acgcgctggc cggtatgcgg
     1261 attggcccag agg
//
LOCUS       DASCNL010000326         1433 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000709145, whole genome shotgun sequence.
ACCESSION   DASCNL010000326 DASCNL010000000
VERSION     DASCNL010000326.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000709145"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="QF359_04410"
     CDS             complement(<1..469)
                     /locus_tag="QF359_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJO86183.1"
                     /translation="MALQFTLNGEMREVSGVSPTLTVLDYLREQAELTGTKEGCAEGD
                     CGACTIVLAETGDGKPSYKAVNACLLMLPQLDGKHVFTVEGVATSDDLLDPVQDAMVK
                     TDGTQCGFCTPGIIMSLFALRQSEAEVAEGEIHNTLAGNLCRCTGYRPIVEAAR"
     gene            complement(551..>1433)
                     /locus_tag="QF359_04415"
     CDS             complement(551..>1433)
                     /locus_tag="QF359_04415"
                     /inference="COORDINATES: protein motif:HMM:NF017945.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HJO86184.1"
                     /translation="IDKEVMDLTQWQAIGISIGAFIAGWVIYDQLCKSPIGKNVVALS
                     TLVFIMFLLAAYGFTNVYSGRGAFVHVGAMVGTIMVANVFFVIIPNQKVVVADLIAGR
                     EPAAYLGDDAKQRSTHNNYLTLPVLLMMISSHFPMVFSNKHSWLVVALVIIIGGIIRD
                     YYNAKNAGGSGNRLKWQWPAASLFMVILIVFISYREDVKVAEDDQLESNDVLAIVQTR
                     CVSCHAAKTTDEDIEEAPGGVKLETIAEIKKYSAKILKQTVLTNAMPLGNKTKMTKKE
                     RQGIGDWIRRGMLVEED"
BASE COUNT          356 a          394 c          314 g          369 t
ORIGIN      
        1 ctcttgcggc ttcaacaatt ggccggtagc cggtacagcg gcagagattg cctgccagcg
       61 tattgtggat ttcgccttct gcaacctccg cttcactttg acgcagggca aaaagtgaca
      121 tgataatacc gggcgtacaa aacccgcact gggtgccatc ggtcttgacc atagcatcct
      181 gcaccgggtc aagcagatca tcgctcgtgg ccacaccttc gacggtaaaa acatgcttgc
      241 cgtccaattg cggcaacatc aatagacagg cattaaccgc tttatagctc ggttttccgt
      301 caccagtttc agccagcact atggtgcagg caccacaatc accttcggcg cagccttctt
      361 tggtgcctgt caactcggcc tgttcacgca ggtaatccaa cacggtcaag gttggcgaga
      421 ctccagatac ctcgcgcatt tcgccattta atgtgaactg gagtgccatt aaatcccaaa
      481 tccctgccta ttattgcgca ctttttgaca cttaagttaa gtattgcctc ttttgtttaa
      541 cgagtcccat ttaatcttct tcgaccagca taccgcgcct aatccaatca ccaatgccct
      601 gccgctcttt tttggtcatt ttggtcttat tgccgagcgg catcgcattg gtcagcactg
      661 tctgcttgag tattttggcg ctgtattttt taatttctgc aatagtttca agcttcacgc
      721 cgccgggcgc ttcctcaata tcctcatctg tggtcttggc agcatggcag gagacacaac
      781 gggtctgcac aatcgccagc acatcattgg attcaagctg gtcatcctca gccactttaa
      841 cgtcttcacg gtaactaata aatacgatca gaattaccat gaacagggat gctgcaggcc
      901 attgccattt taaccggtta ccactgccac cagcattttt cgcattgtag taatcgcgga
      961 tgatgccgcc gataatgatc accagcgcca ccaccagcca agaatgcttg tttgagaaaa
     1021 ccatcggaaa gtgtgagctg atcatcatca acaataccgg caaggtcaga taattgttat
     1081 gggtcgagcg ctgtttagca tcgtcgccca aataggcggc cggttcccgg cccgcaatca
     1141 ggtcggcgac aacaactttt tgattgggaa tgatgacgaa aaatacgttt gccaccatga
     1201 tcgtaccgac cattgcgcca acatgaacaa aggccccacg tccgctatag acattggtaa
     1261 agccataagc cgccagcaag aacatgatga atacaagtgt gcttagcgca acgacatttt
     1321 tacctatagg tgatttgcaa agctgatcat agatcaccca accagcgata aaggctccga
     1381 tactaatccc gatcgcctgc cattgagtga ggtccattac ttctttgtcg atc
//
LOCUS       DASCNL010000327         1205 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000710234, whole genome shotgun sequence.
ACCESSION   DASCNL010000327 DASCNL010000000
VERSION     DASCNL010000327.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1205)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1205)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000710234"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            183..1160
                     /locus_tag="QF359_04420"
     CDS             183..1160
                     /locus_tag="QF359_04420"
                     /inference="COORDINATES: protein motif:HMM:NF013257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HJO86185.1"
                     /translation="MSLPALFGIRDRSPEAELAILTNAPVMGRAAQLETMLGRTNLIS
                     EYFSLPPGGGGLSSMRQVRSAIKVWSPDKLIYLSEPSSLISLMKEFLFFKSCGIKNVK
                     AMPFARSVREYQHKSDKLWESESERLLRVTGSPWSEKFEITFSGEEQNQAEQIIAEKF
                     TGVSYIAFSIGGKLPDKDWGDINWSRVLESLSKENPSLGLLLIGADDESVRSSALALK
                     WQGPVLNLCGKTNPRLSALAMRRALFYLGHDSGPMHLAALISVPCVALFSARAKPGVW
                     FPHGDNHHIFYPWEMADRVSNKAGFRTAGSSILSIKHEDVIEACRKLLT"
BASE COUNT          331 a          256 c          279 g          339 t
ORIGIN      
        1 attgcgccca ataatctctc atcgttttcc cacaccttgg gatttagtaa tttgccgtga
       61 taataacgcc atgctaccaa ttagtaaatt tgatatataa tagattccct ccatcaccta
      121 acatagactt tatggttcaa agaatactaa tttttcggcg cggtagtatc ggtgatgcgg
      181 tggtgtccct gccggcacta tttggcattc gtgatcgctc gcccgaagca gaactcgcta
      241 ttttaaccaa cgcgccggta atgggccgtg ctgctcaatt agaaacgatg ttaggacgta
      301 ctaacctaat atcggaatat ttttccctgc ccccgggcgg tggtggctta tcttcaatgc
      361 gccaagttag gtctgccatt aaggtatggt caccagacaa attaatttat ttgtcagaac
      421 cgtcgtcgct aatttcactg atgaaagaat ttttgttttt taagtcctgc ggcataaaaa
      481 atgttaaggc catgcctttt gctcgttcag ttcgcgaata ccagcacaaa tcagacaagc
      541 tttgggaatc agaaagcgag cggctattgc gcgtcactgg atcaccgtgg tcagaaaagt
      601 ttgagatcac ttttagtgga gaagaacaaa atcaagctga acagattatt gctgaaaaat
      661 tcaccggcgt atcttatatt gccttcagta tcggtggtaa acttccggac aaggattggg
      721 gcgacataaa ctggagccgc gttttagaaa gtttatctaa ggaaaatcct tccctgggcc
      781 ttttacttat cggtgcggac gatgaaagcg tacgtagttc tgcgctcgct ctaaaatggc
      841 agggaccagt attaaattta tgcggcaaga caaatccgcg cctcagtgct ttagcaatga
      901 ggcgggcgct gttttatctg ggtcatgaca gcggcccgat gcatttagct gccttgatat
      961 cggttccgtg cgtggcactt tttagtgcac gagcaaaacc aggtgtgtgg tttccacatg
     1021 gtgataatca tcatatattt tatccctggg aaatggcgga tagagtaagc aataaggcag
     1081 gatttcggac cgcaggttcg tccatcctgt caatcaaaca tgaagatgtg atcgaagcct
     1141 gtcgaaaatt actgacttaa attagagaaa agtctaataa attgatccta agagacggta
     1201 aaaca
//
LOCUS       DASCNL010000328         1909 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000710562, whole genome shotgun sequence.
ACCESSION   DASCNL010000328 DASCNL010000000
VERSION     DASCNL010000328.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000710562"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            4..513
                     /gene="rpsF"
                     /locus_tag="QF359_04425"
     CDS             4..513
                     /gene="rpsF"
                     /locus_tag="QF359_04425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HJO86186.1"
                     /translation="MSLYESVFIARQEISAQQVEALADAYESVIKDNGGSVEKRENWG
                     LRSLAYKIKKNRKGHYVLFNIDAPVNALHEMERQMRLNEDVLRYLTLRVGEIEEGPSI
                     PAQVQARAGRDDRPARSYKDTRDRDEKPDKAQAKTEETAKVSDEPVEEAEAETEVEAE
                     AEPKAEGEE"
     gene            513..803
                     /gene="rpsR"
                     /locus_tag="QF359_04430"
     CDS             513..803
                     /gene="rpsR"
                     /locus_tag="QF359_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HJO86187.1"
                     /translation="MADFDNDRSSENRPRGGGGGGGGRRPFFRRRKTCPFSGSNAPKI
                     DYKDTKLLSRYISERGKIVPSRITAVSAKKQRELARAIKRARFLALLPYVSQ"
     gene            924..1874
                     /locus_tag="QF359_04435"
     CDS             924..1874
                     /locus_tag="QF359_04435"
                     /inference="COORDINATES: protein motif:HMM:NF021506.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HJO86188.1"
                     /translation="MYRETTVAIGAGLASALLSVSIAFGSGLGLLLVYFALLPILLIG
                     LSQGQRSVSIAAVAGLFSTIFFTNIFQGAIYGVSVALPAWLIVQYGLNSQTTRDGSTI
                     WFPIGEILARLAALGGIALVLGAITYFDATGGFVKVIEEFLDKILAARLQFGSPTQRH
                     QLVERLVPLFPAISAASWILMVSINGILAQSILIRAGRNLRPAVHYSSISAPEWLYWG
                     LVGAGALALLGSGSFEYVGHNLAIVLGIPFFFFGLGVIHTLARLLRSPSIALTAFYFL
                     MVISRWAIFVVAIIGFFEEWNDLRHRFGAPATKEEDDEEE"
BASE COUNT          472 a          455 c          472 g          510 t
ORIGIN      
        1 aatatgtctt tgtatgaaag cgtgtttatc gcacgccaag aaatctctgc tcaacaagta
       61 gaagctcttg ccgacgctta tgaaagtgtc atcaaagata acggtggcag cgttgaaaag
      121 cgcgaaaact gggggctcag atctcttgcc tataaaatta aaaaaaaccg caaaggccat
      181 tacgtgcttt tcaatatcga tgcgccagtc aatgcattac atgaaatgga acgccaaatg
      241 cgattaaacg aagacgtgct gcgttacttg acattgcgcg ttggtgagat cgaagaaggc
      301 ccttcaattc cggcccaggt tcaagctcgc gctggtcgtg atgatcgtcc cgcccggagc
      361 tataaagata cacgggatcg cgatgaaaaa cctgataaag cgcaagctaa aaccgaagaa
      421 actgccaaag taagtgatga gccagttgag gaagcagaag cagaaactga agtagaagcg
      481 gaagccgaac ctaaagctga gggagaagaa taatggctga ttttgataat gatagatcct
      541 cagaaaatcg cccacgcggc ggtggcggag gcggtggtgg acgccggcca ttctttcggc
      601 gccgtaaaac ctgccctttc tccgggtcta acgcaccgaa aattgattac aaagacacca
      661 aactgctgtc ccgttatatt tcggaacgcg gtaaaattgt cccaagtcgt attacggccg
      721 tttcggccaa gaaacaacgc gaacttgctc gagcaatcaa gcgtgctcgt ttcttagcgc
      781 tcttgccata cgtttctcaa tagaaacgca aatacagtta aaagtgtgat agcagctgtt
      841 cggattcacc ttttataatt cggatcgctc acctgctttc agttgaccgg ctgtgggata
      901 ggaaaaagcg ggatgtatcc ataatgtatc gggagactac cgtcgcgata ggtgcaggcc
      961 tcgccagtgc tctgctctcc gtctccattg cctttggctc cggcctcggc ctgctgctgg
     1021 tctatttcgc cctgttgccg attttgctta ttggcctcag tcaaggtcaa cgcagtgttt
     1081 caatcgccgc tgttgccggt ctttttagca caatattttt caccaatatt ttccaaggcg
     1141 cgatatacgg cgtttcagtt gccctgccag cctggttgat cgtgcaatat ggcttgaata
     1201 gtcaaaccac gcgagacggt tcgacaatat ggtttccaat cggcgaaatt cttgcccggc
     1261 tggcagccct cggtggtatc gccttggtgc tcggcgccat cacttatttt gatgcaaccg
     1321 gtggatttgt taaggttata gaagaatttc tcgataaaat tcttgccgcc cgattgcaat
     1381 ttggctcacc gacccaacgc caccaattgg tcgaacgtct ggtgccttta tttccagcca
     1441 tctccgcggc ttcatggatt ttaatggtct cgatcaatgg cattctcgcg caatccattc
     1501 tcatcagagc aggccgaaat ctccgaccgg ctgtacacta ttcttcgata agcgcgccgg
     1561 aatggcttta ttggggattg gtaggcgccg gagccttggc tctattgggg tctggcagtt
     1621 ttgaatatgt cggtcacaat ctggcaattg tgttaggcat accgtttttc ttttttgggc
     1681 tcggcgtcat tcatactctg gccagattat tgcgctcgcc cagcattgcc ctcaccgctt
     1741 tttatttttt gatggtgatt tcgagatggg cgatttttgt cgttgcaatc attggctttt
     1801 tcgaagaatg gaacgattta cgccatcgtt tcggcgctcc tgctactaaa gaagaagacg
     1861 atgaagagga ataaccgcaa aaaatttagg gtattcacta gttgaatag
//
LOCUS       DASCNL010000329         2018 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000715593, whole genome shotgun sequence.
ACCESSION   DASCNL010000329 DASCNL010000000
VERSION     DASCNL010000329.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000715593"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1048)
                     /gene="nuoG"
                     /locus_tag="QF359_04440"
     CDS             complement(<1..1048)
                     /gene="nuoG"
                     /locus_tag="QF359_04440"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HJO86189.1"
                     /translation="MPKLTIDGVEIEVDAGLTVLQACEIAGREIPRFCYHERLSVAGN
                     CRMCLVEMERAPKLIASCAMPVDDGMIIITDSETIRQARKGVMEFLLINHPLDCPICD
                     QGGECDLQDQSIGFGYDRSRYSEEKRTVKNKNFGPLVSTVMTRCIHCTRCIRFATEIA
                     GVPELGATGRGEHTEVGTYVEKTLSSELSGNIIDLCPVGALTSKPYAFNARPWELKKT
                     ESIDVMDALGANIRIDTRGAEVLRIVPRNNDDVNEEWISDKSRFACDGLRRQRLDQPY
                     IRQDGKLQAASWDEAFAVVAAKVKATSGSKIAAIAGDQADCESMYALKKLLESLGSAN
                     MDCRQDSAAVGDGSR"
     gene            complement(1062..>2018)
                     /gene="nuoF"
                     /locus_tag="QF359_04445"
     CDS             complement(1062..>2018)
                     /gene="nuoF"
                     /locus_tag="QF359_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HJO86190.1"
                     /translation="CLVASFAIGANTAYIYVRGEFYRETEVLQHAIDEAYEDGLIGKN
                     ASGSGWDFELYIHRGMGAYICGEETALIESIEGKKGQPRLKPPFPANKGLYGCPSTVN
                     NVESIAVIPEILRRGAVWFESLGRPNNTGTKLFNISGHVEQPCTVEEEMSIPLKELID
                     KHAGGVRGGWDNLLAIIPGGASVPCLTKGVCETVLMDFDSLKEQGSGLGTAAIMVMDK
                     STDIIAAIARLSAFYQHESCGQCTPCREGTGWMSRMMARMVAGNANLEEIDLLEQVTR
                     QVEGHTICALGDAAAWPIQGLIKNFRPELEARIEQAKKNAVA"
BASE COUNT          471 a          563 c          488 g          496 t
ORIGIN      
        1 cacgtgagcc gtcgccaacc gcagcgctat cttggcggca atccatattg gctgagccaa
       61 gagactctag aagttttttc agcgcataca tggattcaca atcggcttga tcgccggcaa
      121 tcgcggcaat tttactgcca ctcgtagctt taactttggc tgcaaccaca gcaaaggctt
      181 cgtcccagct tgccgcctgc aatttaccgt cttggcggat ataaggttga tccaagcgtt
      241 gacggcgcag accatcacag gcaaagcgtg acttgtcgga aatccattcc tcattcacat
      301 catcattatt gcgcggcacg atgcgcaaca cttcagcacc gcgagtatcg atccggatat
      361 tagcgccgag cgcatccatg acatcaatgc tttcggtttt cttaagctcc cacggccgcg
      421 cattaaaggc gtacggtttt gaagttagcg cgccaaccgg gcataagtct atgatatttc
      481 cggataattc agatgacagc gtcttctcga cataggtgcc gacttcggta tgctcacccc
      541 ggcctgtcgc gccaagttcc ggtacgccag cgatctcggt ggcaaaacga atgcagcgag
      601 tgcagtggat gcagcgcgtc attacggtag aaaccagagg accgaaattt ttgtttttaa
      661 cggtacgttt ttcttcagag tagcgtgagc ggtcgtagcc aaaacctatc gactgatctt
      721 gcagatcaca ttcgccgcct tgatcacaaa ttggacaatc gagtggatga ttgatcagca
      781 aaaactccat tacgcctttg cgggcttggc gaatggtttc ggaatccgtg atgatgatca
      841 taccgtcgtc gaccggcatt gcacaggacg caattagttt tggtgcgcgt tccatctcga
      901 ctaaacacat gcggcaattt ccagcgacag aaagccgttc gtgataacag aagcgcggta
      961 tttcacgacc agcaatctca caagcctgca atacggtcag ccctgcatcc acttcaattt
     1021 ccacaccatc aattgttagc ttcggcattt acatttccac tttaagccac tgcgtttttc
     1081 ttagcttgtt cgatcctagc ttccagttca ggccggaagt ttttgatcaa accctggatc
     1141 ggccaagccg ccgcatcgcc aagcgcacaa atagtgtgcc cctcgacttg acgggtgact
     1201 tgttcgagca ggtcaatttc ttcgaggttg gcattacctg ccaccatgcg cgccatcatg
     1261 cgcgacatcc agccagtgcc ttcccggcac ggcgtgcact gaccgcagct ttcatgctgg
     1321 taaaatgccg acagacgagc aattgcagcg attatgtcgg tcgacttatc catcaccata
     1381 atggcggcag tgccgagacc ggacccctgt tcttttaagg aatcaaaatc catcagcacg
     1441 gtttcgcata cgcctttggt caggcacggc accgatgcgc cgcccggtat gatcgccagc
     1501 aaattatccc agccgccgcg cacgccaccg gcatgtttgt cgatcagttc tttaagcgga
     1561 atgctcattt cctcttcgac cgtacacggc tgctcgacat gaccggaaat attgaacagt
     1621 ttggtgccag tattgttggg acgccctaag gattcaaacc atacagcgcc acgacgcaat
     1681 atctccggaa tgacggcgat agattcgaca ttgtttaccg ttgatgggca gccataaagt
     1741 cccttattcg ccgggaatgg cggcttcagg cgaggctggc cttttttacc ttcgatgctt
     1801 tcaatcaggg cggtttcttc gccgcagata taagcgccca taccacggtg gatatagagt
     1861 tcaaaatccc atccggaacc gctggcattt ttgccaatca ggccgtcctc ataagcttca
     1921 tcgatggcgt gttggagcac ttcggtttca cggtagaact cacctcggac atatatataa
     1981 gccgtgttgg cgccaatggc gaagctcgcg actaaaca
//
LOCUS       DASCNL010000330         1423 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000715674, whole genome shotgun sequence.
ACCESSION   DASCNL010000330 DASCNL010000000
VERSION     DASCNL010000330.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1423)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1423)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000715674"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            144..1175
                     /gene="queA"
                     /locus_tag="QF359_04450"
     CDS             144..1175
                     /gene="queA"
                     /locus_tag="QF359_04450"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HJO86191.1"
                     /translation="MKVSDFDFDLPQELIAQHLLEPRDAARLLHIGENLSDLGVKDLP
                     GLLNPGDILVFNNTKVIPSRLTGKRGEATVEVTLHKQDSNNTWWAFARPAKRLRPGDK
                     LIFGFDFKCSIEEKREGGEVLLSFEGGISELMAGLDHYGYMPLPPYIKRDKGGNVEDL
                     ADYQTLYAEREGAVAAPTAGLHFTGDLMVELDQNSIKKAFVTLHVGAGTFLPVKAEDT
                     DDHIMHAEWGEIDQATADAINQARAAGGKVVPVGSTSLRLLETAADVEGKLHPFTGET
                     DIFITPSYSFKISDKMVTNFHLPKSTLFILIAALAGIERVKAAYTHAIQANYRFFSYG
                     DVCLIEKSI"
     gene            1172..>1423
                     /locus_tag="QF359_04455"
     CDS             1172..>1423
                     /locus_tag="QF359_04455"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-guanine transglycosylase"
                     /protein_id="HJO86192.1"
                     /translation="MTDFSYTVSATDGAARLGQIATAHGVIDTPAFMPVGTAGTVKAM
                     TPESVSETGAQIVLGNTYHLMLRPGADRVERLGGLHKFMN"
BASE COUNT          337 a          345 c          394 g          347 t
ORIGIN      
        1 tccggattct ccaatggttc cagcccacct atattggcgg caaggcggag cacgtcttta
       61 ttataaatat cgtcgatcac ggtgtttgga atatagtcgc ctagaagttt gctcgccagc
      121 ccctaatcgg ctaaagcact caaatgaaag tttcggattt tgattttgac ttgccccagg
      181 aattgatcgc gcaacatctc ctagagccac gggatgccgc acggctgttg catattggcg
      241 aaaatctcag cgatctcggc gtcaaagacc tgccaggctt gcttaatcca ggcgatatat
      301 tggtcttcaa caacaccaaa gtcatcccgt cgcgcctgac cggcaagcgc ggagaggcga
      361 ctgtcgaggt cacactccac aagcaggata gcaacaatac ttggtgggct tttgcccggc
      421 cggccaagcg tctgcgtccg ggtgacaagt taatcttcgg ttttgatttt aaatgtagta
      481 tcgaggaaaa gcgcgaaggc ggtgaagttt tactatcatt cgaaggcggt ataagtgagc
      541 tgatggccgg gcttgatcat tatggctata tgccgctgcc gccttatatc aagcgcgaca
      601 aaggtggtaa tgtagaagac ctggctgatt accaaacgct ttatgccgag cgtgagggcg
      661 cggttgctgc tcccactgcc gggctgcatt tcaccgggga cctgatggtg gaactcgatc
      721 aaaacagcat caaaaaggcc tttgtcacgc tgcatgtcgg ggcggggacg tttctgccgg
      781 tgaaagccga ggacactgat gatcatatca tgcatgcgga atggggtgag attgatcaag
      841 cgacagccga cgcaattaac caagcccgcg ccgccggtgg caaagtagtc ccggtcggtt
      901 cgacatcttt gcgcctgttg gaaacagctg cagatgtcga ggggaagctt catcccttta
      961 ccggtgagac ggatatattt attaccccaa gttatagctt taaaatttcg gataagatgg
     1021 tgacgaattt tcacttgcca aaatcgacct tatttatatt gatagctgcc ctcgcgggaa
     1081 tcgagcgggt taaggcagcc tatacccacg ctattcaagc aaactaccgt ttcttttcct
     1141 atggtgatgt gtgcctgata gagaaatcga tatgacggat ttttcctata cggttagcgc
     1201 cacagatggt gccgcgcgtt tgggtcagat tgcgacggct cacggggtga tcgatacgcc
     1261 ggcctttatg ccggtgggga cagccggtac ggtaaaggcc atgacaccgg agtcggtttc
     1321 tgaaaccggc gcgcaaattg ttctcggtaa tacctatcac ttgatgctgc ggccaggcgc
     1381 ggacagggtg gagcgcttgg gtggacttca taaattcatg aac
//
LOCUS       DASCNL010000331         7547 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000721527, whole genome shotgun sequence.
ACCESSION   DASCNL010000331 DASCNL010000000
VERSION     DASCNL010000331.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 7547)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7547)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7547
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000721527"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            348..2231
                     /locus_tag="QF359_04460"
     CDS             348..2231
                     /locus_tag="QF359_04460"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="feruloyl-CoA synthase"
                     /protein_id="HJO86193.1"
                     /translation="MSENTVNPATMDQIPFAKVHFAKRDLTINHRADGSIILQTKIPL
                     GTYPQQLSDYLRRWARTDPDRKFLVERDPAGAWRSITYGEATSAADSISQALINLGIC
                     SAKNKTSPPVVTLGGNSIQMALLSLGAMQIGVPFAPISPSYSVMSKDFSKLKYIIDLI
                     DPALVYVPEADPFKNALEAVMEPNVQFVSCDGAPGFIPFADLTKGTPGSEFTQVYNAV
                     TGDSIAKYLFTSGSTGMPKAVITTQRMLSSNATAVCQLLPVLEDHPPIIVDWLPWNHV
                     AAGNLNFNVILRCGGTYYLDNGQPKPGEFETTINNLKDIQPTYMQNVPLVYERLVPYL
                     EENDEFARHLFGRMDFMLYAAAPMLAPVQQRLDAVSAKAVGKRIPFISSLGATETAPA
                     CIMCHWPSEVSGNLGLPMPGVDIKLVPNAGKMEMCVSGPNVTSGYLGNEQATKTAFDD
                     EGFYCMGDAVKFVDSDKPEEGLQFDGRISENFKLTSGTWVQTGEVRIGAISAISPLGQ
                     DAAVTGDMRVEIGLLLFLNQAECVKAFDLSPNVTLAELAENSDLRAHLKEKFVAYNYE
                     QKGSSRRIARLMIMTELPSVQNNEITDKGYLNQMATLTARQSLVEQLYDNNQNNPAVV
                     VIS"
     gene            complement(2532..2714)
                     /locus_tag="QF359_04465"
     CDS             complement(2532..2714)
                     /locus_tag="QF359_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86194.1"
                     /translation="MSKSPNVCADNIRQSIRGLPAATPFFIINGAGLFCLWCIDVVKS
                     NAGASYTDVIAVSDLG"
     gene            complement(2861..3991)
                     /locus_tag="QF359_04470"
     CDS             complement(2861..3991)
                     /locus_tag="QF359_04470"
                     /inference="COORDINATES: protein motif:HMM:NF014893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJO86195.1"
                     /translation="MRKPLDEIGLAIIGCGVIARFRSQIARDFPGVKWLGLCDIREEF
                     GRTLADDINADYFTTNMEELVNRPEVNAVMIITDENRHFDPVAAAIEAGVKYLLIEKP
                     LATESLESAKILKMIQDNNVDASIGYTVRFNRRYLTVKERLQNGQIGDVHSVVTRAFM
                     NRMVPMATIRKTNQRHNLTPMVVSGTHSLDMSLWFLEGKKPISVYAQSVDKTLSDWGT
                     KDSTFGVFTMDDGTIFSMSISWALPEVWPGSVYGLEIGIVGSEGVIDIEDTHRDLIMA
                     TNNPIGHGYNPDGYDPDVNRYVDFLESYPPGSYLDGQLWGANRDETLSWFTRVTRGGK
                     SPHATAEEGHRNLLLTMAMDLSARTGEVVHLPNDLNDLIPDF"
     gene            complement(4064..4816)
                     /locus_tag="QF359_04475"
     CDS             complement(4064..4816)
                     /locus_tag="QF359_04475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86196.1"
                     /translation="MDQSIRICWYDLPESRRDEYLSWLHEIYLPKIQSRAGVIWVAHY
                     EIIKTDAMIQKLSDFIGRPDPSESIPTGSQFAMMIAAGSPHYFFKPNFDDIKCSDATE
                     KEMMSLPQNLRAVVTAEQARVNGPEFGSRTTCSTPAPFIQLGHFCVRSVEEEFDLVSW
                     YADYRFPAIARMTGAIRARKMLTVAGWAKHVVIYEFTSRESHEEHFMGHESLAFTDGE
                     WTNRVVLYTQHAPGSPSIGQRIWPKVDASEGN"
     gene            complement(4998..5861)
                     /locus_tag="QF359_04480"
     CDS             complement(4998..5861)
                     /locus_tag="QF359_04480"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO86197.1"
                     /translation="MPDGDGPHPLVVMAGGWCYVKEIVMPHYAKFFEDKEIGTLLFDY
                     RYLGASDGEPRQHIDPWQQIEDYRNALSFAATLDSVDPTRTGIWGISYSGGHVLITAG
                     IDPRVKFAISTIPVVFGFPTMRRCHGERRFTDMMKLVADDRERRYRGEPGGAMAFSAL
                     DPNSEDSVWPFPTIHEVFNTIKQSEAPRHEHWNTIESLELLINYDVEPYCRRIIDTPV
                     LMTVAEGDNITSHDLEVEAFNSITNPNKTLEVIEGVNHMSLYSNRDHLAMVGSIQSAW
                     LEGIVVGAATE"
     gene            complement(6129..6503)
                     /locus_tag="QF359_04485"
     CDS             complement(6129..6503)
                     /locus_tag="QF359_04485"
                     /inference="COORDINATES: protein motif:HMM:NF012417.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO86198.1"
                     /translation="MALSENVELHEMADLIEFSEEARIRKKLVQSKGAVCEFVCYLPG
                     QHTVLHQHPMQDEIFYIVEGSGTIIFDDRDNIPVKQSSVVFVPAGVPHGIATNDTNRL
                     VVMFTKGPGVTGKAAKGFMLGE"
     gene            complement(6521..6595)
                     /locus_tag="QF359_04490"
     tRNA            complement(6521..6595)
                     /locus_tag="QF359_04490"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6561..6563),aa:Asn,seq:gtt)
     gene            complement(6603..6676)
                     /locus_tag="QF359_04495"
     tRNA            complement(6603..6676)
                     /locus_tag="QF359_04495"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6642..6644),aa:Cys,seq:gca)
     gene            7049..>7547
                     /locus_tag="QF359_04500"
     CDS             7049..>7547
                     /locus_tag="QF359_04500"
                     /inference="COORDINATES: protein motif:HMM:NF013315.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HJO86199.1"
                     /translation="MDYRAVRQNMVENQIRPNRVTDAAVIAAMADVPREMFVPDDVAG
                     IAYVDEAAPLGDGRYLMEPLLLARILQGAQISADDMVLSIGCGTGYAAAVLAKVAKAV
                     VAVEVNNELAEKAGALMVELGIDNAVVIEDTLADGYAKQAPYDAIVFCGAVEEVPDAV
                     LDQLAE"
BASE COUNT         1897 a         1812 c         1858 g         1980 t
ORIGIN      
        1 taattattgg ggtttttgct ggtggaagtg gacgaagtaa ggaagggtat ccataaaaat
       61 tattggtaga tggaaattgt ttcaaacatc tcatcgacct ccgtgttagt tacaccaaaa
      121 gaagggataa acagcttgag tgaaattttt tatttcatga ccgggatttt acaggattta
      181 gctgtataag ttattgatgc aggtcaacga aatcagcata tcggtttgtc ttcttgacaa
      241 caaaccttct gaaatttgag aaaaagtcca ttatccggac aagttcattg atgtcggtca
      301 atttggtgtc acggactttc agatattgat atcatacgaa agtttagatg agtgagaaca
      361 ctgtgaaccc agcaaccatg gaccagatac cattcgccaa ggtacatttc gccaagcgcg
      421 atttgactat caaccatcgt gcagatggat caataattct tcagaccaaa attccgctcg
      481 gcacctaccc tcagcagctt tcggactacc ttagacggtg ggcccgcact gatcccgacc
      541 gcaaattttt ggtcgagcgc gacccggctg gagcgtggcg gtcaattact tatggcgaag
      601 ccacgagcgc cgccgatagt atctcgcaag cgctgattaa tttgggaatt tgttcagcca
      661 aaaataaaac cagcccgccc gtcgtcaccc tcggcggcaa ttcaatccaa atggcgctgc
      721 tttccctcgg agcaatgcag atcggcgtgc ctttcgcccc tatctcaccc agctactccg
      781 tgatgagtaa ggatttcagt aagcttaaat acattattga tctgattgac ccggcattgg
      841 tctatgtgcc cgaagccgat cctttcaaga atgcgctaga ggctgtgatg gagccaaatg
      901 tgcagtttgt ttcctgtgac ggtgcaccag gttttatacc gtttgccgat ctcaccaaag
      961 gaaccccggg atctgaattc acccaagtat ataacgccgt aaccggtgac tcgattgcca
     1021 aatatctgtt cacctcaggc tccaccggta tgccgaaagc cgttatcacc acacagcgta
     1081 tgttgtcttc caacgcaacg gcagtgtgtc agctcctgcc agttttagaa gaccatccgc
     1141 caatcatcgt tgactggctg ccttggaatc atgtcgctgc cggcaattta aactttaatg
     1201 ttatcctgcg gtgcggcggc acttactacc tcgacaacgg gcaacccaaa ccgggcgaat
     1261 ttgaaactac cattaacaat ctcaaagata ttcagcctac ctatatgcag aacgtgccgc
     1321 tcgtctatga acgcctcgtc ccctatctcg aagaaaatga cgagtttgcc cgacacctgt
     1381 ttggcaggat ggattttatg ctctatgcgg cagcgccgat gctggcaccg gtgcagcagc
     1441 ggttggatgc agtcagcgct aaagctgtcg gtaagcgtat tccatttatc tcgtcgctag
     1501 gtgcgactga aaccgcaccg gcctgcatta tgtgtcattg gccttccgag gtgtcgggaa
     1561 atctcggact gccgatgccg ggtgtcgaca ttaagctggt accgaatgcc ggcaagatgg
     1621 aaatgtgcgt cagcggacca aatgtgacta gcggatattt aggcaatgag caggcaacaa
     1681 agaccgcctt tgatgacgaa ggtttttatt gtatgggcga tgcggtcaag tttgttgatt
     1741 ctgataagcc tgaagaaggc ttgcagtttg acggccgcat tagcgaaaat ttcaaactaa
     1801 cctcaggcac ttgggtgcaa acgggagaag tgcggatcgg cgccatcagt gcaatttctc
     1861 cacttggtca agatgctgct gtgactggtg atatgcgtgt tgagatcggc ctgctgcttt
     1921 ttcttaatca agcagaatgc gttaaagctt tcgatctatc acccaatgtt actttggccg
     1981 aattggcgga gaactctgat ctcagagccc acctcaagga aaaatttgtg gcctataatt
     2041 atgagcaaaa aggcagtagt cgccggattg cccgcctgat gattatgaca gaactcccat
     2101 cagttcagaa taatgaaatt accgataagg gttatcttaa tcagatggcg actctcaccg
     2161 ctcgccagtc cttggtcgag caactttatg acaacaatca gaataatccg gcggtagttg
     2221 ttatttcgta gctgtcagca agtcacccgt cttgccggct agtcgttaga gtattaccga
     2281 atgtttcaag tttgtaacat ttcctttcag tatcttgata tcaatccgta aatcacaata
     2341 tccataataa tagggtaatg gcgaattgtt aatttcgcaa cgtaaccaat atgttccaag
     2401 ggcgttggtg ttagacaata tccacaaagt acacaatata ttagacatct ggagaaatta
     2461 atgagaacga tccacctggg accgtggcta attatcgtag gagtgctggt cctcgcttta
     2521 accccgttgc cttacccaag atcactgacg gcgataacat ccgtatagga agcacccgca
     2581 ttagatttca caacatcgat gcaccagagg caaaacaaac ctgcaccatt aatgataaag
     2641 aatggcgttg cggctgggag gccacgaatg ctctggcgaa tattgtcggc gcaaacattg
     2701 ggtgacttgc tcaaagcgtg acacggatcg aaccggacgt gtagtcgcag tgtgcatggc
     2761 tgggccgttc aatccttaat aatttagaat gaattataat atttcgtcat ctcgtcagtt
     2821 aacgaggaaa gagaaatcta ccagtggcgg tttggatttg ctaaaaatcg ggaataaggt
     2881 cattcaggtc gttgggcaaa tgaaccactt caccagtgcg ggcggacagg tccatggcca
     2941 tcgttaaaag taagtttcga tgtccttctt cggccgttgc gtgaggagac ttcccgccac
     3001 gtgtgacgcg cgtgaaccaa gataaagtct cgtcgcggtt agcgccccaa agctggccat
     3061 ctaagtaact acctggtggg tagctttcaa gaaaatctac gtagcggtta acgtcagggt
     3121 catagccgtc tggattataa ccgtgaccaa ttggattatt cgtcgccata attaagtctc
     3181 gatgagtatc ctcaatatca atgaccccct cacttccaac gatgccaatt tctagaccgt
     3241 aaacagaacc tggccaaacc tcgggtaatg cccagctgat gctcatgcta aaaattgtgc
     3301 catcatccat ggtgaagacg ccgaaagtag aatccttcgt gccccaatct gaaagtgttt
     3361 tatcaactga ctgcgcatag acggaaatgg gttttttacc ttccaaaaac cacaaggaca
     3421 tatctagact gtgggttccg gaaactacca ttggcgtcag attatgccgt tgatttgttt
     3481 ttcggatggt ggccatcggt accatcctat tcatgaaggc gcgagtgacc actgaatgaa
     3541 cgtcgccaat ctgtccattt tggagacgtt cttttacagt taaataacgg cgattgaacc
     3601 gaactgtata gccaatactc gcatcgacat tattatcctg aatcatttta agtatttttg
     3661 ccgattctaa ggattctgtg gctaaaggct tttcaattag taaatatttt actccagcct
     3721 caatcgctgc agcaacggga tcaaaatgcc gattttcatc ggtgatgatc ataacggcgt
     3781 tgacttcagg gcgatttacc aattcttcca tattggtcgt aaaataatct gcgttgatat
     3841 cgtcagcgag cgtgcggcca aattcttcac gaatatcaca gagacctagc catttcaccc
     3901 cgggaaagtc ccgtgcaatt tgtgatctaa atcgcgcaat aacgccgcag ccgataatag
     3961 ccaatccgat ttcatctagt ggctttctca tgtgacgtct ctataaatta ttaaacaatg
     4021 ttcactcact tacataactg gaatctattg tcggcgatcg aaattaattt ccttcacttg
     4081 catctacttt cggccaaatt cgctgaccga tgctggggct acccggcgca tgctgggtat
     4141 aaaggacaac acggttggtc cattctccat cggtgaaggc cagcgattcg tgtcccatga
     4201 aatgctcttc atgactttct ctggaggtaa attcgtatat caccacgtgc tttgcccaac
     4261 cagcaaccgt gagcatcttt ctcgccctga tggctccggt cattcgagcg atagccggaa
     4321 agcgatagtc ggcataccaa gataccaaat caaattcttc ttcgaccgaa cgtacgcaaa
     4381 aatgcccgag ttgaataaat ggagcaggtg tggaacacgt tgtacgtgac ccaaattccg
     4441 ggccatttac ccgcgcctgt tcggctgtta cgaccgcgcg gaggttttgg ggcaaggaca
     4501 tcatttcctt ctccgtagcg tccgagcatt tgatatcatc gaaatttggt ttgaagaaat
     4561 aatggggtga tccagctgct atcatcatgg caaattgaga tccggtcgga atggactcac
     4621 ttggatctgg gcgacctata aagtcagaaa gtttctggat cattgcatcc gttttgataa
     4681 tttcgtaatg cgcgacccaa atgaccccag ctcggctttg aattttcggt aagtagattt
     4741 catggagcca agataaatac tcatctcgtc tactttcagg taagtcatac cagcagattc
     4801 taatactttg atccacaata tatcgcctca atatttacga aaaaacacta tttattaaac
     4861 aatatgtcac aagggcgttg atgttagaca tatctccaaa gtagttttgg ttgtggctgt
     4921 ttttgacata cagccgaatc gtatgtgaaa tattcaatgc atcaagctaa aaataatcga
     4981 ttaatgccag gttttaccta ctcggtcgcg gctccgacca cgatcccttc gagccacgcg
     5041 gactgtatcg atccgaccat cgccaggtga tcccggttgg aataaaggct catgtggttg
     5101 acgccctcga taacttcgag ggtcttgttc gggttggtga tgctgttgaa ggcctcgact
     5161 tcgagatcgt gggaggtgat gttatcgccc tcggcgacgg tcatcaatac tggcgtatcg
     5221 atgatccgac ggcaataggg ttcgacgtcg tagttgatca acaattcgag ggattcgatg
     5281 gtattccaat gttcgtggcg tggcgcctcg gactgtttga tggtgttgaa tacctcgtga
     5341 atggtcggga acggccaaac gctgtcttcg ctgttcggat cgagcgccga aaacgccatg
     5401 gcgccacccg gctcgccgcg atagcggcgt tcgcggtcat cggccaccag tttcatcata
     5461 tcggtaaacc ggcgttcgcc atggcatcgg cgcatggttg gaaaaccgaa gaccaccgga
     5521 atggttgaaa tggcgaattt cacccgtgga tcgatgccgg cggtgatcag cacgtggcca
     5581 ccgctgtacg atattcccca gatgccggtg cgggtgggat caacgctgtc gagtgtggcg
     5641 gcgaaactca gggcattgcg gtagtcctcg atctgctgcc acgggtcgat gtgctggcgc
     5701 ggttcgccgt cgctcgctcc caaatagcgg taatcgaaca acaaggtgcc gatttccttg
     5761 tcctcgaaga atttggcgta atggggcatg acgatctctt tcacgtaaca ccatccgccg
     5821 gccatgacga cgagcggatg cggcccgtca ccgtcgggca agtacagatc tcctcggcag
     5881 gtcacgcctc tgctgttgaa ctctatttcc tgtctcattt gattttcccc catattggac
     5941 atttggattt gatttcacgc caccggtcac caaatttaac gtattggtaa atcttagccc
     6001 aatcagtatt aattgcgata gaatatttca ttatttgttt gatccgcggc ctgatcaacc
     6061 aacgtaaagg aatgcaatga gctttgaaat cgacctcacc ggcaaagccg gcagaaatcg
     6121 ctgagggatt attcgccgag cataaagccc ttggccgcct taccggtcac gcccggcccc
     6181 ttggtgaaca tgacgaccaa acggttggta tcgttggtgg caatgccgtg gggaacgccg
     6241 gctggaacga aaacaacact gctttgctta actggaatat tgtcgcggtc atcgaagatt
     6301 attgtcccgc taccctcgac aatatagaaa atttcgtctt gcatgggatg ctgatgtagc
     6361 actgtatgtt gccctggcaa ataacagacg aattcgcata ccgcaccttt ggattgaacg
     6421 agtttcttgc gaatccgggc ttcctcggaa aactcgatga gatcagccat ttcatgaagt
     6481 tcgacgtttt ccgatagtgc catcagtaac ccttaaatat tggctcggga ggagggattc
     6541 gaacccccga caaggtggtt aacagccacc tgctctacca ctgagctact cccgatcagg
     6601 tttggaggcg cggaccggaa tcgaaccggt gttcacggct ttgcaggccg ctgcgtagcc
     6661 actccgccac cgcgccgtat gatctggttt tgatctggcc gcgccaggtc ttttcatcac
     6721 gattaatgca acgcttcgaa tcggcggcag accaatcaga aggccgggaa attagacgtt
     6781 ggactatgtc tggtcaagct gcgtttgacc tagaatcata tatttttaaa actttttttg
     6841 catatttttt tgttttttgg atatttttcg tccaaaccaa cggaaattgg tggaccagcc
     6901 gttatgaggt ggtaaacatc ctttagaatg ttgtcctatc gggtgttgaa agtagggttt
     6961 cagaggtcca tttattgcct gttaggtgat tgtttaatga tagactgggt ctgtcgccgg
     7021 accggattga aataaaagga ttgttgccgt ggattatcga gccgtgcgcc agaatatggt
     7081 ggagaatcaa atccgcccca atcgagtaac cgatgctgcc gtcatcgccg cgatggccga
     7141 tgtgccgcgc gaaatgtttg tgccggatga cgtagccgga atcgcctatg tcgatgaggc
     7201 cgcgccgctt ggcgatggac gctatctgat ggaaccgttg ctgctcgccc gcattttgca
     7261 aggggcgcaa atttccgctg atgatatggt cttaagcatt ggctgtggca ccgggtatgc
     7321 cgctgccgtg ttggccaagg tcgccaaagc tgtcgtcgcc gttgaagtca ataatgagct
     7381 ggcagagaag gcaggcgcct tgatggtcga gctcggcatc gacaatgcgg tggtgattga
     7441 agacacactt gccgatggct atgccaagca agcaccatat gacgcgattg tgttctgcgg
     7501 cgctgtcgaa gaggtaccgg atgctgtact agatcaattg gccgaag
//
LOCUS       DASCNL010000332         5009 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000725364, whole genome shotgun sequence.
ACCESSION   DASCNL010000332 DASCNL010000000
VERSION     DASCNL010000332.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5009)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5009)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5009
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000725364"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(26..367)
                     /locus_tag="QF359_04505"
     CDS             complement(26..367)
                     /locus_tag="QF359_04505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013301493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HJO86200.1"
                     /translation="MTVFMTALVYVGAAVAEIAGSFTFWAWLRLDKSILWVLPGIVSL
                     IIFAALLTRIDAAFAGRAFAAYGGVYIMASLAWLWRIEGMRPDRWDLIGGAICLIGAA
                     VIIFGPRGAVT"
     gene            complement(393..1532)
                     /locus_tag="QF359_04510"
     CDS             complement(393..1532)
                     /locus_tag="QF359_04510"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HJO86201.1"
                     /translation="MAKIHIQGWRFINHSYALVNQHQILALLRRGDIDISFEELPLFD
                     PSWQQSKTGFDDVSLQQLDELSNDKVNADVVIRYWFPYDFTPAGDQPTFVFGTSEFSA
                     LSSDQIKDGQNIMDALAGNDTQILTPSTWSKQGFVNSGVDDSRIHIVPHGIDTNIFCP
                     DPNIDRQGIRERLGAGDNNFLFLNIGAMTTNKGIEQLLAAFTRHRQSNPNALLILKGQ
                     DNLYGSGGKLNKRLSAVAEAQGVALEEILGGLRYIGDDFSPEKMADLYRVADAYVSPY
                     LSEGFNLPVLEAIASGLPIICTAGGPTEDFCSDQFCLKIDSELTDYSQGRQFLSPNIY
                     HLISLMERVQSDDAFRQQAASAGPARAQEKFTWDAVVERLISVIL"
     gene            complement(1538..3463)
                     /gene="selB"
                     /locus_tag="QF359_04515"
     CDS             complement(1538..3463)
                     /gene="selB"
                     /locus_tag="QF359_04515"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HJO86202.1"
                     /translation="MIIATAGHIDHGKTALVQALTGVDTDRLPEEKKRGMSIDLGFAY
                     QPITNGKTLGFVDVPGHERFIRNMLAGVTGIDYAMLIIAADDGPMPQTIEHLAILDLL
                     GVSEGIVALTKIDRVEPERLAEAKDEIENILADTCLEGADILPVSAITGEGVEDVQDH
                     LEAMSELLGERVLIGNFRLAIDRCFTVPGAGLVVTGGVFSGKVTVGDQLILSPQGTSV
                     RVRGIHAQNQESETGVVGQRCAANITGGDLNKTDVHRGDWLLAEKVHDPVPRFDARLR
                     VLPSEGRPLKHWTPVHVHLGAAEVPGRVAVLEEKFIAPGESGLVQIVLDRRIGALRND
                     GFVIRDQSAQRTIAGGRIIDPFGPARGRAKSDRIAFLAAMSKTDANEVLAQLLAQSPL
                     GVDLAHFSVAWNLTPDDQAALWEIVEMVKVGPDENPIGLSPGHFAALGSTTIDVMQDW
                     HGNNPDRSGPGVDALRRILPNRVPLAVFEGVLGSLVSEKKIMHLGANYCLPGFEPKLA
                     SKDAAMWKRVMPALENGYTKPPVVHALAEELSLDHRTLEKFLVRSAKLGLVCQVAKNR
                     FLLPEAVLELGDIVEALGANENTFGVVEFRDRSNIGRNLAIEVLEFFDKSGFTWRTGD
                     VRKVLKPVSEVFGELAE"
     gene            complement(3460..4872)
                     /gene="selA"
                     /locus_tag="QF359_04520"
     CDS             complement(3460..4872)
                     /gene="selA"
                     /locus_tag="QF359_04520"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HJO86203.1"
                     /translation="MPDVQKSLHSKVPSVDSILRLEPVIVLIESYGRSLVTDSIRAVI
                     TNIRNQISELAEQALPVLEEASIVEQLSLFLDRATQPSLRAVYNLTGTVLHTNLGRAV
                     LAEEAIEAMVKVAKGASNLEYEIDSGKRGDRDSHLDKLLCELTGAEAATVVNNNAAAV
                     LLVLNTLGQRKEVPVSRGELIEIGGAFRIPDIMKRAGCKLVEIGTTNRTHLKDYAEAI
                     SGKTACLMKVHTSNYSVQGFTKEVTAQEISVLARDRNLPLIEDLGSGTLIDLSQFGLP
                     HEPTAQEAITSGVDVVTFSGDKLLGGPQAGLIVGRKDLIAKIKKNPIKRAMRLDKVTI
                     AALTATLQLYLDPDSLAARVPTIRMLARSIGDIQLVAEQVRDPIAAAVGDAYAALIID
                     CQSQVGSGSLPVERLPSKALAIGTTKGKPGGKLQKLADAFRALPTPVIGRIQDDAFLL
                     DLRCLEDVDGFAAQLGDLKL"
BASE COUNT         1268 a         1394 c         1191 g         1156 t
ORIGIN      
        1 ataaattcgc cgctccgatc aaaatttagg taaccgctcc ccgcgggcca aaaataatga
       61 ctgcagcgcc aatcaggcag atcgccccac cgatcaaatc ccagcgatcg ggccgcatac
      121 cttcgatccg ccacaaccag gccagcgatg ccatgatata gacgccgccg taagcggcaa
      181 atgcgcgtcc ggcaaaagct gcatcgatgc gagtcagcag agcggcaaat atgatcaatg
      241 acacaatacc cggcaatacc caaaggatcg atttatcgag ccgcaaccat gcccagaagg
      301 taaaactgcc ggcgatttcc gccaccgctg caccgacata aaccagcgcc gtcataaata
      361 ccgtcattat ttaactccga tcagtcgtat atttaaagaa taacagaaat taggcgctcg
      421 acgacagcat cccaggtaaa tttctcttga gcccgagccg ggccggcgct ggcggcttgt
      481 tggcgaaagg catcatcgct ctgcacgcgt tccatcagag atattaagtg atagatattt
      541 ggcgacaaaa actggcggcc ttgtgaataa tcagtgagct cgctgtcgat cttgagacaa
      601 aactggtcgc tacagaagtc ctcggtcggc ccaccggcgg tacaaattat aggcaagccg
      661 ctcgcaatcg cttccaggac tggcaaatta aatccttcgg agagataagg ggatacataa
      721 gcatcggcga cgcggtaaag atcggccatt ttttccgggg aaaaatcatc accaatgtaa
      781 cgcaagccac cgagaatttc ctcaagtgca acgccttggg cctcggctac tgcgctcaag
      841 cgcttgttga gcttgccgcc agatccataa agattgtcct gcccttttaa aatcagcagt
      901 gcattgggat tgctttgacg atggcgggtg aaagcagcca ggagctgttc gatcccttta
      961 ttggtcgtca tcgcaccgat attcagaaat aaaaagttgt tgtccccggc tccgagcctt
     1021 tcccgtatgc cctgccggtc aatgtttgga tccgggcaaa aaatgttggt atctatacca
     1081 tggggcacaa tatggatacg gctgtcgtcg acacccgaat tgacgaaacc ctgcttggac
     1141 caagttgacg gtgtcaaaat ttgggtgtca ttgccggcca gggcatccat tatattttgc
     1201 ccatctttga tctgatcaga actaagggca ctaaactctg acgtgccgaa aacaaaggtg
     1261 ggttggtcac ccgcaggtgt aaaatcatag ggaaaccaat agcggataac cacatcggca
     1321 ttgactttgt cgtttgagag ttcatcaagc tgttgcaacg agacatcatc aaatcctgtc
     1381 tttgattgct gccagctcgg atcaaaaagt ggcaattctt caaacgaaat atcgatatcg
     1441 ccacggcgca gcaaagctag tatctgatgc tggttcacca gcgcatagga atgattgata
     1501 aagcgccagc cctgaatgtg aatttttgcc atgtccccta ctcggccagt tcgccaaaca
     1561 cctcagatac tggctttaaa actttacgta catcaccagt gcgccaggta aagccggatt
     1621 tatcaaagaa ttccaaaact tcaattgcca gattgcggcc aatattacta cggtcgcgaa
     1681 attccaccac cccgaaagta ttttcatttg cgccgagggc ttcgacgata tctccaagtt
     1741 ccaatacggc ttctggcaac agaaagcggt ttttagcaac ctgacatacc agacccaatt
     1801 tagctgatct cactaaaaac ttttccagcg tgcgatgatc aagtgaaagt tcttcagcga
     1861 gcgcgtgtac aactggtggc ttggtatagc cattttcaag agcaggcatc acccgcttcc
     1921 acatggctgc atctttgctg gcgagtttgg gctcaaaccc cggcaagcaa tagttggcac
     1981 ccaaatgcat aatctttttt tccgacacca gacttccgag cactccctca aacaccgcta
     2041 atggcacccg gttcggcagt atccggcgga gcgcatcaac gccgggtccg gaacgatcag
     2101 gattattacc atgccagtct tgcatcacgt cgatagttgt cgagccgagc gcggcaaaat
     2161 gtcccggcga cagcccgatg gggttttcat ccggtccgac tttaaccatc tcaacaattt
     2221 cccaaagtgc tgcctgatca tccggcgtta aattccaggc aaccgagaaa tgagccagat
     2281 cgacacccaa gggcgattga gccaacaatt gcgccagcac ttcattcgca tcggtcttgg
     2341 acatcgcagc caaaaaagcg atgcgatccg acttggcgcg accgcgagct ggtccaaatg
     2401 gatcaataat acggccgccg gctatggttc gctgtgctga ttggtcacga ataacaaagc
     2461 catcgttacg caatgcaccg atgcgacgat ctagcacgat ctgcaccaaa ccgctttcgc
     2521 caggtgcaat gaatttctct tcaagcacgg cgacccgacc cggcacttcg gcggcgccta
     2581 agtgaacatg aactggggtc caatgcttga gcggccgacc ttcgctcggt agcacccgca
     2641 accgggcatc aaagcgcggc accggatcgt ggactttctc agctaggagc caatctccac
     2701 gatgaacgtc agttttattg agatcaccac cggtgatatt ggccgcacag cgttggccga
     2761 ccactccggt ttccgattct tggttttgcg catgaatgcc acgcacccgg acactggtac
     2821 cttgtgggga caagataagc tgatcgccga cggtgacttt tcctgaaaat acaccaccgg
     2881 tcaccaccag ccctgccccc ggcacggtga agcaacgatc aatggcgaga cggaaattac
     2941 ctatcaatac gcgctcaccc agcaattccg acattgcttc aaggtgatcc tgcacatcct
     3001 cgacaccttc accggtaatc gccgaaaccg gcaggatgtc ggccccttcg agacatgtat
     3061 cagcaagaat attttcaatc tcatctttag cttcagcgag tcgctccggc tcaacccggt
     3121 caatcttggt cagggcaaca atcccttccg aaacgcccaa caaatccaga atagccaagt
     3181 gctcgatggt ttgcggcatc ggtccatcat cggcggcgat gatcaacatg gcgtaatcaa
     3241 taccggtaac gccagccagc atattgcgaa taaatctttc atggcccggc acatcaacaa
     3301 agccgagggt tttgccattg gtaatcggct gataggcaaa gccaagatca atcgacatac
     3361 cgcgcttttt ctcttccggc aaccggtcgg tatcgacgcc agttagggcc tgaacgagag
     3421 cggtcttacc gtggtcaata tggcctgccg tggcgatgat catagtttta gatcacctag
     3481 ctgcgccgca aatccatcga catcttcgag gcagcgtaaa tcgagcagaa aagcatcatc
     3541 ctggatgcgg ccaatcaccg gtgtcggcaa cgcccgaaag gcatccgcca gtttctgcaa
     3601 cttgccaccg ggtttacctt tggtggtgcc gatagccagc gctttgctcg gcaggcgttc
     3661 aactggcaat gagccactgc cgacctggct ttggcaatca attatcaagg ccgcatacgc
     3721 atcgcctact gctgccgcga tcgggtctcg tacttgctcc gccaccagct gaatatcacc
     3781 aatagagcgc gccagcatgc gaatggtcgg cacccgcgct gccaaactat cgggatcaag
     3841 ataaagctgt aaggttgccg tcagcgccgc gatcgtcact ttatccaacc gcatggcgcg
     3901 ttttatcggg ttcttcttga tcttggcaat gagatctttg cgtccgacga tcagcccggc
     3961 ctgtggacca ccgagcaatt tatcgccact aaacgttacc acgtcgacgc cgctagtaat
     4021 cgcttcctga gcggttggct catggggcag cccaaactgg gataaatcaa tcaaagtacc
     4081 gctgcctaaa tcctcgatta gcggtaagtt ccgatcccgg gccagcaccg atatttcctg
     4141 ggcagtcact tccttagtaa atccctgcac cgagtaatta ctggtatgaa ctttcatcag
     4201 gcacgcggtt ttaccactga tggcttcggc atagtctttc aaatgagttc gattggtggt
     4261 gccgatctca acaagcttgc agccggcgcg tttcataatg tccggaatac gaaatgcccc
     4321 gccaatttcg atcaactccc cccgggacac cggcacttct ttgcgctgcc ctaatgtatt
     4381 aagcaccaac agtaccgctg ccgcattatt gttgacgacg gttgcggctt ccgctccggt
     4441 gagttcgcat aacagcttat ccaaatggct atcacgatcg ccacgtttac cgctgtcgat
     4501 ttcgtattcc agattggatg ctcctttggc gaccttgacc atggcttcga tcgcttcttc
     4561 agccaatacg gcgcgaccga gattggtatg caaaaccgtg cccgtaagat tataaaccgc
     4621 tcgcaaagac ggttgcgttg cgcgatctag aaatagactg agctgttcga caatcgaggc
     4681 ttcctccagc accggcaatg cctgctcggc aagctcgctg atttgattgc gaatattggt
     4741 aataaccgca cgaatagaat ccgtcaccag agatcggcca tagctctcaa ttaaaacaat
     4801 cacaggttct aatcgtagaa tggagtctac acttggtact ttagaatgga gagatttttg
     4861 aacgtcaggc atatgaacac acggtcctca tttagtgacg gagagcttaa gctatgtttc
     4921 caaatgaggc ccgtcaagat acctgtcggt aacttacatt taaattagac tttggatcag
     4981 ctttcttgtt cgattttatt ttcgataat
//
LOCUS       DASCNL010000333         1426 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000727794, whole genome shotgun sequence.
ACCESSION   DASCNL010000333 DASCNL010000000
VERSION     DASCNL010000333.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1426)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1426)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000727794"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="QF359_04525"
     CDS             <1..284
                     /locus_tag="QF359_04525"
                     /inference="COORDINATES: protein motif:HMM:TIGR01727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HJO86204.1"
                     /translation="AHPRMPYTEALMNSAPALSDPPHTRLNAIPGLPPNLLDVPPGCR
                     FHARCPNVQDKCKVDMPELLVEDNSEHSFACWHPLANGKAGEMASGLIQ"
     gene            284..1249
                     /locus_tag="QF359_04530"
     CDS             284..1249
                     /locus_tag="QF359_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HJO86205.1"
                     /translation="MSNATLLEVSDVTVEYVTQGQRFAAISDVTLDIAEGETLGLVGE
                     SGCGKSTTGRAIIQLPTPTAGQVKFEGQELTGLTHNDMRPIRQRLQIIFQDPVSSLNP
                     RRRVKDIVAEPLIIDGLKNTAEIDRKVREVLNAVGMDPDITMDRRPHQFSGGQCQRIC
                     IARALIMEPKLIVCDEPVSALDVSVQAQILNLLEDMKARYGLTLLFISHDLAVVKNIS
                     DRVAVMYLGKFCELADSERIYQAPAHPYTAGLMATIPEIGDKAIDNAQALAGEIPSPL
                     NPPSGCRFRTRCPCAQEKCVADEPAFRDIEPGHQVACHFPLLASK"
BASE COUNT          336 a          353 c          357 g          380 t
ORIGIN      
        1 tagcccatcc acgcatgccc tataccgaag ctttgatgaa ttccgctccg gccttgtccg
       61 atccgccgca tacgcgctta aacgctatcc cgggcctgcc gccaaactta ttggacgttc
      121 cgcctggctg ccgctttcat gcccgctgtc caaatgtcca agataagtgc aaagtcgata
      181 tgcccgagct tttggtggaa gataattccg aacattcgtt tgcctgctgg cacccgttgg
      241 caaacggcaa agccggtgaa atggccagcg ggttaatcca ataatgagca atgctactct
      301 tctcgaagtc agtgatgtaa ccgtcgaata tgttactcaa ggccagcgct ttgccgccat
      361 ttctgatgtt actttggata ttgccgaggg cgagacactc ggtctggtgg gtgagtcagg
      421 ttgtggtaaa tcaactaccg gacgcgcgat cattcaatta ccaacaccga ccgccggtca
      481 ggtcaagttt gaaggccagg agcttaccgg attaactcac aatgatatgc ggccaattcg
      541 tcagcgcctg cagatcattt tccaagatcc cgtttcctcg ttaaatccac gccgacgagt
      601 caaagatatt gtcgccgaac cgctgatcat tgacggcttg aaaaataccg ctgaaattga
      661 tcgcaaagtg cgcgaagtgc tcaatgcagt tggcatggac ccggacatca ccatggaccg
      721 gcggccgcat cagttctcgg gcggtcagtg tcagcgcatc tgtattgcgc gggccctgat
      781 tatggagccg aagctaatcg tctgtgacga accggtctca gcattggacg tttcggtgca
      841 ggcgcagata ttgaatttac tcgaagatat gaaggcgcgt tatggcttaa ccttactgtt
      901 tatcagccat gatcttgcag ttgtgaagaa tattagtgac cgggtggccg tcatgtatct
      961 cggaaagttc tgcgaattgg ccgattctga gcgaatttat caagctcccg cccatcccta
     1021 taccgcgggc ttgatggcga caattcctga aattggtgat aaggctattg ataacgcgca
     1081 agccttggcg ggcgagattc cgtcacctct taatccacca agcgggtgcc gctttagaac
     1141 ccgttgcccc tgtgcgcaag aaaaatgcgt tgccgatgaa ccagctttta gagatattga
     1201 accgggacac caagtggcct gtcattttcc tctgctggcg agtaagtaga attaagtatt
     1261 tcagattaaa acttttgcat ctgatcccgg ttttttcctg gtgactttgc gagttttatg
     1321 gtgcttaatt tactgccggg tgatcataaa aagctccctt ggtgtttttt aaagatttct
     1381 ttttggagtt taaaggtttg ttgactttaa tcaaacgcag taagaa
//
LOCUS       DASCNL010000334         1559 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000729928, whole genome shotgun sequence.
ACCESSION   DASCNL010000334 DASCNL010000000
VERSION     DASCNL010000334.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000729928"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="QF359_04535"
     CDS             complement(<1..228)
                     /locus_tag="QF359_04535"
                     /inference="COORDINATES: protein motif:HMM:NF019843.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86206.1"
                     /translation="MKTIFSIITLAVLFSPFNLSMAQVSPPVNYGQSLTWLKRAAESG
                     DAEAQYLLARQLEIGLEVDADIKSAAKWFAKS"
     gene            complement(225..464)
                     /locus_tag="QF359_04540"
     CDS             complement(225..464)
                     /locus_tag="QF359_04540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86207.1"
                     /translation="MAFGKPLPQKTLDEETTAELKNLRITEPVPPNTAKTQKRTTVEL
                     AEENKKSYLLWQYCNLPVIIDPMHFMYRIFCLRNL"
     gene            complement(655..>1559)
                     /locus_tag="QF359_04545"
     CDS             complement(655..>1559)
                     /locus_tag="QF359_04545"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MDR family oxidoreductase"
                     /protein_id="HJO86208.1"
                     /translation="DVVVAVYYSTLNYKDGLILKGLGGLLRNYPHVPGVDLSGVVESS
                     ESANFSAGDRVVLNGWRFGEMCWGGYAQKARVKSDWLVKLPDNISNEQAMAIGTAGYT
                     AMLAVMALEDHGLTPDSEGEVLITGAAGGVGSIATAILANLDYQVTASTGRVETAEYL
                     TSLGAASIVSREKLEEAPKGPLSGERWAGAIDNVGGPILANVLAGMKYHASVAAIGLA
                     ASAKLETTVVPFIIRGVNLLGIDSVMCPKDKRIVAWDRLSKELPQDKLGDAATIVGLG
                     DIAGFADDILAGKVKGRVVVDVNA"
BASE COUNT          422 a          420 c          311 g          406 t
ORIGIN      
        1 agatttggca aaccatttgg ccgcgctctt gatatcagca tcgacctcca acccaatctc
       61 caattgacgg gctaataaat attgggcctc ggcatcgccg ctttcagccg cgcgttttaa
      121 ccaggttagc gattggccat aatttaccgg tggagatacc tgtgccatac taaggttgaa
      181 cggggaaaat aataccgcca aggtaataat tgaaaatata gtcttcataa attcctcaaa
      241 caaaaaatcc gatacataaa atgcatcggg tctataataa ccggcagatt acaatactgc
      301 cataaaagat aagatttttt attttcttcg gctaattcaa cggttgttct tttttgggtt
      361 ttggccgtat ttggcggcac gggttcagta atccgcagat tttttaattc agccgtagtt
      421 tcttcatcca aagttttttg tggtagcggt ttgccaaaag ccacagtgcg caacacccac
      481 taaacataca ttttttggga aagctgtatt aatcgcatca accagctaat ctgatactat
      541 tcccatttct aattacccct taagttagtt tatttctgca ctcataaatg cccggtaaat
      601 ttagtctgat tcaatgatcc atttatacaa aaacataatc gatttgacac gcccttaagc
      661 gttcacatct acaacaaccc ggcctttgac ttttccagca agaatatcat cggcgaaacc
      721 ggcaatatct cctagaccaa caatagtcgc tgcatcacca agcttatcct gcggcaattc
      781 ttttgacagc cggtcccagg caacaatacg tttatctttg ggacacatga cggaatcgat
      841 gccaagtaaa ttaacaccgc gaataataaa cggcaccacg gtggtttcca gtttggctga
      901 ggctgccaat ccaatggcgg caacgctggc atgatatttc atgccggcca gcacattagc
      961 gagaataggc ccgccgacat tgtcaattgc cccagcccag cgctcaccag aaagcggtcc
     1021 cttgggcgct tcttcaagtt tttcccggct gacaatactc gctgcaccta acgaggtgag
     1081 atattctgcg gtttcaaccc gaccggtcga agccgtaacc tgatagtcga gattggccag
     1141 gatagctgtc gcaatgctgc ctactccacc ggcagcgcca gtgattaaaa cttcgccttc
     1201 actgtccggc gtcaatccgt gatcttccag cgccatcacc gccagcatgg ccgtgtagcc
     1261 tgccgtacca atcgccatcg cctgctcatt tgaaatatta tcgggcaatt tcaccagcca
     1321 gtcggattta acccgggctt tctgcgcata gccgccccaa cacatttctc cgaagcgcca
     1381 gccatttaag accacccggt caccggcact aaaatttgcg ctttctgagc tttcaacaac
     1441 acctgaaaga tcaacacctg gcacatgcgg atagttgcgc agtagaccac cgagaccttt
     1501 cagtataaga ccatctttat aatttagcgt cgagtaatag accgccacaa cgacatcac
//
LOCUS       DASCNL010000335         1187 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000733193, whole genome shotgun sequence.
ACCESSION   DASCNL010000335 DASCNL010000000
VERSION     DASCNL010000335.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000733193"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1078
                     /locus_tag="QF359_04550"
     CDS             <1..1078
                     /locus_tag="QF359_04550"
                     /inference="COORDINATES: protein motif:HMM:NF015983.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HJO86209.1"
                     /translation="DLDELAQHAVNLGLMTVIGTNGMMLTDDRVARLKGVGVAGVGIS
                     LDSLDPNYHDKFRGIPGAWEKTMAGIDACRKGSLAHQLHFSVTDDNAGELDEMIAFAR
                     SSGALVLNIFFLVCTGRGEKVTNISQATYEAVLRKVTQAAHDESELLIRAKCAPHFKR
                     MAMELDPEWPITLAQGYEAGGCLAGSRYCRVTPEGSVTACPYIEDSVGSIRKQSFAQI
                     WQDAPMFKALRQPVLEGRCGECEYSMLCGGCRARPLARDNNLMGEDFLCGYEPAGGAV
                     IQPFPEQQNALMWTGDAEARLTKIPSFLRRIIRRRAEDYVRGEGRSQVTADDLHFLAA
                     KKFGGSMPFKPNLKGKTEAGRDDS"
     gene            1068..>1187
                     /locus_tag="QF359_04555"
     CDS             1068..>1187
                     /locus_tag="QF359_04555"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013086.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO86210.1"
                     /translation="MTVDVAIIGGGISGLATAYNLAGKGLDVVVLERQVHAGGN"
BASE COUNT          249 a          290 c          356 g          292 t
ORIGIN      
        1 tgatttggat gagctcgccc agcatgccgt caatcttggt ctgatgacgg tgattggtac
       61 caatggcatg atgttgacgg acgaccgagt tgcccggctt aaaggtgtcg gtgttgctgg
      121 tgtcggtatt agcctcgatt ctctggatcc caactatcac gataaatttc gcggtatccc
      181 tggtgcttgg gaaaaaacca tggctgggat cgatgcctgt cgtaaaggca gtttggcaca
      241 tcaactacat ttctcggtta ccgatgataa tgccggtgag ttggatgaaa tgatcgcctt
      301 tgcccggtcc tccggcgcac tggtgttgaa tattttcttt ttggtttgca ccgggcgcgg
      361 tgaaaaagtc accaatattt ctcaagcgac ttatgaagct gttctgcgca aagtcaccca
      421 agccgcccat gacgagtccg agttgctgat ccgggccaaa tgcgctccgc atttcaaacg
      481 catggcgatg gagcttgatc ctgaatggcc gatcactctg gcacaaggtt acgaagcagg
      541 cgggtgtttg gctggatcgc gctattgccg ggtaacgccc gaaggaagtg tcacagcctg
      601 tccttatatt gaggatagtg tcggctctat ccgcaagcag agttttgccc aaatctggca
      661 ggacgcgccg atgttcaaag cgctgcgcca gccggttcta gaaggccgct gcggtgaatg
      721 tgaatacagc atgctttgtg gtggctgccg ggcccggcct ttggcgcggg ataataattt
      781 gatgggtgaa gatttcctct gcggctatga gccggccggc ggtgccgtca tccagccatt
      841 tcccgaacaa caaaatgcgc tgatgtggac cggtgatgct gaagctaggc tgactaaaat
      901 tccgagcttt ttgcgtcgca taatccggcg ccgggctgaa gattatgtcc gcggcgaagg
      961 ccgcagccaa gtgaccgccg atgatctgca ttttctggcg gctaagaaat ttggcggctc
     1021 gatgccgttt aagccaaacc tcaaaggtaa gacggaggct gggcgcgatg acagttgatg
     1081 tagccatcat cggcggcggt atttccggtc tggcgactgc ttataatctg gccgggaaag
     1141 ggttggacgt cgttgtactt gagcgtcaag tgcacgccgg tggcaac
//
LOCUS       DASCNL010000336         3395 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000733232, whole genome shotgun sequence.
ACCESSION   DASCNL010000336 DASCNL010000000
VERSION     DASCNL010000336.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000733232"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            203..1315
                     /gene="cobD"
                     /locus_tag="QF359_04560"
     CDS             203..1315
                     /gene="cobD"
                     /locus_tag="QF359_04560"
                     /EC_number="4.1.1.81"
                     /inference="COORDINATES: protein motif:HMM:TIGR01140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0048472 - threonine-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase CobD"
                     /protein_id="HJO86211.1"
                     /translation="MGNRFFTAFFFHNTDSLKGLLSEALKTCYDGVMFDDTKLRKTPL
                     HGGDLTAAAQEFGVAEADLIDLSTGINPSLYRHIEVSERALRMLPTPGDVKNLLAAAQ
                     EFYRAPASSSIIAAPGTQAVLQNLPLLYPGRDVAILSPTYSEHSHTWESAGNTVTPVS
                     EFDDLSQGDIAVLVNPNNPDGRRYQPDDILKLAEDVELFIIDEAFCDASPELSLVPHL
                     KGQNILVLRSLGKFFGLAGLRLGFLIGASDITTVLSDRLGPWAVSGPAIEIGARALAD
                     DIWIAETVSDLAVKATRLNDLLQACGLSIAGGAELFTLIETGQAQAIYQGLGRAGVLV
                     RRFEDLPNWLRIGLPGADREWEKLATALSAIDNMGE"
     gene            complement(1286..2617)
                     /locus_tag="QF359_04565"
     CDS             complement(1286..2617)
                     /locus_tag="QF359_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HJO86212.1"
                     /translation="MNNTLAGGLIIAAPASGSGKTVITLSLLRAFKNAGVDAGSFKIG
                     PDYIDPAYHAAASGKLCRNLDFWAMQEDTLLRQRTAGLEDVDIVITEGVMGLFDGATT
                     GKAKNSGSTADAANWLDWPVVLVVDAKSQGASAAALVEGFANHRDDIKIAGVIFNHIS
                     GENHERILREALAPNGIQCLGCIPRHASLDLPNRHLGLVQAKEMPKLDQWLDAAAAIV
                     KEHVDLAALKDLAAQSKVVLTLKETPSIPPLGRNTAIARDDAFAFCYDHVVESWRAAG
                     TEISFFSPLAGEAPDFVADSIYLPGGYPELHAENIAGNESFVSAMKMAAAKDAVIYGE
                     CGGFMVLGETLTGRDGKSHDMLGLLPVETSFAAPKLHLGYRQLSLLDDGPLGSTGAQF
                     RGHEFHYCEMTVMTGREALFNAQDAQGNSLPPLGCRSGSVMGSFAHIIDSA"
     gene            complement(2610..>3395)
                     /gene="cobA"
                     /locus_tag="QF359_04570"
     CDS             complement(2610..>3395)
                     /gene="cobA"
                     /locus_tag="QF359_04570"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HJO86213.1"
                     /translation="AMENLSIDLPEFEPGTVWIVGAGPGDPGLLSILAWHGIQQADVI
                     VYDALVGEGIIELAGENAEMEYAGKRGGKPSAKQHDITERLVGLAQENNRVLRLKGGD
                     PFVFGRGAEECFGLVEAEIPFRIVPGITAGVGGLAYAGIPMTTRGTNTAVTFITGHTA
                     GGTVPDDINWRALSDGSPALIFFMGTAHLSRIAEQLQEAGRPADEPVAVVAKATTPDQ
                     KVLVSTLANCTADLAASDLEPPALIVVGDVVNFREQLKWLPDE"
BASE COUNT          769 a          963 c          884 g          779 t
ORIGIN      
        1 atcaaccgca atttcaccaa actcattgac caatatcgcc cagttttcat ttgctggttt
       61 gcgggcgagc agagaccgga tggcggttgt tttgccaaca ccgaaaaaac cggtgaataa
      121 agttgtcggg acgttttgga tggtcactaa aaacctatat gttctgtttc atcagcttaa
      181 caaatagcgc gcgggccata taatgggcaa tcgcttcttc actgcatttt tcttccataa
      241 cacagattct ctaaaaggtc tgctgtctga agcgcttaag acttgttatg atggtgtcat
      301 gtttgacgat acaaagcttc ggaaaacgcc gcttcatggt ggtgacctga cggcagcggc
      361 ccaggaattt ggcgtcgctg aagcggattt aatcgatctt tcgactggca ttaatccttc
      421 gctctaccgt catatcgagg tgagtgagcg tgccttgcgt atgctgccga cgccgggtga
      481 tgtgaagaat ttgctggccg ctgctcaaga gttttatcgc gcacctgcca gcagttcgat
      541 catcgccgca ccgggtaccc aagcggtctt gcagaattta ccgctgcttt atccgggccg
      601 ggacgtcgct attttatcac caacctatag cgagcacagt catacctggg agagcgccgg
      661 caatacggtg acgcccgttt ctgaattcga tgatcttagc caaggtgata tcgcggtact
      721 cgtcaatccc aacaatcctg atggacggcg ttatcagccg gatgatattc ttaaacttgc
      781 cgaagatgtc gaactgttca tcatcgacga agctttttgc gacgcctcgc ccgaactcag
      841 cctcgtgccg catttgaagg ggcaaaatat tctggtcctg cgctcgctgg gtaagttctt
      901 tggcctggcc ggcttgcgtc tggggttttt gattggtgca tctgacatta ccacggtact
      961 cagtgaccgc ttaggaccct gggcagtatc cggtccagcg attgagattg gcgcccgcgc
     1021 gctggctgat gatatttgga tcgctgagac ggtaagcgac ttggcggtta aggccacgcg
     1081 tttgaacgat ctgctgcaag cctgcgggct ttccattgcc ggtggtgcgg agttgttcac
     1141 gctgatcgaa accggacaag ctcaggcaat ctatcagggt cttggccggg cgggggtttt
     1201 ggttcggcgc tttgaagatc tgccgaactg gctcaggatt ggcctgcccg gcgccgatcg
     1261 cgagtgggaa aagctggcaa ctgcgctaag cgctatcgat aatatgggcg aatgagccca
     1321 ttaccgaacc ggatcggcag cccagcggtg gcaaggagtt tccctgggca tcttgcgcat
     1381 taaataaagc ttcgcggccg gtcatcaccg tcatttcaca gtagtgaaac tcgtggcctc
     1441 taaactgtgc gccggttgaa cccagcggtc cgtcatccaa taaagataat tgccgatagc
     1501 ccaaatgcag cttcggcgca gcaaaagatg tctcaaccgg caacagcccg agcatatcgt
     1561 gcgacttgcc gtcgcggccg gtgagggtct cgcccaagac cataaagccc ccgcattcac
     1621 cataaataac agcgtccttg gccgccgcca tcttcatcgc cgagacaaaa ctttcattgc
     1681 cggcgatgtt ttcggcatgc agctcaggat agccacccgg caaatagatg ctgtcagcga
     1741 caaaatccgg cgcttcaccg gcgagcggag aaaaaaaact aatctcggtg ccagctgccc
     1801 gccagctctc aacaacatga tcatagcaaa aggcaaaagc gtcatcccga gcaatcgccg
     1861 tattgcggcc aagcggtgga attgatggcg tctctttcaa cgtaagcacg actttcgact
     1921 gtgctgccaa atctttaagc gcggctagat caacatgttc cttgactatt gccgccgccg
     1981 catccagcca ttgatcgagc ttcggcattt ccttcgcctg cactagcccc aaatggcggt
     2041 tcggcagatc gaggctggca tggcggggta tacagccgag gcactgaata ccgtttggcg
     2101 ctaaggcttc gcgcagaatt cgctcgtgat tctcgccgct gatgtgattg aaaatcactc
     2161 cggctatttt gatatcatcc cgatgattgg cgaagccctc aaccagagct gccgccgagg
     2221 cgccttgaga tttggcatcc accaccagga ccaccggcca gtcgagccaa ttggcagcgt
     2281 ccgccgtact gccgctgttt ttagctttac ctgtggttgc gccatcaaac agtcccatca
     2341 ccccttcggt gataacgata tccacatcct ccaaacctgc cgtccgttgg cgcaataggg
     2401 tatcctcctg catcgcccaa aaatccagat tgcggcaaag cttacccgaa gccgccgcat
     2461 gataagccgg atcaatataa tcgggaccaa ttttaaagga accggcatca acacctgcat
     2521 ttttaaaggc gcgcagcagg ctcagggtaa tcactgtctt accgctgccg gacgccggtg
     2581 ccgcaattat caatcctcca gctaaggtat tattcatcag gcagccattt cagttgctca
     2641 cggaaattga cgacatcgcc aaccacaatc aaagcaggcg gctccaaatc agaggccgct
     2701 aaatctgctg tacaattagc caaggttgat accaacactt tttgatccgg tgttgtcgct
     2761 ttggcaacga cggcgacggg ctcatctgct ggccggccgg cttcctgcaa ttgctcggcg
     2821 attcggctca gatgtgcggt ccccataaaa aaaattaatg ccggcgagcc atcagaaagg
     2881 gcgcgccaat tgatatcatc cggcaccgtg ccgcccgcgg tatgcccggt aataaacgtc
     2941 accgccgtat tggtgcctcg cgtcgtcatt ggaattccgg cataagcgag cccgccaaca
     3001 cctgcggtga tgcccggcac gatgcgaaac ggaatttctg cttcgaccag cccaaagcat
     3061 tcctcggcgc cccggccgaa gacaaaggga tcgccaccct taagcctgag aactcggttg
     3121 ttttcttggg caagcccaac caaacgttcg gtaatatcgt gctgcttcgc ggatggcttg
     3181 ccgccgcgct tgcctgcata ttccatttcg gcgttttcgc cggccaattc gattatgcct
     3241 tcaccgacga gggcgtcata aacaatgacg tcagcctgct ggatgccatg ccaggcgagg
     3301 atcgacagca ggcccggatc accgggacca gcgccgacga tccacaccgt acccggttca
     3361 aattccggaa gatcaattga aaggttttcc atagc
//
LOCUS       DASCNL010000337         2456 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000733680, whole genome shotgun sequence.
ACCESSION   DASCNL010000337 DASCNL010000000
VERSION     DASCNL010000337.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000733680"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2040)
                     /locus_tag="QF359_04575"
     CDS             complement(<1..2040)
                     /locus_tag="QF359_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HJO86214.1"
                     /translation="MDQAPPSSPEVRLPNAPVLIANHREAALLTTDGELITLDKQLAI
                     RQAQDTPPILCHAKATARYLQTQDFPAFDLLELFAFVRPAQFAVPTPRGLADAFSLPR
                     PDTAEKATETLLTVAQTLLSNLLKLDSREQTPTHALAWGMARAGWAWGPAVLGVLEAS
                     KPKRQPNNAFEGFKVWNHLSEWEEGAPEPPAGHLPVGATEITDRLERLLGSDSEERPE
                     QTEYAIATADAFAPAENTGAPTTVIAEAGTGVGKTLGYIAPASVWAEKNEGPVWISTY
                     TRNLQRQLDGELDRLYPDPIEKTLRAVTRKGRENYLCLLNLEESISQGSANQSAGSPN
                     IDLITLGLVARWVQTSRDGDMIGGDFPAWLLDLMGRRRTIDLTDTRGECVYSACSHYG
                     KCFIEKSVRRARRARLVIANHALVMIQAVLGSDDIHRPTRYVFDEGHHLFDAADSAFS
                     AHLTGIEASDLRRWIMGAEGRRSSRARGLQARIEDLISDNDEAMAALSNTLSTARMLP
                     NQGWQERIAGGNPHGPSETFLDLARSQVYARDKNAKGPYDLETPTHPPAKNLVEAAKE
                     LADALAELSRPVKKLVKILTDKLDDEADELDTSTRQRVEAIARSLDRRCIHQVTAWRN
                     MLENLADDTPEDFVDFLSVERYQGRDYDTGLHRHFVDPTKPFAEQVLGASHGALIT"
     gene            2155..>2456
                     /gene="lysK"
                     /locus_tag="QF359_04580"
     CDS             2155..>2456
                     /gene="lysK"
                     /locus_tag="QF359_04580"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090444.1"
                     /note="class I; LysRS1; catalyzes a two-step reaction,
                     first charging a lysine molecule by linking its carboxyl
                     group to the alpha-phosphate of ATP, followed by transfer
                     of the aminoacyl-adenylate to its tRNA; in Methanosarcina
                     barkeri this enzyme charges both tRNA molecules for lysine
                     that exist in this organism (but the tRNALysUUU very
                     poorly) and in the presence of LysRS2 can charge tRNAPyl
                     with lysine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HJO86215.1"
                     /translation="MPDTQELSAEIKELAGDAKAWPFQEARALLKRLKDTCPDKGYVL
                     FETGYGPSGLPHIGTFGEVARTTMVRQAFSVLSDMPTKLIAFSDDMDGLRSVPDNIP"
BASE COUNT          538 a          660 c          677 g          581 t
ORIGIN      
        1 ggtgataagc gcgccatggg aagcacctaa tacttgttca gcaaacggtt tggtggggtc
       61 aacaaaatgc cggtgtagtc cggtatcata atctcggcct tggtagcgtt caacgctaag
      121 gaaatcgaca aaatcttccg gcgtatcatc ggcaaggttt tcaagcatat tccgccacgc
      181 cgtcacttga tggatacagc gccggtcgag actgcgtgct atcgcttcga cacgctggcg
      241 ggttgatgta tccagctcat ccgcttcatc atccagctta tcggttagaa ttttcaccag
      301 ttttttgacc ggccgggata attcagctag cgcatcggcc agttctttag cggcttcaac
      361 cagatttttc gctggtgggt gggtgggtgt ttccagatca taagggcctt tagcgttttt
      421 atcgcgggca taaacctggc tgcgggcgag atctaagaaa gtctcggatg ggccgtgcgg
      481 attgccgccg gcaatgcgtt cctgccagcc ttgattaggt agcatccgag ctgtcgacaa
      541 ggtgttcgac aaagctgcca tcgcctcatc attatctgaa atgagatctt cgatgcgggc
      601 ttgcaggcca cgcgcccggg aagaacgtcg accttctgct cccataatcc agcggcggag
      661 atcagaagcc tcaatacctg tcaggtgggc ggagaaagcg ctatcagctg catcaaatag
      721 gtggtgtcct tcatcaaaga catagcgggt tggccgatgg atgtcatctg atccaagcac
      781 ggcttggatc atcaccagcg catgattggc aatcaccaga cgcgctcgtc tggctcggcg
      841 aacggatttt tcaataaagc atttgccgta atgactacag gcggaataga cacattcgcc
      901 gcgggtatcg gtgagatcaa tggttcgccg ccgtcccatt aaatccaaca gccaggccgg
      961 aaaatcaccg ccgatcatgt caccgtcccg gctcgtttgc acccagcggg caaccagacc
     1021 gagggtgatt agatcgatgt tcgggctgcc ggcgctttga ttggcagatc cctggctgat
     1081 cgattcttct aaattcaaca agcagagata gttctcccgg cctttgcggg taactgcacg
     1141 cagcgttttt tcgatcgggt ccggatacag gcggtcaagc tcaccatcca attgccgttg
     1201 caggtttcgc gtataggtcg atatccacac cggtccttcg tttttttcag cccagacgct
     1261 ggctggtgca atatagccga gagttttacc gactccggtg ccggcctcgg cgataaccgt
     1321 agtgggtgcg cctgtattct cggctggggc aaaagcatct gcggtggcga tagcgtattc
     1381 tgtttgctcg gggcgttctt cggagtctga ccctaacagg cgctcaaggc gatcggtgat
     1441 ctcggtggca ccaaccggca gatgacccgc aggtggctca ggcgcacctt cttcccattc
     1501 agacaagtgg ttccacactt taaatccctc aaaggcatta ttcggttggc gcttgggttt
     1561 gctcgcctcc aacacgccca aaaccgccgg cccccaggcc cagcccgccc gcgccatacc
     1621 ccaggccaaa gcatgggttg gagtttgctc ccggctgtcg agcttcaaga gattgctcaa
     1681 caatgtctgc gctacggtca acagggtttc ggtggctttt tctgccgtgt cggggcgagg
     1741 caagctaaac gcatcggcga ggccgcgcgg cgtcggcaca gcgaattgag ccgggcgcac
     1801 aaaggcgaat aactcaagca aatcaaaggc gggaaaatcc tgagtctgca aatagcgtgc
     1861 agtcgctttg gcatggcata aaattggcgg cgtatcctgc gcctgccgga tggctagctg
     1921 tttatccaag gtgatcaatt caccatctgt cgtcaacagt gccgcttcgc gatgattggc
     1981 gatcagtacc ggcgcattag gcagtcttac ttcgggagag gagggcggtg cttgatccat
     2041 acacctatat tacccagtga tctttaatgg caccaacaaa gtttcgataa ttagcgttga
     2101 cgagagttgt ttacacttct agtttccgct ctcctttaaa gattgttgaa agaaatgccg
     2161 gatacccaag aacttagcgc tgaaataaaa gaactggctg gcgatgccaa agcctggccg
     2221 tttcaagaag cgcgcgccct gttaaagcgg ctcaaggaca catgtcctga taaaggctat
     2281 gtcttattcg aaaccggtta tggcccatca ggcctgccgc atatcggcac ttttggcgag
     2341 gttgcccgga caacgatggt gcgtcaggct ttttcagtgc tcagcgacat gccgaccaag
     2401 ctcattgcgt tttcggacga tatggatggc cttcgcagcg tgccggacaa tatccc
//
LOCUS       DASCNL010000338         3787 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000734060, whole genome shotgun sequence.
ACCESSION   DASCNL010000338 DASCNL010000000
VERSION     DASCNL010000338.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3787)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3787)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3787
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000734060"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..369)
                     /locus_tag="QF359_04585"
     CDS             complement(<1..369)
                     /locus_tag="QF359_04585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HJO86216.1"
                     /translation="MAEDNAANKKWRPATNLVRGGTNRSNFAETNEGIFMTSGYIYDT
                     AEQAQRAFQGEEDRFIYSRFSNPTVGMFEERMALLEGAVSCRATATGMAAVFASLAAS
                     VSAGDRLVSSKALFGSCDFVC"
     regulatory      complement(436..515)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            648..2081
                     /gene="tldD"
                     /locus_tag="QF359_04590"
     CDS             648..2081
                     /gene="tldD"
                     /locus_tag="QF359_04590"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HJO86217.1"
                     /translation="MTDIATTDNIFFNRSSMDQKRVEGIVEDALHGADDGELFLEYNQ
                     SESFVFDDGQLKNASFDTMQGFGLRAIAGETAGYSHASELSEEALKRANATVKAVHAG
                     HGGTMAAGPSPTNRSLYIDDNPLNLVPFETKVKLLSDIDTYARGLDDRIKQVSASLSG
                     EWQAVQILRADGSRAADIRPLVRLNVLVVTGEGDRMESGSYGTGGRETYETYLQPETW
                     QGAVDEALRQALVNLSSVPAPAGEMPVVLGPGWPAILLHEAIGHGLEGDFNRKKTSAF
                     AELMGNRVAAPGVTIVDDGTIEDRRGSLSIDDEGTPAQRTVLIEDGILTGYMQDRMNA
                     HLMDVPSTGNGRRQSYAHAPIPRMTNTVMENGAHEPEEIIKAVDKGLYAVNFGGGQVD
                     ITSGKFVFTCTEAYQIENGKLGAAVKGATLIGSGPEALKTVSMIGNDMALDPGVGTCG
                     KDSQGVPVGVGQPTMLLDELTVGGTEV"
     gene            complement(2078..2800)
                     /locus_tag="QF359_04595"
     CDS             complement(2078..2800)
                     /locus_tag="QF359_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HJO86218.1"
                     /translation="MYSEVIAELAPSGILRAGINLANIFLVTGKSEDGGPEGVSPDIA
                     RAIANQLGVKVSYVPCETPGGTAEAVKNEACDIAMIAYEPARAEFISFTDPYVKIEAT
                     YAVPGESSFQTVEDVDQSGVRIAVSETSAYDLFLTRSLKQAELHRAEGLLAAVDLFAN
                     EKLDALAGLRPALNQNIEKLPGTRILDGQFMTVEQAIGTQLKNLAAADFLQDFVKEAK
                     TSGLIEELINRHGVVDKLQMAS"
     gene            complement(2813..3139)
                     /locus_tag="QF359_04600"
     CDS             complement(2813..3139)
                     /locus_tag="QF359_04600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86219.1"
                     /translation="MTTKSVFVLLTSALSIIAGGPVQADAIDGTWCHKGQRVKIEGPI
                     IITPSGKRVEGEYDRHEFSYKIPAGEKYAGETVDFVVQHDTLAHKTRSGSSQFEEWEP
                     CPAPTS"
     gene            complement(3186..>3787)
                     /locus_tag="QF359_04605"
     CDS             complement(3186..>3787)
                     /locus_tag="QF359_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HJO86220.1"
                     /translation="DYMLDMPMYFVYRDGQYIDASGRSFRDFMAGKLPALPGETPSIK
                     DWEDHLTTAFPEVRLKKFIEMRGADGGPSKNLCALPAFWVGLLYDDQALADVTSMISD
                     WSYDEVSALRDEVPIAALKTPFRGSTLQDLAKDVLAIAKQGLKRRAKLDGSGQDETIF
                     LNPLHAIAESGITPAEELLAHFDGDWAGSVDPVFTEYAY"
BASE COUNT          934 a          997 c          969 g          887 t
ORIGIN      
        1 acagacaaaa tcgcaagaac caaacaacgc cttggaagaa accagccggt caccagcaga
       61 aacgctggcg gcgagcgagg caaaaaccgc cgccatgccg gttgccgtcg cccggcacga
      121 taccgcccct tcaagcagcg ccatccgttc ttcaaacatg ccgacagtcg ggttagaaaa
      181 gcgtgaatag ataaaacggt cttcctctcc ctgaaaggcg cgctgcgctt gttcggcagt
      241 gtcgtaaata tagccggacg tcatgaagat gccttcattg gtctcagcaa aatttgatcg
      301 gtttgtgccg ccgcgcacca aattggtcgc gggccgccat ttcttgtttg ctgcgttatc
      361 ttcagccatt ttaagtctcc taattttccg cagccgaaga ttttataaaa aaatccccag
      421 ccaaatctgg tcggggcttc taacgcgccg accttttagc tctatttatt taacgtggcc
      481 gcaagccggt cgtacaaatc accacgtaac tgagtgtaca atactcaggt tttatatctc
      541 gtcaaggggc gatctaatct tgaacaaaat agtgatgacc gtaccgcttg cctggctggg
      601 tcaactcact tatgactttg gaagaatttt aaacaggaca agtgttcatg accgatatcg
      661 ccaccactga caacattttc tttaaccgct ccagcatgga tcaaaaacgt gtcgagggta
      721 ttgtcgagga tgccctgcac ggcgctgacg acggtgaatt gtttctcgaa tacaatcaat
      781 cggaaagctt tgtgtttgat gacggccagc ttaaaaacgc cagctttgat accatgcaag
      841 gctttggtct ccgcgccatc gctggtgaga ctgccggcta tagtcacgcc tcagaactta
      901 gcgaagaggc gttgaaacgc gccaatgcca cagtcaaagc agttcatgcc ggtcatggcg
      961 gcaccatggc ggcaggcccg tcgccgacca atcgcagtct ttatatcgat gacaatccgc
     1021 taaatttggt gccgtttgaa accaaggtaa aactattatc ggatattgat acttatgcac
     1081 ggggtcttga tgaccgtatc aaacaggttt ccgcctcgct ctccggcgaa tggcaggcag
     1141 tgcaaatcct ccgcgccgat ggcagccggg ccgccgatat ccgcccgctg gtccggctta
     1201 atgttttggt ggtgaccggt gaaggagacc gcatggaatc gggtagttat ggcactggtg
     1261 gccgcgaaac ttatgaaacc tacctccagc cagaaacctg gcagggggcg gtcgatgaag
     1321 cgctccgcca agccctggtt aatttaagca gcgtacctgc gccagcgggt gaaatgccgg
     1381 tggttttagg cccgggctgg ccggcaatat tgttgcacga agccattggc catggcctgg
     1441 aaggtgattt taaccgcaag aaaacctcgg cttttgctga actgatgggt aatcgcgttg
     1501 ccgcgcccgg tgtcacaatc gttgatgacg gcaccatcga agaccgccgg ggctcgctct
     1561 cgattgatga tgaaggtaca cccgcgcagc gcaccgtgct gatcgaagac ggcattctca
     1621 ccggctatat gcaggaccgc atgaacgcgc atctgatgga tgtgccctcg accggtaacg
     1681 ggcggcggca aagctatgcc catgcgccga taccgaggat gaccaacacc gtgatggaaa
     1741 acggcgcgca cgaaccggaa gaaatcatca aagcggtgga taaaggtctt tatgcggtta
     1801 atttcggtgg cggtcaggtc gatatcacat cgggcaaatt tgtctttacc tgcaccgaag
     1861 cctaccaaat tgaaaacggc aagctcggcg ctgcggtgaa aggcgcgacg ctcatcggca
     1921 gtggcccgga ggcgctaaaa accgtttcaa tgatcggcaa tgatatggcg cttgatccgg
     1981 gtgtcggcac ttgcggtaaa gatagccagg gtgtgccggt cggcgtcggc cagccgacca
     2041 tgttgctgga cgagctgacg gtcggcggca cggaagttta agaagccatt tgaagtttat
     2101 caactacgcc gtgacggttg atcaattctt cgattaaacc gcttgtctta gcttctttga
     2161 caaaatcttg caaaaaatcg gcggcagcta aattcttaag ctgagtgcca atagcttgtt
     2221 ctaccgtcat aaattggcca tcgagaatac gggttcctgg cagtttttcg atattctgat
     2281 ttaacgccgg ccgaagacct gccaacgcat ccagcttttc attggcaaac agatcaacgg
     2341 ctgccagcaa tccctcggcg cggtgaagtt cagcttgttt taaactgcgg gtgagaaaca
     2401 gatcataggc actggtctcc gatacggcga tgcgcacgcc ggattgatct acgtcctcga
     2461 ccgtttgaaa cgatgactca ccgggcacag cataagttgc ttcgattttg acataaggat
     2521 cggtaaatga aataaattca gcccgtgccg gttcgtaggc tatcatggcg atgtcgcaag
     2581 cttcattttt taccgcctcg gccgtgccac ccggggtctc gcaggggaca taagaaacct
     2641 tgacccccaa ttggttagca attgcacggg caatatcagg tgatacgcct tccggaccgc
     2701 catcttcaga tttacccgtc accagaaaaa tattggctaa atttatgccc gcccgaagga
     2761 tgccggaagg cgccaattct gcaatgactt cagaatacat tttgattaat tcctaactcg
     2821 ttggtgcggg acaaggttcc cattcttcaa actgagaact gccggatctg gtcttgtgcg
     2881 ccaaggtatc atgctggaca acaaaatcga cggtctcgcc agcatatttc tcacccgccg
     2941 gaattttgta agaaaattcg tggcgatcgt actcgccctc cacccgctta ccactgggtg
     3001 tgataataat cgggccctca attttgaccc gctggccttt gtggcaccag gtgccgtcga
     3061 ttgcatccgc ttgaactggg ccaccggcaa ttattgataa agcggatgtt aataaaacaa
     3121 aaactgattt ggtggtcaca atttcagttc ctccaaataa ttttattggc aattaatgac
     3181 tttaattaat aggcatattc cgtgaaaacc ggatcgacac tgccggccca atcgccgtcg
     3241 aaatgagcca gtaattcttc ggccggtgtg atcccgcttt cagcaatggc atgcagcgga
     3301 ttgaggaaaa tagtttcatc ctgtccagag ccatcaagtt ttgctcggcg tttaagacct
     3361 tgcttggcaa ttgccagcac atccttggct aaatcctgca gcgtactgcc tcgaaacggt
     3421 gttttaaggg ccgcgatcgg tacttcatcg cgaagcgccg aaacttcgtc ataggaccaa
     3481 tcgctgatca ttgaagtaac atctgcgagc gcctgatcat catagagcag cccaacccaa
     3541 aacgccggca gcgcacagag atttttggat ggcccgccat cggcgccgcg catttcaata
     3601 aatttcttga gccgcacttc cggaaaagcc gtggtcagat gatcttccca gtctttgata
     3661 ctaggtgttt cgccgggcag cgctggcagt ttacccgcca tgaaatcccg gaaagaccga
     3721 ccggacgcat caatatattg gccgtcccgg taaacaaaat acattggcat atcgagcatg
     3781 taatcaa
//
LOCUS       DASCNL010000339         1556 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000734536, whole genome shotgun sequence.
ACCESSION   DASCNL010000339 DASCNL010000000
VERSION     DASCNL010000339.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000734536"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1355)
                     /locus_tag="QF359_04610"
     CDS             complement(<1..1355)
                     /locus_tag="QF359_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase N-terminal
                     domain-containing protein"
                     /protein_id="HJO86221.1"
                     /translation="MRILGISALYHDSAAALIDDGEILAAAQEERFTRVKHDARFPEN
                     AIAYCLAAAGTNMSEIDLAAFYDKPFLKFERLLETYVSFAPKGFKSFRVAMPIWLREK
                     LFQKDLLRKEFKKFDADFDWQNKLLFAEHHQSHAASAFYPSPFEEALVLTMDGVGEWA
                     TTSVAIGAGNKLNVTKELHFPHSLGLLYSAFTYYTGFKVNSGEYKVMGLAPYGEPKYA
                     QTILDNIIDLKADGSFRLDQSYFDYCTGLKMTNDKFNNLFGGPPSKSEGWLTDKEMDL
                     AASIQAVTEEIVQRLTRSLAQETGAKNLCLAGGVALNCVANGKVLRDGAFENIWIQPA
                     AGDAGGALGAALCAYHHFQDKPRRTNNTDSMKGSYLGPEFSDLEIQRRLTAAGANFAT
                     LDVDSIIDKTAQALADGKSIGWFQGRMEFGPRALGGRSILGDPRSPEMQKTLNLKIKY
                     R"
     gene            complement(1369..1518)
                     /locus_tag="QF359_04615"
     CDS             complement(1369..1518)
                     /locus_tag="QF359_04615"
                     /inference="COORDINATES: protein motif:HMM:NF039953.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HJO86222.1"
                     /translation="MGFLFELWSFLRVRKKFWLLPIIAMMTIFGGLIVLSQGSAVAPF
                     IYTIF"
BASE COUNT          427 a          369 c          361 g          399 t
ORIGIN      
        1 tctcgatatt taatcttgag attcaatgtt ttttgcattt ccggtgagcg gggatcgccc
       61 aggattgagc gaccacccaa ggcgcgcggg ccaaactcca tccgaccctg aaaccagccg
      121 atcgatttgc cgtctgcgag agcttgagcg gttttgtcga taatactgtc gacgtctaaa
      181 gttgcaaaat ttgcgccggc cgcggttagg cgccgctgaa tttcaagatc agagaattcc
      241 ggaccgaggt aagaaccctt catactatcc gtattatttg tacggcgtgg cttatcctgg
      301 aaatgatgat aagcacaaag tgcggcaccc aaagcgccgc cagcatcacc tgccgccggc
      361 tggatccaga tattttcaaa ggctccgtcc cgcagaactt tgccattggc aacacaattg
      421 agggcaacgc caccggccag acagagattt tttgcacccg tttcttgagc caaagagcga
      481 gtaaggcgct gtacaatttc ctcagtcact gcttgaattg aagccgcgag atccatttcc
      541 ttatcggtta gccagccttc ggattttgac ggcggcccgc caaataagtt gttgaattta
      601 tcatttgtca tctttaggcc ggtacagtaa tcaaaatagg attgatccag tcggaacgag
      661 ccgtcggctt taagatcgat tatattgtcg aggatagtct gggcgtattt cggttcacca
      721 tagggtgcca agcccatcac tttgtattcg cccgaattaa ctttaaagcc agtataatag
      781 gtgaatgccg aatagagcag acctaaagaa tgcgggaaat ggagctcctt ggtcacatta
      841 agtttgttcc cggcgccgat ggcgaccgag gttgttgccc attcgccgac gccatccatg
      901 gtaagcacta gagcctcctc aaaaggcgaa gggtaaaagg cgctcgctgc atggctttga
      961 tggtgctcag caaacaacag cttgttctgc caatcaaagt ccgcatcgaa ttttttaaac
     1021 tcttttctga gcaaatcttt ttgaaacagc ttttcccgga gccagatcgg catcgcgaca
     1081 cggaaagatt taaagccttt gggagcgaat gaaacgtacg tttcgaggag gcgttcaaac
     1141 tttaaaaacg gtttgtcgta gaaggcagct aaatcaatct cgctcatatt tgttccggcg
     1201 gctgccaaac aataggcaat tgcattttct ggaaaacgcg catcatgctt aactctagta
     1261 aatcgctctt cctgagcagc tgcaaggatt tcgccgtcgt cgatgagagc cgctgcgctg
     1321 tcatgataaa gtgctgatat gcctaaaata cgcaatttat aaatatcttt aaaaaattgt
     1381 ataaataaat ggtgccacgg cagagccctg gctcaaaaca atgaggccac caaagatcgt
     1441 catcatggca atgatcggta agagccaaaa ctttttgcga actcttaaaa atgaccaaag
     1501 ttcaaaaaga aagcccatat tatgttttcc taaatttaaa taacttcaaa attgac
//
LOCUS       DASCNL010000340         1318 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000735925, whole genome shotgun sequence.
ACCESSION   DASCNL010000340 DASCNL010000000
VERSION     DASCNL010000340.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000735925"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="QF359_04620"
     CDS             <1..311
                     /locus_tag="QF359_04620"
                     /inference="COORDINATES: protein motif:HMM:NF024578.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HJO86223.1"
                     /translation="ELKITDLGISVGNLNANTRKRFNLKKKSKGVVVVDVDKDGVATE
                     KGVKVGDVIVEVSQNEVASPKEVKKRIEDAKSLGRKSVLLLIEGQAGLRFVALRLTKK
                     "
     gene            472..>1318
                     /locus_tag="QF359_04625"
     CDS             472..>1318
                     /locus_tag="QF359_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrpB-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HJO86224.1"
                     /translation="MSDTIKYILDEDRMPKNWYNIAADLPEPLAPVIHPGTGQPIGPE
                     DLAPLFPMALIMQEVSAEREIEIPEPVRDVYRQWRPSPLMRARRLEKALDTPARIFYK
                     YEGVSPAGSHKPNTAIAQAFYNKEEGVRRLTTETGAGQWGSSLAFAGSLFDLEVDVYM
                     VKVSYQQKPYRRALMETYGARCVASPSEETNSGRAILEQDPDSTGSLGIAISEAVEIA
                     ATNDDTKYSLGSVLNHVLTHQTIIGQEAIMQLEMADDYPDIVIGCAGGGSNFSGLAFP
                     FLGEQF"
BASE COUNT          359 a          284 c          339 g          336 t
ORIGIN      
        1 aagagttgaa gataaccgac ttaggtatta gcgttggtaa tctgaacgcc aacacgcgca
       61 agcgctttaa tctcaagaaa aaatcaaaag gcgtggttgt tgttgatgtc gacaaagatg
      121 gcgtggcgac tgaaaaaggg gtcaaagtcg gcgacgtcat tgttgaagtg agccaaaacg
      181 aagtcgcgtc gccgaaagag gtaaaaaaga gaattgaaga tgccaagtcc ttggggcgaa
      241 aatcggtgtt acttctgatc gaggggcaag cgggattgcg ctttgtcgcg ctgcgtctca
      301 ccaagaaata atctgcaatt tttttaatgc gaagaaacgg caccttcggg tgccgttttt
      361 tttgattaag atcaaggact ggtattttag ggagaattaa tatttaatca gttataattt
      421 caaataaaat taatcacaat ctcatataaa ttaagggagg ttattccaaa catgagtgac
      481 actataaaat acatcttaga cgaagatagg atgccaaaaa attggtacaa tattgctgcc
      541 gatttaccgg agccactggc gccggttata catccaggaa ccggccagcc gattgggcct
      601 gaggatctcg cgccgttatt tccaatggct cttatcatgc aggaagtcag tgccgaacgg
      661 gaaattgaaa tccctgaacc ggtgcgtgat gtttatcgcc aatggcggcc atcgccatta
      721 atgcgggctc gtcgtttaga gaaagctctc gatacgccag cgcggatttt ttacaaatat
      781 gaaggcgtga gcccggccgg cagccataag ccaaatacag ccattgccca agctttctac
      841 aataaagaag aaggcgtccg tcgtctcact acagagaccg gtgcaggcca atggggatct
      901 tcgcttgcct ttgccggctc attgttcgat ctcgaagtcg acgtttatat ggtgaaagtt
      961 agttatcaac agaaaccgta tcgccgggct ttgatggaaa cttatggcgc gcgttgtgta
     1021 gcttcgccta gtgaggaaac caattcaggc cgcgctattc ttgagcaaga cccggattct
     1081 actggaagtc tcggtattgc gatttctgaa gcggtcgaga ttgctgcgac caatgacgac
     1141 actaaatatt cgctcggtag tgtgcttaac catgtgttga cccatcagac tattattggt
     1201 caagaagcca tcatgcagct cgaaatggcg gatgattatc cggatatcgt gatcggttgt
     1261 gccggcggcg gcagtaactt ttccggtctc gcctttccgt tcctcggtga gcaattcc
//
LOCUS       DASCNL010000341         1099 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000736142, whole genome shotgun sequence.
ACCESSION   DASCNL010000341 DASCNL010000000
VERSION     DASCNL010000341.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000736142"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(13..>1099)
                     /locus_tag="QF359_04630"
     CDS             complement(13..>1099)
                     /locus_tag="QF359_04630"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HJO86225.1"
                     /translation="LSPSMALGKGYMDGRISVDNGSIYDFLQLLALNVKQNDYHWLHR
                     FFDHLNALRKRFQQFNPERKSRENVAHHYDLSGKLYELFLDRDHQYSCAYFEKPGNNL
                     DTAQSDKKCHIAAKLLLERNHKVLDIGSGWGGMGLYIARHFGTQVDGITLSDEQFKVS
                     NQRAKSENLDDKAKFQLRDYRNLEDTYDRIVSVGMFEHVGVNHFKTYFNKIHDCLAKE
                     GVALLHTIGRIGHPSVTDPWIRKYIFPGGYIPSLSEILPVIENTGMVVSDIEFLGLHY
                     AETLRNWQQRFQANRDKVKDIYDETFCRMWEYYLACSEVSFRHLDSTVFQIQIVKDRH
                     VVPITRNYIAKEETVLREAMANDTRAA"
BASE COUNT          287 a          248 c          265 g          299 t
ORIGIN      
        1 tgccggaaag tttcaggcgg cgcgagtgtc gttggccatt gcctcgcgga gcaccgtttc
       61 ttctttcgct atgtagttcc gggttatcgg cacaacatgc cggtctttca ctatctgaat
      121 ttgaaagact gttgaatcca aatgacggaa ggaaacttca ctgcaggcca gataatattc
      181 ccacatgcgg caaaaagttt cgtcgtaaat atcttttacc ttgtcccgat tggcctgaaa
      241 gcgttgctgc cagttcctta gggtttcagc atagtgaaga ccaaggaact caatatccga
      301 taccaccatg ccggtgtttt cgatcaccgg caagatttcc gatagtgatg gaatatagcc
      361 acccgggaaa atatatttac ggatccaagg atcggtcacc gaggggtgac caatacggcc
      421 gatggtatga agcagggcga ccccttcttt cgccaggcaa tcatggattt tgttgaagta
      481 agttttgaag tgattgacgc cgacatgttc gaacataccg accgaaacaa tgcgatcata
      541 ggtatcctct aggttgcggt aatcgcggag ttggaatttg gccttatcat ccaggttttc
      601 cgattttgcc cgttgattcg atactttgaa ttgctcatca gaaagcgtaa tgccatccac
      661 ttgggtgcca aaatggcggg ctatatacag ccccatgccg ccccagccag agccaatatc
      721 taatactttg tggttgcgct ctaacaatag tttagcagcg atgtggcatt ttttgtcgga
      781 ttgtgcggta tccagattat tccctggctt ttcgaaatag gcacatgagt attggtggtc
      841 acgatcaaga aataactcat aaagcttgcc agataaatcg taatgatggg cgacgttctc
      901 acgtgatttt cgctctggat tgaactgttg aaagcgcttt cgcaacgcat tcaaatgatc
      961 aaaaaaacga tggagccaat gatagtcgtt ttgtttgaca tttagcgcca ggagctgaag
     1021 aaaatcatag atcgagccat tgtcgacaga gatacgtcca tccatatagc ctttcccgag
     1081 cgccatacta ggagatagg
//
LOCUS       DASCNL010000342         1378 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000737683, whole genome shotgun sequence.
ACCESSION   DASCNL010000342 DASCNL010000000
VERSION     DASCNL010000342.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1378)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1378)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000737683"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /gene="ddpX"
                     /locus_tag="QF359_04635"
     CDS             <1..545
                     /gene="ddpX"
                     /locus_tag="QF359_04635"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016805 - dipeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HJO86226.1"
                     /translation="PESYGVELSLEYAMANNFTGKPVYTRAGCYLHPEAEGLLCTAIE
                     LAAELSFKIKIFDAFRPSEAQWVLWNHTPDPDFLADPRRGSPHSRGAAVDLTLVYQTG
                     PQAGQDLEMGTPFDAFTPRSHHGNMEVSIEAQRNRTLLMGLMTTAGWDFYQNEWWHYQ
                     LFDARRFPALSDSVLDQGMM"
     gene            567..>1378
                     /locus_tag="QF359_04640"
     CDS             567..>1378
                     /locus_tag="QF359_04640"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HJO86227.1"
                     /translation="MKSSIKALLLCSFIVGGAAALAASAAAESAAVILMYHRFGETKF
                     PSTNIQLKQFDNHIKELTNGTYNVLPVRDIMAAIQNGKDLPDRTVGITIDDGYRSIYT
                     EAWPRLRNARLPFTVFVATDPIDHGSNNYMSWDQIRELKKSGVDISGHTASHNHMPAS
                     NPERNKYELKKSKARMVAELGKAPEMFAYPFGEASEQVQKLVQKNGYNFAFGQHSGVV
                     NSTTNVNYIPRFALNENYDDMRRLRLVLNALPLSATNITPADPLLITNNPPN"
BASE COUNT          359 a          338 c          332 g          349 t
ORIGIN      
        1 cgccggaaag ttatggtgtt gaactttctc ttgaatacgc tatggccaat aattttaccg
       61 gtaaaccggt ttacacccgc gccgggtgct accttcaccc ggaagccgag ggcttattat
      121 gcaccgccat cgaattagcc gccgaactat ctttcaaaat aaaaatcttt gatgcctttc
      181 ggccctcaga ggctcagtgg gtattatgga atcacacccc tgatccggat tttctcgctg
      241 atccgagaag aggttcaccc cattctcggg gagccgctgt cgatttgacc ctggtttatc
      301 aaactgggcc tcaggcaggg caagatcttg aaatgggtac gccatttgat gcgtttacac
      361 cgcgctctca tcatgggaat atggaagtta gtattgaggc acagcgtaac cggactcttt
      421 tgatgggatt aatgactact gccggatggg atttctatca gaatgaatgg tggcactatc
      481 aattgtttga tgcgcgtaga tttcccgcgc tcagcgattc cgtgctggat caaggaatga
      541 tgtagggcaa gaatggagaa cggccagtga aatcatcaat aaaagctctc ttgctctgta
      601 gttttattgt gggcggcgcg gcggcgttgg cggcctcggc agcggccgaa agtgcggccg
      661 ttatattgat gtatcaccgt ttcggcgaaa ccaaattccc gtcgactaat atacagctta
      721 aacaattcga caatcatatc aaagagctta ccaacggtac ttacaacgtt ttaccggtgc
      781 gcgacattat ggccgcgatt caaaacggta aagacctgcc ggatcggacg gttggcatta
      841 ccatcgatga cggctaccgc tcaatctata ccgaagcctg gccacgcctt agaaatgcca
      901 gattgccgtt taccgtcttt gttgccaccg atccgattga ccacggctcg aataattaca
      961 tgagctggga tcaaattagg gaattaaaaa aatcaggtgt cgatattagt ggccacacgg
     1021 catcgcacaa tcatatgccg gcttcaaatc ccgagcgcaa caaatatgag ctgaaaaaat
     1081 cgaaagcgag gatggttgca gaactgggca aggcaccgga aatgtttgcc tatccctttg
     1141 gtgaagccag tgagcaagtt caaaaactgg tgcaaaagaa cggctacaat tttgcctttg
     1201 gtcagcattc tggtgtcgtc aattcaacaa ccaacgtcaa ttacattccc cgtttcgcct
     1261 tgaatgagaa ttatgatgat atgagacgcc tgcgtctggt gttaaacgcc ctgccgttgt
     1321 cggcaacaaa catcacgccc gccgatcctc tgcttattac caataatcct cccaattt
//
LOCUS       DASCNL010000343         1299 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000739245, whole genome shotgun sequence.
ACCESSION   DASCNL010000343 DASCNL010000000
VERSION     DASCNL010000343.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000739245"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="QF359_04645"
     CDS             complement(<1..245)
                     /locus_tag="QF359_04645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86228.1"
                     /translation="MDNTKILDEFHTVDLTTGWEVPEGYPPGIEQKILAGGLNEEAGT
                     GSQTRLLRIKAGVFTTEPFIHDYWEEVYVISGDLTMG"
     gene            complement(264..950)
                     /locus_tag="QF359_04650"
     CDS             complement(264..950)
                     /locus_tag="QF359_04650"
                     /inference="COORDINATES: protein motif:HMM:NF022463.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2848 domain-containing protein"
                     /protein_id="HJO86229.1"
                     /translation="MTVKIDLKLQLAGDEIDYVLDNIIIGGLTGIDVEAIEKHLDELA
                     EIGVTRPSSIPLFFRAAADMVSTADNIQVLGEDTSGEAEFVLLGTEDGMLVGVGSDHT
                     DRKVEAYSIAVSKQMCAKVIAPEVWRYDDVKDHFGQLNIRSWAFENGEKRLYQACTAA
                     DFLAPDDVLPQCCDGATTLPAGTLYYGGTGAAIGGVKPADRFEYEIEDPVLGRTISHG
                     YDVSPIPVAE"
     gene            complement(987..>1299)
                     /locus_tag="QF359_04655"
     CDS             complement(987..>1299)
                     /locus_tag="QF359_04655"
                     /inference="COORDINATES: protein motif:HMM:NF020119.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HJO86230.1"
                     /translation="PYEPFHPHLEAEPVEPGKIYEYAILLAPLSNVFKTGHRIKIVIS
                     SMDHARSRDYELAPESLGRTHAPWHLCSSMTTLHKVFHDEENPSHLLLPVIPAAAQTE
                     T"
BASE COUNT          302 a          343 c          323 g          331 t
ORIGIN      
        1 ctgcccatgg tgagatcgcc agaaataaca tagacttctt cccaatagtc gtggatgaag
       61 ggttcggtgg taaaaacgcc agccttgata cgtaacaacc gggtttggct gcccgttcca
      121 gcctcttcgt tgagccctcc agcaaggatc ttctgttcga tacccggagg ataaccttca
      181 gggacttccc agccggtggt cagatcgacg gtgtgaaatt cgtccagtat ttttgtatta
      241 tccattatgt gtctcctttt tatttattca gcaacaggaa taggcgaaac gtcataacca
      301 tgactgatgg tgcgccccag aaccgggtct tcaatctcat attcaaagcg gtcggccggt
      361 ttgacaccgc cgatcgccgc cccggtgccg ccgtaataga gcgtgccggc gggcaacgtc
      421 gtggcgccat cacagcattg cggcagcaca tcatccggcg ccaggaaatc ggccgcggtg
      481 catgcctgat agaggcgttt ttcgccgttt tcaaacgccc aggaacgtat gttcaactgg
      541 ccaaaatgat ctttaacgtc atcataacgc cacacttccg gcgctattac tttagcgcac
      601 atttgcttag acacggctat tgaataggct tcaactttac ggtccgtatg atctgatcca
      661 acgccgacca gcataccatc ttcggtgccg agcaatacaa actcggcttc gccgctggtg
      721 tcttcaccga gcacttgaat attatcggcg gtgctgacca tgtcggcggc agcgcgaaaa
      781 aacagcggga ttgaacttgg ccgggtgacg ccgatctcag cgagttcgtc cagatgcttt
      841 tcaatcgcct cgacatcaat gccggtcagg ccaccgataa tgatattgtc gagcacatag
      901 tcaatttcgt caccggcaag ttgcagtttt aaatctattt tcacagtcat ttcttttttc
      961 ctctttttat aacgtccgct ggtactttaa gtttcggtct gcgccgctgc cggaatgacc
     1021 ggtaacagca gatgtgatgg gttttcttca tcatgaaaga ctttgtgcag ggtcgtcatt
     1081 gagctgcaca aatgccacgg cgcatgggtg cggccaagcg attccggggc caattcataa
     1141 tcacgcgaac gcgcatgatc catcgacgaa ataacgattt tgatccggtg gcctgtttta
     1201 aagacattag aaagcggcgc cagtaaaatg gcatattcat agattttacc gggctccact
     1261 ggctctgctt caagatgcgg atgaaacggc tcatagggc
//
LOCUS       DASCNL010000344         1049 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000744324, whole genome shotgun sequence.
ACCESSION   DASCNL010000344 DASCNL010000000
VERSION     DASCNL010000344.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000744324"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="QF359_04660"
     CDS             <1..188
                     /locus_tag="QF359_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613921.1"
                     /note="catalyzes the interconversion of 2-phosphoglycerate
                     and 3-phosphoglycerate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HJO86231.1"
                     /translation="AHTLSPVPLILVNPPGFAQDLRAGVLADVSPTLLRLLNLDQPAE
                     MTGQSLISEKQTQDAPV"
     gene            175..>1049
                     /locus_tag="QF359_04665"
     CDS             175..>1049
                     /locus_tag="QF359_04665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86232.1"
                     /translation="MPRFSWHCLFSPLIVSASLYLSVPSLAQQKDNALDNQIKEVEKE
                     IEAGKKQSRQLKQQVDELKIDISKVSRDRIGVASVVQNLEQRLSKLETEIDDLNDAET
                     EKRKLLESRRDQFSGVLMALQKLSRLPPEAVIAYPTGAADLIRTAILLRSVVPQIEGQ
                     AVRLREDLIALAATRDLIAKRKFQLAKTSLEFKNKRSTLDGLIRMKAAEHERALSKRR
                     EAKLRIESLSGQAQNLRDLFGNLEQERKKQLSEKRKIKQKQLLEEKKVKSQRSTLTAK
                     KVVRLVPPLDLKPFV"
BASE COUNT          306 a          250 c          249 g          244 t
ORIGIN      
        1 cagcacatac gctgtcaccg gtgccgctga tcctggtgaa cccaccgggt tttgcccaag
       61 atttaagagc cggtgtttta gctgatgtct cgccgacatt gttgcggcta ttgaacttgg
      121 accaacccgc tgaaatgacc gggcagtcat tgatttcaga aaaacagact caagatgccc
      181 cggtttagtt ggcattgctt attctctcct ctcatcgtta gcgcctcatt atacctgtct
      241 gtcccaagcc tcgctcaaca aaaagacaat gctctcgaca accagatcaa ggaggttgaa
      301 aaagagattg aagccggaaa aaagcaaagc cggcagctga aacaacaagt tgatgaattg
      361 aaaattgata tttcgaaagt cagccgtgat cgcattggcg tcgcctctgt ggtgcaaaat
      421 cttgagcagc gtttgtcgaa gctcgaaact gaaatagatg atcttaatga tgcagaaaca
      481 gagaagcgta aattgctcga atcgcgtcgt gaccagttct ctggggtctt gatggcattg
      541 cagaaattat cgcgattgcc gccggaggcg gtcattgcct acccgacggg cgccgctgat
      601 ttgatccgga cggccattct cttgcgctcg gtcgtaccgc aaattgaagg ccaagcagtg
      661 cgacttcgcg aagatttgat cgcccttgct gcaacccgcg atttgatcgc taaacgtaaa
      721 tttcagctcg ccaaaaccag tctcgaattt aaaaataaac gctcaacctt ggatgggtta
      781 atccggatga aagcggccga gcatgaacgc gcgctatcta aacgccgtga agctaagctt
      841 agaatcgaga gcctcagcgg acaggcgcaa aacttgcgtg atttatttgg taatctcgaa
      901 caagaacgca aaaaacagct ttccgagaaa agaaaaataa agcaaaaaca actgcttgag
      961 gaaaaaaaag taaaatctca aagatccacc ttgacggcta aaaaagttgt ccgattggta
     1021 ccgccgctgg atctaaaacc ttttgtatt
//
LOCUS       DASCNL010000345         2178 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000744567, whole genome shotgun sequence.
ACCESSION   DASCNL010000345 DASCNL010000000
VERSION     DASCNL010000345.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000744567"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..710
                     /locus_tag="QF359_04670"
     CDS             <1..710
                     /locus_tag="QF359_04670"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HJO86233.1"
                     /translation="YTDVDGIYTTDPRIVSKAKKLDRITYEEMLEMASLGSKVLQTRS
                     VELAMNHKVRVQVRSSFEATPGTIVVSEDEIVEQQIVSGISQSKDEAKITLLKVADRP
                     GVAAAIFGPLAEAAINVDMIVQNISEDGKTTDLTFTVGTADLETAVSVIEKNQDDIGI
                     GKIIADSDVVKISVVGVGMRSHAGVAQKMFLTLAEFGINIKVISTSEIKVSVLVAEEY
                     GETAIRALHTAYGLDSD"
     gene            764..>2178
                     /locus_tag="QF359_04675"
     CDS             764..>2178
                     /locus_tag="QF359_04675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /protein_id="HJO86234.1"
                     /translation="MARIPTMTGSRRLLARLRDVMAGAGTAQERLDQLASIIATDFVA
                     EVCSVYVLRAGEVLELFAATGLAPEAVHNTRLSIGEGLIGRIAVQARPLALADAQSHP
                     DFAYRPETGEEIFQSLAGVPILRGGRVTGVLAVQNKTGRSYTEEEIETLETIAMVIAE
                     LIASSNLLSEEELHAVDGMSLVPVSIEGVRFNGGLAIGDAVRHERRIQILKLVADDPE
                     AEQQRLDRAVAEMHGAIDEMLEAKDVAEGGEHRDILETYKMFAEDAGWLARINEAIIN
                     GLTAEAAVEKVRNDTRARFRNQTDRYLRERLHDFDDLAHRLLQHLVGKTEVNETNNLP
                     ENIILVARNMGPAELLDYDRSCLRGLVLEEGSATTHVAIVARALDIPVVGKMPEILDK
                     VEPNDTVIVDGDNAEVHIRPADNIRQAFIDTLKARAQRMATYASLRDVPAETKDGIRV
                     ALHINAGLLADMQNMTETGADG"
BASE COUNT          547 a          540 c          613 g          478 t
ORIGIN      
        1 tctatacgga tgttgatggc atttatacca ccgatccccg gatcgtcagc aaagctaaaa
       61 aacttgatag gataacctat gaagaaatgc tggagatggc atcacttggc tcgaaggtct
      121 tgcagacccg ttcagtggag ctcgccatga atcacaaagt tcgggtgcag gtgcgctcaa
      181 gcttcgaggc aactcccggc actattgtcg taagcgagga tgaaattgtg gaacaacaaa
      241 ttgtaagtgg catatcgcaa agtaaagacg aagcaaaaat aactttgctt aaagtcgccg
      301 accggcctgg tgtggccgcc gctattttcg gccccctggc agaagcggcg attaatgtcg
      361 atatgattgt acaaaatata tctgaagacg gcaaaaccac cgatttgact tttacggtcg
      421 gcaccgctga tttggaaacc gcagtatctg ttatagaaaa aaatcaggac gatatcggga
      481 ttggtaagat cattgctgat tcggatgtgg ttaaaatatc cgtcgttggt gtcggcatgc
      541 gttcccacgc cggggtggcg caaaaaatgt tcctgactct cgccgagttt ggcatcaata
      601 tcaaagtgat atcaacctct gagatcaaag tgagtgtgct ggttgccgaa gaatatggag
      661 aaacggctat ccgtgcactc cacacggcct acggcttgga cagtgactaa tttggcctgc
      721 ggaagcggca attagggtaa aacaaagcgg agcctgacta aatatggcgc gaattcctac
      781 catgaccgga tcaaggcgtc tcttggcacg cctgcgcgac gtgatggctg gggctggtac
      841 cgcccaggag cgtctcgacc agctcgcctc catcatcgcc accgatttcg ttgccgaagt
      901 gtgctcagtc tacgtcctca gggcggggga agtcttggaa ttgtttgccg ccacgggttt
      961 ggcccctgaa gctgtccaca atacacgctt aagtattggt gaaggtttga ttggccgcat
     1021 tgccgtacag gcccggccac ttgccctggc cgatgcgcaa agccatccgg attttgctta
     1081 tcgtcccgaa accggcgagg aaatttttca gagcttggcg ggtgtgccga tcctcagggg
     1141 tggccgggtt acgggcgtgc tggcggttca aaataaaacc ggccgatcat ataccgaaga
     1201 agaaattgag accttagaaa ccatcgccat ggtgattgcc gaactgatcg ccagcagtaa
     1261 tctgttgagc gaagaggagt tgcatgcggt tgatggtatg tctctcgtgc cggtctccat
     1321 agaaggagtc cggttcaatg gcggtttggc aatcggtgac gcggtacgac acgaacggcg
     1381 tattcaaata ttaaaactcg tggcggatga tccggaggct gaacaacagc ggctcgaccg
     1441 ggcagtcgct gaaatgcacg gcgccatcga tgaaatgctg gaagccaaag atgtcgccga
     1501 aggtggtgaa catcgcgata tcttggaaac ctacaaaatg tttgccgaag atgccggctg
     1561 gctggcccgc atcaatgagg ccatcatcaa tggtctcacg gccgaggcgg cggtcgaaaa
     1621 agtacgcaat gacacgcggg cgcggtttag aaatcaaaca gaccgctatt tgcgcgaacg
     1681 cctccacgat tttgatgatc tcgcccaccg cttgttgcag catcttgtcg gtaaaacaga
     1741 agtaaacgag accaacaatt tacccgaaaa catcatattg gtggcgcgca acatggggcc
     1801 ggcggaactg ctagattatg accgctcgtg ccttcgcggc ttggtgctcg aggaaggctc
     1861 ggcaaccacc catgtcgcca ttgtcgcacg ggcgctggat attccggtgg tcgggaaaat
     1921 gcctgaaatc ctggataaag ttgaacctaa tgacacggtc atcgtcgatg gcgataacgc
     1981 cgaagttcat atccggccag ccgacaatat ccgccaagct tttattgata ccttaaaagc
     2041 gcgcgcgcag cgcatggcga cctatgccag tctgcgggat gtcccggccg aaaccaaaga
     2101 tggtattcga gtggcgctcc atatcaatgc cgggttgctt gccgacatgc aaaatatgac
     2161 cgagaccggt gccgacgg
//
LOCUS       DASCNL010000346         3275 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000749979, whole genome shotgun sequence.
ACCESSION   DASCNL010000346 DASCNL010000000
VERSION     DASCNL010000346.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000749979"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="QF359_04680"
     CDS             complement(<1..874)
                     /locus_tag="QF359_04680"
                     /inference="COORDINATES: protein motif:HMM:NF015366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HJO86235.1"
                     /translation="MQIRNLTKLLLGAVLALGLSIDDVKAEYPEKPITLVLPVGAGGS
                     HDRNARVFTSVIPTYLGNAIIVKLMPGASGQVGTANVAKSKPDGYTLLFTHNYFDQLQ
                     KHVKKLPYNTDKEFITVGKLNSGNFSVIVHGNSPYKTWGQLVAFAKKNPGKLKFAHSG
                     NWGATHAPALQLFTEAGIAKSIVMVPYKGGGPSMRGFLAREADFTMQFKSTILGQKGK
                     VRVLISAGTKTAFKGVPTFKDLGYTSDIGLMHRVIMAPRKIRADRLAKLRGALLKVQK
                     DKTYKKLIINIAEIT"
     gene            complement(1060..2565)
                     /locus_tag="QF359_04685"
     CDS             complement(1060..2565)
                     /locus_tag="QF359_04685"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO86236.1"
                     /translation="MFEAFLEGIGLALRLDTMIYMSGGLFLGMFVGALPGFTTLMAMA
                     ILLPISFFLHPLLGIPFLIGVYKGGIFGGSIPAILVSMPGTGAAVATTFDGPALTKKG
                     QARKALEIALFSSVTGDFSSDIITIALIGPIAAVALLLGPPELAAILLLALIVISATS
                     SGVFVKGLLMLVVGLFFGMIGQDPIGALSRFSFGIPQIESGIPLLPMLIGVFALPEIF
                     SNIEKKATAFIKAEDLQIRGDRLTWGEFKSCGRTIARSTMIGTSIGMIPGVGQVVAAF
                     MGYAAAKSASTHPETFGEGELEGVAAAETANNAVNGPTLVPLLTLGIPGDNLTVILVG
                     AFIAQGMRPGPQLMEEQAPLVFAILVAMVIANVLFLGIGYICIPFFAKVVTIRKSFLL
                     PLTLVFAFAGTWIFRGQPFDLGVLVFFGAFGYIAKKLHFDVTPMAMGFILGPTLEYSF
                     GQSVTLSSGHLLSYMLLERPITGVIFAITPIATFLMWRRSARLRKQFGTEE"
     gene            complement(2603..3124)
                     /locus_tag="QF359_04690"
     CDS             complement(2603..3124)
                     /locus_tag="QF359_04690"
                     /inference="COORDINATES: protein motif:HMM:NF018979.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HJO86237.1"
                     /translation="MEQVAEKKFNFNTVAAAIFIALAVILLLIIPSQIDKPLIQLSFG
                     QFNLPPELFPQIVAACMLVLGGWFFYKSFSIEQINELKNLDKEALANVSITLVMMAIY
                     VPMMVNLGFVLGSAIMIFAMSTYFGNRNFVIGVLISIFLPMLIFVTFRRLLLVELPPF
                     PIDIYPLTNWSLI"
BASE COUNT          954 a          813 c          734 g          774 t
ORIGIN      
        1 cggtgatttc agcaatatta ataattagtt ttttgtaggt tttgtctttt tgcactttaa
       61 gcaaagcacc ccggagcttg gcgagacgat cagcccgaat tttgcgcggc gccatgataa
      121 cgcgatgcat caagccgatg tcggatgtgt agccaagatc tttaaaggtc ggcacgcctt
      181 tgaaagcggt tttcgtacca gcgctgatga gcacccggac tttacctttt tgacccaaaa
      241 tcgttgactt aaactgcatg gtgaaatcag cttcgcgagc caagaaacca cgcattgaag
      301 gtccaccgcc tttatagggc accataacga tgcttttggc gataccggct tcggtgaaaa
      361 gctgcaatgc cggagcatgg gttgcacccc agttaccgga atgagcaaat ttcaatttgc
      421 ctggattctt tttcgcgaac gccaccaact gaccccaggt tttatatggg ctgttgccat
      481 gaacgatgac ggagaagttg ccagagttca gcttacccac agtgatgaat tctttgtcgg
      541 tattgtatgg taattttttc acgtgttttt gtagctgatc aaaatagttg tgcgtaaaca
      601 gcagcgtata cccgtctggc ttagatttgg cgacgttggc ggtaccaact tggccggaag
      661 cacccggcat caattttacg atgatggcat tgccgagata ggttggaata acactggtga
      721 aaacacgagc gttccggtcg tgagatccac cagcacccac tggtagcacg agcgtaatcg
      781 gtttttctgg atattcggct ttaacgtcgt ctatcgacag acctaaagca agaactgccc
      841 ccagaagaag ttttgttaga tttcgtatct gcattttttt tcctctctat aataggttta
      901 aattattgcc caaaaaacct atcggcttaa agggcgtttt caatccccgt attcactctt
      961 atataagaca tcaggggtaa agccttcgtc aagacctaat acctctaaat tccattgatt
     1021 ttataagttt tgttcggtat tagaactttc tctattttct cattcttcgg tcccaaattg
     1081 ttttctcaat cgtgccgaac gccgccacat caagaaggtt gcgatcggtg taatagcaaa
     1141 aataaccccg gtgataggtc gttccagcag catgtagctg agcagatgac cacttgacag
     1201 cgttacactt tggccaaatg aatattcgag cgtcgggcct aaaataaagc ccatcgccat
     1261 cggcgtgaca tcaaaatgaa gttttttggc aatgtagccg aacgcaccaa agaatactaa
     1321 aacacccaga tcaaacggct gcccgcgaaa tatccaggtg ccggcaaagg caaagaccag
     1381 agtcaacggc agcaagaacg attttcggat ggttacaact ttggcaaaaa acgggatgca
     1441 gatataaccg atacccagga ataaaacatt agcgatcacc atggcgacca gtatggcaaa
     1501 gaccagcggt gcttgttctt ccatcaactg cggaccgggc cgcatacctt gggcgataaa
     1561 tgcgccaacc agaataaccg taagattatc gcctggtata ccaagggtca gcaacggtac
     1621 aagtgtcggc ccgttcaccg cattgttagc ggtttcggcg gcagcgacgc cttcaagttc
     1681 gccttcacca aaggtttctg gatgagtcga ggccgatttc gctgctgcat accccataaa
     1741 ggccgcaacc acttggccaa cacctggaat cataccgatg gaggtaccga tcatggtcga
     1801 gcgcgcaatc gtccggccgc agcttttaaa ctcaccccag gttaggcgat cacctctaat
     1861 ctgcaaatct tcggctttga taaaggctgt ggcctttttc tcaatattgg aaaaaatttc
     1921 gggcagagca aacacaccga ttagcatcgg cagtaatgga ataccagatt cgatctgcgg
     1981 aatgccaaac gagaaacggg aaagcgcacc aatgggatcc tggccaatca tgccaaagaa
     2041 cagaccaacc accagcatca acaggccttt gacaaaaaca ccggaagacg tcgccgaaat
     2101 cacgatcaac gccagcaaca ggatcgccgc cagttccgga ggacccaaca acaacgccac
     2161 cgccgcaatc ggtccgatca acgcaatggt aatgatatca ctcgaaaaat caccggtaac
     2221 cgacgaaaac agtgcaatct ccaacgcttt ccgggcttgg ccttttttgg tcagcgccgg
     2281 cccgtcaaag gtcgttgcta cggcagcacc agtgcccggc atcgaaacca gaatcgctgg
     2341 gatagagccg ccaaagatgc cgcctttata aacaccgatc aaaaatggaa ttcccagcag
     2401 cggatgaagg aaaaatgaaa tcggcagcag gatcgccatc gccatcaacg tggtaaaacc
     2461 gggcagtgca ccaacgaaca tacccaaaaa taatccaccc gacatataga tcatcgtatc
     2521 caatcggagt gcgaggccga taccttctaa aaacgcttca aacatatagt ttctgtgctc
     2581 cgaattcagt atcgatcacg agttaaatca atgaccaatt ggtcagcgga taaatatcaa
     2641 tcgggaaagg tggcaattcg accagcagta aacgccggaa cgtgacaaat atcagcatcg
     2701 gcaaaaagat gctgatcagc actccaataa cgaaattacg gttaccgaaa taagtcgaca
     2761 tggcaaaaat cataatggcg ctacccaaaa caaaaccgag attaaccatc atcggcacat
     2821 aaatcgccat catcaccaag gttatagaga cgttggcaag agcttcttta tcaagattct
     2881 taagctcgtt gatttgctca atcgaaaagc ttttataaaa aaaccaccct ccgagcacca
     2941 gcatgcaggc ggcgactatt tgcgggaata actcgggcgg caggttgaac tgtccgaaag
     3001 acaattggat cagtggctta tctatctgcg aaggaattat cagtaataga atgacggcaa
     3061 gcgcaatgaa aatagctgca gcaaccgtgt taaaattaaa ttttttttct gctacttgct
     3121 ccataaatct tgattcagtt ttaattagct tggaattcga attgacgata tatcattaga
     3181 gttcaacggc aaatttaccg gttcattccg ttcgactgac aaatccgccg ccatataaac
     3241 ctccatcacc tgacgagctt gcgtcggcgt cacca
//
LOCUS       DASCNL010000347         2339 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000752111, whole genome shotgun sequence.
ACCESSION   DASCNL010000347 DASCNL010000000
VERSION     DASCNL010000347.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000752111"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="QF359_04695"
     CDS             <1..374
                     /locus_tag="QF359_04695"
                     /inference="COORDINATES: protein motif:HMM:NF024591.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HJO86238.1"
                     /translation="WFKTGDMVIIDEGNNVAMTGRVKDIINRGGIKINPLDIEILLDE
                     RPDVLQSAVVPMPDKLLGERACLFLVMAPDKTMTLDNVREFLNSKGIMKVKWPERLEI
                     IDAMPITVTRKVIKGRLVEML"
     gene            complement(549..1322)
                     /gene="yqeC"
                     /locus_tag="QF359_04700"
     CDS             complement(549..1322)
                     /gene="yqeC"
                     /locus_tag="QF359_04700"
                     /inference="COORDINATES: protein motif:HMM:TIGR03172.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium cofactor biosynthesis protein YqeC"
                     /protein_id="HJO86239.1"
                     /translation="MSRGNRSILIDCLGLTTVRLIALTGAGGKTSLMFALAREFVAAG
                     KRVLVTTTTKIATDEATGPWPSFGATSATDIISQAGTAPVVIAYHHEQPSDQRLFGFE
                     PTIIDEVKRQGTFDRILVEADGSARRPLKAPATHEPVVPATTDAVIAVAGLNGIDQPL
                     TSEHLFRPEIWQSLTDDTAGQPITAAAIVQAYQHPDGLAKGCPSGAAKILYLNQADTP
                     ERLAAARHILQQLASNTEKQPDRAAYGTLLPSPEIIGHI"
     gene            complement(1306..2115)
                     /gene="yqeB"
                     /locus_tag="QF359_04705"
     CDS             complement(1306..2115)
                     /gene="yqeB"
                     /locus_tag="QF359_04705"
                     /inference="COORDINATES: protein motif:HMM:TIGR03309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium-dependent molybdenum cofactor
                     biosynthesis protein YqeB"
                     /protein_id="HJO86240.1"
                     /translation="MNRMPFILIRGAGEMASAVAWRLHRANLSRICMLELANPLAVRR
                     AVSFSTALETGSHNVDEVVARTAQRAEDIEAAWQDQKIAVVLTNDWQGITSLHPDVLV
                     DATLAKRNLGTSIDQASLVIALGPGFEAGTDCHLVIETNRGHDLGRIIDTGKAEANTG
                     VPGGIDGFTTERVLRAPTTGAFETDLDIGEMVQAGDVIGEVAGLPVTAEIDGVLRGLI
                     RTGTEVGDGLKIGDIDPRGEASYCFTISDKARALSGSVLEGIMRSFNQPGE"
     gene            complement(2126..>2339)
                     /locus_tag="QF359_04710"
     CDS             complement(2126..>2339)
                     /locus_tag="QF359_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86241.1"
                     /translation="PSFQNKRRNPVIFGDVFFDDILALTGDTGARAIIDANPGRALAI
                     GFYHEQSFLDVDEEIDLNSLHSTGTN"
BASE COUNT          567 a          600 c          644 g          528 t
ORIGIN      
        1 gctggttcaa gactggagat atggtcatca ttgatgaagg caacaatgtg gccatgaccg
       61 ggcgtgtcaa agacatcatt aatcgaggcg gcatcaagat aaatcctcta gacattgaga
      121 tcctcttaga tgaacgcccc gatgtgctcc aatcggcggt ggtgcccatg cccgacaagc
      181 tgctggggga gcgggcttgt ttatttctag tcatggcacc ggataaaacc atgactttgg
      241 ataatgtaag agaattttta aattcgaaag gcattatgaa agtcaaatgg cctgaacgcc
      301 tagaaattat tgacgccatg cctataacgg tgacccggaa agtcatcaag ggcaggctag
      361 tggagatgct gtaatttgct agggctcaga ttctgaaatt caatgagata ataccggtat
      421 cgcatattgt gttggcggag aagggagaca cggctgaagg cgttaaacgt gctgagttta
      481 tccgctcaga aatgcgccag ggatttaaat aacggatata agtctagata agctcgaaaa
      541 ttttctcact aaatatggcc gataatttcc gggcttggca gcagcgttcc gtaggccgcg
      601 cggtcgggct gtttttccgt attgctagcg agttgttgca agatgtgacg ggctgcagcg
      661 aggcgttccg gtgtatcggc ttggttgaga tacagaattt tagcagcgcc cgacgggcag
      721 cctttggcca gaccgtccgg atgctgatag gcctggacaa ttgccgcagc ggttattggt
      781 tggccagcgg tatcatccgt cagactctgc caaatttctg gccggaaaag atgctcgctg
      841 gttaagggtt ggtcgatccc gttcaggccg gcaacggcga tcacggcatc agtggtggcc
      901 ggcaccaccg gttcatgagt ggcgggtgct ttcagggggc ggcgggccga gccgtccgct
      961 tcaaccaaaa tccgatcaaa cgtaccctgg cgtttgacct catcgatgat tgtcggctcg
     1021 aatccaaaca gccgttgatc actgggttgt tcgtggtggt aagcaatgac caccggcgca
     1081 gtgccagcct gcgaaataat atccgttgcc gaagtggcgc cgaaggaggg ccacggtccg
     1141 gtagcttcat cagttgcaat tttagtcgtg gtggttacta aaacgcgctt accggcagcc
     1201 acaaattccc gcgccagggc aaacattaaa ctggtcttgc cacccgctcc agtgagagca
     1261 atcaggcgga ccgttgtcag tcctaaacag tcaattaaga tcgacctatt cccccggctg
     1321 attgaaagag cgcattatac cttccagtac cgatcctgaa agagcccgcg ctttatcgga
     1381 aatggtaaag cagtagctag cttcgcccct gggatcgata tcacctattt tgagaccatc
     1441 gccaacctcg gtgccggtcc ggattaggcc acgcagaaca ccatcaatct cggctgtcac
     1501 cggcagaccc gcaacctcgc caatgacatc accggcttgg accatctcgc caatatctaa
     1561 atctgtttca aatgcacccg ttgttggcgc ccgcaaaacc cgctcagtgg taaagccgtc
     1621 gatgccgccc ggcacgccag tattggcttc ggccttgcca gtatcgatga tgcggccaag
     1681 atcatggcct cgattggtct caatcacgag atggcagtcg gtgcccgctt cgaagcccgg
     1741 gccaagagca attaccagag aagcctgatc gatagatgtg ccgaggttcc gtttcgccaa
     1801 tgttgcatca accagcacat cggggtgaag gctggtgatt ccctgccaat cattggtcaa
     1861 cacgacagcg attttttgat cttgccaagc ggcctcaata tcttcggccc gctgagcggt
     1921 gcgtgccacc acctcgtcga cgttatgaga gccggtttcg agggcggtgc taaaagatac
     1981 ggcacggcgt accgcgagag gattagcaag ttccagcatg caaatacggc ttaggttggc
     2041 ccgatgcagt cgccaggcga cagcgcttgc catttcgccg gcaccacgga ttaagataaa
     2101 tggcatcctg ttcataacag caatctcaat tggtgccggt ggagtggagg gaattcaagt
     2161 caatctcctc atcgacgtca agaaaagatt gctcatggta aaagccgata gccaaagccc
     2221 gaccaggatt ggcgtctata atggcccgtg caccggtatc gccagtcaaa gccagaatgt
     2281 catcgaaaaa tacgtcaccg aatatcaccg gattgcgccg tttgttttga aaggacggg
//
LOCUS       DASCNL010000348         1304 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000752212, whole genome shotgun sequence.
ACCESSION   DASCNL010000348 DASCNL010000000
VERSION     DASCNL010000348.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000752212"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1304
                     /locus_tag="QF359_04715"
     CDS             <1..>1304
                     /locus_tag="QF359_04715"
                     /inference="COORDINATES: protein motif:HMM:NF028199.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HJO86242.1"
                     /translation="IDDDRLSGQFGASTIEDLWLQLSERPYPTVTDQVDPVELDAIIP
                     QESQRIFTAAETTIALEVDLLGSGPKTLSRPILWDSDFKVEEDWPVKFFHDINILNPK
                     RDSDVKVPWELSRLQWLIPVGQAYMLSGDEKYADFTRDVLMDWIEANPYGRGVNWATA
                     MEAAMRIYTWTWLFYVFKESQSWDSYDFRASFLRMLYEHGVFAERYIEDYGINGNHCT
                     ADAGAMVFVGLFFGSGKVPKLWQKNGWQLLTQEISRQVLDDGTDFEGSVAYHRFVAEL
                     FFWPARYRRVSGLEVDTNYQKRLLSMAEFTGSYTKPDGLAPLWGDADDGRVLPFGDQG
                     LNDHTYLPDVIHTEWDGAGQDFASVEAQAELFWTFGPQITATARSEAGYSDPMSRIFT
                     NSGFYIMASQKDHVFIECGPVGFGGRGVHGHNDCLSFEACLN"
BASE COUNT          302 a          289 c          360 g          353 t
ORIGIN      
        1 catagatgac gaccgtttat ctggtcagtt tggagcctcg acaattgagg atctctggct
       61 gcaattgtcg gaacgcccct atccaacggt tacggatcaa gttgatccgg tagagttgga
      121 cgcaattatc cctcaagaat cgcaacgtat atttacagct gctgaaacca ccattgcttt
      181 ggaagtcgat ttattgggat ctggtccgaa aactctgagc cgccccatcc tttgggattc
      241 agattttaaa gttgaggaag attggccggt aaaatttttc catgatatca acatccttaa
      301 tcctaagcgc gacagtgacg tcaaagtgcc ttgggagttg tcgcggctgc aatggctaat
      361 accggttggc caagcttaca tgctgagtgg agatgaaaaa tacgccgatt ttacgcgcga
      421 cgttttgatg gattggattg aagctaatcc ttatggccgc ggcgtgaatt gggcgactgc
      481 gatggaagcc gccatgcgaa tttacacctg gacctggctt ttttatgtat tcaaagaatc
      541 tcagtcctgg gatagttatg atttcagagc cagctttttg cgcatgctct atgagcacgg
      601 tgtgtttgcc gagcgctaca tcgaagacta tgggattaac ggcaatcact gcacggcgga
      661 tgcaggggca atggtgtttg tcgggctttt ttttggttcc ggtaaagtac caaagctctg
      721 gcagaagaat ggttggcaac tgctgacaca agagatatcc cggcaagtgt tagatgatgg
      781 taccgatttt gaaggctcgg tagcctatca tcgatttgtc gctgagcttt ttttctggcc
      841 agcccgctat cgccgggttt ctgggttgga agtggatacc aactatcaaa aacgcctgct
      901 gagcatggca gaatttaccg gcagctatac caagccggac ggcttggcac cgctctgggg
      961 cgatgcggat gatggtcggg tcttgccttt cggtgatcaa ggtttgaacg atcataccta
     1021 tctgcccgat gttattcata ccgagtggga tggcgccgga caggactttg ccagtgtcga
     1081 agcccaggca gagttgtttt ggactttcgg accccaaatc actgcaacgg caaggagtga
     1141 ggctgggtat tctgacccaa tgtccagaat tttcacaaat agcggtttct acattatggc
     1201 gagccaaaag gatcacgtgt ttattgagtg cggtccggtt ggctttggcg gccggggcgt
     1261 gcacggccat aatgattgtt tatcgtttga agcctgccta aacg
//
LOCUS       DASCNL010000349         1071 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000754692, whole genome shotgun sequence.
ACCESSION   DASCNL010000349 DASCNL010000000
VERSION     DASCNL010000349.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000754692"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..1071
                     /locus_tag="QF359_04720"
                     /pseudo
     CDS             1..1071
                     /locus_tag="QF359_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592410.1"
                     /note="internal stop; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
BASE COUNT          287 a          237 c          274 g          273 t
ORIGIN      
        1 tactcaactg ccggtcggtg ccgaagccga ttttgccggc gttatcgatc taattaaaat
       61 gcaggcgatc acctggaaaa atgaagatct tggtgctgaa tttgtataca gcgatatccc
      121 tgctgatcgc caggaagaag cggctgaata ccggaaaaaa ctgattgaaa cggctgtcga
      181 acaagatgat gacgctgtgg aagcctatct cgaaggcacc gagccagatg aagaaaccct
      241 caaaaaatgt attcgcacgg gtacgctgaa tgcctctttt gtacccgttc ttttgggttc
      301 agcctttaaa aataaaggcg tgcagccgtt gcttgatgcg gttgttgatt tcttacctgg
      361 tccgaccgac gttgatgcga ttaaaggcgt cagggttggc agtgacgagg aaattgagcg
      421 tcataattct gacgatgaag ctttttcagc tctcgctttt aaaattatga acgatccttt
      481 cgttggttct ttgacctttg tccgcattta ctccggtgtt cttgaagccg gttcctacct
      541 ccaaaatacc gttaaaaata agcgtgaacg cgttggccgt atgctgatga tgcactccaa
      601 ctcgcgtgaa gacattaaag aggcgcgtgc gggtgatatc atcgcgttgg caggtttgaa
      661 agacacaaca actggtgaca cgctttgctc acctgatgat caggttatct tggagcggat
      721 ggaattcccg gaaccagtaa ttgaaattgc agttgagccg aaaaccaaag ccgaccaaga
      781 gaaaatgggt caagccctgg gccgtttggc ggcagaagat ccgtctttcc gggtcgccag
      841 tgatgaagaa agcggtcaaa ccattattaa aggtatgggc gagcttcact tagatatcat
      901 cgtcgaccgg atgaagcgag agtttaaagt ttaagccaat attggtcaac cgcaggttgc
      961 ttatcgcgag actattaagg tgccgtctga cattgactat acccacaaaa aacaatcggg
     1021 tggtgctggt cagtttgccc gcatcaaaat taaatttgag ccgctaccgc c
//
LOCUS       DASCNL010000350         2784 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000760542, whole genome shotgun sequence.
ACCESSION   DASCNL010000350 DASCNL010000000
VERSION     DASCNL010000350.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000760542"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="QF359_04725"
     CDS             <1..571
                     /locus_tag="QF359_04725"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013506.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HJO86243.1"
                     /translation="ADLATSAGYMTAIAADQIFAHQSTITGSIGVIMQTTDITGLLEK
                     IGIKPESIKSAPLKAQPNPLEPMSEKARAAAQSVVANMFAMFVDMVTERRKMDRATVT
                     KLADGRVYTGRQALENGLIDALGGEKEALDWLNSAKKISKSLPKRALEIRHDDNFLRK
                     TLEDVFGKTLISERLRLDGLISLWHPNLQ"
     gene            692..973
                     /gene="ihfB"
                     /locus_tag="QF359_04730"
     CDS             692..973
                     /gene="ihfB"
                     /locus_tag="QF359_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006417 - regulation of translation
                     [Evidence IEA];
                     GO_process: GO:0075713 - establishment of integrated
                     proviral latency [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HJO86244.1"
                     /translation="MTKSELITYLAEENPHLYQRDVERIVTTIFEEIASALSRGDRVE
                     LRGFGAFSVKQRDARIGRNPRTGEAVQVDAKRVPYFKTGKQLRDKLNNN"
     gene            1031..1357
                     /locus_tag="QF359_04735"
     CDS             1031..1357
                     /locus_tag="QF359_04735"
                     /inference="COORDINATES: protein motif:HMM:NF018058.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HJO86245.1"
                     /translation="MKRILIWLAMIVVSVVVVVFSISNRGLMTLDFWPFPVLQDMPVY
                     IPVLIAGFLGFLFGGTIAWFSAGGTRSKARKASRRATSLEKDLTVLQQKIDELDAKRK
                     QTSINS"
     gene            1424..2158
                     /gene="pyrF"
                     /locus_tag="QF359_04740"
     CDS             1424..2158
                     /gene="pyrF"
                     /locus_tag="QF359_04740"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HJO86246.1"
                     /translation="MTSNQQPHERIFIPLDTPNLDRALEIATTLKDLVGGVKIGKEFF
                     TALGPEGVARVTELGMPLFADLKFHDIPNTVAGAVRSAVHLKPIILNVHAQGGRTMLE
                     AACDAAAEEAAKIGIPVPLLLGVTVLTSLDDDDLSDIGVSDSTLDQVKRLAALSQECG
                     LDGVVCSAAEIAALRDTCDPDFKLLTPGIRPTWAAAGDQKRIVTPGEAIKRGADFLVI
                     GRPIYGADDPAEAAKKIAAEIEEELN"
     gene            2160..>2784
                     /locus_tag="QF359_04745"
     CDS             2160..>2784
                     /locus_tag="QF359_04745"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HJO86247.1"
                     /translation="MNLEVKICGLDRAESVDAAVKHGAAYTGFVFYPPSPRNVTPEDA
                     AVLIARVPENVKRVGLFVDPTDAEIEAVLENSQLDLIQLHGAETTARVQEIKQLASLP
                     AMKVIKLASEANLAGVADYYDSADCLLFDAKPPADMVNALPGGNALAFDWSLLRDVNI
                     SLPWMLAGGLTPENLNEAVTTSGATAVDVSSGVEDTPGFKNLNKIIEF"
BASE COUNT          711 a          664 c          727 g          682 t
ORIGIN      
        1 ggctgatctc gccacctccg ccggttatat gacggcgatt gccgccgatc agatttttgc
       61 ccaccagtca actataacgg gctcaattgg cgtcattatg cagaccacgg atattacggg
      121 attgttagaa aaaattggca tcaaacctga atcgattaaa agcgcaccgc ttaaagccca
      181 gccaaatccg ctggaaccga tgagtgaaaa agcccgagca gcagcacaga gcgtggtagc
      241 caatatgttc gcaatgtttg tcgatatggt aaccgagcgc cgcaaaatgg accgtgcaac
      301 tgtcactaaa ctggcggatg ggcgggttta taccggccgc caggcattag aaaatggcct
      361 gattgatgcg ctgggcggtg agaaagaggc gctcgattgg ctgaactctg caaagaaaat
      421 tagcaaatct ttgccaaaac gagccttaga aatccgccat gacgacaatt ttctgcgtaa
      481 aacgcttgaa gatgtatttg gaaaaacatt gatttctgaa cgacttagac ttgacggctt
      541 gatctccctt tggcacccta acctacagta aagacacaat tttatagaat aatgcgcatt
      601 tggaacattt taattccaac agcgtcagaa attgaacttg tggacaaata cttgagtagc
      661 gttgaatctt gccgaggagg gcaggaagac gatgacaaaa tcagaactca ttacctatct
      721 agcggaagaa aatccgcatc tgtatcaacg cgacgttgaa cggatagtta caacgatttt
      781 tgaagaaatc gcttcggcgt tgtcccgggg agaccgggtt gagttacggg ggtttggtgc
      841 tttttcagtc aaacaacggg atgcgcgcat tggccgcaac ccgagaaccg gtgaggctgt
      901 acaagtcgat gccaaacgcg tgccttattt taaaaccggc aagcaattac gcgataagtt
      961 aaacaacaat tagaaatctc ttattctacg ggctgatttt gtagccgtca gccaattgga
     1021 gtagcccgcc ttgaaacgta ttttaatttg gcttgccatg atcgtggtaa gtgtcgttgt
     1081 tgtggttttt tcgatatcta accgtggcct gatgactctt gatttttggc cattcccggt
     1141 cctgcaggat atgccggttt atataccggt tttgatagcc ggttttttag gttttttatt
     1201 tggcggtacc attgcctggt tctcggccgg tggcacccgc agcaaagccc gcaaggcatc
     1261 tcgccgggca accagtctcg aaaaagattt gacggtcctg caacaaaaaa ttgacgagct
     1321 cgacgccaaa cggaaacaga ccagtataaa ttcataaagt ttcgtttctg gtggtctttt
     1381 aaggaggcct gtataagagg aaaaattcag gagcagatcg ccgatgactt caaatcaaca
     1441 accgcatgag cgtattttta tcccgctaga tacgcctaat ttagaccgcg cgcttgaaat
     1501 cgccaccaca ctcaaagact tggttggcgg cgttaagatc ggcaaggaat tttttaccgc
     1561 cctcggtcca gaaggtgtgg cacgagtcac cgagctcggc atgccgctat ttgctgatct
     1621 aaagttccac gatatcccca atacggtcgc tggtgcggtg cgttcggccg tgcatcttaa
     1681 gcccatcatt ctcaatgtcc acgcccaagg tggccgcacc atgcttgaag ctgcttgcga
     1741 tgcagcagct gaagaagcgg caaaaatcgg tatcccggtg ccgctcctat taggggttac
     1801 cgtactgacg tcactcgatg atgatgatct tagtgatatt ggtgtcagtg acagcaccct
     1861 tgatcaggtc aaacgtctgg cggctttgtc acaagaatgc gggttggatg gtgtggtttg
     1921 ctcggcagcc gagatagcag ctttgcgtga tacttgcgac ccggacttta aactactgac
     1981 cccgggcatc cgtcccacct gggcggcggc gggtgatcaa aaacgcatcg tcacgccggg
     2041 tgaggcgatt aaacgcggcg ccgactttct ggttattggc cgcccgattt atggcgccga
     2101 tgatccggcc gaggccgcca aaaaaatcgc tgctgaaatc gaagaagagc tcaactgata
     2161 tgaatctaga ggtcaaaatt tgtggccttg accgggcaga gagcgtggat gcggcggtaa
     2221 aacatggtgc ggcttatacc ggtttcgtct tctatccacc ctcaccccgc aatgtaacgc
     2281 cggaggatgc agcagtcctg attgcccggg tgccggaaaa tgtcaaacgg gtgggcttgt
     2341 ttgtcgatcc aactgacgcc gaaattgaag ccgtgcttga aaactctcag cttgacctca
     2401 ttcaactgca cggcgctgaa acgacagcac gagtgcagga gatcaaacaa ctggccagtc
     2461 tccccgccat gaaagttatt aaactcgcga gcgaggctaa tcttgccgga gtcgctgatt
     2521 attatgatag cgctgattgt ttactatttg atgccaagcc acccgccgat atggtgaacg
     2581 cactgcctgg tggtaatgca ctggcgtttg attggagttt attgcgcgat gtaaatatct
     2641 cgctgccctg gatgctggcc ggcggattga cgccagagaa tcttaatgag gccgtcacaa
     2701 caagcggggc cacagctgtc gatgtttctt ccggcgtaga agatacaccg gggtttaaga
     2761 atttgaacaa aattatagag tttt
//
LOCUS       DASCNL010000351         1489 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000761223, whole genome shotgun sequence.
ACCESSION   DASCNL010000351 DASCNL010000000
VERSION     DASCNL010000351.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1489)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1489)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000761223"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="QF359_04750"
     CDS             <1..446
                     /locus_tag="QF359_04750"
                     /inference="COORDINATES: protein motif:HMM:NF012870.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HJO86248.1"
                     /translation="LSNGRSYKILTVIDEYTREALCVAAKPRMGHAEVLDALYPLFLK
                     HGKPHYIRSDNGSEFIARDLQAWLKKVGIKSIQIYPGSPWENGYNERFNGTLRKEVLN
                     AEWFSTIKQAQIVINIWLKQYNHIRPHQSLNMRPPVPETLHQNGT"
     gene            complement(431..802)
                     /locus_tag="QF359_04755"
     CDS             complement(431..802)
                     /locus_tag="QF359_04755"
                     /inference="COORDINATES: protein motif:HMM:NF024997.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HJO86249.1"
                     /translation="MMYVRYSLSLRNVEDLRHERGIDICHETVRYWWNKFGPLFVKEI
                     REKRLHPVPHHSNRKWYFDEVFVKMNGETYYLWSAVDHEGEILEAFVSKRRDRKAALD
                     FLKKIMKRYGKSVKPPFYVPF"
     gene            complement(886..1479)
                     /gene="recR"
                     /locus_tag="QF359_04760"
     CDS             complement(886..1479)
                     /gene="recR"
                     /locus_tag="QF359_04760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HJO86250.1"
                     /translation="MTTTEINHLIQLLSKLPGLGPRSARRAALHLIKNRESLMKPLGL
                     AMEAAAENVETCSTCGNLDTANPCAICTDIKRDTATICVVEEVADLWALERTASFKGL
                     YHILGGVLSPLDGVGPDDLTLDSLIARARSDAVNEIILATSATVDGKTTAHYITDRLA
                     DAGAIVTALAHGIPVGGELDYLDDGTLSAAMKERRGI"
BASE COUNT          406 a          367 c          337 g          379 t
ORIGIN      
        1 agctaagtaa tggtcgcagt tataagatac tgacggtcat tgatgaatac accagagaag
       61 ctttatgtgt ggctgcaaag ccgagaatgg gtcatgcaga agttttggat gcgctttatc
      121 cgttattcct caaacatgga aagccacact acatacgatc tgacaatggt tctgagttta
      181 ttgcccgtga tctacaagct tggctcaaga aggttggaat taaatctatt caaatctatc
      241 ccggcagtcc ttgggagaat ggatataatg aacgctttaa tggcacgctc agaaaagaag
      301 tcctcaatgc cgaatggttc tcgaccatca aacaggctca gatcgtcatt aatatctggt
      361 tgaaacaata caatcatatc cggcctcacc agtctttaaa tatgagaccg ccggtgccgg
      421 agactctaca tcaaaatggt acataaaaag ggggctttac agatttacca taacgtttca
      481 tgattttctt gagaaaatcc agcgctgctt ttcgatctct gcgcttggat acaaaggctt
      541 ctaaaatctc accctcatga tcaaccgcac tccaaagata gtaagtctcg ccattcatct
      601 tcacaaacac ctcatcgaaa taccacttcc gatttgaatg atggggaact gggtgcagtc
      661 gtttctcgcg aatttctttg acgaagagtg ggccaaattt attccaccaa taacgaactg
      721 tttcgtggca gatgtcgatg cctcgctcat ggcgcaaatc ttctacattt cgaagcgata
      781 gtgaatacct gacatacatc atcacggcca ggcgaatgat cccgggtgat gatgatcaca
      841 ggttgaagat ttatttaatt tgctcgccta tcaggcgaga tttttctata taccgcggcg
      901 ttctttcatg gccgcgctaa gagtgccgtc gtcaagataa tccaactcac cacccacagg
      961 aatgccgtga gccagggctg ttactatcgc cccagcatcc gccaaacgat cggtaatata
     1021 atgcgctgtc gttttgccgt cgactgttgc actggtggcc agaataattt cattcaccgc
     1081 atcactgcgg gcgcgggcga tgagactatc aagagtcaga tcatcagggc caacaccgtc
     1141 cagcggcgac aacacaccac ccaaaatatg ataaagacct ttaaacgacg cggtgcgttc
     1201 caaggcccac aaatcggcga cttcttcaac cacgcaaatc gtcgccgtat cccgtttaat
     1261 atcggtgcag atggcacatg gattggcggt atccaaattg ccgcaggtgg aacaggtttc
     1321 aacgttttca gccgctgcct ccatcgccag acccagcggc ttcatcaagg attcacgatt
     1381 tttaatcaga tggagcgctg cgcggcgcgc tgatctcgga ccgagccccg gcagctttga
     1441 aagtagttga ataaggtgat taatttcagt ggtggtcatt aaattggcc
//
LOCUS       DASCNL010000352         1250 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000761437, whole genome shotgun sequence.
ACCESSION   DASCNL010000352 DASCNL010000000
VERSION     DASCNL010000352.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1250)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1250)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1250
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000761437"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(199..>1250)
                     /locus_tag="QF359_04765"
     CDS             complement(199..>1250)
                     /locus_tag="QF359_04765"
                     /inference="COORDINATES: protein motif:HMM:NF025214.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJO86251.1"
                     /translation="AHPVGYNIMPLISHHDLSEVETFIYAENENNDDVTGQFKSHADH
                     WCSTSGQSDAQVAQKITADEIDILICLAGRFNLNRPTVAAHRAAPVQISFHDCASTGL
                     TEMDYWLTDKSLHPSDTPEKFSEDLYRLPVFYQFSSPADFPAVSSLPVDQNGFLTFGS
                     FNKLEKINDHVIALWADVLTSVPHSRLFLKYHDYFEDTDLVKHWQSKFAHFGITEDRL
                     LLAGNIDEQAKYLMLYDHIDIALDPFPFNGATTTFEALAMGVPVVAMIGKHFVDRVAG
                     SILQEAGLDHLIADTPRTYINAAQNLAENLPKLRLLRNSLRDRLTNSSLCDASQYAQN
                     IEIAYREMWRRWCAK"
BASE COUNT          329 a          275 c          311 g          335 t
ORIGIN      
        1 ctgtccttgg cgttacccga tatagctatg atcgggggca ggcgttatta acgccttccg
       61 tgagccggga atatcaataa ggttttgatc agggccgaga tcgggcaatt tgaattcttt
      121 ctaacggagc aatactagac caactttatc ttgtggaatt catttcgcca atagaacaat
      181 gtttcgctta ggtgtaattt attttgcgca ccagcgccgc cacatttccc ggtaagcgat
      241 ctcaatattc tgcgcatatt gactggcgtc acagagtgat gagttggtca gacggtcacg
      301 cagtgagttt cgcagtaagc gtaatttagg taagttttct gccaaatttt gggctgcgtt
      361 tatataggtt cttggcgtat cagcaataag atgatcaagc cctgcttcct gcaagataga
      421 accggcgacg cgatcaacaa aatgcttacc tatcattgct acaaccggca cgcccatggc
      481 gagcgcctca aatgtcgttg ttgcgccatt gaacgggaag ggatcgagag caatatcaat
      541 atggtcgtag agcatcaaat actttgcctg ttcatcaata ttgccggcca gcaataaccg
      601 gtcttcggta atgccaaaat gggcaaactt actttgccaa tgtttgacta aatcggtgtc
      661 ttcgaaatag tcgtgatatt ttaagaacag ccgggaatga ggtacagaag ttaatacatc
      721 tgcccacaag gcgatgacat gatcattgat tttttccagc ttgttgaaac tgccgaaggt
      781 cagaaagccg ttttgatcca ctggcaatga cgaaacagca ggaaaatctg ccggcgaaga
      841 aaattgataa aataccggta agcgataaag gtcttcgcta aacttctccg gcgtgtcact
      901 ggggtgaagc gatttatcgg tgagccagta gtccatttcg gtcagacctg tggaggcaca
      961 atcatgaaaa ctgatttgca ctggcgcggc gcgatgggcc gcaacggtcg gccgattaag
     1021 attaaaccgt ccggccaaac agatgagaat atcgatctcg tcggcggtta ttttctgagc
     1081 tacctgggcg tcgctttgtc cggaggttga gcaccagtga tcagcatgag atttaaactg
     1141 cccggtaacg tcatcattat tttcgttctc tgcgtagatg aaggtttcca cttcgctcag
     1201 atcatgatga ctgatcagcg gcattatatt gtaaccaact ggatgggcat
//
LOCUS       DASCNL010000353         1922 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000764687, whole genome shotgun sequence.
ACCESSION   DASCNL010000353 DASCNL010000000
VERSION     DASCNL010000353.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000764687"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(9..1073)
                     /locus_tag="QF359_04770"
     CDS             complement(9..1073)
                     /locus_tag="QF359_04770"
                     /inference="COORDINATES: protein motif:HMM:NF014893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJO86252.1"
                     /translation="MKQINVGVIGTGWCGGIRANTCASSALVNELHIAEIKLERLAEV
                     KELANPVLATTDYKELLRNDDIDAYFISATPEDIHYPIAKDCLNSGKHVFLEKPLSLT
                     LAEADELVNLADEKGVKFTIGYSQRFNPKFAYVKKSLNDGTLGKPVAAVVSRHITRGL
                     GTKIGGRIKLSPAAMEATHDLDFLLWCLEPAKPIRVYSQSAYGAMKDLTGLEDAQWMM
                     VTLDNGVVITVGAGWSSPPGHPNFSGTWIEFSGTEGMLTIDDTHRDVILNTMENGIRL
                     PMSSMPGEQVEHVFAGPMHNEGVHFLEAVAFDRPVMVTPTQARQVMEVYMAADLSVER
                     NEPVNLPLNSNDISSIRIPS"
     gene            1276..1665
                     /locus_tag="QF359_04775"
     CDS             1276..1665
                     /locus_tag="QF359_04775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86253.1"
                     /translation="MKNKKVALLIFVALATIQPIGAIKLFGNAWAQNSLAHTITISHR
                     KVQGKKTLRVTQGDQVELKWTTDEKVKLHLHGYDIEQTAVPGKTLTIKFKAKATGRFP
                     VTSHGFGGGKGHSHGSGALFYIEVYPK"
BASE COUNT          507 a          478 c          445 g          492 t
ORIGIN      
        1 agttttaatt agcttggaat tcgaattgac gatatatcat tagagttcaa cggcaaattt
       61 accggttcat tccgttcgac tgacaaatcc gccgccatat aaacctccat cacctgacga
      121 gcttgcgtcg gcgtcaccat aaccgggcga tcaaaagcga cggcttcgag gaaatgaaca
      181 ccctcattat gcattggtcc ggcgaagaca tgttcgactt gctctccggg catggacgac
      241 atcggcaagc gaatgccatt ctccattgtg tttaaaatca cgtctcgatg cgtgtcgtca
      301 atggtcagca tgccttcggt gccgctgaac tcaatccagg taccggaaaa gttgggatgt
      361 ccgggaggtg acgaccagcc cgctccaacg gtaataacaa cgccattatc aagcgtcacc
      421 atcatccact gggcatcttc cagaccagtg aggtctttca tcgcaccata agccgattgc
      481 gaataaaccc ggatcggttt ggccggctcc agacaccaga gcagaaaatc cagatcatgg
      541 gtcgcttcca tcgccgccgg cgaaagcttg atccgtccgc cgatcttagt gccaagaccg
      601 cgcgtaatat ggcggctaac gacagccgca accggtttgc cgagcgtgcc gtcattgaga
      661 ctctttttta cataggcaaa ttttggattg aagcgctggg aatagccaat agtgaattta
      721 acaccttttt cgtcagccag attgaccaac tcatcagctt ccgccaaggt cagtgacagc
      781 ggcttttcga gaaacacgtg cttgccggaa tttaggcaat ctttggcgat cggataatga
      841 atgtcttctg gagtagctga aataaaataa gcatcaatat cgtcgtttcg cagaagttcc
      901 ttataatcgg tcgtcgctaa taccggattg gccagttctt tgacttctgc caatcgttca
      961 agcttaattt cagcaatatg aagttcatta accagcgcac tgcttgcaca ggtattggca
     1021 cgaataccgc cgcaccagcc ggtccctatg acacctacat taatttgttt cattgagttc
     1081 caccacgatt ggtcttggtc ttttttaagt cttatataag agtgcgcaac ctatagtctt
     1141 tgatcgaacg ctgtcaagaa ccgagtctta atataaaatc aaaattacct attatcatta
     1201 atattagggt cgatcagccg tattttagcg gttatagatg atgaaacggg aactaacggt
     1261 taggtcacaa taaatatgaa aaacaaaaaa gtagcgcttt tgatatttgt ggcgctagct
     1321 accatccagc cgatcggcgc aattaagctt tttgggaatg cctgggctca aaattctttg
     1381 gctcacacga tcacgatcag tcatcgcaaa gttcagggca agaaaactct gcgcgtcact
     1441 caaggtgatc aggtcgaact taaatggacg accgatgaga aggtgaaact gcatttgcat
     1501 ggttatgata ttgagcaaac agcggtgccg ggaaaaacgc tgaccataaa attcaaggcg
     1561 aaagcgacgg gcagatttcc cgtgacctcc catggcttcg gtggcgggaa gggacatagc
     1621 catggctccg gtgcgttgtt ctacatcgaa gtctatccga agtgataaat ttcatctatg
     1681 acaaacgatt atattttagc acccccccgc cttactcctc ccccactaag aggaaggaaa
     1741 ttttagcgtc tgaaaaaacg ccccctctcc tccggaaaga ggggattagg gggaggagga
     1801 cctctttaca actatatttc gttccggtca taagtctgtt tactctcacc cccctgcccg
     1861 ccgtggcgca tgcgtttggc cagcgctatg atctgccgtt accgctctgg atgtttattt
     1921 gg
//
LOCUS       DASCNL010000354         3944 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000765199, whole genome shotgun sequence.
ACCESSION   DASCNL010000354 DASCNL010000000
VERSION     DASCNL010000354.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3944)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3944)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3944
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000765199"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            470..2656
                     /gene="uvrB"
                     /locus_tag="QF359_04780"
     CDS             470..2656
                     /gene="uvrB"
                     /locus_tag="QF359_04780"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HJO86254.1"
                     /translation="MMQQRIPDDIYFIPPKRPVIEAGDLLKVVSLYEPAGDQPEAIKE
                     LVDGIRAGDKDQVLLGVTGSGKTFTIAHAVQELNRPTLVLAPNKTLAAQLYGEMKEFF
                     PENAVEYFVSYYDYYQPEAYVPRTDTYIEKDASINEQIDRMRHSATRALLERSDVIIV
                     ASVSCIYGIGAVETYAQMTEKLEPGQTVDRNNLLKRLVELQYTRNDMAFYRGTFRVRG
                     DVVEIFPSHLEDRAWRLSLFGDELEVIWEIDPLTGEKIDTLPEVTVYPSSHYVTPRPT
                     LLQAIPQIKEEMKQVVADFEKEGKLLEAQRIEERTTFDIEMLETTGHCSGIENYSRYL
                     TGRNPGEPPPTLFEYLPENALIILDESHVTVPQLGGMYRGDFARKSTLAEFGFRLPSC
                     VDNRPLKFEEWEAMRPQTIFVSATPGPWELEQTSGVFTEQVVRPTGLIDPLCIVRPVA
                     TQVDDLLAECREVALNGQRVLVTTLTKRMAEDLTEYMHEAGIRVRYLHSDIDTLERIE
                     IIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSKTSLVQTIGRAARN
                     IDGRVILYADKMTDSLEYAIGETNRRRAKQQTYNDEHGITPESVKKGISDVLESVYEM
                     DYVTVDTGVSGDTELVGNQYQTHIDDLNARMIDAAANLEFEEAARIRDEIRRLEAIEL
                     GLGKPGVSKLAAAQAGLNKSRMPQKKMQQYGGTKMNKRKKKRRRRV"
     gene            complement(2973..3359)
                     /locus_tag="QF359_04785"
     CDS             complement(2973..3359)
                     /locus_tag="QF359_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86255.1"
                     /translation="MTEKVLKSNLGKPLPLDEVTIKEHIDNGTDWSSASVYVLGSIRK
                     GADGKPRFVIRYVRHVDGDLGGELRKHIGKYKGFRFKFFRSTRNAYDRECEVFHDFNP
                     SDNTGHPEKPKNTKFACPVPSCRAAG"
     gene            3463..3861
                     /gene="msrB"
                     /locus_tag="QF359_04790"
     CDS             3463..3861
                     /gene="msrB"
                     /locus_tag="QF359_04790"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HJO86256.1"
                     /translation="MADKITKSDIEWQKQLTPEQYYITRQKGTERPFTGEYNDSKTPG
                     TFECICCGAPLFASDHKFDSGSGWPSYWQPVSEDSVISETDNSLGMVRIEVMCARCDG
                     HLGHVFPDGPQPSGLRYCINSLSLKLNEKD"
BASE COUNT          978 a         1015 c         1030 g          921 t
ORIGIN      
        1 gccatggtgg ccgagggttg tatgcggctt agccgggaag caagtattga atctgccatg
       61 gttatattca gcctttaaac cgtacggagt tgaaaattcg gcggcaccct acgccgcaac
      121 ataacgggat gcaataccag aaaacggcat aaaatcgaac cccttaatga caatcaagga
      181 gcttaaaata ctaacgggag aaacggttgc cccatgcacc atttctcccg tcaggtggtc
      241 tgtgcgacaa ggggggggga tttttttgcc gctcatccca taaatagtac tgctgaatga
      301 aaatcattcg cattaccata acagatatat gctatcaccc agaaaattag tcaagtttat
      361 tggcaggttt ttcttactaa taaccacaca aaatataatg ttttaggact ttttcttttg
      421 gccgataaag agacgggatg cttttcatga agcgtcacga tatgatgaca tgatgcagca
      481 acgtatacct gatgatattt attttatccc gcccaaacgc ccggtgattg aagccggtga
      541 cctgctcaag gtcgtctccc tctatgaacc agcgggcgat caaccggaag ccatcaagga
      601 actggtcgat ggcattcggg ccggtgacaa agatcaggtg ctgcttggcg tcaccggttc
      661 gggaaagacc ttcactattg cccatgcggt ccaggaacta aatcgtccga ccctcgtgct
      721 agcaccgaac aagacgctgg cggcgcagct atatggcgag atgaaagagt tcttcccgga
      781 aaatgcggtc gagtattttg tttcttatta tgactactat cagcccgaag cctatgtgcc
      841 ccgcaccgac acctatattg aaaaagatgc ttcgatcaat gagcagatcg accgcatgcg
      901 tcattcggct acgcgggcac tgctggaacg cagcgacgtc atcatcgtcg cctcggtttc
      961 ctgcatctat ggtatcggcg cggttgaaac ctatgctcag atgaccgaaa aactcgaacc
     1021 cggccagacc gtcgaccgca ataatctgtt gaagcgccta gttgagttac aatatacccg
     1081 caacgacatg gcgttttacc ggggcacctt ccgggtacgc ggcgatgtcg tcgagatttt
     1141 cccctcgcac ctggaagacc gggcctggag attgtcgtta ttcggcgatg agctcgaagt
     1201 aatttgggaa attgatccgc taaccggaga aaaaatagat accttgccgg aagtcacggt
     1261 gtacccctcc tcccactatg tgacgcccag gccaacgctc ctccaagcga tcccacagat
     1321 taaagaggag atgaaacagg tcgtcgccga ttttgaaaaa gagggtaaat tgctggaggc
     1381 gcagcgcatt gaagagcgca ccaccttcga tattgaaatg ctcgagacta ccggacattg
     1441 ctctggcatt gagaactact cccgctatct caccggccgc aatcccggtg agccgccgcc
     1501 caccctgttt gaatatttgc cggaaaacgc cctcatcatt ttggatgaaa gccacgttac
     1561 ggtgccgcaa ttgggcggta tgtatcgggg tgactttgcc cggaaatcca cgcttgccga
     1621 gttcggcttc cgcctgccgt cttgcgtcga taaccggccg ctcaaattcg aggaatggga
     1681 agccatgcgc ccgcaaacga tctttgtctc ggcgacgccg ggcccgtggg agcttgaaca
     1741 aaccagcggc gtttttaccg aacaagtggt ccgcccgacc ggcttgattg acccgctttg
     1801 cattgtccgc ccagtagcga cgcaagtcga tgatctcttg gccgaatgcc gggaggttgc
     1861 actgaacggc cagcgcgtgc tggtaacgac cctgaccaaa cggatggccg aggacttgac
     1921 cgaatacatg catgaggccg gcattcgcgt gcgctacttg cactcagata tcgacaccct
     1981 ggagcgcatc gaaattattc gtgatttgcg gctcggcgcc tttgatgtgc tgatcggcat
     2041 taacctgttg cgcgaaggct tggatattcc ggaatgcgcg cttgtcgcta tcctggatgc
     2101 cgataaagaa ggtttcctgc gctccaaaac ctcgctggtg cagacgatcg gccgggccgc
     2161 ccgcaacatc gatggccggg ttattcttta tgccgataaa atgaccgata gtctggaata
     2221 cgccattggc gagaccaacc ggcggcgtgc caaacagcag acctacaatg acgagcacgg
     2281 catcacgccg gaatcggtca aaaaaggcat ctcggatgtt ctcgaaagcg tctatgaaat
     2341 ggattatgtc actgtcgata ccggtgtttc cggcgatact gagcttgtcg gcaaccaata
     2401 ccagacccac atcgatgatc ttaatgcgcg gatgatcgac gccgccgcaa atcttgaatt
     2461 tgaggaagct gctagaattc gagatgaaat cagacgtttg gaagcgatcg agcttggatt
     2521 gggcaaaccc ggtgtctcca aactcgccgc cgctcaggcg ggcctgaaca aatcgagaat
     2581 gccacaaaag aaaatgcagc agtacggcgg caccaagatg aataaacgta agaaaaaaag
     2641 acggcggagg gtttaggaaa ttagaagata gcttaagccg tcatgcgcgg atgtaatccg
     2701 cgcatccaat ttaaatgaat gatgctagat ggatacgccg gtaaagactg cgtatgacgc
     2761 tggtagcata atcatcaccc cgggcttgac ccggggtcca gttttctatg ggcgggggaa
     2821 tccacactta ctatcctggg atagggaggg tttctgtatt ttctgtgtcg tctgtcgttc
     2881 tacatccact taacatcgta agctgagaca ccttaggcga tcgaagatta ggatgagcgt
     2941 gcagggcaaa aagatgtccc cgtatttcaa atctaccccg ctgcccgaca gctcggtacc
     3001 gggcaggcga atttggtgtt tttgggcttc tccgggtgcc cggtgttatc gctgggattg
     3061 aaatcgtgaa aaacctcaca ttcccggtca taggcgttac gggtggagcg gaaaaattta
     3121 aagcggaagc ctttatattt accaatatgt tttctaagct cgccgccgag atcaccatcc
     3181 acgtggcgga cataacggat gacaaaacgc ggtttgccgt cagcgccttt gcggatactg
     3241 cccaacacat aaacactcgc tgagctccag tcggtaccat tatcgatgtg ctctttgatg
     3301 gttacctcat cgagtggcag tggcttacca aggttggatt ttaaaacttt ttctgtcatg
     3361 tgtgattcta tcttcaagat attccgtctc ttttgcaagt ctgtttgtct cactggtact
     3421 ggcggagtat cctgcgtatt ggggaatgca tgaggaatta aaatggccga caaaattacc
     3481 aaatccgata tcgaatggca gaaacagctg acgccggagc aatactacat cactcgccag
     3541 aaaggcaccg agcgcccatt taccggcgag tataacgata gcaaaacccc aggcactttc
     3601 gaatgcattt gctgcggtgc tccgctgttt gcttctgatc acaagtttga ttccggttcc
     3661 ggctggccaa gctattggca gccggtcagc gaagattcgg ttatatcaga aaccgataac
     3721 agcctcggca tggtgcggat cgaggttatg tgtgctagat gtgacggtca cttgggtcat
     3781 gtcttcccgg acggccctca gccgtcgggt ctacgctact gcatcaattc attgtcgctc
     3841 aagctcaacg agaaagacta gagcgccgcc accgatgtct aaaaacattc gcgcgatctt
     3901 gctcatgact gtgtcggtcg gcatgctggc cgcccttgac ggca
//
LOCUS       DASCNL010000355         2340 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000767833, whole genome shotgun sequence.
ACCESSION   DASCNL010000355 DASCNL010000000
VERSION     DASCNL010000355.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000767833"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1175)
                     /locus_tag="QF359_04795"
     CDS             complement(<1..1175)
                     /locus_tag="QF359_04795"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HJO86257.1"
                     /translation="MTDGWTISSFVIAVLVAIPILTVIGLAILPEENIWQHLASTVLP
                     RYIRTTLGLMIGVGIGTLTIGVGTAWIVTTCNIPGRWIFEWALLLPLAIPAYVIAFLY
                     TDILEFAGPVQGALREFFGWVTPRDYWFPEIRSPGGAIMMMTLVLYPYVYILARATFL
                     EQSHGVLEVSRTLGRGPWQSFFNMALPLARPAIVIGLSLVMMETLNDFGTVDFFAVGT
                     LTLGVFDVWMNMNNVGGAAQIAVLMLFFVMFLIGAERFARRKQRFHHTTSRHKSLPRC
                     EMKGWLGVAAFLACLLPLFFGFLLPVGLLINSAFGHFEEAVGGSFLTSAGNSLMLSGF
                     AAMFALAIGVMLAYGLRLRGGNFLTGVTRFASLGYAIPGAVLAIGVIIPMAWLDNSI"
     gene            complement(1322..>2340)
                     /locus_tag="QF359_04800"
     CDS             complement(1322..>2340)
                     /locus_tag="QF359_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HJO86258.1"
                     /translation="AAAIGVVVSIAVTASSAVQTAEKVNLYSYRQPFLIKPFLDVFAN
                     QTGIKVNVVYAKKGMLQRLKAEGRNTPADAVLTVDINRLSALANAGLLQPIKSSVLEK
                     NVPAQYRHPDGLWFGLTTRARVVYAHKTRVKPGEVASYEDLAKPHMKGRICTRSGKHS
                     YNLSLLASIVAAKGEQAATKWARAVKVNLARRPQGNDRAQVKAIKEGICDVSLGNNYY
                     MGKMATNEKKPEQKTWAAAVNVLFPGQNGRGTHVNISGAAVTEHAKNKANAIKLLEFL
                     SEKFAQKMYADQNFEYPVKSGVAWHSLVASWGKFKADNINLNEIVKHRSTAAKIMDRV
                     DFDG"
BASE COUNT          666 a          601 c          525 g          548 t
ORIGIN      
        1 tcaattgaat tgtcgagcca agccatggga atgatcacac cgatcgctaa gacggcgcct
       61 gggatggcgt aaccgaggct ggcaaaacgg gtcacaccag tgagaaaatt accgccccta
      121 agccgcaatc catatgccaa catcactccg attgctaaag caaacatcgc agcgaagcct
      181 gacagcatca aactatttcc agcgctggtc agaaaactgc cgccaaccgc ttcttcaaaa
      241 tgcccaaatg cactattgat cagcaaccca accggcagta aaaaaccaaa aaataacggc
      301 agtagacacg ctaagaaagc ggcaacgccc agccaaccct tcatttcaca ccgcggcaat
      361 gatttatgcc gggatgtggt atggtgaaag cgctgcttcc gccgggcaaa gcgttcggca
      421 ccaattaaaa acattacaaa aaacagcatc aacacagcga tctgagctgc tcctcccaca
      481 ttattcatat tcatccagac atcgaaaaca ccaagggtca acgtcccgac agcaaagaaa
      541 tccacagtgc caaaatcatt gagcgtctcc atcatgacca atgataagcc gataacgatg
      601 gccgggcggg cgagaggcag cgccatatta aaaaaactct gccatggccc ccgtccgaga
      661 gttctgctga cctctaaaac gccgtgggat tgttcaagaa aagtggcgcg cgccagtata
      721 tagacataag ggtatagtac gagtgtcatc atcataatcg cgccgcccgg agagcgaatt
      781 tctggaaacc agtaatcacg cggcgttacc caaccaaaga attctcttaa tgctccttgg
      841 accggtcccg caaattcaag aatatcggta tataaaaaag caatcacata agctgggatg
      901 gcaagcggca acaacaacgc ccactcaaaa atccagcgac ctggaatatt gcacgttgta
      961 acaatccagg cggtgccaac accgatggtg agggtaccaa taccgacacc aatcattagc
     1021 cctagggtgg tgcgaatata tcgaggtaga accgtcgaag ccaaatgctg ccaaatattt
     1081 tcttccggca agatcgccag accgatcacg gtaagaatag gaatcgccac aagaactgca
     1141 atcacgaagg acgaaatggt ccaaccatca gtcaagaatc gcaacctgct acgggttgac
     1201 tgtccgattt gtgctgtagc ctgacgaacg ttcatattta tttactaact tattcaaaat
     1261 agtaaggagc tgctctcgaa aattaccaaa agcggctctt aaattttagg tcggcggaat
     1321 tctacccatc gaaatcgaca cgatccataa tttttgctgc tgtcgatctg tgtttgacga
     1381 tttcatttaa gttaatattg tcagctttaa atttgcccca agacgccacc agtgaatgcc
     1441 aggcaacacc tgattttacc ggatattcaa agttttgatc ggcatacatt ttttgggcaa
     1501 atttttcact taggaattca agtaatttga tggcattggc tttattttta gcgtgttcgg
     1561 tgactgccgc accgctgatg ttcacgtgag tgccacggcc attttggccc ggaaacaaga
     1621 cattaaccgc agccgcccag gttttttgtt caggtttttt ttcgttcgtt gccatcttgc
     1681 ccatataata gttattgccg agcgaaacgt cacaaatgcc ttctttaatc gctttgacct
     1741 gagcccggtc gttaccctgc ggccggcgag caagattgac tttcacggct ctggcccatt
     1801 ttgtcgccgc ctgctctcct ttggctgcta cgatagacgc taacaaagat agattataag
     1861 agtgcttacc ggaacgagtg caaatacgcc ctttcatgtg aggcttagcg agatcctcgt
     1921 aagatgctac ttcgccgggt tttacgcggg tcttgtgagc atagacgaca cgggctcgtg
     1981 tggttaaacc gaaccacaga ccatccggat gacgatattg agccggcaca tttttttcga
     2041 gcactgagga cttaatcggc tgcaacaacc cggcattcgc caacgcgctt agtcggttga
     2101 tatccacggt cagaacagca tcggcgggcg tattacggcc ttctgcttta aggcgctgca
     2161 acataccctt tttggcatac accacattga ctttaatgcc ggtctggttg gcaaatacgt
     2221 caagaaatgg cttaattaaa aacggttgac ggtaggaata aagatttact ttttctgcag
     2281 tctgaacggc agaactagcc gttacggcta ttgatacaac gacaccgata gcagccgcca
//
LOCUS       DASCNL010000356         3093 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000768352, whole genome shotgun sequence.
ACCESSION   DASCNL010000356 DASCNL010000000
VERSION     DASCNL010000356.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3093)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3093)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3093
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000768352"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(211..1140)
                     /locus_tag="QF359_04805"
     CDS             complement(211..1140)
                     /locus_tag="QF359_04805"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HJO86259.1"
                     /translation="MKAIQIDEFGGPEVLYITDIPEPVPADNEVLVKIYAASVNPADS
                     KVRQGTGPGAGNVTFPYIIGRDFSGVVRAYGKNISEFSPGDAVFGVLPVGSEGTYCEA
                     LAIDAALVAHKPDTLSHSSTAAIVLSGLTSLVSIEDTLKLQAGEKILIHGGAGGVGSF
                     AVQLAHHLGAHVITTASPINHDYLQGLGADEVIDYNAQDFTTVLNDIDVIFDLIGGEV
                     HQRSFKVLKSSGRMAYIAPLLKGASPPREDVTVLRPNVQRDRAHLLRIIDLFEAGVIK
                     APNIQEIPLDDAGAAHDLIDTQHVRGKIVLQIK"
     gene            1258..2652
                     /locus_tag="QF359_04810"
     CDS             1258..2652
                     /locus_tag="QF359_04810"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HJO86260.1"
                     /translation="MANKWSPDSWRKKPILQVPEYPDLAKLEEAEKTLSGYPPLVFAG
                     EARVLKRQLAKVAEGEAFLLQGGDCAESFREFHPDNIRDTFRVLLQMAVVLTFGAACP
                     VVKVGRLAGQFAKPRSDDTETIDGVELPSYRGDIINGIDFIDEKRAPDPERMVQAYNQ
                     SASTLNLLRAFAQGGFADLHRVHQWNMGFVADDKIGERYKDMAERLDESLNFMAACGL
                     MSETAPQLRETEFYTSHEALLLRYEEAMTRIDSLTGEWYDTSAHMLWVGERTRQLENA
                     HLEFLSGIGNPVGAKIGPTTEPDYLIQLIDRLNPENEPGRLTLISRMGADKIEDALPA
                     LVRKVKAEGRSVVWSCDPMHGNTVKASSGYKTRHFDQIICEVEGFFAVHNSEGTHPGG
                     VHFELTGQDVTECVGGAQAITEADLSSRYHTHCDPRLNGRQALELAFAFADRLKEERA
                     NNRATVMKQVVGGI"
     gene            2665..>3093
                     /locus_tag="QF359_04815"
     CDS             2665..>3093
                     /locus_tag="QF359_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO86261.1"
                     /translation="MFEGFHQSDIETDGAVIRTQVGGDGPPLLLLHGYPQTHMMWQNI
                     APRLAEDYTVVATDLRGYGDSSKPETTPDHAPYSFRAMANDQIQVMQHLGFEEFIVTG
                     HDRGARTAHRMALDHQQRITQLALLDIVPTLTLYETADQKV"
BASE COUNT          772 a          761 c          780 g          780 t
ORIGIN      
        1 caataatggc accgtcaggt cccgcctgta ccagatagcg aaacaaatgg agacgggtca
       61 cattgcccag tgccgccaag ctatttgccg cttcaacttg atgtaaattt ttactcatta
      121 ataactatat atctagaaat atagaaatgt caagagatcg gggtaatagt taacaatata
      181 aaaggtgcct ggcacctttt atattgttaa ctatttaatt tgcagtacga tcttaccgcg
      241 cacatgttgg gtatcaatca gatcatgggc cgcgccggca tcgtctaaag gtatttcctg
      301 gatgttgggc gctttgatca caccggcttc aaataggtcg ataatcctca acagatgcgc
      361 ccggtcgcgt tgaacatttg gccgcaagac cgtcacgtct tcgcgcggtg gcgatgcgcc
      421 tttcagcagc ggcgcaatat aggccatccg cccactggat tttaaaacct tgaacgatct
      481 ttgatgcacc tcaccgccaa tcaggtcaaa gatgacatca atgtcgttaa gtactgtggt
      541 aaaatcttgg gcgttgtaat cgatcacttc atctgcaccc aaaccctgta aataatcatg
      601 attgatcggg ctcgccgtcg tgatgacatg cgcacccaga tgatgcgcca attgcacggc
      661 aaaactgcca acaccaccgg ccccgccatg aatgagaatt ttctcgcccg cttgaagctt
      721 caaagtatct tcaattgata ccagtgaggt taagcccgag agcacaatag ccgctgttga
      781 gctatgagac agtgtgtcag gtttgtgggc aaccaaggct gcgtctattg ccagcgcttc
      841 acagtaggtg ccttcactgc ccaccggcaa tacgccaaac accgcatctc ctggcgagaa
      901 ctcgctgata ttcttaccgt aggcccggac aacaccagag aaatcacggc cgataatata
      961 gggaaaagtg acattgcctg cacccggtcc ggtgccttgg cgcaccttgc tatctgcagg
     1021 attaacgctg gcggcgtata ttttgaccag cacttcatta tcggctggta cgggttccgg
     1081 gatatcagtg atgtatagga cctcaggtcc gccaaattcg tcaatttgta ttgctttcat
     1141 aagttttcta cattgcctct tgggtatgcc tttttactgg aatttaagtc cgtttgggcg
     1201 tatagagtgc gccactttaa aaagattatc tacacctggg gataaagtgt aaagacaatg
     1261 gcaaataaat ggtcgcccga tagttggcgc aaaaaaccta tattgcaggt gccggaatat
     1321 ccggacctgg cgaaacttga agaagctgaa aaaacgcttt cgggttatcc gccgctggtc
     1381 tttgccggtg aagcgcgcgt gctgaaacgc caattagcca aagttgccga aggcgaggct
     1441 ttcctgctgc aaggtggtga ttgcgccgaa agtttccgcg agtttcaccc cgataatatt
     1501 cgggatactt ttcgcgtgct gctgcaaatg gctgtggtgt tgacttttgg agcagcctgc
     1561 ccagtggtta aagtcggtcg tttggccggt cagtttgcca agccgcgttc cgacgatacc
     1621 gaaaccattg atggtgttga gctgccgagc taccgcggtg acattatcaa tggtattgat
     1681 ttcatcgatg aaaagcgggc acccgatcct gagcggatgg tgcaggccta taatcagtca
     1741 gcttcgacgc tcaatctttt gcgcgctttt gcccaaggcg gctttgccga tctccatcgc
     1801 gtgcatcaat ggaatatggg ttttgttgcc gatgataaga ttggtgagcg ttacaaagac
     1861 atggctgaac gcttggatga atcgcttaat tttatggctg cttgtggtct gatgtctgag
     1921 actgcgccac aactaagaga aactgaattc tatacatcgc atgaagcctt gctgctgcgt
     1981 tacgaagaag cgatgacccg tattgattcg ctgaccggag aatggtacga cacctcggct
     2041 catatgctgt gggttggcga acgcacccgg caattggaaa atgcccatct cgaattttta
     2101 agcggcattg gcaatccagt tggcgccaaa attggaccta cgacagagcc ggattatctg
     2161 atccaactca ttgatcgcct aaatccggaa aatgaaccgg gacgtctaac gctgatttcc
     2221 cgcatgggag cggacaaaat tgaagacgcg ctaccggctt tggttcgtaa agttaaagcc
     2281 gaagggcgaa gcgtcgtctg gtcatgtgat ccgatgcatg gcaatacagt caaagccagc
     2341 tccggctata agacccgtca ttttgatcaa attatctgcg aagttgaagg cttcttcgcc
     2401 gttcataata gcgaaggcac tcatcccggc ggtgtccatt tcgaattgac cggtcaagat
     2461 gttaccgagt gcgttggtgg cgcccaggcg atcactgagg cggacctttc gagccgttac
     2521 catacccatt gcgatccacg gttaaatggc cgccaagcgc tagaacttgc ttttgccttt
     2581 gccgatcgtt tgaaagaaga acgtgctaat aatagggcaa ccgtaatgaa gcaggttgtt
     2641 ggcggtattt aggatcaacc caaaatgttt gaaggttttc atcaatccga tattgaaacc
     2701 gacggcgccg ttatacgcac tcaggttggc ggtgatgggc cgccgttgct cctgctgcac
     2761 ggctacccgc aaacccatat gatgtggcaa aatattgccc cgcgtttggc agaagattat
     2821 acagtcgtgg cgaccgatct ccggggttat ggtgattctt caaaacccga aacgacacca
     2881 gatcacgcac cttattcctt tcgcgccatg gccaatgacc aaattcaagt aatgcaacat
     2941 ttgggttttg aagaattcat tgtcaccggt catgaccggg gtgccaggac cgctcaccgg
     3001 atggcgcttg accatcagca aagaatcacc cagctcgcgt tgttggatat tgtgccgacc
     3061 ttgacgcttt atgagaccgc agatcaaaaa gta
//
LOCUS       DASCNL010000357         1115 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000770336, whole genome shotgun sequence.
ACCESSION   DASCNL010000357 DASCNL010000000
VERSION     DASCNL010000357.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000770336"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..713)
                     /locus_tag="QF359_04820"
     CDS             complement(<1..713)
                     /locus_tag="QF359_04820"
                     /inference="COORDINATES: protein motif:HMM:NF024877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HJO86262.1"
                     /translation="MGTIDISGAEPASRRRREGMESPRAKASPFMNRMPSSAKRMTFI
                     RQSSLFKQREAPVNPNVTEIDDQAALTAEIKRLAKDMGVDAIGIAEYVPTVRFEDAEE
                     LEHNWVIVFAMTMAYDYMVDIGPNSQNEVHRVYHALDDIGVRLSQQIGAYGYKTRTEP
                     NIADFPLPAYAWLAGLGELGKHGSLISPELGSSFRLGAIATDMPLLVDGPEDYGINEV
                     CTNCQVCARFCPGDAITHE"
     gene            882..>1115
                     /locus_tag="QF359_04825"
     CDS             882..>1115
                     /locus_tag="QF359_04825"
                     /inference="COORDINATES: protein motif:HMM:NF012610.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HJO86263.1"
                     /translation="MGNAELKKTNQSWAPVRANSVANQIVMQVREALFSGKFQPGDLL
                     GSEKDLAAQFDVSRITVRDALRTLETMGIVEIRV"
BASE COUNT          272 a          263 c          289 g          291 t
ORIGIN      
        1 ttctcatggg tgatggcgtc gccagggcaa aagcgggcgc agacttggca atttgtgcag
       61 acttcgttga tgccgtaatc ctcgggccca tcaacgagca gcggcatatc ggtggcaatc
      121 gcaccgagcc ggaaggatga gccgagttct ggcgatatta gcgaaccatg cttgcccagt
      181 tccccaagtc cggccagcca ggcataagcg ggcagcggga agtcggcgat attgggttcg
      241 gtgcgggttt tatagccata ggcgccaatc tgctggctca accggacacc gatatcatca
      301 agcgcgtgat agacccggtg aacttcattt tggctgttcg gacctatatc aaccatgtaa
      361 tcataggcca tcgtcatggc aaaaacgatg acccaattat gttcaagctc ttcggcgtct
      421 tcaaaacgga cggtcggtac gtactcagcg attccgatgg catcgacccc catgtctttg
      481 gccaaccgct taatttctgc ggtcaaggcg gcttggtcat caatttcagt gacgttggga
      541 ttaaccggtg cttcacgttg tttgaacagc gatgattggc ggataaaggt catacgcttt
      601 gccgatgacg gcatgcggtt cataaaaggg gaagctttgg cccgtggtga ttccatgcct
      661 tcccggcgac gtcgtgacgc tggttcagcg cctgaaatat caatggttcc cattgcggtg
      721 atcctcagtt ccctgtttta acttacggcg aatatatgtt ttccgctcta ttattgtagt
      781 ctatttatta ataacaatgt tgacgagttg tcgcaaagtg ttctaattgt tatatcattt
      841 tttaaaaaga aaaatagact gaaaatgaaa aatattccgc aatgggaaat gcagaactga
      901 agaaaacaaa ccaatcttgg gctcctgtgc gcgctaattc agttgcaaac caaatcgtca
      961 tgcaggttcg cgaagcactg ttcagcggca aatttcagcc cggtgattta ctcggttctg
     1021 aaaaagatct cgctgctcaa tttgatgtca gccgtatcac ggttcgcgat gctctgcgga
     1081 cgctggagac aatgggcata gttgaaattc gtgtc
//
LOCUS       DASCNL010000358         1088 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000773933, whole genome shotgun sequence.
ACCESSION   DASCNL010000358 DASCNL010000000
VERSION     DASCNL010000358.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000773933"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="QF359_04830"
     CDS             <1..741
                     /locus_tag="QF359_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO86264.1"
                     /translation="KPVGGYTETILRVIDVMFQVISKVAPDMTNGCAYGTINALSMAG
                     YRKNGARWVMFSFFGGGHGGHPLGDGLNHGNAPISTATIPPLEILEAAYPVRFTQWAL
                     RPDSGGSGRNRGGCGAIYEIELLEEKADAFLFGERGKYAPAGVVGGKSGALNEFYYPD
                     ENGADTSPPMVSKMVGIHLDQGQRVRLETPGGGGYGDALERNPKQVAEDVRLGYVTAE
                     AAAKDYKCAVSNDGVLDEKKTTQLRGEA"
     gene            745..>1088
                     /locus_tag="QF359_04835"
     CDS             745..>1088
                     /locus_tag="QF359_04835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HJO86265.1"
                     /translation="MANNQTVVGVDVGGTFTDVFFLNETDGSCNVAKVPSTRNDQSVS
                     IRDGISQRRDNLSEVSLIIHGTTVGTNALLERKGAKTGIITTKGFRDVIEMRRRDRPE
                     TWGLWGMFEPVVP"
BASE COUNT          255 a          291 c          306 g          236 t
ORIGIN      
        1 aaaccggttg gcggttatac cgaaaccatt cttcgcgtca ttgacgtcat gttccaggtg
       61 atttctaagg tggcacccga tatgaccaac ggctgcgcct atggcaccat caatgcgtta
      121 tcaatggcgg gttaccgcaa gaacggtgcc cgctgggtga tgttctcgtt tttcggcggc
      181 ggtcatggcg ggcatcccct gggcgatggc ctcaaccacg gcaatgcacc aatatcgaca
      241 gcaaccattc cacccttgga aattctggaa gccgcttacc cggtgcgctt cactcaatgg
      301 gcattacgtc ccgatagcgg cgggtccggc agaaaccgtg gcggttgcgg cgcgatttat
      361 gaaatcgagt tgctcgaaga aaaagccgat gcctttctgt ttggtgagcg cggcaaatat
      421 gccccggccg gtgtcgtcgg cggcaagagt ggcgctctca acgaattcta ttatccagat
      481 gaaaacggcg ctgatacctc tccgccgatg gtctcaaaaa tggtgggcat ccatctcgac
      541 cagggccaac gggttcgctt ggaaacccca ggcggcggcg gttatggcga tgcgttggaa
      601 cgtaatccta aacaagttgc cgaagatgtc cgactgggct acgtcacggc cgaggcagcc
      661 gctaaagatt ataaatgtgc cgtctccaat gacggtgtcc tggacgaaaa aaaaaccacg
      721 cagttgcggg gagaagctta aactatggcc aacaatcaaa cagttgtcgg cgtcgatgtt
      781 ggcggtacat ttacggatgt ttttttctta aacgaaacgg atggctcctg caacgttgcc
      841 aaggtgccct caacccggaa tgaccaatcg gtaagcatcc gtgacggtat cagccagcga
      901 cgggacaatc tttccgaagt ctcactcatt atccatggca cgaccgtcgg caccaatgcg
      961 cttctggaac gcaagggtgc caagaccgga atcatcacga ccaaagggtt tcgagatgtc
     1021 atcgaaatgc gccgtcgtga ccggcccgag acttggggcc tttggggaat gtttgaacct
     1081 gtagtacc
//
LOCUS       DASCNL010000359         6153 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000774531, whole genome shotgun sequence.
ACCESSION   DASCNL010000359 DASCNL010000000
VERSION     DASCNL010000359.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6153)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6153)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6153
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000774531"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="QF359_04840"
     CDS             complement(<1..914)
                     /locus_tag="QF359_04840"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJO86266.1"
                     /translation="MSDTQQASDFGINRIGQAFLDDPFPTYKLLRKNDPVHLNPDGSY
                     FLTRYDDVVQSFRHPAMSSDKKVDFKPKFGDGPLYVHHTNSLVFNDPPIHTRVRQLLS
                     EAFTPRKLAELEPVIEGIIDRLLDRLADQGQFDVINDYALALPTEIIADMLGVPEEHR
                     HKLHNYSNLILGALDPVVSPEKIAEGHAAVEEFGALLEELIAERRTTPEGGEMGEVLA
                     ALIFGEIDGDKLTPVELVQNCIFLLNAGHETTANLVGNGISILLDYPYQLQRLRDDPS
                     LIKSAVEEFLRFQSPLQIGNRKATEGVE"
     gene            complement(929..3895)
                     /locus_tag="QF359_04845"
     CDS             complement(929..3895)
                     /locus_tag="QF359_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO86267.1"
                     /translation="MKFSFILWGLSWLLKVTAWRHVSFKARLKEKNLIAQIKIADDSR
                     GRIFIFKDGKVTSKAGIHPEPDICLAFKSAEIAVELLIPPVDYQQQIDAQKEFNLTMT
                     GDDADAYWFAQTIMLTQNIDWKFGTTLPDGTQRFTSNTNGGPIFVYVKDDKIIRITPI
                     EFDDTDPGTWTIEVRGKSFTPPRQSSLSPHGQNWKSMVYSPDRILTPLKRVDFDPNGV
                     RNPQNRGKSGYESISWDEALDIVASEIQRVKRDYGPGSMASSHGSHHTFGNIGYYLSA
                     NFRFMNLVGHTEIHHNPDSWEGWYWGGLHHWGHSLRVGMSENYGTVEDLMKHCEMIVF
                     WSSNPEATSGNYGSHEGSIRRQWLKELDVDFVHIDPFYNDTAQMLGGKWLAPKPQTDP
                     AMALAIAYVWITEELYDKDYVAKRTEGFDKWRAYVLGEDDGIPKTPEWQAEETGITAK
                     EIRALARAWGNKKVYLSAGGAGNGYGGACRNATGIQWSRMMICLMAMQGIGKPGVNLG
                     NMQRATPLDLHFYFPGYADGGISGDLTGTALAVALYQRMPQLPTINTSTQKIPRLHMP
                     EAIAGETVEGYAWDGKSIEGQFNKIVYPKQGQAPVRMLYKYGSSMFGTMSDTNRYVKM
                     YNLENLEFVVNQSIWMEGDTPYADIILPACTHLERPDISEWAGIGGYTHHGQNQLNHR
                     VITFQHKCIEPLGESKSDYQIFLEIAQRLGLSLLFSEGMSELDWAKRQFDASDLPKHI
                     SWKKFIRKGYFVVPPLKEELRPPVSFRWFAEGKKKDVPEPHPLPADYTEEFLKGLQTQ
                     SGKIEFECNSLKRFDAEDSERPPLPRYQPSWEGPDDKERFAKYPLQMLTPHARYSYHS
                     QGDGKDTFLNDIVDHRIEIDGRYYWTLRINDQDAADRGIKKFDLIKAHNERGAVVCAA
                     FPTNRLARGVLHGYESCAIYDPLGEPGNSVDRGGCLNQLTPRRMQIKQSHSMATAAAL
                     VEVEIWDGGSELVAAE"
     gene            4020..4481
                     /locus_tag="QF359_04850"
     CDS             4020..4481
                     /locus_tag="QF359_04850"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HJO86268.1"
                     /translation="MRNGAPKDPESFHLEDFIPYRLAVLAKAVSTAFAKTYAERFGIT
                     IPQWRVMSAIGRAPNCSASSIVEHTALDKVQVSRAVAGLIDIGHVERRADEKDRRNSV
                     LNFTKQGLDIYEQIVPAGRAFEERLMSVMSSADIDELDHLIDKLMSQVKEL"
     gene            complement(4531..5430)
                     /locus_tag="QF359_04855"
     CDS             complement(4531..5430)
                     /locus_tag="QF359_04855"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO86269.1"
                     /translation="MEAWILFTVAAAFLQNLRNGLQKSINAVLSTTGAAYTRFAFGLP
                     LAIIYWIMLRYLIDDALNWGWLFWLYAFIGGTAQILAMVSLLRAFSLRGFAVGTAYAK
                     TETLQTAIFTVILLGEAVSQSVLIAIFVSLAGVLMLSSAKSSASMKDILFSWTEKAAL
                     FGLASAALLGLSAVSYRGAALAMEGEGALLPAASTLVVALAIQTVIMTPYLALKEKDE
                     LKRIWQNRSKAMLVGIASMLGSVGWFTAMTLQNAAYVRALGQIELIFTFLTSVLIFRE
                     RINRAEIGGTLLIVGGVLILLLT"
     gene            complement(5712..>6153)
                     /locus_tag="QF359_04860"
     CDS             complement(5712..>6153)
                     /locus_tag="QF359_04860"
                     /inference="COORDINATES: protein motif:HMM:NF013866.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJO86270.1"
                     /translation="HAGLEGTQFAENMIQLFAHSGYLCVVPFIFHRFPLKKVRQEKRA
                     SFDDKEIHADQETAYQWLISNENIDSDSIGIYSNDDGNPSPEDADAEEQALIAAGIEY
                     EFHRYDGAGHAFMNPTSSRDPDPYRYQASEDSRNKQLAFLARHL"
BASE COUNT         1532 a         1610 c         1519 g         1492 t
ORIGIN      
        1 aactcaacgc cttccgtagc tttgcggttg ccgatttgca ggggtgattg gaaccgcaaa
       61 aactcttcga ccgctgactt gatcaggctc ggatcatcgc gtagacgctg caattggtat
      121 gggtagtcga gcagaatact aatgccatta ccaaccagat tagcagttgt ttcatgcccg
      181 gcattgagca ggaaaataca attttgcacc agttcaacag gcgtaagctt gtcaccgtca
      241 atttcgccga aaataagtgc agccagcacc tcacccattt cgccgccctc tggtgtggtg
      301 cgacgctcgg caatcagctc ttccaacagc gcgccaaact cttcaacggc agcgtgaccc
      361 tcggcaattt tttccggcga gaccaccgga tcaagggcac ctaaaatcaa attggaataa
      421 ttgtgtagct tgtggcggtg ttcttccggc acacccagca tatcggcgat gatttcggtc
      481 ggcaaagcca gcgcataatc attgatcaca tcaaactggc cctggtctgc cagccggtcc
      541 aacaaacggt caataatacc ttcaatcacc ggttccaatt ccgcaagttt gcgcggcgta
      601 aaggcttcgg agagcaactg gcgcacccgg gtatggatcg gcggatcatt aaataccaaa
      661 ctgttagtgt gatgaacata gagcgggccg tcgccgaatt tcggcttaaa gtcgactttt
      721 ttatccgaac tcatcgccgg atgacggaag gactggacga catcatcgta gcgggtcaga
      781 aaataagagc catccgggtt aagatgcacc ggatcatttt tgcgcagcag tttgtaggtt
      841 ggaaacggat catccaaaaa agcttggccg attctattga tgccaaaatc tgaagcttgt
      901 tgcgtatcac tcactgatat ctcttccctt attctgccgc gacgagttca ctgcctccat
      961 cccaaatctc aacttcaacc aatgcagcgg cagtcgccat cgaatgagat tgtttgattt
     1021 gcatgcgccg cggcgtcaac tggttaagac aaccaccccg gtccactgag ttccccggct
     1081 cgcccagtgg atcataaatg gcgcaggatt catagccatg caacacaccc cgtgccaatc
     1141 gattagtcgg aaaagccgca catacgacgg cgccgcgttc attgtgggct ttgatcagat
     1201 caaatttctt aatgcctcga tctgccgcgt cctgatcatt gattcgcagc gtccagtaat
     1261 aacggccatc tatttcgatc cgatgatcga cgatatcatt gagaaacgta tctttgccgt
     1321 cgccttgact gtgatagctg tagcgcgcat ggggcgtcag catttgcagc gggtatttgg
     1381 caaagcgctc tttatcatca ggcccttccc agctgggctg gtaacgcggc agtggcgggc
     1441 gttcggaatc ctccgcatca aagcgtttta aagaattaca ctcaaactcg attttacctg
     1501 actgagtttg caggcccttc aaaaactctt cggtgtaatc tgccggcaat ggatgcggct
     1561 cgggcacatc tttcttttta ccttcggcaa accagcggaa cgacaccggc ggtcgcagct
     1621 cttccttcaa gggcgggacg acgaaatagc ctttcctgat gaatttcttc cacgagatat
     1681 gcttgggtaa atcggaagca tcgaattgac gtttggccca atccaactcg ctcatacctt
     1741 cggagaatag caggcttaac cctaagcgct gagcgatctc taaaaatatc tggtagtcgg
     1801 atttagactc gcccagcggc tcaatacatt tatgctggaa agtgatcacc cggtgattaa
     1861 gctggttctg tccatgatgg gtgtagccgc caatgcccgc ccactcgctg atatccggcc
     1921 gttctaaatg ggtacaagcg ggcaaaatta tatcggcata gggcgtatcg ccttccatcc
     1981 aaatcgactg attgacgacg aattcaaggt tctccaaatt gtacattttg acgtagcggt
     2041 tggtgtcact catggtgccg aacatcgacg agccatattt atacaacatc ctgaccggtg
     2101 cctggccctg cttggggtaa acaattttat tgaactgacc ctcgatgctt ttgccatccc
     2161 aggcataacc ctcgacagtt tcaccagcaa ttgcttccgg catgtgaaga cgggggattt
     2221 tctgggttga agtgttgatg gtcggcaatt gcggcatccg ctgatagagc gccaccgcca
     2281 gtgctgtccc ggtcaaatca ccggaaatgc cgccatcggc gtagcccgga aaatagaaat
     2341 gcagatcaag cggcgtggcg cgctgcatgt taccgagatt aacaccgggc ttgccaatcc
     2401 cctgcatcgc catcaggcaa atcatcatgc gcgaccactg aataccggta gcattgcggc
     2461 aggcgccgcc atagccgtta ccggcaccgc cggctgacag ataaactttt ttattgcccc
     2521 aggccctcgc cagggcgcgt atttctttgg cggtgatgcc ggtttcctct gcctgccatt
     2581 ccggtgtttt ggggatgccg tcatcttcgc ccaaaacata ggcgcgccat ttgtcaaaac
     2641 cttccgtgcg cttggcgaca taatctttgt cgtaaagctc ttcggtaatc cagacataag
     2701 cgatcgccag ggccatggcc ggatcagttt gcggtttggg agcgagccat ttgccgccca
     2761 gcatttgcgc cgtatcatta tagaacggat cgatatgaac aaagtcgaca tcaagttctt
     2821 tcagccattg acggcggatc gagccctcgt gcgagccata attgccgctg gtagcttccg
     2881 ggttgctcga ccagaacacg atcatctcgc aatgtttcat gaggtcttcg acggtgccgt
     2941 aattttccga cataccaacc cggagactgt gcccccaatg atgcaaaccg ccccagtacc
     3001 atccctccca actatcggga ttatggtgga tttccgtatg gccgaccaaa ttcatgaaac
     3061 ggaaattggc gcttagatag tagcctatat tgccaaacgt atggtgggag ccgtgcgatg
     3121 aggccattga acctggtccg taatcccgtt ttacccgctg gatttcacta gcgacgatat
     3181 cgagcgcctc atcccagctg atcgactcat agcctgattt accacgattt tgtggattgc
     3241 gtacaccgtt agggtcaaag tcaacgcgtt tcaagggtgt caggatacgg tccggcgaat
     3301 agaccatcga tttccagttc tggccatgag gcgagagtga gctctggcgc ggcggtgtga
     3361 agcttttacc acgcacttca attgtccagg tgcccgggtc agtatcatca aattcaatcg
     3421 gcgtgatgcg gataatttta tcgtctttga cataaacgaa gattggcccg ccattagtat
     3481 tactggtaaa acgctgggtg ccatccggca gcgtggtacc aaatttccaa tcaatatttt
     3541 gcgtcagcat aattgtctgg gcaaaccaat aggcgtcggc atcatcgccg gtcatggtca
     3601 aattaaattc tttctgcgca tcaatctgct gttggtagtc gaccggcggt atcagcaact
     3661 caacggcaat ctcagctgat ttgaatgcca ggcaaatatc tggctccggg tggatgcccg
     3721 ctttggacgt caccttgcca tctttaaata taaagatacg gccgcggcta tcgtcggcga
     3781 ttttaatctg ggcgatcagg tttttttctt tcagccgtgc cttgaacgac acatgacgcc
     3841 aagcggtcac tttcagtaac cagctgagtc cccatagaat aaatgaaaat ttcatattaa
     3901 tagtccaaat ctgtcactac tacgttatcc aaatcatttt ccgttcccta ttgatttaat
     3961 aatttatttt gtaaataata gtttcaattg caactaaatt caattagaat ctttttatta
     4021 tgagaaatgg cgcaccaaaa gaccctgaaa gcttccatct cgaagatttt atcccctatc
     4081 gcctggcggt tttggccaaa gcggtgagta cggcgtttgc caagacttat gctgagcgtt
     4141 tcggcattac catcccgcaa tggcgggtga tgtcagcgat tggacgagca cccaattgct
     4201 cagcctcaag tatcgttgaa catactgcac ttgataaagt tcaggtcagc cgggcggtcg
     4261 ccggtcttat tgatatcggc catgtcgaac gccgggcgga tgaaaaagac cggcgcaact
     4321 ctgttctgaa tttcactaag cagggcctag atatctatga gcagatcgta ccggcgggcc
     4381 gcgccttcga agagcgcctg atgtcggtga tgagttcagc agatatcgac gagctcgacc
     4441 acctgatcga taagctgatg tcgcaggtga aagagcttta aaaagtcaat ttttcaaaag
     4501 gtgccaggca cctttatttt tgttaacttt ttacgtcagc agcagtatca gcacgccacc
     4561 gacaatcagc aatgtaccgc cgatttcagc cctattgata cgctcgcgga atatcagcac
     4621 cgaggttaaa aacgtaaaga tcagttcgat ctgaccgagg gcgcgcacgt aagctgcatt
     4681 ttgtaatgtc atggcagtaa accagccgac actgccaagc atcgaagcga tcccgaccag
     4741 catcgctttc gagcggtttt gccaaattct cttgagttcg tctttttctt taagggcgag
     4801 ataaggcgtc attatgacag tctgaatggc gagcgccacc accagggtcg aagccgccgg
     4861 cagaagcgct ccctcacctt ccatcgccaa agccgcacca cggtaagata ccgccgaaag
     4921 gcccaacaat gctgccgaag ccaagccgaa taaagcggct ttctcagtcc aggaaaatag
     4981 tatgtctttc atgctggcgc ttgattttgc actcgacaac attaagacgc cggccaaact
     5041 gacaaaaata gcaatcaaga cggattgcga taccgcctcg cctaataaga tcacggtaaa
     5101 tattgcagtt tgcagggtct cggttttggc ataagccgtg ccgacggcaa agccgcgtaa
     5161 tgaaaaggcg cggagtagcg acaccatggc gaggatttgt gccgtgccgc cgataaaggc
     5221 atagagccag aacagccagc cccaattgag cgcatcatcg attaaatacc ggagcatgat
     5281 ccaatagatg atggcgagtg gcaggccaaa ggcaaagcgc gtataagccg cgcccgttgt
     5341 cgacagtacg gcattgatcg atttctgcaa cccgttacgt aaattttgca gaaaggccgc
     5401 cgcgacggta aagagtatcc aagcttccat agaggcgttt aaggcagata aacgccgcgt
     5461 ttggcaagcg cttcttcaat taacctctgg atcgcgccaa gatatttggc catcaatttg
     5521 acagcggcgg caaattcgac cacctaaaaa tacggcagca gacaccagga cgtaatgaag
     5581 gcagtcaaga aaaaggccct tttacagaaa ttgccggtgc accattatac ccaactgcac
     5641 gaccccatag gcaatcatgc cgaaaatcac ggcgtagaga ataacgcgga gatgggtttt
     5701 gagccgatcc actaaagatg tctcgccaga aacgccagtt gcttgttccg ggaatcctcc
     5761 gaggcttggt agcggtaagg atcaggatcg cggctggaag tcgggttcat aaatgcgtgc
     5821 cccgcgccat catatcgatg aaactcatac tcaatgccag cagcgataag cgcctgctcc
     5881 tcggcatcgg catcctcggg tgatggattg ccatcatcat tgctatagat accaatgcta
     5941 tcactgtcga tgttttcgtt ggagatcagc cattggtagg cggtttcctg atcggcatga
     6001 atttctttgt catcaaagct cgcacgcttt tcctggcgga ccttcttcag cggaaaacgg
     6061 tgaaatatga aaggcacaac acaaagatag ccgctatggg caaagagttg gatcatgttc
     6121 tcagcgaatt gggtgccttc gagcccggca tgg
//
LOCUS       DASCNL010000360         1973 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000779950, whole genome shotgun sequence.
ACCESSION   DASCNL010000360 DASCNL010000000
VERSION     DASCNL010000360.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1973)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000779950"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..286)
                     /locus_tag="QF359_04865"
     CDS             complement(<1..286)
                     /locus_tag="QF359_04865"
                     /inference="COORDINATES: protein motif:HMM:NF015366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HJO86271.1"
                     /translation="MKSLKYVFVGMVAAALMMAGQAKAEWPEKSIEFVIPFGAGGGAD
                     IEGRLIAKAMSKELGQPVVPVNKPGGGCAITYTYVKNSKPYGYTIAWNSTS"
     gene            complement(347..790)
                     /locus_tag="QF359_04870"
     CDS             complement(347..790)
                     /locus_tag="QF359_04870"
                     /inference="COORDINATES: protein motif:HMM:NF015862.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HJO86272.1"
                     /translation="MPFAATKRLTNAGAKKMMTAAIGKAGEIGIAVTVAIVDAGGHMM
                     MLERMDGGRFHTVHSSTTKAVTASSNRRQTTTHGAQGQDLDTLHAIGLSLAAGPERWT
                     AMEGGFPIFFEEECVGGIGVSGGDWQQDQDIAQAAVDAVGASYQS"
     gene            946..1743
                     /locus_tag="QF359_04875"
     CDS             946..1743
                     /locus_tag="QF359_04875"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HJO86273.1"
                     /translation="MNIAPPKSGRTIQSVARALNILEVLSKAEGEMQLGEIARETELN
                     VSTCHHILLTLMTRGYVAQNNRGRAYFLGTKILELSSNRARQFSLAELAMPELRRLNR
                     VTGENVHLAVIQGNDLVALAQLDSTKIVQVNMEAISLTGAAHATAIGKSILAWLPENE
                     IERIIRQKGLPQFTRSTITDFDALKESLRLVRRFGFAIDREEFLPGVVCIGTALRDYS
                     GTVLGSISCTLPDSRAADENIEIVKQAVLDCVAILSSKLGRPKGDSV"
BASE COUNT          506 a          479 c          461 g          527 t
ORIGIN      
        1 cagatgtgga attccaggca atcgtataac cataaggttt agagtttttg acataagtgt
       61 aggtgatcgc gcatccacca ccgggcttgt tgaccggcac aaccggctgg ccaagttcct
      121 tgctcatagc cttggcaata agacggcctt cgatatcagc accgccgccg gcaccaaatg
      181 gaataacaaa ttcgatagat ttttctggcc attcggcttt agcttgaccg gccatcataa
      241 gcgcggctgc taccattcct acgaatacat atttcagact tttcattata acttctccct
      301 tatgtgacta ttttgattta aaaccccgtt gaattaattt tcaattttaa ctttgatagc
      361 ttgctccgac cgcgtcaact gctgcttggg cgatatcctg atcttgttgc caatcaccgc
      421 cgctgacgcc aatgccgccg acgcattctt cttcaaagaa aatcggaaat ccgccttcca
      481 ttgcagtcca gcgctctggt cccgcggcta aagataggcc gatggcatga agagtatcca
      541 aatcctggcc ttgcgccccg tgggttgttg tttgacggcg atttgaagag gcggtgaccg
      601 ccttggtcgt tgaggaatga actgtgtgga agcggccacc atccatacgc tccagcatca
      661 tcatgtgacc gccagcatca acaatagcaa cggtgacggc aatgccaatt tctccggctt
      721 tcccgatggc tgctgtcatc atttttttgg cacccgcatt ggtcagacgc ttggttgcgg
      781 caaaaggcat agttcgtttt cccatggtgt tttgatgatt ttggaaatga taacgtgaag
      841 aaaaccgaac aatcaagtga attctacatt atcataatac ttttcatatt ataaaattta
      901 taatagactt ttttcactat tatacggatg aaattgagcg gaaaaatgaa tatagcgcca
      961 ccaaaatcgg gacgaactat tcagtcggtc gcccgtgcat taaacatctt agaagtgctg
     1021 tcaaaagccg aaggcgaaat gcaactgggt gagattgcgc gcgaaactga acttaacgtc
     1081 tcgacctgcc atcatatttt attaacgtta atgacgagag gttacgttgc gcaaaacaat
     1141 cggggccgtg cctatttcct cggcactaaa atccttgagc tgtcatccaa ccgcgcccgc
     1201 caatttagtc tcgccgaact ggcgatgcct gagctgaggc gtctgaatag agtcaccggt
     1261 gaaaatgtgc atttggcagt tattcagggc aacgatctgg ttgccttggc gcaacttgat
     1321 tcaactaaga tcgtgcaagt aaacatggaa gcaatcagct taactggtgc cgctcatgcg
     1381 acggccatcg gcaaatcaat tctcgcatgg ctgcccgaga atgaaataga acgcattatc
     1441 cgtcagaagg gactgccgca attcacgcgg tccactatca ccgactttga tgcgctgaag
     1501 gaaagcttgc ggctagtgcg gcgcttcggc tttgcaattg atcgcgagga gtttttgcca
     1561 ggtgtcgtct gtatcggcac cgcgcttcgg gactattccg gaaccgtatt gggttcaatt
     1621 agttgcaccc ttccagatag tcgcgcagct gacgaaaaca tcgaaatcgt caaacaagcc
     1681 gtactcgact gcgtcgccat attgtcaagc aaacttggtc gtcccaaggg agattcagtg
     1741 tgaaattagc tacgtttcgt tcaattttcc aaatataggc ctttatttgg cactgtcaga
     1801 ctaagatcac ctttgaccag ctcgcagcat tttcataatg ttaatgtggg gaggaaaacg
     1861 atgtcgacga tacgatattt tctgcattgg tgatgctaac tcaaagctgg tgtataatca
     1921 cagagttaac gtaactgtcc tgccggtgct gtcagacgaa tgcgaactcg tct
//
LOCUS       DASCNL010000361         4048 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000780226, whole genome shotgun sequence.
ACCESSION   DASCNL010000361 DASCNL010000000
VERSION     DASCNL010000361.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4048)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4048)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4048
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000780226"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1124
                     /locus_tag="QF359_04880"
     CDS             <1..1124
                     /locus_tag="QF359_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO86274.1"
                     /translation="NSLLKNAALADCIKIGAEKTDFLTKHAENTAARENPARIRKGIG
                     IATSIHNAGGAKIHKSDGCGTILTMDDYGRATVITGASEIGQGIDAVITQLVSEELGI
                     PTSDVIIANNDSAIGPWDVGVHASRTTFIAGNAARNAAVKAKAQILASAARQSNVSAD
                     KLDLRGGHVVQKDNGVSVTKLDRLLRAMHFAGEDAELVMVSEYYEPPSELEDKSHVGD
                     ISAAYAHGAYITELEVDTLTGGVKLHKMTCVQDVGKVINKLGIEGQMEGGIAQGIGYG
                     LSEELIIEEGIVKNPNFRDYKVVTAPEMPEIECHFIEDDEETGPYGAKGISELPAIIP
                     GASIANAIYNAIGVRFDNPPITPEKIVRALHGDKMEAAE"
     gene            1121..2314
                     /locus_tag="QF359_04885"
     CDS             1121..2314
                     /locus_tag="QF359_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJO86275.1"
                     /translation="MKPRTVLSMEQALSMPSATLRFVQLGWRVIRIEAVTSGRGNPGD
                     PNRYIGSKVADEDRYSYFIAPNVGKEAIALNLKEQAGQDALKRIITELDVDIFCCNTV
                     PSRYESLGIDYETLSAVKPDLIWAGISALGPAFPDVPGYDPVIQALAGYMELTGDAEG
                     DPTLSGIPLVDLKAGDEVYAGVCLALAEQAESGKGKRIDVSMFQAAASWLITTLPLVD
                     FGCDYSEITRSGNEHRKFIPTNAYKTKDGFIFMAQGSDVQWQRFIAIPKFASLESEQR
                     LTNNSRLEGREQLQRDISDIMANFETSELAADLRGATIPCAPISTIPQVIERKELDGK
                     LTTTTALDGQTIRMQPMAVDLSNGHSNLNFPPKYGEQTEAILSEAGFSAADLEGLKAD
                     NVIPA"
     gene            2345..3175
                     /locus_tag="QF359_04890"
     CDS             2345..3175
                     /locus_tag="QF359_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86276.1"
                     /translation="MSNKLENKVALVTGAGRGIGQAIATKLASESANLVINDLTEEPA
                     LETKKIVEDMGRECEIVVGDVTAEDFGDRFSKTAVDRFNAIDIIVNNAGYPWDGVIQK
                     YTDEQFQAMMEVHVTAPFRILRSASEFMRQAAKDEKAAGEVVHRKVVNISSFAGLYGN
                     AGQIGYASAKSALVGMTRTLAKEWGRYNINVNCVAFGYIQTRMTKDLGDAEAVAQVGD
                     RKITMGVHPDMTKALVQMIPLGRGGTPQEAADAVYLMCAPESNYISGQIVLAAGGLII
                     "
     gene            3197..>4048
                     /locus_tag="QF359_04895"
     CDS             3197..>4048
                     /locus_tag="QF359_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HJO86277.1"
                     /translation="MDQKVTTSPVTLDDRYSLASGKAYMSGTQALLRLLLEQAWRDKA
                     AGLNTAGFVSGYRGSPLGGFDLQLWKAQKYLQEDGIHFEPGLNEELAVTAVWGSQQTD
                     IFGSEKYDGVFGLWYGKTPGLDRSGDAFKHANMNGTSRYGGVLAVSGDDPGASSTTVP
                     SQSEHTFASFMMPVIYPSTIEEFLHMGLLGYGMSRYSGNWIGFKTLSDIAETSASINI
                     GTAVPEFKLPDNHGDIWEQVSIRWPDDRWDADSRLQEIRLPAAVTFARANQFDQVVIA
                     PPQRRFGI"
BASE COUNT          998 a          989 c         1085 g          976 t
ORIGIN      
        1 aaaacagtct acttaaaaac gcagccttgg cagactgcat taaaatcgga gctgaaaaaa
       61 ctgattttct caccaagcat gctgaaaata cggcggcgcg tgaaaaccca gcccgcattc
      121 ggaaaggtat cggcattgcg acctcgatcc acaatgcggg tggcgctaaa attcataaaa
      181 gtgatggctg cggcacgatc ctgacgatgg atgattatgg ccgggcgacc gtgattaccg
      241 gcgcgtctga aattggtcag ggcattgatg cggtgatcac tcagcttgtc agtgaagaac
      301 tcggtattcc aacttccgat gtcataattg ccaataatga ttcagccatc ggtccttggg
      361 atgtcggcgt gcacgccagc cggacaacct ttattgccgg taatgctgct cgtaatgcag
      421 cggtgaaagc gaaagcgcaa atccttgcct ccgccgcccg tcaatccaat gtcagcgccg
      481 ataagttgga cctgcgtggt ggccatgttg tgcaaaaaga taatggcgtt tccgtaacta
      541 aacttgaccg cttactgcgg gcgatgcatt tcgctggtga agatgctgag ttggtaatgg
      601 tttcggaata ttacgagccg ccaagcgagc tcgaagacaa atcccatgtt ggagatatat
      661 cggcggccta tgcgcatggt gcatacatca ccgaacttga agtcgacacc ctgaccggcg
      721 gcgtcaagct gcacaaaatg acctgtgttc aagatgtcgg caaagttatc aataaacttg
      781 gcatcgaagg tcagatggaa ggcggtatcg cgcaaggtat cggttacggt ttgtcggaag
      841 agttgattat tgaagaaggc attgttaaaa accccaattt ccgtgattac aaagtcgtca
      901 ctgcaccgga aatgccggaa atcgaatgtc attttatcga agatgatgaa gagaccggcc
      961 cgtacggtgc caaaggaatt tctgagttgc cagcgattat tccaggggcc tcaattgcca
     1021 atgcaatata taacgctatc ggcgtgcggt tcgacaatcc gccgatcacg ccggaaaaaa
     1081 ttgtccgtgc tctccacggc gacaaaatgg aggctgccga gtgaaacctc gcaccgtcct
     1141 ttccatggag caggcgttat ccatgccatc ggcgaccttg cgctttgtcc agcttggctg
     1201 gcgggtaatc cggatcgagg cggtaacatc cggccgtgga aatcctggtg atcccaatcg
     1261 ctatatcggc agtaaagttg ccgatgaaga ccggtattcc tattttattg cgcccaatgt
     1321 cggcaaggaa gcgattgcgc ttaatcttaa agagcaggct ggtcaggacg cactcaagcg
     1381 catcatcacc gaactcgatg ttgatatttt ttgctgcaac accgtgccga gccgctacga
     1441 aagtctcggc attgattatg aaacactatc tgccgttaaa ccggatttga tctgggcggg
     1501 gatttcagcg ctgggccctg cgtttccgga tgtgcccggc tatgatccgg tgatccaggc
     1561 tttggccggc tatatggagc tgaccggtga tgccgaaggt gatccgacct tgtcaggcat
     1621 tccgctggtc gatctcaaag ctggtgatga agtctatgcc ggtgtctgtc tcgccttggc
     1681 cgaacaggct gaatccggta aaggtaagcg gattgatgtg tcgatgtttc aagccgccgc
     1741 ctcctggctg atcacgactt tgccgttggt tgattttggc tgcgattatt ccgagatcac
     1801 gcgctctgga aatgaacatc gcaaattcat tccgaccaat gcctacaaaa ccaaggacgg
     1861 ctttattttc atggcgcaag gtagtgacgt gcaatggcag cgttttatcg ccattcccaa
     1921 atttgcttcg ctggaaagcg aacaacgcct taccaataac agccggttgg aaggccgcga
     1981 gcagttgcag cgcgatatca gcgacatcat ggccaatttt gaaacttccg aactggcggc
     2041 tgatttgcgc ggtgcaacaa ttccttgcgc tccaatctcg accattccgc aagtgattga
     2101 gcgcaaagaa cttgacggca aactgacgac gacaacagcg ctcgatggcc aaaccatccg
     2161 catgcagccg atggcggtcg atctttcaaa cggtcattca aatttgaatt tcccgccaaa
     2221 atatggcgaa caaactgaag cgatcctgtc tgaggccggt ttttcggcag cggatttgga
     2281 aggtttaaaa gcggacaacg ttattccggc ttgagccgat ttatcagata aaaggaaaat
     2341 acgcatgagt aataaattgg aaaacaaagt agcccttgtg accggtgctg gtcgcggcat
     2401 tggccaggcc attgctacta aattggcaag cgagagtgcc aatcttgtta ttaatgatct
     2461 gaccgaagag ccggcgcttg aaacaaaaaa aattgtcgaa gatatgggcc gtgagtgcga
     2521 gatcgttgtc ggtgatgtaa ccgcagaaga ttttggcgac cgtttctcca aaacggccgt
     2581 tgatcgattt aatgcgattg atatcatcgt caataatgcg ggctatccct gggacggcgt
     2641 catccagaaa tacaccgacg agcaattcca ggcgatgatg gaagtccatg taaccgcgcc
     2701 ctttagaata ttacgcagtg cttctgagtt catgcgccaa gccgccaaag atgagaaagc
     2761 agctggtgaa gttgttcacc gcaaagtcgt caatatttcc tcttttgccg gtctttacgg
     2821 taatgccggt cagatcggtt atgcttcggc aaaatctgcc ttggtcggta tgacccggac
     2881 cctcgccaag gaatggggtc gctataacat caatgttaat tgtgtcgcgt ttggctatat
     2941 ccagacccgc atgaccaaag atttgggtga tgccgaagcg gtggcgcaag ttggtgatcg
     3001 gaaaattacc atgggtgtgc atccggatat gaccaaagcg ctggtgcaaa tgattccgct
     3061 gggccggggt ggcacacctc aagaagccgc cgatgcagtc tatctgatgt gtgcgccaga
     3121 atctaattac atcagtggcc aaattgtctt agctgcgggt ggccttatta tctaacccag
     3181 agatcgccga cgtaaaatgg accagaaagt tacaaccagc ccggtaacct tggacgaccg
     3241 ttacagtctt gcttccggca aagcctatat gagcggaacg caggcgttgc tgcgcctgct
     3301 tctcgagcag gcttggcggg ataaagctgc cggattgaac acggcaggct ttgtttcagg
     3361 ctatcgcgga tcaccgctcg gtggttttga tctccagttg tggaaagcac aaaaatatct
     3421 ccaggaagac ggcattcatt ttgaaccggg tcttaatgaa gaattggccg tcactgcggt
     3481 ctggggctcg cagcaaacgg atatcttcgg ctccgaaaaa tatgacggcg tgttcggcct
     3541 gtggtacggc aaaactcccg gacttgatcg ctcgggtgat gctttcaaac atgccaatat
     3601 gaacggtacc tctcgatatg gcggggtgtt ggctgtcagt ggcgacgacc cgggagcctc
     3661 ctcgaccacg gtgcccagtc aaagtgagca tacgtttgcc tcttttatga tgccggtcat
     3721 ttatccctct accatcgaag aatttcttca tatgggattg ctcggttatg gtatgtcgcg
     3781 ctattccggt aactggattg gctttaaaac cttgtcagac atcgctgaaa cttcggcgtc
     3841 gatcaatatc ggtacagcag ttccggaatt caaactaccc gataatcacg gtgatatttg
     3901 ggagcaagtc agcatccgct ggcctgatga ccggtgggac gccgatagcc gtctccagga
     3961 aattcgtttg ccggcggcgg tgacttttgc cagggccaat caatttgacc aagttgtcat
     4021 tgcgccaccg caacgtcgtt ttggcata
//
LOCUS       DASCNL010000362         1339 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000780237, whole genome shotgun sequence.
ACCESSION   DASCNL010000362 DASCNL010000000
VERSION     DASCNL010000362.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1339)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1339)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000780237"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="QF359_04900"
     CDS             complement(<1..435)
                     /locus_tag="QF359_04900"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HJO86278.1"
                     /translation="MVKVLFICMGNICRSPTAEGVFRSIVKDAGLSDEIKIDSVGTGS
                     WHVGDPPDRRSQEAAARRSIDISHQRSRQISQDDIAEFDYLVVMDRSNIDNLDHLVPT
                     NMMQKIYLFLEFAPRLNHSDVPDPYYGGPTGFDVVLDLIEEAS"
     gene            464..1207
                     /locus_tag="QF359_04905"
     CDS             464..1207
                     /locus_tag="QF359_04905"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0017136 - NAD-dependent histone
                     deacetylase activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacylase"
                     /protein_id="HJO86279.1"
                     /translation="MEQRVQNIVILTGAGISKESGLDTFRDEDGIWSKVCIEDVATPE
                     AFRCDPEKVQGFYNARRRQLLGGNIKPNGAHDALARLEKEWPDKAGGKVTIVTQNIDN
                     LHEAAGSVNLIHMHGEILKARCSACGGVSPCEDDLGQGESCPDCGEINRLRPHVVWFG
                     EMPLEMARIYDLLEDCALFISIGTSGNVYPAAGFVQHARSHGLAHTIELNLEPSEGAT
                     IFAEARYGPASDLIPAYVVELLKYGIAKK"
BASE COUNT          337 a          349 c          333 g          320 t
ORIGIN      
        1 agaagcctct tctatcagat caagcacaac atcaaatccg gttggcccgc cataataggg
       61 gtccggaaca tcagagtggt taagcctagg ggcaaattcc aaaaaaaggt aaattttttg
      121 catcatatta gtgggaacca gatgatcgag attatcaata ttgctgcgat ccatgacgac
      181 cagataatca aattcggcaa tatcatcctg actaatttgc cttgaacgtt ggtgtgagat
      241 atcaatgctg cgccgcgccg ccgcttcttg tgaccgccgg tcaggcggat cgccaacatg
      301 ccacgacccg gtaccaaccg aatctatttt aatctcgtcg ctcaatccgg cgtctttgac
      361 aatcgaccgg aacacgcctt ccgctgtcgg cgagcggcaa atatttccca tacagataaa
      421 aagaaccttg accacgatcg tctcccactg tcccatactc tatatggaac agcgtgttca
      481 aaacattgtt attttaaccg gcgccggtat ttcgaaagaa tccggccttg atacctttcg
      541 cgacgaagac ggcatttggt cgaaagtctg catcgaagat gtcgccacac cagaagcttt
      601 tcgctgcgat ccggaaaaag tccaagggtt ttataatgcc cgccgccgcc agctgcttgg
      661 tgggaatatt aaacctaatg gcgctcatga tgcgctggca cggctcgaaa aagaatggcc
      721 ggataaggcc ggcggcaaag tcaccatcgt cacccaaaat attgataacc tccacgaagc
      781 agccggatcg gtgaatctaa tccatatgca cggtgaaatt ttgaaagcac gttgcagcgc
      841 ctgtggtggc gtgagcccgt gcgaggatga tcttggccag ggtgaaagct gtcccgattg
      901 cggtgagatt aaccggctgc gcccgcatgt ggtttggttc ggtgaaatgc cattggagat
      961 ggcccggatt tacgacctgc tcgaagattg cgccctgttt atctcgattg gcacctcggg
     1021 caatgtctat ccggcggctg gatttgtcca gcatgcacgt tcgcatggct tagcccatac
     1081 catcgagctc aatcttgagc cttccgaagg ggcgacaatt tttgccgaag cgcgctatgg
     1141 accggccagt gatctcattc cagcctatgt cgtcgagctc ttaaaatatg gtatcgcaaa
     1201 aaaataaatt gcatgatctt ctaaaggaag ttcgcgcctg tgaaatctgc gcgcctgatt
     1261 tgccgttggg accacgtcct acagtggtgg ctaagtcttc agctaagatt atgatcatcg
     1321 gccaagcccc cggcaccaa
//
LOCUS       DASCNL010000363         1605 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000781497, whole genome shotgun sequence.
ACCESSION   DASCNL010000363 DASCNL010000000
VERSION     DASCNL010000363.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000781497"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /gene="rplB"
                     /locus_tag="QF359_04910"
     CDS             <1..441
                     /gene="rplB"
                     /locus_tag="QF359_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HJO86280.1"
                     /translation="ALPMANIPVGTIIHNVELKVGGGAQVARSAGTYVQLIGKDQGYA
                     QLRMNSGEIRIVRAECMATIGAVSNSDKANIKLGKAGRKRWLGKRPAVRGVAMNPVDH
                     PHGGGEGRTSGGRHPVTPWGKPTKGKRTRSNKKTDRLIIRRRKR"
     gene            451..729
                     /gene="rpsS"
                     /locus_tag="QF359_04915"
     CDS             451..729
                     /gene="rpsS"
                     /locus_tag="QF359_04915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HJO86281.1"
                     /translation="MARSVWKGPFVDSYLLKKAEASRASGRNDVIKTWSRRSTVLPQF
                     VGLTFGIYNGRKFIPVVITENMVGHKMGEFSPTRTYLGHTADKKVKRE"
     gene            732..1112
                     /gene="rplV"
                     /locus_tag="QF359_04920"
     CDS             732..1112
                     /gene="rplV"
                     /locus_tag="QF359_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HJO86282.1"
                     /translation="MGKKAAARRFADNEAIAYGKMIRTSPQKINLLAESIRGKSCEAA
                     LNDLTFSTRRIAGEVKKVLQSAIANAENNQHLDIDRLYVAEASTGRAFVMKRWRPRAR
                     GRTGRIFKPFSNLTIVVREREETA"
     gene            1112..>1605
                     /gene="rpsC"
                     /locus_tag="QF359_04925"
     CDS             1112..>1605
                     /gene="rpsC"
                     /locus_tag="QF359_04925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HJO86283.1"
                     /translation="MGQKVNPIGFRLGINRTWDSRWYAEAGSYADQLHEDLAIREFLQ
                     DHLKQASLSKIIIERPAKRARITIHTARPGVVIGKKGADIEMLRKALSERTGDDVSLN
                     IVEIRKPEIDATLIAENIAQQLERRIAFRRAMKRAVQSAIRLGVEGIRINCAGRLGGA
                     EIART"
BASE COUNT          411 a          389 c          429 g          376 t
ORIGIN      
        1 gcgttgccga tggcgaatat tccggtcggc acgatcattc ataatgttga gcttaaagtt
       61 ggcggcggtg cccaagttgc ccgttctgcc ggtacttatg ttcaattgat tggtaaagac
      121 caaggctatg cccagctgcg tatgaactct ggtgaaatcc gcatcgttcg cgctgaatgc
      181 atggcgacaa ttggtgctgt ctccaattct gataaagcga atatcaaact tggtaaagct
      241 ggtcgtaagc gatggttggg caaacgcccg gccgtacgtg gcgtggcgat gaacccagtt
      301 gatcaccccc atggtggtgg tgaaggccgg acctcaggtg gccgtcatcc ggtgacacca
      361 tggggcaagc caaccaaggg taaacgtact cgtagcaaca agaaaactga tcggctgatt
      421 atccgccggc ggaaacgtta aggaggaacc gtggctcgtt ctgtatggaa aggaccgttc
      481 gtcgattcct atctgcttaa gaaagcagaa gcatcgcgtg catccggtcg aaatgatgtg
      541 attaaaacct ggtcccgtcg ctcgactgtt ctaccacaat tcgtgggttt gaccttcggt
      601 atttataacg gccgaaaatt tattccagtt gtgataaccg agaatatggt cggtcacaaa
      661 atgggagagt tctccccgac gcggacctat ctcggtcata cggccgataa aaaagtgaag
      721 agggaatagt catgggcaag aaagcagcag cccgtcgttt tgccgataat gaagccatag
      781 cgtatggcaa aatgattcgg acctcaccgc aaaagattaa tttgctagct gaaagcattc
      841 gcggtaaatc ctgcgaagca gcactaaacg atctgacatt ctcgactcgc cggattgccg
      901 gcgaggttaa aaaagtactg caatcggcta ttgccaatgc ggagaacaac cagcacctcg
      961 atatcgaccg actgtatgtt gccgaggcaa gcactggccg cgcatttgta atgaaacgtt
     1021 ggcgtccacg ggctcgcggc cgtaccggca gaatttttaa accgttcagc aacttgacca
     1081 tcgttgttcg tgaacgtgag gagactgcat aatgggtcaa aaagtaaacc cgatcggctt
     1141 tcgcttaggg atcaaccgta cctgggattc ccgttggtat gctgaagccg gcagttatgc
     1201 agatcagttg catgaagatt tggctattcg tgagttcctg caagatcact tgaaacaggc
     1261 cagtcttagc aagatcatta tcgaacgccc cgccaagcgt gcacgcatta ccattcatac
     1321 cgcacgtccc ggcgttgtaa tcggtaaaaa aggcgctgac attgaaatgc tgcgtaaagc
     1381 actttcagag cgtaccggcg acgacgttag tctgaacatt gttgaaatcc gtaagcctga
     1441 aatagatgca actttgatcg ctgaaaatat tgcccagcag ttggaacgcc ggattgcttt
     1501 ccgtcgcgcc atgaaacgcg ccgtgcaatc agctattcgc ctcggcgttg aaggtatccg
     1561 catcaattgt gccggtcgtt tgggcggtgc tgaaattgcc cgtac
//
LOCUS       DASCNL010000364         2913 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000781699, whole genome shotgun sequence.
ACCESSION   DASCNL010000364 DASCNL010000000
VERSION     DASCNL010000364.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2913)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2913)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000781699"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            195..1397
                     /locus_tag="QF359_04930"
     CDS             195..1397
                     /locus_tag="QF359_04930"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HJO86284.1"
                     /translation="MKRILTIVLQIFLIAAFTSAVQAQSAPKEVVIGASIPKNGVLAA
                     FGSYAGWGYKTAVAETNAKGGVMLKKYGKRVPIKLVVYDDESRPELATKNIERLVIKD
                     GAHALLGSATPPLVISGAIVAERERIPMVAALSPIRAFLGANKAGWKWTWNMFFDELE
                     MTQQQFLTLNSVKSNKKVALFTDNGQDGVVMGMLWGKNAPKLGYEVVYHAKFPVGTTE
                     YGDLIRRAKEAKAEIIIAQMITPDAIALWKQMGALNYKPKAAFFEKGGEPVVWSKILG
                     KSAQGTMVAGYWHPDLGYPGAKELRARFEKDTGELYSQHIADAYAAAQVLIDGMERAG
                     SIDPVAVNAAIGKTDKTYVVGPVKFTEGKGKRSAALPTFMLQWQNGDLEVVHPKKWAT
                     KKLIYPLP"
     gene            1481..2356
                     /locus_tag="QF359_04935"
     CDS             1481..2356
                     /locus_tag="QF359_04935"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86285.1"
                     /translation="MSFFTVSAGALNGLMLGGLYACMALGLSMVFGVMRFVNIAHGEL
                     LVLAAFLSFVFSTAFGLHPFIVMLVLIPILFVLGYVMQRVLINPLMSAGLEPSLLTAF
                     GLSIIAQNLFVEIWGGNTKSLNNNFSEMNVNLLGIDVPLLYIISFFIGIVVTVGIHLF
                     ITRTYTGRAIRAAAQDAATAMVMGINVNRIYAITAAIGAATAALGGTLIGMTFSFTPT
                     TGFPWLLKGFVVVVLGGMGNIIGTLAGGLLLGLSEGIGAAFVGTGYRDMVGFVIFLLV
                     LMFRPTGLFGLKGSE"
     gene            2364..>2913
                     /locus_tag="QF359_04940"
     CDS             2364..>2913
                     /locus_tag="QF359_04940"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86286.1"
                     /translation="MDKKYSPWAILILVTIVLAFLPSFGDRYALFIAYFLVLNVAFAQ
                     SWNLVGGYTGLIALGHAAFFGIGAYAAAISIITFELPVVAGFIIGGLASTAFAFLISF
                     PTFRFRGIYFAIGTLVLAEALRIWMINWEFIGGAQGMQFPIGIGFRLSGYFYIMLGLA
                     VGSTALLMYILRSKLGVGLRAIR"
BASE COUNT          650 a          686 c          755 g          822 t
ORIGIN      
        1 atacgcgaat taatcggtga cactgcagca aattggcata aagtctttat ttaatgtatt
       61 gcataaagat acagtcgtct cgtataatag gttgatttaa aatctaagtt tgctatgctc
      121 aatcaccaaa acgtgactac aataataata ttagccaaaa atacaaaaat atttttgata
      181 actcggagga aatcatgaaa cgaattctaa caattgtttt gcaaattttc ctgatcgctg
      241 cattcaccag tgcagtgcag gctcaaagcg cgcccaaaga agttgtcatc ggcgcatcta
      301 ttccaaaaaa tggcgtcctc gctgcctttg gttcctacgc tggatgggga tataaaacgg
      361 cggttgccga aaccaatgcc aagggcggcg tcatgcttaa gaaatatggc aagcgcgtac
      421 cgatcaaatt ggtggtttat gacgatgaaa gccgcccgga attggcgacc aaaaacatcg
      481 aacggctggt tattaaagac ggcgctcatg cactcctcgg ttctgcgaca ccgccattgg
      541 ttatcagtgg tgcgatagtt gccgagcgcg aacgtatccc gatggtcgct gccttgtcac
      601 cgatccgggc tttcctcggc gccaataagg cgggctggaa atggacttgg aacatgtttt
      661 ttgatgaact agaaatgacc cagcagcaat ttctgaccct gaattcagtg aaatcaaata
      721 agaaagttgc actgtttacc gataatggcc aggacggcgt tgtcatgggt atgctgtggg
      781 gtaaaaacgc accaaagctt ggctatgaag ttgtttatca cgccaaattc ccggtcggca
      841 caactgaata cggtgatctc atccgccgcg ccaaagaggc caaagcggaa attattattg
      901 cccagatgat aacaccggat gcgattgcgc tgtggaaaca gatgggagct ttgaactata
      961 aaccaaaagc tgctttcttt gaaaaaggtg gtgagccggt tgtttggtcg aaaattctcg
     1021 gtaaatctgc acaaggcacc atggttgccg gttattggca tccggacctc ggctatcccg
     1081 gcgccaaaga actccgtgcc cggtttgaga aggataccgg agaactttac agccagcata
     1141 tcgctgacgc ctatgccgca gcacaggtgc tgatcgatgg tatggaacgg gctggttcga
     1201 ttgacccggt tgctgttaac gccgctattg gcaagaccga taaaacctat gttgttggtc
     1261 cggtgaaatt caccgaaggt aaaggcaagc gctcagcggc cctgccgacc tttatgctgc
     1321 aatggcagaa cggcgatttg gaagttgtcc atccgaaaaa atgggcaacc aagaagctga
     1381 tctatccact gccatagtcg ctagctgaga aataaatcga gcctgaagat cggatttatt
     1441 aacagcggtc ttcgggctcg aacgttatgc ggtaggattc atgagttttt tcactgttag
     1501 cgcgggtgca ttgaacggtc tgatgctggg tgggctctat gcctgcatgg cgctggggct
     1561 ctccatggtc tttggcgtga tgcgctttgt caatatcgct catggcgaac tgctcgtgtt
     1621 ggcggctttc ttatctttcg ttttctcaac tgcctttggc ttgcatccat tcatcgtgat
     1681 gctggtgttg ataccgattt tgtttgtgct tggctatgtc atgcagcgcg tgctgatcaa
     1741 tccgttgatg agtgccgggc tggagccttc actgctcacc gcttttgggc tgtcgatcat
     1801 cgcgcaaaat ctgtttgtcg agatttgggg cggtaatacc aaatccctca acaacaattt
     1861 ttccgaaatg aatgttaatt tattggggat tgatgtacca ctgctttaca tcatctcgtt
     1921 ttttatcggc atcgtcgtca ctgtcggcat tcatctcttt atcacccgca cttataccgg
     1981 ccgtgctatt cgtgccgccg ctcaagatgc ggcgacggcc atggtgatgg gaataaacgt
     2041 caatcgtatt tacgctatca ccgcagcgat aggagcggcg acagccgctc tcggcggcac
     2101 cttaatcggt atgacatttt ctttcacgcc gaccaccggt tttccctggc tgttaaaagg
     2161 ttttgtcgtt gtcgttttgg gcggcatggg gaatatcatt ggtactttgg cgggcgggtt
     2221 actgctcggc ttatctgaag gcatcggcgc tgcctttgtc ggcaccggct accgggatat
     2281 ggttggcttt gtcatttttc tgttggtttt aatgttccgg ccgaccggcc tgttcggtct
     2341 caagggttcg gagtaacaag ccaatggata aaaaatattc tccctgggcc attttgatcc
     2401 tggtaaccat tgttctggca ttcttgccgt cattcggtga tcgctatgcc ttgttcatcg
     2461 cttacttttt agtgttaaac gtcgcctttg cccaaagctg gaatttggtt ggcggctata
     2521 ccgggttgat cgccctcggt cacgcagcct tttttggcat cggcgcctat gccgcagcaa
     2581 tcagcatcat cactttcgag ctgcccgtgg tcgccggctt tatcattggt gggctggcca
     2641 gtacagcgtt cgcctttttg atttcctttc cgaccttccg ctttagaggg atttattttg
     2701 ccatcggcac gctggtgcta gctgaggcgc tccgaatttg gatgatcaat tgggaattta
     2761 tcggtggtgc ccaaggcatg cagttcccca tcggcatcgg tttcaggctt tccggttatt
     2821 tttacattat gctcggcctg gcggtcggct cgacggcact gctgatgtat attttgcgca
     2881 gcaagcttgg tgttggttta cgagctattc gtg
//
LOCUS       DASCNL010000365         1046 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000782137, whole genome shotgun sequence.
ACCESSION   DASCNL010000365 DASCNL010000000
VERSION     DASCNL010000365.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1046)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1046)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1046
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000782137"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="QF359_04945"
     CDS             <1..220
                     /locus_tag="QF359_04945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86287.1"
                     /translation="IALGSVGILALTVSKVSGDKNPCMAALKQATTGKQPASHKAPAE
                     PKSSNPVKSITEGISASLKSLFDGKWKR"
     gene            226..942
                     /locus_tag="QF359_04950"
     CDS             226..942
                     /locus_tag="QF359_04950"
                     /inference="COORDINATES: protein motif:HMM:NF019180.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043461 - proton-transporting ATP synthase
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP12 family protein"
                     /protein_id="HJO86288.1"
                     /translation="MAEWSGAKRFYKEAGVIGVADGLLGVGLDGRPVKTPAGSNLAVS
                     SWSLADAMVAEWAAQGETIDPHSMPLCKLSATAIDRLSNNRNEVVGFTLMIAETDLLC
                     YRAEEPADLVARQQESWQPELDWAKQELSAEFTVTVGVLPINQPENALQALQTALTEL
                     DDFQLMGVSNAAAAAGSLILALGMQRGRINAAAMFEKSVLEGKYQMEIWGEDQETLER
                     HERVRADIEDSAKFLELLAS"
BASE COUNT          277 a          224 c          306 g          239 t
ORIGIN      
        1 gattgccttg ggttcggttg gaattttggc gttaacagtg agtaaggtga gtggtgacaa
       61 gaatccctgt atggcggcat taaaacaagc aactaccggc aagcagccgg cttctcataa
      121 agcgccagca gaaccgaaat caagcaatcc tgttaaaagc atcaccgaag ggatcagcgc
      181 ctcgctcaaa tccctctttg atggcaagtg gaagagataa tttaaatggc ggaatggtcg
      241 ggagcgaaac gcttctataa agaagcgggg gttattggag tagctgatgg tcttcttggc
      301 gtcgggctcg atggccgacc ggtaaaaaca cctgctggaa gtaatctggc agttagcagt
      361 tggtctttgg ctgatgcgat ggtagcagag tgggcggcac agggcgaaac catcgatcca
      421 cattcgatgc cgctgtgtaa attatctgcc accgcgattg accgtctgag caataaccgc
      481 aacgaggttg tcggctttac ccttatgatc gccgaaacag atttattgtg ttaccgagct
      541 gaggagccgg cggatttggt cgcgcgtcaa caagaatcct ggcagccgga acttgattgg
      601 gcaaaacagg aactatcggc cgagtttacc gtaacggtag gtgttttgcc cataaaccag
      661 cccgaaaacg cgttacaggc gttgcagact gcgctaactg aactcgatga tttccagttg
      721 atgggagtga gcaatgcggc agctgcagca ggttctctta ttctcgcctt aggtatgcag
      781 cgtggacgca ttaacgccgc agcgatgttt gaaaaatccg tccttgaagg aaaataccaa
      841 atggagattt ggggtgaaga ccaggaaact ttggagcggc atgagcgagt tcgagccgat
      901 attgaagatt cggctaaatt tcttgagttg ctggcaagtt gaggccggat caggtaatag
      961 ttaaaagcta aaagaataac gtgaggcgaa tctatgtttg agattatccg gcaattggaa
     1021 gaacgccgcg cccgggcacg ggccgg
//
LOCUS       DASCNL010000366         7611 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000784162, whole genome shotgun sequence.
ACCESSION   DASCNL010000366 DASCNL010000000
VERSION     DASCNL010000366.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 7611)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7611)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7611
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000784162"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            39..1379
                     /locus_tag="QF359_04955"
     CDS             39..1379
                     /locus_tag="QF359_04955"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO86289.1"
                     /translation="MERRKLDRNNNKTYREPTLNETSESEATFKSRAGRVAFQHADYR
                     AFWLARVLGVFAIDMQITAVSWQVYQLTGRPLDLGLVGLTQFAPFFCLFLVAGTVADH
                     FQRKRIMLTCVSLQILCAVAFFTMTVTGSASFLTILAILVFLGIARTFQSPAQQAIVP
                     LLVPKEHFANAVAWTSSGFQMARIAGPGFAGLMIVAGEQWVYGTVVFLFFCSAAMTFL
                     IKTNTQIISTAPVTIENILAGFKFIIKRQIIIGAIGLDLFAVLLGGATALLPIYATDI
                     LNVGSAGFGALRATHMVGAFAGALFLTQYPITGKAGKTLLIAVAIFGLGIIAFGVSTS
                     FWLSLTALFVLGAADSVSIFVRNNLVQIITPDDMRERVSAVSSVFVGASNEVGEFESG
                     VTAEWWGVVPAVVVGGIGTIFIAGLFAKIFPQLREVDSLDPNDLVRKYQKMEAI"
     gene            1376..1975
                     /locus_tag="QF359_04960"
     CDS             1376..1975
                     /locus_tag="QF359_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HJO86290.1"
                     /translation="MTEAKVQVLEQTTPYHGYLRIDHYKLKHKVFDQGWSNNLSREVL
                     ERGECVGLLPYDPERDEVVLLEQFRIGGYTAPNASPWQIEIVAGVIEPGHLPEETAHR
                     EAEEEAGISISELEPMMRYLSSPGCSSETLELFCGCVDAEGIGGVYGLAEEGEYIRVF
                     TVTAEEAFTMLDRGEIYNAMTIIAIQWLKLHHDMIREKW"
     gene            2119..3120
                     /locus_tag="QF359_04965"
     CDS             2119..3120
                     /locus_tag="QF359_04965"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HJO86291.1"
                     /translation="MDVREGFRDAIGNTPLIKLREASENTGCDIYAKCEFLNPGGSVK
                     DRAALYIIKDAEEKGLLKPGGVIVEGTAGNTGIGLALVGCASSYRTIIVIPETQTEEK
                     KDMLRLAGADLREVEAVPYKDSGNYIHVSERIAKEMADTHPHGAIWANQFDNTANRDA
                     HTFGTGPEIWEQLDGKVDGFTCSVGTGGTLAGVGMALKEHNKDVMIKLSDPMGSALYE
                     FYENGELKAEGDSITEGIGQGRETDNLKGAPIDGAYQITDEEALPIVFDLLKYEGLCV
                     GSSSGINIAGAMRMAEEMGPGHTIVTLLCDYGTRYQSKLFNPAFLKEKGLPYPDWLA"
     gene            3139..3996
                     /gene="sseA"
                     /locus_tag="QF359_04970"
     CDS             3139..3996
                     /gene="sseA"
                     /locus_tag="QF359_04970"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HJO86292.1"
                     /translation="MEYVHPEALVSTDWLADNLGASDIEIIDASFHLPAAQRNAQAEF
                     AANHIPGAVFFDIDDIADTDSDLPHMLPSPEKFSSRVRKLGIGSETHVICYDSNGGPG
                     AAMRAWWTFRIFGHDRVSVLSGGLPKWQDEDRPTSTDETPIIEKHFFSKFDPSLVLSF
                     DQIMANVDSHEYQMVDARAEGRYNGTDEEPRAGMRKGHIPGAINLPFQKLMDTENFMV
                     MRPADDLQTIISDACIDLEKPLVSSCGSGVTAAPLVLALYLLGHTRAAIYDGSWTEWG
                     SRDDTPIEV"
     gene            4006..5187
                     /gene="metC"
                     /locus_tag="QF359_04975"
     CDS             4006..5187
                     /gene="metC"
                     /locus_tag="QF359_04975"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HJO86293.1"
                     /translation="MSNSKRPDTRIVHTGSNPKAQKGAVNPPVYRASTVLFPTVQAMK
                     NAEKDKFDTTYYGVHGTPTTFALEEAMTDLEGGYRAVSTSSGLAAISTALISFLKAGD
                     HLLMTDSAYGPTRNFCNTMLKRFGVETTYYDPMIGAGIVELIKPETKVIFTESPGSYT
                     FEIQDIPAITEVARQNNIKVMMDNTWAAGYYFKPFEHGVDISIQATTKYQAGHADLVL
                     GHIIANNEKDWRKLKVNTSTLGQAVSPDVCYLGLRGLRTLSVRLEQHQETALTLAKWL
                     SERPEVDTILHPAFPSCPGHEIWQRDFTGASGLFSVILKDFSETQVSAMLDGMDYFAM
                     GYSWGGFESLIVASDPAKIRSATKWQAAGPLLRLHVGQEDVEDLIADLERGFDRLNGR
                     A"
     gene            5190..6356
                     /gene="metC"
                     /locus_tag="QF359_04980"
     CDS             5190..6356
                     /gene="metC"
                     /locus_tag="QF359_04980"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HJO86294.1"
                     /translation="MRKDAKRDTKLAHSGSHPEDQSGIVNPPVYHASTVDYGTVANMQ
                     ELRTDPNNNFVYGRWGTPTSKAFEEAVAELEGADRTVAVGSGLAAITTAMLAYVGTGD
                     HVLVCDSAYTPTRNLSENFFKRFGVETTYYDPLIGASIAEQFQDKTKVIYVESPGSHT
                     FEIQDIPAIAEAAHKAGIKVVMDNTWAAGFFFKPFDHGVDVSVQAATKYYVGHSDAMV
                     GTVSMCGDNVQPVIDCLRVLGNNIAPDDAYLALRGMRTLSVRLKRHEKNALKVADWLA
                     SQSEIDRVLHPALPSCPGHDLWQRDFSGSNGLFGVVFKPASEASMHSFIDGLELFSLG
                     GSWGGYESLVLPTNVTRTATKWIENAQSIRFHIGLEDPDDLIEDIAAGLKRLAD"
     gene            complement(6357..7157)
                     /locus_tag="QF359_04985"
     CDS             complement(6357..7157)
                     /locus_tag="QF359_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HJO86295.1"
                     /translation="MDEFILLALLAGVGVAIVAGPLGSFILWRRMSFFGDTLAHASLL
                     GVALGLLLGATNLTVGVVIVCVGAAAFLVVLQNRTRLGNDALLGILSHGTLAVGLVAI
                     SFMDNVRLDLIGFLFGDILSVTMIDLAWIYATVGVTIVVLAKIWRPLLSITIHEDLAR
                     AEGIQVTRLNLLFMILIALVVAAAMKVVGILLIAALLIVPASAARHYAKTPEQMTGIA
                     MLIGVFSVVGGLALSLSFDTPAGPSIVVIALVLFLISALMPGFSRLHQ"
     gene            complement(7150..>7611)
                     /locus_tag="QF359_04990"
     CDS             complement(7150..>7611)
                     /locus_tag="QF359_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86296.1"
                     /translation="ITGNYQSGIVGSIPTFVKITYIFQRGILQVLLARALLRDPDLLV
                     LDEPAQAVDVNGQAELYQLISTIRAERGCGVLMVSHDLHLVMSATDKVLCLNNHLCCV
                     GHPDAVSKDPNYVELFGPQVASSLALYHHHHDHEHAVDGHVVPSSEGHSHG"
BASE COUNT         1937 a         1958 c         1952 g         1764 t
ORIGIN      
        1 cccgcgattt tcattaatgc tttctgctag acaatctggt ggaaaggcgc aaactcgacc
       61 gcaacaacaa taagacctat cgagaaccca ccttgaacga aacatcagaa tcagaagcta
      121 ctttcaaatc cagagccgga cgagtggcgt ttcaacatgc tgattaccgc gccttctggc
      181 tggccagggt gctgggtgtt tttgccattg atatgcaaat caccgccgtc agttggcagg
      241 tctatcaatt aaccggtagg ccgttagact tagggttggt tggccttacc caatttgccc
      301 ccttcttttg cttgtttcta gttgccggta cggtcgctga tcacttccaa cgcaaacgga
      361 tcatgttgac ctgtgttagc ctccagattc tttgcgccgt tgcctttttc accatgacag
      421 taaccggaag tgccagtttt ctgacaattc ttgcgatcct cgttttttta ggcatcgcgc
      481 gcaccttcca atcccctgct cagcaggcca ttgtaccgtt gcttgtaccc aaggagcatt
      541 tcgctaatgc ggtcgcctgg acatcgagcg gctttcaaat ggcgaggatt gccggaccgg
      601 gtttcgccgg gctgatgatc gttgccggtg aacaatgggt ctatggtacg gtagtattcc
      661 tcttcttttg ttcagccgcg atgacatttc tgatcaaaac caacacccag atcatcagca
      721 cggcaccagt gacaatcgag aacatcctcg ccgggtttaa attcatcatt aagcgccaga
      781 tcatcattgg cgcaattggc ttggatttat ttgcagtatt attgggcggc gcgacggcac
      841 ttttgcccat atatgcaacg gatatcctca acgttggctc ggctggtttt ggtgccttgc
      901 gggccacgca tatggttggc gcgtttgccg gtgccttatt cctcacccaa tacccaatca
      961 ccggcaaggc aggcaaaaca ttattaatag ccgtcgcgat atttggctta gggattatcg
     1021 cttttggtgt ctcgacgagt ttttggctgt ctctaacagc gctctttgtg ctgggcgctg
     1081 ctgattcggt cagtatattt gtacgcaaca acttggtgca gattatcaca ccggatgata
     1141 tgcgtgagcg ggttagcgcc gtcagctctg ttttcgtcgg cgcatccaat gaagtcggag
     1201 aatttgagag cggagtcacc gcagaatggt ggggagttgt cccggctgtt gttgttggcg
     1261 gcatcgggac tatttttatt gctggattat ttgctaagat attcccgcaa ttaagagaag
     1321 tggacagttt agacccgaac gatctggttc ggaagtacca aaaaatggag gcgatatgac
     1381 cgaggctaag gttcaagtac ttgaacaaac gaccccgtat cacggttatt tgcggattga
     1441 tcattacaag ctcaaacaca aagtttttga ccaaggttgg agcaacaatc tttcgcgcga
     1501 agttttggaa cgtggcgaat gtgtcggcct tctgccttat gatccggagc gcgatgaggt
     1561 agtgctgctc gaacaatttc gtattggtgg ctataccgca cctaacgctt caccgtggca
     1621 aattgaaatt gttgccggtg taatcgaacc tggtcacctg ccggaggaaa ccgcacaccg
     1681 ggaggccgaa gaagaagcgg gcatcagcat cagcgaatta gagccaatga tgcgctactt
     1741 atcgagccct ggttgctctt ccgaaacgct tgagcttttt tgcggctgtg ttgatgcgga
     1801 aggcattggc ggcgtctatg gactggcgga agaaggtgaa tatatccgcg tttttaccgt
     1861 cacggcagaa gaggccttta ccatgctgga tcgtggtgaa atttacaatg cgatgactat
     1921 aatcgccatc caatggctga aacttcatca tgatatgatc cgcgagaaat ggtagctaaa
     1981 ttgaacaaac aacgaaacgt gatcactttg acaagaaaat gccctctagc acgccgcgaa
     2041 tacttgatca ccctgcccac ccccgctagt ctctgcgaca tagagggaac ccaattaaaa
     2101 atacaaaagt gagagatcat ggacgtccgt gaaggattta gagatgctat cggcaatacg
     2161 ccgttaatca aattaagaga agcttccgaa aacaccggat gcgatattta cgcaaaatgc
     2221 gaatttctca atcccggcgg ctcggttaag gatcgtgccg cgctttacat cattaaagat
     2281 gccgaggaaa aaggcctgct gaaaccgggc ggcgttattg ttgaaggtac cgccggcaat
     2341 actggcattg gcttagcctt ggtcggttgt gccagcagct accggacgat catcgtgatc
     2401 ccggagaccc agaccgaaga gaagaaagac atgttgcgac ttgccggagc tgatttgcgc
     2461 gaagtcgaag cagtgcctta taaagactcc ggaaattata ttcatgtctc tgaacgcatc
     2521 gctaaagaaa tggccgacac ccatccgcac ggcgccatct gggccaatca gtttgacaat
     2581 accgccaacc gcgacgccca tacctttggc accggaccgg agatatggga acagctcgac
     2641 ggtaaagttg acggttttac ctgttcggtc ggtaccggtg gtaccctggc cggcgttggt
     2701 atggcgctca aagaacacaa caaagacgtt atgataaaac tttctgaccc gatgggctca
     2761 gcgctgtatg aattctacga aaatggtgag ttaaaagccg aaggcgattc aatcaccgaa
     2821 ggcatcggcc aaggccgcga aaccgataat ctcaaaggtg cgccgattga tggcgcctat
     2881 cagatcaccg atgaagaagc cttaccgatc gtctttgatc tgttgaagta tgaagggctt
     2941 tgcgttggct cctccagcgg cattaacatt gccggggcga tgcgaatggc tgaagaaatg
     3001 ggaccggggc ataccatcgt gacgctactg tgcgactacg gtacccgcta tcaaagtaaa
     3061 ttgttcaacc cagcgttcct gaaggaaaag ggtctgcctt atcctgactg gctcgcgtaa
     3121 atctggttaa atagagttat ggaatatgtt catcctgagg ccttagtaag taccgactgg
     3181 ctagctgaca atttaggcgc gtctgatatc gaaatcattg acgctagctt tcatctgccg
     3241 gcagcacagc ggaacgccca ggcggaattc gccgccaatc acatcccagg cgctgtgttt
     3301 tttgatattg acgacattgc cgatacggat agtgacttac cacatatgct gccgagcccg
     3361 gaaaaatttt caagccgagt gcggaaactt ggcattggca gcgaaaccca cgttatttgc
     3421 tatgatagca acggcggacc cggggcggcg atgcgtgcct ggtggacatt tcgtatattc
     3481 ggccacgacc gggtatccgt gctcagtggt ggcctgccga aatggcagga tgaggataga
     3541 ccaaccagca ccgatgaaac gccgatcata gaaaaacact ttttctccaa attcgatcca
     3601 tcactggttc tcagcttcga tcaaataatg gccaatgtcg acagccatga atatcaaatg
     3661 gtcgatgccc gcgccgaagg ccgctacaat ggtaccgatg aagaaccacg ggcaggtatg
     3721 cggaaaggtc atattccggg tgccattaat ttgccctttc agaaactgat ggatactgaa
     3781 aattttatgg ttatgcgccc ggctgatgat ctgcaaacaa tcattagcga cgcgtgtatt
     3841 gatctcgaaa aaccgttagt ttcaagctgc ggatccggcg taactgccgc accgcttgtt
     3901 ttagcgctgt atctgctcgg ccatacccgc gccgcaattt atgacggctc ttggactgaa
     3961 tggggcagcc gcgacgatac gccaatagaa gtataacctt tggcaatgag caactcaaaa
     4021 agacccgata cccgtatcgt ccacacagga tctaatccaa aagctcagaa aggtgccgtc
     4081 aatccaccag tctatcgcgc ctcaacagtg ctgttcccga ccgtgcaggc gatgaaaaac
     4141 gccgaaaagg acaaatttga tacgacctat tacggcgttc acggcacacc gacgactttt
     4201 gccctagaag aagccatgac ggacctcgaa ggcggctacc gggcagtttc aacatcctca
     4261 gggctcgccg ccatttcgac agcgttgatc agttttctca aggcaggtga tcacttactg
     4321 atgaccgata gcgcctatgg accgacgcgg aatttttgca atacgatgct gaagcgattc
     4381 ggtgttgaga caacttatta tgatccgatg attggcgcag gaattgttga gctgatcaaa
     4441 cccgagacca aggtaatctt taccgagtca cccggctcct acacttttga aattcaggac
     4501 atcccggcaa tcaccgaagt tgcccgtcaa aacaatatca aggttatgat ggataacact
     4561 tgggctgctg gttattactt caaaccgttt gaacatggcg ttgatatttc catccaagcg
     4621 acgaccaaat atcaagccgg tcatgccgat ttagtcctcg gtcacatcat tgccaataac
     4681 gagaaggatt ggcgcaaact taaagtgaac accagcacac tcggccaggc ggttagcccg
     4741 gatgtgtgtt atttaggctt gcggggcttg cgcaccctaa gcgttaggct cgaacaacat
     4801 caggaaaccg ccctcacctt ggccaagtgg ctgtcggaac gcccggaagt tgataccatc
     4861 ctgcaccccg ctttcccttc ttgtcccgga cacgagatat ggcagcgcga ctttaccggc
     4921 gcgagtggat tgttcagtgt aattttgaaa gatttttccg aaacccaagt cagcgccatg
     4981 cttgatggca tggattattt cgctatgggc tattcctggg gcggttttga aagcttgatc
     5041 gtggcatctg atccagcaaa aattcgctcg gcaacgaaat ggcaagctgc cggtcccctg
     5101 ctccgtcttc acgtcgggca agaagatgtt gaagacctca tcgccgatct ggaacgcggt
     5161 tttgaccgtt tgaacgggag ggcgtaagaa tgcggaaaga cgccaagaga gataccaagc
     5221 tcgcccatag cggttcacac cctgaagatc aatccggcat cgttaatcca ccggtctacc
     5281 atgcttcgac cgttgattac ggcaccgtcg cgaacatgca ggaactgcgc accgatccca
     5341 acaataattt tgtctatggc cggtggggca caccgacctc aaaagctttt gaagaagcag
     5401 tcgccgagct tgaaggtgcc gaccggaccg tcgctgtcgg ctctggttta gcggcaatca
     5461 ctacagcgat gctggcttat gtcggaaccg gtgatcatgt cctggtgtgc gacagcgcct
     5521 atacaccgac gcgcaatttg agtgaaaact tttttaaacg ctttggtgtt gagacgacct
     5581 attacgatcc gttgatcggc gccagcattg ctgaacagtt tcaagataaa actaaggtaa
     5641 tttatgtgga atcacctggc tcgcatacgt ttgaaattca ggacattccg gcgattgctg
     5701 aggcggctca taaagccggc attaaagtcg tcatggataa cacctgggct gccggttttt
     5761 tctttaaacc cttcgaccac ggtgtcgatg tctcggtgca ggccgcgact aaatattatg
     5821 tcggccattc cgatgccatg gtcggcacgg tttcgatgtg cggtgacaat gtgcagccgg
     5881 tgattgattg cctgcgcgtg cttggtaaca acatcgcacc ggatgatgcc tatctggctt
     5941 tgcgcggtat gcggacgtta tcagttaggc taaaacgcca cgaaaaaaat gcgcttaaag
     6001 tagccgactg gctggccagc cagtcggaga ttgaccgggt gctgcatccg gccctgccct
     6061 cctgtccggg ccacgatctg tggcagcgcg atttctccgg ctccaacggc ttatttgggg
     6121 tagtgtttaa accagccagt gaagcgtcga tgcatagctt tattgatggt ttagaactgt
     6181 tcagcctcgg cggctcctgg ggtggctacg aaagcctcgt gctaccgacc aatgtcaccc
     6241 ggacggcaac caagtggatc gagaacgcgc aaagcatccg cttccatatc ggcctcgaag
     6301 acccggatga cctgatcgag gatatcgcgg cgggactgaa gcgtttggct gactaactat
     6361 tgatgcaggc gggagaagcc cggcatgagc gcactgatca agaataatac caaagcaatg
     6421 acaacaatcg aaggaccggc tggcgtgtca aagctaagcg acagcgccaa accaccaacc
     6481 accgagaaca ctccaatgag catagctata cccgtcattt gctccggtgt tttagcatag
     6541 tgacgcgctg ctgaggccgg cacgatcaaa agtgcagcaa tgagcagaat accaacgact
     6601 ttcatcgccg ctgcgacgac caaggcaatc aagatcataa acagcaagtt cagccgagtg
     6661 acttgaatcc cctcagccct cgctaaatct tcatgaatgg ttattgacag caacggccgc
     6721 caaatcttgg ccaacacaac gattgttacc ccaacagtcg cataaatcca ggcgaggtct
     6781 atcatcgtca cggataaaat atcaccaaat agaaagccga taagatcaag ccggacatta
     6841 tccataaatg agatagcgac cagcccaact gccagcgtac cgtgagataa tatccccagc
     6901 agcgcatcat taccgaggcg ggtgcgattt tgcagaacca ccaaaaaagc tgccgcacca
     6961 acgcagacaa tcactacacc cacggtcaag ttagtggcgc caagcagcag ccccaatgcc
     7021 acgcccagta aagatgcatg cgccagcgta tctccaaaaa aagacatgcg ccgccacaag
     7081 ataaacgagc cgagcggtcc ggcaacaatc gccaccccta ctccggccaa tagtgccaat
     7141 aaaataaact catccatgag agtggccttc gctgctaggc acaacatggc cgtcaacggc
     7201 atgttcatga tcatgatgat ggtggtaaag ggcgagactg ctggcaactt gcggaccgaa
     7261 cagctcgaca tagttcgggt ctttgctcac tgcatccgga tggccgacac agcagagatg
     7321 attattgagg catagcactt tgtcggttgc cgacatcacc aaatgcagat cgtgggagac
     7381 catcaaaaca ccgcagccgc gctctgcccg aatggtggag atcaattgat agagctcggc
     7441 ctgaccattg acgtcaaccg cctgagctgg ttcatccagc accaacagat cgggatcgcg
     7501 gagtaacgcg cgggccaaca acacctgcag aatgccacgc tgaaagatgt acgtgatttt
     7561 tacgaacgtt ggtatggatc caacaatgcc actctggtaa ttgccggtga t
//
LOCUS       DASCNL010000367         1710 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000790283, whole genome shotgun sequence.
ACCESSION   DASCNL010000367 DASCNL010000000
VERSION     DASCNL010000367.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000790283"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            125..1606
                     /gene="nuoN"
                     /locus_tag="QF359_04995"
     CDS             125..1606
                     /gene="nuoN"
                     /locus_tag="QF359_04995"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HJO86297.1"
                     /translation="MPLATLPSLTPALPEIFLAIAAMLLLMLGVFSSEENNTRMVSYA
                     SVLVLIVAVPFVGLVTEGRSVTFGGAFVTDTFAVYIKALVLVSAATVIIMSKDYLKTQ
                     GIERFEFPVLIVLATLGMMMMISANDLIALYLGLELQSLSLYVIASFQRDSARSAEAG
                     LKYFVLGALASGLLLYGMSMIYGFAGTTSFDTLARIFHDSHNHISVGVVVGIVFMLAG
                     LAFKVSAVPFHMWTPDVYEGAPTPVTALFAVAPKIAAMGLFIRVMIGPFGELGAQWQQ
                     IIIFISIASMLLGAFAAINQTNIKRLMAYSSIGHMGYALIGLAVAGAAGDAALRADGV
                     ESMLIYLGIYMVMNIGTFACILLMKRDGRMVEGIDDLVGLSKSNPALAMILSIFMFSM
                     AGIPPLAGFLGKLYVFQAAIQVELYALAIIGVLASVVGAYYYIRIIKVMYFDDPVDEL
                     DRGISLEMKTILVVTGVVIIFFVFYPAPLLTGAESATAALFHE"
BASE COUNT          352 a          407 c          449 g          502 t
ORIGIN      
        1 ttatccgagc ctgttcctgg atgcgatgca tgcctcggtc gagaatttag ttgaacgcta
       61 tcacagcgcg cttgccgcag cgcagcatat ttcggtagtt gcgaagtaag aggaatttga
      121 agctatgcca cttgcaacgt taccatctct aacccccgcg ttgccggaga tattcctggc
      181 gattgctgca atgttgctgc tgatgctggg agttttctcg agcgaagaaa acaatactcg
      241 aatggtgtct tacgccagcg tattggtctt gatcgtagca gttccttttg tcggtctggt
      301 gaccgaaggc cggtcggtaa cctttggcgg cgcatttgta accgatacat tcgctgtcta
      361 catcaaagct ctggtgctgg tatccgccgc gacagtgata attatgtcga aagattatct
      421 taaaacacaa ggtattgagc gttttgaatt tccagtgctg atagtgttgg cgaccctcgg
      481 catgatgatg atgatctcgg ccaatgacct gatcgcgctt taccttggct tggagctgca
      541 aagcctgtcg ctttatgtga ttgcgtcttt ccagcgcgac tcagcacgct cggccgaagc
      601 cggccttaaa tattttgtcc tcggtgcact ggcatccggc ctgctgctgt atggcatgtc
      661 gatgatctat ggcttcgcgg gaacaacaag ctttgatacg ctggcccgga ttttccacga
      721 ttcgcacaac cacatatcgg tcggtgtggt agtaggtatt gtctttatgc tggctggttt
      781 ggccttcaaa gtatctgccg tgccgttcca tatgtggacg ccggatgttt atgaaggcgc
      841 tccgacaccg gtaacagctc tttttgccgt ggcgccaaag attgccgcca tggggctatt
      901 catccgagtt atgattggac cgtttggaga gcttggggct cagtggcagc agatcattat
      961 atttatctcg atcgcctcga tgctattggg cgcttttgcg gcgatcaatc agaccaacat
     1021 taaacgcctg atggcctata gctcgattgg tcatatgggc tacgccttaa ttggtttggc
     1081 ggtggcaggt gctgctggtg atgccgcgtt gcgagctgat ggtgttgaga gtatgctgat
     1141 ttatctcggt atttatatgg ttatgaatat cggcaccttt gcctgtattt tattgatgaa
     1201 gcgcgatggc cgcatggttg aaggtatcga cgaccttgta ggcttgtcga aatccaatcc
     1261 agcgctggcg atgattttgt caattttcat gttctcgatg gcgggtattc ctcctctcgc
     1321 cggcttcctc ggtaaactgt atgtcttcca ggccgcgatc caagtcgaac tctatgctct
     1381 ggccatcatc ggtgtactag ccagtgttgt tggcgcctat tattatatcc gtatcatcaa
     1441 ggtgatgtat tttgatgatc ctgtcgacga gcttgatcgc ggtatcagtc tggaaatgaa
     1501 aacgattctg gttgtcaccg gcgtcgtcat tatcttcttt gttttctatc cggcaccact
     1561 attgaccggc gcagaatcgg cgacggcagc tctcttccat gagtaatcat gtctaaactt
     1621 ccacagatgc ctcaaggcta caacttggtg gcggtcgata caattggcag cactaatgat
     1681 gaactcaaac accgtgccat cacggataat
//
LOCUS       DASCNL010000368         1303 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000790363, whole genome shotgun sequence.
ACCESSION   DASCNL010000368 DASCNL010000000
VERSION     DASCNL010000368.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000790363"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            233..433
                     /locus_tag="QF359_05000"
     CDS             233..433
                     /locus_tag="QF359_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86298.1"
                     /translation="MQEDRWGNFVNLISPDEEFYNEMINWLLENGDDQWSVGSNDNEA
                     EDSEVTCRVRFDSPKKLAAFNN"
     gene            498..>1303
                     /locus_tag="QF359_05005"
     CDS             498..>1303
                     /locus_tag="QF359_05005"
                     /inference="COORDINATES: protein motif:HMM:NF025042.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4147 domain-containing protein"
                     /protein_id="HJO86299.1"
                     /translation="MSVFDAAVAAAQPSLCIPSYLPDLPKGKTGVIGGGKASAAMAAA
                     VEKHYPGEVSGLVITRYDYGVPCEQIEIIEAAHPVPDLAGRAGAEKMLQMVQEFTAND
                     LVLCLISGGGSALMALPAEGVTLEEKQVVNQTLLRSGATISEMNIVRKHLSQIKGGRL
                     ARACVPAKLHTLIISDVVGDDLSVIASGPTVPDPSTYADTLKIVRKYDMDLPASALAV
                     LQKGTDETPKPGDEIFTNNKVEIIASGRNSLEAAAKGAQEAGITPIILND"
BASE COUNT          364 a          275 c          347 g          317 t
ORIGIN      
        1 tatgtgtaat tccgtaacag tctggtatga tggaaaatca aaaaaacaaa ttcaacgcat
       61 cgccaatcac tatgctgatt tcattatcga tggtatatta aggtaggttg atacggttac
      121 atctaggcga cgaacggagt tttttggcgt gactgataac gaagataaat cagaattgta
      181 caatcaatcg gaccggaggg aagaagaaat ctcgacagat aatgattagt gattgcaaga
      241 ggatcggtgg ggtaattttg ttaatctcat tagcccggac gaagaattct acaatgaaat
      301 gatcaactgg ttgctggaaa atggtgacga tcagtggtcc gttggatcaa atgacaatga
      361 agccgaagac agtgaagtaa cttgcagagt tcgatttgat agtccgaaga aactcgccgc
      421 cttcaataat taactggacg ataaatcaaa caccccttaa ttcttctagt atgtccgttg
      481 aacctcaaaa tttccttttg agtgtatttg atgctgccgt tgcggctgca caaccttctc
      541 tttgtatccc tagttatctg ccggatttac ccaagggaaa aaccggggta attggcggcg
      601 gtaaagcgag tgcggcgatg gcggcagcgg ttgaaaaaca ttatccgggt gaagtcagcg
      661 gcttggtgat tacgcgctac gattacggcg taccgtgcga gcaaattgag atcattgaag
      721 ccgctcaccc ggtgccggat ctggcaggca gggcaggggc agaaaaaatg cttcaaatgg
      781 tgcaagagtt cactgccaat gatctggtgt tgtgtttgat ctcgggcggc ggctcggcgc
      841 tgatggcatt accggcggaa ggtgtcacgc tcgaagagaa acaggtcgtt aatcaaacgt
      901 tgctgcgatc cggcgcgacg atcagtgaaa tgaatatcgt gcggaaacat ctttctcaaa
      961 ttaaaggtgg gcgattggcc cgcgcttgtg ttccggccaa gcttcacaca ttgataattt
     1021 ccgacgtcgt gggtgatgat ctttcggtga ttgcgtcggg cccgaccgtg ccggacccgt
     1081 caacttatgc cgatacgcta aaaattgtgc gaaaatacga catggacctg ccggcttcgg
     1141 cgctggcggt tttgcaaaaa ggtaccgatg aaacacccaa accgggcgat gaaattttta
     1201 caaataataa agtggaaata atcgccagtg gccgaaactc cttagaggca gccgccaagg
     1261 gtgctcaaga ggccggcatc acaccgatta ttctaaacga cag
//
LOCUS       DASCNL010000369         1398 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000792852, whole genome shotgun sequence.
ACCESSION   DASCNL010000369 DASCNL010000000
VERSION     DASCNL010000369.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000792852"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..610)
                     /locus_tag="QF359_05010"
     CDS             complement(<1..610)
                     /locus_tag="QF359_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HJO86300.1"
                     /translation="MTLNLPVRPDRDCNECPRLRAFLLDNRDKYPTWHNAPVDSFGDI
                     NGEILIVGLAPGLKGANRTGRPFTGDYAGDLLYDTLLKFSLAEGEYKADPEDGLRLNN
                     CRITNAVRCLPPENKPVGAEVKNCAPFLINEIQTMPNLKIVLALGGLAHGAILTVLEK
                     RKALFKFGHNIFHELDEVVLANSYHCSRYNTNTGRLTEKMFHD"
     gene            complement(635..1259)
                     /locus_tag="QF359_05015"
                     /pseudo
     CDS             complement(635..1259)
                     /locus_tag="QF359_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089486.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
BASE COUNT          390 a          307 c          310 g          391 t
ORIGIN      
        1 catcgtgaaa cattttttcc gtcagacgcc cggtattggt attatagcgt gagcagtgat
       61 aactattggc cagcaccacc tcgtccaatt catgaaatat gttgtggccg aatttgaaga
      121 gcgctttacg cttttccagc accgttaaaa ttgcaccatg tgccaggccg ccgagtgcca
      181 gcacaatctt caaatttggc atggtctgta tttcgttgat caagaaaggc gcgcagtttt
      241 ttacttctgc gccgaccggc ttgttttctg gtggcaggca acgtacagca ttggtaatcc
      301 ggcaattgtt gagcctcagc ccatcctccg ggtcggcttt gtattcacct tccgccaaac
      361 taaattttaa caaggtgtcg tataatagat cacccgcata gtcgccggta aatgggcgcc
      421 cggtccggtt agctccctta aggcccggtg ccagaccgac aatcaaaatc tcgccattaa
      481 tgtcgccaaa tgaatcaacc ggtgcattat gccaggttgg atacttatct ctgttatcga
      541 gtaaaaaggc gcggagacgg ggacattcgt tacaatcgcg atcgggacga accggcaggt
      601 ttaaagtcat ttttaattat atactgaaag tgatttacgc gttgccgaaa tattcatcgt
      661 catctgaaat aggcattaaa ccgtcatcat cattgagatc atgatgaggt gagagataat
      721 ctgattggcc acctttgtgg gcaatctcat gttgtaaatc ctgcaattca atgaagtagt
      781 cggactggcg gcgcagttca tcggcgacca tcggtggttt ggacttcact gtgctgataa
      841 ctgtagcccg tttgccttta cgcagcgtaa cttcaaccag tcggcggaaa tcaccatcgc
      901 cggagaataa tacaatatga tctaagtgtt cgagcatctc catgacgtcg atggcgagtt
      961 caatatccat gttaccttta attttacgac gcccggtagg atcggtgaac tctttgatcg
     1021 gtttggtcac cattgtgtag ccattgtagt caagccaatc ggccagcggg cggatcggcg
     1081 agaattcttg atcttcgatt aaggctgtat aatagaaagc gcgaactaaa accgcttgct
     1141 cttcaaaaac tttgagcatg cgatttgtaa tcaacatcaa aacctagagc acgggcggta
     1201 gcatataaat ttgagccatc aataaataat gctattcttt cattagaatg aaaattcata
     1261 ggaaaattcc ttggtcctaa aatgaatttt tcagcgtaaa aaattactaa taacaagagt
     1321 ataacaatat aaccattaat atctcattgg cagtaatgta atactaggaa tttaaccatg
     1381 agaattgtga aataatct
//
LOCUS       DASCNL010000370         1823 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000794512, whole genome shotgun sequence.
ACCESSION   DASCNL010000370 DASCNL010000000
VERSION     DASCNL010000370.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000794512"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1823
                     /gene="thrS"
                     /locus_tag="QF359_05020"
     CDS             <1..>1823
                     /gene="thrS"
                     /locus_tag="QF359_05020"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HJO86301.1"
                     /translation="LSLPDDSVREYDTPVTGANVAADIGPGLAKAALAVRIDGEMEDL
                     SRLIEADCNFSIVTAKDDGALDLLRHDAAHVMAQAVQELFPGTQVTIGPSIENGYYYD
                     FARDEPFSTDDFEAIENKMAEIVDQDLEFFREVWDRDEAIEFFKAKGEAYKAELIEAI
                     PAGDDVSIYRQGDWVDLCRGPHLPSTGKLGKHFKLMKLAGAYWRGNSDNEMLQRIYGT
                     AWADKKQLKAYLNMLEEAEKRDHRRLGREMELFHIQEEAIGSAFWHPKGWQLYRTVQN
                     YIRNRLEKAGYVEVNTPQLVNRSLWEDSGHWEKFRGDMFISEAEDKILAIKPMNCPCH
                     VQIFRHGTKSYRDLPLRMAEFGSCHRNEPSGALHGLMRVRAFTQDDAHIFCTEDQITE
                     ETKIFCDLLMSVYKDFGFEDVVVKFSDRPEVRMGDDATWDKAEKALTDAVNAAGYDYE
                     LNPGEGAFYGPKLEFVLRDAIGRDWQCGTHQVDFVLPERLDANYVGEDGEKHHPVMLH
                     RAILGSFERFIGILIENYAGRFPFWLAPLQVMVATITDEAKPYAEKVLEALKDAGLHA
                     EADLRNEKINYKVREHSVQKVPVILVVGAREAEENTVAMRRL"
BASE COUNT          448 a          451 c          491 g          433 t
ORIGIN      
        1 ctgtccctac ctgatgacag cgtcagagaa tatgacacgc ccgtaaccgg cgccaacgtt
       61 gctgcagata tcgggcccgg cctcgccaag gctgccctag ccgtgcgcat tgatggggag
      121 atggaggatc tgtcccgcct cattgaagcg gattgtaatt tttccattgt taccgccaaa
      181 gacgatggtg cgttggattt actgcgccac gatgctgccc atgtgatggc gcaggccgtg
      241 caggaacttt ttccaggcac ccaagttacc atcggtccct cgatcgaaaa cggctattat
      301 tatgatttcg cccgtgatga acctttttcg accgatgact ttgaagccat tgaaaataaa
      361 atggcggaga tcgttgacca agatctcgaa tttttccgtg aagtttggga tcgcgatgag
      421 gccatcgaat tttttaaagc taaaggcgaa gcctataaag ccgaactaat cgaagcaatt
      481 ccggcgggtg atgacgtttc gatctatcgt caaggcgatt gggttgatct ctgccgggga
      541 cctcatctac cctcgacggg caagctcggc aagcatttta aattgatgaa actcgccggc
      601 gcctattggc ggggtaattc cgataacgaa atgctgcagc gtatttacgg taccgcctgg
      661 gcggacaaga agcaacttaa agcctatctc aacatgctgg aagaagccga aaagcgcgac
      721 caccgccgtc ttggccggga gatggaattg ttccatatcc aggaagaagc catcggctcg
      781 gcgttctggc atcccaaagg ctggcaactt tatcgcacgg tgcaaaacta tatccgtaac
      841 cggctcgaaa aagccggtta tgtcgaagtc aacacgccgc aattggtcaa tcgctcgtta
      901 tgggaggatt ccggccattg ggaaaaattc aggggcgata tgttcatctc ggaagccgag
      961 gataaaatcc tcgccatcaa gccgatgaac tgcccctgtc atgtgcagat atttcgccac
     1021 ggcaccaaaa gctaccgcga cctgccattg cgcatggctg agtttggctc gtgccaccgc
     1081 aatgagccat caggcgcttt gcatggcttg atgcgggtgc gggctttcac ccaggatgac
     1141 gcccatatct tctgcactga ggatcagatc accgaagaga ctaagatttt ttgtgatctg
     1201 ctgatgagcg tttataaaga tttcggcttt gaagatgtcg tcgttaaatt ctcggatcgc
     1261 ccggaagtgc gtatgggtga tgatgcgact tgggacaaag ctgaaaaagc cctcaccgat
     1321 gccgtcaatg cagcaggcta cgattacgag cttaaccccg gtgaaggcgc gttctacggg
     1381 cctaaactgg agtttgttct gcgcgatgcg atcggccgtg actggcaatg tggcacccat
     1441 caggttgatt ttgttctgcc ggaacgattg gacgctaatt atgtcggtga agatggtgaa
     1501 aaacaccatc cagttatgct acaccgggcc atcctcggat cattcgaacg ttttatcgga
     1561 attctgattg agaactatgc cggacgcttt cctttctggc tggcgccgct gcaagtgatg
     1621 gtggcgacga ttaccgatga agccaagccc tatgccgaaa aagtgcttga agctttaaaa
     1681 gatgctggat tgcacgctga agccgatctc aggaatgaaa aaattaatta caaggtacgt
     1741 gagcattctg tccaaaaagt cccggtaatc cttgtagttg gggcccgtga ggcggaagaa
     1801 aacaccgtag ccatgcgtcg tct
//
LOCUS       DASCNL010000371         1085 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000798223, whole genome shotgun sequence.
ACCESSION   DASCNL010000371 DASCNL010000000
VERSION     DASCNL010000371.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000798223"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="QF359_05025"
     CDS             complement(<1..216)
                     /locus_tag="QF359_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HJO86302.1"
                     /translation="MFDVTRLRKKTFINFGNNWRTDFTIFLNARTVKLFDRAGVNPLL
                     LKGKLVRVRGWNKSFNGPMINATHPEKI"
     gene            complement(357..530)
                     /locus_tag="QF359_05030"
     CDS             complement(357..530)
                     /locus_tag="QF359_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86303.1"
                     /translation="MLSLGKNVTLSYGGRRMDYNGRLLAHLHLPDGAWLEGAFLAQCM
                     ARFYFSLIAGRSS"
     gene            complement(524..757)
                     /locus_tag="QF359_05035"
     CDS             complement(524..757)
                     /locus_tag="QF359_05035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86304.1"
                     /translation="MCAVLQTKELKLVKDETAEVSVVIDGYTVKLKRAIGKGNLVSYR
                     IRLVGIQAPKLPLGRKNFKTQPLAVKPKPPWKC"
     gene            862..>1085
                     /locus_tag="QF359_05040"
     CDS             862..>1085
                     /locus_tag="QF359_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HJO86305.1"
                     /translation="MDVSSTTYQLYPDIEAYEKGMLDLDGHHKMYWEVSGNPDGIPVV
                     FLHGGPGAGAAPSHRRFFDPEHYRIVIFDQR"
BASE COUNT          276 a          274 c          258 g          277 t
ORIGIN      
        1 aattttctcg ggatgagtgg cattgatcat aggaccatta aacgacttgt tccagccacg
       61 taccctgacg agcttgcctt ttaatagtag aggattaacg cccgcccgat caaataactt
      121 taccgttcgt gcattgagga aaatggtaaa atcagtccgc caattgttac caaaattaat
      181 gaatgttttc ttccgcaggc gcgtgacatc aaacacgcgt ccttcgatcg attggaagga
      241 gtttttaaaa cgcctttaaa tcctcgacca attcggattg ctggtgaatg taataaaacg
      301 ggtgccgcca gatgccgagt tttttgcctg ggcagctttt tctccttcca gcatttctac
      361 gatgaccgcc cggctatcag ggaaaaataa aaccgcgcca tgcattgtgc taggaaagca
      421 ccttccagcc acgcaccatc cggtaaatgc agatgagcaa gcaaacgacc gttatagtcc
      481 atccgccgcc cgccataaga caacgtgaca tttttaccga ggctcagcat ttccaaggcg
      541 gctttggctt aaccgccagg ggctgggttt taaaattctt ccgtccgagc ggcaatttcg
      601 gtgcctggat accaaccaac cggattcggt atgataccaa attgcctttg ccgatggccc
      661 gtttgagctt caccgtataa ccatcgataa caacagagac ttcagcggtt tcatctttaa
      721 cgagtttaag ttccttggtc tgaaggacgg cgcacaaagc agcgctaagg cgatcacagc
      781 gacaataggc acaaaattgt gaccggcttg agatcaagct agtttttgac agagtatgct
      841 caaccgccta gacctatatt catggatgta tcctcaacaa catatcagct ttatcctgat
      901 attgaagctt atgaaaaagg tatgctcgat ctcgatggtc accacaaaat gtattgggag
      961 gtctcgggta acccggacgg tatcccggtg gtctttctgc atggcgggcc gggcgcgggc
     1021 gcggcgccgt cgcaccggcg gttttttgat cccgagcatt accgcatcgt gatttttgat
     1081 cagcg
//
LOCUS       DASCNL010000372         3706 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000803108, whole genome shotgun sequence.
ACCESSION   DASCNL010000372 DASCNL010000000
VERSION     DASCNL010000372.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3706)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3706)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3706
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000803108"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="QF359_05045"
     CDS             <1..182
                     /locus_tag="QF359_05045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86306.1"
                     /translation="LTPRIVGTNLVPTGGGRFAAIGAVANVDPFPLTELNQINALIYK
                     GESEFQYERFDAPQQ"
     gene            231..458
                     /locus_tag="QF359_05050"
     CDS             231..458
                     /locus_tag="QF359_05050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86307.1"
                     /translation="MPERRINNSMMGNSRERFAAAFDLTNHTDAHLNSEPRRSVLTTT
                     SLDKIIATYELTREVIYDEVPPRSENISMVL"
     gene            complement(505..2127)
                     /locus_tag="QF359_05055"
     CDS             complement(505..2127)
                     /locus_tag="QF359_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding/glycosyltransferase family
                     2 protein"
                     /protein_id="HJO86308.1"
                     /translation="MKFGPVPVAEAEGAILAHSARLTGRILKKGHILTASDLGLFTDD
                     GITEITVARLEKDDVGENDAAAAITKALAGQHVTTGKAFTGRCNLIADVQGLITFDRD
                     RLDNINLADESVTIATMPTMDIASPAQLIATIKIIPFAIPKSVLDAVLKIAGEEPLVE
                     IAPFELKKIGLILTRLPGMKESILDKTLQTAVARVQEFGSEITMEIRCEHTEKDVVDA
                     ITETNSKSCDIILIFGASAVVDRADVLPAAVVAAGGSVDHFGMPVDPGNLLFIGGIDD
                     TPLVGMPGCARSPKLNGFDWVLWRLLANIPISSRDIMLMGSGGLLKEISERGQLRQDS
                     SEPKAQAREPKIAGLLLAAGSSRRMGKENKLLTDVDGTAMVTRVAKQITASQAEGLMV
                     VTGHEKDQVELALKNYATGFVHNPDFADGLSTSLKTGLRALPDNIDGAIVCLGDMPLV
                     KAEHIDQLIRAFDPVEGRSICVPVHGRKRGNPVVWSKRFITEILSVTGDIGARHLLEE
                     HADQVIEVAIEQDGVLFDIDTPDRLVEVKKWT"
     gene            complement(2127..3131)
                     /locus_tag="QF359_05060"
     CDS             complement(2127..3131)
                     /locus_tag="QF359_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019086079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HJO86309.1"
                     /translation="MADANDILEQAVNWLSVGKKVALATVIGTWGSSPRPVGSQLAVD
                     DAGEFVGSVSGGCIEGAVIGEALASIEDGENRILDFGVTDEQAWEVGLACGGDIKVLV
                     ERADDKADLDLLANQRPIATVTDLVTGKRSTVTPTEDSGELSLSAELLDGARQALRDD
                     RSKTLEDGDNKLFVQVFNPPLRCAIIGAVHISQALVPISQIAGFEVTVIDPRGSFATE
                     ARFPDVTISDEWPDDAMKEFKPDTRTAVVTLTHDPKLDDPALEIALKSDAFYIGCLGS
                     HRTHASRLERLTEAGFNDADFARLHAPVGLDLGATSPAEIAVSILAEMVAAKHGKLES
                     "
     gene            complement(3158..>3706)
                     /locus_tag="QF359_05065"
     CDS             complement(3158..>3706)
                     /locus_tag="QF359_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO86310.1"
                     /translation="SDLINSKIPALAALAGTIGDQMVRNRGTIGGNLANNDPAASYPC
                     AVLALNATIKTDKREIATNDFFTGMFDTALDEGELILSVSFPVPEEAGYKHFPNPASR
                     FPIVGSFVAKGSDGVRVAITGAGPCAFRQTEFEAALSDEFNPDAIKDIKVSDDGLNSD
                     IHASADYRAHLINVMTRRAIGG"
BASE COUNT          927 a          961 c          909 g          909 t
ORIGIN      
        1 ctttaacgcc aagaatagtg ggcacaaatt tggtgccgac tggtggtggc aggtttgctg
       61 caatcggtgc tgtggcaaat gtcgacccat ttccgctgac tgaattaaat cagattaatg
      121 cgctgattta taaaggtgaa tctgagttcc aatacgagcg atttgatgcg ccgcagcagt
      181 aatttgcccg tcggcgtgcc tatgatcatt tcgggcaccc aatggagcag atgccggagc
      241 gccgcatcaa taattccatg atgggaaact ccagagagag gtttgctgcc gcttttgatt
      301 taaccaatca taccgatgcc catttaaaca gtgagcccag gcgttcggtt ctgactacta
      361 cgtctctgga caaaataata gcaacctatg agctgaccag agaagttatt tatgatgaag
      421 taccgccccg cagtgaaaat ataagcatgg tattataata tttgagtttt aatttgcagg
      481 tgactcagcc gcacaccagg ttttttatgt ccattttttt acttccacca atcgatcggg
      541 tgtatcgata tcaaacagca cgccatcttg ctcaatggcg acctcaatga cttgatcggc
      601 atgttcttcg agcaaatgcc gggcgccaat gtcaccggtg accgatagta tttcagtgat
      661 aaatcgttta ctccagacga ccggattgcc acgtttgcgg ccatgaaccg gtacgcagat
      721 agagcgccct tcaactggat caaaggcgcg gatcaattgg tctatgtgtt cggcctttac
      781 caagggcata tcgccgaggc agacgattgc accatcaata ttgtcgggca gggctctaag
      841 tccggtttta agcgacgtgc ttaagccgtc tgcgaagtca ggattgtgta caaaaccggt
      901 ggcgtaattc ttaagagcca gttcgacttg atccttttca tggccggtaa caaccattag
      961 tccttcagct tgggaagcag tgatttgttt ggcaacccgg gtcaccatgg ccgtgccatc
     1021 aacatcggtg aggagtttgt tctctttgcc catgcgccgt gatgaaccag cggccaggag
     1081 taggccagca atcttaggct cccgcgcttg ggcttttggc tcgctgctgt cttggcgtaa
     1141 ttgaccgcgt tcgctgattt cctttaacaa tccaccagag cccatcaaca tgatgtcacg
     1201 cgaacttatc ggtatattgg ccagcagccg ccacaacacc caatcaaaac cgtttagctt
     1261 gggagaacgg gcacatcccg gcatgccgac taaaggtgtg tcatcaatgc cgccgataaa
     1321 cagtaaatta cctggatcaa ctggcatacc gaaatggtca acactgccac ctgccgcaac
     1381 gacggcagcc ggcaaaacat ccgcccggtc aacaaccgct gaggcgccaa atatcaaaat
     1441 aatgtcgcag gatttagaat ttgtctcagt gatcgcgtca acgacgtctt tttcggtatg
     1501 ttcacaacgt atttccattg ttatttcgct gccgaattcc tgcacccgag ccacggcagt
     1561 ttgcagtgtt ttatcgagga tgctttcctt catgccaggc agccgggtca agattagtcc
     1621 aatttttttg agctcgaacg gagcaatctc aaccaatggt tcttcacctg caattttcaa
     1681 caccgcatca agtacagatt tagggattgc aaaaggaatg attttgatgg tcgcaatgag
     1741 ttgcgctggc gaggcgatat ccatcgttgg cattgtcgca atcgttacgg attcatcagc
     1801 cagattaata ttatccaggc gatcacggtc aaaggtgata agcccctgaa catcggcaat
     1861 cagattgcag cgcccagtaa aagctttgcc ggtagtaaca tgctgaccgg cgagcgcttt
     1921 ggttatggcc gccgccgcat cattttcgcc gacgtcatct ttttcgaggc gcgcaacagt
     1981 tatttcggtg ataccatcat cggtaaataa acccaaatca ctggcggtaa ggatatggcc
     2041 ttttttaaga atacgcccgg ttagtcgcgc tgaatgagcg aggatggcgc cttccgcttc
     2101 tgcgacagga accgggccga atttcattag ctctcaagct ttccgtgctt ggcggcaacc
     2161 atttctgcta aaatcgagac ggcaatttca gccggtgatg tggcgccaag gtcaagcccg
     2221 acaggggcat gtaagcgggc aaaatccgca tcgttaaaac cagcctctgt aagccgctcc
     2281 aaccgagagg catgagtgcg gtgactgccc aagcaaccga tgtaaaaagc gtctgattta
     2341 agcgcgatct caagtgccgg atcatccaat ttagggtcat gggtcagcgt gacaacagcc
     2401 gtgcgggtat ctggtttaaa ctccttcatt gcgtcatccg gccattcatc acttatggtg
     2461 acatccggga agcgcgcctc ggttgcaaac gaaccgcggg gatcaattac agtaacttca
     2521 aaaccggcaa tttgggatat cggcacaagc gcttgagata tatgaaccgc cccaatgatg
     2581 gcgcagcgca agggtggatt aaagacctgg acaaacaatt tgttatcgcc atcttccaat
     2641 gttttagagc ggtcatcgcg caatgcttgg cgagctccat ccagcaattc ggcacttaag
     2701 gacaactcgc cactatcttc ggttggtgtg acggtactgc gtttgccggt taccagatct
     2761 gtcacagttg cgattggacg ttgattggcc aggaggtcta agtcagcttt atcatcggcg
     2821 cgctcaacca gaactttgat atcgccgccg cacgccaagc cgacttccca tgcttgctca
     2881 tcagtaacac cgaaatcgag aattcgattt tcaccatctt caatagaagc gagggcttcg
     2941 ccaattactg ctccctcgat acagccaccc gagacagagc cgacaaattc accagcatca
     3001 tcgacagcaa gctgactgcc aaccgggcgg ggcgaagagc cccacgtgcc aatcacggtg
     3061 gcgagcgcga ccttcttgcc caccgacaac caatttacag cttgttctaa tatatcattg
     3121 gcatcggcca ttgcgcacct caaagtttaa gaagttatta tccgccaatc gcccggcgcg
     3181 tcattacatt aatcagatgc gcacgataat cagccgaggc atgaatatcg ctgttcaggc
     3241 catcgtctga gactttaatg tctttgatcg catctggatt aaactcatcc gatagcgctg
     3301 cttcgaattc tgtttgccga aacgcgcacg gaccggcacc agtaattgct acgcgaacac
     3361 cgtcagaacc tttggcaaca aaggagccga caatcggaaa acgcgacgct gggttcggaa
     3421 aatgtttgta gccggcttct tccgggactg gaaatgaaac cgacaagatc aattcccctt
     3481 catccaaagc cgtatcaaac atgccggtga aaaaatcgtt ggtagcaatt tcgcgtttgt
     3541 ctgtcttgat cgtcgcattc agcgccagta cggcgcaagg atagctcgcc gcgggatcat
     3601 tattggccaa gttcccgcca atggtgccac ggttacgtac catttgatca ccgatcgtgc
     3661 cggcgagggc tgcaagggct ggaattttgc tatttatcaa atcaga
//
LOCUS       DASCNL010000373         1150 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000804283, whole genome shotgun sequence.
ACCESSION   DASCNL010000373 DASCNL010000000
VERSION     DASCNL010000373.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000804283"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(209..>1150)
                     /locus_tag="QF359_05070"
     CDS             complement(209..>1150)
                     /locus_tag="QF359_05070"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF003166.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HJO86311.1"
                     /translation="GLFWPVPITVSARQALADQIEIGEDVALLDGETQQIMGVLTVED
                     KYSPDPALQCEKVFGTTDESHPGVAKVMAQPPVNLGGSVKVIEEGWFPQEFSDLYIRP
                     NESRKMFEDMGWSKVAAFQTRNPMHRSHEYMAKIAIDVTDGVFIHQVLGKLKPGDIPA
                     SVRVEAINAMIENYFADNIAIQAGYPIEMRYAGPREALFHALIRQNFGCSHLLVGRDH
                     AGVGDFYGPFDAHDIFDTLWDGALVTQPLKIGITFFCEKCDGMATDKTCPHDEEFRIN
                     ISGTRQREMLTNGEDISAKFSRPEVVAVLRKYYENLN"
BASE COUNT          293 a          289 c          268 g          300 t
ORIGIN      
        1 gggatattac tatcggggtg atcatccgaa gctggatgat gacgattggc attgtttcac
       61 tctctcccgc tatgaccggg aatccgggga atgggaaatg gaaaaggccc cagtgtatca
      121 cattatcgat taaacggagt ctaccaaaga aacttttgat gcaatgatca tagtctggaa
      181 ccgtgcacga ttatggcttg actaatagtc agttcagatt ttcataatac tttctcaaaa
      241 ccgccacgac ttccggacgg ctgaatttgg cggaaatatc ctcaccgttt gtcaacatct
      301 cccgttggcg tgtgccagaa atatttattc tgaattcttc atcgtgagga caagttttgt
      361 cggtcgccat gccatcacat ttctcacaaa agaaggtgat gccgattttc agcggctgtg
      421 tcaccagagc gccatcccac aaggtgtcga aaatatcgtg tgcatcaaag ggtccataga
      481 aatcaccgac gccggcatgg tcgcgtccga ccagaagatg ggaacatcca aaattttgcc
      541 ggatcagagc gtgaaagaga gcctctctag gtcccgcata acgcatctcg atcgggtaac
      601 cggcctggat ggctatatta tcggcaaaat aattttcgat cattgcattg attgcttcga
      661 cccgcacaga tgcaggtata tcgccgggtt tcaatttgcc caagacctga tggatgaata
      721 cgccatcggt aacatcaatg gcaatttttg ccatatactc gtggctgcga tgcataggat
      781 tacgagtttg gaacgccgcg acctttgacc agcccatgtc ctcaaacatt ttccggcttt
      841 cgttgggccg gatatacaaa tcgctaaatt cttgagggaa ccaaccctct tcaataactt
      901 ttaccgagcc cccgagattg accggcggtt gtgccatcac cttggcaact cccgggtggc
      961 tttcatcggt cgtgccaaaa accttctcac attgcaaagc aggatccggt gaatatttgt
     1021 cttcgactgt caatacaccc atgatctgtt gggtttcccc gtccagcaga gcgacgtctt
     1081 cgccaatttc aatttgatcg gctaaagctt gcctggccga aaccgttatt gggactggcc
     1141 aaaataagcc
//
LOCUS       DASCNL010000374         2676 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000805238, whole genome shotgun sequence.
ACCESSION   DASCNL010000374 DASCNL010000000
VERSION     DASCNL010000374.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000805238"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="QF359_05075"
     CDS             <1..213
                     /locus_tag="QF359_05075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter"
                     /protein_id="HJO86312.1"
                     /translation="LKILFENDPLLQNQYGIIKVNPALHKHVKSQEAEIFIKWVLSAE
                     GQATINTYRLNGKQVFFANAPGKKMN"
     gene            304..516
                     /locus_tag="QF359_05080"
     CDS             304..516
                     /locus_tag="QF359_05080"
                     /inference="COORDINATES: protein motif:HMM:NF036525.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86313.1"
                     /translation="MRSTIAELQAAGVGKNDLNSTIAAFAVNGMRSSTPYWFSHDGPE
                     MISEVGNHFALIFCHGALEEPPADKD"
     gene            543..1427
                     /locus_tag="QF359_05085"
     CDS             543..1427
                     /locus_tag="QF359_05085"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO86314.1"
                     /translation="MVVFYRRMPRFEYLKPQRFEDVLELLQNSTPNRYRVFAGGTDLM
                     DQLKQRKINVPETVIDLKGITELDFINFDKSSGLRIGALTTVADVAKSPEIEEHYPAL
                     AQGAREIASIQIQNRATITGNICNAVSSADSAPPLLALGAEVVCANRNGERTIKIEDF
                     FSGPGQTVLNPNELVKEITLPPPIDNSDSVYLKLAPRGRMDLAWIGVAVWAQISERIF
                     NNVRIGLGAAAPTPIRTPNAEEALCGLDVVSENIEAAAAIASGEASPRENSFRAGSEY
                     RHMMVEVLVKRVLTQLAG"
     gene            1440..1922
                     /locus_tag="QF359_05090"
     CDS             1440..1922
                     /locus_tag="QF359_05090"
                     /inference="COORDINATES: protein motif:HMM:NF013923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO86315.1"
                     /translation="MEKITCNFVVNGQAEEISIPPNRTLLHMLREDLMFHGVREGCSH
                     GECGSCNVILDGKLVNACLILAVEADGMEILTVEGMVDGDNLHPIQQAFVDESGMQCG
                     ACTTGMILSTKNLLDANPDPSREEIKDALAGNFCRCTGYAKIFESVEAAAESMKGTQS
                     "
     gene            1919..>2676
                     /locus_tag="QF359_05095"
     CDS             1919..>2676
                     /locus_tag="QF359_05095"
                     /inference="COORDINATES: protein motif:HMM:NF013482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO86316.1"
                     /translation="MSDQPAKIGDNWPNLIGKRLPRVDAVEKVNGDAKYAGDFNLTGQ
                     LWMKILRSPYPHAKIISIDASKALEMPGVKAVVTAEDFNGWSWGWGPTTRDETPLADE
                     KVRYFAEAVAAVAAEDEETAEEACTLINVVYEELPGIFDAEEAMQDGAPQVHDYVDNN
                     ISWDFHMDYGDVEEGFAEADFVREDRFETGRTLTGFLEPPAAVAQVDSSGITIYAAKQ
                     SPYFIYRQLASCFKLPLSKVRVIQPYVGGGFGGT"
BASE COUNT          691 a          645 c          709 g          631 t
ORIGIN      
        1 ctcaaaattt tatttgaaaa cgatcctttg ctgcaaaatc aatacggcat catcaaagtg
       61 aacccagccc tccataaaca cgtcaaaagc caggaggctg agatttttat caaatgggtt
      121 ctttcagccg aagggcaggc taccatcaat acctatcggt taaatggtaa acaggtattt
      181 ttcgccaatg cgcccggcaa aaaaatgaat tagggggctg acccagctaa ctagttcaaa
      241 tatagtttaa ctcactattt tatttgtctt aaatgagcca gctggcgccg cggtttcgag
      301 attatgcgtt caacgattgc agaactgcag gcagcgggcg ttggtaagaa tgacttgaac
      361 tcgacgattg ccgctttcgc ggtcaatggt atgcgcagct cgacgcccta ttggtttagc
      421 catgatggcc cggaaatgat tagtgaagtc ggcaatcatt ttgccctgat attttgtcat
      481 ggggcgctgg aagaaccacc ggcagataaa gattaaaagt tagacattgg gaggcgttaa
      541 ttatggttgt tttttatcgg cgaatgccgc ggtttgagta tttgaaaccg cagcgtttcg
      601 aggacgtgct ggagcttttg cagaatagta cgcccaatcg ttaccgggtt tttgccggcg
      661 gcaccgacct gatggatcaa ctcaagcaaa gaaaaatcaa tgtgccggaa acggtgattg
      721 acttaaaagg catcaccgag ctcgatttta tcaacttcga caaatcatcc gggttgcgta
      781 ttggtgcgtt gacaactgtt gccgatgtcg ccaaatcccc ggaaattgaa gagcactacc
      841 cagccctcgc ccagggggcg cgcgagatcg cctccattca aattcaaaac cgggcaacga
      901 ttaccggtaa catctgcaac gctgtttcat ccgccgattc agcaccgcct ttgttggcac
      961 taggagccga agttgtctgt gccaacagaa atggtgagcg gaccatcaaa atcgaagact
     1021 ttttctccgg acccggtcaa accgttttaa atccgaacga actggtgaag gaaatcacat
     1081 taccaccacc gatagacaac agtgatagtg tatatctcaa attggcgccc cggggccgca
     1141 tggatctggc ctggattggc gtggccgtct gggcacaaat ctctgaaaga atattcaata
     1201 atgtccgtat tggcttgggc gctgcagcgc cgacaccaat ccgcacacct aatgccgaag
     1261 aagctttatg cggtttggat gtggtctcag aaaacattga ggccgctgcg gcgattgcgt
     1321 ctggcgaagc gtcaccacgc gaaaacagtt tccgggccgg cagtgaatac cgccacatga
     1381 tggtcgaagt actggtcaaa cgcgtcctca ctcagttggc aggataagga agacaaccca
     1441 tggaaaaaat aacctgtaat ttcgttgtta atggacaggc cgaagaaatc tcaatcccac
     1501 caaaccggac cctcctgcat atgttgcgcg aggatttaat gtttcacggc gtccgcgaag
     1561 gctgcagcca tggtgaatgc ggctcctgta atgtgatctt agatggcaag ctggttaatg
     1621 cctgtctgat cctggcagtc gaggctgatg gcatggaaat cctcaccgta gaaggtatgg
     1681 ttgacggtga caacctgcat ccaattcaac aggcttttgt tgatgaaagc gggatgcaat
     1741 gtggcgcgtg cacaacgggc atgatcctct ctactaagaa tttattggat gccaatcccg
     1801 atccaagccg cgaagagatt aaggatgcgc tggctggtaa tttttgccgc tgtacggggt
     1861 atgctaaaat attcgaatcc gttgaagccg ccgctgagag catgaagggg acccagtcat
     1921 gagtgatcaa cctgcaaaaa ttggtgataa ttggccgaac ttgatcggca aacgtttacc
     1981 ccgggtcgat gcggtcgaaa aggtcaatgg cgatgccaaa tatgccggtg atttcaattt
     2041 gacgggtcag ctatggatga aaattctgag gagcccttac ccccacgcca aaattatcag
     2101 cattgatgcc agcaaagcgc ttgaaatgcc gggcgtcaaa gcggtcgtaa cggcggagga
     2161 tttcaacggc tggtcctggg gttggggacc gacgacccgc gatgaaacgc ctttggctga
     2221 cgaaaaggtt cgttattttg ctgaagcagt tgcagcggtc gctgccgaag atgaagaaac
     2281 cgccgaggaa gcctgcacac tcattaatgt tgtctacgaa gaattacccg gcatctttga
     2341 cgccgaagaa gcgatgcagg acggcgcgcc acaggtgcac gactatgtcg acaacaatat
     2401 cagctgggac tttcatatgg attacggcga tgtcgaggaa ggtttcgccg aggctgattt
     2461 tgtgcgggaa gatcgcttcg agaccggccg caccctgacc ggctttttgg agccaccggc
     2521 tgccgtggcg caagtcgatt cttcaggcat caccatttat gccgccaaac agagccctta
     2581 tttcatttat cgtcaactgg cgtcgtgctt caagttacct ttaagcaaag tccgcgttat
     2641 ccagccctat gtcgggggcg ggttcggcgg caccaa
//
LOCUS       DASCNL010000375         1340 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000807276, whole genome shotgun sequence.
ACCESSION   DASCNL010000375 DASCNL010000000
VERSION     DASCNL010000375.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1340)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1340)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000807276"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..793)
                     /locus_tag="QF359_05100"
     CDS             complement(<1..793)
                     /locus_tag="QF359_05100"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025010.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJO86317.1"
                     /translation="MALLLSALLGLVTSVQAQSTQRIVAIVNNEIITQFDLGTRIKFI
                     ILSSSLPKTKEMARRISSQVLSGLINDYLKLQAAKKMKVKTTQNKINHAIQNIEKNNQ
                     MQPGEMRKLLMQENVDWRTFELQIEAELAWRGAVARQVRSSIKIGDDAVDEAIATIEA
                     NKGKPEYFIAEIFIPFDPTKSIEVSRQTALGLRAQIQNGANFSALARSFSKSASAAKG
                     GNLGWIRSDQIDQNLSKIIVNMPKGSTTSPVQGADGFYILRLLNKR"
     gene            complement(855..>1340)
                     /locus_tag="QF359_05105"
     CDS             complement(855..>1340)
                     /locus_tag="QF359_05105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HJO86318.1"
                     /translation="GHLSDFVGRVNISPGSHLDLNYRTRLDKDNLSPKRNEVQMTAGS
                     PALKLSTNYVFFDSQDDSEFSGREEISGNVAAKLNRLWRSSFAGRYDLESEGGLRSLA
                     LNLTYECECFVFSTTLNRQFYADRDLQPNDTILFKLTFKTLGDVQSDSISITNFNNVD
                     G"
BASE COUNT          357 a          296 c          286 g          401 t
ORIGIN      
        1 tgcgtttgtt aagcaacctc aaaatataaa aaccatctgc accttgtacc ggactggttg
       61 tgcttccttt aggcatatta acaattattt ttgacaaatt ttgatcgatt tgatcgctgc
      121 gtatccagcc gagattaccg cctttcgctg ccgaggcgct ttttgaaaaa gagcgcgcga
      181 gtgccgaaaa attagcgccg ttttgaatct gggcgcgcaa tcccaaagct gtttggcgcg
      241 acacttcaat cgactttgtg gggtcgaaag gaataaatat ctcggcgata aaatattctg
      301 gcttgccttt atttgcctcg attgtcgcaa ttgcttcgtc tactgcgtca tcgccaattt
      361 tgatggagga ccttacttgt ctggccacag ccccacgcca agccaattcg gcctctattt
      421 gaagctcaaa tgtccgccag tcgacatttt cctgcattaa cagttttcgc atttcgccgg
      481 gctgcatttg attgtttttt tcgatattct ggatcgcgtg gttaatttta ttctgggtag
      541 ttttaacctt catttttttt gctgcctgca gtttcaaata gtcgtttatt aaaccgctta
      601 aaacctgact cgagatgcgt ctggccatct cttttgtttt tggtagactt gaagaaagaa
      661 taataaattt aatgcgcgtg ccgagatcaa attgagtgat tatttcattg ttcacaatgg
      721 caacaatgcg ctgagtcgac tgagcttgaa ctgaagttac gagaccaagg agggcagaca
      781 aaagcaaagc catcaggatc agacgtttgt ttgaactgat caaattgaag cccatagtcg
      841 ctattaaaaa ctgcttagcc gtcaacatta ttaaagttag taatagaaat actatccgat
      901 tgtacatcac ccaatgtttt gaaggtcagc ttgaacaata tcgtgtcgtt tggttgcaag
      961 tcccgatctg cataaaattg ccggtttagc gtcgtgctaa aaacaaagca ttcgcattca
     1021 taagttaagt ttaaggccag actccgtaat ccaccttcgc tctccagatc atatcgtccg
     1081 gcaaaacttg agcgccaaag ccgattaagt ttggctgcaa cgttgccgga aatttcctcg
     1141 cggcctgaaa attcagaatc atcctgactg tcgaagaaaa catagttagt tgaaagcttt
     1201 aacgccggag aaccggcggt catttggact tcgttacgtt tcggtgataa attgtcttta
     1261 tcgagacgtg tccgatagtt caaatcaaga tgactgcccg gagatatatt tacccggcca
     1321 acaaagtccg aaagatgccc
//
LOCUS       DASCNL010000376         6816 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000807574, whole genome shotgun sequence.
ACCESSION   DASCNL010000376 DASCNL010000000
VERSION     DASCNL010000376.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6816)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6816)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6816
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000807574"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(15..1325)
                     /locus_tag="QF359_05110"
     CDS             complement(15..1325)
                     /locus_tag="QF359_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HJO86319.1"
                     /translation="MSLEESGVPTVAVHTDAFARLAQSVAYANGMPTTRQTYVPQPIV
                     DKSPADLRAYVEGEDPISNRPFMQEVIEGLSHPLNDNDLNGMTFERMTPRLMDPNTED
                     NLQALFVENHWTDNLPIILPTEERVAAMLKGTSHSPDEIVGRLNPTAFREFWEFDVEK
                     VAVNAVMAGAKPEYFPVILALAASGVSARSSSTNSFATISLVNGPIRNEIGMNDGIGV
                     MGPYNHANSTIGRAHNLLSINLQGGSVPDDTYMGTLGNWYNYSSCFAEAEERSPWQPF
                     HVQQGFKPTDSAVSVFFGGWYTQAGYGPRETWQEKMRRALAACEQNIAPIFVLDPIVA
                     RGFVELGFDTKEKLANWCSENALLPAREYWDDQWIQTLKYPLAVAGVEPFASRLKAKP
                     DGLVSMYEPEDISIVVTGGETQGAWKMIAGEHRHGFTVSVDNWR"
     gene            complement(1359..1649)
                     /locus_tag="QF359_05115"
     CDS             complement(1359..1649)
                     /locus_tag="QF359_05115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86320.1"
                     /translation="MAEKITIHDPRGYPPKVTGKRLAPRLESLDGKVVFLVDCLFDNS
                     EVFMEQVQLWFAENLPAVKIRNIKPRESWVDDPEMRATVEAEGDAAILGVGL"
     gene            complement(1680..2612)
                     /locus_tag="QF359_05120"
     CDS             complement(1680..2612)
                     /locus_tag="QF359_05120"
                     /inference="COORDINATES: protein motif:HMM:NF019604.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO86321.1"
                     /translation="MVKEYDIVVAGGGIAGLTAGRAAAQTVLSTFMLTGNEFGGNLLS
                     IEKIDGFPGYPDGVAGYELCPITQGDAVQAGAELVPMGLLSLEQKDERWLVHTEAEDY
                     MGKAVILAMGASLRELDVPGAEKFKGKGVSHCASCDAPLLRGKIAVVIGGGDSALQEA
                     LTLVTAAAQVIILQQDDQLTAQNYYVDQVKANTKIKIRYNIDVEEIFGTETVEGVKVR
                     EQGSASSSLIAADGAFIYIGLAPNTRSVNGLLELDETGRIMVDENMRTEVPGLFSAGT
                     IRSRSTSRAAEAAADAVKAAEFAAHYIADGGWRA"
     gene            2747..4336
                     /locus_tag="QF359_05125"
     CDS             2747..4336
                     /locus_tag="QF359_05125"
                     /inference="COORDINATES: protein motif:HMM:NF012935.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HJO86322.1"
                     /translation="MEQLFDYIIIGAGSSGSVVAGRLSEDPEVSVCLLEAGPPDTSPF
                     IHVPTGIIKLSSHQKLNWLFMTKPQQSMNNRPLFTPRGKTLGGSSSINAMVYIRGNRL
                     DYDEWAALGNEGWAWSDVKPYFLKAEHNEQFADEHHSQGGPLNVTFPNIVSHLEKDFV
                     AASEALQYKHNPDFNGENQEGVGIHQATQKNGQRWSSSKAYLHPAMQRPNLTILTEAA
                     VKRVLLDNDRASGIELIDGRQLSAKREIIVSAGAIASPKILMLSGIGDPAELAPHGIE
                     LKHNLLGVGKNLQDHAVVGAIMSTKSRTPWGFSWPKLPYFGLEALKYIFARKGWFSAQ
                     LIESGGFIKSRPELERPDIQLVFVPGHRAVPPKVVEVGHGYSAFAVLLHPESRGVIKL
                     ASADPEDAPIIDPQFYSKEPDMDVLLWGLKECRRIVNNEVFQKYQPTESLPGKSAQTD
                     EELKEYIRNFGSTIFHPAGTCKMGSDDQAVVDHRLRVHGLKGLRVVDLSIVPKIVGGN
                     TNAPAIMIGEKAADMIKQDNT"
     gene            complement(4339..5004)
                     /locus_tag="QF359_05130"
     CDS             complement(4339..5004)
                     /locus_tag="QF359_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HJO86323.1"
                     /translation="MARPQIAWRAAQDIPDGAIVNLGIGMPLGIPNYIPAEREVILHS
                     ENGLLGMGPPAKEGEEDWELVNAGTLATTLLPGGSYFHHADSFAMIRGGHIDICALGA
                     FQIAANGDLANWNLGDGVRTPTVGGAMDLAVGAKRVFILTDHNARDGGAKIVEECTLP
                     LTGLTCVDRIYTDLAVIEVTATGLVVLEHIEDMSFEELQDKTGAELQQSADWKPLESP
                     DLD"
     gene            complement(5028..5717)
                     /locus_tag="QF359_05135"
     CDS             complement(5028..5717)
                     /locus_tag="QF359_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014753078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HJO86324.1"
                     /translation="MINKQVSNLTVALAEIENGATVMAGGFGDAGSPNDLIHGLLECQ
                     LKELTLIGNGVVAEDFGQGRLITAGCVDKYIASFPRGPGTTIFDAGTPTAHIELEVVP
                     QGTLAERIRAGGAGIPGFYTGTAFGTPLAAGKETRQIDGKDYVLEQAITADVALIMAK
                     HADRWGNLVYSKSGRNFNPIMAMGAKLTIVQVEEIVELGELDPETITTPGIFVDRVVE
                     VENPTTLYGEP"
     gene            5808..6740
                     /locus_tag="QF359_05140"
     CDS             5808..6740
                     /locus_tag="QF359_05140"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HJO86325.1"
                     /translation="MKAMVMHEFGGPEVLLAEDVPTPEIADGEILVDVKAVGLNPIDY
                     VARANGGPMRKSLEQSLPAILGWDIAGTVLETKSDQFQADDRVFALSKFPKITGGYAE
                     FAAVPADEAVIIPANLSFEEAAAVPLAALTAWQALVQTADIQAGQRVLIHAAAGGVGH
                     FAVQIAKHKGAYVIGTASAQKADFLSGLGIDEVVDYSTQDVAEVVSDVDIVLHALPPD
                     FRESVSWPCLKEGGLLLSLLGQVPEEETTKYKTRAAQIGVRPDQAQLKEIAGLLEDGT
                     FKVTLDKTYPLAEVGAAHSQIAERHTRGKVVLTV"
BASE COUNT         1656 a         1775 c         1718 g         1667 t
ORIGIN      
        1 caatctttcc aaacttaccg ccaattatcg accgaaaccg taaatccatg ccgatgttcg
       61 ccggcaatca ttttccaggc accttgggtc tcgccgcctg taacaacaat tgagatatct
      121 tccggctcat acatgctgac aagcccgtca ggtttggctt tcagccggct ggcaaaaggc
      181 tcgacgccag cgaccgccaa gggatattta agggtttgta tccattggtc atcccagtac
      241 tcacgcgccg gcaacaatgc attttcagaa caccagttag ccagtttttc tttggtatca
      301 aagccaagct caacaaagcc gcgggcaacg atcgggtcca agacaaagat cggcgcaata
      361 ttttgttcgc aggctgccaa agctcggcgc attttctcct gccaggtttc acgcggacca
      421 tagccagctt gggtgtacca gccgccaaaa aagacgctaa ctgcgctgtc ggttggcttg
      481 aacccctgtt gaacatgaaa cggttgccag ggtgagcgtt cctcggcttc ggcaaaacac
      541 gagctgtaat tataccaatt gcccaatgtt cccatatagg tgtcatccgg taccgagcca
      601 ccctgcagat taatcgataa taaattatgc gcccggccaa tggtcgaatt ggcgtggtta
      661 tagggtccca tcacaccgat cccatcattc atgccaatct cgtttctgat cgggccattg
      721 accagggaga tcgtggcaaa ggagttggtg ctgctggagc gcgccgacac accgctggcg
      781 gcaagagcca ggatgaccgg aaaatattca ggcttagcgc ccgccatcac cgcattaacc
      841 gcaactttct caacatcaaa ttcccaaaat tctctgaagg cggtcgggtt taggcggcca
      901 actatctcgt ccggtgagtg gctggtgccc ttaagcatcg ccgccacccg ttcttcggtt
      961 ggtaaaataa tcggcaaatt atcggtccag tgattttcga caaataaggc ttggagattg
     1021 tcttctgtat taggatccat caagcgtggt gtcattcgct caaacgtcat gccattcaga
     1081 tcattgtcgt taagcggatg ggacaaccct tcaatgacct cctgcatgaa aggccggttg
     1141 ctgatgggat cttcaccttc gacataggcc cgcagatcgg ctggtgattt atcgacaatt
     1201 ggttggggga cgtaggtctg gcgagtcgtc ggcatgccgt tggcgtaagc cactgattgc
     1261 gctaacctgg caaaagcatc ggtatgtacc gcgacagtag gcacaccgct ttcttctaat
     1321 gacatggcga gcccgacgac cgtcggactg caggtgcttc acaaaccaac cccgaggatc
     1381 gccgcatcac cctcagcttc caccgtcgcc cgcatctccg gatcatcgac ccagctttca
     1441 cgcggtttaa tatttcggat tttgacggcg ggtaaatttt cagcaaacca aagctgcacc
     1501 tgctccataa acacttctga attgtcgaac aggcaatcga caagaaagac aactttacca
     1561 tccaaactct cgagccgagg cgccagtctt ttgccggtga ctttgggggg atagccccgg
     1621 ggatcatgaa ttgtgatttt ttctgccatg gtttatcttc ctcaaataac catcaaatac
     1681 tatgcgcgcc agccaccgtc ggcaatatag tgtgcagcaa attcggcagc tttaactgca
     1741 tccgccgccg cttctgcagc tctgcttgtc gatctcgatc gtatcgttcc tgctgaaaat
     1801 aggccgggaa cttcggtgcg catgttttca tccaccatta tgcggccagt ctcatccaat
     1861 tcgagcaacc cgttgacgct tcgagtattt ggcgccagtc caatatatat gaaagcacca
     1921 tccgcggcga taagtgaaga ggaagcgctg ccttgttcgc ggactttaac accttcgact
     1981 gtttcggtgc cgaaaatttc ctcgacatcg atattatatc ttatcttaat cttggtattg
     2041 gctttgacct gatcgacgta ataattctga gcggttagct gatcatcttg ttgcaaaata
     2101 atgacctgag ccgccgcggt taccagggta agcgcctctt gtagggcgga atctccgcca
     2161 ccgataacga cagcaatttt gcctcgcagc aggggcgcgt cacagctggc gcaatggctg
     2221 acacctttac ctttgaattt ttccgcgccc ggcacatcaa gctcgcgtag gctagcgccc
     2281 atggctaaaa tcaccgcttt gcccatataa tcttcagctt cggtatggac cagccatctt
     2341 tcgtcttttt gctctaagct gagaagcccc atcggcacaa gttcagcgcc ggcttgaacg
     2401 gcatcgccct gggttatcgg acatagctca taaccggcaa cgccatcagg atagccggga
     2461 aacccatcaa ttttttcgat gcttaacaaa ttgccaccga actcattacc ggtcagcata
     2521 aaggttgaga gtacggtttg ggcagcggct cgtccggcag tcagaccggc aataccaccg
     2581 ccagccacca caatgtcata ttcttttacc aacaaatttt acttactgat tctacaaaaa
     2641 ttaaacttat agattagtcg atgatcaaca tccatcaaaa ggattgtcat cccttcaact
     2701 tattttaaaa taaaacccaa acaataatgc ttttggaggg atcgtggtgg agcaactatt
     2761 tgactacata atcattggtg cgggttcctc cggctcggtt gttgctggcc gtttgagcga
     2821 agatccggaa gtttccgttt gtctcttgga agccggacca cccgatacta gtcccttcat
     2881 ccatgtgccc accggcataa taaaactatc gtctcaccag aaattaaact ggttgtttat
     2941 gaccaagccg cagcagagca tgaataaccg gccacttttt acgccgcgcg gcaaaacctt
     3001 gggcgggtca agttcgatca atgcgatggt ttatattcgg ggcaacaggc ttgactatga
     3061 tgagtgggcg gcactcggaa atgagggttg ggcttggagc gatgttaaac cctatttcct
     3121 aaaggcagaa cataatgaac aatttgcaga cgaacaccac tcccagggcg gtccgcttaa
     3181 tgtgacattt ccaaacattg tcagccattt ggagaaggat tttgtcgccg cctccgaggc
     3241 tttgcaatat aaacacaatc cggattttaa tggtgagaac caggaaggcg ttggtattca
     3301 tcaagcgacc caaaaaaacg gacaacgctg gtcgagctcg aaagcctatc ttcatccggc
     3361 gatgcagcgg ccaaatctaa ccattctaac tgaagccgct gtaaaaaggg ttttgcttga
     3421 taatgatagg gcgtcgggga ttgaacttat tgacggcagg caactgagcg caaaacgcga
     3481 aattattgtc tcagccggtg ccatcgcttc gcccaaaatt cttatgctgt caggtatcgg
     3541 tgatccggca gagcttgccc cgcatggtat tgagttgaag cacaatcttt taggagtcgg
     3601 taaaaacctc caggatcatg ccgttgtggg agcgattatg agcaccaaat cccgcacacc
     3661 ctgggggttt tcctggccaa aattaccgta ctttggcctc gaagcgctta aatatatttt
     3721 tgcccgtaaa ggctggtttt cagcgcaact catcgagtcc ggcggtttta tcaaaagccg
     3781 gcctgaactt gagcgcccgg atatacagct ggtatttgtt ccgggccacc gtgcggtacc
     3841 gcctaaagtc gtcgaagtcg ggcacggcta ttctgccttt gctgtgctgc tgcacccgga
     3901 gagccgggga gtgatcaaac tcgcctcagc tgatcctgag gacgccccca ttattgatcc
     3961 gcaattctat tccaaagaac cggatatgga tgtgctgctg tgggggctca aagaatgccg
     4021 ccgcatcgtc aataatgagg tttttcaaaa ataccagcca accgaatctc tgccggggaa
     4081 aagcgcccaa actgatgagg agttgaaaga atatatccgc aatttcggca gcacgatttt
     4141 tcatccggcc ggtacttgta aaatgggcag cgatgaccag gcggtagttg accatcggct
     4201 tcgagttcat gggcttaagg gattgcgggt agttgatctc tcgatcgtgc ctaaaatcgt
     4261 tggcggtaat accaacgcgc cagcgatcat gattggcgaa aaagcagccg atatgatcaa
     4321 gcaggataat acttaaagct aatccaaatc cggtgattcc agtggcttcc agtcggcgga
     4381 ttgttgcaat tctgcgccgg tcttatcttg caactcttcg aacgacatat cctcgatatg
     4441 ttccaggaca accagaccag ttgccgtgac ttcaatgaca gcgagatcgg tataaatccg
     4501 atcaacgcaa gtgagaccgg tcaagggtag ggtgcattct tcgacaattt tagcgccgcc
     4561 gtcccgggca ttgtgatcgg tgaggataaa cacgcgcttg gcaccgacgg ctaaatccat
     4621 cgcgccccct acagtcggtg tgcggacgcc atcgcccaaa ttccaatttg ccagatcacc
     4681 attggcggca atttgaaaag cgcccaaggc acaaatgtct atgtggccac ccctgatcat
     4741 ggcaaaggaa tcagcgtgat gaaaatagct accgcccggc aatagcgtgg tcgccagggt
     4801 gccggcatta accagctccc aatcttcctc gccttctttg gcgggcgggc ccataccgag
     4861 taggccgttc tcgctgtgca ggatgacttc gcgctctgct ggaatatagt ttgggatacc
     4921 aagcggcata ccgatgccga gattgacgat ggcgccatcc gggatatctt gagcggcgcg
     4981 ccaggcaatt tgtggccgtg ccattccttt tttttggggg cctgctgtca tggctcacca
     5041 tataaagtgg ttgggttctc gacttcaacg acccggtcga caaatattcc gggggttgta
     5101 atggtttccg gatcaagctc gccgagctcg acaatttctt cgacttgaac aatggttaac
     5161 ttagcgccca tcgccatgat cggattaaag ttacggccgg attttgaata aaccagattg
     5221 ccccagcggt cggcgtgctt ggccataatt agggcgacat cggctgtaat ggcttgctcc
     5281 aagacatagt ctttaccatc gatctggcgg gtttctttgc ctgccgccaa aggtgtgcca
     5341 aaagctgtac ctgtataaaa tcccgggata cccgcaccgc cggcgcgaat gcgctcggcc
     5401 agagttcctt gcggcacgac ctccaattcg atatgtgctg ttggtgtccc ggcatcgaat
     5461 attgttgtgc cgggtcctct gggaaaagaa gcgatatact tatcaacaca gcccgccgtg
     5521 attaaccggc cttggccgaa atcctcagcg acgacgccat tgccgatgag ggttagttct
     5581 ttcagctggc actcaaggag accatgtatc agatcatttg gtgaacccgc atcaccgaac
     5641 ccaccggcca tcaccgttgc gccattttcg atttcagcca atgctacggt gagattggat
     5701 acttgcttgt tgatcataat atatgcagct aactttaatg agaaggtgag tttaaagcct
     5761 cagtgaatga aggcaatacc agtcaaataa aacgggaggg ttaaatcatg aaagcgatgg
     5821 tgatgcacga gtttggtggt ccggaggtct tgctggctga agatgtgcca acgcctgaaa
     5881 ttgccgacgg tgaaattttg gtcgatgtca aagccgttgg tctcaatccg atcgattatg
     5941 tggcccgtgc caatggcggc ccgatgcgga aaagtttaga gcaatcctta ccggcaattt
     6001 tgggctggga cattgccggc acggttctcg aaactaaatc ggatcaattc caagcggatg
     6061 atagggtttt tgcactctcg aaatttccaa aaattaccgg tggctatgcg gagtttgccg
     6121 ccgtacccgc cgatgaagcc gtcatcatac cggccaatct cagttttgaa gaagccgctg
     6181 ccgtgccgct ggccgccctt actgcctggc aggccttggt ccaaacagct gatattcaag
     6241 cgggccagcg cgtacttatc catgcggcag ctggtggggt tggacatttt gccgtccaga
     6301 ttgccaaaca taaaggcgct tatgtcatcg gtacggcctc agcgcagaag gcggattttc
     6361 ttagcggcct cggtatcgac gaagtagttg attactcgac acaagatgtc gcggaagttg
     6421 tgtctgatgt ggatattgtg cttcacgctc tgccgccgga tttccgtgaa agcgtctcct
     6481 ggccctgtct aaaagaaggt ggcttgctgc tttctttatt gggacaggtg ccggaggagg
     6541 aaacaaccaa atataagact cgggcggcgc agatcggggt tcgcccagat caagctcaat
     6601 taaaggaaat tgccggtttg cttgaagacg gcacttttaa agttacgctc gataaaacct
     6661 atccgctggc ggaagtcggc gctgcccaca gccaaatcgc agaacgtcac actcgcggca
     6721 aggtcgtatt gacggtataa aaacaaacag aagtaagagg cgaggaattc ttcaaactcg
     6781 attaaagcgt ttggactgtt tcagactttt tcaagc
//
LOCUS       DASCNL010000377         1280 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000808273, whole genome shotgun sequence.
ACCESSION   DASCNL010000377 DASCNL010000000
VERSION     DASCNL010000377.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000808273"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="QF359_05145"
     CDS             complement(<1..355)
                     /locus_tag="QF359_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014747837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HJO86326.1"
                     /translation="MTRHVAVLMGGWSTEREVSLVSGAAVSNALTEAGYRVTSIDVQR
                     DVGALLTRLYPKPDAVFNALHGRYGEDGCVQGLLNILDIPYTHSGVLASALAMDKPMA
                     KSIFEAVGIKVAEHKI"
     gene            complement(352..1269)
                     /gene="murB"
                     /locus_tag="QF359_05150"
     CDS             complement(352..1269)
                     /gene="murB"
                     /locus_tag="QF359_05150"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HJO86327.1"
                     /translation="MLAKLPAVKGRLKANADLSKSTWFRVGGPAEVMFQPRDLDDLVN
                     FLTDKPDDVPMTVIGIGSNLMVRDGGVPGVVIRLGEVFTDISVDGLEITAGGGVSNLR
                     LANAARDAGIKGFEFLTGIPGAVGGALRMNAGAYGAETKDIVQSVKAIDEHGQIVDLT
                     VADMKFSYRHSDAPDDLIFIEGRFKGETGTPAGIGARMKSIRVQREQSQPIKTPTSGS
                     TFTNPPDAKAWELIDQAGCRGLMRGGAVVSEKHCNFLINTGSATAADLEGLGEEVRHR
                     VFETSGVKLEWEIRRIGVAANPSIEEVSS"
BASE COUNT          322 a          392 c          285 g          281 t
ORIGIN      
        1 caattttgtg ttcggccact ttaatcccga ccgcttcaaa gattgattta gccatcggct
       61 tatccatcgc caaggccgac gccagcacgc ctgaatgggt atagggtata tcaagaatat
      121 tgagcagccc ttggacgcaa ccatcttcgc cgtagcgacc atgcagagca ttaaagacgg
      181 catccggttt ggggtagagc ctcgtcagca aagcgccaac atcacgctgt acatcaatcg
      241 aggtcacacg gtaaccagct tcggttaaag cgttactgac agctgcacca ctaaccagcg
      301 acacttcccg ctcagtcgac caacctccca tcaaaaccgc tacatgacgc gtcatgagga
      361 aacctcctcg atgcttggat tggcagctac gccgatacgg cgaatttccc attccaactt
      421 aacgccactg gtctcaaaca cccggtggcg gacttcctcg ccaagacctt caagatcagc
      481 cgccgttgcc gagccggtat tgatgaggaa attacaatgc ttttcagaga ccaccgcgcc
      541 gccgcgcatc aaacctcggc agccggcttg atcaataagc tcccacgctt tagcgtcggg
      601 gggattagta aacgtactgc cactggtcgg tgttttaatt ggttgcgact gctctcgctg
      661 cactcgaatt gatttcatcc gggcgcctat gcccgccggc gtgccagttt cccctttaaa
      721 ccggccttcg ataaaaatta gatcatccgg cgcatcggag tggcgatagc tgaacttcat
      781 atctgcgacc gttagatcaa caatttgacc atgctcatca atcgccttaa cactttgcac
      841 aatgtccttg gtttcagcac cataggcgcc ggcattcata cgcagcgctc caccgactgc
      901 gcccggaata ccggtcaaaa attcaaaacc cttgatgccg gcatcacgcg ccgcattggc
      961 aagcctgaga ttggatacac cgccaccagc ggttatttct aacccgtcga cagaaatatc
     1021 cgtaaacact tcaccgagtc tgatgacaac acccggcacg ccaccgtcgc gcaccatcaa
     1081 gtttgagccg ataccaatca ccgtcatcgg cacgtcatca ggcttatcag tcagaaaatt
     1141 aactaaatca tcaaggtcac gtggctggaa catcacttcg gctggcccac ctacccggaa
     1201 ccaggtcgat ttggagagat cagcattcgc cttcaatcgt cctttcacgg ccggaagttt
     1261 tgccaacaaa ccatcagaaa
//
LOCUS       DASCNL010000378         1404 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000808691, whole genome shotgun sequence.
ACCESSION   DASCNL010000378 DASCNL010000000
VERSION     DASCNL010000378.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000808691"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(148..>1404)
                     /locus_tag="QF359_05155"
     CDS             complement(148..>1404)
                     /locus_tag="QF359_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO86328.1"
                     /translation="RKPETLRELGETLAFMRQPEPPGGWKEAIGMLPLVKSAMAMKPK
                     TVSNAPVHEIVLEGDDIDLANLPIQTCWPDEPAPLITWPLVVTQDSSDSRSDNFNIGI
                     YRMQVTGKNTTLMRWLKHRGGAQHFAKHSEPMPVAVVIGADPGTILAAVAPVPDIMSE
                     YQFAGLLRNQKVELADCKTVPLKVPAQAEIVLEGHVSLDDFQDEGPYGDHTGYYNAVE
                     KFPVFTINAITMRKNPIYLSTFTGRPPDEPSVMGEALNELFIPLFIQQFPEVVDFWLP
                     PEGCSYRVAVVSIKKAYPGHAKRIMMGVWSYLRQFLYTKFVIVVDDDINVRKWEDVIW
                     AISTRMDPVRDITMIEGTPIDYLDFASPEPSLGGKIGLDATNKQPPETKRDWGVKIRM
                     TDEVIEKVSGMWDKLGLPGEGKSIWK"
BASE COUNT          332 a          362 c          354 g          356 t
ORIGIN      
        1 tactaagccg ttgagcaacc gccaaggact ggctttcaat gtgcaccgcg tcggcagcat
       61 cggcgccctt ggcttttgct ttagcgagca aatcttccag cagattgagc atgtttgagc
      121 tatcggtcat ttattatgtt tccaatttta tttccagata gatttgcctt ctccgggcag
      181 tccaagtttg tcccacatgc cggagacctt ctcaatcact tcatcagtca tgcggatttt
      241 aacgccccaa tcgcgtttgg tttcgggcgg ctgtttgttg gtagcatcga ggccgatctt
      301 gccgcctagg ctgggctcgg gcgaagcaaa atcgagataa tcaatcggtg tgccctcgat
      361 catggtgatg tcgcggaccg ggtccatacg ggtcgagatc gcccaaatga catcctccca
      421 tttgcgcacg ttgatatcgt catcaacgac aatgacaaat ttggtgtaga gaaattgcct
      481 caaataagac caaaccccca tcatgatccg cttggcatgg ccgggatagg ctttctttat
      541 tgaaacgaca gcgacccggt aagaacatcc ctccggcggc agccagaaat cgacaacttc
      601 cgggaattgc tgaataaaca gcggaataaa cagctcgttc aaagcttcac ccatgaccga
      661 cggttcatcc ggtggtcgcc cagtaaaggt cgagagataa atcgggtttt tgcgcatggt
      721 aatggcgttg atggtaaata ccggaaattt ttccaccgca ttgtaatagc cggtgtgatc
      781 gccataggga ccttcatctt ggaaatcatc caaggaaaca tgtccttcaa gcacaatctc
      841 cgcctgagcc ggaactttga gtggcacggt tttgcaatct gccagttcaa ccttttgatt
      901 tctcaaaaga ccggcaaact gatattccga catgatgtcc ggcaccggtg cgacggctgc
      961 taaaatagtg cccggatcgg cgccaataac tacggcgacc ggcataggtt ctgaatgttt
     1021 ggcaaagtgc tgcgcaccac cccgatgttt aagccagcgc atcagggtag tgtttttacc
     1081 tgtgacctgc atgcggtaaa tgccgatatt gaaattatca cttctgctgt cgctgctatc
     1141 ttgggtaacg accagcggcc aggtgatcag gggtgcgggt tcatccggcc aacaggtctg
     1201 gatcggcaaa ttagcaagat caatatcatc accttcgagg acaatttcgt gcaccggggc
     1261 atttgaaacg gttttcggtt tcatcgccat cgccgatttg accaacggca acatgccaat
     1321 tgcttctttc cagccgccag gtggttcggg ctgacgcatg aaagcaaggg tttcaccgag
     1381 ttcccgtaaa gtttcgggtt tccg
//
LOCUS       DASCNL010000379         1515 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000809170, whole genome shotgun sequence.
ACCESSION   DASCNL010000379 DASCNL010000000
VERSION     DASCNL010000379.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000809170"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1515)
                     /locus_tag="QF359_05160"
     CDS             complement(<1..>1515)
                     /locus_tag="QF359_05160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86329.1"
                     /translation="AIPEAVIAMLACARLGAVHSVVFGGFAANELAVRIDDCEPKVIV
                     SASCSIEVIKVIPYKPLLDEAIELAGHTPDHCIILERPMLECSLTAGRDVDWKAATDT
                     AEPHDCVAVAATDPLYILYTSGTTGEPKGVMRDNGGHAVALKWTMKNIYGVEPGEVYW
                     AASDVGWVVGHSYIVYAPLLNGNTTILYEGKPIGTPDAGAFWRVISEHNVGVMFTAPT
                     AFRAIKKEDPAGALIKDYDLANFRALFLAGERLDPDTLQWAEKSLGVPVIDHWWQTET
                     GWSICSNCLGIEALPVKQGSPTKAVPGMDLHVVDDNCEEVKAGDIGALVIKLPLPPGT
                     FPTLWNAKERYIDSYLAEFPGYYKTADAGFIDVDGYVFVMSRTDDIINVAGHRLSTGA
                     MEEVLAAHPDVAECAVIGVVDDLKGQLPLGFLVLSAGVERENSKIVKEVVAMVREQIG
                     PVAAFKTAIVVARLPKTRSGKILRGTMQKIADGEEYKMPATIEDVSVLPEIEQAL"
BASE COUNT          349 a          424 c          403 g          339 t
ORIGIN      
        1 cagcgcctgc tcgatctcgg gcaatacaga gacgtcttca atcgtggcag gcatcttgta
       61 ttcctcgcca tcggcaattt tctgcatggt gccccgcagg attttccctg agcgcgtttt
      121 tggcaggcgc gccacaacga ttgcggtttt gaacgccgcc accgggccaa tttgctcacg
      181 caccatcgcg acaacttctt tgacgatttt agaattttcc cgctctacgc cggcgctgag
      241 cacgaggaag ccaagcggca gctgaccctt aaggtcgtct acgacgccaa tgacggcgca
      301 ttcagcaacg tcaggatggg cagctaagac ttcctccata gcacccgtgg atagccgatg
      361 gccggcgaca ttaatgatat cgtcggtgcg agacatgaca aacacgtagc cgtctacgtc
      421 gataaatcca gcatcggcgg ttttgtaata tcccggaaat tccgccagat agctgtcaat
      481 gtaacgctcc ttagcattcc acagtgtcgg aaaagttccg ggcggcagtg gcagtttgat
      541 cacgagggcg ccaatgtcac ctgctttaac ttcttcgcaa ttatcgtcga caacgtgcaa
      601 atccattcct ggcacggctt tggttggcga gccttgtttg accggtaagg cctcgatgcc
      661 aagacagtta gagcagatcg accagcccgt ttctgtttgc caccaatgat cgatcacggg
      721 cacaccaaga cttttttcgg cccattgcaa ggtgtctgga tccaaccgtt caccagctaa
      781 aaacagcgct ctgaaattgg caaggtcata gtctttgatc agcgcgcctg cagggtcttc
      841 tttcttgata gcgcgaaagg cagttggcgc ggtaaacatc acgccgacat tgtgctcgga
      901 tatgacgcgc caaaaggcgc cggcgtccgg tgtgccgatc ggtttgcctt catagaggat
      961 ggtggtgttg ccgttgagta atggggcata aacaatatac gaatgaccga ctacccagcc
     1021 gacgtctgaa gctgcccaat atacttcgcc aggttccacg ccataaatat tcttcatagt
     1081 ccatttgagc gccacagcat ggccgccatt gtcgcgcatg acgcccttag gttcgccggt
     1141 cgtcccggag gtgtataaaa tatagagcgg gtcggtcgcg gcaaccgcga cacaatcatg
     1201 aggttcagcc gtatcggtcg ctgctttcca gtcaacatcg cgaccagcag tgagagagca
     1261 ttccagcatg ggccgttcca gaatgatgca atgatcggga gtatgacctg ccagctcaat
     1321 cgcttcatcc aacagcggct tgtaggggat caccttgatc acttcgatac tgcaggatgc
     1381 cgaaacaata actttgggct cgcaatcgtc gatgcggacg gcgagttcgt tggcggcaaa
     1441 tccgccgaac accacggaat ggacagcgcc aagccgggca caggccaaca tagcaatgac
     1501 ggcttcggga atcgc
//
LOCUS       DASCNL010000380         4876 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000809658, whole genome shotgun sequence.
ACCESSION   DASCNL010000380 DASCNL010000000
VERSION     DASCNL010000380.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4876)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4876)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4876
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000809658"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            501..635
                     /gene="rpmH"
                     /locus_tag="QF359_05165"
     CDS             501..635
                     /gene="rpmH"
                     /locus_tag="QF359_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HJO86330.1"
                     /translation="MKRTFQPSNLVRKRRHGFRSRMATVTGRRIIAKRRAKGRKSLSA
                     "
     gene            662..1036
                     /gene="rnpA"
                     /locus_tag="QF359_05170"
     CDS             662..1036
                     /gene="rnpA"
                     /locus_tag="QF359_05170"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HJO86331.1"
                     /translation="MAYPIERLKERPEFLRVASTRLRHAQPGLVLQMREHSENERYTE
                     KYEPIRLGFTVSKKVGNAVVRNRVKRRLRAVAAAVLPNHARPHRDFVIIGRQKAIKRS
                     FPELKADLKKALKKLDAYEEKS"
     gene            1033..1407
                     /gene="yidD"
                     /locus_tag="QF359_05175"
     CDS             1033..1407
                     /gene="yidD"
                     /locus_tag="QF359_05175"
                     /inference="COORDINATES: protein motif:HMM:NF013932.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HJO86332.1"
                     /translation="MTLVGHFFRGFFLLFIRAYQWLISPVLPGSCRHLPTCSQYAVEA
                     IDIHGPFLGFWLALKRVLRCNPWGSSSYDPVPLKTPGKNGTKITEKAVAEEPMHGYTE
                     RANSSNEINSQKFSATHTSGLP"
     gene            1436..3238
                     /gene="yidC"
                     /locus_tag="QF359_05180"
     CDS             1436..3238
                     /gene="yidC"
                     /locus_tag="QF359_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HJO86333.1"
                     /translation="MEQKNLFLAIALSALIMIGFQWWSASQRPPEETLTAEQQKAAQT
                     KPGTPSTPGTPATSTATPGSAPSAPAAPGMAVPVPGGADSTAQQAEVLRKALAASPRL
                     KIISPRLRGSISLVGARFDDLILNDYRETIEEGSKNISLLLPFGSANPYYADFGWVSA
                     DTKTPDAATVWTVNNQTLAPRSPVSLSWQNTDGVKFIQDISLDDNYMFTVKQRVVNSG
                     SKLVTVFPFGRISRTGTPEITDFYILHEGLLGVFDGVLKEIDYDEIQESKLIQNKSKG
                     GWIGITDKYWLTALIPDQKTAADNRFSDQLQKNLDNYQVDFRGAAQTIAPGATGETGS
                     RFFAGAKEAQLIIDYRDQLNITRFDLAIDWGWFEFLTKPIFFALAYFNGFLGNMGLSI
                     LLLTVLIKLAFFPLANKSYRAMSKMKLLQPEMLKLRERFKDDKARLNQEMMAMYKREK
                     ANPASGCLPILPQIPVFFALYKVVFVTIELRHAPFYGWIKDLSAADPLTPINLFGLIN
                     WTPPEILAIGVWPIIMGVTMFIQQKLNPPPPDPTQAKIFMFLPIMFTFMLARFPAGLV
                     IYWAWNNALSVLQQYVIMRKAGVPIGGGPSKKKS"
     gene            3272..3907
                     /gene="yihA"
                     /locus_tag="QF359_05185"
     CDS             3272..3907
                     /gene="yihA"
                     /locus_tag="QF359_05185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HJO86334.1"
                     /translation="METDTEAPDLESGRLLFTQNCDFLISAASFNQLPDTDLPEIAFA
                     GRSNVGKSSLLNTLTGRKNLARTSNTPGRTQQVNFFDLGGRMMLTDLPGYGYAKAAKS
                     VVDQWTRLIKSYLKGRVRLRRVCLLIDSRHGLKDTDREVMALMDEAAVAYQIVLTKCD
                     KIKATELEKLLAKTDKEITKHVAAHPEILVTSSFKSLGIEEMRAALATLAS"
     gene            4004..>4876
                     /gene="argB"
                     /locus_tag="QF359_05190"
     CDS             4004..>4876
                     /gene="argB"
                     /locus_tag="QF359_05190"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HJO86335.1"
                     /translation="MSKKEDKLKEKSLAQAAVLGEALPYMRRHAGETFVIKYGGHAMG
                     DKELAGLFAADIVLLAHVGINPIVVHGGGPQIAKMLDQLKIQSSFVDGLRVTDAATVE
                     VVEMVLAGTINKQIAAAINDAGGYAVGLSGKDGNLIKAAKVQRTQRDSDSNIEKILDL
                     GFVGEPKSISTHVLDVFKESDMIPVIAPIGAGEKGETYNINADTAAGAIAAAMTAKRL
                     LLLTDVAGVVDVDGKLISKMDAKQARQMIKDGAIQGGMIPKVETCLKAVDDGVDAAVI
                     IDGRAPHALLLELFT"
BASE COUNT         1265 a         1213 c         1200 g         1198 t
ORIGIN      
        1 cgcaataacc aagccaagtc ctgtgctatc ttttttagtt tagctaataa acagcgtaaa
       61 aagattgtct tttgctttat ccggcaagcc aggccatcat cctggacttt gacgcagacg
      121 gcgttttgtg gcttgggcga cacagagaca aaacggctcg gatttgtttg gtggattgag
      181 tctcattggc aagcttgctg ccggtgtttt cggtcatata atcctggaaa tctgttcaaa
      241 taatgaaata catacggggt ctctttttac ctttattata catgtaggta aatttggggc
      301 atttgttacg caatcgagcc tctttcctcc agtcaccatt gcgtgaagcc gatttgaaag
      361 ctttaattct ttgtgcgaag tatcgttgac ttatagggtc cgagaacgta tacaccgggc
      421 cttgctttta acggttcacc taatcctaaa gttttgtgga ttttagtata accgcaaaga
      481 aattttttcg gagaagttca gtgaaacgca cttttcaacc gagcaacctt gtgcgcaaac
      541 gtcgtcatgg cttccgctcc cgtatggcta ccgtcaccgg gcgtcgaatt attgccaaac
      601 gccgtgccaa aggtcgcaaa agcctttctg cctaacgccc tgagatcgtg gcggtccagt
      661 ggtggcctat ccaatagaac gcttgaaaga acgcccggag tttctgaggg tcgcttcaac
      721 gcgcctgcgc cacgcccagc ccggtctggt tttacaaatg cgtgaacata gcgaaaatga
      781 acgctatacc gaaaagtatg agccgattcg gctgggtttt acagttagta agaaagttgg
      841 caacgccgta gtcagaaacc gcgttaaacg gcgcctcagg gcggtggcag cggcggtgct
      901 gcccaaccac gcccggcctc atcgggattt tgttatcatc ggccgccaga aggcgattaa
      961 acggagcttc cctgaactta aggctgacct caaaaaagcc ctcaaaaagc ttgatgccta
     1021 tgaggaaaaa tcatgacttt ggtcgggcat ttttttcgcg gattttttct cttattcatt
     1081 cgcgcttatc aatggttgat ctcaccggtc ctgccgggtt cgtgccgcca tctgccgact
     1141 tgttctcaat atgccgtcga agcaattgat attcatggac cttttctggg cttttggctg
     1201 gccttaaagc gggttttacg ctgtaacccc tggggcagca gcagctatga tccggtgcca
     1261 ctaaaaacac ctgggaaaaa cggaacaaaa ataacggaaa aggcggttgc agaagagccg
     1321 atgcacggat ataccgagcg cgcaaattct tcaaatgaaa taaattcaca aaagttttcc
     1381 gccacacata cgtcgggact gccgtagaga gataaagtca ggaaattaaa aaaccatgga
     1441 acaaaaaaac ctgtttctcg ccatcgcgct gtcggccctc atcatgatcg gctttcagtg
     1501 gtggagcgcg agtcaacggc ctcccgagga aaccttaacc gccgaacagc aaaaagcggc
     1561 tcaaaccaaa ccgggtaccc catcaacacc gggcacgcca gcaacatcaa cagcgactcc
     1621 tggttcggca ccgagcgccc cggctgcgcc cggtatggca gttccagtac cgggtggagc
     1681 cgatagcact gctcaacagg ctgaggtgtt aagaaaggcc ctcgctgctt cgccacgatt
     1741 gaaaattatt tcaccccgcc tccgtggttc aatctcattg gtcggcgctc ggtttgatga
     1801 tcttattttg aacgactacc gggaaaccat agaggaaggc agcaaaaata tttccctgtt
     1861 gttaccgttt ggcagtgcta atccgtacta tgctgatttc ggctgggtct cggctgatac
     1921 caaaactccc gatgcagcaa ccgtctggac ggtaaacaat cagaccctgg caccccgatc
     1981 accggtatca ctgagttggc aaaataccga tggcgtaaag ttcattcagg acatttcact
     2041 ggatgacaat tacatgttca cggtcaagca gcgggtcgta aatagcggca gcaagctagt
     2101 cacggttttc ccctttggcc gtatctcccg gaccggcaca ccagaaatta ccgattttta
     2161 tatccttcat gaaggcctct tgggtgtctt tgacggcgtg ttgaaagaaa ttgactacga
     2221 cgaaattcag gaaagcaagt tgattcaaaa caaatccaaa ggcggctgga tcggcatcac
     2281 cgataaatac tggctgaccg ccctgattcc tgaccaaaaa acagccgccg ataatcgctt
     2341 ttctgatcag ctgcaaaaga atctcgataa ttaccaggtt gatttcagag gcgcggccca
     2401 aacgattgcc ccgggtgcga ctggcgaaac cggcagccgc ttttttgccg gcgccaaaga
     2461 agctcaactg attatcgact accgagatca gctcaacatt acccggtttg atctggccat
     2521 tgattggggc tggtttgaat tcctgactaa gccaatcttt tttgccctgg cttatttcaa
     2581 cggctttctc ggcaatatgg gtctttcgat cctactgctg acagtattga ttaagctggc
     2641 gttcttccca ctcgccaaca aatcctaccg cgccatgagt aaaatgaaac tgctgcagcc
     2701 ggaaatgctc aaactgcgcg agcgctttaa ggatgataag gcgcggttaa atcaagaaat
     2761 gatggcgatg tacaaacgcg aaaaagccaa cccggcttcc ggttgtttgc cgattttacc
     2821 gcagatcccg gtgttttttg cactttataa agtggtgttt gtcaccattg agctacgtca
     2881 cgcgccgttc tacggctgga ttaaagattt atccgctgcc gatccgctga cgccgattaa
     2941 tcttttcggt ttgatcaact ggacaccgcc ggagattctg gcaattggcg tctggccaat
     3001 cattatgggt gtgacaatgt ttattcagca aaaactgaat ccaccgccgc ccgatccaac
     3061 ccaggcaaaa atctttatgt tcctgccgat tatgttcacc tttatgctgg cccgtttccc
     3121 ggctggcctg gtgatctatt gggcctggaa caatgcgctt tcggtgctgc agcaatatgt
     3181 catcatgcgc aaagccggag tgccaatcgg tggtggtccc tctaagaaaa aaagctgacc
     3241 gctcgctcaa acacacgtta ggaaaggcct gatggagacg gatacggaag cacctgatct
     3301 tgagtctggc cgattattat tcacccaaaa ttgcgatttc cttatcagtg ccgcgagctt
     3361 taaccaacta ccggataccg atctacctga aatcgccttt gccgggcggt ccaatgttgg
     3421 caagtccagt ttactgaaca ctttaaccgg acgtaaaaac ctggcccgca cgtccaatac
     3481 ccccggacgc actcagcagg taaatttttt cgatctcggt ggccggatga tgctgaccga
     3541 tctgcccggc tacggttacg ccaaagccgc caaatcagta gttgaccaat ggacccggct
     3601 gattaaaagc tatctgaaag gtcgcgttcg attgcgccgc gtttgtttac tgattgattc
     3661 acggcacggc ctcaaagaca ccgaccgcga ggtaatggca ttgatggatg aagcggctgt
     3721 cgcctatcaa atcgtgttga ccaaatgtga taaaatcaaa gcaaccgagc tcgagaaatt
     3781 gctcgccaaa accgataaag aaattaccaa acacgtcgct gcacatccgg agatattagt
     3841 caccagctcg tttaaatccc tgggcatcga agaaatgcgg gcggccttgg caacgttagc
     3901 cagctaactt cataaaatca ttggtgattt tcactttgta tttcaggcga gttaggctaa
     3961 agtcgcgcgc ccaaatagga attatgaatt aaagcataga actatgagta aaaaagagga
     4021 caaacttaaa gaaaaatcac ttgcccaggc agctgtatta ggcgaagcgc taccttatat
     4081 gcggcgtcat gcgggtgaaa catttgtcat taagtatggc gggcacgcga tgggtgataa
     4141 agaactggca ggtctgttcg ccgctgatat cgtgctattg gcgcatgttg ggattaatcc
     4201 cattgtcgta cacggtggcg gtccgcaaat tgccaagatg ctggaccaac tgaaaattca
     4261 atcctctttt gtcgatggcc taagggtcac ggacgcagct acggtcgaag tggtggaaat
     4321 ggtattggcc ggcacgatca ataaacagat cgcggcagcc atcaatgatg cgggtggcta
     4381 tgccgttggc ctttcgggca aagacggtaa tttgattaaa gccgccaaag tccaacgcac
     4441 tcaacgcgac tcagattcaa atatcgaaaa aatactcgac ctaggttttg tcggcgagcc
     4501 gaaaagcatc tcaactcatg tattggatgt ttttaaagaa tccgacatga tcccggtgat
     4561 cgcaccaatt ggcgctgggg aaaaaggtga aacctataac atcaatgccg ataccgcagc
     4621 cggcgctatt gccgctgcga tgacagcaaa gcgtttactg ctgctcaccg acgtcgctgg
     4681 cgtcgttgat gtggatggta aactgattag caaaatggat gctaaacagg cccggcaaat
     4741 gattaaagat ggggcgatcc aaggcggtat gattccaaaa gttgaaacct gtctcaaagc
     4801 ggttgatgat ggtgtcgatg cggcagttat tattgacggc agagcgccgc atgctctgct
     4861 gctggagtta tttacc
//
LOCUS       DASCNL010000381         4763 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000810915, whole genome shotgun sequence.
ACCESSION   DASCNL010000381 DASCNL010000000
VERSION     DASCNL010000381.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4763)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4763)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4763
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000810915"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            236..652
                     /locus_tag="QF359_05195"
     CDS             236..652
                     /locus_tag="QF359_05195"
                     /inference="COORDINATES: protein motif:HMM:NF013257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HJO86336.1"
                     /translation="MEQFIALAKLQVATGQTPVFILGLQEIEWQAEITAIVPEALFPL
                     QQDGLGEAHNYAPQLTITLAQRLALATSNDSGTGHMLATGGAELISLFGRTVPEKFTP
                     MACNLTIIRAQDCGGREMDFIPVEALSEAIEEELVN"
     gene            complement(618..1970)
                     /locus_tag="QF359_05200"
     CDS             complement(618..1970)
                     /locus_tag="QF359_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO86337.1"
                     /translation="MSTRNWIQALSVYLDRRVLAMLFLGFSSGLPFGVLADPMTAWLA
                     GSGVGKTTIGLFALVSLPYALKFLWAPIMDRVPLPVITRMFGRRRGWVLVTQFVLIAA
                     IIKLGFFDPANSLWWTAVFALTVSFASASQDIVIDAYRIEILEEDQLAAGAALAINGW
                     RLAFWGGAAVALIFADLVSWQVVFTGLALTVSIGIVAILLNPEPSVPMSDEAVALERT
                     AENFLERNAHLPESITHAIAWLYGSVFCPFIEFLTRPNWLLIILFILLYKFGDAVLAV
                     MKIPFFLELGFSNTEIGTIAKLVGFPPIIIGGLFGGLLLAKTGIMRGLLVSGVLMAAS
                     NLVFVLQSWVGYSQEMLAITIAIENFTTGMGTVAFVAYLSSLCNIAYTATQYALLTSF
                     MAFSRTVMTSGSGWVADQVSWPVFFLLTTLAALPGLILLVYMIKRQPVNSPTLPQLPR
                     "
     gene            complement(1967..3052)
                     /locus_tag="QF359_05205"
     CDS             complement(1967..3052)
                     /locus_tag="QF359_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HJO86338.1"
                     /translation="MPAFCSPAKKRSDEPSGVLFISSGGLGDTVLLSLILDRLCQIAE
                     LDESITLILRHDAAKMAFLFGERIDIIPVDYTAFHKDRSYRKKTLNQLYKANYRLVVS
                     TDYLRHPKLDDAFVKACAAPEALAMEPRAWVKYDKELTKNRTLYSRLFDSGPVHLDKV
                     LRWSRFADWLTGTEQASPLVQLPEGRVNPGNAFTRPTVILVPFSAVKEKQSPPELFEQ
                     IMAYLGDEFDFVITGTSDDLDANLDFKPLLEWSNVEFDSAVFEILAPKLKQAHLVVSV
                     DTATMHLAVAVGAPIVCLASAAYVGEIVPYAPEIKPENVRFIYTPMDCEGCLGSCNLP
                     TEKGMFPCVAGLQETQILVAIDEVLAT"
     gene            complement(3058..3747)
                     /locus_tag="QF359_05210"
     CDS             complement(3058..3747)
                     /locus_tag="QF359_05210"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJO86339.1"
                     /translation="MVDFYDSYNRYKSYSTPDLHEKIIHQFDREFWLPVACTPEYSVL
                     EIGCGSGLFLSYLKHKKVKNFIGIDSDNELKNHIPDDVLAHFRNVNILDEAERTSINQ
                     KFDRIVMFDVLEHFEPNVAVNLLHNLAAMLNINGSIIVRLPNASSPWGLSYQFGDLTH
                     HAAYSPLSLRQLALAGGFECVKCFEQISGSPKRRLMDKIFHKFLSAILMSPPEIWSAN
                     FFGILERSIED"
     gene            complement(4149..4298)
                     /locus_tag="QF359_05215"
     CDS             complement(4149..4298)
                     /locus_tag="QF359_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86340.1"
                     /translation="MPQNMDDPFGLPFEDLPQILLIFSLPGAILLPHDRMPLNIFEPP
                     ISQSW"
     gene            complement(4298..>4763)
                     /locus_tag="QF359_05220"
     CDS             complement(4298..>4763)
                     /locus_tag="QF359_05220"
                     /inference="COORDINATES: protein motif:HMM:NF025912.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJO86341.1"
                     /translation="ASAIYNQILTQDSLNADAHAGQLKCLMAAGEMDQARNYLGGLTE
                     ELLTTEPISAVQTALELDEQTADTGEADELKAAVDASPDDHQARYDYALALYGGGQTE
                     AAIEELVEIFKRNRTWNDDAAKTQLLKIFEALGHADPITVEGRRKMSAVLFS"
BASE COUNT         1321 a         1191 c         1085 g         1166 t
ORIGIN      
        1 ccattatgga tcaactcgcg gacactcgcc ggcacaagcc cgacccgata ttcgtgaact
       61 ttaatttctt tcggtacgcc gatgcgcata gtccgctcct gttctaatac ttatatttaa
      121 acatagttcg ctaactcaga gaaacatcat aattttaacg cgccgtccta tgctactcaa
      181 ggcccacaat aactgatgac aatatgccaa aaacgatact cgtctatgct ggccgctgga
      241 gcaatttatc gccctcgcta aattgcaagt ggccaccggg cagacaccgg tttttatttt
      301 gggcctgcaa gaaattgagt ggcaagcaga gattacagcg attgtgccag aagcactgtt
      361 cccattgcaa caggatggtc tgggagaggc acataattat gcgccacaat tgaccataac
      421 actcgcccag cggttagcgc tggcgacatc caatgattct ggaaccggtc atatgttagc
      481 caccggtggg gccgagttga tctcactgtt tggccggacg gtgccggaaa aattcacgcc
      541 gatggcctgc aacctcacca tcatccgggc ccaggactgt ggcgggcgtg aaatggattt
      601 tatccccgtg gaagctctca gcgaggcaat tgaggaagag ttggtgaatt aaccggctgg
      661 cgcttaatca tatagaccag caaaatcagt cccggcaaag cggcaagtgt cgtcagtaag
      721 aaaaacactg gccagcttac ttgatcagcg acccagcctg agcccgaggt catcacggtt
      781 cttgaaaacg ccataaaaga tgtcagcagc gcgtattgcg tcgctgtgta ggcaatattg
      841 caaaggcttg aaagataggc gacgaaagcc accgtcccca taccagtggt gaagttttca
      901 atggcaatgg tgatcgctag catttcctgg ctgtaaccaa cccagctttg caagacaaag
      961 accagattgg atgcggccat gagcactccg ctgaccaata gtccccgcat gatcccggtt
     1021 ttcgccagca gcaagccgcc aaataagccg ccgataataa tgggcgggaa gccgaccagc
     1081 ttagcgatgg tgccgatctc ggtgttgcta aatcccagct caagaaaaaa tgggattttc
     1141 atcaccgcta ataccgcatc accaaattta tacagcaaga taaataaaat aatcagcagc
     1201 caatttggtc gagtgagaaa ttcgataaaa ggacagaaca cggagccata gagccacgcg
     1261 attgcgtggg tgatgctttc cggcaaatga gcattgcgct cgagaaagtt ctcggcagtt
     1321 cgttcaagag ctaccgcttc atccgacatg ggcacacttg gttcagggtt tagcaagatg
     1381 gcaacaattc cgatactaac ggtgagcgcc agaccggtaa aaacaacctg ccaggaaacc
     1441 agatctgcaa atatcagggc caccgcagca ccgccccaga acgccagccg ccagccattg
     1501 attgccagag ccgctccggc agctaattga tcttcctcca aaatttcaat ccggtaagca
     1561 tcaatgacaa tatcctggct tgccgatgca aatgaaaccg ttaaggcaaa cactgccgtc
     1621 caccaaagac tgtttgccgg atcgaaaaaa cctagtttta tgatggcggc gatcagcaca
     1681 aattgcgtga ccaacaccca gcctcgcctg cgcccaaaca ttcgggttat gactggtagc
     1741 ggcacccggt ccatgatcgg cgcccataaa aatttaaggg cgtagggcag gctgaccagc
     1801 gcaaacaagc caatagttgt tttaccgacg ccggatcctg ccaaccacgc tgtcatcgga
     1861 tccgccagca caccaaaggg caggccgctg gaaaagccca gaaacagcat cgccaaaacc
     1921 cgtcggtcca aatagacgct taaagcttga atccaatttc gcgtgctcat gtagccagca
     1981 cttcgtcaat ggcgactagt atttgcgtct cttgcagtcc ggcgacgcag ggaaacatac
     2041 ctttctcggt aggcaagttg cagctgccga gacaaccttc gcagtccatc ggcgtgtaga
     2101 taaaacgtac attttccggt ttgatctccg gtgcgtatgg cacaatctcg ccaacataag
     2161 cggcacttgc caaacaaacg atcggcgcgc caactgccac cgccaaatgc attgtcgccg
     2221 tatcgaccga aaccaccaag tgagcctgct taagcttagg cgctaaaatt tcaaaaactg
     2281 cgctgtcaaa ttcaacattt gaccactcca agagaggttt aaaatctaag ttggcgtcaa
     2341 gatcatctga tgtacccgta ataacaaaat caaattcgtc gccgagatat gccataattt
     2401 gctcaaacag ttcgggcggc gactgttttt cttttaccgc tgagaatggc accaggatta
     2461 cggtcgggcg ggtaaacgcg ttacctggat ttacccggcc ctccggcaat tgcaccaacg
     2521 gtgatgcttg ttccgttccg gtcagccaat cggcgaagcg tgaccagcgc agtactttat
     2581 ccaaatgcac tggtccactg tcaaaaagac ggctgtagag ggtgcgattt tttgtcagtt
     2641 ccttgtcata tttaacccag gcgcgcggct ccatggctag ggcttccggc gcggcgcagg
     2701 ctttaacaaa tgcatcatca agcttaggat ggcgcaaata atcggtgctt acaaccagcc
     2761 gatagttggc cttgtagagc tggtttaaag ttttcttacg atatgatcgg tccttgtgaa
     2821 aggctgtata gtcaaccggt ataatgtcaa ttctttcgcc gaataaaaaa gccattttgg
     2881 cggcatcgtg gcgtaaaatt aaagtgatag actcatcgag ttcggcaatt tgacagagac
     2941 gatcaaggat cagcgataac agaaccgtat cacccaatcc gccggaagag atgaacaata
     3001 cacccgaggg ttcatcgcta cgtttcttag ctggtgaaca aaacgcaggc ataaccatca
     3061 atcctcaata ctacgttcta aaatgccgaa aaaattagcc gaccatattt ccggtgggct
     3121 catcagaatc gccgatagga atttatgaaa tattttgtcc attaagcgcc gtttaggcga
     3181 gccggatatt tgttcaaaac atttgacaca ctcaaatcct ccggcgagcg ctaattggcg
     3241 gagacttagc gggctataag cagcatgatg agttagatca ccaaattgat aggatagtcc
     3301 ccacggtgat gaggcattcg gtaggcgcac aatgatcgat ccattaatat tcaacatggc
     3361 cgctaaatta tgcagcaaat taactgccac gtttggttca aaatgttcca acacgtcaaa
     3421 catgactata cggtcaaatt tttgatttat ggaagtgcgc tccgcttcat ctaatatgtt
     3481 tacatttcta aaatgcgcca aaacatcatc agggatgtga tttttcagct cattatctga
     3541 atcaattccg ataaaattct taactttctt gtgttttaga taactcaaaa acaacccgga
     3601 accgcagcca atttctaaaa ccgaatactc cggcgtgcaa gcgactggca gccaaaactc
     3661 tcgatcaaat tggtgaatga ttttttcgtg tagatcgggc gtactgtagg atttataacg
     3721 attatagcta tcgtaaaaat caaccatttt tctatctttt ctcgatattc aattcgttga
     3781 tcacaaccta atcagcgttc aattccaaag tatcaaacat acctttaaac gtatctattt
     3841 aattgttata gctacgtgaa taacaaaata actattccca ttttttttgg gaatgtacat
     3901 agttccaggt aactcaacgt caatctaata atccacccct aaaatatgtt ttttggtgtg
     3961 gcatcttgac tataaattca tttatcctca acgcatgcaa aaaaataaat tactttgact
     4021 tttttggtat gggatttatt gattccgatc tatctgtttc ccagactgta acattcatgg
     4081 ttaagtatta tttctttggc ataaatttgg agctaaaata gtcatgaaaa aatgctctgg
     4141 tactaatctc accaactttg agaaatcggc ggctcaaaaa tattgagcgg catgcggtca
     4201 tggggcagca gtatggcgcc cggcagggaa aagattagca ggatttgtgg caggtcttca
     4261 aaaggtaatc cgaaggggtc atccatattt tggggcatta cgagaacaac acagccgaca
     4321 ttttgcggcg gccctcaacc gtgataggat cagcatggcc gagcgcttcg aaaattttca
     4381 acagctgggt ctttgccgca tcgtcattcc atgtccggtt gcgtttaaaa atttcaacca
     4441 attcttcgat tgccgcctcg gtttgcccgc caccgtaaag cgctagagca taatcgtagc
     4501 gcgcctggtg atcatcggga ctagcatcga cggcagcttt aagctcatca gcctcgccgg
     4561 tgtcggcggt ttgttcatcc aattccagag cggtctgcac ggcagaaatc ggctccgtgg
     4621 ttaacagctc ttcggtgaga ccacccagat aattccgcgc ctgatccatt tcacccgccg
     4681 ccattaggca tttaagctga ccggcatggg cgtcggcgtt gagcgaatct tgcgtcaaga
     4741 tctgattata aattgcgctc gcc
//
LOCUS       DASCNL010000382         3018 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000811899, whole genome shotgun sequence.
ACCESSION   DASCNL010000382 DASCNL010000000
VERSION     DASCNL010000382.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3018)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3018)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3018
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000811899"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="QF359_05225"
     CDS             complement(<1..181)
                     /locus_tag="QF359_05225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86342.1"
                     /translation="MIKSGNNDLTAQEIYKLCSFFSVEANYIFDDLAEINNGNGELVF
                     NAHQAKELRRLFDSYL"
     gene            complement(267..695)
                     /locus_tag="QF359_05230"
     CDS             complement(267..695)
                     /locus_tag="QF359_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HJO86343.1"
                     /translation="MRRRTIKDDGPDPIDKYVGSRVRARRVGLRISQTKLGKAIGVTF
                     QQVQKYENGTNRISASNLFKISKTLGVDVSFFFEGVENLGESEIINLDLSDIPQVPFK
                     EDPMSSREAIELMHNYYRVTDKNVRKRLSQFIKTLAQSSS"
     gene            1291..2631
                     /gene="ffh"
                     /locus_tag="QF359_05235"
     CDS             1291..2631
                     /gene="ffh"
                     /locus_tag="QF359_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HJO86344.1"
                     /translation="MFDSLSDRFGDIFNRLKKRGALSESDVSETMREIRVALLEADVA
                     LPVVKEFIDSVKEQAIGHEVLKSVTPGQMVIKVVNDHLIEMLGPEDAEINLAATVPVP
                     ILMVGLQGTGKTTTTGKLALRLKNRDRKKVLVAGLDVARPAAQEQLAQLAKQAEVESL
                     ASVFGEQPVGIAKRAMDTGRREGFDVVILDTAGRLAIDHELMSEVAEIRNLVAPAETL
                     LVADALSGQDAVNVAKEFNEKIGITGIVLTRVDGDARGGAALSMRSVTGCPIKLMGVG
                     EKLDALESFQAERIAGRILGMGDVVGLVEKAAEVVDQEKAEKIAKRAMKGQFTLEDLQ
                     EQLAQVKKMGDLGGLMGMLPGVGKMKKQIEEANIDDRMIARQEAIILSMTPKERRNPK
                     LLNAKRRKRIAAGSGTNVQDVNRLLKQYQQMSSMMKKMGKKGMQGMMPPPGMKF"
     gene            2711..>3018
                     /gene="rpsP"
                     /locus_tag="QF359_05240"
     CDS             2711..>3018
                     /gene="rpsP"
                     /locus_tag="QF359_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HJO86345.1"
                     /translation="MATKIRLSRGGAKKRPFYRIVVADSRSPRDGRYIERVGTYNPMV
                     AKDHPERILLKEERIKHWLSHGALPTDRVARFLGDANIIEKPVRAEQTKQHLPREKTL
                     "
BASE COUNT          836 a          607 c          759 g          816 t
ORIGIN      
        1 tgagatatga atcgaatagc cgtcgcaact ccttggcttg gtgagcattg aataccaact
       61 ctccattgcc gttgttaatc tcggcgagat catcaaaaat gtagttggct tcgactgaaa
      121 agaacgaaca caatttataa atttcttgag ccgttaaatc attattgccg cttttaatca
      181 cttccaattg cttatatgat ttgttggctt atttagcgat acggctgtgg aaaattggta
      241 cttatttgtt taaatgagcg gtcaaattag cttgaacttt gggccaaagt tttgatgaat
      301 tgagacaatc ttttgcgaac atttttgtct gttacgcggt agtaattgtg catcaattca
      361 atggcctcgc gtgaagacat tggatcttct ttgaacggta cttgtgggat atccgacaaa
      421 tctaggttta tgatctctga ttcaccaaga ttttcaacac cttcgaaaaa aaaagacaca
      481 tcgacgccaa gggtcttcga gattttaaac aaattgcttg cacttattcg attggtgcca
      541 ttttcatatt tctgaacctg ttgaaacgta acaccgatgg ctttaccaag tttggtttgg
      601 ctgattctta atcccacacg ccgagcgcga actcgcgagc cgacatattt gtcaattgga
      661 tctggaccgt catctttgat tgttcttctt ctcataagcg actctccctc gagagcacta
      721 taatatgaca attacattta atcgattgat ttctttacat aaaattgaaa aatcatactt
      781 tactacctaa tgattcgata aatctgatca aataggtaca agccgaagag gtattgatgt
      841 aaacctacac atcctttcga taatcagtaa ttaaactgtt caaatatata tatttattta
      901 agtttagtac aaataatatt gcataaaata ttatgcttaa acggttgtta gattggcgga
      961 tatttgaagt gattttgata ttctggaacg taaatttgcc tattattagc tatgagaatg
     1021 atgctggtta ttcaaactga gtacaactat cagaaaattc ataggatttg cccatctgaa
     1081 atgttttttt aatggtaaat tgaggaacgt ttggagggtt gacttaccaa tcatcccgcc
     1141 ataaagtccg cgcccttacg aagaaaacta tctttgtgac gtctccaatt gaattatccg
     1201 tccagaactg agttgggttg gtgagggggc gccgtcagtc cgcgagtttc gcgcactggc
     1261 gttttttgct tgtttgttta ggaacgaaaa ttgtttgaca gtttaagcga taggttcggc
     1321 gatattttta atcgcttgaa gaagcggggc gcgctcagcg agtctgatgt atctgaaacc
     1381 atgcgtgaaa ttcgggtagc cttgctcgaa gccgacgtcg ccctgccggt ggtcaaagaa
     1441 tttatcgata gcgttaagga acaagcaatt ggtcatgagg ttcttaaaag cgtcacccca
     1501 ggccagatgg tcatcaaagt ggtcaatgat cacttgatcg aaatgctggg tccggaagat
     1561 gcggaaataa acttggcggc cacggtgcct gtgccgatcc tgatggttgg cttgcagggt
     1621 acgggtaaaa cgacaacgac tggcaaattg gccttgcggc ttaaaaaccg tgatcgcaaa
     1681 aaagtactgg tcgcagggct cgacgttgcc cggccggcag cgcaggaaca attggcgcaa
     1741 cttgctaagc aagctgaagt cgaaagttta gcttcggttt ttggtgagca gccggttggt
     1801 atcgccaagc gggcgatgga taccggccgc cgtgaaggct ttgacgttgt tattcttgat
     1861 accgcgggcc gtttagcgat tgaccatgag ctgatgagcg aagtcgctga aatacgcaat
     1921 ttggttgcac cggccgaaac gttgttggtg gctgacgcgt tgtccggtca ggatgcggtt
     1981 aatgttgcca aggaatttaa tgagaaaatc ggcatcactg gtatcgtgct gacccgggtt
     2041 gacggtgatg ccagaggcgg tgccgcactg tcgatgcgtt ctgtaaccgg ctgtccgatc
     2101 aagctcatgg gtgtcggcga aaaacttgat gcgctggaaa gcttccaggc ggaacgcatc
     2161 gccgggcgca ttctcggcat gggcgatgtt gttggcctgg ttgaaaaagc cgccgaagtc
     2221 gttgaccagg agaaagcaga aaaaattgcc aagcgggcga tgaaggggca attcaccttg
     2281 gaagacttgc aagagcaatt ggcgcaagtg aaaaagatgg gtgatctggg tggccttatg
     2341 ggcatgttgc cgggtgttgg taaaatgaaa aagcagattg aagaggccaa tatcgatgac
     2401 cgtatgattg cgcgccaaga agccatcatc ttgtcaatga cgcctaaaga acggcgcaat
     2461 ccgaaattac tgaatgcgaa acgccggaaa cgcattgccg cgggttcggg gaccaatgtt
     2521 caagatgtca accgtctgct gaagcagtat cagcagatga gttcgatgat gaagaagatg
     2581 ggtaaaaaag gcatgcaggg catgatgcca ccacccggga tgaaattcta aatgtaaata
     2641 cagtaactaa ccaaattatc ctttgagacc gttatttcag aggaaaaatt agcaagagga
     2701 aagtagatca atggcaacaa aaattcgttt atcgcgcggt ggcgcaaaga aacgtccatt
     2761 ttatcgcatt gtcgtcgcgg actcgcgtag tccccgtgat ggccgctata ttgaacgggt
     2821 cggaacttat aatccaatgg tcgccaaaga ccatccggag cgtatcctgc ttaaagaaga
     2881 acgtataaaa cactggttat cgcacggagc tttgccaacg gatcgggttg cgcgcttttt
     2941 aggcgatgca aacatcattg aaaaaccggt tcgggcagag cagaccaagc agcatttgcc
     3001 gcgtgaaaaa actttgga
//
LOCUS       DASCNL010000383         3052 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000817126, whole genome shotgun sequence.
ACCESSION   DASCNL010000383 DASCNL010000000
VERSION     DASCNL010000383.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3052)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3052)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000817126"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..3027
                     /gene="pyc"
                     /locus_tag="QF359_05245"
     CDS             <1..3027
                     /gene="pyc"
                     /locus_tag="QF359_05245"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004736 - pyruvate carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase"
                     /protein_id="HJO86346.1"
                     /translation="PEGEAEIKKLAEGIGYPVICKATWGGGGRGMRVIETADDLISLV
                     EQASREAEAAFGNGQVYLEKLVRNARHVEVQIMGDLYGNMVHMFERDCSVQRRHQKVV
                     ERAPAVFLDDEAREFLCQQGITIAKTADYQCAGTVEFLQDVDSDEIYFIEVNPRIQVE
                     HTVTEEVTGIDLVQAQILIAGGGKIGDIQASGVPAQEDIRLYGHAIQCRVTTEDPENN
                     FTPDYGRLTAYRSAAGFGVRLDAGTAFTGALITRYYDSLLVKVTSWASDETSAANRMD
                     RALREFRIRGVTTNLRFLESLINHPKFLVAEYTTNFIDETPELFEFPERRDRASRLLN
                     FVGNVIVNGNPEVKGHSLPAHATVPHAQKFGSAEVQPGSKQKLDELGPEKFAQWMLDQ
                     EGVLITDTTMRDAHQSLLATRVRSKDLIYIAPTYAHLLPEIFSMECWGGATFDVAMRF
                     LNECPWQRLADLREAMPNLLTQMLLRSANGVGYANYPDNVVRFFVKECAEGGMDLFRV
                     FDALNWVENMRVAIDAVRETDRLCEAAICYTGDITDPSRTKYDLKYYVDLAKELKDAG
                     AHILGIKDMAGLCKPDAAHLLIKALKEETGLPIHFHTHDTSGISAASVLAAVEAGADA
                     VDAAIDSMSGLTSQPNLGAIVDALKNSPRDTGLDTEALRSVSTYWEHVRTLYSSFEAD
                     FRSGASDVYAHEIPGGQYTNLRQQARSMGIDRRWPEVANTYAKVNEMFGDIVKVTPSS
                     KVVGDLTLLMITSDISAEDVINPDKEIAFPESVIQFFKGELGQPYGGFPENLQKKILK
                     DEEPITVRPGSIMEDIDLKSTKIEVSETVGREITDQELASYLMYPQVFTDYARHLEEF
                     GDVSKIPTTAYFYGMEAGDEIAIEMERGKTLIVRFLALGDANDDGSRIVFFELNGQPR
                     SLRIDDQSQESTRPVNRIADAGNPTHVGAPMPGLVSSVVIEAGQKVLQGDTLLSIEAM
                     KMETVVNAECDGVVGEVVATVGMQIGAKDLLVVFED"
BASE COUNT          717 a          784 c          835 g          716 t
ORIGIN      
        1 cccgagggcg aagctgagat taaaaaactc gccgaaggca tcggctatcc ggtgatatgt
       61 aaagcgacct ggggcggtgg tggccgtggt atgcgggtga tcgaaactgc ggatgatcta
      121 attagtttgg tcgagcaagc gagccgggaa gcggaagcgg cgttcggtaa tggtcaggtt
      181 tatcttgaaa aactggtgcg taatgcccgc catgtcgaag ttcagatcat gggtgacctc
      241 tatggcaata tggtgcatat gtttgagcgc gattgttcag tgcagcgccg tcatcaaaaa
      301 gtcgttgagc gcgcacccgc cgttttcttg gacgatgagg cgcgggagtt tctctgccag
      361 caaggcatta cgatagctaa aaccgctgat tatcaatgcg ccggaacagt cgaatttctt
      421 caggatgtcg atagcgatga gatttacttc atcgaagtaa acccgcgcat tcaggtcgag
      481 catacggtaa ccgaagaggt caccggcatt gatctggtcc aagcccaaat tcttattgcc
      541 ggcggcggta aaattggcga tatccaagcc agtggtgtgc cggcgcagga agatatccgc
      601 ctctatggcc atgcgatcca atgccgggtg acaacggaag atccggagaa taattttacg
      661 cccgattatg gccgccttac ggcctatcgt agtgccgccg gttttggtgt tcgccttgat
      721 gccggcactg ccttcaccgg cgctttgatc acgcgctatt acgattcctt gttggttaaa
      781 gtgacgagct gggcctctga tgaaaccagc gctgccaacc gcatggatcg agcgttgcgt
      841 gagtttcgca tccgcggcgt caccaccaat ctgcgtttcc tcgaaagcct gatcaatcat
      901 ccgaagtttc tggtggctga atacaccacc aactttattg atgaaacacc cgagctgttt
      961 gagtttccgg aacgccgcga ccgcgcttca cgcctgttga actttgtagg caatgtcatc
     1021 gtcaatggca atcccgaggt caaaggccat tcgctgccag cacacgccac cgttcctcat
     1081 gcgcaaaaat ttggcagtgc cgaagttcag cctggctcca agcaaaagct ggatgaattg
     1141 ggtccggaga agtttgctca gtggatgctc gatcaggagg gcgtactgat caccgatacg
     1201 accatgcggg atgcacacca gtccttactg gcgacccggg tacgttccaa ggatttgatc
     1261 tatatcgcgc caacctatgc gcatctcttg ccggaaatat tctcgatgga gtgttggggt
     1321 ggcgcgacct tcgatgtcgc tatgcgattc ctcaacgagt gcccctggca gcggctggcc
     1381 gaccttagag aagcgatgcc aaacctgctg actcagatgc tgctgcgctc ggccaatggc
     1441 gtcggctatg ccaattatcc cgataatgtg gtgcggttct ttgtcaaaga atgcgccgaa
     1501 ggcggcatgg atttattccg tgtctttgat gcgctcaatt gggtcgagaa catgcgggtc
     1561 gccattgatg cggtgcgcga aactgaccgg ctttgcgaag cggcgatatg ttacaccggc
     1621 gatattaccg atccaagccg gaccaaatat gatcttaaat attatgttga tctagccaaa
     1681 gagctgaaag acgccggtgc ccatattctc ggcatcaaag atatggcagg cctatgcaag
     1741 ccggatgcgg cgcacctact gatcaaagca cttaaagaag aaaccggcct gccgatccat
     1801 ttccacaccc atgataccag cggtatttcg gctgctagcg tattggctgc tgttgaagcc
     1861 ggcgccgatg cggtcgatgc agcgatagac tcgatgagcg gcctgacctc ccagcccaat
     1921 ctcggtgcaa ttgttgatgc gctcaagaat tcgcctcgtg atactggcct tgataccgag
     1981 gcgctacgct ccgtctcaac ctattgggag catgtgcgca cgctttattc cagttttgag
     2041 gccgatttcc gctctggcgc ctcagatgtc tacgcccacg agattcctgg cggccagtac
     2101 accaatctcc gccagcaggc gcgctcgatg gggattgacc ggcgctggcc agaagtcgcc
     2161 aacacctacg ccaaggtcaa tgaaatgttt ggtgatattg tcaaagtgac cccttcttcc
     2221 aaagtcgtcg gcgatttgac gctgttgatg attacctccg atatttcagc cgaagatgtg
     2281 attaatccgg acaaagaaat tgctttcccg gaatcagtga tccaattctt caaaggcgag
     2341 ttgggccaac cctatggtgg ttttccagaa aacttacaaa agaaaatcct caaagatgaa
     2401 gagccgatca ccgtccgtcc tggctcgatc atggaagaca tcgatctcaa atcgacaaaa
     2461 atcgaagttt cggaaacagt tggccgggaa ataactgatc aggaactggc atcttacttg
     2521 atgtatccgc aagtttttac cgattacgcc aggcatctcg aagagttcgg cgatgtcagc
     2581 aagataccaa ccaccgccta tttctatggt atggaagccg gtgatgagat cgccattgag
     2641 atggagcgtg gcaagacctt gatcgtgcgc tttttggcgt tgggagatgc caatgacgac
     2701 ggctcgcgca ttgtattttt tgaactcaac ggccagccac gctcactgcg cattgatgat
     2761 cagtcacaag aatcgacccg gccggtcaat cgcatcgctg atgcgggtaa tccaacccat
     2821 gtcggcgcac cgatgccggg gctcgtttca agcgtcgtca tcgaagccgg ccagaaagtc
     2881 ctacaaggcg acacattgct gtcgatcgaa gcgatgaaaa tggaaacggt ggtcaatgcc
     2941 gagtgcgatg gcgttgttgg tgaagtcgtc gccactgtcg gtatgcaaat aggcgctaaa
     3001 gatttgctgg tggtcttcga ggactaataa agcacctaaa ttttttgggc cg
//
LOCUS       DASCNL010000384         1370 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000819178, whole genome shotgun sequence.
ACCESSION   DASCNL010000384 DASCNL010000000
VERSION     DASCNL010000384.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000819178"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1370)
                     /locus_tag="QF359_05250"
     CDS             complement(<1..>1370)
                     /locus_tag="QF359_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019647173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HJO86347.1"
                     /translation="ELKETNSEAKRKKFVKRLKLVEAFINSGARPEWMILEVVPVIPP
                     ELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPEIIVRNEKRMLQESVDA
                     LFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELML
                     HQCGLPKKMALELFKPFVYSRLEKYAMATTIKAAKRMVDKERPEVWDILEEVIREHPV
                     MLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
                     SRVLMMSTNNILSPANGKPIIVPSQDIVLGLYYMTMKREGEKGEGMMLVNGEEIQHAL
                     NEGAVSLQAKITTRYETVDDDGNSIIRRVESTPGRMLLAELLPRHPNVPFELVNRLLT
                     KKDISLVIDEVYRHCGQKETVIFADRIMGLGFQNACQAGISIGKDDLVVPDSKVKLVD
                     ETEQLV"
BASE COUNT          355 a          368 c          310 g          337 t
ORIGIN      
        1 tacaagctgc tctgtttcat caaccaattt aactttcgaa tccggcacca ccaaatcatc
       61 tttaccgatg gaaataccag cctgacaggc gttctggaat ccaaggccca taatccggtc
      121 agcaaagatg accgtctctt tctggccgca gtgacgataa acctcgtcga tgacgagtga
      181 aatgtctttc ttagtcagca agcggttgac caattcaaac ggcacatttg gatgacgcgg
      241 taacaactca gccagcaaca tccggccggg ggttgattca actcggcgga taatcgaatt
      301 accgtcatcg tctacggttt cataacgcgt agtgattttg gcttgcagac taactgcgcc
      361 ttcattgagt gcatgctgga tctcttctcc attgaccagc atcatgccct cgcccttctc
      421 accttcacgt ttcatggtca tataataaag accaagcacg atatcctgag atggtacgat
      481 aattggctta ccattagccg ggctgaggat gttattggtt gacatcatca agacgcggga
      541 ttcaagttga gcctccaacg acagcggcac atggacggcc atttggtcac cgtcaaagtc
      601 agcgttaaac gcggtacaca ctaacgggtg aagttgaata gctttacctt cgatcagcac
      661 cggctcaaac gcctggatac ccaggcggtg aagtgtcggt gcccggttta acatcaccgg
      721 atgctcacga atgacctctt caaggatatc ccaaacttca ggacgttcct tatcaaccat
      781 gcgcttggca gctttaatag tcgtcgccat agcatatttc tcaagcctcg aatagacaaa
      841 cggcttaaac agctctagcg ccatcttctt cggcagcccg cattgatgga gcattagctc
      901 cggaccaacc acgatcaccg agcggccgga ataatcaacg cgtttaccta gcaagttctg
      961 acggaaacgg ccttgcttac ctttgagcat atccgacaaa gatttaagcg gacgtttgtt
     1021 cgcgccggta atggcgcggc cacgacggcc attatcaaac aaagcatcaa ccgattcctg
     1081 cagcatccgt ttttcgttac ggacaatgat ttccggcgcg cgcagttcga tcaatcgctt
     1141 taaacggtta ttccggttga tcacccggcg atagagatcg ttcaaatcag aggtcgcaaa
     1201 gcggccacca tctagcggca ccaaaggacg taattccggt ggaataaccg gcaccacttc
     1261 caggatcatc cattcgggac gggcaccgga attaataaac gcttcaacca atttgagacg
     1321 cttaacgaat tttttgcgct tagcttcgga attggtttct tttaattcaa
//
LOCUS       DASCNL010000385         3029 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000820056, whole genome shotgun sequence.
ACCESSION   DASCNL010000385 DASCNL010000000
VERSION     DASCNL010000385.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3029)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3029)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000820056"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..95
                     /locus_tag="QF359_05255"
     CDS             <1..95
                     /locus_tag="QF359_05255"
                     /inference="COORDINATES: protein motif:HMM:NF016231.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HJO86348.1"
                     /translation="KRPLPDDTLVADLKRQKLRIKDELASMHAL"
     gene            complement(520..1029)
                     /locus_tag="QF359_05260"
                     /pseudo
     CDS             complement(520..1029)
                     /locus_tag="QF359_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388810.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cell cycle transcriptional regulator TrcR"
     gene            1272..1454
                     /locus_tag="QF359_05265"
     CDS             1272..1454
                     /locus_tag="QF359_05265"
                     /inference="COORDINATES: protein motif:HMM:NF018413.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1192 domain-containing protein"
                     /protein_id="HJO86349.1"
                     /translation="MDTDDLEPIVKKPEIKDLEVMSIEALGEYIDELQTEIKRVEVEI
                     ELKKKARAGAEDVFKK"
     gene            complement(1629..2489)
                     /locus_tag="QF359_05270"
     CDS             complement(1629..2489)
                     /locus_tag="QF359_05270"
                     /inference="COORDINATES: protein motif:HMM:NF013098.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJO86350.1"
                     /translation="MIVLKDLCYIRLGTGDLAGAEQFTTSIIGLQAIRKSADRLYLRS
                     NYRDHSLCYFKGDPSDHMVGIELKDWLGLEDAMVTLEAAGYACTRGTAEEIEDRRVED
                     FCWFKDPTGNRIELVIRPYDANRRYFPSRDAGVVGLGHIGLNSTDPARDEAFWTTHFN
                     IRVSDWIGGCPLLRMKDIHHQIALFPTTKPGVQHINHQVEDIDDIMRSWYFFQEQQIK
                     IVFGPGRHATSGGYFLYYDGHDGMVFEYSNSDRFIIEDDENYRPRQFPMSAESFCVWG
                     SKPDIPEFQA"
     gene            complement(2631..>3029)
                     /locus_tag="QF359_05275"
     CDS             complement(2631..>3029)
                     /locus_tag="QF359_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HJO86351.1"
                     /translation="EFKHLEYYYFHNCLYEQVWKNNDRRHVDTIMTWDMLHTYPADYK
                     LIFVGDATMSPYEISYPGGSVEHWNEEPGAVWLNRILEIYSRSIWLNPVPEDYWHVTP
                     TIREISRIMGGRMFPLTLDGLDQGMRELTR"
BASE COUNT          794 a          734 c          686 g          815 t
ORIGIN      
        1 acaaacgccc ccttcccgac gatacgctcg tcgccgattt aaaacggcaa aaacttcgaa
       61 taaaagacga actggcaagt atgcacgcgc tttaaatagc gccgaaaaca aatacaccta
      121 gacaataatt actgtaacat tgcgattgca tctcgcctgc tagtcagttg cgcctgctga
      181 attatcttcc gtcggcttat tttctgcgga tgcgttttct gcagtacttt cttcgcccgg
      241 tttttcttca gctggtggat tttctactgc actttcttca gccggttttt cttctgctgg
      301 taccgccggt gcagtaccga agacatccga gctactagct tgctcgtctt ctttctgctt
      361 gggtgccgtt gctgcaccaa aaacgtcttc cgctgtcggt tccgtactta cagattcttt
      421 tggctgcgac ggaagaatgg ctggttcttc ttctggctca ctcgctgtaa tcggtggcaa
      481 gggttgggct ggagagtggg tcgtgcccgc ccgagtccgc gcaatagcaa tcattttctc
      541 taaatcagca gcgacacaaa gaccaagata aattggactt tgcggcttaa tgttagccga
      601 attgcgatga gttttatccc gcaccgcatt gatggttggc ttggtcgtac cgatgaggcg
      661 gctgatttgg gcgtcgctaa gttctggata actgcgcagc aaccatgaga ttgcatccgg
      721 gcgatcctgg cgtttagaaa taggtgtata gcgggcgcct ttttggcgta ctttcggcat
      781 cggcaccgat ggcttggcca tttccatccg cgctgtgaca tcagcttcac agcggacaat
      841 ttcgtcgcgg tttaattgac cattagcagt tgggtctagc ccctgcattc caggcgcgac
      901 ctcaccatcg gcaattgctt gaacttcgag attatgcaaa ccgcaataat cggcaatttg
      961 atcaaaagta agtgccgtat tatctactag ccaaacggcg gttgccttcg gcataagtgg
     1021 ctgagccatc ttccatttcc ctatattttg agtttcgggg gttgcttaag ctaatcaggc
     1081 ttttcacatg aacggaaata taaacctgcc ataaagctgc gtcaaaccat gcaaagcata
     1141 tttctggcat tttatttaca ttaaaatact aaaccaggcc ctaaaaaagg ttgtcatccc
     1201 ctgattatga tggagaaaat agacgctggt tactaaaaat agggtcgatt tatataattc
     1261 gggagcacgc tatggatacg gatgatctgg aaccaattgt aaaaaagccg gaaattaaag
     1321 acctcgaagt tatgtcgatc gaagcacttg gcgaatatat tgatgaactt caaactgaaa
     1381 taaaacgtgt tgaagtggaa atcgaattaa agaaaaaagc ccgggccgga gccgaggacg
     1441 ttttcaagaa ataacacaga ttattagcat ccactccgca aaccacaaaa gtgttaacga
     1501 aattttaatg ggctctgtat atcctaaagg ctgtcatagg ctcccttctt tcacatgaag
     1561 acttatgaca cctccctgtt aaactctagt cgctccacat tcggagcggc tttttttatt
     1621 agtgctgttt aagcttgaaa ttctggaata tcaggcttgc ttccccagac acaaaatgat
     1681 tctgctgaca ttgggaattg ccggggccga taattctcat catcttcaat gataaatcga
     1741 tcagagttcg aatactcgaa caccatacca tcatgaccat cataataaag aaagtagcca
     1801 cccgaggtcg catggcgtcc cgggccgaaa acgatcttga tttgctgctc ctgaaagaaa
     1861 taccacgacc gcattatgtc atcgatatcc tcgacttggt gattgatgtg ttgaacgcct
     1921 ggtttggtcg tcgggaaaag cgcgatctga tgatgaatgt ctttcattct caaaagcgga
     1981 catccaccga tccaatcact cactctgata ttgaaatggg ttgtccaaaa tgcttcatcc
     2041 cgcgctggat cagttgaatt caagccaata tgcccgaggc cgaccacgcc ggcatcgcgc
     2101 gatggaaaat agcggcggtt ggcatcatac gggcggataa cgagttctat acgatttcct
     2161 gtcgggtctt tgaaccagca gaaatcctca acccggcggt cttcaatttc ttccgctgtt
     2221 ccccgggtac aagcgtatcc agccgcttcg agagttacca ttgcgtcttc aaggccaagc
     2281 cagtctttaa gttcgatacc aaccatgtga tcagatggat cacctttgaa gtagcacagc
     2341 gaatgatccc ggtagttgct gcgaagatat agacggtcag cagacttccg gatcgcttga
     2401 aggccgataa tgctggtcgt aaattgctcg gctcctgcca aatccccggt gcctaatcga
     2461 atatagcaaa ggtctttgag aacaatcatt tatctgatcc aaattgtaag aatgatgtca
     2521 gcagaatatt tggcatgact tagtttgtca aagatgcttt gctcggtgga tgaaagcgaa
     2581 gcaatcagcc agtccaaaat caacgcctta atcgactaag ctttcatcat ttagcgtgta
     2641 agttcccgca tgccttgatc caaaccatcg agtgtcaatg gaaacatccg cccccccatt
     2701 attcgactga tttcacgaat agtcggcgta acatgccaat aatcttccgg caccggattg
     2761 agccagattg agcggctgta aatttccaaa attcggttga gccaaaccgc ccccggctct
     2821 tcattccagt gctcgacact gccgcccgga taggagattt cgtaggggct catagtcgca
     2881 tcgccaacaa atatcagctt gtaatcggcc ggataggtat gcagcatatc ccaggtcatg
     2941 atcgtgtcga catggcggcg gtcattgttt ttccacacct gctcatacaa gcaattatga
     3001 aaataataat attcgagatg tttaaattc
//
LOCUS       DASCNL010000386         1649 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000824249, whole genome shotgun sequence.
ACCESSION   DASCNL010000386 DASCNL010000000
VERSION     DASCNL010000386.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000824249"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="QF359_05280"
     CDS             <1..265
                     /locus_tag="QF359_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HJO86352.1"
                     /translation="KLESLDKLHGFFARLERPVDFDSIDERPVDLIFLLLAPESAGAD
                     HLKALAQVSRLLRDKANCDKLRGSDSPEALYALIIEQEAHRAA"
     gene            complement(300..545)
                     /locus_tag="QF359_05285"
     CDS             complement(300..545)
                     /locus_tag="QF359_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86353.1"
                     /translation="MTQYDDPVANNAAIELHGDFTGGEFIYLGLDEIAYIKPVEENGE
                     HAFGIFAADGEQIGAAPDYKLACAVSIQNDLYPVSVH"
     gene            complement(568..1050)
                     /locus_tag="QF359_05290"
     CDS             complement(568..1050)
                     /locus_tag="QF359_05290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HJO86354.1"
                     /translation="MSRQPVFDSPLLLGFDHFERVLDRVTKSSAEGYPPYNIEQVSEE
                     ELRITLAVAGFSMDDLEVTTEDNQLVIRGRNSEDESARIYLHRGIAARQFQRSFVLAE
                     GIEVVAARLEDGLLHIDLARPIPEPEVRKIKIEKVQSSAKTSAKTIDLDPESPIVSGN
                     "
     gene            complement(1300..1542)
                     /locus_tag="QF359_05295"
     CDS             complement(1300..1542)
                     /locus_tag="QF359_05295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86355.1"
                     /translation="MTIDGVASDSTVLNLDITDIATIDAVLAQVRSTAETLEPEANVL
                     SIREEFNNKLINSLEKGEAKLLEADLNEQATTALSL"
BASE COUNT          417 a          425 c          381 g          426 t
ORIGIN      
        1 caagcttgaa tccttagata aattacacgg cttttttgcc cgcctcgaac ggccggtaga
       61 ttttgattca attgatgagc gtccggtcga tctgatcttc ttgctgctcg caccggaatc
      121 agccggggcg gatcatttaa aggccttagc gcaagtttca cgcctgctcc gggacaaagc
      181 caattgcgat aaactgcggg gctctgacag tcctgaagca ctttacgcgt tgatcatcga
      241 acaggaagcg caccgcgccg cctgaccgcc aatttcaaca atattaagtg gacaaccggt
      301 tagtggacgc taaccggata taggtcgttc tgaattgata cggcgcaggc cagcttatag
      361 tcaggagccg cgccgatttg ctcgccatca gcggcaaaaa taccgaaggc gtgctcaccg
      421 ttttcttcaa caggtttgat ataggctatt tcatccagtc cgagatagat aaactcgccg
      481 ccggtgaaat caccatgcaa ctcgatggcg gcgttatttg ctactggatc atcatactgc
      541 gtcattttga gacctattct tgttttctca atttccagat acaattggac tttccgggtc
      601 caagtcaatt gtcttagcgc tggttttagc acttgattga actttctcaa tcttaatttt
      661 gcgaacttcc ggttccggaa tcgggcgtgc caaatcaata tgcaacaagc catcctcaag
      721 ccgtgcggct acaacttcaa ttccttccgc caacacgaag ctgcgctgga attggcgggc
      781 ggcaatgccg cgatgaagat agatgcgtgc cgattcatct tctgaattac ggccccggat
      841 caccagctga ttatcctcag tggtgacttc cagatcatcc atcgaaaagc cagcaaccgc
      901 cagggtaata cgcaactctt cttcactaac ttgttcgata ttgtagggtg gatagccttc
      961 ggcggaagat ttcgtgacgc gatccaagac gcgttcaaaa tgatcaaatc ccaacagcag
     1021 tgggctatca aaaaccggct gacgagacat cgaacccctc ctctaaaagc gagctttggc
     1081 ttaaaaaggc ccttaagcgg cgcctttcag ccaaatattc tgcaattttt cgaacgctgc
     1141 cgcgaccaat taagtccctc ggcatatccg ctcgaacata gtctaatttg gcagattaat
     1201 gcgccccgtc aaggggggta ttacctaaaa gagtcgctgg atagtgcgct cggattgagc
     1261 tgttacctta agcgcttagg cggataattg ggtacgcgtc tacaacgaaa gtgcagttgt
     1321 agcctgctcg tttaaatcgg cttcgagcag ctttgcttca cctttttcaa gcgagtttat
     1381 cagcttgttg ttaaattcct cacgaatcga tagcacgttt gcttcaggtt ccagcgtttc
     1441 agccgtcgaa cggacctgcg ccagaacagc atcgatggta gcaatatcgg taatatccag
     1501 attaagcacc gttgaatccg aggcaacgcc atcaattgtc acgccagtta aaccgtcttc
     1561 attgaactac cttgacattc atcaatgcca acctctcaac ttggcgttat tagttaaaaa
     1621 ataatgcaac aggctaatgc agagggtgg
//
LOCUS       DASCNL010000387         2821 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000828246, whole genome shotgun sequence.
ACCESSION   DASCNL010000387 DASCNL010000000
VERSION     DASCNL010000387.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000828246"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="QF359_05300"
     CDS             <1..632
                     /locus_tag="QF359_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJO86356.1"
                     /translation="KSVRDGEGFDIWTSVVVIIGNAIPNFLFAILLVVLFAGGSFLDI
                     FPLRGITSPNWDELSIIGKVLDYFHHMILPITALVIGGFAGLTMLTKNSFIEEINKQY
                     VVTARSKGLEEKRVLYGHIFRNAMLIVIAGFPSAFIGILFTGAMLIEIIFSLDGMGLL
                     AFEAVINRDYPVMFGTLYVFTILGLIMALIGDIAYHVVDPRIDFEANEV"
     gene            638..1660
                     /locus_tag="QF359_05305"
     CDS             638..1660
                     /locus_tag="QF359_05305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO86357.1"
                     /translation="MTPINQRRLVNFKANRRGYISFWLFLIMFVVTIFAEFIANDKPL
                     LINYDGGYFMPVLKAYPETTFGGDFETEAEYSDPEVIELIEEKGWVVWPLIPYSFGTI
                     VYNLPSPAPSPPTIQNWLGTDDQGRDVVARLIYGFRISVLFGLILTFFSSIVGVAAGA
                     WQGYFGGLTDLLFQRFMEIWSGLPQLLLLIILASLFVPSFWMLLGILLLFSWMALVGV
                     VRAEFLRGRNFTYILAARALGVSNRKIMFKHILPNAMVATVTFLPFILSGAITSLTAL
                     DFLGLGLPPGSASLGELLNQGKANLQAPWLGISAFVVLSIMLSLLIFIGEAVRDALDP
                     RKTFRN"
     gene            1664..>2821
                     /locus_tag="QF359_05310"
     CDS             1664..>2821
                     /locus_tag="QF359_05310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86358.1"
                     /translation="MSNLLKVGNLSVSFGKDDKEVKAVQNVSFDMKRGETIALVGESG
                     SGKSVTALSIMKLLPYPVAWHPQGSIEFDGEELMQADESQMRAIRGNRISMIFQEPLN
                     SLNPLHNVEKQINEVLHLHKNMTPGQARARVEELLNLVGMPEAKSRLHSFPHEFSGGQ
                     QQRIMIAMALANEPELLIADEPTTALDVTIQAQVLKLLKELTRKFDMGLLMITHDLGI
                     VQRMADKVHVMNEGQVVEHNETKTLFANPSHDYTQHLLSAAPKGRPDPVKPIAHEVMK
                     AKDIRVWFPIKRGVIKHTVGHIKAVDGISMTLLEGQTIGVVGESGSGKSTLGRAILRL
                     ESSKGGIDFMGHNVQKYGWKAMRPLRREMQIVFQDPFGSMSPRMSVFQVIEE"
BASE COUNT          641 a          715 c          705 g          760 t
ORIGIN      
        1 caaaatctgt ccgcgatggt gaagggtttg atatatggac cagtgttgtc gttatcatcg
       61 gtaatgccat tcccaatttt ttgttcgcga ttttattggt tgtgctcttt gccggcggca
      121 gcttcctgga tatttttcca ctcagaggca tcacctcacc taattgggat gagttatcaa
      181 ttatcggcaa agtactcgat tattttcatc acatgatttt gccgatcacg gccctggtca
      241 tcggcggctt tgccggcctc accatgctga ctaagaactc ctttatcgag gaaatcaaca
      301 agcaatatgt tgtcaccgcg cgctccaagg gccttgaaga aaaacgcgtg ctttatggtc
      361 atatttttag aaacgctatg ctgattgtga tcgccggttt cccaagcgcc tttatcggca
      421 ttttatttac cggcgccatg ttgatcgaga ttattttttc gctggatggc atgggcttac
      481 tggcttttga ggcggtcatc aatcgcgact atccggtcat gttcggcacg ctttatgtct
      541 tcaccatatt gggtctcatc atggctttga tcggtgatat tgcctatcac gtggttgatc
      601 cgcggattga tttcgaagcg aacgaggtct gatccagatg accccgataa atcagcgccg
      661 tcttgttaac ttcaaagcca accgccgggg ctatatatca ttttggctat ttcttattat
      721 gttcgtcgtt acgatctttg ccgagttcat cgccaatgat aagccgctac tgattaacta
      781 tgacggcggc tattttatgc cagttttaaa agcctatccg gaaaccacgt tcggcggcga
      841 ttttgagacc gaagccgaat actcggaccc ggaagttatc gaattgatcg aagagaaagg
      901 ctgggtcgtt tggccgctca ttccctatag ctttggcacc attgtctaca atttgccgag
      961 cccggcgcct tcgccaccga caatacaaaa ttggctcggc accgatgacc agggccggga
     1021 tgttgtcgcc cgtttgatct atggtttccg tatttcggtg ttgttcggcc tcattttgac
     1081 gtttttcagc tcgatcgtcg gcgttgccgc cggcgcctgg caaggctatt tcggcgggct
     1141 gacagatttg ctgtttcaac gcttcatgga aatatggtcc ggcctgccac aattgctgct
     1201 attgatcatt ttggccagtc tgtttgtacc aagcttttgg atgttgctgg gaatcttact
     1261 gttgttcagc tggatggctt tggtcggcgt ggtgcgggcg gagtttctgc ggggacgtaa
     1321 ttttacctat atcttagcgg cccgcgccct cggcgtttcc aaccgcaaaa taatgttcaa
     1381 acacatccta cccaatgcga tggtcgcaac cgtcaccttt ctgccattta tcctgtcggg
     1441 cgccatcacc agtctaactg cattggattt cttagggtta ggtctgccac ctggttcggc
     1501 gagcttgggc gaactgctca atcaaggtaa agcgaatttg caggcaccgt ggctcggtat
     1561 atcagcattt gttgtgctgt cgatcatgtt gagcctgttg atcttcatcg gcgaagcggt
     1621 gcgtgacgcg cttgatcccc gcaagacctt taggaactga tcaatgagca acctcctaaa
     1681 agtcggcaat ttatcggtca gctttggcaa agatgacaaa gaagtcaaag ccgttcaaaa
     1741 tgtttccttc gatatgaagc gcggtgaaac cattgcactg gtcggtgaat ccggctccgg
     1801 taaatctgtt accgcgctga gcataatgaa attattgccc tatcccgttg cctggcatcc
     1861 ccaaggcagc attgaatttg atggtgaaga attgatgcag gcagatgaaa gtcaaatgcg
     1921 cgccattcgt ggcaatcgca tttcgatgat tttccaagaa ccgctcaact ctctcaaccc
     1981 gctgcacaat gtcgaaaaac agatcaatga ggtgctgcat ttgcataaaa acatgacgcc
     2041 gggccaagcc cgagcccggg tcgaagaact gctcaatctg gttggtatgc cggaagcgaa
     2101 atcccgcctc catagctttc cgcacgaatt ttccggcggc cagcagcagc gcatcatgat
     2161 cgccatggcg ctcgccaatg agccggaatt gctgatcgcc gatgagccaa ccaccgcact
     2221 cgatgtcacc attcaggcac aggtgttgaa attactgaaa gagctcaccc gcaaatttga
     2281 tatgggcctt ctcatgatta cccacgatct tggcatcgtg cagcgcatgg ccgataaggt
     2341 tcacgtgatg aatgaaggcc aggtagtcga gcacaacgaa accaaaacat tatttgctaa
     2401 tcccagccac gactataccc agcatttgct ctccgccgca cccaaaggcc gccccgatcc
     2461 ggttaaacca attgcccatg aagtgatgaa ggccaaggac attcgcgtct ggttcccgat
     2521 caagcgtggt gtaattaaac acactgtggg tcacattaag gccgtcgacg gcatttcaat
     2581 gaccttgctt gaaggccaga ccatcggcgt ggtcggtgaa tcaggttctg gtaagtcgac
     2641 cctcgggcgg gcgatactgc gtctcgaatc gagcaaaggc ggcattgatt tcatgggtca
     2701 caacgtgcag aaatacggct ggaaggcgat gcggccctta cgccgggaaa tgcaaatcgt
     2761 ctttcaagat cccttcggtt caatgagccc gcgtatgtca gtttttcaag ttatcgaaga
     2821 a
//
LOCUS       DASCNL010000388         1341 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000829367, whole genome shotgun sequence.
ACCESSION   DASCNL010000388 DASCNL010000000
VERSION     DASCNL010000388.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1341)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1341)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1341
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000829367"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="QF359_05315"
     CDS             <1..556
                     /locus_tag="QF359_05315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015089054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HJO86359.1"
                     /translation="PAALGVGPDNGSAAEKSGGIVYIDPRLRDIGARAMMPAETLNST
                     LSELGFKAAAFADYEHLRLSLGLPDGSRDLEVDKSILLENGFEELHGVDFHKGCYIGQ
                     ELTARTKHRGLVKKRLIPVNFDGDAPVAGTEITQDGKNAGEIRSTAGGQGLALVRLDS
                     LASSVPLMVGDIPVTPNKPQWANF"
     gene            784..987
                     /locus_tag="QF359_05320"
     CDS             784..987
                     /locus_tag="QF359_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86360.1"
                     /translation="MFDTFKELPQFSDGTYFGYDISEAMIKGAKQQITDPRAPFINSH
                     QATELADYSFVSGTYNMKMDAPD"
BASE COUNT          349 a          329 c          321 g          342 t
ORIGIN      
        1 accagcggca ctgggtgttg gacctgataa tgggagtgcg gcagaaaaat ccggtggtat
       61 cgtctacata gatccacgcc tccgcgatat tggtgcccga gcgatgatgc cagcagaaac
      121 tttaaactcc actttgagcg aacttgggtt caaggcagca gcttttgctg actacgagca
      181 cttacgtctt tccctaggcc tgccggacgg tagccgtgac ctcgaagttg ataaatcgat
      241 cctgcttgaa aatggcttcg aagaactgca cggggtcgat ttccataaag gctgctatat
      301 aggtcaggaa ttaaccgcac gcaccaaaca tcgcggcttg gttaaaaagc gcctcattcc
      361 ggtaaacttt gatggcgatg cccccgtcgc cggcactgag attacgcaag atggtaaaaa
      421 cgccggcgag atacgctcca cagcaggggg gcaaggatta gccctggtcc gcttggactc
      481 actggcaagt tcagtaccgc taatggttgg ggatattccg gtgacaccca acaagccgca
      541 atgggctaat ttctaaatga acaaatcgga tggaccagag acagttggac gaccttctat
      601 tttgcaaccg gtggcgcgca atgacgatcg tgcgttgaaa cattttagcc tcaaacacaa
      661 agctgtcgcc tgacgtgacc gggaacgcca gtaacgccac tttcaaatct ttgttggatt
      721 gctggcctac gacaccgatc tcgatgatgt aaccatcaaa gatctcagct gcgctatggt
      781 gccatgttcg acacctttaa agagctgccg caattctcgg acggcactta tttcggctac
      841 gacattagcg aggccatgat taagggcgcc aaacaacaga tcactgaccc ccgcgcaccg
      901 ttcatcaaca gccatcaggc gacggaattg gcggattatt cgtttgtctc cggaacctac
      961 aatatgaaga tggatgcgcc tgactgacct gttccatcct aatgagttcg ctatttttgt
     1021 ccgggagtaa ttttagctaa tcatcgccag gaatttcggt taattatcaa ctgttgagta
     1081 attcacataa attcacatct tcgttaattc cagactgttg ttaaattata ttaataccac
     1141 aaaatggcta aaatcggcag taacatgttt aattttcgat tgtcgttaaa ttcaaaggta
     1201 ttcacaactt cgttaattta tcaacagtcg attacttatt tatcatcgtc aggagtttct
     1261 gggtcatcgg actgtccggc ttgcagagct ccatcggcac attgaagtgg ttgagcccgg
     1321 tgcattcgag atactctgcc g
//
LOCUS       DASCNL010000389         1329 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000830504, whole genome shotgun sequence.
ACCESSION   DASCNL010000389 DASCNL010000000
VERSION     DASCNL010000389.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1329)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000830504"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="QF359_05325"
     CDS             complement(<1..544)
                     /locus_tag="QF359_05325"
                     /inference="COORDINATES: protein motif:HMM:NF013740.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HJO86361.1"
                     /translation="MTKERQFWIWLAVLVIAISLIVFVSGVLLPFVAGMAVAYFLDPL
                     GDKLESWGLSRTLSTVIITASFFITVIALLILIFPLIQGQIIGFTQKVPSMIENFEAW
                     LAPLKETLSDRIPSEKLQELSDISKSYGTTIVKWLGSLLGGIWKGGLALFNVLSLILI
                     TPVVSFYLLRDWDKIVAKVDS"
     gene            complement(541..1110)
                     /locus_tag="QF359_05330"
     CDS             complement(541..1110)
                     /locus_tag="QF359_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HJO86362.1"
                     /translation="MSKKEDIKLNIPNLISLARLICVPLTVWLILNGEILFAFWVFVS
                     AGISDAVDGFIAKRFNLQTELGAYLDPIADKALLVSVFVTLGQAGYIESWLVLLVVFR
                     DGLILCGAILYHFIHHDLTIEPLLISKVNTTTQFALATLVLGLTGYNIANGEIIESMV
                     YIVAATTVLSGAAYVGIWGMRAATMEPGE"
     gene            complement(1113..>1329)
                     /locus_tag="QF359_05335"
     CDS             complement(1113..>1329)
                     /locus_tag="QF359_05335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86363.1"
                     /translation="ARVAVIENTELVLLSRNEVRLNIHYIGEAEQLKLAMVQADMVLT
                     KDEGNWIVKLQSPVKSGKMKRVKDRRW"
BASE COUNT          412 a          335 c          253 g          329 t
ORIGIN      
        1 agctatcaac tttggcaaca attttgtccc aatctctaag caagtagaaa ctcaccactg
       61 gcgtaatcaa gataagtgaa agtacattaa acagcgccag cccacccttc caaatacctc
      121 ccaacagcga tcccagccac ttgacgattg ttgtgccata agatttcgat atgtcagata
      181 attcctgcag tttttcagac ggaatacggt cagatagagt ctctttaagc ggcgccagcc
      241 aggcttcaaa gttctcgatc atagagggta ctttttgggt aaatccgatg atctgtcctt
      301 gtatgagtgg aaagatcaaa atcaacaagg caataactgt aataaaaaat gacgcagtaa
      361 taataaccgt cgaaagcgtg cgcgacagtc cccacgactc caatttatct cctaatggat
      421 caagaaaata agcaactgcc atcccagcaa caaaaggcag caacacgcca ctgacaaaaa
      481 caattaggga aatagcgata accagaaccg ctaaccaaat ccagaactgc cgttctttcg
      541 tcactcacca ggctccatgg tcgccgcacg cataccccaa atgccgacat acgcggcgcc
      601 tgataatact gtcgttgcag caacaatata aaccatgctc tcaataattt cgccattggc
      661 aatattgtat cctgtcaatc ccaacactag tgtcgccaag gcgaattggg tggtagtatt
      721 tactttactg ataagcaacg gctctatggt gaggtcatgg tggataaaat gatataaaat
      781 agcgccgcaa aggatgaggc catctctaaa caccaccaaa agcactagcc aagactcgat
      841 atatccagct tgacctaaag tcacaaagac acttaccaat aaagctttat cggcaatcgg
      901 gtcgagatag gcacctaatt cggtctgcaa attaaatcgc ttggcgataa agccatccac
      961 cgcatcacta attccggcgg aaacaaatac ccagaacgca aaaagtattt caccattgag
     1021 gatgagccag acggttagcg gcacacagat caatcgcgcc agactgatta agtttggtat
     1081 atttaattta atatcttctt ttttgctcat tttcaccaac ggcgatcttt aactcgcttc
     1141 attttacctg actttacagg cgattgaagt tttacgatcc agtttccctc atcttttgtc
     1201 agtaccatat ctgcctgaac catggctaat tttaattgct ccgcttcgcc gatatagtgg
     1261 atattaagcc gcacctcgtt gcgcgacaat agcaccagtt cggtattttc aataacggca
     1321 acccgggcc
//
LOCUS       DASCNL010000390         4352 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000830700, whole genome shotgun sequence.
ACCESSION   DASCNL010000390 DASCNL010000000
VERSION     DASCNL010000390.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4352)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000830700"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="QF359_05340"
     CDS             <1..858
                     /locus_tag="QF359_05340"
                     /inference="COORDINATES: protein motif:HMM:NF017945.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HJO86364.1"
                     /translation="QPINAFTSAAIVVALLALSWFCYDLLWRLSLSRNTALLLTLSLG
                     LFTAVAWGLTQIFSGRAVFMLLGSTLGSLMMGNVWFRILPALKEMKEARQENRMAEPT
                     LCTLARHRATHNSYLIFPTVVLMLSNHYPVIYSHWLNWIVVSLLLAAFVGGRHMVVSG
                     KAGLWAFYSALILVGITVYLVAAVNPPRESADSGSVSFTTARGIIVMHCLSCHSTVPA
                     DRSYGPAPGKISFDRPEDIKRHARRIKVSTVTIKTMPIKRDSGQDNGMTKAERELLGR
                     WVDAGAKLE"
     gene            868..2583
                     /locus_tag="QF359_05345"
     CDS             868..2583
                     /locus_tag="QF359_05345"
                     /inference="COORDINATES: protein motif:HMM:NF006203.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HJO86365.1"
                     /translation="MAKKTFKVETVGQALLEILRERGIECLIGNAFTSIIDGLSKFEA
                     EGKSTLRPVMTPHEQTAVTMAHGFYAVTGRPQAAIVYSTPGTANIAGALVNASKAQIP
                     LIVLAASSALTDDGSMRGARDIHVQWAQESFDQAGMIREYVKWDYELRQPAQLESVIN
                     RALEMAMDQPRGPVYISLPRDVIAEALTAVTINTPARREVANQRHPDPARLQEAAKIL
                     AESKSPLIITSELGRSALAVAGLVELADAGAIEVIEASPVYANFPANHSCHAGYVFGS
                     AIHPAIAKADALLVIDCDVPWFPARVKIRDKAQVIHLAVDPFFNRYPMHNFRCDVPLA
                     AEPEVTLPLLADAVRKRIKKREVKARHQTLAKRHTAARKKWDKAALAEAKRIPIGFQW
                     ASRCINELLGPNTIVFNEYPLDPRFAPPAGPGTYFGASHAGGLGWGFGAALGAKLGAP
                     GKTVICTLGDGSYIFGVPTACHQVARASNLPLLTIIFNNGTWDEVSNSTRNVHPDGWA
                     VTTDNFPMVGMGPPPKFEEIVRAFDGHGERVEDPAELPAALKRALNVVRKEKRQALVN
                     IICKR"
     gene            2798..3808
                     /locus_tag="QF359_05350"
     CDS             2798..3808
                     /locus_tag="QF359_05350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86366.1"
                     /translation="MNADDVKKLTKDLGADLVGIASAKTLNAFPPDPLWPQTPENILP
                     SCKSVIVVVQHIPVAPFRAKSNIAVQYIDMLALRRMDRIAYKIADHLEREGHPSFVTA
                     AQETDWNMKNASYGYLSTRHLGIEAGLGTLGLEVNILTPEFGPRLYLTGILTELELEA
                     DAPMTEQVCIGESCSRCLHGCPTDAVRHYGIDKRNCAVEAQEFGFMTATAFFMKYCLA
                     SHEEKRELIKSRDVFGFWQGLLRVVGSFGDCPRCLAVCPVGNDYHAYLADFQKVIPEK
                     TPEKVTKAKGFKQARKDGDEISGLDEWNIRWVGPDGYQGIVARQMQEFKKMQKTKAEE
                     TS"
     gene            3810..>4352
                     /locus_tag="QF359_05355"
     CDS             3810..>4352
                     /locus_tag="QF359_05355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86367.1"
                     /translation="MVAVFQSPITADEVKTKAKELGADLAGIADGAVMNANPPYPDDP
                     KTPADISDHDADRVIVLMRRLSLGTSRIQAWDNRHKYYNDELAITALEETALELVLWL
                     EEQGYPALMVPPTHVDPWKYDGNPETHLSPLLLMDHAAVEAGLGTLGLNLQILTPEYG
                     PRVMMIAVLTSAPLEPDTRME"
BASE COUNT          996 a         1238 c         1171 g          947 t
ORIGIN      
        1 caaccgatca acgccttcac cagtgccgcc attgttgttg ctctgctggc cttgtcctgg
       61 ttttgctacg atttgctatg gcggttaagc ctgagccgga atactgccct gctgttgacc
      121 ctttccttag gcctatttac cgccgttgcc tggggcctca cccaaatatt ttccggccgg
      181 gccgtgttta tgctgctggg gtcaacactc ggcagcctga tgatgggcaa cgtctggttc
      241 agaatattgc cggccttgaa agagatgaaa gaagcacgcc aagaaaaccg catggctgaa
      301 cccacgcttt gcacattggc ccggcaccgc gccacccata acagctatct aatatttcca
      361 actgtcgtgc tgatgctcag caaccattac ccagtgatct acagtcactg gctcaactgg
      421 attgttgtat ctcttttgct ggcggcattt gtaggtggac ggcatatggt cgtcagcggc
      481 aaggcgggcc tgtgggcgtt ctactcggct ttgattttgg ttggcattac tgtctatttg
      541 gtcgcggccg tgaacccgcc gcgagagtct gcagactccg gtagcgtttc attcaccacc
      601 gcacgcggta tcatcgttat gcattgtttg agttgtcact caaccgtacc ggcagatcgg
      661 agttacggac cggcacctgg caagatcagc tttgaccgtc cagaagacat taaacgccac
      721 gcccgccgca ttaaagtcag cacggttacg atcaagacca tgccgatcaa gcgcgacagc
      781 ggccaagata acggcatgac caaggccgaa cgggaattgc ttggccgctg ggttgacgcc
      841 ggggccaagc tggaataggc aaatgtaatg gcaaagaaaa cttttaaggt tgaaacggtt
      901 ggtcaggcgc ttctggaaat tctccgggag cgcggtattg agtgccttat cggtaatgcc
      961 tttacctcga tcatcgacgg cttatccaaa ttcgaggctg aaggcaaatc gacgcttcgc
     1021 ccggtcatga cgccccatga acagaccgcg gtgacgatgg cgcatggatt ttatgccgtc
     1081 accggccggc cccaggccgc gattgtttat tccacgcccg gcaccgccaa tatagcaggt
     1141 gcgctggtca atgcatcaaa ggcgcagata ccgctgattg tcctcgctgc cagttcagct
     1201 ttaacggatg acggttctat gcgaggggcc cgcgatattc atgtgcaatg ggcgcaggag
     1261 agcttcgacc aggcgggtat gattcgggaa tatgtcaaat gggattacga actgcgccaa
     1321 cccgctcagc tggaatcggt catcaaccgc gccttggaaa tggcgatgga tcagccgcgc
     1381 ggtccggttt acatctctct gcctcgagat gtcatcgccg aagccttaac cgccgtaacc
     1441 atcaatacgc cagcgcggcg tgaagtcgcc aatcaacgcc accctgatcc ggcccggctc
     1501 caagaagcgg caaaaattct ggccgagtcc aagagcccgc tgattattac ctcagaactt
     1561 ggccgcagcg ccttggctgt tgcgggctta gttgagcttg ccgatgccgg cgccattgaa
     1621 gtgattgaag ccagcccggt ctatgctaac tttccggcca accattcctg tcatgcgggc
     1681 tatgttttcg gctcagccat tcatccggcc atcgccaaag ccgatgcgct tctggtcatc
     1741 gactgtgatg tgccgtggtt tccggcacgg gttaaaatcc gggacaaggc tcaggtgatc
     1801 cacctcgccg tcgacccgtt cttcaaccgc tatccgatgc ataatttccg ctgtgatgtg
     1861 ccgctggctg ccgaacctga ggttaccctg cccctgctcg cagacgcggt gcgaaagcgc
     1921 attaaaaaac gcgaggtcaa agcccgccat cagacgctcg ccaaacggca cacggcagca
     1981 cgcaaaaaat gggataaagc ggccctcgcc gaagccaagc ggataccgat cggctttcaa
     2041 tgggcatccc gctgcatcaa tgaactgctc ggacccaata ctattgtctt caacgaatac
     2101 ccattggacc cgcgctttgc cccgccggcg ggaccgggca cttatttcgg cgcttcgcac
     2161 gccggcggcc tcggttgggg gttcggagca gctttaggtg caaaactcgg tgcacccggc
     2221 aaaactgtca tctgtacctt gggcgacggt tcatatattt ttggcgtacc caccgcctgt
     2281 catcaggtgg cgcgcgccag caatctgccg ctgctgacca tcatcttcaa caatggcact
     2341 tgggatgagg tctcgaacag cacccgcaac gtccatcccg atggctgggc ggtaaccacc
     2401 gataacttcc cgatggtggg catgggcccg ccgccgaaat tcgaggagat cgtacgggct
     2461 tttgacggcc acggcgagag ggttgaagac ccagcggaac tgcccgccgc cctcaagcgc
     2521 gccctcaacg tcgtgcgcaa agaaaaacgc caagcgctgg ttaatattat ttgtaaacgc
     2581 tagcgggagc ttattcttcc ggcaatccgg ttttgcggtt tgcgccaaca cattttagct
     2641 cttcatgtgc cgaaaaacat tatcggccgg gatagtttcg tatataccgt caataagaaa
     2701 tttggatcac cgcctaatat ctgcgaattg tataaaaacc tgctttccat acccctgtct
     2761 aaaaagttag gctacccaac aatagggagc cgaatgaatg aatgcagacg acgtcaaaaa
     2821 attaaccaaa gacctcggcg cagatttggt tggcatcgcc tcggccaaga ctctcaacgc
     2881 cttcccgccc gatccgctct ggccacaaac gccggaaaat attctgccga gttgcaaaag
     2941 cgtcatcgtc gttgtccaac atatcccggt cgcgccattc cgcgccaaat ctaatatagc
     3001 agtgcaatat atcgacatgc tggcgctgcg ccggatggac cgcatcgctt ataaaattgc
     3061 cgatcatttg gagcgagaag gccatccaag tttcgtcact gccgcccagg aaaccgattg
     3121 gaatatgaaa aacgctagct acggttatct atcgacccgg catttaggaa ttgaagccgg
     3181 gctcggtacc ttaggcttgg aggtcaatat tctgaccccg gaatttggcc caaggcttta
     3241 tcttaccggt attctgaccg agctcgaact ggaagcggac gcgccgatga ccgagcaggt
     3301 ctgcatcggt gaaagctgtt cccgttgcct ccatggctgc ccgaccgacg cagtgcgcca
     3361 ttacggcatc gataaacgca attgcgccgt cgaagcccaa gagttcggct tcatgacggc
     3421 aactgccttt ttcatgaaat actgcctggc gagccatgaa gaaaaacggg agctgattaa
     3481 atcccgagat gtcttcggct tctggcaggg cttgctacgc gtcgttggct ctttcggtga
     3541 ttgcccgcgc tgtttggcgg tctgcccggt cggcaatgac tatcacgcct atttggctga
     3601 tttccaaaaa gtcatcccgg aaaaaacccc agaaaaagtc accaaggcca aaggttttaa
     3661 gcaggcgcgc aaggacggcg atgagatcag cggcctggat gagtggaaca tccgctgggt
     3721 cggcccggac ggctatcagg gtatcgtcgc ccgccagatg caggaattca agaaaatgca
     3781 aaaaaccaaa gcagaggaaa cgagctaaca tggttgcagt ctttcaatcg ccgatcacgg
     3841 ccgacgaagt aaaaaccaaa gccaaagagc ttggcgcaga tttagccggc attgccgatg
     3901 gtgcggtaat gaacgccaac ccgccctacc cggatgatcc gaaaactccg gccgatatca
     3961 gcgaccatga tgctgaccgg gtgattgtcc tgatgcgccg tctaagtctc ggcaccagcc
     4021 gcattcaagc ctgggacaac cgccacaaat attacaatga tgagcttgct attacggcgc
     4081 tggaagaaac tgcgttggag ctggtgctgt ggctggaaga acaaggttac ccggcgctga
     4141 tggtgccgcc gacccatgtt gatccgtgga aatatgacgg caacccggaa acccacctat
     4201 caccgttgtt gttgatggat cacgccgcgg tcgaggctgg actcggcacg ctgggcttaa
     4261 atttacaaat cctgacgccg gaatatggtc cccgggtgat gatgatcgcg gtcttgacgt
     4321 ctgcacccct tgagccggat acacgcatgg aa
//
LOCUS       DASCNL010000391         1698 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000833121, whole genome shotgun sequence.
ACCESSION   DASCNL010000391 DASCNL010000000
VERSION     DASCNL010000391.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000833121"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(56..310)
                     /locus_tag="QF359_05360"
     CDS             complement(56..310)
                     /locus_tag="QF359_05360"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJO86368.1"
                     /translation="MSNKAKNILFIMCDQLRYDYLGCTGHPSIQTPNIDALAAKGVIF
                     NRSYAQASICGPSRASFYTGRYTCFATVPIGTSTLCESTN"
     gene            473..781
                     /locus_tag="QF359_05365"
     CDS             473..781
                     /locus_tag="QF359_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86369.1"
                     /translation="MMLIQLGLEPEQYDCFRSICQRAAKILRQHELGFDESNEGQIAD
                     LDKLVGLPEYNILPPEFEQALVAIGIVWNNADINWSMDERIVNTAVSDSMGRFFFKKM
                     "
     gene            complement(797..>1698)
                     /locus_tag="QF359_05370"
     CDS             complement(797..>1698)
                     /locus_tag="QF359_05370"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86370.1"
                     /translation="LIEMFYFIALAQMWNLLAGYGGLVSIGQQAFLGLGGYSLFVLTT
                     HLGLGAVWSIPVAGFVGAAISLPVAFLVFRLRGHYFAIGTWVIAEIFLLGFAQITALG
                     GGSGMSLPVSVVKSIASTRSGRDTAVYWVALAVVAAVITIVYLLLRSRHGLALTAIRD
                     SERASSSLGVDNFKAKLLVYIFAAFGTAAIGALIFLTKLRISPSAAFDINWTTTVIFI
                     VVIGGIGTIEGPILGTIVFFLLRESLADYGSWYLILLGATAVLVMLRAPQGLWGLIIL
                     KYDLHFFPVQQRLHLQTELPKDE"
BASE COUNT          504 a          412 c          405 g          377 t
ORIGIN      
        1 gtcttgccga ccaacgcgac cctcattccc aagggccgga ggatgtctcc catggtcagt
       61 tcgtcgactc gcagagggta gaggttccaa ttggcaccgt ggcaaaacat gtataacgtc
      121 ctgtatagaa ggatgcgcgc gatgggccac atatagacgc ctgggcatag gatcggttaa
      181 atatcacacc cttcgcagcc aaggcgtcga tgtttggggt ttggatgctt ggatggcccg
      241 tacaacccaa atagtcataa cgaagttggt cgcacataat aaataaaata tttttggcct
      301 tattggacat gccccagatt tccaattatc acagttgact gcgcaaatat tattttttca
      361 gatgaatgtc gagaacacat aagcaagtcg ccaccaggtg gaattttaat gaaataaaat
      421 tgtcgccctt agacagttga tgcatcgttc agcaaaaact acagaaagaa agatgatgct
      481 gatacaatta ggtttagaac cagaacagta tgactgtttt cgcagcatat gccaacgcgc
      541 cgctaagatt ctgcgccagc atgaactcgg ttttgatgaa tccaatgagg ggcagatagc
      601 cgatttagac aaactggttg gccttcccga gtacaacatt cttccccctg aatttgaaca
      661 agccttggtg gcgatcggaa tcgtttggaa caatgcagat atcaattggt cgatggacga
      721 gcgtatcgtg aatacggcgg ttagtgactc catggggcgg ttctttttta aaaaaatgta
      781 aaggggtgat ggatagttat tcgtctttcg ggagctctgt ttgaagatgc agccgctgct
      841 gaacggggaa aaaatgaaga tcatatttca aaattattag cccccataaa ccctgcggcg
      901 cccgcagcat taccaacaca gccgttgccc ccaatagaat aagataccag gacccatagt
      961 ccgccagtga ttctcgcaat aaaaaaaaca caatggtacc caggattggc ccttcgatag
     1021 ttccgatacc cccgatcacg acaatgaata tcaccgtcgt tgtccaatta atgtcgaagg
     1081 ccgcactggg gctgatccga agtttggtga gaaaaatgag cgccccgatg gcggcggtgc
     1141 cgaaagctgc aaaaatatag accaatagtt tggctttaaa attatcaacg cccaaacttg
     1201 atgacgctct ttcggaatct ctgattgctg tcaacgcaag accatggcgc gatcgtagaa
     1261 gtaagtaaac aatcgtgatg acggcagcga cgacggcaag ggccacccaa tagacggcgg
     1321 tgtctcgacc agaccgagtt gaggctatcg atttgaccac tgaaaccggc aagctcatgc
     1381 ctgaccctcc ccctaaggcc gtgatttggg cgaacccgag aaggaatatt tccgcgatca
     1441 cccaagttcc gatagcgaaa taatgacccc gcaaacgaaa aaccaagaag gcgaccggta
     1501 aggaaatggc agcacctacg aatccagcga ctggtatgga ccataccgct cccagaccca
     1561 aatgcgttgt taagacaaat aaggaatagc cgcccaaacc taaaaacgcc tgctggccaa
     1621 tggataccaa tccaccgtaa ccggccagta aattccacat ttgcgccaag gcgataaaat
     1681 agaacatttc gatcagca
//
LOCUS       DASCNL010000392         1011 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000833124, whole genome shotgun sequence.
ACCESSION   DASCNL010000392 DASCNL010000000
VERSION     DASCNL010000392.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1011)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1011)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000833124"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            88..573
                     /locus_tag="QF359_05375"
     CDS             88..573
                     /locus_tag="QF359_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86371.1"
                     /translation="MQQYRESLHSGETGLLEIIQKENLTLACDQMTVFARWVTPKFFS
                     KRFDTFFFLARAPQGQLASHDNIESTGSLWTTPAGAVADGDAGRKVVVFATRTNLLKL
                     ALFNSVDSLFENTLKEEIVIVEPFITDNDGDVTFRIRDDAGYPLIEYTEYAGSVLKVK
                     E"
BASE COUNT          262 a          216 c          254 g          279 t
ORIGIN      
        1 cgggaaacct tttaagaggc aggtgttctg ctggctcgcg acaatgaatc cggagacatc
       61 ttaagtggcg agcgttgtgc ggtattagtg cagcaatatc gggaatcgct tcatagtggt
      121 gaaaccggtc ttttggagat tatccaaaaa gaaaatctta ccctggcctg tgatcaaatg
      181 accgtgtttg ctcgctgggt gaccccgaaa ttcttttcca aacgtttcga cacttttttc
      241 tttttagccc gagcgcccca gggtcaactg gccagccatg ataatatcga gtctacaggt
      301 tcgctgtgga cgaccccggc gggtgcggtt gcggatggcg atgccggacg caaagtagtg
      361 gtcttcgcca cccggacaaa tctacttaag cttgcgctgt ttaacagtgt tgatagtctc
      421 tttgaaaata ctttaaagga agagatagtc atcgttgaac cgttcattac ggataatgat
      481 ggcgatgtta cctttcgcat cagagacgat gccggctatc cgctgatcga atacactgaa
      541 tatgctggct cggtcttgaa ggttaaggaa taggctgaga gtgcctaaaa ctttgccaaa
      601 tatttggtga gtttaattaa atttgattcg tttcacctaa ataaaagaat aacggccgcg
      661 gaacctactc cgcagccgtg gttttagcgc ccggacgggg tagtcgcgtc cgtgcttggt
      721 gatcagtttc tgaaggttta attcgaccgt gtgggcgcag tgattgcaga tcgccagcaa
      781 gcgagaatta aatttagcgg cgttcccaag agatgctggg gtggtcatgg tttgattatc
      841 ttgtgagttg gttcgcgaaa tatcctgtac ctaaaataaa tccgtgacaa taggtgcgcc
      901 tattgataca cactcgccac gacacgccga aatatctgta cctatactgc acctaatcgg
      961 taaattacat tcaataagtt ttaataaaca ggataactta ttgaaaacat t
//
LOCUS       DASCNL010000393         1298 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000833134, whole genome shotgun sequence.
ACCESSION   DASCNL010000393 DASCNL010000000
VERSION     DASCNL010000393.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000833134"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1298)
                     /locus_tag="QF359_05380"
     CDS             complement(<1..>1298)
                     /locus_tag="QF359_05380"
                     /inference="COORDINATES: protein motif:HMM:NF006052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HJO86372.1"
                     /translation="VMPDATQKSGGQYLVDHLIVNGIDRIFSVPGESFLGAMDAFYGR
                     SNEIQFVNCRQEGGAAFMAAAYGRMTGKPGICFVTRGPGATNASIGVHVAKQDSVPMI
                     LFVGQVSVSSTHRDAFQEINIPAMFKPLAKWVVQIDEAKRLPELLARAFKVATSGRPG
                     PVVISLPEDVQRDLIKTLPAVENQPTAPSPSSAQMYQLGVLISQAKQPVIVLGASTWT
                     AEACDQIADFTERHNIPVVASFRCQDKIDNDHPNYVGVLGVGTPPFISELVDGADLLI
                     MLSVELSEIVTESFTKFSHPKMQQQLVHVHPDEEELGRIYQPDLAIHSGMTEFAAQLA
                     DKTFKSKAKHSVDVAGLRQKFEDFTIPSTCPGDVHIGEILTWLDQRLPKDTVISCGAG
                     NYTHWVLRFLKHRQFGTQLAPLGAVMGYGVPAAIAASLQYP"
BASE COUNT          334 a          349 c          315 g          300 t
ORIGIN      
        1 ggatattgca gcgaggcggc aatcgccgcc ggtacgccat agcccatcac cgcacccaaa
       61 ggagccagct gagtgccaaa ctggcgatgt tttaggaatc gcaaaaccca atgggtatag
      121 ttaccagcgc cgcacgatat aaccgtatcc ttcggcagtc gttgatccag ccacgtcagt
      181 atttcaccaa tatggacatc accaggacag gtcgatggta tagtgaaatc ttcaaatttt
      241 tggcgcaaac cggctacatc caccgaatgc tttgccttag atttaaatgt tttgtctgca
      301 agctgcgcag caaattctgt catgccggaa tgaatagcca gatcgggctg ataaatccgg
      361 ccaagttctt cttcatctgg atgcacatgg accaattgct gctgcatttt gggatgagag
      421 aacttggtga agctttcggt aacgatctca ctgagctcga cactgagcat aatcagcaga
      481 tcagctccat caaccagttc agatataaag ggtggtgtac cgacacctaa cacaccaaca
      541 taattaggat gatcgttatc aattttatcc tggcacctga aactggcgac tacgggaata
      601 ttgtggcgct cagtaaaatc ggcgatttgg tcacaggctt ccgccgtcca ggtcgacgcg
      661 cccaatacaa taaccggctg cttggcttga gatatcagca cacccaattg atacatttgc
      721 gccgatgacg ggcttggtgc ggtgggttga ttttccacag ccggtagcgt cttaatcaga
      781 tcccgctgca catcttccgg caaactaata acgaccgggc ccggccggcc agaggttgcc
      841 actttaaaag cccgcgccag taattcaggt aggcgtttgg cttcatcaat ttgcacgacc
      901 catttcgcca ggggcttgaa catcgccgga atgttaattt cctgaaacgc atcccgatga
      961 gttgaagaaa ctgatacttg tccgacaaac aaaatcatcg gcacagaatc ttgtttggca
     1021 acatggacac cgatactggc attggttgca cccggtccgc gcgtgacaaa gcaaatgccg
     1081 ggcttgccag tcatacgacc ataggcagcc gccataaacg ccgcgccacc ttcttggcgg
     1141 caattgacga actgaatttc attgctgcgc ccatagaacg catccatcgc gcccaggaag
     1201 ctctcccccg gtacggagaa tatccggtca atgccgttga cgatcaaatg atcgacgagg
     1261 tactgacccc cggatttttg tgttgcatca ggcatgac
//
LOCUS       DASCNL010000394         2282 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000833727, whole genome shotgun sequence.
ACCESSION   DASCNL010000394 DASCNL010000000
VERSION     DASCNL010000394.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000833727"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            618..>2282
                     /locus_tag="QF359_05385"
     CDS             618..>2282
                     /locus_tag="QF359_05385"
                     /inference="COORDINATES: protein motif:HMM:NF025214.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJO86373.1"
                     /translation="MNRNERRKLSKQQRRQAAAGGQIAIDTSSLLATAQQQLDQGSAQ
                     EAEITCQKILSINPGEPEALQLLGLIAYFGGDLKNATAWLKKAIKVRPNFAAAYYNLG
                     IVLNRAGQAKQAETAYRQAVKIEPENIDFQNNLGNLLVNRKAGEEALKFFHQALAIKP
                     NHLKILNNYGSALSSLGRHDEAIAQFKKAITIEPNYGDAYNNLGNAYMERGQLSAAIE
                     EFEKAIERQPDNARMFNNLGNALLDSGEPEKARNAYQKSVELAPGQPRTHSNLLYCLQ
                     YDPGVTVGQLNEHHLTWDQVHGASHKAHWPAHKISKKPGRRLRLGFASPDFGRHPVGF
                     FLIKLLENIAAKDFNIYGYSDRFNKDDITSRLAAATSQWRDSFNLTDDELAAKIRADK
                     IDILFELSGHTKGNRLSMHAQKPAPVQISWGIGYPGTTGLSAIDILLTDTYHVDPAED
                     VLYPENIVRLPDRISCYAPPSYAPGAGGLPARQNGYVTFGSFNQSRKITAAVLATWAS
                     ILAVVPDSRLLLKYSGLDDEINVTRIARAFADKGIDPDRIMIEGGAT"
BASE COUNT          605 a          584 c          518 g          575 t
ORIGIN      
        1 cttctgtatg aaattttggg gtccagtgac ccatgctgtt ttttccgata aagtctatct
       61 tctcacttaa ccttactcgc ataaaagggt caacgaattt agctccaagc gaatatacta
      121 gttttttcat atattttggg aaattatcat tgtcgtaatt taataaatat gaggtagaat
      181 atattacttt gatgcctcta gcctcagcaa aatcttaaat tttacgtata tattattcag
      241 acaaatcaag gcctttctgc catcgtttca aatctcgatg ttgctgtgtc gtaacgtcgt
      301 ggatggtatt cttgtcagga aaaaatcacc tatatgcaaa ccagagatgt tttgccaaat
      361 cactatttct ttttaagaat cgttttattt tagaaccact atcacttatc gcgttaaaaa
      421 ttcctttttc ggaagcaacc gtatcacctg gatcgttagg cgttgccatg acgatactac
      481 ctattgccgt tcaccgggtt tcgtcaaccc gcaaattcgc cttgttgtga agaggatata
      541 gcgttaccta ccgtttgccg ttatcctgct ttttacaatc gccgcactgg ggtcacgcat
      601 aggattaatt tttgggcatg aatagaaatg aacgccgtaa actatcaaaa cagcaacggc
      661 gccaggcggc ggcgggtggt cagatcgcca ttgatacatc aagcttgctg gcaaccgcac
      721 aacaacagct cgatcagggc tcggcccaag aggccgagat aacatgtcaa aaaattctat
      781 cgattaaccc cggcgagccc gaagcactcc aattgcttgg gcttatcgcc tattttggtg
      841 gtgaccttaa aaacgcgacc gcatggttaa aaaaagccat caaagtgcgc ccgaatttcg
      901 ccgcggcata ttataatctc ggcattgtct tgaaccgggc tggccaagcc aaacaagccg
      961 agacagctta tcgccaggca gtcaaaattg agcctgaaaa tatcgatttt caaaataatc
     1021 tgggtaatct gctggttaac cgcaaagcgg gcgaagaagc cctcaaattt ttccaccaag
     1081 cactcgcgat caagcccaat cacctaaaaa ttctaaacaa ttatggctcc gccctgtcga
     1141 gcttgggccg ccatgacgaa gccatcgccc aatttaaaaa ggcaattacg atcgagccca
     1201 attacggcga cgcctataac aatttgggca acgcctatat ggagagaggc cagctgtcgg
     1261 cggccattga agagttcgaa aaagccatcg agcggcaacc tgacaatgcc cgcatgttca
     1321 ataatttagg caatgcgcta ctggattccg gtgaaccgga aaaagcccgg aacgcctatc
     1381 aaaaatccgt cgaactggcg cccggtcagc cccgcaccca ttctaattta ctctattgcc
     1441 tccaatatga tccgggtgta acagtcggcc agctcaatga gcaccacctg acctgggacc
     1501 aggtccacgg agcatcccat aaggcgcatt ggccagccca taaaatcagc aaaaagcccg
     1561 gccggcggct acggctcggt tttgcctcac cagattttgg ccgtcatccc gtcggctttt
     1621 ttctgattaa attgctggaa aatatcgccg ccaaggattt taatatttat ggctattccg
     1681 accggtttaa caaagatgat ataacctccc ggctggctgc cgcgacgtcc caatggcggg
     1741 atagctttaa tttaaccgat gacgaactcg cggcgaaaat acgtgccgac aaaattgata
     1801 ttttgtttga attatcgggc cacaccaaag gcaatcgtct atcgatgcac gcccaaaagc
     1861 cggccccggt gcaaataagc tggggcatcg gctacccagg caccaccgga ttgtcggcaa
     1921 ttgatatttt gttgacggat acttatcacg ttgatccggc ggaggatgtt ctctacccgg
     1981 aaaacatcgt ccggttgccg gacagaattt cctgttatgc gccgccgagt tatgcgccgg
     2041 gggctggcgg cttgccggcc cgccaaaacg gctatgtcac ttttggctca tttaaccaat
     2101 cccggaaaat caccgccgcg gttctggcca cctgggcaag tatattggcc gtcgttcctg
     2161 actcccggtt actgcttaaa tatagcgggt tggatgatga aattaacgtc acgcggattg
     2221 cccgcgcttt tgctgacaag ggaatcgatc cggaccggat aatgatcgaa ggcggcgcga
     2281 cc
//
LOCUS       DASCNL010000395         6220 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000834595, whole genome shotgun sequence.
ACCESSION   DASCNL010000395 DASCNL010000000
VERSION     DASCNL010000395.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6220)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6220)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6220
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000834595"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(196..852)
                     /locus_tag="QF359_05390"
     CDS             complement(196..852)
                     /locus_tag="QF359_05390"
                     /inference="COORDINATES: protein motif:HMM:NF013250.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HJO86374.1"
                     /translation="MTTENSDQHEQQPKSILSYVWDLPNICSLAGLGCTLLAIYFIIL
                     GIYSAAMIGMIWAVAFDWADGLVARRMKGRTGSDRLFGGQLDVLIDIVSYGITPAILL
                     LSYGKYEPIFLPGAFLMLAAGAIRLSYFSTFGLADGTKYTGLAIDNNNIAIVFIFLFE
                     GLFSSGTFSVILYVSGLGLAALNVSQIKTPKLSGNPVNVVLLACYTLGITVINGWKLL
                     "
     gene            1030..1461
                     /locus_tag="QF359_05395"
     CDS             1030..1461
                     /locus_tag="QF359_05395"
                     /inference="COORDINATES: protein motif:HMM:NF013621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HJO86375.1"
                     /translation="MIVYTVGTFDLLHVGHLALLNHCKSLGDIVAVGVASDEVVNLYK
                     PYVPVIPLNQRIEMLEALQCVDIVRPYHELEYVSGCKKLNVDIFVIGEDWGRKQHNLD
                     VESYLETEGKKIIQVSYNPRTSSTEIKQTVIAQTDRDFQAA"
     gene            1540..1734
                     /locus_tag="QF359_05400"
     CDS             1540..1734
                     /locus_tag="QF359_05400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86376.1"
                     /translation="MNTTDIKENADPKEIASYLIQEHGVDGAIQEAMEGVAAANKIGG
                     FYSLSVWREIRTLLRAKLQE"
     gene            1903..2769
                     /locus_tag="QF359_05405"
     CDS             1903..2769
                     /locus_tag="QF359_05405"
                     /inference="COORDINATES: protein motif:HMM:NF013117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HJO86377.1"
                     /translation="MEPTSNGLGQRLEPIIQEIANILTIYGMDVLGAFAILVIGLWFS
                     GRAGRLIRRTLEKSGRVDATVSKFFSNFAKYLVLVVTVVAALNQFGVQTTSLLAVLGA
                     AGLAIGLALQGTLSNVAAGVMLLICRPFKVGDYVDAGGHSGTVKQLAMFFTELATSDN
                     IRIIVPNAQIWGNSIQNFSTNDTRRVVIVVGISYDDDIEKAIEYIRSVINDDSRILFD
                     PAPYVAFFELADSSVNLVARVWVENSDYSSVKSDLGKGIKQTFDENGITIPFPTKTVI
                     SQTPFPSKTDLS"
     gene            complement(2972..3307)
                     /locus_tag="QF359_05410"
     CDS             complement(2972..3307)
                     /locus_tag="QF359_05410"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HJO86378.1"
                     /translation="MYETWKDLPGPDRLGSRTFLFFVDDKLAGWNSNGDARMVLANLG
                     QPTTAKKHQSSEKSKPTSKVSTGTGFFVNGNGYLVTNNHVIETCDSIYVKEYGKELSV
                     KNRCLIQQR"
     gene            complement(3706..4590)
                     /locus_tag="QF359_05415"
     CDS             complement(3706..4590)
                     /locus_tag="QF359_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HJO86379.1"
                     /translation="MDWDKLRIFHAVAEAGSFTHAGETLNLSQSAISRQISALEQSIN
                     VPLFHRHARGLKLTEQGEDLYLTAHDVFHKVAMTVARLTESKEQAEGPLKITTTVGFG
                     SVWLTPRIKEFMDLYPEIDVTITLDYDDHNLAMREADVAIRLTPPRQSDLVQRHLMNI
                     HYKVYASPEYIQEHGMPKTPEELDNHNLVTFGDEVGDQTDLLPALNFLQGAGAKGKRR
                     KPVLQVNNIYGIYRAVRSGVGIGALPDYFIEGSVNLVHILPELQSPQTEVYFVYPEEL
                     RQSARIAVFRDFLVRKIL"
     gene            complement(4693..5664)
                     /gene="trxB"
                     /locus_tag="QF359_05420"
     CDS             complement(4693..5664)
                     /gene="trxB"
                     /locus_tag="QF359_05420"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HJO86380.1"
                     /translation="MSSQHHKVLILGSGAAGLTAAIYAARAGLEPTLIHGMQPGGQMT
                     ITTDVENFPGFPEVVQGPWLMEQMQAQAEGVGTTMISDMIVEADLQTRPFKLTGDSGD
                     IFTCNVLIVCTGAQAKWLGIESEQKYQGYGVSACATCDGFFYRGKEVAVVGGGNTAVE
                     EAIYLTNHATKVKLIHRRDELRAEKLLQQRLLSNPKIEILWDSTLEEVLGKQDGPMPE
                     VTGMKVNNVKTDEITEHSLEGVFIAIGHKPNTDLFTGQLDMDEEGYLITLPDSTATKI
                     PGVFAAGDVQDNKFRQAVTAAGTGCMAALEAEKYLIEVEATEQAAAE"
     gene            5919..>6220
                     /locus_tag="QF359_05425"
     CDS             5919..>6220
                     /locus_tag="QF359_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HJO86381.1"
                     /translation="MSRVKLDNIDRKILHELRDNGRITNVELAKRVGISAPPCLRRVR
                     ALEEAGLIRGYHADLEPTELGYNVTVFAQVGLSSQAEPDLVAFESLIDSWVEVREC"
BASE COUNT         1582 a         1506 c         1529 g         1603 t
ORIGIN      
        1 agatggctgc gttccacaaa taaaccagga tcaaagaagt aacaatcgcc agcactatga
       61 cccaaaaaac tgtcagaaag tcatatggca tcggcatgta ggtaaccgtt tcataaatat
      121 agaacggcag tatttccagg cagccggcca tggtgacgac gaacatcata atcgtgaggc
      181 ctaagctctt actatctaca gaagtttcca gccattgatt accgttatcc caagagtata
      241 gcatgcaaga agcacaacat taacggggtt tccagaaagc ttgggtgttt ttatttgtga
      301 cacgttcaag gcagcgagtc ccaatccgct gacatagaga attacagaaa atgttcccga
      361 actaaacagg ccctcaaaca gaaatataaa aacgattgct atgttgttgt tatcgatagc
      421 cagtccggtg tatttggttc cgtcagcaag gccaaaagta ctaaaataac tcaaccgtat
      481 tgctccggct gcaagcatta aaaatgcacc cggtaggaat ataggctcgt attttccata
      541 acttaataga agtattgcag gcgtgatgcc atagctgaca atatctatca acacatccag
      601 ctgaccgcca aacaatcggt ctgagccagt tcgccccttc atccggcggg caacgagacc
      661 atcggcccag tcaaaagcga cggcccagat cattcctatc attgctgcag agtagatgcc
      721 taaaatgatg aaatatatag caagaagggt acaaccaaga ccggcaagag aacaaatatt
      781 gggaagatcc cagacgtaag aaagaataga tttgggctgt tgctcatgct gatcagagtt
      841 ttcggttgtc atgctgggtc ctacaaatga cggggtttca attttgatag atttcgacta
      901 taactcgtgc ttagcaaaga aggtggttgg ctggataaat atccaccctc tgtgcagctc
      961 tctggtccga tcataatcgt accgtttgac tataccataa tcgaacaaac ctaaaggtct
     1021 aaaccaataa tgattgtcta taccgtaggc acttttgatc tattgcatgt ggggcattta
     1081 gctctgctaa accattgtaa gtctttgggt gatattgttg cggttggcgt agcttctgat
     1141 gaggtcgtca acctttataa gccctatgta cctgttattc cgcttaatca acgtatagaa
     1201 atgctggaag ctttgcagtg cgtcgatatt gtgcgcccgt accatgagct tgaatatgta
     1261 tcaggttgta agaaattgaa tgtcgatatt ttcgtgatcg gagaagattg gggccgcaaa
     1321 cagcacaatc ttgacgtgga atcctattta gagacagaag gtaagaaaat tattcaagtt
     1381 agctataatc cccgaacttc atcgacagaa attaagcaaa cagtcattgc tcagactgac
     1441 agagactttc aagctgcata gcttggagat tgacctcagg ttacctagat aatattaatt
     1501 cggtgttctt gcgggcagta ttcgagtata ccaacgctca tgaatacaac tgatataaaa
     1561 gaaaacgctg atcccaaaga aatagccagt tatcttatcc aggaacatgg agttgatggc
     1621 gcaattcaag aagcgatgga aggtgttgcc gcggccaata aaattggtgg cttctattcc
     1681 cttagcgttt ggcgtgaaat tcgcacattg ttgagggcta aattacaaga atagccgcaa
     1741 agaaaatcgc ctgacggagg aacatggtcg atcaatccaa cccgcaacgt cttgcggaga
     1801 tgcttgttga ccaagtggtt ggctttactc tgcttatgga gcagaacact gaaggggtag
     1861 gttcgccgcg aagtcggccc accaataggg aataggcagg acatggaacc gacatcaaac
     1921 ggtttgggcc agcggctcga gcccatcatt caagagatcg ctaacattct gacgatctat
     1981 ggcatggacg tgctcggggc gttcgccatc cttgtcatag gtttgtggtt ctccggccgc
     2041 gctgggcgcc tgatccggcg cacactggag aagagcggcc gcgttgatgc tacagtgtct
     2101 aaatttttct caaattttgc taaatatctg gttctagtgg tgacggtggt cgccgcgctt
     2161 aatcaatttg gcgtccagac gacaagcctg cttgccgtcc tcggcgccgc tggcctggct
     2221 attggcctcg cgttgcaggg gaccctcagc aacgtcgccg ccggggtgat gcttctgatc
     2281 tgccgcccgt tcaaggtcgg cgattacgtc gatgccggcg ggcattcagg taccgtaaaa
     2341 cagttggcga tgttcttcac tgaattggcg acctcagata acattcgcat cattgtcccc
     2401 aatgcccaaa tctggggaaa ctccatacaa aatttctcga ccaatgatac ccgccgggta
     2461 gttatcgtcg ttggaatttc ctacgatgac gacatcgaga aggctataga atacatacgt
     2521 agcgtcatca atgacgacag ccgaatttta ttcgacccgg cgccctatgt cgcctttttt
     2581 gaacttgcgg acagctcggt caatttggtt gctcgggtgt gggtcgaaaa ttctgattac
     2641 tcgtcggtaa agtccgacct tggcaaagga atcaagcaaa cctttgacga aaatggtatc
     2701 accattcctt ttccgacgaa aaccgttatc tctcaaacac cgtttccttc aaagactgat
     2761 ttatcctagc ggcctgattt gccgccttga aatttattaa actgcattcg gcaatcgtct
     2821 cttcgccgcg aagaccgtct aaaacaatac ggatcttctc ttcggctgaa tactgcttgc
     2881 gggtggctcg gcggatgtct ttgaccgtct tctcggacga agaaccccgg gttctcatat
     2941 tctggctcat cttggtttga tattaagccg cttagcgttg ctgtatcaag cagcggtttt
     3001 tgacggataa ttcttttccg tactctttta cgtagatact atcacaagtt tcaatcacat
     3061 gattgtttgt aacgaggtaa ccatttccgt ttacaaagaa acccgtcccg gttgaaacct
     3121 tagaagtcgg tttagacttc tcagaagatt gatgcttttt tgccgtggtc ggctgaccca
     3181 gatttgcaag aaccatcctt gcatcaccat tcgagttcca acccgcaagt ttatcatcaa
     3241 caaagaacag aaaagttctg ctgccaagcc tatcaggtcc cggcaaatcc ttccaagttt
     3301 catacatcca tgtttcaaca tgatgacctc gaaactgggt gttccgaccc ggctgtgaaa
     3361 gatcattaaa ttgctagttt tttgcaaata gtccgcagaa atctgcttaa atgggcaccc
     3421 agtgagcacc cagccttacg acaaaaacca gttaccccaa aaaaagctag gaaactggag
     3481 tttcctagca agtttaacag ggaggcttca cgtctgggag acgtagggtc cgaagaccct
     3541 tccttctagg gccttgcgcc ccggaagtcg cgccgaactt gtcgtcgcgt gattagatat
     3601 atagatactt ttatgtttga aaaccagcgc tgaaacgtca aatcacccat gcgcaaaatg
     3661 cataggttta tataagccat tgatgctaag gcattatttt cggttttaga gaatttttct
     3721 gaccaaaaaa tctctaaata cggcaatcct tgccgactgt ctgagctctt ccggatagac
     3781 gaaataaacc tcggtttggg gtgattgcag ctcgggcagg atatgcacta aattgaccga
     3841 tccctcgata aaatagtccg gtaaggcgcc gatgcccacg ccggagcgca cagcccggta
     3901 aatgccgtaa atattgttca cctgaagaac cggcttgcgg cgtttgcctt tggcgccggc
     3961 accttgcaga aaattaagcg ccggcagcaa atcggtttgg tcaccgactt cgtccccaaa
     4021 ggtcacgaga ttatgattgt ccagttcctc cggcgttttc ggcatgccgt gttcctgtat
     4081 atattccggc gaagcgtaaa ctttgtaatg gatgttcatc aaatggcgct gcacgagatc
     4141 ggactgacgc ggtggagtca ggcgaatggc gacatcggct tcgcgcatcg ccagattgtg
     4201 atcgtcatag tccagcgtta tggtgacatc aatttctgga tagagatcca tgaattcttt
     4261 gatgcggggc gttagccaga ccgagccaaa gccgacagtc gtggtgattt ttaacggccc
     4321 ttccgcctgc tccttgcttt cggtcagccg cgctacggtc attgcgactt tgtggaatac
     4381 gtcgtgggcg gtcagataga gatcttctcc ctgttccgtg agtttcaggc cacgggcatg
     4441 acgatggaac agcggtacat tgatgctctg ttcaagcgca gaaatttgcc ggctgatggc
     4501 cgattggctg aggttcagag tttcgccggc atgagtgaaa ctgcccgcct cggcgacagc
     4561 gtgaaatatg cgaagcttat cccaatccat tttatatctt atctagcaaa tacatataca
     4621 aaatcgatgg gactaaccca ccaagttatg cattttacgc aatattgatc gggattaata
     4681 cagaaagttt gtttactcgg ctgccgcttg ttcggtggct tcaacttcga tgaggtattt
     4741 ttcagcttca agcgccgcca tgcagccggt gccggcagcc gtcacggctt ggcggaattt
     4801 attatcctgc acatcaccag cggcaaaaac acccggtatt ttggttgccg tgctgtcagg
     4861 tagggtgatc agatagcctt cttcatccat atccaactga ccggtaaaca aatccgtatt
     4921 gggtttgtgg ccgatggcga taaagacgcc ttcaagacta tgttcggtaa tctcatccgt
     4981 tttgacgtta ttgactttca tgccggtgac ctcgggcatc gggccatcct gtttgccgag
     5041 cacttcttcc aacgtcgagt cccacagtat ttcaattttg gggttgctga gcaggcgctg
     5101 ctgcagaagt ttctcggcac gcagttcgtc gcggcggtgg atcagcttta ctttagtcgc
     5161 gtgattggtg agataaatcg cttcctcaac tgccgtattg ccgccgccga ccacggcgac
     5221 ttccttaccg cggtaaaaaa agccgtcgca agttgcacag gccgaaacgc catagccttg
     5281 atatttctgt tcgctctcaa tgcccagcca cttggcttgg gcgccggtgc atacgatcaa
     5341 cacattacat gtaaatatat cacccgaatc accggtcagc ttgaagggcc gcgtttgcag
     5401 atcagcctca acaatcatgt cggaaatcat cgtcgtgccg acgccttcgg cctgggcttg
     5461 catctgctcc atcagccagg gcccctgaac aacctccgga aagcccggaa aattttcaac
     5521 atcggtggtg attgtcattt gaccacccgg ctgcatgccg tggatgaggg tcggctccaa
     5581 tccggcgcga gcagcgtaga tggcggcggt aagtccggca gcgccggagc cgagaataag
     5641 gactttgtga tgttgagaag acatgcggcg ggtgatctcc aattgagggt cgatggtctt
     5701 tgatgagaac ctaacataga aagctcttga ggcgcgcgca aggggacgtc cgcagtcgtt
     5761 gtccacaagt tttagtgagg tcaatctgtg gcgcctatga aaaccaaatg gtggccggtt
     5821 gttcactcat tatgcgaaag attattcgcc aaaattgaaa tattattgcg ctgagagttt
     5881 gtgagtccta caatggttcg gcattaaagg tggatcccat gagccgcgtt aagctcgata
     5941 acattgaccg caaaattctc cacgagctaa gagataatgg ccgcatcacc aatgttgagt
     6001 tggctaagcg ggtcggcatc tcggcgccgc cctgtctgcg ccgggtcaga gcgctcgaag
     6061 aagccggact gattcgcggc taccatgcag atttggaacc gaccgagctc ggctataatg
     6121 tcaccgtctt tgcccaggtt ggtctatcca gccaggccga acccgatctg gttgcctttg
     6181 aaagcttgat cgattcctgg gtcgaagtac gtgagtgcca
//
LOCUS       DASCNL010000396         2167 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000834600, whole genome shotgun sequence.
ACCESSION   DASCNL010000396 DASCNL010000000
VERSION     DASCNL010000396.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000834600"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            117..980
                     /gene="lptB"
                     /locus_tag="QF359_05430"
     CDS             117..980
                     /gene="lptB"
                     /locus_tag="QF359_05430"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HJO86382.1"
                     /translation="MASDDNTPSNSIGPDNPASINIRAVAANESSDTLTNNDGPPHLV
                     AVNFRGLTAENLGKRFDKRPIVRGVSLSIERGEVVGLLGPNGAGKTTCFYLITGLIQP
                     DYGTITLDVLDLTELPMYRRARLGIGYLPQEASIFRGLTVENNIRAVLEVVERSRERR
                     EAVLEALLAEFSITHLRRTPSLALSGGERRRVEIARALASRPHFILLDEPLAGIDPIA
                     VTDIRELISHLKDRGIGVLITDHNVRDTLDIIDRAYIIHDGMVLMDGNPTDIIGNEDV
                     RRVYLGDQFSL"
     gene            992..>2167
                     /locus_tag="QF359_05435"
     CDS             992..>2167
                     /locus_tag="QF359_05435"
                     /inference="COORDINATES: protein motif:HMM:NF016827.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HJO86383.1"
                     /translation="MVIASRLELRHSQSLVMTPQLQQAIKLLQMSNIDLDEFVESELA
                     ENPMLERDDSNASENHDGSGEKTNDSNESSGDGPDGLEAINMNSSDHVTEDQVNALDM
                     ESYDNVWDGESVAEPQGAIANEDSGSLSEWSAPTSSSSGAGSNDQFDAANYSLEQTLS
                     QEISLRDHLLNQIQMDITYPTDRIVALFLLDLLDEAGRIPDELELTAERLGCSIGRVE
                     KVLNQLQALDPPGIFARNLAECWAIQLRELDRFDPAMETLLENIELLKQHEYEKLSKL
                     CGVDLEDIKDMIDEIWALSHKPAEAFDNVITQPITPDVIMRSGPSQTWLVELNNDTLP
                     KVLVNNQYYALISKSVRTKEEKQYVANKLQTANWLVKSLHQRATTSLKVATEIVKQQD
                     "
BASE COUNT          557 a          547 c          540 g          523 t
ORIGIN      
        1 aggtttaaat tagtccttct gaggcaatat tagcttgttt caggcctgga ttcactgcat
       61 gtaataaaga tgcgataatt ggcaataaat tacaacaacg aaccaaactg taaaacatgg
      121 cgagcgacga caacacacca agcaattcaa ttggtccaga taatccggct tcgattaata
      181 ttcgagccgt cgctgccaat gagtcttcag atacactaac caacaatgac ggcccgcccc
      241 acctggtggc ggttaatttt cgcggcctga cggccgagaa tctgggcaag cgctttgata
      301 aacgccctat cgtgcgtggc gtctcgctat cgattgaacg tggtgaagtg gtcggtctac
      361 taggtccgaa cggtgctggc aagacgacct gtttttatct cataaccggt ttgatccaac
      421 ctgattacgg caccattacc ttggacgttc tggacttaac tgaattgccg atgtaccgcc
      481 gggcgcgtct tggtattggc tatctgccgc aagaggcatc catcttccgt ggcctgacgg
      541 tcgaaaacaa tatccgcgcg gtgctcgaag ttgtagaaag atcacgcgag cgccgtgaag
      601 ccgtactcga agctttgctg gctgaatttt ccatcaccca tctccgccgt acgccttcgt
      661 tggcactctc tggcggtgaa cgccgccgcg tcgaaattgc ccgtgccctg gcatcacgcc
      721 cgcattttat attgctggat gaaccgctgg ccggcatcga tccgattgcc gtaaccgaca
      781 ttcgtgaact tatttcgcat cttaaagatc gcggtattgg tgttcttatc actgatcata
      841 atgtccgcga taccttggat atcatcgacc gggcttatat tattcatgat ggcatggtgc
      901 tcatggatgg taaccccacc gatattatcg ggaatgaaga cgttcgccga gtctatctgg
      961 gggaccagtt cagcttgtag agtcctctca aatggtgata gcatcccgct tagaacttcg
     1021 acacagtcag tctctcgtta tgacgccgca attgcagcag gcgatcaaat tgctgcagat
     1081 gtcgaatata gatctcgatg agtttgtcga atccgaactc gccgaaaatc ctatgttgga
     1141 gcgcgatgac agcaacgcgt ccgaaaatca tgatggctcg ggcgagaaaa ctaacgacag
     1201 caacgaaagc agcggcgatg ggccggatgg cctcgaagcc attaatatga attcaagtga
     1261 tcatgttacc gaagatcaag tgaatgcgct cgatatggaa tcttatgata atgtttggga
     1321 tggggaatcg gtggcggaac ctcagggtgc tatcgccaat gaagatagcg gctcgctgtc
     1381 agaatggagc gctcccacca gcagtagtag tggtgccggc agcaacgacc agttcgatgc
     1441 tgccaactat tcgcttgagc aaacactatc gcaagaaatt tcactgcgcg atcatctgct
     1501 caaccaaatc caaatggata tcacctaccc aacggatcgc atagtcgctc tgtttttgtt
     1561 ggatttactt gatgaagcgg ggcgcattcc ggatgaactc gagcttacgg ctgaacggct
     1621 gggttgcagt attgggcgag ttgagaaagt gctaaaccaa ctgcaagcac ttgatccacc
     1681 gggtattttt gcccgcaacc ttgctgaatg ctgggccatt cagctccgtg agctggaccg
     1741 gtttgacccg gctatggaaa ccttgctcga aaacattgag cttttaaaac aacatgaata
     1801 tgagaagctc tcaaagctct gtggcgtcga tcttgaagac ataaaagata tgatcgacga
     1861 aatttgggcg cttagccaca agcccgccga agccttcgat aatgttatca cccaaccgat
     1921 tactcccgat gttataatgc gctctggccc ctcgcaaacc tggcttgtag agcttaacaa
     1981 cgacacgctg ccgaaggtcc tggtcaacaa tcagtattat gctttgatca gcaaatcggt
     2041 gcgcaccaaa gaagaaaagc agtatgtcgc caacaaattg caaaccgcca attggctggt
     2101 caaatctttg caccagcgcg cgacgactag tctcaaggtg gccaccgaga tcgtcaaaca
     2161 gcaggat
//
LOCUS       DASCNL010000397         2006 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000835014, whole genome shotgun sequence.
ACCESSION   DASCNL010000397 DASCNL010000000
VERSION     DASCNL010000397.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000835014"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            187..1101
                     /locus_tag="QF359_05440"
     CDS             187..1101
                     /locus_tag="QF359_05440"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO86384.1"
                     /translation="MSEEFTDNFRAIDAHHHIWRLADLAWLNGPTQPRIFGDYDAIRR
                     DYSIEEFSSDAEPEGIAGSVYIQVNWPEGKEIDEVRWVQKTAENPDSILKAIIGYANI
                     SSETCAATLKELNQFSAMRGVRQQLHWHKNPLYKFAAAPDIMTDVKWRQNFALLQEYD
                     WSFELQVFASQMKDAAQLAADFPAISMVLQHCGMPEVRSKAGLAAWLDGMKRLSQEPN
                     IYCKFSGLGTFIHENSADFIADITSQCLALFSADRCLYGSNFPIEKIWTEYPDLIQTF
                     RQSFKDLPENQQRSIFFETAAKVYKIKL"
     gene            1172..1588
                     /locus_tag="QF359_05445"
     CDS             1172..1588
                     /locus_tag="QF359_05445"
                     /inference="COORDINATES: protein motif:HMM:NF024030.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3775 domain-containing protein"
                     /protein_id="HJO86385.1"
                     /translation="MLEVDIDKIAFIIAKSREFEAQDVVHEEVEIEGITENDIQDENF
                     QESLSVVANEENNDATFDEVKAWIRSINDDDQCQIVALAWVGRGDFTTDDWDEAVKIA
                     TDEHNDRTAEYLLGMPLLPDYLEEGLAQFGLSAELS"
     gene            1632..>2006
                     /locus_tag="QF359_05450"
     CDS             1632..>2006
                     /locus_tag="QF359_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HJO86386.1"
                     /translation="MRKSQLSKSKQDRLIEHFVAGATARYAAYLVRVNPKTAVYYFHR
                     LREIIAYAVFSGEIEVDESYFGGKRKGQRGRGAAGKVPVFNLKRGGKVCTKIIADASS
                     ATLYPIIECKVVPGYIVYSDSWR"
BASE COUNT          568 a          402 c          491 g          545 t
ORIGIN      
        1 taaacctaaa aataaggcta atccaacagc gatcaacgtt gccctcgcgg aatcaaagac
       61 taagacaact gcgattgaaa atagtggttt gcgtttttgc tggccggaat acatatttca
      121 ctaaacctca aatgaaggcc taaaaacaag cttgaataac tctaacgcat agtaaaggaa
      181 tttccgttgt ctgaagaatt caccgataat tttagggcca ttgatgccca tcatcatatt
      241 tggcgcttag ccgatctcgc ctggctcaat ggtccaaccc agccgcgtat ttttggtgat
      301 tatgatgcca tccggcgcga ctatagtatc gaagaattta gcagcgatgc cgaaccggaa
      361 ggcattgccg gctcggttta tatccaggtt aattggcccg aggggaaaga gattgatgaa
      421 gtccgctggg ttcagaaaac ggcggaaaat ccggattcca tcctcaaggc cattatcggg
      481 tatgctaata tttcgtccga aacctgcgca gccacgttaa aagaactgaa tcagttctca
      541 gcgatgcgcg gagttcgcca gcagctgcac tggcacaaaa atccgctcta taaatttgcc
      601 gcagcgccag atattatgac agatgtaaaa tggcggcaga attttgctct gctgcaagag
      661 tatgactggt cgtttgagtt gcaagttttt gcctcacaaa tgaaagatgc cgcgcaattg
      721 gcggctgatt ttccggcgat atcgatggtt ttacagcatt gtggcatgcc cgaagtcagg
      781 tcaaaagccg gcctggcagc gtggctagat ggcatgaaaa ggctttccca agaaccaaat
      841 atttattgca aattttccgg cttgggcacg tttattcatg aaaattcagc agattttatc
      901 gctgatataa ccagccaatg cttggcgtta tttagcgctg accgctgcct ttatggtagt
      961 aattttccga tcgagaaaat ctggaccgaa tatccagatt tgatccagac gtttcgtcag
     1021 agctttaagg atttacccga gaatcaacag cgttcgatat tttttgaaac agccgcaaaa
     1081 gtgtataaaa ttaaattata attttgattt ttatcaaggt gccattgaaa catgaaatta
     1141 atatatttgt gttgttaatt ggaaaagaac aatgcttgaa gtagatattg ataaaatagc
     1201 tttcattatc gctaaatccc gcgagtttga agcccaggat gtggttcatg aggaagttga
     1261 aatcgaaggc ataacggaaa acgacatcca ggatgaaaac tttcaggaat ctctctcggt
     1321 tgttgccaat gaagaaaaca atgatgctac ttttgacgaa gtaaaagctt ggatcagatc
     1381 aattaacgat gacgatcaat gtcaaatcgt cgcccttgcc tgggttggcc gcggcgattt
     1441 tactaccgat gactgggatg aagcggttaa aattgcgacc gatgagcata atgaccggac
     1501 ggctgaatat ctgcttggta tgcctttgtt gccggattat ttggaagaag ggctcgccca
     1561 atttggtttg agcgctgaat tgtcttaggg gctgacccat ctaacgccat ttaggtgtta
     1621 tcatgggggc agtgagaaag agccaattaa gcaaatccaa acaagatcgt ttgatcgagc
     1681 attttgttgc tggagccacg gcccggtatg cagcttatct cgtcagggta aatcccaaaa
     1741 cagcggtcta ttactttcac agattacgcg agatcatagc ttatgcggtt ttcagtggtg
     1801 agatcgaagt tgatgaaagt tattttggcg gtaagcgcaa gggacagcgt ggtcggggtg
     1861 cagcaggaaa agtcccggta tttaatttaa agcgtggagg gaaggtctgc acgaagatta
     1921 tagcggatgc ttcttcagcg actttatacc ctattattga gtgcaaagtc gtgccgggct
     1981 acattgttta ttccgatagt tggcgg
//
LOCUS       DASCNL010000398         2468 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000839360, whole genome shotgun sequence.
ACCESSION   DASCNL010000398 DASCNL010000000
VERSION     DASCNL010000398.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000839360"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1163
                     /locus_tag="QF359_05455"
     CDS             <1..1163
                     /locus_tag="QF359_05455"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO86387.1"
                     /translation="FLLLFLTTILVFPETVNAQDTHRIGLCVPITGSGADAGKREVIG
                     AQVAVNEINAKGGIGGTKLEMIFADSGSNPHDAVNAVRKLAGDDKVLAIVGPHYSGVA
                     ESTFPLGNRIGIVQVAVASSKPGVAAANRPFAFRNTLTEDKIAVAVARAVKKRHNPKR
                     IALVVDIKDAVARAIGTKVFPGVLKKEGLTVINEKKPVTFQTGDAQFTAQITKLKALN
                     PDAIGLGALGPDALNIITEARRQGMKQPFFGTAPLIEGNMPEKGGNAVVGTIAGSIWS
                     SQLKDARSVSFIKSYKKLAKTLHPGKFTAKPDYYPVNSYDAVYMIVDAIKSKGIKPGT
                     SDLAKKRIAVKDHFAAMSSFNGIASDGFNKVGDGKKNVHVFEIKDQAWKLIE"
     gene            1201..2070
                     /locus_tag="QF359_05460"
     CDS             1201..2070
                     /locus_tag="QF359_05460"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86388.1"
                     /translation="MLAQQLANGLLLGSTYALIALGLTLVLGVFDKLNIAHGDVFMFG
                     AFAGVAAASFGAPLILAVIAGLVTSAAINVLVERSCFYPLRNAHFLAPMLSTIAFGIL
                     LQNVATQIWGSDPSRYPNIEAVTQYEVGGILLSSIHVIILVISFSVMLSVDIVIYRTK
                     LGRALRATAIDPEVAGLLGVNTKNVVLVTFLVAGALAGIAGVLTAVVYSQITPLIGIR
                     LGLIGMVAMVIGGLGNLRGAMIGGILIGLVQVLNDAYLDASYRDLIVFSLFFGFIVLK
                     PAGLFPQPSGNRS"
     gene            2079..>2468
                     /locus_tag="QF359_05465"
     CDS             2079..>2468
                     /locus_tag="QF359_05465"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86389.1"
                     /translation="MEGILTQMGVNILMAYSAYIILATGQLSLGNAGFMAIGAFCSGY
                     FTVRLGMPLPIALIIAAFTSSAVGIALGIPVLRLHGFFLVLGTLGFGETVRAFFINFE
                     PTGGAYGMRGLFGTTFEMVLITVFVVTV"
BASE COUNT          616 a          539 c          607 g          706 t
ORIGIN      
        1 attttctttt attatttttg accaccattt tggtatttcc cgaaaccgtt aacgctcagg
       61 atacccaccg aataggatta tgtgttccaa tcaccggtag tggcgctgat gcgggcaaac
      121 gcgaggtaat tggtgcccaa gttgcagtca acgaaattaa tgccaaaggt ggtattggcg
      181 gcaccaaatt ggagatgata tttgctgact ccggtagcaa cccgcacgat gccgtaaatg
      241 ccgtacgcaa acttgccggg gatgacaagg ttttggcaat cgtcggacct cattacagtg
      301 gtgtggcgga atcgacattt cctcttggca atcggattgg catagttcaa gtggccgtgg
      361 cttcttctaa acctggtgtc gctgctgcta atcgtccttt cgcatttaga aatacgctca
      421 cggaagataa aatcgccgtt gcggtcgcca gagcggttaa gaaaagacat aatcccaaaa
      481 ggattgcatt ggttgtcgat attaaagatg ccgtagcacg tgctatcggt acaaaagtat
      541 tcccgggcgt tctgaagaaa gaaggtttga ccgttataaa cgaaaagaaa ccggtaacat
      601 tccagaccgg tgacgcccaa ttcactgccc agataacgaa actaaaagcc ttaaatcccg
      661 atgcaattgg tcttggcgcc cttggtccgg acgcactgaa tattatcacc gaagcgcgac
      721 gccaggggat gaaacagccc ttttttggaa cagccccgtt gattgaaggc aacatgccgg
      781 aaaaaggcgg gaatgcggtt gttggtacaa ttgccggcag tatctggagc agccagttga
      841 aggatgcccg cagtgtatct tttattaaat cctacaagaa gctcgcaaag actttgcacc
      901 cgggaaaatt cacggcaaag cctgactact atccggtaaa ctcctacgat gctgtttata
      961 tgattgtgga tgcaattaaa tccaaaggca taaaacccgg cacgagtgat ctcgctaaaa
     1021 agcgaattgc tgtgaaagat cattttgccg caatgagttc ttttaatgga attgccagcg
     1081 atggtttcaa taaagtagga gacggaaaaa agaacgtaca tgtttttgaa atcaaagatc
     1141 aggcatggaa acttatagag tagtcaactg acactatccg actaaaacaa agacatcctc
     1201 atgttagcac agcagctagc aaacggctta cttcttggca gcacctacgc cttgattgcc
     1261 cttggactta ctcttgttct tggtgtgttt gataagctca atatagcgca tggggatgtc
     1321 tttatgtttg gagcatttgc gggcgttgcc gcagcctcat tcggtgcacc gttaattctg
     1381 gcggttatag ccggacttgt gacatccgcc gcgatcaatg ttcttgtgga aagatcatgc
     1441 ttctatccac tgcgaaacgc tcatttttta gctccaatgt taagcactat tgcgtttggc
     1501 atattactgc aaaatgtcgc tacccagatc tggggttccg atccctctcg atacccaaat
     1561 atcgaagccg tcacccagta cgaagttggc ggtattcttc tttcttcaat tcacgtcata
     1621 attttagtta tatctttttc cgtaatgttg tcggtagata tcgtaatcta caggacgaaa
     1681 ctgggacgtg cccttagagc caccgcaata gatccggaag tcgctggtct attaggtgta
     1741 aacacaaaaa atgtcgttct cgttactttt ctcgttgcgg gcgccttggc cgggatcgct
     1801 ggagtattga ccgccgtagt ttattctcag attaccccgc ttatcggcat tcgtttgggt
     1861 ctcatcggta tggtggcaat ggtaattggt ggactaggaa acctaagagg cgcaatgatc
     1921 ggaggaattc ttattggcct agttcaggtt ctcaatgacg cctatttgga tgccagttat
     1981 cgagatctaa ttgtcttctc gttatttttc ggttttatcg tgttgaagcc agccggtttg
     2041 ttcccgcaac cttcgggaaa tcgatcatga gtatgtacat ggaaggcata ttgacgcaga
     2101 tgggcgttaa tatcctgatg gcttacagcg cttatataat tttagccaca ggtcagcttt
     2161 ctctcggaaa tgctggtttc atggcgattg gcgcgttctg ctcgggatat tttacggttc
     2221 gtttaggcat gcctttgcca attgcgctta ttatcgcagc ttttacatcc agcgcggttg
     2281 gaatagcgtt aggtatccct gttttgcgat tacatggttt ttttttggta ttgggaacgc
     2341 tcggatttgg tgaaacggta cgtgcttttt ttataaattt tgagcccaca ggcggcgcct
     2401 acggaatgag aggcctgttc ggcacgacgt tcgaaatggt attgatcacc gtgtttgtgg
     2461 tgacggtg
//
LOCUS       DASCNL010000399         1457 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000839656, whole genome shotgun sequence.
ACCESSION   DASCNL010000399 DASCNL010000000
VERSION     DASCNL010000399.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1457)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1457)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000839656"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            48..398
                     /locus_tag="QF359_05470"
     CDS             48..398
                     /locus_tag="QF359_05470"
                     /inference="COORDINATES: protein motif:HMM:NF013731.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HJO86390.1"
                     /translation="MKPEDIAFLPLVPLEVKGSINLRGRIVTVIDVRFRLGLSATLLG
                     DDSKGVTIEHQNELYTMLVDEIGEVSSLNCDHREKVSGTMDPTCREFVESKFQLEGDL
                     MIVLNVGQLLRTKN"
     gene            complement(462..1457)
                     /gene="hemB"
                     /locus_tag="QF359_05475"
     CDS             complement(462..1457)
                     /gene="hemB"
                     /locus_tag="QF359_05475"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HJO86391.1"
                     /translation="MIPGKYPATRMRRNRRHDWTRRLMAENTLSPDDFILPIFVGISE
                     GRRDPIPSMPGVDRISVNLLEEVVGEAKEASIPAVVIFPEVDPAVKTPDAREAYNPDN
                     LVCQSIRTIAKAYPEMGIICDAALDPFNSDGHDGLVVDGYVVNDESIELLCKQSIVQA
                     EAGCHIIAPSDMMDGRVGAIRKTLDDTGFQDVGIMSYAAKYASVFYGPFRDAIGSKAA
                     LKGDKKTYQMDTANINEALRQVAQDIDEGADMVMVKPGMPYLDVVSRVKSEFGLPTIV
                     YQVSGEYAMLKGAVQNGWLDNDKVVLESLMSFKRAGADAILTYMAIEACRLLKKG"
BASE COUNT          395 a          346 c          331 g          385 t
ORIGIN      
        1 ttgataatca attattcggt atatctgtgc tctagattca agatattctg aaaccggaag
       61 acattgcctt ccttccgctg gtaccgctcg aagtaaaggg ttcgattaat ctccgtggcc
      121 gcatcgtgac agttattgac gttcggtttc gccttggcct aagtgcgaca ctccttggtg
      181 atgattccaa gggtgttaca attgagcacc aaaatgaact ctatacaatg ttggttgatg
      241 aaattggtga ggtttcaagt cttaattgcg atcatcggga aaaggtatca ggcaccatgg
      301 acccaacatg tcgtgaattt gttgaatcaa aatttcagct tgagggtgat ttaatgattg
      361 tgctcaatgt cggacaatta ctgcgaacca aaaattaagt aaattcaatc cagaagtggt
      421 ttaccgcggt aaggaaattt aaaagggcta agaactttgt tttagccctt ttttagtagg
      481 cgacaggctt caatagccat ataggttaaa atggcgtcgg caccggcgcg tttgaaagac
      541 attaagctct caaggacgac tttgtcgtta tctaaccacc cattttgaac cgcgcctttt
      601 aacatcgcgt attcgccgga tacctgatag acgattgtcg gcagaccaaa ctcggatttg
      661 acacggctga caacatcgag atagggcata ccgggtttaa ccatcaccat atcggcacct
      721 tcatcaatat cttgagcaac ttgacgcagg gcttcattga tgtttgcggt atccatttga
      781 taggtctttt tatcgccttt gagtgccgct ttagaaccga tggcatcgcg aaaaggccca
      841 taaaatacag aggcgtattt cgccgcataa gacataatgc caacgtcttg aaaaccggta
      901 tcatccaagg tttttctaat cgcaccaacg cggccatcca tcatgtcgga aggcgcaatg
      961 atgtgacagc cggcttcagc ctgaacaatg gattgtttac acagcaactc aatagattcg
     1021 tcgttgacaa catagccatc aacaaccagc ccatcgtgac catcactgtt aaacggatct
     1081 agcgctgcat cgcagatgat ccccatttct gggtaggctt tggcaatagt gcgaatagac
     1141 tgacacacca aattatctgg attataggcc tcccgcgcat caggtgtttt gaccgctgga
     1201 tctacttccg gaaaaatcac cacagcaggg atgctagcct ctttagcctc gccaaccact
     1261 tcttccaata agttcaccga gatacgatca acgcccggca tcgatggaat aggatcgcgt
     1321 cggccctcac tgatgccgac aaaaatcggc aggataaaat catccggtga cagcgtattt
     1381 tcagccatca gccgccgagt ccaatcatgg cgccgattgc ggcgcatgcg ggttgctgga
     1441 tatttacctg ggataat
//
LOCUS       DASCNL010000400         1630 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000841319, whole genome shotgun sequence.
ACCESSION   DASCNL010000400 DASCNL010000000
VERSION     DASCNL010000400.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000841319"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(22..>1630)
                     /locus_tag="QF359_05480"
     CDS             complement(22..>1630)
                     /locus_tag="QF359_05480"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86392.1"
                     /translation="LRWLTLFFTISCTSKFKKWGMAMKSTMTLRDDLPVYPTIIHAVQ
                     EAAKIAPDRDAFICEDTRVTYVQYERAVGGLAHRLQEMGAKGGRVAIIMGTSVETSVA
                     AMGGMAAGAQIALMNPMYTEHEMAPLLADVNPAVIICSSPFTDQVNEQAKKLGVENII
                     VMGEGDFALEAWINDAAMKLPEPLPKPEDKSAMFFTGGTTGLPKGAEHNHAMMELFCR
                     IICTPWQLDFDTERVLSVAPIFHIWGHHFVNIMPIYIRATTVIIPMYKPDDVLAAFED
                     HDITVFAGGPPVIYMGLLASEKIDTTDFSKLKYCLSGGAACSEYLLNTWEEKTGCMLL
                     EGGGMSEGAPVGCNPTHGERRLMSIGQIPPLTEIEIVDLESGETIMPDGKRGEVRIKA
                     DTFTTSYRNRPEETAETIRDGWLYTGDIGYFDEDGYLFLVDRKKEMILVGGYNVYPRE
                     VDEVLLNHDAIREAATVAMEDDFSGEVVKACISLVPGEELSEQNVIDYCTERLVKYKV
                     PKVVEFFNELPKTGPAKIDKLKLRGLR"
BASE COUNT          379 a          446 c          405 g          400 t
ORIGIN      
        1 cgatttgaac gggctttaaa cctagcgcag cccgcgcagc tttagtttat cgatcttcgc
       61 cgggccagtt ttcggcagct cgttaaagaa ttcaacaact ttagggactt tgtatttgac
      121 taggcgctca gtgcaataat cgatgacgtt ttgttcgctt aactcttcac caggtaccag
      181 cgaaatacag gctttgacca cttcgcccga gaagtcatct tccatggcga ctgtcgcagc
      241 ctcccggatg gcatcgtgat tgagcagaac ttcgtcgacc tctcgcgggt aaacgttata
      301 gccgccgacc aggatcattt cctttttgcg atcgaccaaa aacagataac catcttcgtc
      361 gaaataacca atatcgccgg tgtaaagcca gccgtcgcgg atcgtttccg cggtctcttc
      421 cggacggttg cggtagctgg tagtaaaggt gtctgctttg atgcgaactt cgccacgttt
      481 tccatccggc atgatcgttt caccactttc gagatcgacg atttctattt ccgtcagggg
      541 cggaatttgc ccaatcgaca tcaagcggcg ctcaccatgg gtcggattgc agccaaccgg
      601 cgcaccttca gacatgccgc cgccttccag caacatacaa ccggttttct cttcccaggt
      661 attcagtaaa tattctgaac acgccgcacc gcctgagaga cagtacttaa gcttagaaaa
      721 atccgtggtg tcgattttct cgctggccaa gagccccata tagataaccg gtggcccgcc
      781 ggcaaacaca gtgatgtcgt gatcttcaaa agctgctagc acatcgtcag gcttatacat
      841 cggaatgata accgtggtcg cccggatata gatcggcatg atattgacga aatggtgccc
      901 ccagatatgg aaaatcggcg ccaccgacaa gacacgctcg gtatcaaaat cgagctgcca
      961 gggcgtgcag ataatacggc aaaacaactc catcatggcg tggttgtgct ccgccccttt
     1021 gggcaggccg gtggtgccgc cagtaaagaa catggctgat ttatcttcag gtttgggtaa
     1081 gggttccggc aatttcatcg ccgcgtcatt gatccaagct tcgagggcaa agtcgccttc
     1141 gcccatcacg atgatgtttt cgacgccgag tttttttgcc tgctcgttga cttgatcggt
     1201 gaaaggcgaa ctacaaataa tgacggcagg gttgacatca gccagtagcg gtgccatttc
     1261 gtgctcggta tacatcgggt tcattaaggc aatctgggcg ccggccgcca taccgcccat
     1321 ggccgcaacg gatgtctcga cggaagttcc catgatgatt gccactcgtc cgcccttagc
     1381 gcccatttcc tgcaggcgat gcgccaaacc accaactgca cgttcatact ggacgtaagt
     1441 gacccgcgtg tcttcgcaga taaaggcgtc acggtcggga gcaatcttgg cggcttcctg
     1501 taccgcatga atgattgttg gataaaccgg taaatcatcc cgcagcgtca ttgttgattt
     1561 catagccatc ccccattttt taaatttgct cgtgcaggat atagtgaaga acaaggtcag
     1621 ccatcgcaac
//
LOCUS       DASCNL010000401         1777 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000842622, whole genome shotgun sequence.
ACCESSION   DASCNL010000401 DASCNL010000000
VERSION     DASCNL010000401.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000842622"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1051
                     /locus_tag="QF359_05485"
     CDS             <1..1051
                     /locus_tag="QF359_05485"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HJO86393.1"
                     /translation="SIETGAGDGASFSDEALKEAGAEITSNARTAILGSDLILKVRGP
                     EADAGDDMADYSSDKILIASLSALGNKEQMDKLAATGVTAFAMELMPRITRAQSMDIL
                     SSQSNLAGYKAVLDAASELGRAYPMMMTAAGTIPPAKVFIMGVGVAGLQAIATAKRLG
                     AVVTATDVRPATKEQVESLGGKFLEVDPKMEKDAQTEGGYAKEMPPEYFEKQKEVVAE
                     HIKKQDVVITTALIPGRPAPILVTEEMVASMPDGAVVVDLAVEAGGNCPLSEFGQTVK
                     SHGVSIIGHANVPSRIAEDASQLFAKNLVNFITPLVDPETKSLNIDWEDEIIQGTLVC
                     KDGKVVHPRLTDEGS"
     gene            1054..1401
                     /locus_tag="QF359_05490"
     CDS             1054..1401
                     /locus_tag="QF359_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HJO86394.1"
                     /translation="MGTEKLAAKAAESASSGDPFIFMFTVFVLAVFIGFYVVWSVTPA
                     LHSPLMSVTNAVSSVIIVGALIAAGPADMGFSKIMGFIAVVLASVNIFGGFIVTNRML
                     SMFKKKPRKKEAN"
     gene            1401..>1777
                     /locus_tag="QF359_05495"
     CDS             1401..>1777
                     /locus_tag="QF359_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HJO86395.1"
                     /translation="MSETFTGFAYLIAAVCFILALRGLSSPESARKGNMLGIAGMVIA
                     IATTLADPSILSFEMIIVGVVIGGFIGTVVALKIQMTALPQLVAAFHSLVGLAAVVVA
                     AAAFFSPEAYGIGVLGNIQAASL"
BASE COUNT          427 a          381 c          491 g          478 t
ORIGIN      
        1 ctctatagaa actggggccg gtgatggtgc gtcttttagc gacgaagcat taaaagaagc
       61 aggtgcagaa attacatcga atgcaagaac agcaatttta ggcagtgatt taatcctcaa
      121 agtgcgcggc ccggaagcag atgcaggcga cgatatggcg gactattcgt cggacaaaat
      181 tctcatcgcc agtttatcgg cactcggcaa taaagagcaa atggataaat tggcagcgac
      241 tggtgtaact gcctttgcca tggaactcat gccccggatt acgagggcac agtcgatgga
      301 tattctttcc tcacaaagta acttggccgg ctataaggct gtgttggatg cggcgagtga
      361 attgggccga gcgtatccga tgatgatgac cgcagcgggc acaattccac cggctaaagt
      421 gttcataatg ggtgtcggtg tggctggtct tcaagcgatc gcgacggcga aacgcctggg
      481 cgccgtggta actgcgacag atgttcgacc ggcaaccaaa gagcaggtcg agagcctcgg
      541 tggtaaattc ctcgaagttg atcctaaaat ggaaaaagat gcgcagacgg aaggtggtta
      601 cgccaaggaa atgccgcctg agtacttcga aaaacagaaa gaagttgtcg ctgagcacat
      661 aaaaaaacag gatgtggtta ttacgacggc gctcattcca ggacgcccgg cacctatttt
      721 ggtgaccgaa gaaatggttg cctctatgcc ggatggtgca gtggtcgttg atctggcggt
      781 tgaagccggt ggtaactgtc cattgtctga gtttggtcaa accgttaaat cgcacggtgt
      841 tagcattatt ggccatgcca atgtaccaag ccgcatcgcc gaagatgcca gccagctttt
      901 tgcaaaaaat ctcgtgaact ttattacccc actagttgat ccggagacca agtctctcaa
      961 catcgactgg gaagatgaaa tcattcaagg aacattggtt tgtaaggatg gcaaagttgt
     1021 ccatccaaga cttaccgatg aaggaagtta attatgggta cagaaaaatt agctgctaaa
     1081 gctgcagagt ccgcctcatc aggtgatccg tttattttta tgtttacggt ttttgtcttg
     1141 gccgtcttca ttggttttta tgtggtttgg agtgtgacgc cggcactgca ttcgccgctc
     1201 atgagtgtga ccaacgcagt gtcttccgtg attatcgtcg gtgcgcttat tgctgccggt
     1261 ccagcagata tgggtttttc caaaattatg ggcttcattg ccgtggtttt ggcatcggta
     1321 aacatttttg gtggctttat tgttaccaat cgaatgttgt ctatgtttaa gaagaagccg
     1381 cgtaagaagg aagccaactg atgagcgaaa catttacagg cttcgcctat ctgattgcgg
     1441 cagtgtgttt tattttggcg ctgcgtggtc tcagttcgcc ggaaagtgcc agaaaaggta
     1501 atatgcttgg tatcgctggt atggtcattg ccattgcgac gacgctggcc gatccatcga
     1561 ttttgagctt tgaaatgatt atcgtgggtg tcgttattgg tggattcatc ggtacagtgg
     1621 tggcgcttaa aatccagatg acggctttac cgcaattggt tgcggccttt cactcacttg
     1681 ttggcttggc cgccgtggtt gttgccgccg ccgcgttctt ttctccggaa gcctatggca
     1741 ttggcgtcct tggtaatatt caagctgcga gcctgat
//
LOCUS       DASCNL010000402         1402 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000843283, whole genome shotgun sequence.
ACCESSION   DASCNL010000402 DASCNL010000000
VERSION     DASCNL010000402.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1402)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1402)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000843283"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            74..1036
                     /locus_tag="QF359_05500"
     CDS             74..1036
                     /locus_tag="QF359_05500"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJO86396.1"
                     /translation="MEVVPTNLAGASYEDKPGLVTRLRYRLRYPADAAGAVKQILNSL
                     NGNQFDVLWLERAVEIGANTLCSVKKLNPKIKIVWYAEDDMMTPLHRTRQVEAAMPYY
                     DLWVTTKSFNAEPKEVPTFGVKNILFVNNSYDPTLHRPINPSEQDRSDFGAEVSFVGT
                     FEKYRADSLVYLARQGVPVRVWGNGWAAYKDKVPGLLIEGRPAYDDEYVKVICSSKIN
                     LCFLRKENRDLQTCRSIEIPASGGFMLHERNAEMAAIFNEDREAAYFASDQELLEQCK
                     KWLLVFTAREEVAKNGLDKVTIGSFSHSERLQEILDAARQAGPE"
     gene            1033..>1402
                     /locus_tag="QF359_05505"
     CDS             1033..>1402
                     /locus_tag="QF359_05505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86397.1"
                     /translation="MRVLVNALSARKGGIVTYTNNLLEAFQNRGIDINVAVSEDFEIK
                     FGQLVSRLKVARFSPLKRLIWEQTLWRKFVTNCNPDILFSSANFGLLNSPVNQILLLR
                     EGGLFDPFYLANMTASLGVWN"
BASE COUNT          382 a          273 c          354 g          393 t
ORIGIN      
        1 atttgtcggt cagacagtcg caggttcaag gacagtccaa cggattaagg catttgaaaa
       61 attgggatgc cgagtggaag tcgtgccgac aaatttggcg ggtgcgagtt acgaggataa
      121 accgggtctc gtgactaggc tgcgttaccg gttacgatat cccgccgatg ctgctggtgc
      181 tgtaaaacaa atattaaata gcctgaatgg taaccaattt gatgttttgt ggcttgagcg
      241 tgcggtagaa attggggcca atactctttg cagcgttaaa aaactaaacc ctaagataaa
      301 aatcgtttgg tatgctgaag acgatatgat gactcctctt catcgtaccc ggcaggtgga
      361 agcggcgatg ccatattacg atttatgggt gacgaccaag tcttttaatg cggagccaaa
      421 agaggtgccg acattcggtg ttaaaaatat tttattcgtc aacaattctt acgatcccac
      481 cctccatcga ccgatcaatc caagtgaaca ggatagatct gactttggtg cagaagtgag
      541 ttttgtcggt acttttgaaa aataccgggc agacagtctg gtttatctcg cccggcaagg
      601 cgttccggtc agagtatggg gaaatggctg ggccgcctat aaagacaaag tgcctggcct
      661 cttaattgaa ggccgaccgg cttatgatga tgagtacgtc aaagtaattt gttcgagcaa
      721 aataaatctt tgtttcttac gtaaggaaaa tcgtgatctc cagacctgcc gttcaatcga
      781 gattcctgcg agtggcggat ttatgctaca tgaacgcaat gctgaaatgg cagctatctt
      841 taatgaagat cgtgaggctg catattttgc cagtgatcag gaattacttg agcaatgtaa
      901 aaaatggttg ttggttttca cagcgagaga agaagtagcc aaaaatggat tggataaagt
      961 gaccataggt tcttttagcc atagtgaacg cctgcaggaa atccttgatg ctgccagaca
     1021 ggcaggcccg gaatgagagt tctcgtcaat gccttatcag cccgcaaagg cggtattgtc
     1081 acctacacca ataatctttt ggaggccttt caaaatcgcg gtatcgatat caatgttgca
     1141 gtatctgaag attttgaaat taaatttgga caattggtta gccggcttaa ggttgcccga
     1201 ttttcaccgt tgaaaaggtt aatttgggaa cagacgttgt ggcggaaatt tgtcaccaac
     1261 tgcaatcctg atattctttt ctcgtccgct aatttcggtt tattgaatag tccggtaaat
     1321 caaatcttat tgttgcgtga aggcggtttg tttgatccat tttatctcgc caatatgacg
     1381 gcgtcgcttg gagtgtggaa cg
//
LOCUS       DASCNL010000403         4796 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000849047, whole genome shotgun sequence.
ACCESSION   DASCNL010000403 DASCNL010000000
VERSION     DASCNL010000403.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4796)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4796)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4796
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000849047"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..952)
                     /locus_tag="QF359_05510"
     CDS             complement(<1..952)
                     /locus_tag="QF359_05510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86398.1"
                     /translation="MRSSVLLSTFLHAVVIVLGVYGLPAIRKPPVLRDIPMVVEIVPV
                     DFKTNLPSASELPKKPEKKTEKKPPKPPPAPKVKKAPPAPTPPPPAKESEVAVVPPPP
                     EPQAKPKPKPKVEAKPKPKPKPKTKPKPKPKPKPKPKPKPKLKAKPKPKAPSSLARIK
                     PRRKPKPPDRFAMVLKNLEKTLEKPVVKKKEKPKKQKIKAEEDLMARLSKSLTRKPIE
                     FDPNKKMSLSEQHVMINIVRRTMEPCWIVRAGSKDAQNIHVEIMVALRSDGIVSNAEI
                     TNKNELKKDPFSLAAGESALRAVLNPSCQPYKLPADKYAVW"
     gene            complement(958..1464)
                     /gene="tolR"
                     /locus_tag="QF359_05515"
     CDS             complement(958..1464)
                     /gene="tolR"
                     /locus_tag="QF359_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098567 - periplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolR"
                     /protein_id="HJO86399.1"
                     /translation="MAVDNGGRGGRGGRRRREHTRPISEINVTPMVDVMLVLLVVFMV
                     TAPLLTVGVQVDLPKTKAGLIQDQVEPLAVTVSASGQIFLQDKEIELSVLAPRLIAIT
                     GANPDVRIFVRGDKAIEYGRVMEVMGTLNAAGFNKVALITEMPHSGVKKTSSKKPRKK
                     PQSNTGKK"
     gene            complement(1473..2198)
                     /gene="tolQ"
                     /locus_tag="QF359_05520"
     CDS             complement(1473..2198)
                     /gene="tolQ"
                     /locus_tag="QF359_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HJO86400.1"
                     /translation="MEGNAVEAAQMAGAIAATDFSVWGLFLKADIIVKAVMIFLFVAS
                     IWCWAIIIEKTLRLRKLNAAAAEFEDSFWSGGSLDALYDRIGAQPRDPMSAVFAAAMR
                     EWRRSNEAGSGRDNGSSLMERIHRVMDVTVNREVERVERQMTILASTGSTAPFVGLFG
                     TVWGIMNSFQAISITKNTSLAVVAPGIAEALFATALGLVAAIPAVIAYNKISKDMDRY
                     AARLDDFANEFSAIVSRQMEGRE"
     gene            complement(2201..2656)
                     /gene="ybgC"
                     /locus_tag="QF359_05525"
     CDS             complement(2201..2656)
                     /gene="ybgC"
                     /locus_tag="QF359_05525"
                     /inference="COORDINATES: protein motif:HMM:TIGR02799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HJO86401.1"
                     /translation="MNKIDPSVSSIMDGKHRLPVRVYYEDTDSGGVVYYANYLKYAER
                     ARTELLREIGSEHQTIKEKLGVGFVVRSCNADYQKPAHLDDLLEVETEILAVRGTSIQ
                     MRQTVTRANEALVIMEVKLACMNFDGGATRIPEKVRTVIAELVISKSED"
     gene            complement(2649..3695)
                     /gene="ruvB"
                     /locus_tag="QF359_05530"
     CDS             complement(2649..3695)
                     /gene="ruvB"
                     /locus_tag="QF359_05530"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HJO86402.1"
                     /translation="MDEERLINPDAGVGDVVDAQTRPQTLVEFVGQRSVCDNLRVFVE
                     AARGRSEAMDHVLLFGPPGLGKTTLAQIVSRELGVGFRATSGPVIAKAGDLAAILTNL
                     EVRDVLFIDEIHRLSPAVEEILYPAVEDFQLDLVIGEGPAARSVRIDLQPFTLVGATT
                     RSGLITTPLRDRFGIPLRLSFYDVDELQDIISRNARILDLDLTDDGAAEIAKRSRGTP
                     RVAGRLLRRVRDFATVESNSTVDAKIADAALNRLDVDVIGLDAMDRRYLKCIADNYGG
                     GPVGAETLSAALSEERDTIEEVIEPYLIQQGLLMRTPRGRVLAAGAYRHLGIAAPKNL
                     KQLELLAQDEGEDE"
     gene            complement(3688..4311)
                     /gene="ruvA"
                     /locus_tag="QF359_05535"
     CDS             complement(3688..4311)
                     /gene="ruvA"
                     /locus_tag="QF359_05535"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HJO86403.1"
                     /translation="MIAKLTGLVDSTGEDYVIIDVGGVGYSVFCSNRTLNMLATATGT
                     VSVMIETHVREDHIHLYGFADEAERAWFKLLITVQGVGAKVCLAILSVLSPDNLVQAI
                     AAQDKTAVTQAPGVGPKLATRILSELKDKVGGISLGSTTAVLEGEVAYAEGGNQFAND
                     AVSALVNLGYGRSDAFRVVHQAAAKLGADASVEVLIKDGLSELSAHG"
     gene            complement(4308..>4796)
                     /gene="ruvC"
                     /locus_tag="QF359_05540"
     CDS             complement(4308..>4796)
                     /gene="ruvC"
                     /locus_tag="QF359_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HJO86404.1"
                     /translation="RNTGWGIIESDGNRLTYVGDGVVKSDAALSLAERLVQLHDGLTQ
                     ILEDFQPAEVAVEETFVNVNAASTLKLGQARGIALFVPSKFGLPVAEYSPNLVKKSLV
                     GSGHAAKEQVQMMIKTLLPGCDFQSTDSADALAIAICHAHHRGSAVHQAALMAVAQET
                     SV"
BASE COUNT         1127 a         1349 c         1149 g         1171 t
ORIGIN      
        1 tccagacggc atatttatca gctggtaatt tatagggctg gcagctagga tttaagaccg
       61 cccgcaaggc actttctcca gcggccagac taaagggatc ttttttcagc tcatttttgt
      121 tggtaatctc ggcattggaa actatgccat ccgagcgcag cgccaccata atctcaacat
      181 ggatgttttg cgcatctttg gagccggcgc ggacaatcca gcacggctcc atggtccggc
      241 gaacaatatt gatcatcaca tgctgctcgc tcagcgacat ctttttatta ggatcaaact
      301 ctatcggttt gcgcgttagc gatttggaaa gccgtgccat caaatcttct tcggctttga
      361 tcttctgctt ttttggtttt tcttttttct ttaccactgg tttttccaaa gttttttcca
      421 ggtttttcaa aaccatggca aagcggtccg gtggtttagg cttgcggcgc ggttttatcc
      481 tcgccagact cgatggcgct tttggcttgg gcttcgcctt aagcttaggt ttcggctttg
      541 gtttcggctt aggcttaggt ttcggctttg gtttcgtctt aggcttaggt ttcggctttg
      601 gttttgcctc gactttaggt tttggcttcg gttttgcctg aggctccggt ggtggcggca
      661 cgacagcaac ctccgactct ttggccggtg gtggtggcgt tggtgccggc ggtgcttttt
      721 ttacttttgg ggccggtggc ggcttcggtg gtttcttttc tgtttttttc tcaggttttt
      781 ttggcagctc agatgccgag ggtaaattgg ttttaaaatc aaccggtacg atctcaacca
      841 ccatcggaat gtctcgcagc acaggcggtt tgcggatggc cggcaatcca taaacgccaa
      901 gcacaatcac caccgcatgc aaaaaagttg aaagcaaaac acttgagcgc atctaaatta
      961 tttcttccca gtattacttt gtggtttttt tcggggcttt ttactggaag tttttttaac
     1021 gccggaatgt ggcatttccg tgatcaaggc gactttattg aaaccggctg cattcagcgt
     1081 ccccattacc tccatgacgc ggccatattc aatcgctttg tcgccgcgga caaaaatacg
     1141 gacatcggga ttggcgccgg tgatggcgat aagccgtggc gccagcaccg ataattctat
     1201 ttctttatct tgcagaaata tctgaccact ggcgctgacg gtgactgcaa gtggctcaac
     1261 ctgatcttga ataaggccgg ctttggtttt aggcagatca acctgtaccc cgacagtcaa
     1321 caacggtgcc gtcaccataa agacaaccag tagcaccagc ataacgtcaa ccatcggcgt
     1381 aacattaatc tcagatattg gccgcgtatg ttcgcgccgg cgccgacctc cccggccacc
     1441 cctgccaccg ttatcaaccg ccattgccat ttctactctc gtccttccat ttgacgggac
     1501 acaatggcgg aaaactcatt ggcgaaatca tcgagccggg cggcatagcg atccatgtct
     1561 ttggagattt tgttataggc aatcaccgcc gggatggcgg caacgagacc tagcgcggtg
     1621 gcaaataaag cttcggcgat acctggggcg acaacggcaa ggctggtgtt tttggtgatt
     1681 gagatcgcct ggaaactgtt catgatcccc cagacagtgc cgaacaaacc aacaaacggc
     1741 gcggtagagc ctgtcgaagc gaggatagtc atttgccgct cgacccgttc aacctcgcgg
     1801 ttgaccgtca catccatcac tcggtggatg cgttccatca ggctcgaacc attgtcacgg
     1861 ccggaaccag cttcatttga tcgccgccat tcccgcatcg ccgcagcaaa aactgccgac
     1921 attggatcgc gcggctgtgc gccgatccgg tcatacaacg catccaggga gccgcccgac
     1981 caaaagctgt cttcaaactc agccgccgcc gcgtttaatt ttctgagacg aagtgttttc
     2041 tcaatgatga tcgcccagca ccaaatcgac gccacaaaca gaaaaatcat caccgcttta
     2101 acgataatgt cagcttttag aaataaaccc cacaccgaga agtcagttgc tgcgatcgct
     2161 cctgccattt gagcggcttc taccgcattg ccttccatct ttagtcctca cttttggaaa
     2221 ttactaattc ggctatcact gtacgaacct tttcggggat gcgcgttgcg ccgccgtcaa
     2281 aattcatgca ggcgagtttt acctccataa tcactaatgc ttcgttagct cttgtcacag
     2341 tctggcgcat ttggatgctg gtgccccgca ccgccaaaat ctcggtttca acttcgagca
     2401 gatcatctaa atgtgccggt ttttgataat ccgcgttgca gctacgaacg acaaaaccaa
     2461 caccaagctt ctcttttatc gtttgatgct cggagcctat ttcccgcaac aactcagtac
     2521 gagcacgctc ggcatatttc aaatagttgg cgtaataaac gacgccgccg gaatcggtat
     2581 cttcataata gactcggact ggcagccggt gcttaccatc cattatcgaa gacaccgaag
     2641 gatcgatctt attcatcttc accttcatcc tgggctaaga gttccaactg tttgagattc
     2701 ttcggcgcgg cgataccgag atggcgatag gcgcctgccg ctaatacacg gcctcgcggg
     2761 gtgcgcatca acaagccctg ctggatcaag tagggttcaa tcacttcttc aatggtatcg
     2821 cgctcttccg acagtgctgc cgacaaggtt tcagcgccaa ccggtccgcc gccataatta
     2881 tcggcgatac atttaagata gcgccggtcc atagcatcca gccctatcac gtcaacatcc
     2941 aagcgattaa gcgcggcatc ggcaatcttg gcatcgacgg tgctgttact ttccacggtg
     3001 gcgaaatccc gcacccggcg cagtaatcgt cctgccaccc ggggtgtccc ccgagagcgt
     3061 ttggcgattt ctgccgcccc atcatcggtg agatcaagat caagaatacg cgcgttgcgg
     3121 ctgatgatgt cttgcagttc gtcaacatca taaaatgaaa gacgcaacgg tataccaaaa
     3181 cgatctctca gcggtgtcgt gatcaggccg gaccgggttg ttgcccccac taaagtaaag
     3241 ggttgcagat caatgcgcac ggagcgtgcc gccgggcctt caccgatcac cagatcaagc
     3301 tggaagtctt cgaccgccgg ataaagaatt tcctcgaccg ccgggctgag gcgatgaatt
     3361 tcatcaatga acaagacatc ccgcacctca agattggtca gaatggcggc gagatcaccg
     3421 gctttggcga tcaccggacc cgatgtcgcc cgaaaaccaa caccaagttc ccgcgacaca
     3481 atttgagcca gcgtcgtttt gccaagcccc ggaggaccaa acagcaaaac gtgatccatc
     3541 gcctcactgc gcccgcgcgc ggcctcaaca aaaacccgga gattgtcaca gacgctgcgc
     3601 tggccgacaa attcaacaag ggtttgcggg cgcgtttgcg catccacaac atcaccaaca
     3661 ccggcgtcag gattgatcaa gcgctcctca tccatgggca cttaactccg ataagccgtc
     3721 tttgatcaaa acctcaactg aagcatctgc ccccagcttc gctgcagcct gatgcaccac
     3781 ccgaaacgca tccgagcggc catagccaag atttaccaat gccgaaaccg catcattagc
     3841 gaattgattg ccaccttcag cgtacgcaac ttcaccttct aagacggccg tcgtggaacc
     3901 gagtgagata ccgccaacct tatctttaag ctcacttaaa atcctggtcg ccaatttagg
     3961 tccaacgccg ggtgcctggg tcaccgccgt tttatcttgc gcggcaatcg cctgcaccaa
     4021 attgtcaggg gacaaaacgg ataagatagc caggcaaact ttggcgccaa caccttgcac
     4081 tgttatcagc agtttaaacc aggcgcgctc agcttcatcg gcaaagccat aaaggtgaat
     4141 atgatcttcc cgcacatgag tttcaatcat caccgacacg gtaccagttg cagttgccag
     4201 catattgagg gtgcgattgg aacaaaatac cgaatagccg accccgccaa catcaatgat
     4261 aacataatct tcgccggtgg aatcaaccag acctgtcagc ttggcaatca taccgaagtc
     4321 tcctgggcga ccgccatcaa tgcagcctga tgcaccgccg agccccggtg atgggcatga
     4381 caaatcgcaa tggccagtgc atccgctgaa tcagttgact gaaaatcaca ccctggcaac
     4441 agggttttta tcatcatttg cacttgttcc ttcgccgcgt gccccgaacc gacgagagat
     4501 ttcttgacga gattcggtga atactccgcc accggtagac caaattttga tggcacaaat
     4561 aaggcaatgc cacgcgcttg ccccaatttc agggtcgaag ccgcattaac gttaacaaaa
     4621 gtctcctcaa cggcaacttc tgccggctga aaatcttcga gaatttgggt aaggccatcg
     4681 tgcaattgaa caagccgttc ggcgagacta agagcggcat cacttttaac gacgccgtcg
     4741 ccaacataag tcaaacggtt gccgtcagac tctatgatac cccaaccggt attacg
//
LOCUS       DASCNL010000404         1186 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000849499, whole genome shotgun sequence.
ACCESSION   DASCNL010000404 DASCNL010000000
VERSION     DASCNL010000404.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1186)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1186)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000849499"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="QF359_05545"
     CDS             complement(<1..518)
                     /locus_tag="QF359_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HJO86405.1"
                     /translation="MSEPALRLVEKKDIDKEKALDAALSQIERNFGKGSIMKLGQQDA
                     LDIEAISTGSLGLDIALGIGGLPKGRVIEIYGPESSGKTTLSLHAVAEAQKVDGTCAF
                     IDAEHALDPGYAQKLGVNVEELLISQPDAGEQALEIADTLVRSGAIDVLVIDSVAALV
                     PRAELEGEMGDH"
     gene            complement(928..>1186)
                     /locus_tag="QF359_05550"
     CDS             complement(928..>1186)
                     /locus_tag="QF359_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HJO86406.1"
                     /translation="NSAVERVIEIEREKGPDLKIDDIADLVAGVYPKVMNDGKMDSGA
                     WSCGMVAGLINDVPTCQELIEGMVAEAKLIISGNLAELVQD"
BASE COUNT          294 a          310 c          246 g          336 t
ORIGIN      
        1 tgatggtcac ccatctcacc ttcaagctcg gcccgcggca ccaaggccgc cacactgtcg
       61 atcaccaaca catcgatggc gccggagcgc accagcgtat cagcgatttc cagcgcctgc
      121 tcaccggcat ccggctgcga gatcagcagt tcttcaacat taacgccgag cttttgggca
      181 taacccggat caagcgcatg ttccgcatca atgaaagcac aggtgccgtc gactttttgc
      241 gcttccgcca ccgcgtgcaa ggaaagcgtt gtcttacccg agctttccgg cccataaatt
      301 tcgatcaccc ggcctttcgg caaaccgccg ataccaaggg caatatccag accgagcgag
      361 cccgtcgata ttgcttcaat atcgagcgca tcctgctggc caagtttcat gatggagcct
      421 ttgccaaaat tacgttcaat ctggcttaag gcagcatcga gtgctttttc cttatcgatg
      481 tcttttttct ccacgagacg aagtgctggt tctgacatgt aagtcccctt ccttatttca
      541 tagggtgttg ttgagtgcaa ctaggtgaaa ttgtactctt tttgttctat tttacaagta
      601 ttttttataa cttattaaaa ataaatgatt tttaaagtta tgttctaaat acgttcacag
      661 ataattaagg ttaaattcgc aaatttgaga tccgataagg cacaatgatt ttgtcccatc
      721 tgattctcgt tcgcaggcgt tatggcgggg ccagaggagg tttttgacaa tgcgcttagt
      781 taataatgct aacacgacta atatttcaaa ttgccgtatc caatattcta ttaatgtccg
      841 ctatcgggtg caaagcggac ttaaatataa tattgggcgc tacattttat taactttagt
      901 cgcgtcctat ttgttattca atcgagccta atcctgcact aattctgcca gattgccgct
      961 aataatcaac ttggcttcgg cgaccatacc ctcgatcaac tcctggcagg ttgggacgtc
     1021 attgatgagg ccagcgacca taccgcaact ccaagcgccg gaatccattt tgccgtcatt
     1081 catgactttg ggataaacac cggcgaccaa atcagcaata tcgtcaattt tcagatcagg
     1141 ccctttttcc cgctcaatct cgataacccg ttccaccgcc gaattg
//
LOCUS       DASCNL010000405         1266 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000850986, whole genome shotgun sequence.
ACCESSION   DASCNL010000405 DASCNL010000000
VERSION     DASCNL010000405.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000850986"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            60..881
                     /gene="proC"
                     /locus_tag="QF359_05555"
     CDS             60..881
                     /gene="proC"
                     /locus_tag="QF359_05555"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HJO86407.1"
                     /translation="MDTRILLVGCGKMGGALLGGWLDQGIPGTNVHAIEPNENLWQDI
                     AGPFIEQGVTFNAAPDELGADFEPDFVLFAVKPQMADEVVPAYKKYAGSATFISIAAG
                     KTIAFFESNLSSEAAIIRIMPNIPAAVRRGISIACGNANVSEAAKSTCLELLNAVGAA
                     SWIADESLIDAVTAVSGSGPAYVFLLAETMTQAGIEAGLSPEIASLLAVHTVAGSGEL
                     LVQSDSDAETLRKNVSSPGGTTEAALSILIGENGMQELMSKAIAKAVERSKELAG"
     gene            complement(1008..>1266)
                     /locus_tag="QF359_05560"
     CDS             complement(1008..>1266)
                     /locus_tag="QF359_05560"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJO86408.1"
                     /translation="EEVLAAEGERLQLSDIIAKALANLPDREQFIIRHRYFSEAKQTF
                     AAIGKELNLSKDRVRQLEARALKALQDLLEPALRGHQLFLK"
BASE COUNT          300 a          320 c          339 g          307 t
ORIGIN      
        1 ggcaaggatc cggcagaggc aattgaggct tcaattctgg agcctatcgg cgaggcttaa
       61 tggataccag gatacttctc gttggctgcg gcaagatggg tggcgcgctt ctcggcggct
      121 ggctcgatca aggtattcca ggcaccaatg tccatgccat tgaacccaat gaaaacctgt
      181 ggcaagacat tgccggtcca ttcatcgagc aaggggtgac gtttaatgcg gcgccagacg
      241 agcttggcgc cgactttgag cctgactttg tgctgtttgc cgtcaaaccg cagatggcgg
      301 atgaggttgt tccggcctat aaaaaatacg ctggcagcgc caccttcatt tccatcgccg
      361 ctggcaagac catcgccttt tttgaatcca acttgagcag tgaagcggcc atcatccgta
      421 tcatgccaaa catccctgct gccgtgaggc gcggaatatc catcgcctgc ggcaacgcga
      481 atgttagtga ggcagctaaa tcaacttgcc ttgaattgct aaacgcagtt ggcgccgcca
      541 gttggatcgc tgatgaaagt cttattgatg ccgtaacggc ggtatcaggc tctggcccgg
      601 cttacgtttt cttacttgct gaaaccatga cccaggccgg tattgaggct ggcctaagtc
      661 cggaaatagc cagtcttctc gctgtccata cggtggcggg atcaggcgaa ttactggttc
      721 agtctgacag cgatgccgag acgttacgca aaaatgtctc aagtcccggc ggcaccactg
      781 aagcggctct ttcaattttg ataggcgaga acggtatgca ggagctgatg agcaaagcta
      841 tcgctaaagc ggtggagcgt tctaaagaat tggctggtta ataggatagt tgttgcgagt
      901 cgttgcaaat ccgattcccg gcacctgatt cgcaggcatt cgcaactaga acctggctac
      961 agcgacgtaa cactccaaaa actggcaggg taattaccgt tagctagtta tttcagaaac
     1021 aattgatgcc cacggagcgc cggctcaagt aaatcttgca gtgctttaag agcccgcgct
     1081 tcaagctggc gtacccgatc tttcgataaa ttgagttctt ttccgatagc cgcgaaagtt
     1141 tgtttggcct cgctaaaata gcgatggcgg ataataaatt gttcacggtc aggcaaattg
     1201 gcgagcgcct tggcgatgat atcacttagc tgcaaacgtt caccttcagc cgccaatact
     1261 tcttct
//
LOCUS       DASCNL010000406         1458 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000851819, whole genome shotgun sequence.
ACCESSION   DASCNL010000406 DASCNL010000000
VERSION     DASCNL010000406.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000851819"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1458
                     /locus_tag="QF359_05565"
     CDS             <1..>1458
                     /locus_tag="QF359_05565"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO86409.1"
                     /translation="LEIGADDQEWNHESIEVQPAFQKLLDHMATYTPEWAAEECDVPA
                     ERIRKIADEYLAAASIGETIEIEGKTMPFRPVAVVLGKTVNNGWGAYHCCWARTMLLT
                     LVGALEVPGGTLGTNVKLNRPSDDRTKSANRNNDGFMKFPFNETTKEGWTKNPHIRNA
                     YKTLVPLVGDSPWSAALGPAHLPWLFQKEPPKNWPKPTKPDLWFCYKTNPAISSWNAP
                     EVAERVAEFPFTVAFAYTPDETNHMADIILPDSTDLESLQIIQLGSTKFVEQFWKDEG
                     YTIRQPVGDKVVDSMDMTDISTEIANRSGLLKEYNVAINKGAHGIRLQTGQFNYSIDE
                     DRPNTREEIWEQSALAASHGLSDGEEIHNLEWFKENGFMMKPYPEKKWFLYPHLKENS
                     IRFELPYQERILRHGTQLANRLHEIGVEWWDEQLKEYEPMPTYKPFPDIWSEHVMENG
                     GDPDDYPFIGLTSRSMQYSWGSNVGIPMINEVAQN"
BASE COUNT          397 a          386 c          359 g          316 t
ORIGIN      
        1 ccttgaaatc ggcgccgatg accaggaatg gaaccacgaa tccatagagg tccaaccggc
       61 gttccaaaaa ttgttggatc atatggccac ctatacgcct gaatgggctg ccgaagaatg
      121 cgacgtaccg gcagagcgta tccgtaagat tgccgacgaa tatctggccg ccgccagtat
      181 cggtgagacc atcgaaatcg aaggcaagac catgcccttt cgaccggtcg ccgtggtgct
      241 aggtaagact gttaataatg gctggggtgc ttaccattgt tgttgggcgc gcactatgct
      301 gctgaccttg gtgggggcgc tcgaagtacc tggtggcacc ctgggcacca acgttaaact
      361 gaaccggccg tctgacgaca ggacgaaatc cgccaaccgg aacaacgacg gttttatgaa
      421 gttccccttc aacgaaacca ccaaggaagg ctggacaaaa aatccccata tacggaacgc
      481 ctataagacc ttggtgccac tagtgggcga ctcaccctgg tcggctgcct tgggccctgc
      541 tcatttaccc tggctgtttc agaaagagcc gccgaaaaat tggcccaaac cgactaagcc
      601 cgatctctgg ttctgttata aaaccaatcc ggcaatctcg tcctggaatg caccggaagt
      661 agctgaacga gtagcggaat ttccctttac cgtagctttc gcctatacac cggacgaaac
      721 caaccacatg gcggacatca tcctgccgga ctccacggat ttggaaagtt tgcaaataat
      781 ccaattgggc agcactaaat tcgtcgagca gttttggaag gatgaaggct ataccatccg
      841 ccaaccggta ggcgacaaag ttgtcgacag tatggatatg accgatatct ctactgaaat
      901 cgccaaccgt tctggcttat tgaaagaata caatgtcgcc atcaacaaag gcgctcatgg
      961 cattcgattg cagacgggtc aattcaacta ctcgattgac gaagaccggc ccaatacccg
     1021 agaagaaatc tgggaacagt cggccttggc tgcgagccac ggactttcag acggtgagga
     1081 aatccataac cttgaatggt tcaaggaaaa cgggtttatg atgaaacctt atccagagaa
     1141 aaaatggttc ctctatcctc accttaagga aaatagcatc cgcttcgagc tgccctatca
     1201 ggaacgtatc ctgcgccatg gcactcaact ggccaatcgt ctgcatgaaa ttggcgtcga
     1261 atggtgggac gaacagctga aagaatacga acccatgcca acctataaac ctttccccga
     1321 catttggtca gaacatgtca tggaaaatgg tggcgatcct gacgattatc cttttatcgg
     1381 tctgacatcc cgctccatgc aatattcctg gggctccaac gtcggcattc ccatgatcaa
     1441 tgaagtggcg cagaatat
//
LOCUS       DASCNL010000407         3128 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000852763, whole genome shotgun sequence.
ACCESSION   DASCNL010000407 DASCNL010000000
VERSION     DASCNL010000407.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000852763"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(245..1054)
                     /locus_tag="QF359_05570"
     CDS             complement(245..1054)
                     /locus_tag="QF359_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HJO86410.1"
                     /translation="MPNHSATPLSHAACSVLMEPSVEAKISLTQEIADYWASGSIADI
                     GKAAPPDRPARPLRPELRPPRDMPKRNAQGDKGRITLIHAIEHIELNAIDLAWDIIAR
                     FTDYNLPRDFYDDWVGVAVDEARHFDLLNVYLSDHDSAYGDFPAHDGLWQAAEDTAGD
                     LLARLAIVPMVLEARGLDTTPPTIAKLRDVGDDQAADILTTIVDEEIAHVAAGVRWFN
                     YLCARQNKAPAKTYQTLVKKYFKGQIKPPFATAAREQAGFSAEYYQPIAVG"
     gene            1142..1774
                     /locus_tag="QF359_05575"
     CDS             1142..1774
                     /locus_tag="QF359_05575"
                     /inference="COORDINATES: protein motif:HMM:NF024966.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJO86411.1"
                     /translation="MSNNDHYNLVADEHEIDRVLSAWAFARDCGDWDILSNCFQPDAE
                     INISWFSGAASEFIERSKCMLADFKPGEHGKHQIGRARIEVAGNRATSECHAELLRRV
                     VGDPFDFDALTWGRFFDLFEKREDGVWRIFRRTMVYEKDRMDPVNPADVPPGYFEAMD
                     LSQYPPACQILCFRLSLIGRAPMDNIIQAGSDGEARLKKDAKSWLNGKSV"
     gene            complement(1771..>3128)
                     /locus_tag="QF359_05580"
     CDS             complement(1771..>3128)
                     /locus_tag="QF359_05580"
                     /inference="COORDINATES: protein motif:HMM:NF015655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86412.1"
                     /translation="LKAFSETPEPDIAFRKFDDFLAALPAGIQLFSMFHAHPTLLNLV
                     AEIMGSAPRLAEHLGRNPGVLDSVLQEDFFERLPDADQMDEELGHVLQRSENIEDVLD
                     NVRRWANDKRLQIGVQALRHHSNWQDFGIAYSNIADISIQHLLKQVSNEFELNYGRVK
                     DSEWAVLALGKVGGREMTPSSDLDLIFVYRHDENIEQSDGERPLHPSQYFARLSQRLI
                     NAITAPTPEGTLYEVDMRLRPSGNAGPIASHFSTFVQYHKEKSRTWEHMALSRARIVC
                     GTPSLTTDIKAVISETLTQEREPASLLTDVAEMRERIDKEHHSDFIWEVKYIRGGLVD
                     IEFSVQYLQLKHAHQHPDILSANTSLAIQNLRAKELLDGHQADTLADALNLWQTVQGM
                     LRLTIEGYFQPEREHEVPRALAQALAEAGGGSDIDALKNHMKQTANAVYQVYHDLIGE
                     P"
BASE COUNT          759 a          741 c          822 g          806 t
ORIGIN      
        1 cggctagtta ttcatttaaa tgttgtctat taagttcatt tcaccacaca tcataggcga
       61 tgtcgcagag aaaaagggtt cccagatgtt tctgatggaa atgttatcga tatttggtgt
      121 gatgtccgtt gtgggtcaac agcagccatt tggaggacta gcaaatttcg tccgctttcg
      181 gtggcagagc agaaattggt ggcaatttcg aagtcaccgg gtgtcggtgc tgtgagaacg
      241 ggtttcaacc caccgcaatt ggctggtaat actcagcgct aaagccggct tgttcacggg
      301 cggcggtggc aaagggcggt ttaatctgac ctttaaaata ttttttcacc agcgtttgat
      361 aggtttttgc cggtgcttta ttttgccgtg cacaaagata gttgaaccag cgtacaccag
      421 ccgcaacatg ggcgatttct tcatccacta tagtggtcaa aatgtccgcc gcttggtcgt
      481 caccgacgtc gcgcagttta gcgatggtcg gtggagtcgt atccagccca cgcgcttcca
      541 acaccatagg tacaattgcc agtcttgcca gtaaatcacc ggcggtatcc tcagccgcct
      601 gccacaaccc gtcatgggct gggaaatcgc cgtaagcgct atcatgatcc gataaataaa
      661 cattgagcag atcaaaatgc cgggcttcat cgacggcaac accgacccag tcatcataaa
      721 aatcgcgggg caaattataa tcggtaaagc gggcgatgat gtcccaggca agatcgatcg
      781 cgtttaactc gatatgctca atcgcatgga tcaatgtgat tcgtccttta tcaccctggg
      841 cgttacgttt tggcatatca cgcggtgggc gtagctctgg ccgcagaggt ctcgcagggc
      901 gatctggcgg ggccgcctta ccgatatcag caatcgaacc gctcgcccaa taatccgcaa
      961 tctcttgggt gagagatatt ttagcctcaa cagacggttc catcaaaacc gagcaagcag
     1021 cgtggcttag tggagtggct gaatgatttg gcacctggac ttcctgttca acacatctaa
     1081 actgaggttc tcatattcga agaacggtag tacgtctaga ataattatcg agggattctt
     1141 gatgagcaat aatgaccact acaatctagt ggctgatgag catgaaatcg atcgagtgct
     1201 gtccgcgtgg gcattcgccc gcgattgtgg cgattgggac atattgagca actgctttca
     1261 accggatgcg gagatcaata tctcgtggtt ctcaggggcg gcgagtgaat ttattgagcg
     1321 ttcaaaatgt atgctcgctg attttaagcc gggtgaacat ggcaagcatc agattggccg
     1381 ggcacgcata gaggtcgccg gtaatcgtgc gaccagtgaa tgtcatgctg agttgctgcg
     1441 ccgcgtcgtt ggtgacccct ttgattttga cgccttaacc tggggccggt tttttgatct
     1501 gtttgaaaaa cgcgaggacg gcgtatggcg cattttccgc cgtaccatgg tttatgaaaa
     1561 agaccgcatg gatccagtta atccggctga cgtgccgccg ggttattttg aggcgatgga
     1621 tctttcccaa tatccaccag cttgtcagat actttgcttc cggcttagcc tgatcggccg
     1681 cgcgccaatg gacaatatca ttcaagctgg cagcgatgga gaagcacggc taaaaaaaga
     1741 tgccaagagc tggctgaatg gaaaaagcgt ttaaggctcg ccaatcagat cgtggtaaac
     1801 ttgataaaca gcattcgcag tttgtttcat atgatttttt agagcatcaa tatcggaacc
     1861 gccgcctgcc tctgccagtg cttgagcgag tgcccgtggc acctcatgtt cacgctcggg
     1921 ctggaaatag ccttcgatgg tcagacgtaa catgccttgg accgtttgcc acagattcaa
     1981 tgcgtcagct aacgtgtcgg cttgatggcc gtccaacaat tcttttgccc gcagattttg
     2041 gatcgccagg ctggtattgg cagataaaat atccggatgt tgatgggcat gtttgagctg
     2101 cagatattgg acgctaaatt cgatatcaac caagccaccg cgtatatatt ttacttccca
     2161 gatgaaatcc gaatggtgtt ctttgtcgat gcgctcgcgc atttcagcga catctgtcaa
     2221 aagagatgct ggctcgcgtt cttgagtaag ggtttcgcta ataactgctt taatgtcggt
     2281 ggtgagagat ggcgtgccgc acacgatacg tgcccgtgat aaggccatgt gttcccaggt
     2341 cctggatttc tccttgtgat attgaacgaa agttgaaaag tgtgaggcaa tgggcccggc
     2401 attgccggac gggcgtaaac gcatatcaac ttcataaagg gtgccctcgg gcgttggcgc
     2461 cgtgatagca ttgatcaggc gctggctgag ccgggcgaaa tactgactgg gatgcagcgg
     2521 gcgttcgcca tccgattgtt cgatgttttc atcgtggcga taaacaaaga ttagatcgag
     2581 atcggaagaa ggggtcatct cgcgaccgcc aactttaccg agcgccagga ccgcccactc
     2641 actgtctttt acccggccat aatttaactc aaattcgttg ctgacttgct taagcagatg
     2701 ctggatagaa atatcggcga tattgctata ggcaatgcca aaatcttgcc agtttgagtg
     2761 atgccgtaac gcttgaacac caatctgcaa ccttttgtca ttagcccagc gccggacatt
     2821 atcaagcaca tcttcaatat tttctgatcg ctggaggacg tggccaagtt cttcatccat
     2881 ttgatcggca tctggcaagc gttcaaaaaa atcttcctgt aagacgctgt ctaaaacgcc
     2941 ggggttgcgg cctaaatgtt cagccagcct gggcgcgcta cccattattt cggctaccag
     3001 attgagcaac gtcggatggg catgaaacat cgaaaacagt tgaatgcccg cgggcaaagc
     3061 agctaaaaaa tcatcgaatt ttctaaaggc gatatctggt tctggtgttt cgctgaaagc
     3121 cttaagga
//
LOCUS       DASCNL010000408         1881 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000852816, whole genome shotgun sequence.
ACCESSION   DASCNL010000408 DASCNL010000000
VERSION     DASCNL010000408.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000852816"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="QF359_05585"
     CDS             complement(<1..489)
                     /locus_tag="QF359_05585"
                     /inference="COORDINATES: protein motif:HMM:NF012673.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HJO86413.1"
                     /translation="MSFNIEEVLEIVEEAGQLALLYYGKVSRTLKSDMTIVTEADEAI
                     ENFLKVSLTALAPDYGFIGEETEENKEPANGETRSWVVDALDGTMAFAAGISIWTPAV
                     HIVDGSKPIAGACINPVTDELFWADEEGGAYCNGAPLQVNPSTSLERNSIIIGPTNHH
                     QLY"
     gene            complement(502..>1881)
                     /locus_tag="QF359_05590"
     CDS             complement(502..>1881)
                     /locus_tag="QF359_05590"
                     /inference="COORDINATES: protein motif:HMM:NF012609.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-utilizing enzyme"
                     /protein_id="HJO86414.1"
                     /translation="WDEYYNGYIDEIIANIKALDLDNSENLSIADLLDHVQKAEQMNR
                     RAWEIHFILMYPADALYLEFEAYCLEMGLEEKDFVTMLKGFESMPSKTDEELWNLSIA
                     AEEKGLNDIFLNEPAENLLAVLEGTPKAKEWLERLGNFLDTYGNRISAAHLDVLFPTW
                     KEDPTPVLDTLKSYFPRRESGWDFFEARQTVNDQREDAIKACKAKINKDDLPHFERFL
                     KAAQKIYAYQEDHGFYIDQGCTAALHDSLMTAGRRLENLGLIEDAADIFYLNFGELVE
                     ILGDLALDEKIGVYHYQLLIKPLIEERKEDWRKAPDLDAPLTVGAVPETMTDPIAIKV
                     FGIIDEVLHPKGEKKVVERMEGFPGAPGSIEGPARVIMNFEDFPKLQSGEILVCPYTG
                     TAWTPLFLKIGDVVTDTGGMLTHAAIAAREYGIPAVVGTWTATNSIRNGDIIRLDGDN
                     GVVEIIKRI"
BASE COUNT          442 a          489 c          449 g          501 t
ORIGIN      
        1 gtagagttga tgatgattgg ttggcccgat gataatactg ttgcgctcca ggctggtcga
       61 tgggttgacc tgcaaaggag cgccgttgca ataggcgccg ccttcttcat cagcccagaa
      121 taattcgtcg gtcacaggat tgatgcaggc gccggcgatc ggtttgctgc catcgacaat
      181 atggactgcc ggcgtccaga ttgatattcc ggcggcgaac gccatggttc cgtccagggc
      241 gtccaccacc caggaacgcg tctcaccatt tgcgggttct ttgttttctt ctgtttcctc
      301 accaataaaa ccgtaatcgg gtgccagcgc ggtcaatgac actttgagga agttttcgat
      361 ggcttcatcg gcttcggtaa caattgtcat atcggacttc aacgtacgcg atactttacc
      421 gtaatagagc aaggcaagct ggccggcttc ttcgacgatc tctagcactt cttcaatatt
      481 aaatgacatc gtaactttac cttatatgcg cttgatgatt tcgaccacac cgttgtcgcc
      541 atccagacgg atgatatcgc cgttgcggat ggagttggta gcggtccagg ttcccacaac
      601 tgccggaata ccgtattcgc gagcggcgat ggccgcatgg gtcaacatac cgccagtatc
      661 ggtcaccaca tcgccgatct tcaggaacaa tggtgtccag gccgtgcccg tatacgggca
      721 aacgagaatt tctcccgatt gcagttttgg aaaatcttca aaattcatga tcacccgcgc
      781 cggaccctca atcgatcccg gagcgcctgg gaaaccttcc atccgttcga cgaccttctt
      841 ttcgcccttg ggatgcaaga cttcatcgat aatgccaaac acctttatag cgatgggatc
      901 agtcatggtt tccgggacgg cgccaacggt aagcggcgcg tccaaatccg gcgctttacg
      961 ccaatcctcc ttacgttctt cgatgagagg tttgatcaaa agctgataat gatagacgcc
     1021 aatcttttcg tccaatgcca agtcgccaag aatttctacg agttcaccga aatttaaata
     1081 aaagatatcg gcggcgtctt caatgagccc cagattttcc aggcgacgcc cagcggtcat
     1141 gagtgaatcg tgaagcgctg ccgtgcagcc ttgatcgatg taaaaaccgt gatcttcttg
     1201 ataagcataa attttttgcg ccgccttcaa aaagcgctcg aaatgcggca ggtcatcttt
     1261 gtttattttc gccttgcagg ctttgatagc gtcttctctt tgatcattaa cagtttgacg
     1321 tgcctcgaag aagtcccaac cactttcacg gcgcgggaag taacttttga gcgtgtccaa
     1381 aaccggtgtt gggtcctctt tccaagtagg aaacagcaca tccagatgag cggcgctgat
     1441 tcggttgccg tacgtatcga gaaaattgcc aagacgctcc aaccattctt ttgctttcgg
     1501 cgttccttcc agaaccgcta gtaaattttc cgccggttcg ttgaggaaaa tatcattgag
     1561 acctttttcc tccgcggcga ttgacaaatt ccacaattcc tcgtcggttt tcgacggcat
     1621 gctttcgaaa cctttgagca tggtgacaaa atctttttct tcaagcccca tttccaggca
     1681 gtaagcctca aattcaagat acaacgcatc agcgggatac atcaggataa aatgaatttc
     1741 ccaagctcgg cggttcattt gctcggcctt ttgcacatga tcaagcaaat cggcgatgga
     1801 gagattttcg gagttgtcca gatcaagcgc tttgatgttg gcgatgattt catcgatata
     1861 gccgttgtaa tattcgtccc a
//
LOCUS       DASCNL010000409         1364 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000853638, whole genome shotgun sequence.
ACCESSION   DASCNL010000409 DASCNL010000000
VERSION     DASCNL010000409.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1364)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1364)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000853638"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1358)
                     /locus_tag="QF359_05595"
     CDS             complement(<1..1358)
                     /locus_tag="QF359_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HJO86415.1"
                     /translation="MLDQVQTEQLDFAKLQSLVPEEYALHWQVTLKFLEILTEYWPDI
                     LADKGLVDPAERRNAVMQAQLAHWQNQPPQKPIIAAGSTGSIPATAELLTLIARLPEG
                     VVVLPGLDQNINPVSLEAQESHPQHGMFRLLAKMALSPEDIQTWQSGDIDGASPERRE
                     LVFNVMRPVGNFNEWRELDPQPKAALEGIEYIKCPGPDEEAGVIALKLREALETEGKT
                     AALVTPDRRIARRVASELRRWDIEIDDSAGLPLAQTPPGSFLRLTAELVAHHYLPLNL
                     LAIGKHPLATGGMAPAPFRQLIRDIEVSVLRGPRPASGLAALIDLVPEEQANMKELLE
                     TIGLMATDFTAAMAGSKIILGELLKTHIAFMEALATSDEQSGRTRLWSGDDGEATAGF
                     VAELMEVSNVLGEIEPVSYPALLDVLMTGRAVRPSFGSHPRLMILGLLEARLQHADLI
                     VLG"
BASE COUNT          321 a          393 c          345 g          305 t
ORIGIN      
        1 cccaaaacaa tcagatcggc gtgttgcagg cgggcttcca gcaggcccaa aatcatcaaa
       61 cggggatgac tgccaaagct cggacggaca gcgcggccgg tcatcagcac atcgagaagc
      121 gccgggtagg aaacgggctc gatctcacct agaacgttgc ttacttccat caattcggcg
      181 acaaaacctg ccgtggcctc accatcatct cccgaccaaa ggcgggtgcg gccagattgt
      241 tcatcagatg ttgcgagcgc ttccataaag gcgatgtggg tttttaatag ctcaccgagt
      301 ataatctttg agcctgccat ggccgccgta aaatcagttg ccattaaccc gatcgtctca
      361 agcagttctt tcatattagc ttgttcttcc gggacgagat caatcaatgc cgccaatcca
      421 gatgccggtc gcggtccccg tagcacgctc acttctatat cacgaataag ctgacggaat
      481 ggggcgggtg ccatgccgcc agtggccagg ggatgtttgc cgattgccaa taaattcagc
      541 ggcagataat gatgcgccac caattcagcc gtcagccgca aaaatgaacc cggaggcgtt
      601 tgtgccaagg gtaaacctgc tgaatcatcg atctcgatat cccagcggcg aagttcactg
      661 gcgacccgcc gggcgatccg gcgatccggc gtcaccaagg ctgcggtctt accttcagtc
      721 tctaaggcct cacgcaattt gagtgcgata acgccagctt cctcatccgg gccagggcat
      781 ttgatatact caataccctc aagcgccgcc ttaggctgtg ggtctaactc ccgccattca
      841 ttgaagttac ccaccgggcg cataacatta aagacaagtt cacggcgttc cggagacgcg
      901 ccatctatat caccactttg ccaagtttgg atatcttcag gggacaatgc catttttgcc
      961 aataagcgga acataccgtg ctgcggatgg ctttcctgag cctcgagcga taccggattg
     1021 atattttgat ccaatccagg cagaacaacc accccttccg gcagcctggc aatgagcgtt
     1081 agcaattccg ctgtcgccgg aatactgccg gtcgaaccgg cagcaatgat cggtttttgc
     1141 ggtggctggt tctgccaatg ggcaagctgt gcctgcatca ctgcattgcg gcgctcggcc
     1201 ggatcaacca gacctttatc ggccaaaata tccggccaat attcggtcaa aatctccaag
     1261 aattttaacg tcacctgcca atgcagcgcg tattcttccg gcactagaga ttgcaatttg
     1321 gcgaaatcaa gctgctcggt ctgtacttgg tcgagcaatc tgcc
//
LOCUS       DASCNL010000410         5111 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000854526, whole genome shotgun sequence.
ACCESSION   DASCNL010000410 DASCNL010000000
VERSION     DASCNL010000410.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5111)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5111)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5111
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000854526"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..557
                     /locus_tag="QF359_05600"
     CDS             <1..557
                     /locus_tag="QF359_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MOFRL family protein"
                     /protein_id="HJO86416.1"
                     /translation="DETPKPGDEIFTNNKVEIIASGRNSLEAAAKGAQEAGITPIILN
                     DSLEGEASEVGRTMAENIGEYREQAPCVLLSGGELTVTVAGSGRGGPNTEFLMGLAAG
                     LKGADGVYAISCDTDGTDGLVDNAGAIITPDTLQRAEDAGLDLETRLADNDAYNFFAA
                     LDDLVVSGPTHTNVNDFRAILITE"
     gene            complement(565..1503)
                     /locus_tag="QF359_05605"
     CDS             complement(565..1503)
                     /locus_tag="QF359_05605"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO86417.1"
                     /translation="MSIPDSKPYQIRLGGYGPPTTSFSRSLKMIGDLMEEQFGSDVDI
                     KYVYNIMDLGFKGEDILWLTEHGLLTISYQSSSYLTDRVPELGFVDLPFLFENNEQAR
                     VAIDGTLGQYLSEKTEERINYKILGYFENGFRQISNKLRPIRRPADFDGMSIRVLPSD
                     VQARTFELLGATPKRMDLTEAIEGIVDGSLDAQENPFANTVTYGAHKYHRYHTASNHF
                     YISRSIMCHRDSYSSWPEEIQIALQESVRDTITWQRGQAEQEAVVSRQAIEDEGCEIV
                     ELTPEEHAEFVQAVKPQHDDAREVFGDKMFELMKQT"
     gene            1627..3414
                     /gene="asnB"
                     /locus_tag="QF359_05610"
     CDS             1627..3414
                     /gene="asnB"
                     /locus_tag="QF359_05610"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HJO86418.1"
                     /translation="MCGLTAIFSYGDNAPNVDEAELLRMREVMIARGPDGAGSWISGD
                     QHVGLAHRRLAIIDIGPTGAQPMALTDDAGNIRLQITYNGEIYNFKQLRAGLIAEGRK
                     FSTQSDTEVLLHLYDRDGVDMLRQLRGMFAFALWDEARQGLLLARDPYGIKPLYYADD
                     GGTLRVASQVKALQTGGAISSTPNPAGHVGFFTLGYVPEPHTMYKDIQSLPAGSSLWI
                     DKAGARTENRYFNLTREMAELEANGQQGSAEELRAALTESIEHHLVSDVPVGVFLSAG
                     LDSASIMALTSEVAGRQMETMTLRFDEFSDGPLDEAPLAAEIATFCDTRHQTRTVKGS
                     DFHTDKKKLLAAMDQPSIDGVNTYFVAKEAADMGLKVALSGLGGDELFGGYDSFRQIP
                     SLVSRLGWVPGIRVLGAGFRVLSGSLLRHLTSPKYASLFEYSADYGSAYLLRRGLFLP
                     WELPQFLDTDLVRDGWRDLNLFNNLNLTVTGIINPINKVSLLESAWYMRNQLLRDSDW
                     AGMAHSLEIRTPLVDATLFTKLAACGYNKIDMARSPATALPENVLNRPKTGFYIPVRE
                     WLQGEEQEAGAERGGRGWAKSIYQETYAA"
     gene            3494..4699
                     /locus_tag="QF359_05615"
     CDS             3494..4699
                     /locus_tag="QF359_05615"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HJO86419.1"
                     /translation="MSFTAQIPYGAYWSTPFAKWQGTLSHLHSIKFGAHVAKAELAKR
                     DISPEAFDYATLGLTVPQHQSFHGLPWFTGLIGAPDVGGPTISQVCATGVRCILDATQ
                     SVEAEMSGVALVATVDRVSNGPQLYYPAPSGIGGTGAHENLTVDNMQCDALGGHSMLQ
                     TAENVAKKSQITTEEQHEIVLLRQEQYQMALADDSAFLKKFMTLPFDVPSANFKKTVG
                     TMDGDEGVFKSNPEKLASLKPVLPEGTVTYGGQTHPTDGNACMIVTTPEKAAEFSSDK
                     NIVVKIKGFGMARAANGYMPEAPVPAVHRALESAGLKLDDIEAIKTHNPFAVNDAYFV
                     KETGYDINKMNNYGCTLVWGHPQAPMGVRGVIELIEEMVIKGGGNAMFTGCAAGDTGM
                     AIVIEVGDK"
     gene            4717..>5111
                     /locus_tag="QF359_05620"
     CDS             4717..>5111
                     /locus_tag="QF359_05620"
                     /inference="COORDINATES: protein motif:HMM:NF012935.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HJO86420.1"
                     /translation="MKSGAPSFDYIIIGAGSAGCVLANRLSENPDQRVLLIEAGPADR
                     DPMIKIPLVWLKFVQNRRHDWGYDTRPEPHMDNREIECVRGKVLGGCSSINAMTYVRG
                     NPGDFERWKKTGLDHWGYDDVLPYFKRGE"
BASE COUNT         1224 a         1208 c         1383 g         1296 t
ORIGIN      
        1 ccgatgaaac acccaaaccg ggcgatgaaa tttttacaaa taataaagtg gaaataatcg
       61 ccagtggccg aaactcctta gaggcagccg ccaagggtgc tcaagaggcc ggcatcacac
      121 cgattattct aaacgacagt ctagagggcg aggcgagcga ggttggccgc acaatggctg
      181 aaaacatcgg cgagtatcga gagcaggcgc catgtgtctt gttgtccggc ggtgagttga
      241 ccgtgactgt tgccggtagc ggtaggggag ggccgaatac ggaatttctg atgggtttgg
      301 cggccgggct taagggtgct gacggtgttt atgcgatttc gtgtgatacc gatggcaccg
      361 atgggctagt tgacaatgcg ggtgcgataa tcacgccgga tacattgcaa cgtgctgaag
      421 atgctgggct cgatcttgaa accaggctcg ccgacaatga cgcctataat ttttttgctg
      481 ctctcgatga tttagtcgtt agcggtccga cgcacactaa tgtcaacgat ttccgggcaa
      541 tattgataac tgaataagtt gaggctaagt ctgcttcatc agttcgaaca ttttgtcgcc
      601 gaagacttcc ctggcgtcat catgctgggg tttgacggct tgaacgaatt cagcatgttc
      661 ttccggcgtc agttcgacaa tttcgcatcc ttcgtcttca attgcttggc gtgacacgac
      721 ggcctcttgt tcggcttggc cgcgttgcca agtgatggta tctcgcaccg attcttgcaa
      781 cgcgatctgg atttcttccg gccagcttga atagctatct cgatggcaca tgatactgcg
      841 tgaaatataa aagtggttcg aggccgtgtg gtaacggtga tacttatggg cgccataggt
      901 gaccgtattg gcaaaagggt tttcctgcgc atccaaggaa ccgtcgacaa taccttcgat
      961 cgcttcggtg agatccatgc gttttggcgt tgcacctaaa agttcaaatg ttcgcgcctg
     1021 aacatcgctc ggcagcacac gaatgctcat gccgtcaaaa tcggcaggcc tgcggattgg
     1081 ccgcagcttg ttggaaattt gccgaaaacc attttcgaag taaccgagaa ttttgtagtt
     1141 gatgcgctct tcagtttttt ctgacaaata ttggccgagc gtgccatcaa tcgccacccg
     1201 cgcctgttcg ttattttcaa acaagaatgg caaatcgaca aatccaagtt ccggtacgcg
     1261 gtcggtcaga taactggagg attggtaaga aatagtcaaa agaccgtgct cggtcagcca
     1321 caggatatcc tcacccttaa agcccaaatc catgatgttg tagacatatt taatatcgac
     1381 atcactgccg aactgctctt ccatgaggtc gccaatcatt ttaagcgacc ggctgaaaga
     1441 tgtggtcggc gggccatagc ctccgaggcg gatttgataa ggtttactat cgggtatact
     1501 caatagaaat tccccatttt cacaaatttg ctgaataaaa tcagaccata acgaatgagc
     1561 tgctttatag ccatcttaat aaatgccttt taggatttgc cgttcctcgc tatgtagagt
     1621 gtcattatgt gcggtttaac ggcaattttt agttacggcg ataatgcgcc aaatgttgat
     1681 gaagctgagc tgctcaggat gcgcgaagtc atgattgccc gcgggccgga tggtgcgggc
     1741 agttggattt ctggcgacca acacgttggc ctggcgcatc gccgcctggc aatcattgat
     1801 atcgggccaa ccggggcgca accgatggcg ctgaccgatg atgcgggtaa tatacgtttg
     1861 cagattacct ataacggcga gatatataac tttaaacagt tgcgcgctgg gttgatagct
     1921 gaaggccgta aattttctac ccaatcagat accgaagttc tgttgcacct ttatgaccgg
     1981 gacggtgtgg acatgctgcg tcagctgcgt ggcatgtttg ctttcgcact ttgggatgaa
     2041 gccagacaag gcctactgct ggcccgcgat ccttacggta ttaagccgct ctattatgcg
     2101 gatgacggtg gcacgttgcg cgttgcctcg caagtaaaag ctttgcagac gggtggcgcg
     2161 atttcgagca cgcccaaccc ggctggccat gtcggcttct ttactctcgg ctatgttcct
     2221 gaaccccaca ccatgtataa agacattcaa agcctgccgg cagggtccag cctgtggatt
     2281 gataaagcag gtgccaggac cgaaaatagg tatttcaatc taacccggga aatggccgag
     2341 cttgaggcaa atggtcagca gggctcagcc gaagaattgc gagcggcctt aactgagagc
     2401 attgaacatc atttggtttc agatgtgccg gttggcgtat ttctatcggc gggtttggat
     2461 tcagcaagca tcatggcgct gacctccgaa gtggccggta gacaaatgga gacgatgacg
     2521 ctgcgcttcg atgagttttc cgatgggccc ttggatgagg caccgctcgc tgctgagatt
     2581 gccaccttct gcgacacccg tcaccaaacg cgcaccgtca agggtagcga ttttcacacc
     2641 gataagaaaa agctattggc ggcgatggat caaccatcca tcgatggcgt aaacacttat
     2701 ttcgtcgcca aggaagcagc cgatatgggg ttaaaagttg ctttgtcggg tttgggcggg
     2761 gatgagttgt ttggcggcta tgattccttt cggcaaattc cgtcactggt aagcaggctc
     2821 ggctgggtac caggtatcag ggttttgggt gcaggttttc gtgtgttgag cggctccttg
     2881 ttgcggcatt taacctcacc caaatatgct tctctgtttg aatattcagc cgattatggt
     2941 tcggcctatt tgttgcggcg cggattgttt ctgccctggg agctacccca atttctggat
     3001 acggatttgg tgcgcgacgg ctggcgggat ctgaatttat ttaataacct caacctgacg
     3061 gtaactggga ttataaaccc tatcaataaa gtctcgcttc tggaaagtgc ctggtatatg
     3121 cggaatcaac tgctcagaga ttcagattgg gccggtatgg cgcattcatt ggaaattcgt
     3181 actcctttgg ttgacgctac tctatttacc aagctcgcgg cgtgcggata caataaaatt
     3241 gatatggcgc gaagcccagc aacagcactg ccggaaaatg ttttaaatcg gcctaaaacc
     3301 ggattttata ttcccgtgcg cgaatggctc cagggtgaag agcaagaagc cggtgccgaa
     3361 cgcggcggtc gcggctgggc aaaatccatt tatcaggaga cctacgcggc ttaattggaa
     3421 catcaaatgt gattgtttgt aagccggaca agctttatct ttaagaaaaa cttacagcac
     3481 caggataatc tcaatgtctt ttaccgcaca aatcccctat ggggcttatt ggtcaacgcc
     3541 ttttgccaaa tggcagggca ccttatctca tctccacagt ataaaatttg gcgcccatgt
     3601 cgctaaagcc gagctcgcca aacgtgatat cagcccggaa gcttttgact acgcgacact
     3661 cggtcttacc gtgccgcagc accaatcctt tcacggtttg ccttggttca ctggcttgat
     3721 cggtgcgccg gatgtcggtg gcccgacaat ttcgcaagtt tgtgcgaccg gcgtgcgctg
     3781 tattttggat gcgacgcaat ctgttgaggc tgaaatgtct ggtgtggcac tcgtcgctac
     3841 ggttgatcgg gtttccaatg gtccgcagct ttattatccg gcaccttcgg ggattggcgg
     3901 tacaggggct catgaaaatc tcactgtcga taacatgcaa tgcgatgcac tcggcggcca
     3961 ctcgatgttg caaacagccg aaaacgttgc caagaaaagc caaatcacca ctgaagagca
     4021 gcatgaaatt gtgctgctac gccaggaaca gtatcaaatg gcgctggctg acgattctgc
     4081 ttttttgaaa aaatttatga ctttgccgtt cgatgtgcca tcagcgaatt ttaaaaaaac
     4141 cgtgggtaca atggacggtg acgaaggcgt ctttaaatcc aatccggaaa aacttgcctc
     4201 cttgaaaccc gttttaccgg agggcacggt gacctatggc ggtcaaaccc atccaaccga
     4261 tggcaatgcc tgcatgattg tgacgacgcc ggaaaaagcc gctgaattta gcagcgacaa
     4321 aaatattgtg gtgaaaataa agggtttcgg catggcccgc gctgccaatg gctatatgcc
     4381 ggaagcgccg gtgcctgctg ttcatcgtgc gcttgaaagt gcaggtttga agctagatga
     4441 tattgaggcg atcaaaaccc acaatccatt cgccgtcaac gatgcctact ttgtcaaaga
     4501 aaccggctat gacatcaaca agatgaacaa ttacggctgc acgctggttt ggggtcatcc
     4561 acaggcgccg atgggtgttc gcggtgtcat tgagctgatc gaggagatgg tcatcaaagg
     4621 cggtggcaat gctatgttta ccggctgtgc tgcaggcgat actggcatgg ccatagttat
     4681 cgaagtcggc gataagtaaa tggtgggtgg tgattagtga aatcgggtgc gccatctttt
     4741 gactacatca tcattggtgc cggttctgcc ggttgcgtcc ttgccaatcg cttaagcgaa
     4801 aatccagatc aacgggtgct gttgattgaa gccggccccg ctgaccgtga tccgatgatc
     4861 aaaattccct tggtctggct aaagtttgtt caaaacaggc gtcatgactg gggctatgat
     4921 actcggccag aaccgcatat ggataaccgt gaaattgaat gcgtacgcgg caaagttctc
     4981 ggcggctgct cgtcaataaa tgcgatgacc tatgtgcgcg gcaatccggg tgattttgaa
     5041 cgctggaaga aaactggcct ggatcactgg ggctacgatg atgtattgcc ctatttcaaa
     5101 cgcggtgaaa g
//
LOCUS       DASCNL010000411         1875 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000857971, whole genome shotgun sequence.
ACCESSION   DASCNL010000411 DASCNL010000000
VERSION     DASCNL010000411.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000857971"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="QF359_05625"
     CDS             <1..739
                     /locus_tag="QF359_05625"
                     /inference="COORDINATES: protein motif:HMM:NF025091.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oxaloacetate decarboxylase"
                     /protein_id="HJO86421.1"
                     /translation="YTKLGRPDIGLITADELATIVGTIRERTNLPLIVDADTGFGNAL
                     NVQRTIKMLERNGASAIQIEDQSLPKRCGHLEGKTLVSVDEMKGKIKAALDARRDQGT
                     LIVARTDAIGVEGYDLAMERAVGMVEAGADVLFIEAFQNEEQIAGTVEEFGGKIPLLV
                     NMVEGGKTPMSPAHELQEKGFSIVIFPGGLVRTLAHAAEQYFNSLYQNGSTLEHLDHM
                     YDFAALNDLLDTEKMLEAGKKYSEGGD"
     gene            741..>1875
                     /locus_tag="QF359_05630"
     CDS             741..>1875
                     /locus_tag="QF359_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014753312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO86422.1"
                     /translation="MAQLDLVLLAVLKGRLEQIADEMDATLFRSAFNPIIAEAHDASH
                     GLYHAKTGETLIQGKSGLPVFVGAMSFAVKAVIDKVKAENIELLPGDVFIFNDPYEGG
                     THLSDFKLVRPFFRDGKLFCYLASVGHWHDVGGNVPGNYNPVATECYQEGMLIPPVYL
                     YREGVLNEDIVAILQSNSRLPGSLYGDLNGQVSALELGEQRLDDLLDEYGEDQVTNAL
                     AQLKQSAAKLMASYISDLPDGTYSAEDWLDNDGIIDEPLKVGLDVIIAGGKMTLDFSR
                     TSNACAGPVNISRSTCIASCYVALKHIFRDVPANSGVLEPIEFVIPEDSLLSVMRPKP
                     VGGYTETILRVIDVMFQVISKVAPDMTNGCAYGTINALSMAGYR"
BASE COUNT          464 a          481 c          491 g          439 t
ORIGIN      
        1 ctacacaaaa ttaggccggc ccgatatcgg gcttataacc gccgatgaac ttgccactat
       61 cgtcggcacc atccgcgaac gcacaaatct gccattgatc gtcgacgctg atacgggatt
      121 tggcaatgcc ctcaatgtcc agcgcacgat caaaatgctg gaacgaaacg gtgcatcggc
      181 cattcaaatt gaggatcaat cgctgccaaa acgttgcggt caccttgagg gaaaaacatt
      241 ggttagcgta gacgaaatga agggtaaaat taaggccgcc ctcgatgccc gccgggacca
      301 aggcaccttg atcgttgccc gcactgatgc catcggcgtt gaaggctatg atctggccat
      361 ggaacgcgcc gttggcatgg tcgaagcggg cgccgatgtt ttgtttatcg aggcttttca
      421 aaacgaagaa caaatcgccg gcacggttga agaatttggt ggcaagattc cgctgctggt
      481 caatatggtt gaaggcggca aaacaccgat gtcaccggcg catgagctgc aagaaaaagg
      541 cttctcaatc gtcatttttc caggcggttt ggtccgcacc ctggcgcacg ctgcagaaca
      601 atatttcaac tctctttacc aaaacggctc aactttggaa catttggatc acatgtatga
      661 ttttgccgcg ttaaacgatc tattagatac tgagaaaatg ctggaagccg gtaaaaaata
      721 cagcgaaggt ggagactaat atggcacagc ttgatctcgt tctgctggcc gtccttaaag
      781 gccgcctgga acaaatcgct gatgaaatgg acgcaacgct gttcagaagc gcctttaatc
      841 ctattatcgc cgaagcccat gacgccagcc acggccttta tcatgcgaaa accggcgaga
      901 cccttatcca aggtaaatcc ggcctgccgg tattcgtcgg tgccatgtcg tttgccgtca
      961 aagcggtgat cgataaagtc aaagctgaga acattgaatt gctgccgggt gatgtgttca
     1021 tctttaatga cccttacgaa ggcggcacgc atttatccga ttttaaattg gtgcggccgt
     1081 ttttccgcga cggcaaattg ttctgctatt tggcgtcggt cggtcactgg catgatgtcg
     1141 gcggtaacgt gcccggaaat tacaatccgg tcgccaccga atgctaccag gaaggcatgc
     1201 tgatcccacc agtttatctc taccgggaag gtgtgctcaa tgaggatatt gttgcgatat
     1261 tacagtcaaa ctcacgcctg cccggtagtc tctacggtga cttgaacggc caagtgagcg
     1321 cccttgaact gggcgagcaa aggctggatg atttgctgga tgaatacggc gaagatcaag
     1381 tcaccaacgc gctcgctcaa ttaaagcaaa gcgctgccaa actgatggcg agctatatca
     1441 gcgatctgcc ggacggcacc tattcggcgg aagactggct cgacaatgac ggcattattg
     1501 atgagccgct gaaagttggc ttggacgtga ttatcgctgg cggcaaaatg acgctggatt
     1561 tctcgcgcac gtcgaacgct tgcgccggcc cggtaaacat ttccagatca acttgcatcg
     1621 cctcctgcta tgtcgcgctc aaacatattt tccgtgatgt gccagccaat tcgggcgtgc
     1681 tggaaccaat tgagtttgtc atcccggaag acagcttact cagtgtcatg cggcccaaac
     1741 cggttggcgg ttataccgaa accattcttc gcgtcattga cgtcatgttc caggtgattt
     1801 ctaaggtggc acccgatatg accaacggct gcgcctatgg caccatcaat gcgttatcaa
     1861 tggcgggtta ccgca
//
LOCUS       DASCNL010000412         2798 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000864284, whole genome shotgun sequence.
ACCESSION   DASCNL010000412 DASCNL010000000
VERSION     DASCNL010000412.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000864284"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="QF359_05635"
     CDS             <1..273
                     /locus_tag="QF359_05635"
                     /inference="COORDINATES: protein motif:HMM:NF017828.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase family protein"
                     /protein_id="HJO86423.1"
                     /translation="DSMFNQAYTMREASKEFALDGVVYHPIKSCRTVSTGLADQRRYV
                     SEELGLPTLFFESDLMDPQVVSEAQMKNRADAFFEGLISRRQQAAV"
     gene            302..1474
                     /locus_tag="QF359_05640"
     CDS             302..1474
                     /locus_tag="QF359_05640"
                     /inference="COORDINATES: protein motif:HMM:NF017828.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase family protein"
                     /protein_id="HJO86424.1"
                     /translation="MNDKIRYFTEWEGKTLEQIFHLTRDLVEDPSYPTVAKWRENGGK
                     VLGHFQVYFPEEIAHAAGMLPVKIRGAQTDGTEAESRFGSYLCSIIKTSLDIALTKDI
                     ELDLFVTHPICDAARNLGAIWDRNFDYKGQILYLPQNPNSKFAQEYLGSEYQRLTRDI
                     EAASGNIVSPEALINSIEVFNKSRSLMRELYDIRNKSPWLIGADDSLVLISLAGFLPR
                     EEYNEFLETILDLIRARPVKKQDKMRVVFEGGFCETPPIDLLQTVARSCYVVDDDLFI
                     GLRYILDDVPTAGDPLDNLSHAYIENSTYSPVQHDLRKPKEKMLLERIKDADAEAVIL
                     AAAKMCEPGLEEQVAYSKELDEEHIPYFISEFEENQTSFDHLEIQLETFVENIMFD"
     gene            1502..2317
                     /locus_tag="QF359_05645"
     CDS             1502..2317
                     /locus_tag="QF359_05645"
                     /inference="COORDINATES: protein motif:HMM:TIGR00241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008047 - enzyme activator activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase"
                     /protein_id="HJO86425.1"
                     /translation="MKYSAGVDVGSTQTKAVIIDEEKNIVGRSLIDTGADVVKAAETS
                     YQIALDEMNVSDDDVGYVIGTGYGRYKVTFGDRQVTEISCHGRGAVHMFPDTKTVLDM
                     GGQDSKAIAVEPTGEIKDFSMNDKCAAGTGRFLGAASIALDIPLGDLGPVALNSDKPV
                     RISTTCTVFAEAEVLAWLGKGKSVEDILWGVHQSIAARTFGLLRRVGIHSELTFTGGV
                     AKNIGMIKAMEDKLDFKMNVSDDSHYMGALGAALFARDSLLAGEERKTQMEVA"
     gene            2320..>2798
                     /locus_tag="QF359_05650"
     CDS             2320..>2798
                     /locus_tag="QF359_05650"
                     /inference="COORDINATES: protein motif:HMM:NF013986.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008047 - enzyme activator activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase"
                     /protein_id="HJO86426.1"
                     /translation="MAFTIGLDIGSTYTKGLVLDSDHNIVGRAMKATGARLQEVAKAV
                     VGLTLEAAGVDKDAIDYCITTGYGRHMFDNRDLQVTDLTATARGCSFLFPETRTILDI
                     GGQTMKASKIDELRKVQTFRLNDKCASGTGMFLEKTVRYMGYETEDIGNLLDTAAEAV
                     "
BASE COUNT          721 a          679 c          742 g          656 t
ORIGIN      
        1 gactctatgt tcaatcaggc ctacacgatg cgcgaagcat ctaaagaatt tgctctcgat
       61 ggtgtggtct accacccgat taaaagctgc cggacagttt caaccgggct cgcggatcaa
      121 cggcgctatg tctcggagga attgggtctg cccaccttat tctttgaatc cgatttgatg
      181 gacccgcaag tggtctccga agcgcaaatg aaaaaccgcg ccgacgcctt ttttgaaggc
      241 ctcatttcgc gccgccagca ggccgcagtt taatccaaaa agcattactg aaagtacaat
      301 catgaacgat aaaattcgat attttactga atgggaaggc aaaaccctcg aacagatttt
      361 tcatttgact agggatctgg tcgaagaccc tagctacccg acggtcgcga agtggcggga
      421 aaatggtggt aaggtgctgg gccattttca ggtctatttc ccggaagaaa tagcccatgc
      481 agctggcatg ctgccggtta agatcagagg ggcgcagaca gacggcaccg aagcagaatc
      541 cagatttggc tcttatttat gctcaatcat caaaacctcg ctcgatatcg ccttgaccaa
      601 ggatatcgaa ctggatttgt tcgtgaccca tccgatttgc gatgcggcgc gcaatcttgg
      661 tgcaatttgg gatcggaatt tcgactacaa aggccagatt ttatatttgc cgcaaaatcc
      721 caattcaaaa tttgcgcaag aatatctcgg cagcgaatat cagcgcctga caagggatat
      781 tgaagctgca tcaggcaaca tagtcagccc ggaagccctc ataaactcga ttgaggtttt
      841 caataaatcg cggtcgttga tgagagaatt atatgacatt cgcaacaaat caccgtggtt
      901 gattggtgcc gatgattcgc tggttttaat ctcgctcgcc gggttcctgc cgcgtgaaga
      961 gtataacgag tttctcgaaa ccatattgga cttgatccgc gctcgtccag tcaagaaaca
     1021 ggataaaatg cgcgtcgtct tcgaaggtgg attctgtgag acgccgccaa tcgatctttt
     1081 gcaaaccgtc gcccgctcct gctatgtggt cgatgatgat ctgtttatcg gcctcagata
     1141 tattctcgat gacgtgccaa cagcgggcga tccgctcgac aatctgtcgc atgcctatat
     1201 cgaaaactca acctatagcc cggtacagca tgatttgcgc aagcccaagg aaaagatgct
     1261 gttggagcgg atcaaagacg ccgacgccga agcggttatt ctggctgcag ctaaaatgtg
     1321 cgagcccgga ctcgaagagc aggttgccta ttccaaagaa ctcgacgaag agcatatccc
     1381 ctacttcatc agcgagtttg aagaaaacca aacctcgttc gaccatttgg agatccaatt
     1441 agaaacattt gtcgaaaaca tcatgttcga ctgatgaccc gatgaaacag gagtaagaaa
     1501 tatgaaatac agtgcaggcg ttgatgttgg gtctactcaa accaaggctg tcattattga
     1561 tgaggaaaaa aatattgtcg gccggtcact gatcgatacc ggcgcggacg tggtcaaggc
     1621 ggctgaaacc tcctaccaga tcgcgctcga tgaaatgaat gttagcgatg atgatgtcgg
     1681 ctatgttatt ggcaccggct acggccgtta taaagtgacg ttcggtgacc gccaggtgac
     1741 tgagatcagc tgtcatggcc ggggtgccgt gcatatgttc cccgatacca aaaccgtgct
     1801 tgatatgggc ggccaggata gtaaagcaat tgccgttgag cccactggtg agatcaaaga
     1861 ctttagcatg aacgataaat gcgctgccgg tacaggccgg tttctgggcg cagcctcgat
     1921 tgccctcgat attccgttgg gcgatttagg gccagtggca ctgaactcgg acaaacctgt
     1981 ccgtatcagc acaacctgca cggttttcgc cgaagccgaa gtgctggctt ggctcggcaa
     2041 aggcaagtcc gtcgaagata ttctctgggg cgtgcatcaa tcgattgcgg ccaggacttt
     2101 tggcttgctg cgccgggttg gcatccatag tgagcttact tttaccggcg gggtagccaa
     2161 aaacatcggc atgattaaag cgatggaaga taagctcgat tttaaaatga acgtcagcga
     2221 tgattcccat tatatgggag cgcttggcgc ggcgctgttt gcccgcgata gcctgctggc
     2281 cggcgaagaa cggaaaaccc agatggaggt ggcataacca tggcatttac aattggattg
     2341 gatatcggct ccacctacac caaaggtctc gttttggata gtgaccacaa tatcgttggc
     2401 cgggcgatga aagcgaccgg tgcccggctg caggaagtgg ccaaagcggt tgttggcctg
     2461 accctcgaag cggctggagt tgataaagac gccatcgatt attgtatcac caccggctat
     2521 ggccgccata tgttcgataa ccgggatttg caggtgaccg atctgacggc aaccgcccgg
     2581 ggctgcagtt ttctgtttcc tgaaacccgg acaatcctcg atattggcgg gcaaactatg
     2641 aaagccagta aaatagatga gctcagaaaa gttcaaactt tccggcttaa tgacaaatgc
     2701 gcctccggta ccggcatgtt cttggaaaaa accgtgcgct atatgggcta cgagaccgag
     2761 gatatcggta atctgctcga taccgccgcc gaggcggt
//
LOCUS       DASCNL010000413         1128 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000867824, whole genome shotgun sequence.
ACCESSION   DASCNL010000413 DASCNL010000000
VERSION     DASCNL010000413.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1128)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1128)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000867824"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..806
                     /locus_tag="QF359_05655"
     CDS             <1..806
                     /locus_tag="QF359_05655"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO86427.1"
                     /translation="VKIVNNLGMHPFEIAFFRNVFGLIALIPFFLRIGFNELKTRRLK
                     MHLGRGCIHAASMITWFWALTVIPLADATALSFMVPVFASIGAIFIMHEPSQMSRWIS
                     IIIGFIGMIVILRPGFADISFGTWLVLGGTIFVATSKLMTKSLSRTESPSTIVAYMSF
                     TVTIISFVMASFVWTWPTLEMWLWFIALGGMGSIAHVMQVQSYKDGEITMVEPATFLR
                     LVWAALVGFVVFGEVPQIWSWIGGGIIMVGIFMLIRSEAKGSKPTAELL"
BASE COUNT          247 a          284 c          294 g          303 t
ORIGIN      
        1 tcgtcaagat cgtcaacaac ctcggcatgc acccgttcga gattgctttt ttccgcaatg
       61 tttttggact gatcgcactg atcccgtttt ttttgcggat cggctttaac gagctcaaaa
      121 ccaggcgttt aaaaatgcac cttggccggg gctgtatcca cgccgcgtca atgatcacct
      181 ggttttgggc tctgaccgtg atcccgctcg ccgatgccac ggcgcttagt tttatggtgc
      241 cggtttttgc ctcgattggc gcaatattta tcatgcacga gccgtcacag atgagccgtt
      301 ggatatccat catcatcggc tttatcggca tgatcgtaat attacgcccg ggttttgcag
      361 atataagctt cggcacctgg ctggtgctgg gcggcacaat ttttgtcgcc acttccaaac
      421 tgatgaccaa atcattgtca cgtaccgaaa gcccgtcgac tatcgtcgcc tatatgagct
      481 tcaccgtgac cattatttct ttcgtcatgg catctttcgt atggacctgg ccaacgcttg
      541 agatgtggct gtggtttatc gcccttggcg gcatgggcag tattgcccat gtcatgcagg
      601 tgcaatccta taaagacggc gagatcacca tggtcgaacc ggcaactttt ttacgcctgg
      661 tctgggcggc gctggtgggt ttcgtggtgt ttggtgaagt gccgcaaatt tggagctgga
      721 tcggcggcgg cataattatg gtcggtatat ttatgctaat cagaagcgaa gccaaaggca
      781 gtaaaccgac tgccgaactc ctctaggcgg gaactgcatc aatatcgtgc tcggcataca
      841 tcagaaggcc ggacacctgc tgataacgca acaacgcggt cggttttttt gattggcccg
      901 gacaaagcga tcaaggagat actggcctat ccaatgagca atggccgtaa ctttgacgaa
      961 atcttgcgct tgctagaatt ctgccagctg acagccgaac atcaggtggc gctgggatcg
     1021 aaagctgtgt taccttcatc gattgaaacg attagtcctg ctcgaatagt aacggaagac
     1081 gccaccgtat cggcttcatc catggtatgg attttaccgt tcagcagg
//
LOCUS       DASCNL010000414         1472 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000868100, whole genome shotgun sequence.
ACCESSION   DASCNL010000414 DASCNL010000000
VERSION     DASCNL010000414.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000868100"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            111..362
                     /locus_tag="QF359_05660"
     CDS             111..362
                     /locus_tag="QF359_05660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86428.1"
                     /translation="MSCNFGVVLSLDKPNLLALKYCAGEAACSIRAGINAHPIGLYIR
                     VTIYGVAMDDVFSVIYFRTQEGLPDPIEIHWNRILPEAV"
     gene            complement(502..>1472)
                     /locus_tag="QF359_05665"
     CDS             complement(502..>1472)
                     /locus_tag="QF359_05665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO86429.1"
                     /translation="LTDATRNIVNADAFAKMKDGVRIINCARGGLVVEADLKAAIESG
                     KVAGAAMDVFEEEPAKKNILFGMEQVIVTPHLGASTDEAQVNVAIQVAEQLSDYLLDG
                     TVVNAINMPSVSAEDAPKLAPYLKLAEQLDSFAGQATETAIKKVQIEYCGQASKLNTK
                     PLTAVVLKGLLSPLLESVNMVSAPTIAKERDIEISEVTCDTLDEFQTLITLTLTTESQ
                     TRTLSGTLFAGDKPRIVEIKGIAIDAELGPHMLFITNEDKPGLIGALGTLLGENKINI
                     ATFNLGRNEEGGDAISLIETDQPISDEIIEKVKTLNHVVRALPLRF"
BASE COUNT          351 a          374 c          339 g          408 t
ORIGIN      
        1 atcagcactc atgaccttat ggtctaacgc cgattataaa ccagaaaatc agataactca
       61 cgctgagatt ttgaacttgg ttagggatta tccggcagca ttgcccaatt atgtcttgta
      121 atttcggtgt ggtcctaagt ttggacaaac cgaacttgct tgctctcaaa tattgcgcag
      181 gtgaggcagc ctgttcgata cgcgccggta tcaatgccca tccgattggt ctgtatatcc
      241 gggtcactat ttatggagtg gccatggacg acgtattttc cgtgatttac ttcagaactc
      301 aagaagggct ccctgatcca attgagatcc attggaatag gattctgcct gaggcggtct
      361 gatgtccacc atgcgtcatg tgtggatata acgctggttt cccaataacg tccgctgtta
      421 aagatatacc agactttaac tcggcacttt ctcacaacca attattagag agtggctagg
      481 cggcagcctc ccctatttag tttaaaacct cagcggcagg gcccgtacca catggttcaa
      541 ggtttttacc ttttcgataa tttcatctga aattggctga tcggtttcaa tcagcgagat
      601 cgcatcaccg ccttcttcat tgcggcccaa attaaacgtc gcaatgttga ttttattttc
      661 accaagcaat gtacctagcg cgccaatcaa accgggtttg tcctcattag tgatgaacag
      721 catatgtggc ccaagttcag cgtcaatggc gatgcctttt atctcgacga tgcgcggttt
      781 atcgccggca aacagcgttc ccgacagcgt ccgggtttgc gattcggtcg ttagcgtcaa
      841 cgtaatcaac gtctgaaact catctaacgt atcgcaggtt acttccgaga tttcgatatc
      901 gcgttcctta gcaatcgttg gtgccgaaac catgttcacc gattccaaca gtggtgacag
      961 caggcctttg agcacgacgg ccgtcaatgg cttggtgtta agcttggaag cttggccgca
     1021 atattcgatt tggacttttt ttatcgccgt ttctgtagcc tgtccggcaa agctgtcaag
     1081 ctgttcagcg agtttcagat aaggtgccag tttcggtgca tcctcggcgc tgaccgacgg
     1141 catgttaatc gcgttaacga cggtgccatc tagtaaataa tcggacaatt gctcggcaac
     1201 ctgaatggcg acattgacct gcgcttcatc ggtcgaagca cccaaatgcg gcgttacaat
     1261 aacctgctcc atgccaaaca aaatattttt cttggcgggc tcttcttcaa agacgtccat
     1321 cgcagcaccg gcgactttgc cgctttcaat cgccgcttta agatcggctt caacaaccaa
     1381 gcctccccgg gcgcaattga tgatacggac gccatctttc attttggcaa atgcatcagc
     1441 attaacgata ttacgcgtcg catcagtcag gg
//
LOCUS       DASCNL010000415         1026 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000868375, whole genome shotgun sequence.
ACCESSION   DASCNL010000415 DASCNL010000000
VERSION     DASCNL010000415.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000868375"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..783
                     /locus_tag="QF359_05670"
     CDS             <1..783
                     /locus_tag="QF359_05670"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86430.1"
                     /translation="LNVAHGDLVMIGAYVAFMAFSLFNVGPLISMFAAAIICGGLGWL
                     AYRSVLQNLLANSEILARLEENSLLLFFGISVVVQNLVTLFFTADRQGYEYLSAIVEI
                     ADVRLTGARLAVLVVGSVISIVAVLYLRFSLFGLAMNALIQNRDASAVVGINVDRVQM
                     YSLVIGFGITGLAGALISVLEPITPVMGFPYTMSAFVVIILGGLGNLWGGFLAGLLLG
                     FLEIFGVAVTGPEWRSVLVYGIFIGILIFRPQGLLGHGRIAR"
     gene            780..>1026
                     /locus_tag="QF359_05675"
     CDS             780..>1026
                     /locus_tag="QF359_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86431.1"
                     /translation="MSNSFKFICIAAVIIIPGSLSGFASEYMLGIGFTLFMYIALAQS
                     WIILSGMTGYISLGHVVFFGSGAYVFVLIWGLVPVWLG"
BASE COUNT          170 a          241 c          278 g          337 t
ORIGIN      
        1 ttaaacgtgg cacatggcga tctggttatg atcggcgcct atgtcgcctt tatggccttt
       61 tccttattta atgtcggccc actgatttca atgtttgctg cggccattat ttgtggcggc
      121 ctaggctggc tggcctatag aagcgtcctt caaaatcttc ttgccaacag tgaaattctc
      181 gcccgcttgg aagaaaattc attgctgttg ttcttcggta tttccgtcgt tgtacaaaat
      241 ctggtcaccc tgttttttac cgctgaccgg caaggctacg aatatctcag tgccatcgta
      301 gagattgctg atgtgcggtt gaccggtgcg cgtctcgcgg tgctggttgt cggttcggta
      361 atttctatcg ttgcggtctt gtatctgcgc tttagcctgt ttggtctggc gatgaacgca
      421 cttattcaaa atcgggatgc cagcgccgtc gtcggcatca acgtagaccg tgtgcagatg
      481 tacagtttgg ttattggctt tggcatcacc ggcttggccg gtgctttaat cagcgtattg
      541 gagccgatca ccccggtgat gggttttccg tatacgatgt cggcgttcgt cgtcattatt
      601 ttgggcggcc tcggcaattt atggggtggc tttctcgccg gcctgctatt gggttttctg
      661 gaaatttttg gtgtagccgt caccggacca gagtggcgtt cggtattggt ctacggcatc
      721 ttcatcggca ttttgatatt ccgaccgcaa ggcctactcg gtcacggcag gatcgcccga
      781 tgagtaacag ctttaaattt atctgcattg cagccgtcat catcataccc ggcagtttat
      841 ccggttttgc cagcgaatat atgctgggca tcggctttac cctttttatg tatatcgcct
      901 tggctcaaag ttggatcatt ttgtctggta tgactggcta tatctcgctc ggccatgtcg
      961 tattttttgg ctccggcgct tatgtttttg tgctgatctg ggggctggtt ccggtttggc
     1021 tgggtg
//
LOCUS       DASCNL010000416         1279 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000869580, whole genome shotgun sequence.
ACCESSION   DASCNL010000416 DASCNL010000000
VERSION     DASCNL010000416.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1279)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1279)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000869580"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..302
                     /locus_tag="QF359_05680"
     CDS             <1..302
                     /locus_tag="QF359_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86432.1"
                     /translation="IQMRLAEMATDLEAATHLVYHAAQLLDEGKEHRKEASMAKLFAS
                     EAAASICEKAARIFASYGYAMEYPVQRFLRDVRFILIGGGTSDILKLVIAKELST"
     gene            299..718
                     /locus_tag="QF359_05685"
     CDS             299..718
                     /locus_tag="QF359_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HJO86433.1"
                     /translation="MTAADNSKVKILVGKPGLDGHDVGAKVVVRALMDAGFEVIYTGL
                     RKTPSEIAQQALDEKVDVIGLSSLAGSHLPYCKKLKGLIDQYGLKEKLWLIGGCVPKK
                     DHAELKKIGLDGIFPNGSKLEDIIVYIEKNAKMKEDA"
     gene            718..>1279
                     /locus_tag="QF359_05690"
     CDS             718..>1279
                     /locus_tag="QF359_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HJO86434.1"
                     /translation="MDGSSSDLKEVVNESGIEIRPLYGPEDVEESGGIEFIGDPGSYP
                     FTRGIHKEMYRKRPWTMRQYAGFGNPVDTNKRFKYLIENGQTGLNVAFDLATQTGLDS
                     DNVLAEGEVGRVGMAIDSLRDMEIAFDGIDLEKITVSLTINGSAAILIGMYLAMAEKK
                     GYDVSKLRGTAQNDILKEFVGRGTWIF"
BASE COUNT          334 a          294 c          351 g          300 t
ORIGIN      
        1 cgatacaaat gagacttgct gaaatggcga cggatttgga agctgccaca cacctcgttt
       61 accacgccgc ccaattgctg gatgaaggta aagagcaccg caaggaagct tcgatggcga
      121 aactgtttgc ctcggaagct gccgcctcaa tttgtgaaaa agccgcgcgg atttttgcct
      181 cttacggtta cgccatggaa tatccggtgc agcgcttttt gcgtgatgtc cgctttatcc
      241 taatcggcgg cggcaccagt gacattctca aactcgtcat cgcaaaggag ctatcgacat
      301 gaccgccgca gacaacagca aagtaaaaat cctggtcggt aagccgggcc tggatggcca
      361 cgacgtcggc gctaaagttg tcgttcgtgc gctgatggat gcaggttttg aagtgattta
      421 cacgggctta agaaaaacgc cgagtgaaat cgcccaacaa gccttggatg aaaaggtaga
      481 tgttatcggc ctctcaagtc ttgcgggttc ccatctgccc tattgtaaaa aactaaaagg
      541 cttgattgat caatacgggc tcaaggaaaa gctctggctg atcggtggct gtgtgccgaa
      601 aaaagatcat gccgagctca agaaaatcgg gctcgacggc attttcccga acggcagcaa
      661 gcttgaagat attatcgtat atatcgagaa aaatgccaaa atgaaggagg acgcgtgatg
      721 gatggttcat cgagtgatct gaaagaagtc gtcaacgaat ccggcattga aattaggccg
      781 ctttacgggc ctgaagacgt tgaagaatca ggaggtattg agtttatcgg tgatccgggc
      841 agctatccgt ttacccgtgg tatccataag gagatgtacc gcaagcggcc ctggactatg
      901 cgccagtatg ctggttttgg taatccggtc gacaccaata agcgttttaa atatttgatt
      961 gagaacggcc agaccggcct caatgtcgca tttgatctag cgacccagac cggtctcgat
     1021 tcagataatg tgctggccga aggcgaagtg ggccgggtcg gcatggcgat cgacagtctg
     1081 cgcgatatgg aaattgcttt tgacggcatt gatctcgaga aaatcacggt ctcactgacg
     1141 attaatggtt cggcagcgat attgatcggc atgtatctcg ccatggctga aaagaagggc
     1201 tacgacgttt ctaagctgcg cggcaccgca caaaatgata ttctcaagga atttgttggc
     1261 cgcggcacct ggattttcc
//
LOCUS       DASCNL010000417         1404 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000870057, whole genome shotgun sequence.
ACCESSION   DASCNL010000417 DASCNL010000000
VERSION     DASCNL010000417.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000870057"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1189
                     /gene="nrfD"
                     /locus_tag="QF359_05695"
     CDS             <1..1189
                     /gene="nrfD"
                     /locus_tag="QF359_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HJO86435.1"
                     /translation="KGDGLKFYGALGSFGLAALFGLVAAYYMETNGHHVTGMNNQIVW
                     GMPHVFAVFLIVAASGALNVASIGSVFGKTAYKPLARLSGLVAIALLVGGLAVLVLDL
                     GRPDRLIVAMTTYNFKSIFAWNIYLYIGFLAMVAVYLWMMMEQRMNRYSHTVGVVAFI
                     WRLALTTGTGSIFGFLVARQSYDAAVFAPLFIAMSFALGLAVFILVLVVSCATDDRSL
                     GDYIVSKLGRLLGVFVAAVLYFVVVQHLTNLYAAEHLGVERFILLEGGSITALFWVGQ
                     IALGGLLPLVLLFHPALNKSRSNIYAAAGLVILGGLAQIYVIIIGGQSYPLVLFPGME
                     VKSSFFDGVVNSYLPSLPELILGIGGIAMAGLIIMIGMKVLRFLPDSLADNATDPHFE
                     ETP"
     gene            1209..>1404
                     /locus_tag="QF359_05700"
     CDS             1209..>1404
                     /locus_tag="QF359_05700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinic acid a,c-diamide synthase"
                     /protein_id="HJO86436.1"
                     /translation="MAHSLFISAALKSSGKTTVTMGLCAALRQRGVTVQPFKKGPDYI
                     DPMWLSRAAQKPCRNLDFYTM"
BASE COUNT          266 a          316 c          381 g          441 t
ORIGIN      
        1 aaaaggtgat gggctaaaat tttatggtgc ccttggctcg tttggcctag ccgcattatt
       61 tggtctagtc gctgcctatt atatggaaac caatggccat catgtcactg gtatgaacaa
      121 tcagattgtc tggggtatgc cgcatgtctt tgctgttttt ctgattgttg cggcatcagg
      181 ggcgctcaac gttgcctcca tcggatcggt ttttggaaag acggcttata aaccgctcgc
      241 ccgcttgtcc gggctggttg ccattgcctt gttagtcggc ggcttggccg tattggttct
      301 ggatttgggg cggcccgacc ggctgattgt cgccatgaca acctataatt tcaaatccat
      361 ctttgcctgg aatatctatc tttatattgg ctttcttgcc atggttgcgg tctatctttg
      421 gatgatgatg gagcagcgaa tgaaccgtta tagccacacc gttggcgtcg tcgcctttat
      481 ctggcggctc gctttgacca ctggcacagg ctcgatattc ggatttttgg tcgcccgtca
      541 aagctatgac gcagccgtgt tcgcgccact ttttatcgcc atgtcgtttg ctcttggtct
      601 ggcagttttt atattggtgc tggttgtttc ctgcgctacc gatgatcgat cgttaggcga
      661 ttatattgtc agcaagcttg gccgtttgtt gggtgtattc gttgccgcag tgctttattt
      721 cgtcgtcgtc cagcatttga cgaatttata tgcagcggaa catctcggcg ttgaacggtt
      781 tattcttttg gaaggtggct cgatcactgc gctgttttgg gttggtcaga tcgccctagg
      841 tggattactg cctttggttt tgttgtttca ccctgcactc aataagtcgc gctcgaatat
      901 atatgcagcg gcaggtttgg ttatcttggg tgggctggcg cagatctatg tcattattat
      961 tggcgggcag tcatacccgc tggttttgtt cccgggcatg gaggtgaaaa gctcgttctt
     1021 tgacggtgtc gttaatagct atttaccgag cctgccggaa ttaatattgg gaattggcgg
     1081 tatcgcgatg gccgggttga tcattatgat tggtatgaaa gtattacgat ttttgccgga
     1141 tagccttgcc gataacgcaa ctgatcctca cttcgaagaa accccttagg tgattgaaag
     1201 gccggattat ggcacatagc ctgtttatct cagcagccct gaaatcctcg ggtaaaacga
     1261 cggtgaccat gggtctctgt gcagctttgc gccagcgcgg cgtgacggtt caaccgttta
     1321 aaaagggacc tgattatatt gatccgatgt ggttgagccg ggcagcacag aagccatgcc
     1381 gcaatctcga tttctacacc atgg
//
LOCUS       DASCNL010000418         1245 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000870461, whole genome shotgun sequence.
ACCESSION   DASCNL010000418 DASCNL010000000
VERSION     DASCNL010000418.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1245)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1245)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000870461"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            44..733
                     /locus_tag="QF359_05705"
     CDS             44..733
                     /locus_tag="QF359_05705"
                     /inference="COORDINATES: protein motif:HMM:NF015237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HJO86437.1"
                     /translation="MVGLKLSLATWNLIKLYIQQYPVAGLATVFFSGVLAWGSFNWSL
                     EITNTEKFCISCHEMRENVFKEYQTSIHYSNMTGVRASCPDCHVPRTSIFKIARKVRA
                     TNELYHWAIGSIDTKEKFQARRYYLAKKVWSIMESNNSQECRNCHDIDSMDTAEQPDK
                     PRLFHELSVVWDMTCIDCHKGIAHSLPKEFDVELVMDKLHDRMEKEEVTCQSCHTKLV
                     SAPPGDGWDDK"
     gene            785..>1245
                     /locus_tag="QF359_05710"
     CDS             785..>1245
                     /locus_tag="QF359_05710"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HJO86438.1"
                     /translation="MARIFVLSLVLPVLLFSINPPSLAQKEAQTALASVLKKGKAIFK
                     ENCEVCHQADAIGKAGIAPSLTNPEFLSISSDKFLERTIRDGRADTSMMPFAHLGRTK
                     VRAVVTYLRSHEKLPHRSKEVNSQADARGDPRLGKTWYMNICSTCHGSDGNG"
BASE COUNT          355 a          292 c          292 g          306 t
ORIGIN      
        1 cccaaaaatt taccgttgct aagcttggat ggaaggaata gctatggtgg ggcttaaatt
       61 aagtttggca acatggaatc ttatcaaatt atacattcag caatatcccg ttgccggatt
      121 agcaaccgtg tttttcagcg gcgtattagc ctggggctcc ttcaactgga gcctcgagat
      181 caccaatacc gaaaaattct gcatctcgtg ccacgaaatg cgcgaaaacg tattcaaaga
      241 ataccaaacc tccattcatt attcgaatat gactggcgtt cgcgcatcct gtcccgattg
      301 ccacgtaccc cgcacctcga ttttcaaaat agcccgcaag gttcgcgcca ccaatgagct
      361 ttatcattgg gcgattggat caatcgatac caaagaaaaa ttccaagcca gacgatatta
      421 tctggcgaaa aaagtttggt cgataatgga atcaaacaat tcccaggaat gccggaactg
      481 ccacgatata gattcaatgg ataccgccga gcagccggac aaaccacggt tgttccacga
      541 gctttcggtg gtttgggata tgacgtgtat cgattgccac aaaggaattg cacattcact
      601 ccccaaagaa tttgatgtag aattagttat ggataaatta catgatcgta tggaaaaaga
      661 agaagtgact tgtcagtctt gtcacactaa attagtaagt gcaccacccg gtgatggctg
      721 ggacgacaag taagaattca atacgtaacg tttaatttag agcggctaaa aaaaggaaaa
      781 gatgatggcc cgaatatttg ttttaagtct agttcttccg gttttgttat tttcaattaa
      841 cccgccgagt ttggcacaaa aagaggctca aacggctttg gcgagcgttc tcaagaaggg
      901 caaagccatc tttaaagaga actgcgaggt ctgtcatcag gccgatgcga ttggcaaggc
      961 cggcattgca ccgtcgctaa ccaatcccga atttctcagt atttcctccg ataaattctt
     1021 ggagcgcacc atcagagacg gccgcgcaga tacgtcgatg atgccgtttg ctcatcttgg
     1081 ccgaaccaaa gtccgggccg ttgtcactta tttgaggtcg cacgaaaaac tgccccaccg
     1141 gtccaaggag gtcaacagtc aggccgatgc ccggggcgat ccgcgcctcg gcaagacctg
     1201 gtacatgaat atttgctcga cctgtcatgg cagtgatggc aatgg
//
LOCUS       DASCNL010000419         1693 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000872090, whole genome shotgun sequence.
ACCESSION   DASCNL010000419 DASCNL010000000
VERSION     DASCNL010000419.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000872090"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="QF359_05715"
     CDS             complement(<1..182)
                     /locus_tag="QF359_05715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86439.1"
                     /translation="MSFDPYLVEISIYGRNTLPYTFVLSGCGKFAGNMPEGAPEINWK
                     TTGKTTGKTTAKISVVG"
     gene            181..>1693
                     /locus_tag="QF359_05720"
     CDS             181..>1693
                     /locus_tag="QF359_05720"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HJO86440.1"
                     /translation="MSNVSMLIVGCGVIALLYGMYTIRSVLAAPAGTDRMQEIAAAIQ
                     EGASAYLNRQYTAIAIAGVVIGIILGLFLGWAAAIGFFIGAILSGAAGYIGMNVSVRA
                     NVRTAEAARSEGLAEGLAVAFKSGAITGMLVAGLALLGVVVYWLILKGMIDTSKVEGM
                     RHVLESLVALGFGASLISIFARLGGGIFTKGADVGSDLVGKIEAGIPEDDPRNAGVIA
                     DNVGDNVGDCAGMAADLFETYAVTVVATMLLAAAFFTGTAQEAMMTFPLLIGAVCIIG
                     SVAATFFVKLGSSNSIMGALYKGFFASAIISAILIAVVINWQFGFDGTFNSNGTEITG
                     MDLFISALVGLVVTALIVLITEYYTGTDYRPVKSVAAASETGHATNIIQGIAVSMEAT
                     ALPVIVICAGIIVAFLTAGLFGLAIAATSMLALAGMVVALDAFGPVTDNAGGIAEMAD
                     LPDNVRKTTDALDAVGNTTKAVTKGYAIGSAGLAALVLFAAYTADLSLLFPNLK"
BASE COUNT          338 a          397 c          442 g          516 t
ORIGIN      
        1 ccaacaaccg atattttagc tgttgttttg ccggttgttt tgccggttgt tttccagttg
       61 atttctggtg cgccttctgg catgttcccg gcgaattttc cacacccact taaaacgaaa
      121 gtgtagggaa gggtgttcct cccatatatc gagatttcaa ctaaataagg gtcaaacgac
      181 atgtctaatg tttcaatgtt gatcgtcggt tgcggcgtca tcgcactact ttatggtatg
      241 tatacaattc gctccgtgct ggctgcgcca gctggtactg atcggatgca ggaaatcgca
      301 gctgcaattc aggaaggtgc tagcgcttat cttaaccgcc agtacaccgc gattgctatt
      361 gccggcgtgg tgatcggcat tattctcggc ctgttcttag gctgggctgc tgccatcggc
      421 ttcttcatcg gcgctatctt atccggtgct gcgggatata ttggcatgaa cgtttcggtt
      481 cgcgccaatg ttagaactgc cgaagctgcg cgctccgaag gtctcgccga aggtctggct
      541 gtcgccttta aatccggcgc tatcaccggc atgttggtag ccggcttggc actgctgggt
      601 gtggttgttt actggttaat tcttaaaggt atgattgata cttccaaggt tgaaggaatg
      661 cgccatgtgc ttgagtcttt ggtcgcactt gggtttggcg cgtcgctgat ttctatcttt
      721 gcccgtctcg gcggcggcat cttcaccaaa ggtgccgatg ttggttcaga cttagttggc
      781 aaaattgaag ctggtatccc agaggatgat ccccgcaatg ctggcgtcat cgcggataat
      841 gttggcgata atgttggtga ttgcgccggt atggcagcgg atttgtttga aacctatgcg
      901 gtgacagtcg ttgctactat gttgttggct gctgcttttt tcactggcac ggctcaagaa
      961 gcgatgatga cattcccgct cctgattggc gcagtttgta ttataggttc tgtcgcggct
     1021 acttttttcg tcaagctggg ttcaagcaat tcaatcatgg gcgcgctata caagggcttc
     1081 tttgccagcg caattatctc agccattctg atagccgttg tcattaattg gcaatttggc
     1141 tttgacggca cctttaacag taacggcact gaaataaccg gtatggattt gtttatatcc
     1201 gctctggtcg gtttggttgt gacggcttta atcgttttga taaccgaata ctacaccggg
     1261 accgattatc gtccagtgaa aagcgttgca gcagcatctg aaactggtca tgccaccaac
     1321 atcattcaag gcattgctgt ttcaatggaa gcaaccgcac tgccggttat cgtcatttgt
     1381 gcaggcatta tcgttgcatt tctcacagca ggcctctttg gtttagctat tgctgcaaca
     1441 tcgatgcttg cactggccgg tatggttgtt gcccttgatg cttttggccc agttaccgat
     1501 aacgccggtg gcatcgccga aatggcagat ttgccggata atgttcgcaa aacgacagac
     1561 gctcttgatg ctgttggtaa taccaccaaa gccgttacta aaggctacgc gatcggttct
     1621 gccggtctag ccgctttggt tttgttcgcc gcttatacgg cagatttgtc tttgttgttc
     1681 cccaacttaa aag
//
LOCUS       DASCNL010000420         1280 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000872719, whole genome shotgun sequence.
ACCESSION   DASCNL010000420 DASCNL010000000
VERSION     DASCNL010000420.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000872719"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1164
                     /locus_tag="QF359_05725"
     CDS             <1..1164
                     /locus_tag="QF359_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HJO86441.1"
                     /translation="SLEGGTILIVAAIIGGYMALNIGANDVANNVGPAVGSKAITLIG
                     ALLIAAVFEAAGAIIAGGDVITTISKNIIDPNTVSDKDTFIWMMMAALLAAAVWVNLA
                     TYVGAPVSTTHAVVGGVLGAGVAAAGVAAVNWQVMAKIAASWVISPVLGGLIAAGFLS
                     FVKYFILYQDDKITAAKKWVPVLVSILAGAFSVYLMMKGLKRVWKPEPYMIAMIGGGA
                     FAIAFALVRPAIAKAATTMPNRQKSVSDLFTIPLICAAALLSFAHGANDVANAVGPLA
                     AIVSAVTAGTVAAKVTLPIWVLVVGAIGISIGLFLFGPKVIEIVGEKITKLNRVRAFC
                     VALSAAITVIIASAFGLPVSSTHIAVGAVFGVGFLREFLANKNKPIADAVSYS"
BASE COUNT          248 a          313 c          358 g          361 t
ORIGIN      
        1 agcctcgaag gtggcaccat cctcatcgtt gccgctataa tcggcggcta tatggcactt
       61 aatataggcg ccaatgatgt tgctaataat gttgggcccg cagttggctc aaaggccatt
      121 actttaattg gcgcgctact tattgccgca gtctttgaag ccgccggagc aattatcgcc
      181 ggtggtgatg tcatcaccac aatttccaag aacatcatcg atcctaatac ggtctccgat
      241 aaagacactt ttatctggat gatgatggcg gcccttttag cggcggctgt ttgggttaat
      301 cttgcgacct atgttggcgc accggtatcg accacccacg ctgtggttgg tggcgtgctt
      361 ggcgccggtg tcgcagccgc cggcgttgct gctgtcaact ggcaggtaat ggcgaagatt
      421 gccgcaagct gggtcatatc gccggtgctt ggtgggctta tcgccgctgg ctttttgagc
      481 tttgttaaat attttatcct ttatcaggat gacaaaatta ctgctgccaa aaaatgggtg
      541 ccggtgttgg tttcgatact cgctggtgcg ttttcggtct atctgatgat gaaaggcctc
      601 aaacgcgtgt ggaagccgga gccctacatg atcgcgatga tcggcggggg ggcattcgcc
      661 attgcttttg ccttggtgcg gcctgctatt gccaaggcgg cgacgacaat gcccaatcgg
      721 cagaaatctg tcagcgatct ttttacaatc ccgttaattt gtgccgctgc ccttttaagc
      781 tttgcccatg gcgccaatga tgtcgctaat gctgtcggcc cgctcgcggc gattgttagc
      841 gcggtcacag ctgggacggt tgccgccaaa gtaaccctgc cgatttgggt gctggtggtt
      901 ggtgcaatcg gaatctcaat tggtttgttt ttatttggcc cgaaagttat cgaaatcgtt
      961 ggtgagaaaa ttaccaaact caatcgagtg cgggcttttt gtgttgcact atcggcggcc
     1021 attaccgtga ttattgcttc agccttcggc ttgccggtca gttctactca tatcgccgtc
     1081 ggcgccgtgt ttggtgttgg cttcttgcga gaattcctag ccaataaaaa caaacctatt
     1141 gcagatgcag tttcttacag ttaaacctcc ggcgagccgg cgagttggga ggaaactcgt
     1201 gcggcggcgt catttagcga ccattgttgc ggcttgggtt atcaccgtac cggcggcagc
     1261 tatcctgtct gggttgatat
//
LOCUS       DASCNL010000421         1642 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000872729, whole genome shotgun sequence.
ACCESSION   DASCNL010000421 DASCNL010000000
VERSION     DASCNL010000421.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000872729"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="QF359_05730"
     CDS             <1..232
                     /locus_tag="QF359_05730"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HJO86442.1"
                     /translation="VPEGVEGRVPYKGPVTNVIHQMVGGLQSSMGYTGNATIADMQQN
                     CKVRKITAAGLRESHVHDVTITRETPNYRVDD"
     gene            247..1554
                     /locus_tag="QF359_05735"
     CDS             247..1554
                     /locus_tag="QF359_05735"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013362.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HJO86443.1"
                     /translation="MTPGARIAAAIVILEKVERSNSSADDVVSSYLRGRRYIGSKDRR
                     AITGRVFDILRRQARLDWHTETPSPRSRVIADLKLNDMQSKDAISTLFDGKGYAPSTL
                     TVDETALLYKLSDHSFNDAEYPAAVAAELPDWLAEILVAQWKNKFIEEAAALNRPASL
                     DLRVNMLKGNCARALQVLQKDQIEAEPTAFSPLGLRLKGRVNLQASEAFKGGFIEIRD
                     EGSQIIAALVDTKATMKTIDLCAGGGGKTLALGAAMKDGGPLIACDLDEDRLKKMQPR
                     LHRSGVSNVTRHHITGDDDPWFSKHAATSERVLADVPCSGSGAWRRAPTQKWLLTPER
                     LEELVALQQKIMTQAADLVIPGGRLIYATCSVLPSENEDQITWFLQSHPDFKALPVPK
                     IWQTAVGTDCPATDSIGDTYLSLTPARHDTDGFFAAVLEKTHH"
BASE COUNT          404 a          437 c          443 g          358 t
ORIGIN      
        1 tgtgcctgaa ggtgtcgaag gccgggtgcc ctacaaaggt ccggtcacca acgttattca
       61 ccagatggtc ggcggcctgc agtcatcaat gggctatacc ggcaatgcga caattgccga
      121 tatgcaacaa aactgcaaag tccgcaaaat caccgcggcc ggcttgcgcg aaagccatgt
      181 ccatgacgtc accatcaccc gcgaaacacc gaattaccgt gtggatgact aagacatgac
      241 acaactatga ctccgggggc gcggattgca gcggccattg taatcctcga aaaagtggag
      301 cgctccaact catcagcaga tgacgtggtg tcttcttatc tgcgcgggcg gcgctacatt
      361 ggctcgaaag accggcgtgc catcaccggc cgggtgtttg atatcctgcg gcggcaagcc
      421 cggcttgatt ggcatacaga aactccgtca ccgcgatcgc gagtaattgc cgacttaaaa
      481 ttgaatgata tgcaatcgaa agacgccatc agcactttgt ttgatggtaa aggttacgcg
      541 ccgagcacac tgaccgtgga cgaaacggcg ctgctttata agctcagcga tcattctttt
      601 aacgacgcag aataccctgc tgccgttgcc gctgaactgc cggactggct cgccgagatt
      661 ttggtagcac aatggaagaa taaatttatc gaagaagcgg cggctctaaa tcggccggct
      721 tcgctcgatc tccgggtaaa tatgcttaaa ggcaattgcg cgcgggcgct tcaagtcctg
      781 caaaaagatc agatcgaagc cgagccgact gccttttcac cgctggggct gcgcctgaaa
      841 ggtcgggtta atttgcaagc ctcagaagcc ttcaaaggcg gctttattga gattcgggat
      901 gaaggctcac aaatcatagc tgccttggtc gataccaagg caactatgaa aaccatcgat
      961 ctttgcgccg gtggtggcgg caagaccttg gcgctcggtg cggcgatgaa agatggcggc
     1021 ccgctgatcg cctgcgattt ggatgaagac cgactaaaaa agatgcaacc aaggctgcac
     1081 cgtagcggtg tatccaatgt tacccgtcat catattactg gcgatgatga tccttggttt
     1141 agcaaacacg cagcgacaag tgagagggtt ctggctgatg tcccctgctc cggctctggg
     1201 gcctggcggc gagcaccgac acaaaaatgg ctgctgacac cggaacgcct cgaagaactg
     1261 gtagcgctgc aacagaaaat catgacccag gccgctgatc tcgtcatccc gggaggccgt
     1321 ttgatttatg ccacctgttc ggtgctgcca agtgaaaacg aagatcaaat cacttggttc
     1381 ttgcaaagcc atccggattt taaagcgctg ccagtgccca aaatttggca gactgccgtt
     1441 ggcacggatt gtccagccac tgattccatt ggagacactt acctttcctt aaccccggcg
     1501 cggcatgata ctgatggatt tttcgctgct gtgttggaga aaacccatca ctagaatacg
     1561 ctccgccaaa gaagaagacg ttcaggccat tgcttatgtc tatgtagaga cctggcgctc
     1621 gacctatgcc ggtattttgc ca
//
LOCUS       DASCNL010000422         3332 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000873830, whole genome shotgun sequence.
ACCESSION   DASCNL010000422 DASCNL010000000
VERSION     DASCNL010000422.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3332)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3332)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3332
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000873830"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="QF359_05740"
     CDS             complement(<1..757)
                     /locus_tag="QF359_05740"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HJO86444.1"
                     /translation="MTNLAKPDIRPANPNFSSGPCAKRPGWSPAVLNDALVGRSHRSK
                     PGKARIQEVLDKTHDILGIPEDYRIGIVAASDTGAVEMALWSMLGARGVDMLQWESFG
                     KGWVGDVTNQLKLDDVRELKAGYGQLPDLSKVDFTRDVVFTWNGTTSGVRVPNGDWIP
                     GDREGLTFCDATSAVFAMDLAWDKLDVTTYSWQKVMGGEAQHGMLILSPRAVERLESY
                     TPPWPIPKIFRLTSGGKLNEGVFKGATINTPSML"
     gene            901..1758
                     /locus_tag="QF359_05745"
     CDS             901..1758
                     /locus_tag="QF359_05745"
                     /inference="COORDINATES: protein motif:HMM:NF017672.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA];
                     GO_process: GO:0006672 - ceramide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ceramidase domain-containing protein"
                     /protein_id="HJO86445.1"
                     /translation="MFENSLHMLNARAIISAVKMRYRVGFLVTMFITTVVGILFIEPL
                     PQSIAYHGFVDTRVWLGIANIGNVASNVLFAIAGAYGLYFVFGPQGQCIFANSADRWP
                     YAFFFLGAALVSFGSAYYHLAPDNARLFWDRLPMTIAFMALFSIFIADRIDQRIGVKL
                     LLPILLMAGIISVFYWDWSETVGRGDLRFYFLVQFYPIVALPIICWLFPKGRYTSDRS
                     LIWLIACYAPAKVLEIFDAEVFSILGNIVSGHSLKHLASSVAIFVVIRMLADSRRSLS
                     EVNFKFPSQ"
     gene            1929..3185
                     /locus_tag="QF359_05750"
     CDS             1929..3185
                     /locus_tag="QF359_05750"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86446.1"
                     /translation="MDFQTFGLPEELILMRQTCREFVNAVVHPFVRANPEREWLFDPD
                     QRFPQEMLVEADKLGLRTIGVPEEFGGMQLDTEFEAQTLAIIAEELGRGDSGFADKLV
                     QNWKVARLLRLTAPEHLQEAWFPRLVEDPSFLLAHALTEPRGASDRWLPYNAPSANMD
                     TKAVLEDGQWVLNGRKHFISNGYDASLFVVYANTNPKVGIRDGSSSFLVPRETPGLTV
                     ARCNETLGGRYMNNGEIVFDDCLVPEDHILIKDTALQRKAGAYSNPGKIIQAAKNLGV
                     GVGAFEDTAAYVQDYVQGGQPLIKHQAVAVRLADMAIKIEAVRSFVRQTAQALDANIA
                     EAGRMCTMVKVHASEVILEVCRQAMELHGGAGTMLEMGIEKHFRDAAMFPHMDGTVDI
                     SSFQIIKSMFPDSAGSYAGPETGRET"
BASE COUNT          746 a          904 c          868 g          814 t
ORIGIN      
        1 agagcatcga cggagtgttg atggtggcgc ctttaaagac tccttcgttc aacttgccgc
       61 cggatgtcag gcggaaaatt ttcggtatcg gccagggcgg tgtgtagctc tccaaacgct
      121 caaccgcgcg ggggctcaag atcaacatac cgtgctgggc ctcgccgccc atcactttct
      181 gccaagaata agtcgtcaca tcgagcttgt cccaggctaa atccatggca aaaacagcgg
      241 aagtcgcgtc acaaaaggtc agcccctccc ggtcacccgg tatccaatca ccattgggca
      301 ctcgcacacc ggaagttgtt ccgttccagg tgaaaaccac atcacgggta aagtctacct
      361 tactaagatc aggcaattgg ccgtaaccgg ctttcaattc ccgcacatcg tcgagcttca
      421 actgattggt aacatcaccg acccaacctt tgccgaagct ttcccattgc agcatatcaa
      481 caccgcgggc accgagcatt gaccacaacg ccatttcaac cgcgccggta tcggaagcgg
      541 cgacaatacc aatgcggtag tcttcgggga taccgagaat atcgtgggtc ttatcgagaa
      601 cttcctggat tctggcttta ccgggcttgg aacggtgtga gcgtccaacc aaggcgtcat
      661 tgaggaccgc tggcgaccag ccaggacgtt ttgcacaagg tccggaagaa aaattgggat
      721 tcgccggacg gatgtccggt tttgctaagt ttgtcatctg ttttactcct atccttacag
      781 ataggtcgca atccgttggg ggattgtggc ccgccgccgc ttatatagag gtcggcatgc
      841 gccgtcaatt gaaacattgt ttatttatat caggctcagg tattgaatta gaggcggaaa
      901 atgtttgaga atagcctgca tatgttgaac gctagagcaa ttatcagcgc tgtaaaaatg
      961 cgttatcgtg tcggtttcct cgtgacgatg tttatcacca cggtggtggg catattgttt
     1021 atcgagcctt tgccgcaatc catcgcctat catgggtttg tcgatacgag agtatggctt
     1081 ggcatcgcca atattggtaa tgttgcgtcg aacgtgttat ttgccattgc tggtgcttat
     1141 gggctttact tcgtgtttgg gccccaaggt caatgcatat tcgcaaattc cgcggatcgc
     1201 tggccgtacg cctttttctt ccttggcgcc gcgctcgtca gcttcggttc ggcctattat
     1261 cacctggcac ctgacaacgc ccggctgttc tgggaccggt tgccaatgac aatagcgttc
     1321 atggcgcttt tttctatttt cattgctgac cggattgatc aacgtattgg ggtcaaattg
     1381 ctgttaccga ttctgctcat ggccggaatt attagtgtat tttattggga ttggagcgaa
     1441 actgttggcc ggggcgatct tcgattttac tttttggttc agttctaccc catcgtcgcg
     1501 ctgccgatca tttgctggct gttccccaaa gggcgataca ccagcgaccg ctctctcatt
     1561 tggttaattg cctgctacgc ccccgctaag gtattagaaa tttttgatgc ggaggtgttt
     1621 tccattcttg gtaatatcgt aagcggccac agtctcaaac acttggcctc gtccgttgct
     1681 atatttgtgg tcatccggat gctggcggat tcgcgtcgaa gtctttcaga ggtaaacttc
     1741 aagttcccca gccagtaaaa atcatcttga ccgatatcaa ggtgcccttc tcgccatttg
     1801 gctaacaata acaacataac ttgacgttta tattggaact ttcggtggtg ggcgcgggcg
     1861 agccccgcgg atctcgacca ttccgctagc tgacgccaca acattataaa gcccgaagga
     1921 acaaataaat ggatttccaa acattcggct tgccagaaga attaattctg atgcggcaga
     1981 cctgtcggga attcgttaat gcggtggtcc acccctttgt ccgcgctaat ccggagcgag
     2041 agtggctgtt cgatcctgac cagcggtttc cccaagaaat gttggtggag gccgataaac
     2101 taggtctgcg caccatcggc gtgccggagg aattcggtgg catgcagcta gacacggagt
     2161 tcgaggccca aacccttgca attatcgccg aggaacttgg ccgcggcgat tctggttttg
     2221 ccgacaagct ggtgcaaaac tggaaagtgg cgcggttgct cagattaact gcgccagaac
     2281 acctgcaaga agcctggttt ccgcgcctcg tcgaagaccc ctccttcctg ctcgcccacg
     2341 ccctcaccga accgcgcgga gcctcggacc gctggctgcc ctacaatgcg cccagcgcca
     2401 acatggatac caaagcagtc cttgaagacg gccaatgggt tctcaacggc cgcaaacatt
     2461 tcatcagtaa tggctatgac gcaagtttgt ttgttgtcta tgccaatacc aacccaaaag
     2521 taggtatccg cgatggctca agcagctttc tggtaccacg tgaaacacct ggcctgaccg
     2581 tggcacgctg caacgaaacg ctcggcgggc gttatatgaa caatggcgag atcgtgtttg
     2641 atgactgcct ggtacccgag gatcatattc tgatcaagga cacggctctg cagcgcaagg
     2701 ccggcgccta ttctaatccc ggcaagatca tccaggcggc caaaaacctg ggcgtcggcg
     2761 tcggcgcctt cgaggatact gcggcctacg tccaggacta cgtgcaaggc gggcaaccgc
     2821 tcatcaagca tcaggcagta gcagtacgtc tggctgacat ggcgatcaaa atagaggcgg
     2881 tgcgcagttt cgtccgtcag accgcccaag ccctggatgc taatattgcc gaggccggcc
     2941 gcatgtgcac catggtcaag gtgcatgcct cagaagttat cttggaagtt tgccgccaag
     3001 ccatggagct gcatggcggc gcgggtacca tgctggaaat gggcatcgag aaacattttc
     3061 gggatgccgc catgttccct cacatggacg gcacagtaga tatttccagc tttcaaataa
     3121 ttaaatccat gttccccgac agtgcaggct cttacgctgg gcccgaaacc ggacgtgaaa
     3181 cctaaagcag ctcagctata ctttaggcgt tccagcaccc tactccacac cggtatataa
     3241 acccgattca gcgaacgtca tgcgctggcg acccggttct tcggccgcta atggttcgca
     3301 cgccgtcata gtttcgtggc agcgtcctac ca
//
LOCUS       DASCNL010000423         1947 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000874085, whole genome shotgun sequence.
ACCESSION   DASCNL010000423 DASCNL010000000
VERSION     DASCNL010000423.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000874085"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="QF359_05755"
     CDS             <1..390
                     /locus_tag="QF359_05755"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86447.1"
                     /translation="ILPSSDIAKMKMIPYIKYIYTIPGKLYNTPFSIMMNQKRWDGLS
                     KDIQNAILSKAGLNISHHAKAWDDGLTEAIPRFKKAGVNYVPASPKLVADFKAIFASF
                     ADDWIKSAAKKGIDGKSALAFYRKNAM"
     gene            422..976
                     /locus_tag="QF359_05760"
     CDS             422..976
                     /locus_tag="QF359_05760"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO86448.1"
                     /translation="MSLNDVDQSVGAGAPPTLNLLDLLDKCLMACVAVVMFGMMAVTF
                     IDVLGRYVFSAPIPGGFEMIQFMMPLAMFGALPVITRSEEHIVISVMSGFLKSRGIWI
                     QRFIVLIGCIIVNAGLTYIMWLQGDELAEAKQISGFLEWSFAPPAYLISILSAFTVVI
                     ILLMLILHVLWPTAQSTGGKRDAI"
     gene            978..>1947
                     /locus_tag="QF359_05765"
     CDS             978..>1947
                     /locus_tag="QF359_05765"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO86449.1"
                     /translation="MLISLIGFAVLLVICFAGFPLGWAMVLIGFGGFGIVRGFDPAFA
                     TVGQLVLDFSMNYHFSTLPLFILMGAFVYRAALAEDMYDAAYAWLGHFRGGLAMTTVA
                     ACGGFAAVSGSSAATAATMAKVALPSMRRFNYDDRLAAGSVAAGGTIGILIPPSIALI
                     IYGILVEEDIGKLFIAGVAPGILTIILYIAVIRIVTLVKKDWGPPGERTPWLERFKAL
                     GKVWGIVLLFLFILGGIYAGIFTPSEAGGIGAAGALAFAIVRKKMTWVEFYKSLVEAG
                     KTTVFVFTVAYGAIIFSNFINIAGMPDDILDFVNDLNVPPMGVIFAI"
BASE COUNT          424 a          456 c          468 g          599 t
ORIGIN      
        1 atcttgccat cttccgatat cgccaagatg aagatgattc cttatatcaa gtacatctat
       61 acaattcccg gtaaactcta taacacccca ttttccatta tgatgaatca aaaaagatgg
      121 gatgggcttt caaaggacat tcaaaacgcc atcttaagca aagcgggcct gaatatttcc
      181 caccatgcca aagcgtggga tgacggattg actgaagcta tacctagatt caaaaaggct
      241 ggtgttaatt acgtcccggc cagcccaaag ctagtcgccg attttaaagc aatatttgct
      301 tcctttgcgg acgattggat taaatctgcg gcgaaaaaag gtattgatgg caaatctgcc
      361 ctcgcttttt atcgcaaaaa tgcaatgtaa ttgaggcacc aaataacttc gggtaaattt
      421 agtgtcactc aacgatgttg atcagagtgt gggagcggga gcgcctccca cactcaatct
      481 tttagattta ttggacaaat gcctgatggc ctgtgtcgct gttgttatgt ttggcatgat
      541 ggcggtgaca tttatcgacg tattgggacg ttacgttttt agtgcaccga taccgggtgg
      601 ctttgagatg attcaattta tgatgcccct ggcgatgttt ggagccctac cggtcatcac
      661 gcgctccgaa gaacacattg ttatttccgt catgagcgga ttcttaaaat cgcgcggcat
      721 ttggattcaa aggtttattg tgttgatcgg ctgcatcatc gtcaatgctg gtctcaccta
      781 cataatgtgg ctgcaaggtg acgaactggc agaagccaaa cagatttccg gttttctcga
      841 gtggtctttt gctcctcctg cctacctcat cagcatcctt agcgccttca ccgttgttat
      901 tattttattg atgctcattt tgcacgtttt gtggcccacc gctcaatcca ccggcggcaa
      961 gagggacgcc atctaaaatg ctcatttctc tcatcggctt tgccgtcctt ctcgttatct
     1021 gttttgccgg ttttccgctt ggctgggcga tggtcctcat cggttttggt ggatttggta
     1081 ttgttcgtgg atttgatcca gcctttgcca ccgtcggcca gctcgttctt gatttctcga
     1141 tgaactatca tttctcgaca ttaccgttgt ttattttaat gggcgccttt gtttatcgag
     1201 ccgcattggc tgaagatatg tacgatgccg cctatgcttg gctcggccat ttcagaggtg
     1261 gcctcgccat gaccacggtt gctgcttgtg gtggctttgc tgcagtttct ggaagttccg
     1321 ccgcgactgc ggcgaccatg gctaaagtcg ccctgccatc aatgcgccgt tttaattacg
     1381 atgaccgatt ggctgccgga tcggtcgcag cgggtggcac aatcggtatt ctcattccgc
     1441 cgagtattgc tctaattata tatggcatct tggtcgagga agacattggc aaacttttca
     1501 tcgccggcgt tgcgccgggg attttaacta tcattcttta tatcgccgtg attcgcattg
     1561 tcactttagt gaaaaaagac tggggacctc caggcgaacg aacaccttgg cttgagcgct
     1621 ttaaagccct cggcaaagtt tggggtattg tgctgctctt tcttttcata ttaggcggca
     1681 tttatgcggg catatttacg ccaagtgaag ctggcgggat cggtgcggca ggtgcactcg
     1741 cctttgccat cgtgcgcaaa aagatgactt gggttgaatt ctataaatct ctggttgaag
     1801 cgggcaaaac cactgtcttc gtttttaccg tcgcctatgg tgcgattatt ttttccaatt
     1861 tcattaatat cgccggtatg cccgatgata ttttggattt cgtcaacgat ttgaacgtgc
     1921 cgcctatggg tgtcatcttc gccatat
//
LOCUS       DASCNL010000424         1041 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000876310, whole genome shotgun sequence.
ACCESSION   DASCNL010000424 DASCNL010000000
VERSION     DASCNL010000424.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000876310"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /gene="rpsM"
                     /locus_tag="QF359_05770"
     CDS             complement(<1..280)
                     /gene="rpsM"
                     /locus_tag="QF359_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011651425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HJO86450.1"
                     /translation="MARIAGVNKPTQKRVEIALTYIFGIGRSHAKTICTKTEIPAGRR
                     VHELTDDEVVRIRELIDAEYQVEGDLRRETSMNTKRLMDLGCYRGLRHR"
     gene            complement(415..>1041)
                     /locus_tag="QF359_05775"
     CDS             complement(415..>1041)
                     /locus_tag="QF359_05775"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HJO86451.1"
                     /translation="PGAGKGTQCERLVETYGLVQLSTGEMLRAEVKSGSKLGQTAKKL
                     MDAGQLVRDDLIISMISNQFDQHSDAKGVILDGFPRTTAQAEALDVMLSEKGLTMDHV
                     VQLEVCEDAMVERLSGRFSCANCGAGYHDSFRRPAEEGKCDKCGHTKFSRRSDDNPET
                     VRSRLVAYREQSAPVLPFYQDKGVLQSVGGMGGMDEVFDQIKEIVANG"
BASE COUNT          270 a          281 c          220 g          270 t
ORIGIN      
        1 gccggtgacg taaaccacga tagcagccca aatccattaa ccgtttggta ttcatcgatg
       61 tttcacgacg caggtcgcct tcgacctggt actccgcatc gattaattca cgaatgcgta
      121 cgacctcatc atcggtaagt tcatgcacac gtcgcccagc tggaatctcg gttttcgtac
      181 aaattgtttt cgcatgtgag cgaccgattc caaaaatata tgtaagcgca atttcaaccc
      241 gtttttgggt aggtttgtta acgccagcga tacgagccaa agctgaatct ccttagcttt
      301 aaaaaacagt tacaaattct atcgcggggg gttcccaaag tggcgcgatt ataggcacaa
      361 agtatctaaa gtcaatgcgt tagcccctat tttcaacacc atataaacac ttggttatcc
      421 gttagcgaca atttccttaa tttggtcaaa gacctcatcc attcccccca taccaccgac
      481 agactgtaaa acacccttat cttggtaaaa aggtaatacc ggggcagatt gctcccgata
      541 cgcaaccagt ctggaacgca ccgtttccgg attgtcgtca gaccgtcgtg aaaattttgt
      601 atggccgcat ttatcacatt taccctcttc agccggccgt ctgaaggaat cgtgatagcc
      661 agcaccgcaa ttagcgcagg aaaagcgacc ggaaagccgt tcaaccatgg catcttcaca
      721 aacttccaac tggacaacat ggtccattgt taagcctttt tcagataaca tcacgtcgag
      781 cgcctctgcc tgggcggtgg tccggggaaa gccgtccaag attacccctt tagcatcgct
      841 atgctgatcg aattggttgg atatcatcga tataatcaga tcatcccgca ccagttggcc
      901 cgcatccata agttttttcg ccgtctggcc aagcttgctg cctgatttaa cttcggcacg
      961 gagcatttca ccggttgata attgtacgag accatacgtt tcaaccaaac gctcacattg
     1021 cgtacctttg ccggcaccgg g
//
LOCUS       DASCNL010000425         2235 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000878200, whole genome shotgun sequence.
ACCESSION   DASCNL010000425 DASCNL010000000
VERSION     DASCNL010000425.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000878200"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            591..959
                     /locus_tag="QF359_05780"
     CDS             591..959
                     /locus_tag="QF359_05780"
                     /inference="COORDINATES: protein motif:HMM:NF020317.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HJO86452.1"
                     /translation="MPVYMTEAKLSEESLAVLSNKPSDRKKEVKKVIDAYGGKLIDFY
                     WMFGEYDVLTIYDAPDNSIAMAILMTLSAGGNVASHRSTILVPNDQAMKAMKLSGSKP
                     TGYKSLRKEWAGWRDEGGES"
     gene            complement(1287..2042)
                     /locus_tag="QF359_05785"
     CDS             complement(1287..2042)
                     /locus_tag="QF359_05785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HJO86453.1"
                     /translation="MAFRQNDDYSIRTQGLAQAEASELDVGLRQYMLQVYNYMASGLV
                     LTGIFAYGGAKIPALLNLMYAAGPGGALQPTMFAWIIMLAPLAFILVLSFGIQRMKAS
                     TAQAMFWAFAAIMGLSLTHIFLVYTGTSITRVFFITAGTFASMSLYGYTTKRDLSKFG
                     SFLFMGLIGIIIASVVNIFMQSSAMAFVISVVGVLVFVGLTAHDTQNIKRMYVEGEHS
                     ETASKKAVMGALSLYLDFLNLFIILLHLLGARR"
BASE COUNT          641 a          475 c          528 g          591 t
ORIGIN      
        1 gcaaatgata ttcggtgatg cgggtcaggc gcaccggtat ccagtaatcc ttgggtgtgg
       61 tctcatattt atcatccgca tcgacggtga gttcttcgtc tttcggtgaa tttaccagtt
      121 taaatattgc tgcctataag gggctaataa acggaatatt ttttaaatca tttacctcct
      181 cacgggcgga attatcaact gacgtaacct cctatttttc agttgaaaaa attgccgtga
      241 ggttccaaaa gcggcagttt tgttcggtgc catcttccgg tccaacggca cagccgaaca
      301 acaacaatcc gccccgcaga ataagaccca attttggccg aaaagagaaa gatgggtggc
      361 acattcacta atttttccct gacgtttaaa ccgctaatca atacgctcag ggtgtgtctt
      421 tatttctctc ccataccaac tatacccaag aaaacccacc atatctagta gatgatatgt
      481 ctgattattc taaatctagg caagaacctg tggataagtg ctggttggcg aatggcggcg
      541 aatgttttac catgctgaaa agcgctaatc taaaaaatag ggagtcgtta atgccagttt
      601 atatgaccga agcaaaactt tcagaagaat cactggcagt attgtcgaat aaaccatctg
      661 atcgcaaaaa agaagtgaaa aaggtcattg atgcctatgg aggaaagttg atcgattttt
      721 attggatgtt tggagagtac gacgttctta ccatatatga tgcgcccgac aattctatcg
      781 ccatggcaat tttgatgact ttgtcggctg gtggcaatgt ggcgtcgcat cgatcgacca
      841 tcctggtgcc caatgatcag gctatgaaag cgatgaaact ctccggttcc aaacccaccg
      901 gttataaatc tttacgcaaa gaatgggctg gctggcgcga tgagggcggt gaaagctaat
      961 cgtgaaagcc gcatttaccg gaatatctcg gaatatcttt gggctttaaa cattagtgtc
     1021 agtagagctg ttcactgttg tgtgttttga ccttgatcgg gtcgatgcgc taatatttgt
     1081 actgagggag aattggatat gagtggaaca ccgaggtaaa aaattgttgc tggttttatc
     1141 ggtttgatgc tgctggctgg ttttttaatt gatgcccggg cggcagaaag gtaaaagagc
     1201 ccagtcgtta ttttttctcc attaccaatc aggcacaaaa aacccggcaa cctcagcaac
     1261 cgggttttat tgaattcaac tctaaattat cgcctggcgc ctaaaagatg gagcaatatg
     1321 ataaacaggt tcaagaagtc gagatagagg ctaagtgcgc ccataacggc tttcttggaa
     1381 gcggtttctg agtgctcacc ttcgacatac atgcgcttga tgttttgcgt atcatgcgcg
     1441 gttaggccga caaagaccaa gacgccgacg acggatataa caaaggccat cgccgaagat
     1501 tgcatgaata tattaaccac tgatgcaatg atgataccga tcagccccat aaacaggaaa
     1561 gaaccgaatt ttgataaatc acgcttggtg gtatagccat aaaggctcat tgaggcgaag
     1621 gtgccggcgg ttataaagaa tacccgggtg atactggtac cggtatagac caggaatata
     1681 tgggtcagag agaggcccat aattgcggca aaggcccaga acatagcctg tgccgttgag
     1741 gccttcattc gttgaatacc aaaactgagc accaaaatga acgccaaggg cgccagcata
     1801 ataatccagg caaacatggt tggctgcaaa gccccaccgg ggccagctgc atacattaag
     1861 ttcagcagcg ctgggatttt tgccccgcca taggcgaata taccggtcaa aacgaggccg
     1921 gaggccatat aattgtaaac ctggagcata tattgacgaa gcccaacatc caattcagat
     1981 gcttcggctt gcgcgagacc ttgcgtgcgt attgaataat cgtcgttttg tctaaaagcc
     2041 ataattttcc cttttattct ttaaagctgt acatacccct ctaatatgtc aggaaaggcc
     2101 tgagatcaag agaaaccgta ttaaattata gtaaggtcac gttaaattta aaaaggttaa
     2161 tcctttatat ttaagggata tttctcattc attgcgcagg agaggggcgg ctttttggcc
     2221 taaggcccac catgt
//
LOCUS       DASCNL010000426         1012 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000879857, whole genome shotgun sequence.
ACCESSION   DASCNL010000426 DASCNL010000000
VERSION     DASCNL010000426.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1012)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000879857"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(333..>1012)
                     /locus_tag="QF359_05790"
     CDS             complement(333..>1012)
                     /locus_tag="QF359_05790"
                     /inference="COORDINATES: protein motif:HMM:NF013132.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HJO86454.1"
                     /translation="PPDIEDIGPAHQVLRKKLDAMGDVSIKEKGIASVMILTLIAWLW
                     LGDKFGIANIALISIVMLFVLNLINWKMVEEHVNWGIILMYGGAICLGEVMSQSGAAL
                     WLATRTFEGTAHSAPVFLLIVAVFATVLTTFMSNSAAIAVLLPPALSMCDTYGISSSM
                     AAMAVILPSNFAFMLPVGTPASAIAYSSRFISVGEMIRTGSILSLLGMVAFAALLYLY
                     WPMIGYH"
BASE COUNT          276 a          242 c          254 g          240 t
ORIGIN      
        1 actctcgccg atgaaggcgt atttgtctgc ctgttttatg gtgctcataa gcggctgatt
       61 ttacattact aatagtaggg atgtcaattg gttgacgcta taaaaagcgg agcaatccgt
      121 cgttctcaat ttttttggag tctggaaaag gttcccgact ctgcaaattt tttttaaacg
      181 attaaaacga ggaaacaaaa aatgagaaaa ccgatcaaag cctatggtgg acatggccgt
      241 tccgcaattt ataaattcag cgaaggaaaa ttatagatag aacggaaaga atgcctcaca
      301 tactacatct tagtcatcgg gacgattatt gcctagtggt acccgatcat tggccagtag
      361 aggtacagca gggctgcaaa cgctaccata ccaagcagac tgaggatgga gccggtccgt
      421 atcatttctc cgacactgat gaaacgcgat gaataggcta tcgccgacgc gggtgtacct
      481 acgggcaaca taaatgcgaa gttacttggc agtatgactg ccattgccgc catggacgaa
      541 cttatcccgt aggtgtcgca catgctgagc gcgggtggaa gcaggactgc gatcgccgcg
      601 gaattactca tgaaggtggt gagcactgtc gcaaagaccg caacgatcag caaaaatacc
      661 ggggcactgt gagcggtgcc ttcaaaggtg cgtgtggcca gccaaagcgc ggcacccgac
      721 tgggacatga cttcgccaag gcagatggcg cctccataca taaggatgat gccccagttc
      781 acatgctctt caaccatttt ccaattgatc aggttgagca caaacaacat aacaattgag
      841 atcaacgcga tattggcgat gccaaattta tcgcccagcc acaaccaggc aatgagcgtc
      901 aggatcatca cactggcgat ccctttttct tttatgctga cgtctcccat cgcgtccagt
      961 tttttcctga gcacttgatg ggcgggtccg atatcttcga tgtccggcgg ga
//
LOCUS       DASCNL010000427         1145 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000881946, whole genome shotgun sequence.
ACCESSION   DASCNL010000427 DASCNL010000000
VERSION     DASCNL010000427.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000881946"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(149..>1145)
                     /locus_tag="QF359_05795"
     CDS             complement(149..>1145)
                     /locus_tag="QF359_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HJO86455.1"
                     /translation="QEVYRTLARLMATDLTVLITGESGTGKELAALALHNYGNRKNFP
                     FVAINMAAIPRELIESELFGHEKGAFTGATARSIGRFQQAEGGTLFLDEIGDMPAEAQ
                     TRLLRVLQEGEYTTVGGKTAIRADVRIVAATHRDLTQLIMQGLFREDLYYRLNVVPIR
                     MPPLKERREDIPELVKHFLAQSTEEGLPWKIVDAQALERLQTHQWPGNVRELENLVRR
                     LAALYSQETIGIDVIEAELSEAGPLINEERKSNGIGEAVEDHLKDYFSAHSGELPPAG
                     LYDRILKEVERPLIALTLGATRGNQLKAADLLGLNRNTLRKKIRDLNIPVTRTPK"
BASE COUNT          268 a          298 c          266 g          313 t
ORIGIN      
        1 ggggcaagcg ccagcgtttc accaaacttc gtaaggtttg gtaattaccg gtggtgccaa
       61 tatcagccgt ttgctcactc atttatttaa aaccgactgc catatctttt gttctaaact
      121 aaattttacc tgtttgacca ctaccaaact atttaggtgt tcgtgttacc ggaatattta
      181 agtcacggat tttcttgcgt aaagtgttcc ggttgaggcc caatagatct gccgccttca
      241 attgattgcc gcgtgttgcc cccaaagtga gagcgattaa tgggcgttca acctctttca
      301 aaatccggtc atataaacct gctggaggta gttcgccgct atgagcggaa aaataatcct
      361 tgaggtggtc ttcgacggct tcaccaattc cattactttt gcgttcttcg ttaatcagcg
      421 ggccagcttc ggacagttca gcctcaataa catcaatgcc gatggtctct tgagaataca
      481 atgctgctag ccttcggact aaattttcca actcgcggac gtttccaggc cactggtggg
      541 tttgcaaccg ctccaaggcc tgagcatcga cgatcttcca aggtaacccc tcttccgtcg
      601 attgggctag aaaatgtttc accaactccg gaatatcttc gcgcctttct tttagtggtg
      661 gcatccggat aggtacgacg tttaaacgat aataaaggtc ttcacggaat aaaccctgca
      721 tgatcagctg agttaaatct cgatgcgttg cagcaacaat acgaacatct gcccgaatag
      781 ccgttttgcc gccaacagtc gtatactctc cttcctgcaa cacgcgcaaa agtctggttt
      841 gcgcctccgc cggcatgtca cctatttcgt caagaaacaa agtaccgccc tcagcttgct
      901 ggaagcggcc aatcgagcgg gcggttgctc cggtaaaggc gcccttttca tggccaaata
      961 gttcactttc gatcaattcg cgcgggatcg ctgccatatt tatcgcgaca aatggaaagt
     1021 tttttcggtt gccgtaattg tggagagcca gtgccgcaag ttcctttccg gtgccggatt
     1081 caccggtaat aagtacggtc aggtcggtgg ccatcaggcg agccaaggtg cggtacacct
     1141 cctgc
//
LOCUS       DASCNL010000428         2840 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000886468, whole genome shotgun sequence.
ACCESSION   DASCNL010000428 DASCNL010000000
VERSION     DASCNL010000428.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000886468"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="QF359_05800"
     CDS             <1..572
                     /locus_tag="QF359_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86456.1"
                     /translation="VTFESLRGAMALVSQEITLFDDTIRANIAYGRPDASEDEIIEAA
                     KNAAAHDFIMEMPVGYDTYVGERGTKVSGGQRQRLAIARAMLKNAPILLLDEATSALD
                     TESERHVQSALTKLMQGRTTLVIAHRLSTVMDADLIHVINQGKLVESGSHTELIAQDG
                     IYARLYQLQFRDEVQQQAANNVQATAGGA"
     gene            579..1292
                     /locus_tag="QF359_05805"
     CDS             579..1292
                     /locus_tag="QF359_05805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HJO86457.1"
                     /translation="MATPVFIKTISRNNILQSFACLLGSLYIRFIHVTGNWRIENKDI
                     PEKLLSEGKTFITCFWHGRLMMMSYAWPYQPSFSMLISSHADGQLIAKTINRLGFDTL
                     VGSTKSGGSEALRAMVRKLKEGGYVGMTPDGPRGPRMRASSGAVALAKLAGVPILPLS
                     YSARSWKLFSSWDRFILPSPFSKGVFVWGEPIEISTDGNDATLETNRLDLENALTAVT
                     KQADDLCCQVTPEAEEAGQ"
     gene            1289..2581
                     /locus_tag="QF359_05810"
     CDS             1289..2581
                     /locus_tag="QF359_05810"
                     /EC_number="2.4.99.12"
                     /EC_number="2.4.99.13"
                     /inference="COORDINATES: protein motif:HMM:NF016311.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HJO86458.1"
                     /translation="MMLYLYRLTTILSAPLIHFFLNQRKARGKEDPARVDERFGKTDR
                     PRPSGPLYWLHAASVGESLSLLPLIDVLLADRPNCHLLMTTGTVTSAKLMQERLPDRA
                     FHQFIPVDRPSYVKRFLDHWRPDISLWAESDFWPNMIIETQLRGIPMILVNGRISPNS
                     FAGWQRARKVIKTLLQGFTLCLGQSDEDVDRLNQLGSRNTNNLGNLKFAVPALPADDQ
                     ELATLNSTIGDRPCWLAASTHPGEEEIIAEVHKQLKASHSGLLTVIVPRHPARGEDIA
                     KALQRMDINLAIRSKNNPLTTETGIYIADTMGELGLFFRLTDIAFMGKSLVPLGGQNP
                     LEALRLECAVIHGLHMANFQWMSEQMHESGCSIQVSNAAELGNAVSDLLTDASKRDQI
                     IRQGSAFIDSQSQVTERVAHEIETILDHHLTASENAAA"
     gene            2607..>2840
                     /locus_tag="QF359_05815"
     CDS             2607..>2840
                     /locus_tag="QF359_05815"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HJO86459.1"
                     /translation="MLSVLLAPAGWVYGLAGAIRQDRTQPWQAPVPVICVGNLVTGGQ
                     GKTPTSLSIGAALKTSGQNIHFLSRGYGGSLTEP"
BASE COUNT          670 a          749 c          738 g          683 t
ORIGIN      
        1 atgtaacgtt tgaaagctta cgcggcgcaa tggctttggt cagccaggaa atcacgctgt
       61 ttgacgatac cattcgtgcc aatatcgctt acggccgccc tgatgcctcg gaggatgaaa
      121 ttatcgaggc ggcaaaaaac gcggcagcgc atgatttcat tatggagatg ccagttggct
      181 atgacactta cgtcggcgag cgcggcacca aagtttccgg tggccagcgt cagcgtttgg
      241 cgattgcccg agcgatgctt aaaaacgccc ccattctgtt gttggatgaa gccacctcag
      301 ccttagatac cgaatctgaa cgccatgtcc aatccgccct caccaaattg atgcagggcc
      361 ggacaacgct ggttattgcc catcgtctgt cgacggtgat ggatgctgat ctgatccatg
      421 tcattaacca aggaaaatta gtcgagtctg ggtcgcacac tgagctgatt gcccaagacg
      481 gcatttatgc gcggctttat caactgcaat tccgggatga ggttcaacag caggcagcta
      541 acaatgtgca ggcaaccgca ggcggtgcgt aacccattat ggcgacaccc gtttttatta
      601 aaaccatatc gcgcaataat attttgcaat catttgcctg tctgctcggc agtctttata
      661 tccgcttcat tcatgtgact ggaaactggc gcattgaaaa caaagatatc ccggaaaaat
      721 tattgtctga gggaaaaacc tttatcacct gtttttggca cggccgcttg atgatgatgt
      781 cttatgcttg gccttaccag ccgtcgtttt cgatgctgat ctccagccat gcggatggac
      841 aactgatcgc caagaccatc aaccggttgg gctttgatac gttggtgggt tcgaccaaaa
      901 gcggcggcag cgaggcacta cgtgccatgg tgcgaaaatt gaaagagggt ggttatgtcg
      961 gcatgacacc ggatggtccg cgcggtccgc gtatgcgggc aagctcgggt gctgtcgctc
     1021 tagccaaact agccggtgtg cctatattgc ccttaagcta ttcggcacgc tcgtggaaat
     1081 tgttttccag ttgggatcgc tttatcctgc catcaccttt ttcaaaaggc gtgttcgttt
     1141 ggggcgagcc gattgaaatt tcaacggatg ggaatgatgc cacgcttgag actaaccgtc
     1201 ttgatttgga aaacgccctg acggcggtga ccaaacaagc agacgatctt tgttgtcagg
     1261 tgacccccga agcggaggaa gccggccaat gatgctttat ctctatcgct taaccaccat
     1321 tttaagcgca ccgctgatcc atttttttct caatcaacgc aaagcccgcg gcaaagagga
     1381 tccggcccgc gtcgacgaac gttttggtaa aaccgataga ccgcgcccat ctggtccgtt
     1441 gtattggttg catgcagcaa gtgtcggtga gagcctttcg ctgctgccct tgatagatgt
     1501 attactggct gaccgcccca attgtcatct gctgatgacc accggcaccg tgacttccgc
     1561 caagctgatg caagaacggt tgcctgaccg cgcctttcat cagtttattc cggtcgaccg
     1621 gccctcttat gtaaaacgat ttttagatca ttggcggccc gatatttcgc tttgggcgga
     1681 gagcgatttt tggccgaaca tgattatcga aacccaattg cgtggcattc cgatgatcct
     1741 ggtcaatggc cggatttcgc caaattcctt tgctggctgg cagcgcgcgc gcaaggtgat
     1801 taaaacgctg ctacaaggat ttacgctttg cctcggccaa tcggatgaag atgttgaccg
     1861 gctcaaccag ctgggttccc gcaacaccaa taatcttggc aatttgaaat tcgctgtacc
     1921 ggctttgccg gccgacgacc aagaactcgc caccttaaat tcaacgatcg gtgaccgccc
     1981 ctgttggctc gccgccagca cccatcccgg cgaagaggaa atcatcgccg aagttcataa
     2041 acaattaaaa gcctcccatt caggcctgct gaccgtgatt gtgccgcgcc acccggcacg
     2101 tggtgaagat atcgctaaag cgctacaaag aatggatata aatcttgcta tcaggagtaa
     2161 aaataacccc ctgacgactg aaaccggtat ttacattgcc gatacgatgg gtgagttggg
     2221 cctgttcttc cggctgaccg atattgcttt tatgggtaaa tccctggtgc cgctcggcgg
     2281 ccagaatccg ctggaagcac tccgcctcga atgcgcggtg atccatgggc ttcacatggc
     2341 aaattttcaa tggatgtccg agcagatgca tgagagtggc tgttcgattc aagtgagcaa
     2401 tgcggcagag cttggtaacg ccgtgtcaga tttactaaca gacgcaagta aaagggatca
     2461 aataatccgc caaggcagcg cttttataga ctcgcagtca caagtcaccg aacgcgtggc
     2521 acatgagata gaaaccattc tcgatcacca tttaacggca agcgaaaatg cagccgcctg
     2581 atttttggta taaccaaaga ggctccatgc tgtctgtctt attggcgcca gcaggctggg
     2641 tctatggact tgccggtgcc attcgccaag atcgcacaca gccctggcag gcaccggtcc
     2701 cggtcatctg cgtcggtaat ctggtgaccg gtgggcaggg taaaacgccg acctcacttt
     2761 caattggcgc ggcgttaaaa accagcggcc aaaacatcca tttcctcagc cgcggctatg
     2821 gcggctcgtt aacggagccc
//
LOCUS       DASCNL010000429         2134 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000887248, whole genome shotgun sequence.
ACCESSION   DASCNL010000429 DASCNL010000000
VERSION     DASCNL010000429.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000887248"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            225..1547
                     /locus_tag="QF359_05820"
     CDS             225..1547
                     /locus_tag="QF359_05820"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO86460.1"
                     /translation="MSDNKKIPTKNLPIKSAKIDRRQFIKSTAIGVGAAAISSSIGFP
                     AMAKSKTIKIGYVTPKTGPLAPFAEADSFAVSLAQKAFANGIKVGGATHPVKIIMKDS
                     QSNPNRAAAVASDLIVKDEVDVMLVSSTPETTNPVSDQCEVNEVPCVSTVAPWQPWFF
                     TRGGKPGVGFKWTYHFFWGLEDVISVFTNMWGKLDTGKVVGGMFPNDGDGNAWGDKKL
                     GFPPVLAKKGYKLIDPGRYQNLTDDFSAQISAFKSGGVDIVTGVMIPPDFTNFWIQAK
                     QQGFRPKAASIGKAILFPVVVEGLGESGHNLSSEIWWSPSHPFKSSLTGQSSAQLAHA
                     YTAATKKQWTQPIGFAHALFEVAADVIKRTQDVGSNAAVLDALTKTNINSVVGPIAWK
                     PGPFKNVAKTPLVGGQWRLGGKYKYDLVITSNETAPMIPAGGDMQPIT"
     gene            1728..>2134
                     /locus_tag="QF359_05825"
     CDS             1728..>2134
                     /locus_tag="QF359_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase"
                     /protein_id="HJO86461.1"
                     /translation="MKLFEPLNINGMVISNRVLVPAMVTRLSGEDGLVNEDIIDRYAR
                     YAEGEVGLIVVEAMAIHGAKAGPLLRISEDSFIPGHAELTKRIHDTSDSKVVPQIIHF
                     MKIARSGWRQTLDMLSPQEIEQIIEEFGNAVARA"
BASE COUNT          561 a          538 c          522 g          513 t
ORIGIN      
        1 ctcattgaac gcgccggctg cgttctggtt tatgaatcag gaagacccgt cgatatcgct
       61 gaacttatgg atcgcagccg cgttcctgaa accgtttttg ccggcaacaa agagatggtg
      121 gatattcttc gccagcaggt cacttatatc ggcaaatgat attaggaatt atcaacgaag
      181 aatcattaac aaatattgat tttaataata cggaggaggt tactatgtca gataataaaa
      241 aaataccgac taaaaatttg ccaataaaat ccgccaaaat tgatcggcgg caattcatta
      301 aatccactgc tatcggtgta ggcgccgcag ctatctccag cagcatcggc tttcctgcca
      361 tggcaaaatc aaagaccatt aaaatcggct atgtgacgcc caaaactggt cctttggcgc
      421 cttttgccga agccgatagt tttgccgtgt ccctggctca gaaagctttc gccaatggta
      481 tcaaggttgg tggagcgacc catcccgtta aaattatcat gaaagacagc caatccaatc
      541 ccaatcgggc ggcggcggtc gccagcgacc tgatcgtcaa agacgaggta gatgtcatgc
      601 ttgtgtcttc gacgccggag accacaaatc ccgtatccga tcaatgcgaa gtcaatgaag
      661 ttccttgcgt ctcgactgtc gcgccttggc agccttggtt cttcactcgt ggcggcaagc
      721 cgggcgtagg atttaaatgg acttatcact tcttctgggg tttggaagac gtcatttcgg
      781 tcttcactaa tatgtggggt aaattggata ctggcaaagt tgtcggcggc atgttcccca
      841 atgacggcga cggtaacgcc tggggtgata agaagctggg cttcccaccg gtacttgcta
      901 aaaagggcta taagttgatc gatccaggcc gctatcaaaa tctgacagac gatttctctg
      961 cgcagatttc cgccttcaag agcggcggtg tagatatcgt cacgggcgtc atgatcccac
     1021 ctgacttcac aaacttctgg attcaagcga agcagcaagg cttccgtccc aaggcggcct
     1081 ccatcggcaa ggcgatcctg ttcccagtgg tcgtcgaggg attgggtgaa agcggccaca
     1141 atctgtcgag cgaaatttgg tggagtccgt cccatccgtt taagtcctct ctcaccggac
     1201 agtcatccgc ccaactggcg catgcctata cggcggcaac gaaaaaacaa tggacccaac
     1261 ccatcggctt cgcccacgca ctgtttgaag ttgccgccga tgttatcaaa cgcacccagg
     1321 atgtcggcag caacgctgcc gtactagatg ccttgaccaa aaccaatatt aacagtgtcg
     1381 tcggtcctat cgcctggaaa ccaggcccct ttaaaaatgt cgcaaaaacg ccgttggtcg
     1441 gcggtcaatg gcggctgggc ggcaaataca agtacgatct cgtcatcacc tccaatgaaa
     1501 ccgcgccgat gatcccggct ggtggtgata tgcaaccaat tacctaaagg atgtattttc
     1561 gaccggccac ttattaagtg gccggtcgat taataatacg atgacatcgt ttaaatctca
     1621 cctaacctag agaccgcctt ggaaatacac agtttgatag gggtcctgaa gcaatcgatt
     1681 tcagcaacga caaatgaaaa aatttattta ttggagaact tgttaaaatg aaattattcg
     1741 aacccctgaa tatcaacggt atggtcattt ccaatcgggt tctggttccg gccatggtaa
     1801 cgcgtttatc gggcgaggat ggtttggtca atgaagacat catcgatcgt tatgctcgtt
     1861 atgccgaagg ggaagtcgga ttaattgtcg tcgaagccat ggcaatacat ggcgccaagg
     1921 cgggacctct tttgcgcatt agcgaagaca gcttcattcc aggccatgct gaattaacca
     1981 agcggattca cgacacatcc gattcaaaag tagtgccgca gatcattcat tttatgaaaa
     2041 ttgcccggtc cggctggcgc caaacccttg acatgctatc ccctcaggag atcgaacaga
     2101 ttatcgaaga attcggcaac gccgtagcgc gcgc
//
LOCUS       DASCNL010000430         1196 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000887849, whole genome shotgun sequence.
ACCESSION   DASCNL010000430 DASCNL010000000
VERSION     DASCNL010000430.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000887849"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1126)
                     /locus_tag="QF359_05830"
     CDS             complement(<1..1126)
                     /locus_tag="QF359_05830"
                     /inference="COORDINATES: protein motif:HMM:NF028199.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HJO86462.1"
                     /translation="MSSVYNLPAFKRWPKETSRGLLDGLRRLTYRSPLYSITLVGRAP
                     NRLFGTPPELMPGDAATGQIILAGNLICGGQRWPLIDMAHFPKQASDHWRAYVHGFAW
                     LSDLRAVGSDASRELARSHIIRWIDSYTRWSPLTWRADVLGQRLTNWLTHFGFFAGDA
                     PQEFYNLFFTEVVKQARHLNRIIMKSVTGPGRIQGLKGLIYCGVALPGYENYLHSGMR
                     HLENELDRQIFPDGGHYSRNPHIHMEVLADLVTLRETFVAAHINVPAWLTGAIERMVP
                     MLRALRHADGGLAFFNGASTGEPALIDTLLAKSEVKTRAISSAPHTGFHRLSAGRTTV
                     LMDTGAPPLETAHKWAHAGTLAFEMSAGKDRIIVNCGMPED"
BASE COUNT          313 a          298 c          323 g          262 t
ORIGIN      
        1 tatcttccgg catgccgcaa ttgacaataa tgcgatcttt gccggcactc atttcgaacg
       61 caagcgtgcc ggcatgagcc catttatggg ctgtctcaag aggcggtgcg ccggtatcca
      121 tcaacaccgt cgtccgtccg gcggaaagcc ggtgaaagcc ggtatggggt gcgctggaga
      181 tggcccgtgt tttgacctcc gattttgcca gtaaggtatc aatcaaagca ggttcaccgg
      241 tgctggcacc attaaagaag gcgagaccgc catcggcgtg acgcagggct ctcagcatcg
      301 gcaccatgcg ttcgatggca ccggttaacc aagccggcac attgatatgg gcagcgacaa
      361 aagtttcgcg gagagtcact aaatctgcca acacttccat atgaatatga ggattgcgtg
      421 agtagtgacc gccatcgggg aaaatctgcc ggtcaagttc gttttccaga tgacgcattc
      481 cgctatgcaa atagttttcg taacccggca gtgcaacacc gcaataaata agccctttaa
      541 gtccttgaat tcgccctggt ccggtcaccg atttcataat gatccgattg agatggcggg
      601 cttgtttgac gacttcggta aaaaataaat tatagaattc ttgcggcgcg tcgccggcaa
      661 aaaaaccgaa atgggtcaac cagttggtga gccgctggcc gagaacatcg gctcgccagg
      721 ttaatggcga ccatcttgta taagaatcaa tccaacgaat gatgtgactg cgggcaagtt
      781 cccgggaagc atcactaccg acggcgcgaa gatcactgag ccaggcaaat ccgtgcacat
      841 aggcgcgcca atgatcactc gcttgtttgg ggaaatgtgc catgtcaata agcggccagc
      901 gctggccacc acatattaaa ttaccagcga gtattatttg accggtagcg gcatctcccg
      961 gcatgagttc gggtggtgtg ccaaacaggc gatttggggc gcggccaacc agggtaatac
     1021 tataaagtgg actgcgatag gtgaggcgac gcaggccatc aagcaagccg cgagatgttt
     1081 ctttgggcca cctcttaaag gcaggcaaat tatagaccga tgacatcgac acttaatttt
     1141 tccgaaatat tgcgcaatct ggcgtaaaat taggccgaaa aggacaaaaa aatcgt
//
LOCUS       DASCNL010000431         1738 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000891259, whole genome shotgun sequence.
ACCESSION   DASCNL010000431 DASCNL010000000
VERSION     DASCNL010000431.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000891259"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..526)
                     /locus_tag="QF359_05835"
     CDS             complement(<1..526)
                     /locus_tag="QF359_05835"
                     /inference="COORDINATES: protein motif:HMM:NF024313.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO86463.1"
                     /translation="MPDAIQSIDIEDQVDEFEVAVPSPPELMKRRAKSHRGFIIGGSV
                     VIFFLLVAVFAPVLAPFDPYDQDLTRRLIPPVWDAAKGTWEHPFGTDALGRDYLTRLM
                     YGAQISLMIGFFAAAVSAIVGSCIGMIGGYFGGRIDNFVMYLINVKLDLPGLLVDISL
                     VSVFGGSILALILIL"
     gene            complement(538..1455)
                     /locus_tag="QF359_05840"
     CDS             complement(538..1455)
                     /locus_tag="QF359_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO86464.1"
                     /translation="MAKFLLHRLYIAILVAITVSVIAFGLLRLSGDLAAELAGEDASE
                     EEIALTAKQYGLDRPLYIQYFDWAGGALTGDLGRSLFTNEPVVEMIFERIGVTVKLAL
                     YAIFVSLVVAIPLGVMASVRPNTLIDRFSLGIAVFGQAIPNFYFALLLILLFGVKLRW
                     LPISGNDSFAHFILPAFTLGLGAMPQFMRLTRSGMLDVLDSDFIRTARAKGLNPRRVL
                     FKHALRNAVLPIVSLMAVVLGFLLGGTVIIESIFALNGVGFLAFESIMRQDFPVVQSI
                     VFILSLSYIVLTLLSDLINAQLDPRIRLG"
     gene            complement(1470..>1738)
                     /locus_tag="QF359_05845"
     CDS             complement(1470..>1738)
                     /locus_tag="QF359_05845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86465.1"
                     /translation="NGVERWHVDTPKCEPYFFRMHGCKICLSVCPLNAKGMSKEEFKP
                     MAKVIRETGDAKGMLALIKERTGIDYEAMEYNPEDEGRPRVETD"
BASE COUNT          537 a          441 c          393 g          367 t
ORIGIN      
        1 atagaatcaa tatcaacgcc agtatcgatc cgccaaacac tgacactaaa gatatgtcaa
       61 ctagcaggcc cggcaagtcc agcttcacat tgatcaaata catgacgaaa ttatctatcc
      121 ggccgccaaa atagccgcca atcatgccaa tgcaggagcc aacaatggct gatacggcgg
      181 cggcaaaaaa gccgatcatt aatgatattt gggcgccgta catcagccga gtcaaatagt
      241 cgcggcctaa ggcgtcggtg ccaaacggat gctcccaggt acccttggca gcatcccata
      301 ccggcgggat caagcgtctg gtcagatctt ggtcgtaagg gtcaaaaggt gccagtacag
      361 gcgcaaatac agcaacgagc aagaaaaaga taaccacgct gccgccgata ataaatccgc
      421 gatgtgattt ggcccggcgc ttcatcagct ccggtggtga cggtacggca acttcaaatt
      481 cgtcgacttg atcttcaata tctattgatt gaattgcatc cggcataata agtcgaccta
      541 acctaatcta attctgggat cgagctgggc attgatcaaa tctgacagca gcgtgagcac
      601 gatgtaagaa agtgaaagaa taaagacaat ggattgaacg acggggaaat cctgacgcat
      661 gattgattca aaagccagga agccgacgcc gttaagggcg aaaatcgatt caataataac
      721 cgtaccacca agcaggaaac ccagcaccac cgccatcaag gaaacaattg gcagaacggc
      781 attgcgcagc gcatgcttaa acaacacacg cctgggattt agtcctttgg cccgggcggt
      841 tctgataaaa tctgaatcga gtacatcgag cataccgctc cgggtcaggc gcataaactg
      901 cggcatggcg ccaagaccga gcgtaaaggc aggcaaaata aaatgggcga aactgtcatt
      961 gccggaaatc ggcaaccacc gcaatttaac cccaaagagc agaatcaaaa gcagcgcaaa
     1021 atagaaattt ggaatggctt ggccgaacac cgcaatgcca agcgaaaatc tatctatcag
     1081 ggtgttcggt ctaacggaag ccatcacccc caaagggatg gcaacgacta gagatacaaa
     1141 aattgcgtaa agcgccagct ttaccgtcac gccaatacgc tcaaaaatca tttcgacaac
     1201 tggctcattg gtaaacaatg aacgcccaag atcaccggtt aaagcaccgc ccgcccaatc
     1261 gaaatattgg atatataaag gccggtccaa gccatattgt ttagcggtga gcgcaatttc
     1321 ttcttccgag gcatcttcgc cggcaagctc ggcagccaaa tcacctgata agcgtaacaa
     1381 accaaaggcg atgaccgaaa ccgtgattgc caccaggatc gctatataaa gacgatgtag
     1441 taaaaatttg gccacactat tctcttttat taatcggttt cgactctcgg tctgccttca
     1501 tcctccggat tgtactccat ggcttcgtaa tcaatgccgg tgcgctcttt aattaaagct
     1561 aacatacctt tggcatcacc ggtttcgcga ataactttcg ccatcggttt aaattcttct
     1621 ttcgacatgc ctttagcatt taaggggcaa actgatagac aaattttaca accatgcatg
     1681 cggaaaaagt aaggttcaca tttaggcgta tcaacatgcc agcgctcgac accattga
//
LOCUS       DASCNL010000432         2506 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000893223, whole genome shotgun sequence.
ACCESSION   DASCNL010000432 DASCNL010000000
VERSION     DASCNL010000432.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000893223"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..774
                     /locus_tag="QF359_05850"
     CDS             <1..774
                     /locus_tag="QF359_05850"
                     /inference="COORDINATES: protein motif:HMM:NF015715.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HJO86466.1"
                     /translation="LAAAFGALSPFCSCGVIPLIAALLAVGVPLAATMAFWLSSPLMD
                     PSMFLLTASILGAQFAIAKTVAAISVGILGGTGIYLVQRFGLFENPLKTAPGSICGAS
                     SLTSGGNVNWQFWQESERRVVFKSEAISNFLFLAKWLTLAFILENLMLTYVPADMIVK
                     LVGGTGIMPIIISAIVAVPAYLNGFAALPLVGGLIEQGMNPAAGMAFLIGGGISCIPA
                     AVAVFALVKKPVFFSYLTIAILGAILSGLGYAAFLKFVA"
     gene            complement(781..2142)
                     /gene="gor"
                     /locus_tag="QF359_05855"
     CDS             complement(781..2142)
                     /gene="gor"
                     /locus_tag="QF359_05855"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004362 - glutathione-disulfide reductase
                     (NADP) activity [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HJO86467.1"
                     /translation="MSNYDYDLITIGAGSGGVRASRLAGGYGAKVAVCEEDRVGGTCV
                     LRGCIPKKLLIYGAHYADYMEDAVNYGWTIEGASHDWTKLIANKNTELDRLNGIYLRI
                     LRDNNVDLKEGRGVLVDDHTVEIAGERLTAENILIAVGGRPTMPDIPGIEQVITSNEA
                     LELPKLPKRVVIVGGGYIAIEFAGIFSSLGVEVTEIIRADNILRGFDIDMRTSLFEEM
                     EKRGIKILAETVVESIEKQGDTFSLRLGNDEILETDCVMYATGRRANSEGLGIEAAGV
                     ELNDNGSIIVDELNRTSQSHIYAVGDVTDRIQLTPVAIQEGHALADMLFNQDTRTTDY
                     TNVPSAVFSTPPIATVGLTEEQARAEFGEVDIYDSNFKPLVHTLTGRDERSVMKLIVE
                     PKSDKVIGCHMMGIDAPEIIQGVAIAMKCGATKAQFDATTGIHPSSAEEFVAMRSKRP
                     DPE"
BASE COUNT          590 a          673 c          574 g          669 t
ORIGIN      
        1 ctcgctgcag cctttggcgc cttatcgccc ttttgttcct gtggcgttat cccgctgatc
       61 gccgccttgc ttgctgtcgg cgtaccgctg gctgccacga tggcgttttg gctctcgtct
      121 ccgcttatgg acccctcaat gtttctactg acagcgagta ttcttggcgc ccagtttgct
      181 attgctaaaa cggtagcagc tatcagtgtc ggcatattgg gaggcaccgg catctatctc
      241 gttcagcgct ttggcctttt tgaaaacccg ctcaaaacag cgccagggtc aatctgcggc
      301 gcttcctccc tgacatccgg cggcaacgtt aactggcaat tttggcaaga aagtgaacgc
      361 cgggtggtat ttaagagcga agccatcagc aatttccttt ttctcgccaa atggctgacc
      421 ctggctttca tactggagaa tttgatgctg acttacgtgc cggcagatat gattgtcaaa
      481 ctggtcggcg gcaccggtat aatgccgatt attatttcag caattgtcgc tgtccccgcg
      541 tatctcaatg gctttgccgc cctgcctttg gttggtggtt tgatcgagca aggcatgaac
      601 ccggcagccg gcatggcctt tttgattggc ggtggcatta gctgcattcc cgccgccgtc
      661 gccgtttttg cactggttaa aaaacccgtt tttttcagct atctgaccat tgccattttg
      721 ggcgctatct tgtcaggcct cggctacgct gcttttttga aattcgtcgc ttaacgctgc
      781 tcactccgga tcaggccgct tcgagcgcat ggcgacaaac tcttccgccg acgatggatg
      841 gataccggtg gtggcatcaa attgagcttt ggttgcacca catttcatcg caatcgccac
      901 accctggatg atttccggcg catcaattcc catcatatga cagccgatga ctttgtctga
      961 tttgggctca acgatgagct tcatcaccga gcgttcatca cgtccggtta acgtatgcac
     1021 gagaggttta aagttggaat catagatatc aacttcaccg aattcagcgc gggcttgttc
     1081 ttcggtcagc ccgacggtgg cgatcggcgg ggttgaaaag acggctgacg gcacgttggt
     1141 gtaatcggtt gtgcgagtat cttggttgaa caacatatcg gccaaggcgt ggccttcctg
     1201 aatggcgacg ggtgtcaact gaatgcgatc cgtaacatca ccaaccgcgt aaatatggga
     1261 ttgcgacgtg cgattcagct catcaacaat aatcgagcca ttatcattca actcgacacc
     1321 ggcagcttcg ataccgagcc cttccgagtt ggcgcgccgc cctgtcgcat acatgacgca
     1381 atcggtttcc agaatctcat cgttgccgag acgtaggcta aaagtgtcac cttgcttttc
     1441 aatgctttca acaacagttt cagccaggat tttaatgcct cgcttttcca tttcctcgaa
     1501 caacgatgtc cgcatatcga tatcgaagcc gcggagaata ttgtcagccc ggatgatctc
     1561 cgtcacctca acaccaaggc tggaaaaaat tccggcaaac tcgatggcga tatagccgcc
     1621 gccgacaatc accacacgtt tcggcaattt cggcaattcc agcgcttcat tggaggtaat
     1681 aacttgttca ataccaggga tatccggcat cgttggccgg ccgccaacgg caatgagaat
     1741 attttctgcg gtgaggcgct caccagcaat ctcaaccgtg tgatcatcaa ccagcacacc
     1801 ccgtccctct ttaagatcga cattattgtc ccgcaatata cggagataaa tgccattcag
     1861 tcggtcgagc tcagtatttt tattagcaat cagcttggtc caatcatggc tcgcaccttc
     1921 aatggtccag ccataattaa ccgcatcctc catatagtcc gcataatggg caccataaat
     1981 cagcagtttt ttcggaatgc agccgcgcaa tacgcaagta ccgccaaccc ggtcctcttc
     2041 acagaccgca actttcgctc cgtagccacc ggcaagcctg gaagcacgga caccaccgga
     2101 cccggcccca attgtgatca ggtcataatc ataatttgac atgttttttg gagccctagt
     2161 tcattcttgg ttaaattttg acggagtata gcggatgatt ggaaaaaata aactactgtt
     2221 aatcttcaat aaccggtcat ttacccatca acttgattga ccttccagcc gctggaaagg
     2281 ttaaattgag attacaccat caagaccaaa tttaaattta aggcaagttt ggtctggctc
     2341 tttcgatcac cggcctttgc cggcacggac atcaaaatat aaattcaaca atgataatgt
     2401 aagtagaacc atcaaacaat atcccaagca tttttccgca taccgaaatt aatcttgtta
     2461 agcagctgaa taatcgtagg atttttcaag cccttctgat gtaata
//
LOCUS       DASCNL010000433         1044 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000900895, whole genome shotgun sequence.
ACCESSION   DASCNL010000433 DASCNL010000000
VERSION     DASCNL010000433.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000900895"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1044
                     /locus_tag="QF359_05860"
     CDS             <1..>1044
                     /locus_tag="QF359_05860"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HJO86468.1"
                     /translation="PGDGVVTGYGTINGRTVFVFSQDFTVFGGSLSETHAEKICKILD
                     QAMKVGAPIIGLNDSGGARIQEGVSALAGYAEVFARNVMASGVIPQISTIMGPCAGGA
                     VYSPAVTDFTFMVKDTSYMFVTGPDVVKTVTHEEVTQEELGGAMTHTSKSGAADLAFE
                     NDVDAIEQLRRFMDFLPSNNQEYSPIRPTDDPADRQEPSLDSLVPDSPNESYDVKELI
                     IKLVDEGDFFELQPNFAANMVTGFGRLEGSTIGIIANQPKILAGCLDIDASVKSARFI
                     RFCDCFNIPIILLVDVPGFLPGTAQEYGGLIRHGAKLLYAFAEATVPKVTLITRKAYG
                     GAYIVMGSKHLRGD"
BASE COUNT          228 a          256 c          282 g          278 t
ORIGIN      
        1 cctggtgatg gtgtggtcac aggttatggc acgatcaacg gtcggacggt attcgtcttt
       61 tcacaggatt tcaccgtgtt tggcggttcg ctatcggaaa cccatgccga aaaaatttgc
      121 aagatcttgg atcaagcgat gaaggtcggc gcaccaataa tcgggttgaa tgattcaggt
      181 ggagcgcgta tccaggaagg tgtctcagca ttggctggtt atgccgaagt gttcgcccgc
      241 aatgttatgg cctccggcgt tattccgcaa atctcgacta ttatggggcc gtgtgctggc
      301 ggcgcggttt attcgcccgc tgttaccgac ttcaccttca tggtcaaaga tacgtcctat
      361 atgttcgtca ccggtccgga tgtagttaag accgtgactc atgaggaagt cactcaagaa
      421 gaacttggtg gcgccatgac tcacaccagc aaatccgggg ctgctgatct ggccttcgaa
      481 aatgatgttg acgcgattga gcaactgcgc cgtttcatgg attttctgcc atcgaacaat
      541 caagagtatt cgccgatccg gccaaccgat gatccggccg accggcaaga accttcactg
      601 gatagtttag tgccggacag tccgaatgag tcttatgatg ttaaggagtt gatcatcaaa
      661 ctcgttgatg aaggtgactt cttcgaattg cagccgaact ttgccgccaa tatggttacc
      721 ggctttggcc gcctggaagg ctcaactatc ggcattatcg ctaatcagcc taaaattctc
      781 gccggctgtc tggatatcga tgcatccgtc aagtcagcgc ggtttatccg cttctgtgac
      841 tgctttaata ttccaattat tttactggtt gatgtgccgg gcttcctgcc gggcacggcc
      901 caagaatatg gcgggctgat ccgccatggc gccaagttgc tttatgcttt tgctgaggca
      961 accgtgccga aagttacttt gatcacgcgg aaagcctatg gcggcgccta tatcgtgatg
     1021 ggttcaaagc atcttcgcgg tgat
//
LOCUS       DASCNL010000434         2563 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000901275, whole genome shotgun sequence.
ACCESSION   DASCNL010000434 DASCNL010000000
VERSION     DASCNL010000434.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000901275"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(135..404)
                     /locus_tag="QF359_05865"
     CDS             complement(135..404)
                     /locus_tag="QF359_05865"
                     /inference="COORDINATES: protein motif:HMM:NF017021.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HJO86469.1"
                     /translation="MKKLLFGFLFLIVGFIAAVLAAPNFINWNEYRDVITDEINAATG
                     FNLEIRGDIKISILPSLALLINKIFFNLETLPSYERSSRHNASVF"
     gene            780..1013
                     /locus_tag="QF359_05870"
     CDS             780..1013
                     /locus_tag="QF359_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86470.1"
                     /translation="MRGRVMSLFGLIYRAGPALGPLLMGAASTNVGLQIPVAAGALIC
                     LIAVTVMSPKRKQLAAEMERGSTAATIAEAKTA"
     gene            1010..2293
                     /locus_tag="QF359_05875"
     CDS             1010..2293
                     /locus_tag="QF359_05875"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO86471.1"
                     /translation="MSNFGYFVSKLGDHGIGRVLRHRDFAIYALAGWVSNIGLWVQRT
                     ALFWLTWELTNSYSMLGAMAFAEAIMTILVMPYAGTLTDRFDRLKLARITQMALFSIG
                     ALFVILSGLDLLTIYILFGLVMINGVAEGFWTPLRMTMPPSLIPREDLPAGLGVSATL
                     FNLAQFVGPALGGIIVSLLGVTYAFAFNAASFLGYLFVLLIIKLRYEEVPSREHQGFI
                     KEFKAGLIYIAETPGLRRFLLISLAVSLFMRAYRDLFAGISDGIFGMGVEGLAILSSA
                     AGLGAMTTALFLGNFGKIKGLIRVIMIALFIAIVAQTVLATAKVFWVVVACAAILSGT
                     STYAGIGGQLLVQNTIHGAVRGRVMSVWGMILRGGPTSGAWVVGTLAGFSDLQFAFLT
                     ATTLFFLVWLWTVPRTNHMARNLERSAEERDAVAS"
     gene            complement(2320..>2563)
                     /locus_tag="QF359_05880"
     CDS             complement(2320..>2563)
                     /locus_tag="QF359_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO86472.1"
                     /translation="DGVTRRLRFEEDMMAAILSGSRKNPPFGLAGGGSGAPGKTTVIR
                     QDNSELELGPTDQAKMKAGDVIVIETPGGGGFGKPT"
BASE COUNT          594 a          594 c          628 g          747 t
ORIGIN      
        1 ctaaagatac tcttcgccac agcccaaaac aatacacgcc ggtaaaatta atgggattta
       61 atggtatttt tataatgtgc taacaatttg aaattcttgg aaaatcagat catacttata
      121 tcagctacaa aaaattagaa aactgaagcg ttatgtcgag atgaccgctc gtagcttgga
      181 agagtttcta aattgaaaaa gattttgttt atcagtagcg ctagagacgg cagaatactg
      241 attttaatat caccgcgaat ttccaaatta aagcctgtag cggcattaat ttcgtcggtg
      301 atgacgtctc gatattcatt ccaattaatg aaattaggcg ctgccagcac agctgcgata
      361 aatccaacga tcaaaaataa aaagccaaac aaaagctttt tcaatttagt aactctccta
      421 agctacgagc ggtcatctcg acataacgct tcagttttct aattttttgt agcttatata
      481 aatatggtct gattttccaa gaatttcaaa ttgttagcac attataataa taccattaaa
      541 tcccatttaa ttttaccggc gtgtattgtt ttggactgtg gcgaagagta tctttaggtt
      601 aagtattgaa aatgcgctga aaattattag aaattcattc ttctcaattc ttgcgccggt
      661 ttagatgaag cgcacatgtc gctggaattg actattttca ataaaacttt tacacgtaaa
      721 gataattaga accttgatca ttcggtgagt aattcccgca aaatacggtg gatggcacaa
      781 tgcgtggccg cgttatgtcg ttatttggcc tcatctatcg ggccgggccg gcgctgggac
      841 cgctattaat gggggcagca tcgactaatg tcggcctgca aataccagtc gctgccggtg
      901 ctctcatctg cttgatcgcc gttacggtca tgtcgcctaa acgcaaacag ctagcggcag
      961 aaatggagcg gggcagcaca gccgcaacta tagcagaagc gaaaaccgca tgagtaattt
     1021 cggctacttc gtctcaaaac ttggcgatca tggcataggc cgggtactcc gtcatcgcga
     1081 ttttgccatc tatgccttag ctggatgggt ttcaaatatt ggtttgtggg tccaaaggac
     1141 agcgctgttt tggctgactt gggaattgac caactcctat tctatgcttg gcgcgatggc
     1201 ttttgctgaa gcgattatga ccatacttgt catgccctac gccggcacgc tgactgatcg
     1261 ctttgatcgc ctgaaattgg cgcggattac tcagatggcg ctatttagca ttggtgcact
     1321 ttttgttatc ctctctggct tagatctgct cacgatctac attttgtttg gtctggtgat
     1381 gatcaacggg gtcgctgagg gattttggac accgctccgg atgaccatgc cgccaagcct
     1441 cattccacgg gaagatctgc ctgccggtct cggggttagc gccactttat ttaatctcgc
     1501 ccaatttgtc ggcccggcct tgggtgggat tatcgtctcg ttgctcgggg tgacctatgc
     1561 ttttgccttt aatgctgcca gttttctcgg ctatttgttt gtcctcttga tcatcaaact
     1621 gcgctatgaa gaagtgccat cacgggagca ccagggattt attaaagaat ttaaagcggg
     1681 cctgatctac attgccgaga cgcccggctt gcggcgcttc ttgcttatat cactggctgt
     1741 gtctttgttt atgcgggctt accgggattt gtttgccggg atttccgacg gtattttcgg
     1801 gatgggcgtt gaagggctag cgatcctgag ctcggcggcc ggattaggag caatgacaac
     1861 agcgttgttt ctaggtaact ttggtaagat aaaaggcctt atccgcgtca ttatgattgc
     1921 cctgttcatt gctattgtcg cccagaccgt gctggcaact gccaaggtat tttgggttgt
     1981 tgtcgcctgt gccgccatcc tcagcggcac atctacctat gcggggatcg gtggccaatt
     2041 gctggtgcaa aataccattc atggtgccgt ccgtggacgg gtaatgagcg tctgggggat
     2101 gattttgcgc ggtggtccga ctagtggtgc ctgggtggtt ggtacgctgg caggctttag
     2161 cgatttacaa tttgcctttc tgacagcgac aacattattc tttttagtct ggctgtggac
     2221 cgtaccgcgc accaatcaca tggctcggaa tctggaacgt agcgccgaag agcgagatgc
     2281 agtggccagt taggtgggct tcccaaatcc gccaccactc tatgttggtt tcccgaaccc
     2341 gccacccccg ggcgtttcga ttacgatcac atcgccggct ttcattttcg cttgatcggt
     2401 gggtcccagt tctaactcgc tgttatcctg ccttataacc gtagttttgc cgggtgctcc
     2461 tgagcctcca ccggctaggc cgaaaggtgg atttttcctt gagccggata ggatcgctgc
     2521 catcatatct tcttcaaagc gcaaacgccg ggtcacgcca tca
//
LOCUS       DASCNL010000435         1286 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000906717, whole genome shotgun sequence.
ACCESSION   DASCNL010000435 DASCNL010000000
VERSION     DASCNL010000435.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000906717"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            33..>1286
                     /locus_tag="QF359_05885"
     CDS             33..>1286
                     /locus_tag="QF359_05885"
                     /inference="COORDINATES: protein motif:HMM:NF004780.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HJO86473.1"
                     /translation="MLTPEPIHRSNQMYFEAVMKSHAESFVEADIRFGWELISFEDLE
                     DHVTAEIRNIARDETETVRCAYMAGCDGAQGMVRRQLGFKYTGRQSTGDRFYDGSMAS
                     IYVRSPIVKEIRNMKESWHYWTINPEGRTDFISLNGDDEFLLLSEMPPDLPLDQVDAE
                     EIFRIAVGAAIDVEIISVQEWVAGLAMVTDHYKKGRIVLAGDAIHLFTPSGGFGFNTG
                     IDDAANIGWKLAAMIEGWGGEKLIESYEIERHPIGVRNTTTSGQYANKIGSLKFPDFI
                     EEESARGKAARDVLREDLATFKEEFASLGIVLGARYDSSPLIINDGTLPPPDEPATYI
                     PSATPGGRMPHYWIGEKESVFDRLGEWFNLVRIGPDAPAVSDFEQAAKKLNMPMAVVQ
                     LDEAAAEEFYQARLLLVRPDQHVAWR"
BASE COUNT          313 a          289 c          362 g          322 t
ORIGIN      
        1 aaattagcaa tcctggtccc tggggggaga ccttgctgac cccggaacca atccaccggt
       61 ccaatcaaat gtactttgaa gcggtgatga aatcacatgc cgagagtttc gtcgaggctg
      121 atatccgttt cggctgggaa ttaatttctt ttgaggatct agaggatcat gttacggcgg
      181 aaattagaaa tatcgcgcgc gatgaaactg agaccgttcg ttgcgcttat atggcgggct
      241 gtgacggcgc tcaaggcatg gtccggcgtc aattggggtt taaatatacc ggccgtcaaa
      301 gcacgggcga tcgcttttat gacggcagta tggcgtcgat ttatgtgcgc tcgccaatcg
      361 ttaaagaaat tcgcaatatg aaggaatcct ggcactactg gacgattaat ccggaaggtc
      421 gcacggattt tatttcgctc aatggagacg atgagttttt attgctctcc gagatgccgc
      481 ccgacctgcc tcttgaccaa gttgacgctg aagagatttt ccgcattgcg gttggtgccg
      541 ccattgatgt tgaaatcatt tccgtgcagg agtgggtcgc cggtctggcg atggttaccg
      601 atcactacaa aaaaggccgc attgtcctgg ccggagatgc gatccatcta ttcacgccgt
      661 ctggtggctt cggttttaac actggtattg acgatgccgc caatatcggc tggaagctcg
      721 ctgctatgat tgaaggctgg ggtggtgaga aactaatcga aagttatgaa attgagcgac
      781 acccaatagg tgtaagaaac accacaacct ccggccaata tgcaaacaaa attggcagcc
      841 tcaagtttcc ggattttatt gaagaagaaa gtgcgcgcgg aaaagccgcc cgcgatgttt
      901 tgcgtgaaga tttagcgacc tttaaagaag aatttgctag tcttggcatt gtgttgggcg
      961 cacgttatga cagctcgcca ttgattatca acgatggcac attgccgccg ccggatgaac
     1021 cggcaaccta tattccgtca gcgacgccgg gtgggcgtat gccgcattat tggattggcg
     1081 aaaaagaatc ggtgtttgat cggctgggcg agtggttcaa tcttgtacga atagggcctg
     1141 atgcgccagc tgtgtcagat tttgaacaag ctgccaaaaa attaaatatg ccgatggctg
     1201 tcgtccaact ggacgaggcg gcggctgaag aattctatca ggcgagactg ttgctcgtgc
     1261 ggccagatca acatgttgcc tggcgg
//
LOCUS       DASCNL010000436         2217 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000906926, whole genome shotgun sequence.
ACCESSION   DASCNL010000436 DASCNL010000000
VERSION     DASCNL010000436.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000906926"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..540)
                     /locus_tag="QF359_05890"
     CDS             complement(<1..540)
                     /locus_tag="QF359_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HJO86474.1"
                     /translation="MFTDFFLTLRNAKVPVSLREYLTLLEAMKKDVAEYKVDDFYYLA
                     RSCMVKDERNLDKFDQVFGKCFEGLEFTSEEDLVAEIPEEWLRSLAERVMTPEEMAEI
                     EALGGFDRLMEELRKRLEEQDGRHEGGSKWIGTGGTSPFGANGYNPEGVRIGQDKGRH
                     GRAVKVWDKRQFKNLDDQVE"
     gene            complement(561..1406)
                     /locus_tag="QF359_05895"
     CDS             complement(561..1406)
                     /locus_tag="QF359_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HJO86475.1"
                     /translation="MKFSGTDNYVATEDLMVAVNGAIALERPLLVKGEPGTGKTVLAH
                     EIAEALGRPLIEWHIKSTTKAQQGLYEYDAVSRLRDSQLGDEKVHEISNYIKRGKLWD
                     AFSSDDLPILLIDEIDKADIEFPNDLLLELDRMEFHVYETSETIKAKQRPIVIITSNN
                     EKELPDAFLRRCFFHYIAFPDRDVMHEIVDVHYPDIQKNLVREALNAFYEMRDVPGLK
                     KKPTTSELLDWIKLLMVDDIPPEALRMKDGKDIIPPLYGALLKNEQDVHLFEKLAFIN
                     RQESN"
     gene            complement(1429..>2217)
                     /locus_tag="QF359_05900"
     CDS             complement(1429..>2217)
                     /locus_tag="QF359_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HJO86476.1"
                     /translation="RDNSEVSTRLMTPDEAIEAGATALFGEKYGDEVRVVAMGSTDGN
                     EAFSTELCGGTHARRTGDIGLFRIVSESAVAAGVRRIEAVTGAAAQSYIADEAKALSD
                     AAAVLKVSPADLPGRIESLLDERRKMEKEITELRRQMATGGGGGSASDIKEISGIKFA
                     GKTLDGVPAKDLKSLADDLKGQVGSGVVALISVNDGKASLVVGVTDDLAEKISAVDLV
                     RAGSEAVGGKGGGGRPDMAQAGGPDGGNADAAINAIEEAISASA"
BASE COUNT          523 a          643 c          476 g          575 t
ORIGIN      
        1 ttcgacctga tcatccaggt ttttaaactg gcgtttatcc cagactttaa ctgcccggcc
       61 atgacggcct ttatcctgac cgatccgcac cccttccggg ttataaccat tggcaccaaa
      121 gggagaagtg ccgccggtgc cgatccattt actgccgcct tcgtggcgac catcttgttc
      181 ttccaagcgc ttacgcaact cttccatgag cctgtcaaaa ccgccaagag cttcgatctc
      241 agccatttct tccggcgtca tgacgcgctc ggccagcgag cgcaaccatt cttcagggat
      301 ttcggccacc agatcctctt ctgaagtaaa ttcaagccct tcgaaacatt tgccgaaaac
      361 ttgatcaaac ttatcaagat tgcgttcgtc cttcaccatg cacgagcgcg ccaaataata
      421 aaaatcatca accttgtatt cggcgacatc ttttttcatc gcctcaagca acgtcaaata
      481 ttcccggagc gataccggaa ctttggcgtt tctaagcgtt agaaaaaaat cagtgaacat
      541 ggcttagccg tttctcaccg ttagttgctt tcctgacgat tgataaaagc caatttctcg
      601 aacaaatgaa catcttgctc gttctttagc agcgcaccgt aaagcggcgg aataatatcc
      661 ttaccgtctt tcatcctgag cgcttcgggc gggatatcat cgaccatcaa caatttgatc
      721 caatccagca gttcagaggt tgttggcttt ttcttgaggc ccggcacatc acgcatttca
      781 taaaaagcgt ttaatgcttc gcgcacgaga tttttttgaa tatccggata atgcacgtcg
      841 acaatttcat gcatcacgtc tcgatccggg aaagcgatgt aatgaaaaaa gcagcggcgc
      901 aggaatgcat ctggtaattc tttttcattg ttcgacgtaa tgatcactat cggacgttgc
      961 ttggctttga tggtttcact ggtttcatag acgtgaaact ccatgcggtc caattcaagc
     1021 aacagatcgt tgggaaattc gatatcggct ttgtcgattt catcgatcag caaaatcggc
     1081 aaatcgtcag aactaaaagc atcccacaat ttaccccgtt tgatataatt ggatatctca
     1141 tggactttct cgtcacccaa ttgggaatcc cgcaagcgcg atacagcatc atactcatag
     1201 agcccttgct gcgccttggt cgtcgatttg atgtgccatt caatcaaggg ccggccaagc
     1261 gcctcggcaa tctcatgagc gagcacagtt ttgcctgtgc cgggctctcc tttgaccaac
     1321 agcgggcgtt ccagcgcaat tgcgccattg accgctacca tcagatcttc ggtcgcgaca
     1381 taattatcgg tacctgaaaa cttcatatct taatatcctt tgatttaatt aagccgaagc
     1441 gctgatcgct tcttctattg cattgattgc cgcatcagca ttgcctccat ctggaccacc
     1501 ggcctgggcc atatcgggac ggcctccgcc acctttaccg ccaactgctt cagaaccggc
     1561 gcgcaccaaa tcgactgcac taattttttc cgccaaatca tcggtcaccc ctaccaccag
     1621 agaggcttta ccgtcattaa cgctgatcaa ggcaacgaca ccggagccaa cctggccttt
     1681 aagatcatca gccaggcttt tgaggtcttt tgccggcact ccgtccaggg ttttacccgc
     1741 aaatttgatg ccagaaattt ccttgatgtc cgaagcgctg ccaccaccgc cgccagtcgc
     1801 catttgacgc ctcagctcgg tgatctcttt ttccatctta cggcgctcat ccaacaggct
     1861 ttcgatccgg cccggcaaat cggcaggtga gactttcaag accgccgctg catcgctaag
     1921 cgctttggct tcatcggcta tatagctttg cgccgccgca ccggtgacag cttcaatacg
     1981 gcgcaccccg gcggcaacag cactttcgga aacaatccgg aacaatccga tatcgccagt
     2041 gcgtctagca tgggtgccac cacagagctc ggtcgaaaag gcttcgttac catccgtcga
     2101 tcccattgcc actactcgga cttcgtcacc atatttctca ccgaacaatg ccgtggcacc
     2161 tgcctcaatc gcttcgtctg gggtcatgag gcgggtcgag acttctgaat tatcacg
//
LOCUS       DASCNL010000437         2561 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000909513, whole genome shotgun sequence.
ACCESSION   DASCNL010000437 DASCNL010000000
VERSION     DASCNL010000437.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000909513"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..649)
                     /locus_tag="QF359_05905"
     CDS             complement(<1..649)
                     /locus_tag="QF359_05905"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390939.1"
                     /note="Catalyzes the reversible hydrolysis of the amide
                     bond within dihydroorotate. This metabolic intermediate is
                     required for the biosynthesis of pyrimidine nucleotides;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HJO86477.1"
                     /translation="MTGIWTAALPDEKLGQKAYVNVRLLDPATDLDVVCDAKGGLLTD
                     GEKIVEFGVDIFKDGTPDGVEIIDCGGHCLSPGLVDIRVQVREPGYEHKGTIESAGRS
                     ATAGGVTTMVCLPNTNPVIADMSQVEFVARRARKIGLAKIYPYAALTEDLAGEKLTEI
                     GILAEAGAVAFTDGDKTIANAQVLRRALSYARTFDLLIVQHPEESSLVSPGGMNSG"
     gene            complement(646..1617)
                     /locus_tag="QF359_05910"
     CDS             complement(646..1617)
                     /locus_tag="QF359_05910"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HJO86478.1"
                     /translation="MAKSPKNPPYPHRHLLGIEGLSVQEISHLLEKSNQYVGQNRLTD
                     KKIKILHGRTIINLFFEDSTRTRTSFELAGKRLSADVINMSVGSSSVNKGETLIDTAS
                     TLNAMHPDVLVVRAGLSGAVQLLAEKVNCAVINAGDGSHEHPTQALLDALTIQRRRGK
                     LQGLKIAICGDILHSRVARSNIYLLVTMGAQVRLVAPMTLLPSGAEKLGVEVFHDMKE
                     GLRDCDIVMMLRLQNERMQGNYFPSIREYFHFFGLDYEKLSVAKPDALIMHPGPANRG
                     VEIDSEVADDYSRSVIREQVEMGVAVRMACLDILSSNLQLEMQEGAE"
     gene            complement(1709..2167)
                     /gene="ruvX"
                     /locus_tag="QF359_05915"
     CDS             complement(1709..2167)
                     /gene="ruvX"
                     /locus_tag="QF359_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HJO86479.1"
                     /translation="MIYETILQLAEIITPNTRLLGLDVGSKTIGLAVSDSDLKIATAI
                     DTIRRSKFSKDFEHLVKIIEDRKIGGLVIGLPISMDGTEGPACQSIRQFGANIIERHE
                     FAIAFWDERLSTSAVQRFLTDEADMTRKRRSEVVDKLAATYILQGALDSL"
BASE COUNT          643 a          635 c          637 g          646 t
ORIGIN      
        1 ccccagaatt cattccaccc ggtgaaacta ggctcgactc ctcaggatgc tggacaatca
       61 gcaggtcaaa agtacgggca taactaaggg cgcgtctaag tacttgcgca ttggcgattg
      121 tcttatcacc atcggtgaaa gcgacggcac cagcttcagc aagaatgcca atctcggtta
      181 gtttttcacc ggccaaatct tcggtaaggg ctgcgtacgg atatatttta gcgaggccga
      241 ttttgcgcgc gcgccgggcg acgaattcga cttgtgacat gtcggcgatc accggattgg
      301 tgttgggcag gcaaaccatt gtcgtcacgc cgccggcagt cgccgatctt ccggcgcttt
      361 cgatggtgcc tttgtgctca tagccgggct ctctgacctg gacccggatg tcaacgaggc
      421 cggggctcag gcaatggccg ccgcaatcga tgatctcaac accgtccgga gtgccatctt
      481 taaatatatc aacgccaaat tcgacaattt tctcaccgtc tgtcagcaat ccacctttag
      541 catcgcacac cacatcaaga tccgtcgccg gatcaagcag gcggacattt acatacgctt
      601 tctggccaag cttttcatca ggcagggcgg ctgtccaaat gccagtcatt cagcgccctc
      661 ctgcatttcc agctggagat tgctggagag gatatcgagg caggccatgc gcacggcaac
      721 acccatttca acttgttcgc ggatcacact gcggctgtaa tcatcagcca cttcggaatc
      781 gatctcgaca ccacgattgg ccggccctgg atgcataatc agcgcatccg gcttcgccac
      841 tgatagcttt tcataatcaa gtccgaagaa gtggaaatat tcgcggattg acgggaagta
      901 attaccctgc atgcgctcat tttgcagccg cagcatcatc acaatgtcgc aatctctaag
      961 cccttccttc atgtcgtgaa acacttcaac gcctaatttt tcggccccgg acggcagcaa
     1021 cgtcataggt gctaccaatc tcacttgcgc tcccattgtc accagtagat aaatattgga
     1081 ccgtgcgacc cgggagtgca ggatatcgcc gcagatcgcg atcttaagcc cttggagttt
     1141 gccccggcgg cgctgaatgg tgagcgcatc cagcagtgcc tgagtgggat gttcgtggct
     1201 gccgtcgccg gcattgataa ctgcgcagtt caccttctct gccagcagct gcacggcacc
     1261 tgataagccg gcgcgaacga ccaggacatc cggatgcata gcattgaggg tcgaggcggt
     1321 atcgatcaag gtttcgcctt tatttaccga tgagctgccg accgacatgt taataacatc
     1381 agcgctcagc cttttgccgg caagttcaaa agatgtccgg gtgcgggtag aatcttcaaa
     1441 gaacagattg ataatcgtcc ggccatgcag gatcttaatt tttttatcgg taagacgatt
     1501 ctgaccaaca tactggttgg atttttctag aagatgggag atttcctgga cggaaagccc
     1561 ttcaatgcct aacagatggc ggtgcggata gggaggattt ttagggctct ttgccataaa
     1621 ggcgcactat agggtcgact tctgaataga gcaagtctcg atatagcgga aagaatgttt
     1681 tatttcagag gcctacccgt aaaaacgact agagcgaatc cagtgcgccc tgcaatatat
     1741 aggtcgctgc taatttatcg accacttcac tgcggcgctt gcgggtcata tcggcttcgt
     1801 cggtcaaaaa acgttggacc gccgaagttg ataagcgctc atcccaaaag gcgatggcaa
     1861 attcatggcg ctcgataata ttggcgccga actggcggat cgactggcat gctggacctt
     1921 cggtgccgtc catgctgatc ggcaggccga tcaccaagcc accaattttt cgatcttcga
     1981 taattttcac gaggtgctca aaatctttgc tgaatttaga gcggcggatg gtatcgatgg
     2041 ccgtggcaat ttttaaatca ctatctgata cagccagacc aattgttttg gagcccacat
     2101 caaggccaag cagccgcgta ttcggtgtaa taatttcagc aagttgtaag atggtttcgt
     2161 atatcatggg ttcaccatag cgatgtattc agagaattcg agatatttcg ctttttgttg
     2221 aaaaaggctg agctgttccg gcagtttggt atctaagcaa aagttcctat ttttaataat
     2281 tagatacttt cgaatagaga cttattctcg gggaagctta acaatgtata aaaatcaaga
     2341 gcttttggat acgtatctca gcgaaaacgt tacaaaggat gtcaacatct taaaacgtgt
     2401 tgtccaagga gatgtctatc ccgaaatttt acacgaagcc aagtccgtag aattaatgtt
     2461 ggaggtattt tgtcattcct gtttgaaaac aaagatactg ttcgttacca aattcaggaa
     2521 atgattcggg tggaacgtat tgtaaaagag acagatatcc a
//
LOCUS       DASCNL010000438         1500 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000911315, whole genome shotgun sequence.
ACCESSION   DASCNL010000438 DASCNL010000000
VERSION     DASCNL010000438.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1500)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1500)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000911315"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..794
                     /locus_tag="QF359_05920"
     CDS             <1..794
                     /locus_tag="QF359_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HJO86480.1"
                     /translation="SFQVTITRAIIKVQPVKWRVEGNIGVVQITHFNLRSEDALEDAV
                     DSIRAQLGSRLQGLVIDLRNNPGGLLNQSVAIADAFLNHGKIVSVRDRTGEVRGFEAH
                     LGDIAGGLPIVVLINRGSASASEIVAGALQDHRRATVMGVRSFGKGSVQTIAPLDWDG
                     ALRLTTALYYLPSGRTIQGSGVDPDLSVIGKQSSGGKREADLPNALKTAGQAGEVLAG
                     RQLQKDSCPEAGKNKKDKLLGCAVMFLRSGSQANFLALMNARKSL"
     gene            800..1099
                     /locus_tag="QF359_05925"
     CDS             800..1099
                     /locus_tag="QF359_05925"
                     /inference="COORDINATES: protein motif:HMM:NF024809.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO86481.1"
                     /translation="MQTLELYHSGLTTCSKRIRLCLWEKGLDYKSNYIELWNYKNINK
                     DYLQLNEVGVVPTLVHDGVLIRNSFVIAKYIEDVFPEPPLIPSSALVRAKMRFWT"
     gene            complement(1118..1408)
                     /locus_tag="QF359_05930"
     CDS             complement(1118..1408)
                     /locus_tag="QF359_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86482.1"
                     /translation="MDPIDDTQHHNFSERIFIVAHPGTITNGFIKTPQLLSNFRPRSF
                     KLLLIDAAIGKFLPAARWSGTGVAARMILFVVVIELIDHALQIGVISHRRRR"
BASE COUNT          354 a          362 c          424 g          360 t
ORIGIN      
        1 gcagttttca ggtcaccatc acacgcgcga tcattaaagt acaaccggtt aaatggcggg
       61 tggaaggaaa tattggtgtt gttcaaatca cccattttaa cttgcgttcc gaggacgcgt
      121 tggaagatgc ggtcgacagt atccgagctc aactaggctc gcggctgcag ggactggtca
      181 tagatctgcg caacaatcca ggcggtttgc tcaatcagtc tgtggcgatc gcggatgcct
      241 tcttaaatca cggcaaaatt gtttcggtcc gggaccgcac tggtgaggtt cggggctttg
      301 aagcgcatct cggcgatatt gccggtggcc tgccgatagt tgtgttgatc aatcgcggtt
      361 cggcctcggc ttcagaaatt gttgcgggcg cgttgcagga ccatcgccgc gccacggtta
      421 tgggagtgcg gtctttcggc aaaggctcgg tgcagacaat tgcgccgctc gattgggatg
      481 gtgccttgcg tttaaccacg gcgctctatt atttgccgtc aggacgtacg atccaaggct
      541 ccggtgttga tcccgattta agtgtaatcg gcaaacaaag cagtggtggc aagcgcgaag
      601 ccgatttgcc gaatgccttg aagacagcag gccaggccgg agaagttctc gctggccgtc
      661 aattacagaa agatagctgc ccggaggctg gtaaaaacaa gaaagataaa ctgctcggct
      721 gtgctgttat gtttttgcgt tccggctcgc aggcgaattt cttagccttg atgaacgcgc
      781 gtaagagcct ctaataccca tccaaacgct cgagctttat cacagcggtc tgacaacttg
      841 ttcgaaacgg atacgccttt gcctgtggga gaaagggctc gactataaaa gcaactatat
      901 cgagctgtgg aattacaaaa atatcaacaa agactatctg caattaaacg aggtcggcgt
      961 cgtgccgacc ctggtgcatg atggagtgct aatccgcaac tctttcgtga tcgccaaata
     1021 tatcgaagat gtatttcccg aaccgccgct tataccatcc tccgcgttgg tgcgcgccaa
     1081 gatgcggttc tggacctgaa ccgccgatga cctgcgttta tcggcgacgg cggtgactta
     1141 taacgccaat ctgcaaggcg tggtcgatga gctcaatgac gacgacaaac aagatcattc
     1201 tggcagcaac tcccgtgcct gaccatcgcg ccgctggcag aaacttgccg atggcagcat
     1261 cgatcaacag gagcttgaaa ctgcgcgggc gaaaattaga aaggagttgg ggtgttttga
     1321 tgaagccatt ggtaatggtc cctgggtgtg cgacgatgaa tattcgctcg ctgaaattat
     1381 gatgttgcgt atcgtctatc gggtccatga attagcatct gaaattgtaa aaccggaggt
     1441 ctgctcgcac gttgttgagt agcgcgaccg catgatggcc cgatcagctg ttgaatatgt
//
LOCUS       DASCNL010000439         1431 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000911517, whole genome shotgun sequence.
ACCESSION   DASCNL010000439 DASCNL010000000
VERSION     DASCNL010000439.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1431)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1431)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000911517"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1403)
                     /locus_tag="QF359_05935"
     CDS             complement(<1..1403)
                     /locus_tag="QF359_05935"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO86483.1"
                     /translation="MKNTGLRLRTPSNTGGGFGIKVAIFPYIVLMAVAARIAGKPVKW
                     VEDRLEHLSSATAAPNRVVEIEAAAMNDGKVTAFRLSQLDDYGAFLRAPMPGPLYRMH
                     GVATGSYEIPNLYVRNRLVMTNKSPSGMVRGFGGPQMYYAIERIMHRVALELNLDPLA
                     VISKNLVSANAFPYHAAAGAVFDSGNYQACVDMAVKEGKLDEILTRRDEARAEGRIYG
                     VGYAAVTEPTHSNMGYITTILTKEERAKRSPTQGTNSNATVSVDPFGGVSVSTDVPPM
                     GQGHATLLAQIVAEQLGLQPAEITCNMEIDTQKDKWSIAAGNYAARFTSGPAVAAQMA
                     AKMMRDKLAHIAAPNLNVPVEEVEFGNHLIFARDNPDNYLKFYRVAGTAHWSPGSLPE
                     GMEGGLSESAVWTPRQLTAPDDKDRINTSLVYGFNFDFCGIEIDRDTGEVRIDHYVTA
                     HDAGTILNPLIAHGQILG"
BASE COUNT          314 a          401 c          404 g          312 t
ORIGIN      
        1 cccaatatct ggccatgggc aatcaacgga ttgaggatcg taccggcatc atgggcggtg
       61 acgtaatgat cgatgcgaac ctcgccggta tcccggtcga tctcgatacc gcaaaagtca
      121 aaattaaaac cgtaaaccag cgatgtgtta atgcggtctt tgtcatcggg ggccgttaat
      181 tggcgcggcg tccaaacagc tgattcactt aagccgccct ccatgccctc gggcaagctg
      241 ccgggcgacc aatgagcggt gccagcaacg cggtaaaact taagataatt atccggatta
      301 tcgcgggcaa atatcagatg attgccaaac tcgacctctt cgaccggcac gttgaggttg
      361 ggggcggcaa tatgggcaag cttgtcacgc atcatcttag ccgccatctg agcagctaca
      421 gcaggaccac tggtaaagcg ggcagcatag ttaccggcgg cgatcgacca tttatccttt
      481 tgggtgtcga tctccatgtt gcaggtgatt tctgccggtt gcagtccgag ctgctcggcg
      541 acaatttgcg ccagtagtgt cgcatggccc tgtcccattg gtggcacatc ggtggagacg
      601 ctgaccccgc caaacggatc gacgcttacc gtagcgttgg aattggtgcc ctgggtcggg
      661 ctgcgtttgg ctcgttcttc cttggtcaag attgtcgtga tgtaacccat attggaatga
      721 gttggctcgg tcacagcggc atagccaaca ccataaatcc ggccctcggc gcgggcttcg
      781 tcgcggcgtg taagaatttc atcaagcttg ccttccttga cggccatatc gacgcaggct
      841 tggtagttgc ctgaatcaaa taccgcaccg gcagcagcgt gatacgggaa cgcgttggcc
      901 gacaccaagt ttttactaat caccgccaaa ggatcgaggt ttaattccaa ggcaacccgg
      961 tgcatgatcc gctcgatggc ataatacatc tgcggtccgc caaagccccg gaccataccg
     1021 gatgggcttt tattggtcat caccaggcgg ttgcggacat aaagattggg aatttcgtag
     1081 gagcccgtcg cgacaccatg catacggtag agcggtcccg gcattggcgc ccgcaggaag
     1141 gcgccgtaat cgtccagctg actgaggcgg aaagccgtaa ccttgccgtc attcatcgcc
     1201 gccgcttcaa tctcgacaac ccggttgggt gccgccgtcg ccgatgataa atgctcaagc
     1261 cggtcctcga cccattttac cggcttgccg gcgatgcggg ccgccaccgc catcaaaacg
     1321 atataaggga aaatggctac tttaataccg aacccgccgc cggtgtttga tggggtgcgc
     1381 aaacgcaggc cggtgttttt cacccgtagg gcacggcaca ttaccggatg a
//
LOCUS       DASCNL010000440         1653 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000911734, whole genome shotgun sequence.
ACCESSION   DASCNL010000440 DASCNL010000000
VERSION     DASCNL010000440.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000911734"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1048)
                     /locus_tag="QF359_05940"
     CDS             complement(<1..1048)
                     /locus_tag="QF359_05940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86484.1"
                     /translation="MDLILSEEQILLQQSAKTFVARNAGSQYWRNHRDDGGVLNRKIW
                     REIAEAGWLGILMPEESGGLDLGMTELALVLEQGGRELMLEPIAATSIALGAIARGDG
                     AAKSDLLAAILSGEQIFLPALQENFDGSDLGQTQTATTADGDGIRLSGSKRFIPAAAG
                     ADGFLVSAKGSKGLLLCVVKTDDLGVSLTIDETIDASGLAQLDLEDVPVPMAQVIATE
                     NLASELVAWINDRLIVATSAELLGAATKAFEITVEYLKVREQFDRPIGSFQALQHIAV
                     DEFINVEIAKSFVYRVCASMDFGQENSAMAAAVKASTSGGALSVAKNAIQLHGGIGYT
                     DEHDIGLYLKRVAAL"
     gene            complement(1061..>1653)
                     /locus_tag="QF359_05945"
     CDS             complement(1061..>1653)
                     /locus_tag="QF359_05945"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86485.1"
                     /translation="IDMKSPGITPRPITTIAGDDEFSEIFFEDVRVPRENMVGDPGNG
                     WRIANAVLVHERLKTGHPRYCQSALARTRKVAKVTGAFDSAAFRNRLAGLKIDVLAYT
                     ALFDHAVELTKQSQASDIEASIMKIKSLDILHEIVDLLVEAAGSSGPITGRFETPDGP
                     VDVTDLFLQSRHETIRGGTSQILRNVVAKRGLGLPS"
BASE COUNT          401 a          447 c          407 g          398 t
ORIGIN      
        1 cgagcgcagc gacccgtttt aaatacaatc caatatcatg ttcatcggtg tagccgatac
       61 ctccgtggag ctggatggcg ttcttggcga ccgacagggc gccgcccgaa gtgctggcct
      121 taactgcggc tgccattgcc gaattttctt gcccaaaatc catcgaggca caaacgcgat
      181 agacaaagga tttggcgatt tcgacattta tgaattcgtc gacagcaata tgctgcaacg
      241 cttgaaagct gccgatcgga cggtcgaact gctcacggac tttcagatac tccaccgtta
      301 tttcaaaggc tttggtagca gcgccgagca gctcggcgct ggtggcgacg atcaaccgat
      361 catttatcca ggcgacgagt tcgctggcca ggttttcagt agcgattact tgtgccattg
      421 gaacaggcac atcctccaag tccaattgag ccaatccact ggcatcgatg gtctcgtcaa
      481 ttgtcaatga cacgccgaga tcatcagttt tgaccacaca taaaagcaat cccttggagc
      541 ccttggcaga aactaaaaaa ccatcggccc cggcggcggc tgggataaag cgcttggagc
      601 ctgaaagccg aataccatcg ccatcggcag tggtggctgt ttgagtttga cctagatcgg
      661 acccgtcgaa attttcctgt aaggctggta gaaaaatctg ttcaccagac aaaattgcag
      721 ccagcaaatc gcttttggca gcaccgtcac ctctggcaat ggcacccagg gcaattgagg
      781 tggcggcgat cggctccagc atcaattctc ggccaccttg ttccaatacc agggctagtt
      841 cggtcatacc taaatccaga ccaccgcttt cttccggcat taggataccc agccaaccgg
      901 cttcggcgat ttctcgccag attttgcggt tcaaaacgcc cccgtcgtcc cgatgatttc
      961 gccaatactg tgaaccggcg tttcgcgcca caaaggtttt agcgctttgc tgtaaaagaa
     1021 tttgttcttc gctgagaatt aaatccattc actaactcct ttaggacggc agaccgaggc
     1081 cgcgcttagc gactacatta cgcagaattt gactggtacc gccacggatt gtctcgtgtc
     1141 ggctttgcag aaataagtca gtaacgtcga ccgggccatc aggtgtttcg aaccttcctg
     1201 tgatcggtcc tgaactccct gcagcttcca ccagcagatc gacaatttca tgcaaaatat
     1261 ccagagactt gatcttcatg atggaggcct caatatcact tgcctgggat tgcttggtta
     1321 attcgacggc atgatcaaac agtgctgtat aagccaaaac atcgattttg agaccggcca
     1381 ggcgatttct aaaagcggcg ctgtcgaagg cgccggtgac tttggcaacc ttgcgggtcc
     1441 tagccaacgc agattggcaa tagcggggat gacctgtttt gagccgttca tgaaccagca
     1501 ctgcattggc gatgcgccag ccattgccgg gatctccgac catattttcc ctgggcaccc
     1561 taacgtcttc aaagaatatt tcggaaaatt catcatcgcc ggcaatagtc gttatgggac
     1621 gcggtgtgat acccggagat ttcatatcaa taa
//
LOCUS       DASCNL010000441         1339 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000912623, whole genome shotgun sequence.
ACCESSION   DASCNL010000441 DASCNL010000000
VERSION     DASCNL010000441.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1339)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1339)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000912623"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="QF359_05950"
     CDS             <1..332
                     /locus_tag="QF359_05950"
                     /inference="COORDINATES: protein motif:HMM:NF028500.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HJO86486.1"
                     /translation="PEILFSIFSPVTKLTGVGPRIAKLIEKLAGEHVSDLLWHLPSGI
                     IDRRYAPKIAEARIGEIATMTVTVDQHLPPKSRRLPYKILCSDDTGNLTLVFFHARAD
                     YLLKILP"
     gene            345..>1339
                     /locus_tag="QF359_05955"
     CDS             345..>1339
                     /locus_tag="QF359_05955"
                     /inference="COORDINATES: protein motif:HMM:NF016724.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HJO86487.1"
                     /translation="MISGAIESYGEGIQIPHPDHVVEVKDRASIEAVEPVYPLTQGLS
                     LKVLSKAIKGALALVPELTEWLDGPYLTQQNWPSWNAALTQVHSPEDGTDLEPETLPR
                     QRLAYDELLANQLALALVRAHMKKQPGRPIGGTGELKQRVSRALPFELTNSQQEAVSE
                     IAEDMSSASRMHRLLQGDVGSGKTVVALLSMLQAVESGAQAALLAPTEILARQHLATI
                     EPLTKAAGIKVAILTGREKGKSREPILEGFASGDIGLAVGTHALFQEGVEFNDLALAV
                     IDEQHRFGVHQRLALTSKGKAVDVLVMTATPIPRTLTLTAYGDMEVSRLIEKPAGR"
BASE COUNT          330 a          371 c          344 g          294 t
ORIGIN      
        1 ggccagaaat actgttttcg attttttctc ccgtcaccaa gctgacaggc gtcgggccgc
       61 gcattgccaa gctcatcgaa aaactggccg gtgaacatgt cagtgatctc ctatggcacc
      121 tgccgagcgg catcattgat cgccgctatg caccaaaaat tgctgaagct cgcattggtg
      181 aaattgccac catgaccgtg acggttgacc agcatttacc ccccaaatcc cgccgtttgc
      241 cgtataaaat cctgtgttct gatgataccg gaaatctcac tttagtgttt tttcatgccc
      301 gcgctgatta tttgcttaaa attctgccgt aaggcgaaga acgcgtgatc agtggcgcta
      361 tcgaaagcta tggtgagggt attcagatac cccatcctga tcacgtcgtt gaagtgaaag
      421 accgggccag catagaagcg gttgagccgg tctatccgct gacccaggga ttatccttaa
      481 aagttttatc taaagcgatc aaaggcgcgc tggctttggt gcccgaatta accgaatggc
      541 tggacggacc atatttaacg caacaaaact ggccaagctg gaacgcagct ctcacccaag
      601 tgcactcgcc tgaagatgga accgatttag agcccgaaac cctaccacgg caacgcttgg
      661 cctatgatga actgctggcc aatcaactcg ctttagcact ggtgcgggcg catatgaaaa
      721 aacagcctgg ccgtcccatt ggaggcaccg gcgaacttaa acagcgagtt tcgagagccc
      781 tgccctttga gctgacaaat tcacaacaag aagccgtcag cgaaatcgcc gaagacatga
      841 gttctgccag ccggatgcat cgattactgc agggcgatgt cggcagcggt aaaaccgtag
      901 tggctctcct cagcatgttg caggcggtgg aaagtggcgc gcaggctgca ctgctcgcgc
      961 caacggaaat tctcgctcgc cagcatctcg ccaccattga gcccttaacc aaagctgccg
     1021 gtatcaaagt ggctatattg acgggccgcg agaaaggcaa atcccgggag ccgatactcg
     1081 aaggttttgc cagtggtgac attggtctcg ccgtcggcac ccatgccttg tttcaggaag
     1141 gtgttgagtt caatgatctc gccctcgcgg ttattgatga acaacacaga tttggcgtcc
     1201 accaacgcct agcactgact tccaaaggaa aagctgtcga cgtgctggtg atgacggcaa
     1261 caccgattcc ccgtaccctg accctcaccg cttatggcga tatggaagtc tcgcgcctaa
     1321 tcgaaaagcc tgccggacg
//
LOCUS       DASCNL010000442         2714 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000913536, whole genome shotgun sequence.
ACCESSION   DASCNL010000442 DASCNL010000000
VERSION     DASCNL010000442.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000913536"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1743)
                     /locus_tag="QF359_05960"
     CDS             complement(<1..1743)
                     /locus_tag="QF359_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bi-domain-containing oxidoreductase"
                     /protein_id="HJO86488.1"
                     /translation="MKQVIQSARSGDLTVKDVPAPAASKGEILVHSGASLISAGTERM
                     VVEFAKKSLTGKAKERPDLVKKVLSKAKTDGIMATIKAVLSRLDEPLPLGYSAAGTVI
                     AVGAGLEGNFRVGERVAIAGAGLANHAEINAVPENLAAPIPEGVSDEEAAFGTIGAIA
                     LHAVRNLDAKLGEVVAILGAGLVGQMAAQFLTLSGVRTLVLDYDQARLDLAAELGAEK
                     CLNLADSGIEQNALALTNRLGCDGILIAAATESSEPFATAAAIARDRARVCMVGLSGT
                     EFPYADFMKKELSIIVSRSYGPGRYDEDYEARGVKYPAGFVRWTETENLREVMRLLAS
                     PSPQKLDVSSLISHRFDIGTAEDAFKMVLEKSQPHMGVILTYPETVSEVPAKISPAAP
                     ESGDCVLGVIGAGNFAKAVLLPELKKLAGVRLHTLATKRGASADHAQETFGFEYATTD
                     EAAVLDNPDINAVVIATRHDSHAELTASALNAGKSVLVEKPLGLTREEIAAIRAAREN
                     STGFFQIGFNRRYAPLAQQAKAELIKIEGPRFMVFRINAGHIPGESWLHNAAEGGGRI
                     IGEMCHFIDLARYFT"
     gene            1898..2590
                     /locus_tag="QF359_05965"
     CDS             1898..2590
                     /locus_tag="QF359_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_256363895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:1931..1933,aa:Sec)
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO86489.1"
                     /translation="MTNYHLISFKTUPWVQRAVIVMRAKSVDFEVTYITKDSKPDWFL
                     EISPHGKVPVLKVDDDVLFESNAIAEFLDEMVPPQLHPTDPVKRARNRAWTDFTSDWS
                     RALGKVSYAKTKKDHAKGLEDLPKTLAKIEESLSRRENDGPYFNGDTLCLVDVAYAPF
                     LMRFNMVEKINPTNVLDDFPKIKAWSDALLSNDAVINSVSEDFDEVFRESLYKRESLA
                     AQILDEQSAAAE"
BASE COUNT          660 a          726 c          684 g          644 t
ORIGIN      
        1 agtaaaataa cgggcgagat cgataaagtg gcacatttca ccaatgatgc ggccgccgcc
       61 ttcagcagcg ttatggagcc agctttcgcc tggaatatgc ccggcgttta tccgaaacac
      121 catgaaccgt gggccctcaa tttttatcag ctcggctttg gcttgttgag ccaaaggggc
      181 atagcggcgg ttgaagccaa tttggaaaaa accggtggag ttttcacggg ctgccctaat
      241 ggcagcgatc tcctcacggg taagaccgag tggcttctcg actagcaccg atttacccgc
      301 gtttaaggcg cttgcggtca gctcggcatg gctgtcatgg cgagtcgcaa ttaccactgc
      361 attaatatct ggattatcca gcacggcggc ttcatcggtc gtcgcatatt caaagccaaa
      421 agtttcctgg gcgtgatctg ccgatgcccc gcgtttggtc gcgagcgtat gcaatctcac
      481 cccagccagt tttttcaatt ccggtaacag cacggctttg gcgaaattac cggcaccaat
      541 aacacccaac acacaatcac cggattctgg tgcagccggg ctaattttag cgggcacctc
      601 cgacactgtt tccggataag tcaggatcac gcccatatga ggttgagatt tttccagcac
      661 cattttaaag gcgtcttctg ccgtgccgat atcgaaacga tgagaaataa gcgagctgac
      721 gtccagcttc tgcggtgacg gtgacgccaa caaccgcatc acttcgcgta agttctcggt
      781 ttcagtccag cgcacaaaac ccgccgggta tttaaccccg cgggcttcat aatcttcatc
      841 atagcggccg ggcccataag agcgcgacac gatgatcgat agttcttttt tcataaaatc
      901 cgcatagggg aattccgtac cactgagccc gaccatacaa acccgcgccc ggtcccgggc
      961 gatagcggcg gcggttgcaa acggctcact tgattctgtc gcagcggcga tgagaatacc
     1021 gtcacagcct agtctgttgg ttaaggcgag tgcgttttgt tcaatgccgc tatctgcaag
     1081 gttgagacat ttttcagcgc cgagctcagc cgccagatca agccgcgcct ggtcataatc
     1141 gagaaccaag gtacggacgc ccgaaagggt taagaactgt gccgccattt ggccaaccag
     1201 acccgctccc aagatcgcga caacttcacc cagcttggcg tcaagattac gcacggcgtg
     1261 gagcgcaatg gcgccaatgg tgccaaaagc tgcctcctca tcgctgacac cttcggggat
     1321 tggggcggcg aggttttcag gcaccgcatt aatctcggcg tgattggcca gtccggcacc
     1381 ggcaatcgca acccgctcgc caacccggaa attaccttca agccctgcac cgacggcaat
     1441 tacggtgccc gctgcggaat agccgagggg caatggttca tcaagccggg acagcactgc
     1501 cttgatggtt gccataatgc cgtcggtttt ggctttactc agaacttttt taaccaaatc
     1561 aggccgttct ttagctttgc cggtgaggct tttcttggcg aattcaacca ccatgcgctc
     1621 ggtgcccgct gagatcagcg aggccccgct atggaccaga atttcacctt tgctggcagc
     1681 tggcgccggg acatctttga ccgtaaggtc gcccgaccgc gcgctttgaa taacttgctt
     1741 catatacgta gttttaccct gattcttatc gggattccaa ggtgttatat agttttcctg
     1801 attaattgaa agccctgctc taaagcgggt ctttaatagc cgttgaatag ctggggcgca
     1861 tatgtcacca tcctgccgtt aattagaggg gtaaataatg acaaactatc atttaatcag
     1921 ctttaaaacc tgaccatggg ttcagcgcgc cgtgattgtg atgcgcgcga aaagcgtcga
     1981 tttcgaagtc acctatatta ccaaagatag caagcccgat tggttcctgg aaatctcacc
     2041 acacggcaaa gtgccggtgc tcaaagtgga tgacgacgtg ctatttgaat cgaatgccat
     2101 cgctgagttc ttggatgaaa tggtgccacc gcaattgcac ccaacagatc cggtaaagcg
     2161 cgctcgcaac cgggcgtgga ccgattttac atcagattgg tcgcgggctt tgggcaaagt
     2221 aagctacgcc aagaccaaaa aagatcatgc caaaggcctt gaagatttac ctaagaccct
     2281 ggccaagatc gaagaatctc tgtcccgccg agaaaatgac gggccttatt tcaatggtga
     2341 caccttatgc ctggtcgatg tcgcttatgc gccgtttctc atgcgcttca atatggtcga
     2401 gaagatcaac ccaaccaacg tgcttgatga cttccctaaa atcaaggcct ggtccgacgc
     2461 attactgtcg aatgatgcag tgattaattc tgtatcagaa gactttgatg aggtgttcag
     2521 ggagagcctc tataaacgcg aatccttagc ggcacaaatt ctggatgaac aatcagctgc
     2581 ggcagaataa aaagatttaa aattaataaa ggctcaccag cacaacctgc gtgcctgatt
     2641 ttttgaacta atcgacagga tgtcccggac ctgctaaatc atgacctgtt aaactttgtt
     2701 tggttagctc ggac
//
LOCUS       DASCNL010000443         1560 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000915424, whole genome shotgun sequence.
ACCESSION   DASCNL010000443 DASCNL010000000
VERSION     DASCNL010000443.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000915424"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="QF359_05970"
     CDS             <1..194
                     /locus_tag="QF359_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86490.1"
                     /translation="ISDLPASLAAHKNVTLLPFEKAVQNAVTVLLLTDHREFKSTDLT
                     TALDGKKIIDTRGVWPIRS"
     gene            219..1289
                     /gene="gmd"
                     /locus_tag="QF359_05975"
     CDS             219..1289
                     /gene="gmd"
                     /locus_tag="QF359_05975"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HJO86491.1"
                     /translation="MAQKKAKKKAFITGVTGQDGAYLAELLLTKGYEVHGIKRRSSSF
                     NTGRVDHFYSDPHIEGANFFMHYGDMTDATNLIRLVQAVQPDEIYNLAAQSHVQVSFE
                     TAEYTANSDGIGPLRLLEAIRILGLEKTARFYQASTSELFGKVVETPQSETTPFHPRN
                     PYAIAKLYGYWITVNYREAYGMHASNGILFNHESPIRGETFVTRKITRAVAAIELGLE
                     DKLYLGNIDALRDWGHARDYVEGMWRILQQDKPDDYVLATGEQHSVREFVELSFAEIG
                     RKIVWRGSGIDEQGVDDNTGDVLVEIDPRYFRPTEVETLLGDPSKAREKLGWQHTTPF
                     VELVSDMVKSDLELMRNGVDGQ"
     gene            1279..>1560
                     /locus_tag="QF359_05980"
     CDS             1279..>1560
                     /locus_tag="QF359_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJO86492.1"
                     /translation="MDSNTTEIKLADPFKIAGKKVWVAGASGMVGGATVRRLASEDCE
                     IWTPSHRELDLIDQAAVNQWLAANKPDVVVIAAATVGGILANSTRPAEFI"
BASE COUNT          402 a          385 c          397 g          376 t
ORIGIN      
        1 atatatctga tctgccggct tccttggcag cgcacaaaaa cgttacgctt ttaccttttg
       61 agaaagccgt gcagaatgcc gtgacagtgc tcttattgac cgaccaccgc gaatttaaat
      121 ccacggatct gacaacggca ctggacggca agaaaattat tgatacccgc ggcgtttggc
      181 cgataagatc ataattttaa aatttgggag tttttaattt ggcccagaaa aaagcaaaga
      241 aaaaagcctt tatcaccggg gttaccgggc aggatggtgc ctatctagct gaattgttgt
      301 taaccaaggg ttatgaagtg catggtatca aacgccgatc atcatccttt aataccggtc
      361 gcgttgatca cttttattcc gacccccata tcgagggcgc caattttttc atgcattacg
      421 gcgatatgac cgacgcgact aatttaatcc ggctcgtaca ggcggttcag ccggatgaaa
      481 tttataatct cgcggcgcaa agccatgttc aagtgagctt cgaaacagca gaatacaccg
      541 ccaattcgga tggcataggc cccttgcgtt tgcttgaggc gattaggatt ttaggcctcg
      601 aaaaaaccgc tcggttttat caggcctcaa cctccgaact ctttggtaaa gttgtcgaga
      661 caccacaatc tgaaaccaca ccgttccatc ctcggaaccc ttacgccatc gccaagctct
      721 atggctactg gatcacggta aactaccggg aagcctatgg catgcacgcg tctaacggta
      781 ttctgtttaa tcatgaaagc ccaatccgag gtgaaacttt tgtcacccgc aaaataactc
      841 gcgccgtcgc agccattgaa ctgggccttg aggacaaact ttatctcggc aacatagatg
      901 ccctcagaga ttggggtcac gccagggatt atgttgaagg aatgtggcgt atcctccagc
      961 aggataaacc ggatgattat gttttggcga cgggtgaaca acattcggtt cgggaattcg
     1021 tcgaactgtc attcgctgaa attggccgca aaatagtatg gcgcggcagt ggcatcgacg
     1081 agcagggcgt ggatgacaac accggcgatg ttttggttga aatcgatccc cgctatttcc
     1141 ggccgaccga agttgagact ttgttgggtg atccttcgaa agcccgcgaa aagcttggct
     1201 ggcagcacac cacgcctttc gtggaactgg tcagcgacat ggttaaaagt gatcttgaat
     1261 taatgcggaa tggcgttgat ggacagtaac acaactgaaa ttaagctcgc tgaccccttc
     1321 aaaatagccg gtaagaaagt ctgggttgct ggcgcgtccg gcatggtcgg tggcgccacg
     1381 gtacggaggt tggccagcga agactgcgaa atttggacgc cctcgcatcg cgagcttgat
     1441 ctgattgatc aggccgccgt taatcaatgg ctggcagcca acaaacccga tgtggtggtc
     1501 atcgcggcag caacagtcgg tggcattctc gccaattcaa cccgaccagc tgaatttatc
//
LOCUS       DASCNL010000444         5240 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000915698, whole genome shotgun sequence.
ACCESSION   DASCNL010000444 DASCNL010000000
VERSION     DASCNL010000444.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5240)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5240)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5240
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000915698"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..467
                     /locus_tag="QF359_05985"
     CDS             <1..467
                     /locus_tag="QF359_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HJO86493.1"
                     /translation="RITSDYYCMDGTIPRARLPEVLKRMEEMSEKYELRVANVFHAGD
                     GNLHPLIMYDANVPGELERAEDFGSDILKLCVEVGGVLTGEHGVGVEKRDLMGTMFTE
                     EDLNQQQRVKCAFDPDSLLNPGKVFPTLHSCAELGRIHVHHGHTRFPDIPRF"
     gene            479..1702
                     /gene="glcE"
                     /locus_tag="QF359_05990"
     CDS             479..1702
                     /gene="glcE"
                     /locus_tag="QF359_05990"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcE"
                     /protein_id="HJO86494.1"
                     /translation="MTDRLLPQTKKNVLDIIRAANDDKQTLEIIGAGSKCDWGRPVNS
                     TALLDLTNLTGITLYEPAELVLSAAAGTSMMEIQQALAEENQQLAFEPPDFSSLYGGN
                     NSGTLGGTIAANLSGSKRLQAGAARDHFLGFEAVSGRGEEFKSGGRVVKNVTGFDLSK
                     LLAGSFGTLAAMTTVTVKVLPKPDKTRTVLLYGQDDQAAIKALSETLQGPFEINSAGH
                     LPADIAAKSAVSYIASSGGSVTAVRVQGPEPSVEVRCRAVRALWQASGEVEELHSHNS
                     KILWQEVRDIAKLLSNTEDQIWRLSVPPSAGAGVVTAITSQLKGEYYYDWGGGLIWLA
                     LDGKTENSATILRQVVDNSGGHATLVRGSEEFRSKVEVFHPQPEELARLSHNIKFSFD
                     PGGVLNPGKMYKADG"
     gene            1709..3004
                     /gene="glcF"
                     /locus_tag="QF359_05995"
     CDS             1709..3004
                     /gene="glcF"
                     /locus_tag="QF359_05995"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcF"
                     /protein_id="HJO86495.1"
                     /translation="MKTEFTADQRANPIIQEIEDNLRKCVHCGFCQSDCPTYSVLGDE
                     RDSPRGRIYLIKDMLEQGGAPNPEIVSHIDRCLSCLACMSACPSGVHYQHYIDHARAY
                     VEEHHQRPWIDGALRVVLAVILPHAGRFRLALSLAKIVKPVAFLFGSKLAAMINMAPA
                     HIQKPTLTVGSKIYPAEGVRKKRVALMLGCAQKVLRPSINEATIRLLTRLGCEVVVSK
                     DVGCCGALTHHLGKDDAARDFARANIDAWIREIEGKGLDAIVINAAGCGTEVKDYSYL
                     FKEEADYREAAQKISDLSKDISEIIADLELPSSGVANLPAVIYHDACSLMHGQGITES
                     PRQQLRRAGFSVVEIPDRHYCCGSAGSYNLLQPEMAGQLKDWRISGIDDVLSESSAQI
                     LVTGNIGCLVQLASGTDIPIVHTVELVDWATGGPIPDNL"
     gene            3050..3301
                     /locus_tag="QF359_06000"
     CDS             3050..3301
                     /locus_tag="QF359_06000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86496.1"
                     /translation="MGKFGLRGHAQSKAHELHPQNIHVVHVVVEGGIRSVKRDRVDGN
                     GDDGWLLSEAIADTYYHFHTQHRSAWLWEIEVRPWVESF"
     gene            complement(3302..3547)
                     /locus_tag="QF359_06005"
     CDS             complement(3302..3547)
                     /locus_tag="QF359_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2312 domain-containing protein"
                     /protein_id="HJO86497.1"
                     /translation="MADVGGIASERLRTIIERIERLEEEKAALAEDIREIYSEARVAG
                     FDAKIIRQLIRLRKLDGADRREQEELLDLYKRALDME"
     gene            3642..3800
                     /locus_tag="QF359_06010"
     CDS             3642..3800
                     /locus_tag="QF359_06010"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HJO86498.1"
                     /translation="MPATFGSVGLLLQPALATIIAWFLFAESPSLLQLLGVLIVIVGI
                     YFTRRGTR"
     gene            3918..4898
                     /gene="egtD"
                     /locus_tag="QF359_06015"
     CDS             3918..4898
                     /gene="egtD"
                     /locus_tag="QF359_06015"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:TIGR03438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HJO86499.1"
                     /translation="MLGDQIEGIGYFVDLQPETEDFLATVLDGLSQQQKSIPPKFFYD
                     DKGSKIFDQICEAPEYYIARTEIALMNNIAAEINTLVEPGSIVVEYGCGSSMKIRALL
                     SALPDPAEYLAIDISKSHLISTVKEIAADYPKIRVGAICADFSDALSWPKGANADRDQ
                     RLAFFPGSTIGNQTPEEARQFLERVRHLVGARGNLLIGVDLKKDTDVLNKTYNDVAGY
                     TADFNLNLLHRIKAELGGKLDISTFEHNAFYNEDLGRIEMHLISQLDQSIEIGGQQFN
                     FRKGESIHTENSYKYSIDEFLELAGCAGFGSVKTWTDADNYFSIHYLAAK"
     gene            complement(5022..>5240)
                     /locus_tag="QF359_06020"
     CDS             complement(5022..>5240)
                     /locus_tag="QF359_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86500.1"
                     /translation="GDTSQELEPGTLVYFPPGVPHRLRAHNGSLDYFEIQAWRSFQTN
                     ILSEEKLGLRWYYAPEMPDAERVEWNQS"
BASE COUNT         1255 a         1204 c         1397 g         1384 t
ORIGIN      
        1 gccgtattac ctccgattat tattgtatgg atggcacaat acctcgggcg cgactgccgg
       61 aagttctcaa acgcatggag gaaatgtcgg aaaaatatga gcttcgtgtt gccaatgtat
      121 tccacgccgg tgacggtaat ctgcacccgc taattatgta tgatgccaat gttccaggag
      181 agcttgagcg ggcagaagac ttcggctcag atatcttaaa gctctgcgtt gaagttggcg
      241 gcgtgctgac cggcgagcat ggtgtcggtg ttgaaaaacg cgatcttatg ggcacgatgt
      301 ttaccgaaga agacctcaac cagcaacagc gcgttaaatg cgcctttgat ccggacagtt
      361 tgctaaatcc gggtaaagtt ttcccgacgc tgcacagctg tgctgagctg ggccgtatcc
      421 atgtccatca tggtcacacc cgttttcctg acatcccgcg gttttaggag gctgagccgt
      481 gacagaccgc ctgttaccgc aaaccaaaaa gaacgtgctg gatatcatcc gggccgccaa
      541 tgatgacaag cagacactgg aaattattgg ggctgggtca aaatgtgatt gggggcgtcc
      601 agttaattcc acggcgctgc ttgatctgac aaatttaact ggtatcactt tgtatgagcc
      661 ggctgagttg gttttatctg ccgccgccgg gacttcgatg atggaaattc aacaggcatt
      721 ggcagaagaa aatcagcagc tcgcttttga accgccggat ttctcgtcgc tttacggcgg
      781 taataacagt ggcacgctgg gcggtactat cgccgctaat ttgtccggct caaagcgctt
      841 gcaggcgggc gcggcccgtg atcatttcct cggctttgag gctgttagtg gacgcggtga
      901 ggaattcaaa tccggcggcc gggtggttaa aaatgtcact ggtttcgatc tttcaaaact
      961 gctagcggga tcttttggga ccttggccgc gatgaccaca gtaacggtga aagttttgcc
     1021 gaaaccagac aaaactcgaa cggttttgct gtacgggcag gatgaccaag cggcgatcaa
     1081 agctttgagt gaaaccttgc aggggccctt tgaaattaat agcgctggtc atttaccggc
     1141 tgatattgcg gccaaatcgg cagtttcata tatagcatca tccggcggtt cggtcaccgc
     1201 cgtgcgtgtc caaggaccag agccctcggt cgaagttcgg tgccgggccg tgcgggcatt
     1261 gtggcaggct agcggcgagg ttgaagaatt acatagccat aattctaaaa tcctatggca
     1321 ggaagtacgc gatattgcca aattgttgag caatacagag gatcaaattt ggcggctttc
     1381 ggtgccgccc tcagcgggtg ctggcgttgt aaccgctatt accagccagc ttaaaggcga
     1441 gtattattat gattggggtg gtgggctcat ttggttggcg cttgatggaa agaccgagaa
     1501 ttcggctaca atccttcgac aggtagtgga caattccggc ggccatgcga ctttagtgcg
     1561 gggcagtgaa gagttccgca gtaaagttga ggtgtttcat ccacaacccg aagaacttgc
     1621 tcgcttgagc cacaatataa aattcagttt tgatcctggc ggtgtgctca accccggcaa
     1681 gatgtataaa gcggatggat gacggctaat gaagaccgaa tttaccgccg atcagcgcgc
     1741 caatccgata atccaggaga ttgaagataa tcttcgtaaa tgtgttcatt gtggattttg
     1801 ccagtctgat tgcccgactt attccgtctt aggagatgaa cgggatagtc cgagaggccg
     1861 gatatacctg attaaagata tgctggagca aggtggggcg ccaaacccgg aaatagtgtc
     1921 ccatatcgac cgctgcttat cttgtctggc gtgtatgtcg gcatgtccat cgggcgtgca
     1981 ttatcagcac tacattgatc atgcccgggc ctatgtcgaa gagcatcacc agcgtccgtg
     2041 gattgacggt gcgctccgtg ttgtcttggc ggttatctta cctcatgccg gtcgctttcg
     2101 tctggcgctc agtcttgcca aaatcgtcaa accggtggct tttttattcg gcagcaaatt
     2161 ggccgccatg atcaatatgg cgcctgccca tatccagaaa ccaaccctca ctgtggggtc
     2221 aaaaatctat ccggctgagg gtgtgcgtaa aaagcgcgtg gcgctaatgc tgggctgcgc
     2281 gcagaaagtg ttgcggccct caatcaatga agcgacgatc cgactgttga cgagactcgg
     2341 ctgtgaagtt gtggtctcca aagatgttgg ctgctgtggc gctttaactc accatcttgg
     2401 caaagacgat gcagcgcgtg attttgccag agcaaatatt gatgcctgga tccgcgagat
     2461 cgaaggtaaa gggctggatg ccattgttat taatgctgct gggtgtggca ccgaagtcaa
     2521 agactacagt tatttattta aagaagaagc ggattatcgc gaggcagcgc aaaaaatatc
     2581 cgatctcagt aaagatatat cggaaattat cgccgatctg gaactgccat cttcgggggt
     2641 agccaattta ccggccgtga tctaccatga tgcttgttcg ctcatgcatg gccaaggtat
     2701 taccgaatcg ccacgccagc agttacgacg tgccggattt agtgttgtcg agattcccga
     2761 ccgtcattat tgctgcgggt cagcgggcag ctataatctt ttgcagccgg aaatggccgg
     2821 gcagttgaag gactggcgga tcagtggaat tgatgacgtg ttgtctgaaa gcagcgcaca
     2881 aattctggtg accggcaata ttggctgcct tgtccaattg gcaagcggaa cggatatacc
     2941 catcgtacac accgtggaat tggtggattg ggccactggt gggcccatcc ctgataattt
     3001 gtaacatcaa attaatgttg gattttttat ttgatcggcc acgtttgcta tgggtaaatt
     3061 tggcctccgt ggtcatgcac aaagtaaggc acacgaactc catccgcaaa atatccatgt
     3121 cgttcacgtt gtcgtcgaag gcggcatccg ctcggtcaaa agagaccggg ttgatggcaa
     3181 cggtgatgac ggctggctgt tgtcggaagc gattgccgat acgtattacc atttccatac
     3241 ccagcatcgc tcagcatggt tgtgggaaat agaagtcaga ccttgggtgg aaagttttta
     3301 gctattccat atctaatgcg cgtttataaa gatcgagcaa ttcttcctgc tcgcggcgat
     3361 ctgccccatc taatttgcgt aagcggatga gctggcggat gatttttgca tcaaatccag
     3421 ccaccctggc ttccgaatag atttcgcgga tatcttcggc gagggcggct ttttcttctt
     3481 caaggcgctc aattcgttcg attatagttc tcagccgctc actggctata ccgccgacat
     3541 ctgccattta atttcccctg atggttaagg tgcttaattt ctgtggtgaa taacttctga
     3601 tgagtatgta gcgggccaga acacagcctg caagatcgca tttgccggct acttttggct
     3661 cggttggcct gctcctgcag ccggccctgg ctactatcat cgcttggttt ttgtttgctg
     3721 aaagtcctag cctgttgcag ctgttgggcg tcttgatcgt gattgtcggt atttatttta
     3781 cccgccgcgg gacacggtaa aaaaagagcc gtgggacgcg gtagatagtt tgtgattggc
     3841 tcaaggcttg acttgataga gtgggcgagg aaatctgcgt gtagatttaa atacaaaatc
     3901 cggagaccta aactaatatg cttggcgatc aaatagaagg tattggctat ttcgttgatc
     3961 tgcagccaga aactgaggat tttttagcaa cggtgttgga cggcctatcg cagcagcaga
     4021 aatcaatccc accgaaattt ttttatgatg acaaaggatc taaaatcttt gatcagattt
     4081 gtgaggcccc agaatattac atcgcccgca ccgaaatagc gctgatgaat aatattgccg
     4141 ctgagatcaa cacgctggtc gaaccgggct cgatcgtggt cgaatatggt tgtggatcga
     4201 gtatgaaaat cagggcgttg ctttcagctt tgcctgatcc agccgagtat ctggcgattg
     4261 atatatccaa gtctcatctt atttcaacgg taaaggaaat tgccgccgat tatccgaaaa
     4321 tacgtgttgg tgcgatctgc gccgattttt cggatgcttt aagctggccc aagggagcca
     4381 acgccgaccg tgatcaacgg ctggcttttt ttcccggttc taccatcggc aatcaaaccc
     4441 ctgaggaagc ccggcagttt ttagaacgtg tccgccatct ggttggcgct agaggtaatc
     4501 tattgattgg tgtcgatctg aaaaaagata ccgatgtttt gaacaaaacc tataacgatg
     4561 ttgccggata cacggctgat tttaatttaa atttgctgca tcgcattaag gcagagctgg
     4621 gcggtaagtt ggatatttca acttttgagc ataatgcttt ttacaatgaa gatctggggc
     4681 gcattgaaat gcatttaatc agccagctcg atcagtcgat tgagatcggc ggccagcaat
     4741 ttaactttcg caaaggcgag agcattcata cggaaaattc gtataaatat tcaatcgatg
     4801 agtttttaga gcttgccggt tgtgcaggct ttggatcggt aaagacttgg actgatgcag
     4861 ataattattt ttcaatccat tatctggcgg caaaataaag gcattgtcac gttaattaac
     4921 catttcaatt ttgttcactt caggtagtgg ccactagcat gtaccgccta caatatctta
     4981 tccccatttt tgtcgtgcaa ggttaatgtg acaatgccac gctagctctg attccactcc
     5041 acccgttctg catccggcat ttcaggcgcg taataccacc ttagccccaa cttttcctcg
     5101 ctgaggatat ttgtctggaa gcttcgccag gcttgaatct cgaagtagtc gagtgaaccg
     5161 ttatgagcgc gaagacgatg cgggaccccc ggcgggaaat acaccagcgt gccgggttca
     5221 agttcctgtg acgtatctcc
//
LOCUS       DASCNL010000445         1506 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000916396, whole genome shotgun sequence.
ACCESSION   DASCNL010000445 DASCNL010000000
VERSION     DASCNL010000445.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000916396"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..181
                     /locus_tag="QF359_06025"
     CDS             <1..181
                     /locus_tag="QF359_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-aminobenzoate-CoA ligase"
                     /protein_id="HJO86501.1"
                     /translation="HIILNNHDDAGPETEEELLTHCKAGIAHYKYPHWFNFVEDLPKT
                     ATGKIQRFRLREQAN"
     gene            206..694
                     /locus_tag="QF359_06030"
     CDS             206..694
                     /locus_tag="QF359_06030"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJO86502.1"
                     /translation="MALEAPISRHQEPVQEAWVDYNGHLNVAYYTLIFDNAVDVFYPL
                     CGLGEPYKEATGLSTFAVECHIGYQREGSLGDSVKVTSQLLGYDEKRLHYFHTMYHAT
                     ESYQMATQEQLAVHVDLSIRKVVPFTEGPMEKLALMWETHKDMPIPEQVGRTMTIPSL
                     KT"
     gene            701..>1506
                     /locus_tag="QF359_06035"
     CDS             701..>1506
                     /locus_tag="QF359_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86503.1"
                     /translation="MALDRETFNILLETVERFVAERLVPLEAQVAAEDQVPADVIAEM
                     KELGLFGLTIPEEYGGLGLTMTEEIEVAIKLGGTTPAFRSVFGTNIGIGSQGIVMDGT
                     VEQKAHYLPKLATGEMISSFALTEPEAGSDAGSLKTSARLDGDHYVLNGTKRFITNSP
                     SADIFTLMARTDLDTPGAKGISAFIVERKSPGLSVDSPDKKMGQQGAKTADVILEDCR
                     VPVANIIGGVAGVGFKTAMKVLDRGRLHISAVSVGIAERLINECVTYASER"
BASE COUNT          388 a          390 c          396 g          332 t
ORIGIN      
        1 ccatattatt ttgaacaacc acgatgatgc cgggccggaa accgaggaag aattgctgac
       61 ccactgcaaa gccggtattg cccactataa atacccccac tggttcaact tcgtcgagga
      121 tctgcccaaa accgcaactg ggaaaattca acgcttcagg ttgcgggaac aagctaacta
      181 aaactatcaa attggagatt acacaatggc gctagaagca cccatatcac gccatcagga
      241 gccggtccaa gaagcttggg tcgattacaa cgggcatttg aacgttgcct actataccct
      301 catttttgat aacgccgttg atgtctttta tccgctctgt ggcctgggcg agccctataa
      361 agaggcgacc ggcctctcga ctttcgccgt tgaatgccat atcggttatc agcgtgaggg
      421 cagtctcggt gatagtgtta aagtcaccag ccagctgcta ggctacgatg aaaaacggct
      481 gcattatttt cacaccatgt atcacgctac cgagagctat cagatggcaa cccaggaaca
      541 actggcggtc catgtcgatt tgtcgatccg caaagttgta cccttcaccg aaggcccgat
      601 ggagaaacta gccttgatgt gggaaaccca taaagacatg ccaatccctg agcaggtcgg
      661 ccggaccatg accataccgt cactgaagac gtaaaccgcc atggcgctcg atagagaaac
      721 tttcaatatt ctgttagaaa cggttgagcg ttttgttgcc gaacgcctgg tgccgctcga
      781 agctcaagta gcggcagaag atcaggttcc agccgatgtt atcgccgaaa tgaaagagct
      841 tggtctgttc ggcctgacga tcccggaaga atacggtggc ctcggcctga cgatgacaga
      901 ggaaatcgaa gtagcaataa aactaggcgg caccacacca gcctttcgct cggtctttgg
      961 caccaatatt ggtatcggca gccagggcat cgtcatggat ggcacggtag agcaaaaagc
     1021 gcattacctg ccaaagctag caaccggaga gatgatttct tccttcgcgc tgaccgaacc
     1081 ggaagcgggc tccgatgcgg gttccttgaa aaccagcgcc agattagatg gtgatcatta
     1141 tgtgctcaac ggcaccaaac ggtttatcac caattctccc tcggcggata tttttaccct
     1201 gatggcgcgg accgatctgg atacgccggg cgccaagggt atttcggctt ttattgttga
     1261 acgcaagagc ccgggcctca gcgtcgactc accggacaaa aagatgggcc agcaaggggc
     1321 taaaaccgcc gatgttattc ttgaagactg ccgggttccg gtggcaaaca ttatcggagg
     1381 cgttgccggt gtcggtttta agacagcaat gaaggtgctc gaccggggac ggctccatat
     1441 atctgcggtc agtgtcggta tcgctgaacg gctgatcaat gaatgtgtca catatgcttc
     1501 agagcg
//
LOCUS       DASCNL010000446         1713 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000919066, whole genome shotgun sequence.
ACCESSION   DASCNL010000446 DASCNL010000000
VERSION     DASCNL010000446.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000919066"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="QF359_06040"
     CDS             <1..663
                     /locus_tag="QF359_06040"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86504.1"
                     /translation="ENLIASTISEFGRIDAVINNAGILRDTVFHKMDEAAWSTVINVN
                     LTGCYNVARAAATHFREQESGVFVHMTSVSGLIGNFGQANYAAAKMGVTGLSRSIAID
                     LARYNVRSNCMSPSGFTRMIGSIPITSDEQAKEFERLKEEMRPEMNAPLVVFLASDAA
                     KDITGQIFATSGNHYYLLNQPRPVVSEFRYNWTPEMVADEFLSEIRDKLTPLETLNDV
                     LD"
     gene            804..>1713
                     /locus_tag="QF359_06045"
     CDS             804..>1713
                     /locus_tag="QF359_06045"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86505.1"
                     /translation="MFGTGKIVSSDQTVDKRDLAKRTLQAASALDSLGIGEGDSIAAF
                     MRNDFPLFEAQSAAALLGAYFVTINWHFRSVEAEYILTDSETKALVVHTDLLGEIRDL
                     IPPGVAVFVVPTPADIAAAYGLDAAACVVPEDEQNWGGWIEGFAEWSATPCTQRGVVF
                     YTSGTTGLPKGVFTHPTTADQQAAGAKVGDAAFRPRSGMRVLLNGPCYHVAVNHSARI
                     ALANDADLCLQHRFGAEEFLQLVETHKITHAHMVPTMFVRLLKLPTEIRQRYDVSSME
                     WITHGAAPCSPDIKKAMIEWLGPILVE"
BASE COUNT          397 a          422 c          446 g          448 t
ORIGIN      
        1 gaaaatctga ttgcctcgac gatcagcgaa tttggccgca ttgatgcggt catcaacaat
       61 gctggaattt tacgtgatac tgtttttcac aaaatggatg aagccgcctg gagcaccgtc
      121 attaatgtca atttaaccgg ctgttacaat gttgcccgag cggctgcgac tcatttccgc
      181 gaacaagaat ccggcgtctt tgtccacatg acttcggtct cgggcttgat cggtaatttc
      241 gggcaggcta attatgcggc ggcaaaaatg ggcgtgactg gattgtcccg ctcaattgcg
      301 attgatctgg cgcgctacaa cgtccgctcg aactgcatgt cgccttccgg tttcacccgg
      361 atgatcggtt cgatcccgat taccagcgat gaacaagcca aggaatttga gcgtcttaaa
      421 gaggaaatgc ggcctgaaat gaacgcgccg ttggtggtct ttctggccag cgatgcggcc
      481 aaggatatca ccggccaaat ctttgctacc agtggtaacc actactattt actcaatcag
      541 ccccgaccgg tggtgtcaga attcagatat aattggacgc ccgagatggt tgctgatgaa
      601 tttctcagcg agatcagaga taaactaacg ccgctggaaa ctctcaacga tgtgctggat
      661 taaaccgtcg cggtactacc gagcaacgct gtcacttggc cttgcccaac gcaatctccg
      721 caccattgtt tagttccaaa tcatataata agtattggat agtgtaaaaa cacagttagc
      781 cgccagggga actcaaggaa aaaatgtttg gtaccggtaa aatcgttagc tcagatcaaa
      841 ccgttgataa acgggattta gcgaagcgca ctcttcaggc agcttcagca ctggactctc
      901 tcggtattgg cgagggagat tctattgccg cctttatgcg caatgatttt ccgttattcg
      961 aagcgcaaag tgcggccgca ttgctgggcg cttattttgt caccatcaat tggcatttta
     1021 gaagtgttga ggcggagtat attcttaccg attccgagac caaggcactg gttgttcata
     1081 ccgatttgct gggtgaaatt cgtgatttga tcccgcccgg cgtggccgtg tttgttgtac
     1141 cgacaccagc tgatattgct gcggcttatg gccttgatgc cgccgcttgc gtggtgccgg
     1201 aggatgaaca gaattgggga ggttggatcg agggttttgc cgagtggtct gccacgccat
     1261 gcactcaacg cggcgtagtt ttttatacgt cgggcacgac cggtttaccc aaaggtgttt
     1321 tcactcaccc gacgacggca gatcagcagg ctgctggagc taaagtcggt gacgccgcct
     1381 ttcgcccgcg ttcaggtatg cgcgttttgc tcaatggacc gtgctatcac gttgctgtca
     1441 accattcggc acgcattgct ctggctaatg atgctgattt atgtcttcaa catcgttttg
     1501 gtgccgaaga atttttacaa ttggtggaaa ctcacaagat tacccatgcc catatggtac
     1561 cgaccatgtt tgtccggctc ttgaaactgc ccaccgaaat acgccagcgc tatgatgtct
     1621 cgtcgatgga gtggatcacc catggagccg ccccctgttc gccggacatt aagaaagcaa
     1681 tgatcgagtg gttaggacct atcttggtcg aat
//
LOCUS       DASCNL010000447         1275 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000920559, whole genome shotgun sequence.
ACCESSION   DASCNL010000447 DASCNL010000000
VERSION     DASCNL010000447.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000920559"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..997)
                     /gene="murJ"
                     /locus_tag="QF359_06050"
     CDS             complement(<1..997)
                     /gene="murJ"
                     /locus_tag="QF359_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HJO86506.1"
                     /translation="MALLRSIATVGSFTMLSRILGFIRDILIAAILGTGLIADAFFVA
                     FKFPNLFRRLFAEGAFNAAFVPQFTGLLESDGKLMAQFFAEQALAVLLWSVLIFVVLI
                     QIAMPYVMLGFAPGFIGNPAQFDLAVLLTRITFPYLLFISLASLMAGVLNSLSRFAAA
                     AATPILLNICLIGAVTLLARHTPTPGHALAWGVSIAGMVQFFWLLIHCERAGIRLRLI
                     RPRLTPDVRKMTRRIVPVAIGAGVYQVSLLIDTIIASLLPAGSISYLFFADRVNQLPL
                     GVVGVAVGTALLPLMSRQLRSGDEAAATASQNRAIEFSLFLTLPAAVALVVIAEPI"
BASE COUNT          366 a          347 c          324 g          238 t
ORIGIN      
        1 tgatgggttc agctatcacc accagcgcca ccgccgccgg cagggtcagg aacagcgaaa
       61 actcgatggc gcggttttgg cttgctgtcg ccgcggcttc gtcaccgctc ctcaactggc
      121 gtgacattaa aggtaatagc gccgtgccca cggcgacacc gacgacgcct aagggcaact
      181 gattaacccg gtcggcaaag aacaaatagg agattgagcc ggccggtaaa agagacgcaa
      241 taatagtgtc gatcagtagg ctgacctgat aaactccagc gccgatggca accggcacaa
      301 tgcggcgggt catcttcctg acatccggcg tcaggcgcgg ccggatcaag cgcagccgga
      361 tacctgcccg ctcgcaatgt atcaacagcc aaaaaaactg caccataccg gcaatcgata
      421 caccccaggc caaggcatgg cccggcgtcg gcgtatggcg cgccaatagt gtcacggcac
      481 cgatcaagca aatattaagt aaaatcggtg tcgccgctgc ggcagcaaag cggctcaagg
      541 aattcaacac ccccgccatc aaagacgcca gggaaataaa cagcagatag ggaaaagtaa
      601 tacgggtaag caagaccgcc agatcaaact gcgctgggtt accaataaag cccggagcaa
      661 agcccagcat gacataaggc atggcaattt ggatcagcac gacaaagatc agaaccgacc
      721 acagcagcac cgccaaagcc tgctcggcaa aaaattgggc cattaatttg ccatcgcttt
      781 ccagcaaccc ggtgaattgc ggcacgaaag ccgcattaaa cgccccctcg gcaaacaggc
      841 ggcggaacag attggggaat ttaaaggcaa caaaaaaggc atcagcgatc agcccggtac
      901 ccaggatcgc cgcgataagg atatcgcgga tgaaccctaa gatacggctc agcatggtaa
      961 agctgccgac cgtcgcgatt gagcggagaa gtgccatgca aaaggtctag accatactgg
     1021 ttaaagaaag actgctaaaa gacttaaatt aaacgaagac tggtgccaaa atatacccaa
     1081 tttttctatg attgtagggg tttctccctg gaaaactcaa ttgtcgactt ttttatcaac
     1141 gcttctgttt cccgaattcc ggaaccggtc ttcaagtatt attatcgcca taaattgggc
     1201 aggattaagg cggatttact ttaccgcctc atattttttc tcgcccactg gctcgacggc
     1261 ttttaagagc tcttg
//
LOCUS       DASCNL010000448         2635 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000928224, whole genome shotgun sequence.
ACCESSION   DASCNL010000448 DASCNL010000000
VERSION     DASCNL010000448.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2635)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000928224"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            782..2461
                     /locus_tag="QF359_06055"
                     /pseudo
     CDS             782..2461
                     /locus_tag="QF359_06055"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
BASE COUNT          684 a          636 c          607 g          708 t
ORIGIN      
        1 cttaggcaag cttattttac gtattcctta ataattaatt tttccaaaat atcatcgagg
       61 ataaaatatt atttgaaaat gccaacttgg tttaaaaaat ggcagacaaa ggcggtggaa
      121 tctttcatca agaactctcc aagggcattt tccaacggca atatttcctc ttaggacgat
      181 taataattga gtattttttt tgagcttgag cttgctatcg atcaatcaaa atcaatacat
      241 caagattttt aaagtgcaga aatactgttt cccaatctac cttaaatact ttggtttttt
      301 ctcgacggga ggatcgctgg aaattatacc gcccaatttc cgaatcaaaa atggacaaat
      361 taatcacgca aggaatccgg attattaccg agagcgattg ggatcaatat tggacttgga
      421 aattgttgaa tctaaaccaa atcctcaccc taaacagata gtgcgtacct taaattcact
      481 ctaaatatct gtaattttcg ctcgactgat cactcatcgg tctttacgct gtttagcacg
      541 agttcaaggc ggagattatt ttcgccatgg tcagataaat ttcagcggcc caaccaaact
      601 ggcaatcggc attttcgtgc tcatcacgct cggtctgctg gtactgaaag gccgtaccgc
      661 tgaaaccttg aaacttcgag aatgatgcct cagtgagatg accgcgccag ccctttccac
      721 accgatagat ccaattttaa cttcggtctt gcagcgccgg tttaaatcga tcaccgagga
      781 aatgggcctc acgctcctcc gcaccactca ctcaccgatc ctcaacgagg ccagggattt
      841 tgttaccggt ctctatgatg cgcaaggccg catgctggaa cagaccgaat atattcctgt
      901 gctagccttt gctctacagc cggtctgcca acgcctgatt gatactttcg gcgacgatat
      961 ccatgacggt gatgtatttc tccacaacga tgtttttacc aacggcaacc aaaacaacga
     1021 tgtcgctgtg ttccggccga ttttctttga agacaagcta attgcttggg cggcgtgcaa
     1081 agggcatcaa gccgatatcg gcggcgcggt cagaggtggt tacaaccccg atgcccgcga
     1141 ggtctggcag gaagctttcc gcataccgcc ggtgaaaata attgaccggg gcaaacggcg
     1201 cgacgatgtc tggcatttgg tttttgccaa tgtccgcctg tccgtggttg aagatgatat
     1261 caaggcgcaa gtaggcgcaa ccgttatggg tgaacgcggt atccttcacc tgctggagcg
     1321 ttatggtaca gcgacactgc gcaatcatat cgaacaactg tttgatgcga ccgagcaaat
     1381 ggtgcgcaat gaaattagcg tcatccccaa cggtacgtat cggggcgaaa gcttcgcctt
     1441 ctacgacggt gtcgaagatg acaccaagat gaagattaat ctggcggtaa cggttgatga
     1501 tgaaagtgta actttcgatt ttgccggctc ggcgctgcag acccctggtt tcgttaatgc
     1561 tccattggcc gcgacatcat ccgccgtact gctcagtttt ctaatgctga ttaatccgga
     1621 tattccacac aatgacggcc tgaccaggac catacattca aaagtgccgg aaggtacttt
     1681 tttaaacgcc agctaaccgg cggcaacaac attcggtaat tctctgaccg gtccgatctc
     1741 cgatgcaatc ttccgcgctt tctccgaagc tctgccgttt accgttaccg ccggctggaa
     1801 ccgcatgctg tctcttgtac tcacgggcga tgatccgggc aaatcaggcg ctcccttcgt
     1861 cgacatactt tttatctctc agaaaggcgg ctcaggcgca gctcatggtg tcgacggcta
     1921 tgatcatatt ggactcatta actgcgccgg cggattgctt gcgcaggatt atgaaatgtt
     1981 cgagaaccaa aatccagttc atctccgcaa acatgaatta atgcaggatt cagccggccc
     2041 cggccagtgg cgcggtggct acggtaccga aacagaaatc gttatcgaag gtgacaatgt
     2101 cactggcgtc gtgtttggtg atggtatcga ggaagaggcc aaagctttcg gcctgtttgg
     2161 cggtggttcc ggaattaaaa ataaaatgaa ttttgccacc ccagacaatt cggagcacac
     2221 ccctaaatct aaagaaatcg tcaaaaatat tgcgacctac actgtcttaa ctcaaatcgc
     2281 cggtggtggt ggtggctatg gcgatccgtt tgaacgaccg accaaaattg ttcaacgaga
     2341 ggctgttaac gggctggtat ctatcgaagg ggcccggcag tattatggtg tcgttattga
     2401 tccggagagt ttagaattag atcaagaatc cactgatgct ttaaggggtg taattcggtg
     2461 acagtttact ttttgctggc taacgttttg ttttagccga catttcccaa gtaatctcca
     2521 aactcggtac gagtatacaa aatcacacca tttcttaaag gtttatcttc tccagccaca
     2581 cttcacatcc agctttggca atttaacgct gttctgaatg ctatttttcg ataat
//
LOCUS       DASCNL010000449         2182 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000928355, whole genome shotgun sequence.
ACCESSION   DASCNL010000449 DASCNL010000000
VERSION     DASCNL010000449.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000928355"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="QF359_06060"
     CDS             complement(<1..197)
                     /locus_tag="QF359_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86507.1"
                     /translation="MQLKSWDRPGKSCGRFFNGVIHLTDWGFDLQLVPPDISFKALKR
                     GGHHGYQENPQQKDYELGRNW"
     gene            611..1882
                     /locus_tag="QF359_06065"
     CDS             611..1882
                     /locus_tag="QF359_06065"
                     /inference="COORDINATES: protein motif:HMM:NF024240.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO86508.1"
                     /translation="MGSGAAGLSAALEAALLGESVVLVDAAPQIGGQAVGSALSTICG
                     LFSNATAPTRLTHGVMDDMFETFLANGDATLHRVRGTYIFDYMVNSWMRWAEDKIVSL
                     GINPIPGAIVRAVEKKAGNIEGLFITTRFGDATVEANRFIDASGDAVLPWLAGLDLQE
                     SDRNVLGSVMAVLENVDTEVCRQYPRSLYHDIIRKHGNEFGLVRFEGPVFVLPKEGSV
                     LLNLTHIETPMEASGLALACIDGHRQVDSLLKLFKRELPEAYKESRVALYGGAGIRQS
                     RTIISQTHVTLDDIINGTQPSDAIARTTWPIEFHGDMAEASWTVFDESHMHYIPFGAM
                     VPVGLDNVVVAGRCIDAAPAALASLRVMGPCFAMGRAAAAAAHLTRNGSLHQIDILSL
                     QESIGDNLHKNSVDSWSNNFVKETGPEANGI"
BASE COUNT          568 a          535 c          526 g          553 t
ORIGIN      
        1 caccaatttc ggccaagctc gtagtctttt tgttgcgggt tttcttggta gccatgatgg
       61 cctcctctct ttagtgcttt gaacgaaatg tccgggggca caagctgaag atcaaatccc
      121 caatccgtca ggtggatcac tccattaaaa aaccgcccgc agcttttgcc gggacggtcc
      181 caactcttta gctgcattta ttgaacgccc gcaagctgtc tctcaaatcg gcgttgaaga
      241 taatttagct caatttgcgt tcaaaatcaa ctaacaaaac ttgatggggt ccacaggtga
      301 ctcttagaac taatggtgtt agcgttttga tatgactgtt gaagaaatac aaaacctgat
      361 aaaaaaagct atattttcag ggcgacaaat agttatgaac tatactaacg cccagagtaa
      421 aatagattca tacaaaattc tttcgataac cagcacttgg gcagaatatt ttaaaactaa
      481 agctgtacgt ttatcagatt gtcaaagtag atttcgaaag gctagtcgat aaatgtctca
      541 attcccaaaa ctgcgtacaa tacgtctaaa gaaccaatct gcgccaatat acaaagccga
      601 catttgtgtc gtgggatcgg gtgccgcggg attatcggct gcattggaag ccgcattgct
      661 cggagaatca gtggtcttgg tcgatgccgc accacaaatc ggtggccaag ctgttggatc
      721 cgcgctcagc accatatgcg gccttttcag caacgccacg gcccctacgc ggcttacgca
      781 cggcgtgatg gacgatatgt ttgagacctt tctagccaat ggtgacgcaa ccctacaccg
      841 ggtgcgcgga acctatatct ttgactacat ggtcaatagc tggatgcgct gggccgaaga
      901 caaaatcgta tctctcggca tcaaccctat ccccggcgcg attgtccgcg ccgttgaaaa
      961 aaaggcaggt aatattgaag gactattcat caccactcga ttcggtgacg caacagtaga
     1021 agccaaccgt tttatcgacg cctccggcga tgctgttcta ccgtggctcg ctggactgga
     1081 tcttcaagaa tctgatcgga acgtcttagg gtcggtgatg gccgtgctag aaaatgtaga
     1141 caccgaagtt tgccgccaat atccccgttc gctttatcac gatatcattc gtaaacacgg
     1201 caatgaattt ggccttgttc gatttgaggg acctgtattt gtattgccaa aggaaggaag
     1261 cgtcttactc aatctcaccc atattgagac gccaatggaa gcttcgggtt tggccctcgc
     1321 ttgcatcgat ggccaccggc aagttgattc cttgctcaaa ctattcaaac gcgaattacc
     1381 ggaagcatac aaagaatcgc gggttgcgct ttatggcggc gcgggtattc gacaatcacg
     1441 cactattatc agccagaccc acgtcacgct ggacgacata atcaacggca cccaaccttc
     1501 cgacgccatt gcccggacga cttggccaat agaatttcac ggcgacatgg ccgaggcaag
     1561 ctggacggta ttcgatgaaa gccacatgca ttacatacct tttggcgcga tggttccggt
     1621 gggtttggat aacgtcgttg tggccggacg gtgtatcgac gccgcgcctg ccgcgcttgc
     1681 cagcctacgc gtcatgggtc cgtgctttgc catgggacgt gcagcagcgg cagcggcaca
     1741 tttaacgcga aacggctcac tccatcaaat tgatatcctg tctctgcaag aatccattgg
     1801 cgacaatctg cataaaaatt cggtcgattc ctggtccaat aattttgtca aagagacagg
     1861 ccctgaggcg aatggcatct aatacggggg ctttatagtt tgaaatggtt ggttgcgggg
     1921 gcttgcaaca agcaagctcc tacattaatt agacccattt gattgtaggg ccataactgt
     1981 tgtgtgggca agcaacaagc aggctcctac attgattagg cacatttgat tgtagggcca
     2041 taacggcact gtcagaagaa aatcgacttt gacgatgtcg tagcactctc ataatgtttt
     2101 gagatgaaaa atcataatcc tttccgatat tttaaaacgt cgcccgagat tatccgcctc
     2161 gccgtgatga tgtatgtcag gt
//
LOCUS       DASCNL010000450         2566 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000929508, whole genome shotgun sequence.
ACCESSION   DASCNL010000450 DASCNL010000000
VERSION     DASCNL010000450.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000929508"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            446..2497
                     /locus_tag="QF359_06070"
     CDS             446..2497
                     /locus_tag="QF359_06070"
                     /inference="COORDINATES: protein motif:HMM:NF014071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJO86509.1"
                     /translation="MGEKQWVVGTDIGGTFTDVICINMETGEQRLGKVASTPPTFFDG
                     VINGLKRAGISGDEVLSFRHGATVSTNAILERKGVQTALITTEGFRDVLGGGRAERIS
                     AFELDWDPPEIIIPRRNVMPVRERVGPYGDVLTEINEEDVLLAARKCKKRGIKSIAVV
                     YMDSFMNPVHELRTREILAKELPDVDVTLSHEVLPQMLEFERTCTTVLNAYISPILKN
                     YLGGLAKRLKEDWGYDGPLLITTSGGGVIGMDEAVKFPAKTFHSSPVSGAVGMAGYIG
                     SLANFDNVIAFETGGTTNNVSMIYEGSPAITHEWKILWNVPCCLPSVDTVYIGSGGGS
                     ISWVDNGGILNVGPQSMGAVPGPACYGQGGDEATNTDSQIVLGRIDPEYFLGGEMKVD
                     GDLSFKAVQEKVGDHYGWSVQEAAANTYMVALSALMMAMRIQTVSRGWDPREFAIVPY
                     GGGGALYACDLAREIGSTTVVVPPLPGYASAFGAIRVDVKHEFTTPIHQTEEELDFDE
                     LNKEVQNLVEKSHAILAKEGIEEDMASVERFVDVKYFSQSRFFTVDFPDGELKSLDGI
                     IKNFMDDMEAEYGYSLPEGYAPVEVVNLRVVAKGEIIKPDLPEIEKGGKLATKATRQV
                     WFKDHDFLEADIYERGELPPGAEFSGPAVIEQPDTTTVMPPGTHCKVDKYGNLIIKVD
                     Q"
BASE COUNT          661 a          567 c          692 g          646 t
ORIGIN      
        1 catcgacatg acggttgtcg tcagcccaat ggtttggggt aaattaggca ccaacatcat
       61 gaacgattat ctttccggta agaagcataa gcagaaaatt tttatcaaac atatcattgc
      121 gaccaaaggc acagccgcaa aatatctgcc gccaaaacgg aaaaaatagc cgcccgtttg
      181 gttgttgaga ctaatcggcc agcggaataa ttggagtttt ttagtaattc cgctggccgc
      241 tatcgaattt tttattcggc agttaaataa acgcaaaaaa atctattttt ttgccgagaa
      301 gtaattgaca tacccatcta aaagagaata acgttcatta ttaaaaaaga acgatattct
      361 tatatgtggt tcaacggttg aggctggtct acatcggttt caggcaccat caaccaagaa
      421 ataaataagt agggagaaat taatcatggg tgaaaagcaa tgggtagtcg gtaccgatat
      481 cggtggtacc ttcaccgatg ttatttgcat caatatggaa accggagagc aacgactcgg
      541 caaagtggcg tcgacgccgc cgacattttt tgatggcgtg atcaacggtt tgaagcgggc
      601 cgggatttcc ggtgatgaag tgttgtcttt ccgccatggt gcgacggttt caactaacgc
      661 tatcttggag cgcaaaggcg ttcagacagc tttgattacc accgaaggtt tccgcgatgt
      721 cttgggcggt ggcagagctg aacgaatttc tgcctttgaa ttggattggg atccgcccga
      781 aattattatt ccccgacgca acgtcatgcc cgttcgcgag cgcgttgggc catatggtga
      841 tgtactcacc gagattaacg aagaagacgt tcttttggcg gcgcggaaat gtaaaaagcg
      901 cggcatcaaa tcgatcgccg tggtctatat ggattctttt atgaacccag tacatgaatt
      961 gcgcacccgc gaaattctgg ccaaagagct acctgacgtt gatgtcacct tgagccacga
     1021 agtgctgccg cagatgctag agtttgagcg cacctgcaca acagtgctga acgcttatat
     1081 ttcgccgatc ctgaaaaatt atctcggtgg tttggctaag cgtctcaagg aagattgggg
     1141 ctatgatggc ccgctgctga tcacgacctc cggcggcggc gttattggca tggatgaagc
     1201 agttaaattt ccggctaaaa ccttccactc ctcgcccgtc tccggtgctg tcggcatggc
     1261 cggttatatc ggttccttgg ccaattttga taacgttatt gccttcgaaa ccggcggcac
     1321 gaccaacaat gtgtcgatga tttatgaagg ttcgccagcc attacccacg aatggaaaat
     1381 cttatggaat gtgccgtgct gcctgccttc ggtggatacg gtttatattg gctccggcgg
     1441 tggcagtatc agctgggttg ataacggtgg tattctcaat gtcgggccgc aaagtatggg
     1501 tgcggtgccg gggccggctt gttacggtca gggtggtgat gaagccacca atactgatag
     1561 ccagattgtt ttgggccgga ttgatccgga atacttcctc ggcggcgaaa tgaaggttga
     1621 tggtgatctc tcgttcaaag ctgtgcagga gaaagtcggc gatcactatg gctggagtgt
     1681 ccaggaagcg gccgccaaca cttatatggt agcgctcagt gcgttgatga tggcgatgcg
     1741 gattcaaacc gtttcacgcg gctgggatcc gcgtgagttc gccatcgtgc cttatggtgg
     1801 aggcggcgct ttatacgcct gtgatctcgc ccgtgagatt ggttcaacca ccgtcgtggt
     1861 gccgccgtta ccgggctacg cctcagcctt cggcgccatt cgggttgatg tgaagcatga
     1921 gttcacaacg ccgatccatc aaactgaaga agagcttgat ttcgatgagc tcaacaagga
     1981 agtgcagaat cttgtcgaaa agtctcacgc gattttggcc aaagagggta ttgaagagga
     2041 catggcctcg gtcgagcggt ttgtcgatgt caaatacttc tcgcaaagcc gcttcttcac
     2101 ggttgatttt cctgatggcg agctcaaaag tctcgacgga attatcaaga atttcatgga
     2161 tgatatggaa gctgagtatg gctacagcct gccggaaggc tacgctcctg tggaggttgt
     2221 caatttgcgg gttgtcgcca aaggtgagat catcaaacct gacctaccgg aaatcgaaaa
     2281 aggtggtaaa ctggccacca aggcaacccg ccaggtttgg tttaaggatc atgatttcct
     2341 tgaagctgat atttatgaac gcggtgaatt gccgccaggg gctgaattca gtggaccggc
     2401 agttattgaa cagccggata ccacgacagt gatgccgcca ggtacgcatt gcaaagtaga
     2461 taaatacggc aatctcatta tcaaagtaga tcaataagga ggctaaaatg gcaaaaaaat
     2521 cagaaatcga cgtaaaggaa aaattgtcga atattgaggg tcttca
//
LOCUS       DASCNL010000451         7410 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000938222, whole genome shotgun sequence.
ACCESSION   DASCNL010000451 DASCNL010000000
VERSION     DASCNL010000451.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 7410)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7410)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7410
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000938222"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(203..445)
                     /locus_tag="QF359_06075"
     CDS             complement(203..445)
                     /locus_tag="QF359_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HJO86510.1"
                     /translation="MQTVFVQVKCELGHVYKVAEEAIESVDKISEIHSTSGQFDLLIK
                     CYLDDTDDIGHFISDEIQTLPGVKDTYTLITFKAFS"
     gene            complement(592..1950)
                     /locus_tag="QF359_06080"
     CDS             complement(592..1950)
                     /locus_tag="QF359_06080"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019085583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HJO86511.1"
                     /translation="MSFADLGLSEEVLKAVSDAGYSEPTPIQEKAIPTVLIGRDILGC
                     AQTGTGKTASFTLPMIDILAHGRGRARMPRTLILEPTRELAAQVAENFDTYGKYNKLT
                     KALIMGGTSMVEQSKLLDRGVDVLIATPGRLLDLFDRGGLLLSDVKILVIDEADRMLD
                     MGFIPDVEKIVSLLPKIRQTLFFSATMPPEIKRLADAFLMNPKEITVAPPATPVATIT
                     QGLYMVDHRAKRDVSGLQKKKRDALRQIIKQEDVKNALVFCNRKKDVDIVNRSFLKHG
                     FNSATLHGDMAQASRMETMAKFKDGEYDYLICSDVAARGLDIDDLSHVFNFDVPMHAE
                     DYVHRIGRTGRAGKQGRAFSIAGRDDKKFIDAIEKLIGKEIPRLEIEGALPEIQIKEE
                     RKSKTKRAAPKKPTTAEKAEKKSTPRRTLKKQVGEKITDNIPVEGWGDHVPAFLMRAV
                     KS"
     gene            2394..3509
                     /locus_tag="QF359_06085"
     CDS             2394..3509
                     /locus_tag="QF359_06085"
                     /inference="COORDINATES: protein motif:HMM:NF012894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HJO86512.1"
                     /translation="MKNSRNEFFSRKLLATIALSVLLVGCSSVPDALNPVEWYKSARD
                     ASSGDDEKKKKDPDKSSDKSVPGENEGFPKLSSVPPKPKATVAEERKRIAAGLVADRE
                     EARKYSSDVIRRQGDPANRLPAPPPPTVNLQPAPKQVIKAMPKVAPKPAPKLEPVTSL
                     KRQTQTASPKLRIVPLSPIVKVPDVNLNSPQLEAIPGIGNSFDQSSTVVVSDSGVQTF
                     GGRTQAHPARSRANAGEANVPGVRSLNDFEANGLQGSYQVATILFDNGSSKVKSRARR
                     ILRQVMAQHKQVGGTLRVVGHASRRTKTNDPIRHKMANFQVSTARAERVAKELVKMGV
                     KANKLFVGSVSDSEPRYYEYMPSGEAGNRRTEIYIDF"
     gene            3645..4868
                     /locus_tag="QF359_06090"
     CDS             3645..4868
                     /locus_tag="QF359_06090"
                     /EC_number="2.6.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HJO86513.1"
                     /translation="MEQEFHRIKRLPPYVFNEVNDMKARARAAGEDIIDFGMGNPDQP
                     TPRHIVEKLVETVDDPRTHRYSASRGIPGLRKAIAAYYGRRFNVEIDHNSEAIVTLGS
                     KEGLANLASAITSPGDVILVPNPSYPIHQFGFIIAGASVRNVPVAPDPDYLKALEIAV
                     IHSVPKPTAVVLNYPNNPTAITTDLDFYGQVVDFCKHHGIYILSDLAYAEVFFDDNPP
                     PSILEIPGARDVAVEFTSMSKTYSMPGWRIGFAAGNKTMIAALARIKSYLDYGAFTPI
                     QVAATAALNGPQDCVDEMRDTYRERRDVLIESFGAAGWDIPSPPATMFSWAPIPDAFA
                     YLGSVEYSKLLLREAQVAVSPGVAFGEHGDGHVRVSLVENKHRIRQAARNVKTFLGAY
                     DKVLEESEKQRAAVS"
     gene            4865..6160
                     /locus_tag="QF359_06095"
     CDS             4865..6160
                     /locus_tag="QF359_06095"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HJO86514.1"
                     /translation="MSKSPLRIGIAGLGTVGGGIIKLLNSQAALLAARCGRAIEVTAV
                     SARDRYKDRGVDLSAYTWHDDAVGLASDDNVDVVAELIGGEDGVVKALVEAAIANGKH
                     IVTANKALIARHGTALAKSAETANVTLAFEAAVAGGVPIVKAMREGLAANTFSRVFGI
                     LNGTCNYILSEMRETGKEFDVVLKEAQELGYAEVDPAFDVDGVDAAHKLAILTSLAFG
                     CEVNFDEVHVEGIRHISPLDIEFADDLGYRIKLLGIARRTDKGIEQRVHPCMVPLDAP
                     IAHIEDVFNAVVVDGDHVDTTMYEGRGAGEGPSASAVVADIMDIAAGRLPCAFTIPAD
                     QLSKMQVAPISSHVGSYYVRFMVVDKPGVFATIASALHENNVSMEAVLQRGRSENEAV
                     PVVMTTHEADEAAMIATLETIEKNDAVVEPPRLIRIESF"
     gene            6222..7193
                     /gene="glpX"
                     /locus_tag="QF359_06100"
     CDS             6222..7193
                     /gene="glpX"
                     /locus_tag="QF359_06100"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HJO86515.1"
                     /translation="MDRNLALEAVRVTEAAALAASRLMGRGDEKAADQAAVDAMRRAL
                     NSLHMQGTVQIGEGERDEAPMLYIGEEVGTGEGPKIDIALDPLEGTTITAKGGTNALA
                     VIAMAEEGGFLNAPDTYMDKIAVGHGLPEGVVDLDDSVANNLTNLAKAKDMDIGELVA
                     CILDRPRHEEIIAKTRESGARIMLIGDGDVSGVIATSTEEAGVDIYMGTGGAPEGVLA
                     AAALRCIGGQMQGRLVFRNDDERGRAERLGITDYDRKYNLMELAGGETMFAATGVTMG
                     TMLKGVRRFKNGAMTHSLIMRSKSGTVRYIEAEHNFERKTGFVPADG"
     gene            7196..>7410
                     /locus_tag="QF359_06105"
     CDS             7196..>7410
                     /locus_tag="QF359_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HJO86516.1"
                     /translation="MAGAPTDNLFFEVKHSCTGKRWLERSGDSRHALAISQQFQLPEI
                     IGRFLDTRGITADQVEAFLDPKLTSSLP"
BASE COUNT         1825 a         1708 c         1953 g         1924 t
ORIGIN      
        1 ctggcaaatt gtttaaactg cccgagcgcc gcattattga aacacacaac gaggaaagta
       61 tcttggctgg catggcggaa aaaagcgcga atgaattttc gggtggcgac gtctatgcct
      121 agggacgttt gttgtcctca ctatgtccat cgaaatttat tgccgttgtc atcggggcaa
      181 ggtgcttgag caataaccaa tattaagaaa atgctttgaa ggttatcagc gtataagtgt
      241 cttttacgcc gggcaaagtc tggatttcat cgctgatgaa atgaccgata tcatcagtat
      301 cgtccaaata gcatttaatc agtaaatcaa actgaccgga agttgaatga atttccgata
      361 ttttatcgac ggactcaatg gcttcttccg ccactttata aacgtggccg agttcacatt
      421 ttacttggac gaaaacggtt tgcatttctt cctcccagga atttgcgcgt aattggtatg
      481 aataagcatt tgttattata catgatttta ccgcaaactg aataaccggc tttttcggtc
      541 gagaaaatct gaaaattcag gaattaaata aaggccgctt ggattataaa actaggattt
      601 cacggcgcgc atcaggaaag ccgggacatg atcaccccag ccttcaaccg gaatgttatc
      661 tgtaattttt tctccgactt gttttttgag agttcgtcga ggtgttgatt ttttctcagc
      721 tttttccgca gttgtaggtt ttttcggtgc agcgcgttta gttttactct tgcgctcctc
      781 tttaatctga atttccggta gagcaccttc aatttccagg cgcggtattt ctttgccgat
      841 tagcttttca atcgcatcaa taaacttttt atcatcacgc ccggcgatag agaaggcacg
      901 gccttgcttg ccggcgcgtc cggtacggcc aatacgatgg acatagtctt cagcatgcat
      961 tggaacatca aaattaaaga cgtgacttag atcatcaata tccaggccgc gcgcggcgac
     1021 gtcactgcag atgagatagt catactcgcc gtctttaaac ttcgccatgg tttccatacg
     1081 tgaggcttgc gccatatcgc catgcaacgt agctgaatta aagccgtgct tgagaaaaga
     1141 tctattgaca atatctacgt cttttttgcg attgcaaaat accaaggcgt ttttgacatc
     1201 ttcctgcttg ataatttgac gcagcgcatc gcgttttttc ttttgcagcc cactaacgtc
     1261 acgtttagcc cggtgatcaa ccatatagag gccttgggtg atcgttgcga cgggagttgc
     1321 aggtggagct actgtaattt cttttgggtt catcaggaat gcatcagcca agcgtttgat
     1381 ctcgggtggc atggtcgcgg agaaaaacag tgtttggcgg attttcggca acaaggagac
     1441 aattttttcg acatctggga taaagcccat atcgagcatc cggtctgctt catcaatcac
     1501 caggatttta acgtcgctca gcaataagcc accacgatca aacagatcca gcaaccggcc
     1561 aggcgtggct ataaggacat caacacctcg atcaagcaat ttactttgct cgaccattga
     1621 ggtgccgccc atgatcaaag ccttggtgag cttgttatat ttgccataag tatcaaaatt
     1681 ctcggcaact tgtgccgcca attcgcgggt cggctccaaa atgagcgtgc gcggcatcct
     1741 tgctcggccc cggccatgag ccaggatatc gatcatcggt aaagtgaaag atgcagtttt
     1801 ccccgtgccg gtctgggcgc aacctagaat atcgcggcct attaaaacgg tagggatggc
     1861 tttttcttgg atcggggttg gttcactata accggcatcg gatacggctt taagaacctc
     1921 ctcgctgaga ccaaggtcag caaagctcat atgttggtgt ccgggttgaa tatgtagttg
     1981 aacaggagac tatcgctcat aatatattga agtggggggc gaaataagcg aaattatggc
     2041 aattgtcaat gctggggagt gactaattct gcttgaatac taatatactg atatgctgtc
     2101 tgatgtgaac agcatatcct gcctcgaaaa atatcaaatt ttgctaatat aatgcgtaat
     2161 cataaatgga atatatttac ttcattggga taaattctca gatgttgcgg aaaactgttt
     2221 aaaattgggc taatttcaca ttatagtcgg tatagtcggt ggattattta ataattactt
     2281 ttacttgggg aatgttcgta acctgttaac gaaattgcgt cattgtcgct gctgatttgt
     2341 ataatttaag agactattct ctacgactct acgagattga ggaaataatg tatttgaaaa
     2401 attcaagaaa tgaatttttt tcgcgtaaac tactggccac cattgctttg agtgtcttgc
     2461 tggttggttg ttcatcggtc ccggacgctt taaatccggt tgagtggtat aaatctgccc
     2521 gtgatgccag ctcaggcgat gatgagaaaa agaaaaagga tccggataag tcttcagata
     2581 aatctgtacc aggggaaaac gaaggtttcc ctaaactttc atcagtgccg ccaaagccta
     2641 aagccacggt cgcggaagaa cgcaaacgta ttgccgcggg tctcgtcgct gatcgagaag
     2701 aagcgcgtaa atattccagc gatgttatcc gccgccaagg tgatccagcc aatcggctac
     2761 ccgcaccacc gccgccaacg gtgaatttac agccagcacc gaaacaggtc attaaggcga
     2821 tgccaaaggt tgcgccaaaa ccagcaccga agctggaacc cgttacgtcg cttaagcggc
     2881 aaactcaaac tgcctcgcct aaattgagaa ttgtgccgct atcaccgata gtgaaggtac
     2941 cggatgttaa tcttaattcg ccgcaactgg aggcaattcc aggaatcggc aacagctttg
     3001 atcaatcttc tacagttgtt gtttcagaca gtggggtgca aacatttggt ggacggacac
     3061 aagcccaccc agcaagatcc cgcgccaatg ccggcgaagc aaatgtgccg ggtgtgcgtt
     3121 cattaaatga ttttgaagct aatggattac aagggtcgta tcaggtcgcg accattttgt
     3181 ttgacaatgg gtcgtcaaaa gtgaaatccc gggctcgccg cattttacgt caagtcatgg
     3241 cacagcacaa acaggttggc ggtaccctgc gcgttgttgg acatgccagc cgtcggacca
     3301 aaaccaatga tccgatccgc cataaaatgg ccaattttca ggtttcaact gctcgcgctg
     3361 aacgagtcgc taaggaatta gtaaaaatgg gtgttaaagc aaataaattg tttgttggct
     3421 ccgtttctga tagtgaaccg cgctattacg aatatatgcc ttcaggtgaa gcaggaaatc
     3481 gccggacaga aatttatatc gatttctaac tggttcttct ggcgtttcgg cgctaaacca
     3541 tcgtttagga ctatttagga aggcttgcgc ttaattcaga gggcgagcca gctgttaata
     3601 tatatcgaaa ggatacccgg ttataagatc gggcagctaa ggcaatggaa caggaattcc
     3661 atcgaattaa aaggttgccg ccatacgttt tcaatgaagt gaacgatatg aaagcccgtg
     3721 cccgagcggc tggcgaagat attattgact ttggcatggg caatcccgat cagccgacgc
     3781 cccgccatat tgttgagaaa ctggtggaaa ccgttgatga tccccggacc catcgctatt
     3841 cggcatcgcg tggtatccct ggcttgcgca aggcaattgc ggcttattac ggtaggcgct
     3901 ttaatgttga gattgatcat aattcggaag ccatcgtgac cttgggttcg aaagagggct
     3961 tggcgaattt ggcctcggcg atcacctctc cgggtgacgt aattttagtg ccaaatccaa
     4021 gctatccgat acatcagttt ggcttcatta ttgccggcgc ctccgtgcga aatgtgccgg
     4081 ttgctcccga cccagactat ctgaaggcgc tggagattgc cgttatccat tcggtaccaa
     4141 aaccgacggc tgtggtttta aattatccga ataacccgac agcgatcaca acggatcttg
     4201 atttttatgg gcaggtcgtt gatttttgta agcatcatgg catctatatc ctgtctgatc
     4261 tggcatacgc agaagtattt ttcgatgata atccgccgcc ttcaatcttg gaaattccgg
     4321 gtgcgcgaga tgttgctgtc gagtttacgt cgatgagtaa aacttattcg atgccgggct
     4381 ggcgcattgg ctttgcggct ggcaacaaaa ccatgattgc ggcactggcg cggatcaaat
     4441 cctacctcga ttacggcgca tttacgccga ttcaagtggc ggcgacagcc gcgctcaacg
     4501 gtcctcagga ttgcgtcgat gagatgcgtg acacgtatcg tgagcggcgc gacgttttga
     4561 tcgagagctt tggtgctgct ggctgggata ttccgagccc gccggcaacg atgttttcct
     4621 gggcgccgat tcccgacgcc tttgcctatc tggggtcggt tgagtactcg aaattactgc
     4681 tgcgtgaggc gcaagttgcg gtttcaccgg gggtcgcctt tggtgagcat ggtgacggcc
     4741 atgttcgggt gtcattggtt gaaaacaaac atcgcattcg ccaagccgca cggaatgtga
     4801 agaccttcct gggcgcatat gataaagtat tggaagaatc agaaaagcaa cgagcagcag
     4861 tgtcttgagt aaatcacctt tgagaattgg aattgccggg ctcggcacgg ttggtggcgg
     4921 gatcatcaag ctgctcaaca gccaggcggc tctcctagcg gcacgttgcg gccgggctat
     4981 tgaagtcacg gctgtgtctg cgcgcgaccg ctacaaagat cgcggcgtcg atttgtctgc
     5041 ctatacgtgg cacgatgatg cggttggttt ggcgtcagat gataatgttg acgtcgttgc
     5101 tgagcttatc ggtggtgaag atggcgtggt gaaagcttta gtcgaggccg caattgccaa
     5161 tggtaaacat atcgtcacgg ccaataaggc actcatcgcc cgtcatggca cggcgctggc
     5221 gaagtccgct gagactgcca atgtcaccct tgcctttgag gcggctgtag ctggaggtgt
     5281 cccgattgtt aaagcgatgc gggaagggct tgcagctaac accttctccc gggtgtttgg
     5341 cattctcaat ggcacctgta attacatctt gagcgaaatg cgtgagaccg gcaaagaatt
     5401 tgatgttgtg cttaaagaag cgcaagagct cggctatgct gaagttgatc cggcgtttga
     5461 tgttgatggc gtcgatgcgg cccataagct cgccatcctg accagcttgg catttggctg
     5521 tgaagtgaat tttgatgagg ttcatgttga aggcattcgc catatctcgc cgcttgatat
     5581 cgagtttgct gacgatttgg gctaccgcat taagttactt ggtatcgcac gccggaccga
     5641 caagggaatc gaacaacggg tgcatccttg catggtgcca cttgatgcac caattgccca
     5701 tatcgaggac gtctttaacg cggttgtcgt tgatggcgat catgtcgata ccaccatgta
     5761 tgagggcagg ggcgccgggg aagggccgtc cgcttcagcg gtagttgctg atatcatgga
     5821 tatcgctgcc ggccggctgc catgcgcttt tacgataccg gctgatcaat tatcaaaaat
     5881 gcaagttgcg ccgatttcgt cccatgttgg ttcttattat gtaaggttta tggtcgttga
     5941 taaacctggt gttttcgcaa cgatagccag tgcactgcac gaaaataacg tgtcgatgga
     6001 agctgtgctg cagcgtggcc gctctgaaaa tgaggccgtg ccggtggtta tgaccactca
     6061 cgaagctgac gaagcagcga tgatcgcaac cttagagacg atagaaaaaa atgacgcggt
     6121 ggtggaacca ccccgcctaa ttaggataga gtcattctag cggcttaaaa ataaaatttt
     6181 ataaaaggat taaaaaaatt ataggcgaat atacctccaa gatggaccgg aacttggcgt
     6241 tggaagcagt gcgtgtcacc gaagcggcgg cgctggcggc ttctcgtttg atggggcggg
     6301 gtgatgaaaa ggcagccgat caagcggcag ttgatgccat gcgccgggcg ctcaacagtc
     6361 tgcatatgca aggtacggtc cagatcggcg aaggtgagcg cgacgaagcg ccgatgctct
     6421 acatcggcga ggaagtcggc accggcgaag gtccaaaaat cgacatcgcc cttgatcctt
     6481 tggagggcac gacaattact gctaaaggcg gcaccaatgc cttggcggtt attgccatgg
     6541 cggaggaagg cggcttttta aacgcccctg atacttacat ggataaaata gccgtcggtc
     6601 atggtttgcc ggaaggcgtg gttgatctcg atgatagtgt tgcgaacaat cttacgaatc
     6661 tcgccaaagc caaagatatg gacatcggtg agctggtcgc ctgtattctg gaccgccccc
     6721 gtcacgaaga aatcattgcg aaaacccggg aatccggcgc ccgtatcatg ttgatcggtg
     6781 acggtgatgt ttcgggcgtg atcgcgacct ctaccgagga agccggcgtt gatatctata
     6841 tgggtacggg tggtgcgcct gaaggtgttt tggctgccgc tgctttgcgc tgtatcggtg
     6901 ggcaaatgca aggtcgttta gtcttccgca atgatgatga gcgcggccgg gcagaacgtc
     6961 ttggcatcac cgattacgac cgcaaatata atttaatgga actggctggt ggcgagacca
     7021 tgtttgccgc gaccggcgtg accatgggca ccatgctcaa aggtgtgcgc cggtttaaaa
     7081 atggcgccat gacccattcg ctgattatgc gctctaagtc cggtacagta cgctatatcg
     7141 aagccgagca taacttcgaa cgtaaaaccg ggttcgtgcc cgctgatggt tagccgtggc
     7201 tggcgcgccg acggataatc ttttctttga ggtcaagcac tcctgcacag gtaaacgatg
     7261 gctcgaaaga tccggtgatt cccgccatgc cttggctatc tcacaacagt ttcagctgcc
     7321 ggaaataatt ggccgctttt tggacacccg cgggattacc gccgatcagg tagaagcttt
     7381 cctcgatccc aaactcacgt cgtccttgcc
//
LOCUS       DASCNL010000452         1779 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000941750, whole genome shotgun sequence.
ACCESSION   DASCNL010000452 DASCNL010000000
VERSION     DASCNL010000452.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000941750"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="QF359_06110"
     CDS             complement(<1..266)
                     /locus_tag="QF359_06110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HJO86517.1"
                     /translation="MTMSIIKVIKRFLPKSLLGRSILIIVTPLILLQLVSAFVFYESH
                     WDKVSVRLARGLAGDIAAIVDLLAQNKTPEGRTAVIVLASNRFEL"
     gene            complement(278..979)
                     /locus_tag="QF359_06115"
     CDS             complement(278..979)
                     /locus_tag="QF359_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJO86518.1"
                     /translation="MSVENAHILVVDDDDRLRDLLKKYLSDNGFGVTAAEDTKAARAK
                     MASVAFDLIVLDLMMLNESGLEFTASLRQSGSPVADVPILMLTAMAETDDRITGLEAG
                     ADDYLIKPFEPRELLLRINSILRRVPQEVDELAPTEARLGEFVFDLEREELRHGDEMI
                     GLTSTEARLLKILAEKPGAIFSREYLMKLVVPDGGERTVDVQVNRLRRKIEPDARLPR
                     YLQTVRGQGYILRPD"
     gene            complement(997..1494)
                     /locus_tag="QF359_06120"
     CDS             complement(997..1494)
                     /locus_tag="QF359_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJO86519.1"
                     /translation="MDASTPETPKEKLEAAYSDAELRDAMELLFFSYRDFIGEPDAIL
                     NDYDFGRAHHRVIHFVGRNPDITVSDLLEILKITKQSLSRVLSQLIREDFISQEHGPT
                     DRRQRLLSLTGKGYALEEKLSAHQRTRIAEAFKAAGPEAVDGFYQVLLNMMNNPKEFN
                     RHETT"
     gene            1620..>1779
                     /locus_tag="QF359_06125"
     CDS             1620..>1779
                     /locus_tag="QF359_06125"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422859.1"
                     /note="catalyzes the transamination of the branched-chain
                     amino acids to their respective alpha-keto acids; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HJO86520.1"
                     /translation="MPSEGFHDRDGLIWYDGEMVEWRDANLHMLTHALHYASSVFEGE
                     RVYAGNIFK"
BASE COUNT          455 a          463 c          409 g          452 t
ORIGIN      
        1 agctcaaagc gatttgacgc caacacgata acagcggtgc ggccttccgg tgttttgttt
       61 tgagcaagca aatcaactat agccgctata tcgccggcca gtccacgcgc caaacgcaca
      121 ctcactttat cccaatggct ttcataaaag acaaatgccg acaccaattg cagtaggatc
      181 agcggtgtca caataatcag gatcgaccgt cccagcaaac tttttggtaa aaagcgttta
      241 attactttta taatcgacat tgtcatttat tacaccatca atccggccgc agaatatagc
      301 cctgtccgcg caccgtttgt aaatagcgcg gcaatctggc atccggttca atcttgcgcc
      361 ggagccggtt aacttggaca tcgacggtcc gttcaccgcc atccggcacc accaatttca
      421 tcaaatattc ccggctgaat atagcgccgg gcttttcggc gagaatcttc aacaatcggg
      481 cttcggttga agttaagcca atcatttcat cgccatgacg taattcctcc cgctccagat
      541 caaacacaaa ctcacccaag cgtgcctcgg tcggcgccaa ctcatcaact tcttgcggca
      601 cccggcggag tatgctgtta atgcgcagca acaattcacg cggttcaaag ggtttgatca
      661 gatagtcatc agcgccagct tcaagcccgg ttatccggtc atcggtctcg gccatcgcgg
      721 tcagcattag gatcggcacg tcggccactg ggctgcctga ctgcctgagc gaggcggtaa
      781 actcaagacc ggattcattt agcatcatca gatcaagcac aatgagatcg aaggcaacgc
      841 tcgccatttt cgcccgggct gctttagtgt cttcagctgc cgtgacgcca aagccattgt
      901 cgctgagata tttcttcagc aaatccctta agcggtcatc atcatcaaca acgaggatat
      961 gggcgttttc cacactcact ttagtttagc cttccgctaa gttgtttcgt gtctgttaaa
     1021 ttctttcgga ttattcatca tattcaataa tacttggtaa aaaccgtcga ccgcttctgg
     1081 tccggcggcc ttaaacgctt cagcgatgcg cgtacgttga tgggctgaaa gcttctcttc
     1141 caaagcgtag ccttttcccg tcagcgacag cagccgttgc cgccggtcag ttgggccatg
     1201 ctcctggcta ataaaatcct cgcggatcag ctggctcaat acccgcgata agctttgttt
     1261 ggtgattttc aaaatctcga gtaaatcact gacggtaata tccggattgc ggccgacaaa
     1321 atggataact cggtgatggg cgcggccaaa atcatagtca ttaagaatag catccggctc
     1381 gccgataaaa tcacgataag agaaaaacag cagttccata gcgtcgcgca gctcggcgtc
     1441 tgaataagcg gcttcaagtt tctcttttgg cgtttccgga gttgacgcgt ccattctgaa
     1501 ccttttcaat aacaatatac attttgaaaa ataagtcagt gttattgaca tatatgccag
     1561 ataacgctat ttgaagcaac atcatttcgt aaaacaataa aaactgggaa gataatttca
     1621 tgccaagcga aggttttcac gatcgtgacg ggttgatttg gtacgatggg gaaatggtgg
     1681 agtggcgcga cgccaatctg catatgctaa cgcatgccct gcattatgcg tcgagcgtgt
     1741 tcgaggggga acgcgtttac gccggcaata ttttcaagc
//
LOCUS       DASCNL010000453         1006 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000942272, whole genome shotgun sequence.
ACCESSION   DASCNL010000453 DASCNL010000000
VERSION     DASCNL010000453.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000942272"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(170..352)
                     /locus_tag="QF359_06130"
     CDS             complement(170..352)
                     /locus_tag="QF359_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86521.1"
                     /translation="MSTTGLKSGDVIVQANLKEIWQPKQLTKIITAAKNGGKAEILIL
                     IESPHGLRYSLLPLEK"
     gene            complement(488..841)
                     /locus_tag="QF359_06135"
     CDS             complement(488..841)
                     /locus_tag="QF359_06135"
                     /inference="COORDINATES: protein motif:HMM:NF024578.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HJO86522.1"
                     /translation="MKIILVILGVLAVWMGSARAETGFLGLEVQGFDKKVAKILDQKG
                     ILVKNVAIGEAGAIAGFRRGDLIIEFNRIKISNFDALLKGVLKTKPGQRIPVTGKRNG
                     CTVKLNLQSGKRPAS"
BASE COUNT          285 a          249 c          198 g          274 t
ORIGIN      
        1 aaaatcggcc aaataattaa cggcaatcgt gcgctggctc aacgtctggg aattaccggc
       61 actcctggct ttataattgg caatcaaatt tatccaggcg ctgcagatat ggcgacattt
      121 aaaagcctcg tcgccgcagc acgcaaaggc taatgcgtca aattaccagt tatttttcga
      181 gaggcaggag cgaataacgc aagccatgcg ggctttcgat caaaattaat atttctgctt
      241 tgccaccatt tttcgctgca gtaataattt tcgttagttg tttaggctgc caaatctctt
      301 tgagattagc ctgcacaatt acatcaccag attttaagcc ggtagtcgac aactttaggt
      361 ttgctgtcaa ccagggtgac aacgacgccc atcgagtccc agcgaagcgc tcgcgcactt
      421 ctttagtaat ggcggcaacg gtaatgccta tatccggtta attagcgaaa gaccctgtgg
      481 cgacttacta cgacgctgga cgcttacctg attgcaaatt caacttaact gtgcagccat
      541 ttcgtttccc cgttaccgga attctctgac ccggcttagt ttttaagact cccttcaata
      601 gcgcatcaaa attgctaatt ttaatgcggt taaattcaat gattaaatca cctcgccgaa
      661 aaccagcgat ggcgccagcc tcgccgatgg cgacattttt gaccaggata cctttctggt
      721 ctaggatttt ggcaactttt ttatcgaagc cctggacttc aaggccgaga aaaccagttt
      781 cagcgcgagc ggaacccatc cacacggcca atacgccaag aattaccaat attattttca
      841 tcaaccgaat cttcttcccg acaacttatc cagcaaataa agccataatt tggcacggct
      901 cataaaacct aacgcctaat aattatccaa acaatagaac ttttttgaaa aaatagttat
      961 tattcaatga ctttgtaaat ggatacgccc ttgcgaatgg ctcaag
//
LOCUS       DASCNL010000454         1265 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000944415, whole genome shotgun sequence.
ACCESSION   DASCNL010000454 DASCNL010000000
VERSION     DASCNL010000454.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1265)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1265)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000944415"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(301..624)
                     /locus_tag="QF359_06140"
     CDS             complement(301..624)
                     /locus_tag="QF359_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HJO86523.1"
                     /translation="MADTFKNREKGFEAKFKLDQETEFKIEARRNKLLGLWLAEKLGI
                     NESEIDSYVQEVVISDLEEPGIEDVIRKCMADIEAHGAKISEDDIRNKIEELTSEAHR
                     QVDRE"
     gene            766..>1265
                     /locus_tag="QF359_06145"
     CDS             766..>1265
                     /locus_tag="QF359_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HJO86524.1"
                     /translation="MCTFVILRRPGNDWPVIIGANRDEMKDRPWRPPGRHWSERFDIL
                     AGQDELAGGTWLGMNDFGLIAGVLNRRGSLGPKEGYRSRGELPLEALDHADAAAAAVA
                     LADINPNAYRPFNLVLADNRDAYWLRLTETHWGLHAEVKPIPAGISLITASDRNDTSS
                     ARIRTY"
BASE COUNT          316 a          287 c          264 g          398 t
ORIGIN      
        1 actcgcatta tcttcgcttt gtctccaaga atatcgaatt cctcagatgc agtatgactg
       61 gaaagttttt tcgatgaaac ttttcgatat ttgcgcttat tgactttcgc caacctcttt
      121 tcttcaataa gccgccatgg catttttgat gtttttatat tcattggaat aaaacccaaa
      181 tccgatcatt aactttgtaa ccgtatttgg attttttaaa gatgtcaatc gatagagaaa
      241 agtttgtaac tactttgcaa ctaaaatata taatgaaaac aatgattaag gtattatata
      301 ctattcccta tcaacttgtc ggtgggcttc tgatgtcaat tcttcaattt tgttgcgaat
      361 atcatcttcg ctgattttag cgccgtgcgc ctcaatatca gccatacatt tacggataac
      421 atcttcaatg ccaggttctt ccaaatctga aattacgact tcttgaacgt aactatctat
      481 ttctgattcg ttgatgccga gtttctcagc cagccaaaga cccagcaact tgttgcgccg
      541 cgcctcaatt ttaaattcgg tttcttggtc taatttaaac ttcgcttcaa aacctttttc
      601 gcgattttta aatgtatcag ccatattttt tattactcag atattcagtt gaaaattgac
      661 cctgtatgta gggttgtttt accgattatg caacacctca ctcgatgtca aattaagtga
      721 aaatgttatc tggtaatccg gctttcaaat cgctatctat gcataatgtg tacctttgtt
      781 attttgcgcc gccccggtaa tgattggccg gtcataatag gcgccaatcg ggatgaaatg
      841 aaagaccggc catggcgtcc gcctggccgt cattggtcag agcgctttga tatattggcc
      901 ggccaagatg agctggcggg cggtacttgg ctgggcatga acgattttgg actgattgcc
      961 ggtgtgctga accggcgcgg ttctttaggt cctaaagaag gctatcgcag ccgcggagaa
     1021 ctcccgttag aagctcttga tcacgccgat gccgcagctg ctgcagtcgc actcgcggat
     1081 atcaacccca atgcctatcg gccgttcaat ttggtattag ccgataaccg ggatgcctat
     1141 tggctgcggc tgacggaaac ccattggggg cttcatgcgg aagtcaaacc gataccagcg
     1201 ggtatttcac tgattacggc aagcgatcgc aacgatacgt cttcggcccg cattcgcact
     1261 tattt
//
LOCUS       DASCNL010000455         1738 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000949515, whole genome shotgun sequence.
ACCESSION   DASCNL010000455 DASCNL010000000
VERSION     DASCNL010000455.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000949515"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /locus_tag="QF359_06150"
     CDS             complement(<1..442)
                     /locus_tag="QF359_06150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HJO86525.1"
                     /translation="MAALQSANITVMIKAARKAARKLKRDYGEVDQLQVSSKGPADFV
                     TAADIRTEKMLKEELEYARHDYGFLMEEDGEITGNDPDRRWIIDPIDGTTNFVHGIPH
                     FAMSIALEENGEITAGVIYEPINEQMFWAEKGQGAFLNDRRMRVS"
     gene            complement(443..1012)
                     /gene="efp"
                     /locus_tag="QF359_06155"
     CDS             complement(443..1012)
                     /gene="efp"
                     /locus_tag="QF359_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003625750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HJO86526.1"
                     /translation="MKINGNAIRPGNVIEHQDRLWRAIKIQHTQPGKGGAYLQVELKD
                     LRSGTKLNERFRSSETVEQVRLEQKPFQYLYADGDMHTFMDTETYDQISLNADQISEE
                     RVIYLQDGMEVTIESFEGDPIGVELPAHVTLEVVDADAVVKGQTAASSAKPALLENGI
                     RTTVPPHIETGNRIVVNTEDGTYVERAKD"
     gene            complement(1131..1736)
                     /gene="thiE"
                     /locus_tag="QF359_06160"
     CDS             complement(1131..1736)
                     /gene="thiE"
                     /locus_tag="QF359_06160"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HJO86527.1"
                     /translation="MTPPKMIPDTFKDELAAALDGGDVACVQLRLKDAGRDDILKAAE
                     VLIPVAQERDVAFLMNDDPVLAKASSCDGVHIGQQDASYEEARKVLGDEAIVGVTCHD
                     SRHLAMEAAEKGADYVAFGAFFPTKTKDAKAHPDPEILKAWNMMTNVQSVAIGGITQG
                     NCGVLVKAGADFLAVVAAIWDYPDGPAAAVKAFNEAIAAAS"
BASE COUNT          379 a          452 c          460 g          447 t
ORIGIN      
        1 cggagacgcg catgcgccgg tcgttgagaa aagcgccttg gcctttttcc gcccagaaca
       61 tttgttcgtt gatcggttca taaataaccc cggcggtaat ctcgccattt tcttcgagcg
      121 cgatagacat ggcaaaatga gggatgccat ggacgaaatt tgtcgtgcca tcgatagggt
      181 cgatgatcca gcggcggtcc ggatcattgc cggtaatctc gccatcttct tccatcagaa
      241 agccataatc gtgccgcgcg tattcaagct cttctttaag cattttttcg gtgcggatat
      301 cggcggcggt gacaaagtca gctggccctt tgctggatac ttgcagctga tcaacttcac
      361 cgtaatcgcg ttttaatttg cgggcggcct tgcgcgccgc cttaatcatg accgtaatat
      421 tggctgattg gagggctgcc atctagtctt tggcccgctc gacataggta ccatcttcgg
      481 tgttgacgac aatacggttg ccggtttcaa tatgcggcgg caccgtggtg cgaataccgt
      541 tttccagcag cgccggcttg gcgctggagg cggcagtttg gcctttgacg acggcgtcgg
      601 catcgacaac ttccaaagta acgtgggccg gtaattcgac cccaattgga tcaccttcaa
      661 aactttcaat cgtgacttcc atgccatcct ggagatagat cacgcgttct tcgctaattt
      721 gatcagcgtt cagcgatatc tggtcatagg tttcagtatc catgaaggtg tgcatatcac
      781 catcggcata gagatattga aacggttttt gctcaaggcg gacctgttca actgtttcag
      841 acgagcgaaa gcgctcattg agcttggtgc cgctgcggag gtctttcaat tcgacctgca
      901 aataggcacc gcccttgcca ggttgcgtat gctgaatttt aatcgcccgc cacaagcgat
      961 cttgatgttc gatcacattg ccggggcgaa tggcatttcc attgattttc atgacttaaa
     1021 ccatcttaaa ttttggcgtt attttgattt tttccgttga aggcgcggaa cctaacaggt
     1081 tgcagagcgc cgagcaataa caatggcaac gggggaatgg ggagacgaga ttagcttgct
     1141 gccgctatcg cctcattaaa cgctttaacg gcggcggcgg gaccgtccgg gtaatcccaa
     1201 atagccgcga cgacggcgag gaaatcagcg ccggctttga ccagaacgcc gcaattacct
     1261 tgggtgatac cgccgattgc caccgattgt acattggtca tcatattcca ggctttgagg
     1321 atttccggat cagggtgggc tttggcatct ttcgttttgg tcgggaaaaa agcgccaaag
     1381 gcaacataat ccgcaccctt ttcggcggct tccatggcga gatggcggga gtcgtggcag
     1441 gtcacgccga caatcgcctc atcgccgagg acttttcggg cctcttcgta ggacgcatcc
     1501 tgttgaccga tatggacacc atcgcaacta cttgctttgg cgagcaccgg atcatcgttc
     1561 attaaaaagg cgacatcgcg ctcttgagcc acggggataa gaacttccgc cgcctttaaa
     1621 atatcatccc ggccggcgtc tttaaggcgc aattggacac aggcgacatc tccgccatcc
     1681 aatgctgccg ctagctcgtc tttaaaagta tctggtatca tttttggcgg cgtaatca
//
LOCUS       DASCNL010000456         1306 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000955889, whole genome shotgun sequence.
ACCESSION   DASCNL010000456 DASCNL010000000
VERSION     DASCNL010000456.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000955889"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="QF359_06165"
     CDS             <1..352
                     /locus_tag="QF359_06165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86528.1"
                     /translation="NLPAQPVTSKIRKKAPQNAPLKIANTPPPASAPKPTPIEPLGKE
                     TIINGPAGKDKGVIDRIVDGVTGTFKSDKSVTPVEPAKPSTKSAAKPAKDQPKNDQDD
                     GFIDRMWKSVTNIF"
     gene            complement(365..796)
                     /locus_tag="QF359_06170"
     CDS             complement(365..796)
                     /locus_tag="QF359_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HJO86529.1"
                     /translation="MIVSQILREKGHDVYTVFKEISVKEVSALLAEKRIGAVVVTDQA
                     DAVEGIISERDVVRGLAQHGSSILDKKVEELMTKNVITHGLDDHIDDLMQEMSKSRIR
                     HLPILDDGKLVGVISIGDVVKNRVEELEAEGNMLRDYIATG"
     gene            complement(1048..1164)
                     /locus_tag="QF359_06175"
     CDS             complement(1048..1164)
                     /locus_tag="QF359_06175"
                     /inference="COORDINATES: protein motif:HMM:NF014003.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HJO86530.1"
                     /translation="MIDPGVGGDRPGVIVEVDGQCFVGPGNGLFEMIFPCYL"
     gene            complement(1161..1295)
                     /locus_tag="QF359_06180"
     CDS             complement(1161..1295)
                     /locus_tag="QF359_06180"
                     /inference="COORDINATES: protein motif:HMM:NF014003.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HJO86531.1"
                     /translation="MIEFAPEEPIFDLFSDVPSQNPKTAAYLLAAYAGTFPKGSIFVV
                     "
BASE COUNT          400 a          316 c          264 g          326 t
ORIGIN      
        1 taatctgccg gcccagccgg taacgtctaa aatccgcaaa aaggcaccgc agaatgcgcc
       61 tctgaaaatt gccaatacgc cgccgccagc gagcgctcca aagccgacgc caattgaacc
      121 gctcggtaag gaaacgatca ttaatgggcc agctggtaag gataaagggg tgattgaccg
      181 tatagtcgat ggcgtgacag gtacctttaa atcagataaa tcagtaacgc ctgttgaacc
      241 cgctaaaccg tcaaccaaat cggcggcaaa accggcaaaa gaccaaccta aaaatgatca
      301 ggatgatggt ttcatcgatc ggatgtggaa aagcgttacg aatatttttt agccaagtat
      361 ccggctagcc ggtggcgata taatcgcgca acatgttgcc ttccgcctcg agttcttcaa
      421 cccggttttt cacgacgtcg ccaatactga taacgcctac gagtttgcca tcatctaaaa
      481 tcggcaggtg acggatgcgg ctttttgaca tttcctgcat aagatcatca atatgatcat
      541 ccaagccatg cgtaatgaca ttcttggtca tcagttcttc tactttttta tcgaggatac
      601 tactaccgtg ttgagcaagg ccgcgaacaa catcacgttc agagataatg ccttctacag
      661 catcggcttg atccgttaca accacggcgc caatccgctt ttctgctaat agtgccgaaa
      721 cttcttttac cgaaatttcc ttaaagacgg tataaacatc gtggcctttt tctctgagta
      781 tttgagatac aatcataacc agactcctgt ctaagttgac caatccccca aaattttctc
      841 ccccacgtct ttataatata cgtcgaatct aaattaagtt atatcgctta ttttacgata
      901 gttcgatcag gaaaaattgt tgtaataaag aaaaaacaac ccatttctgt attgagaagg
      961 cagtaaatat tgaaaattca tatatttagc gaagaaatag cgtaaactaa aaatgatcaa
     1021 aagggtagtt aaccccttac gacaggacta caaatagcat ggaaaaatca tctcgaataa
     1081 cccgttacca ggaccgacaa agcattgacc gtcgacctca acgatcactc caggccggtc
     1141 accaccaaca ccgggatcaa tcacacaaca aatattgagc ccttgggaaa agtcccggca
     1201 taagcagcca acaaatatgc agcggttttt gggttctggc tgggtacatc ggaaaataga
     1261 tcgaagatcg gctcttctgg cgcaaattcg atcagttttg ctttca
//
LOCUS       DASCNL010000457         2640 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000956138, whole genome shotgun sequence.
ACCESSION   DASCNL010000457 DASCNL010000000
VERSION     DASCNL010000457.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000956138"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /gene="yacG"
                     /locus_tag="QF359_06185"
     CDS             <1..197
                     /gene="yacG"
                     /locus_tag="QF359_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HJO86532.1"
                     /translation="PTKNNGKRECPNCGQPTMPKFRPFCSARCSQLDLSNWLNEDYRV
                     PVVEIDDFDEDDFPDEEFEN"
     gene            260..634
                     /locus_tag="QF359_06190"
     CDS             260..634
                     /locus_tag="QF359_06190"
                     /inference="COORDINATES: protein motif:HMM:NF016162.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HJO86533.1"
                     /translation="MLGGETIAESSNVTFVFETGMSTRYYLPMDDIRMTALTRSETTT
                     RCPYKGIASYWSVEAGGLVFDDIVWSYSEPLEEAPKLKNLLYFFNENIDAILIDGKKQ
                     KQAKTKWFKLLVKTLDGPEHIV"
     gene            complement(638..1327)
                     /locus_tag="QF359_06195"
     CDS             complement(638..1327)
                     /locus_tag="QF359_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014753079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HJO86534.1"
                     /translation="MTAVLEKIGLTRPQVAWRIAQEIDEGSYVNLGIGSPEMVANYVP
                     TDREIVFHSENGILGMGEAPAPGQEDGNLINAGKKPVTLLPGGSYFSHTDSFVMIRGG
                     HIDVCVLGAYQVAKNGDLANWATLDTSKPPGVGGAMDLAVGAKRIFVMMDHCTKTGKP
                     KLMNKCTYPLTGSRVVRTVFTDLAVIDVTEDGFVVREITAGVSFEELQEKTDAVLTLS
                     ENWQTLAPPDV"
     gene            complement(1355..2092)
                     /locus_tag="QF359_06200"
     CDS             complement(1355..2092)
                     /locus_tag="QF359_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HJO86535.1"
                     /translation="MDFAAIGYDLYLIDHLGLASYSTPMIDKSVNNISAAVADIQSGS
                     VVLSSGFGDAGAPVDLLEALIETDAENLTIVSNNAGEGNYGLAALIAARKVSRVICSY
                     PISAGSVVFQDCYQAGEITLEVIPQGTLSERMRAAGAGIGGFFTPTSAGTELGKSKEC
                     RKISGVEHVFEYPLKGDIALIRATRADRWGNIVYDKSARNFGPVMAMAATLTIVQVDE
                     IVDLGKLNPELIITPGIFVDRVFVHNG"
     gene            complement(2179..>2640)
                     /locus_tag="QF359_06205"
     CDS             complement(2179..>2640)
                     /locus_tag="QF359_06205"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HJO86536.1"
                     /translation="GETVHLSVWGDHGPIVIHREVPLVPIALNLAVGSNLPLLRTASG
                     RVFLSWLDKKQTEPLLQHEMRRMGKRNKTEIKAIQAETLRQGLGRTVGDFSPSIASLS
                     APVFNHEGHLSAAIATFGYEGSFDDRPTGNVAKRLGAAAREVSEKLGFNET"
BASE COUNT          706 a          684 c          595 g          655 t
ORIGIN      
        1 agccaactaa aaataatggt aaacgcgaat gcccaaattg tggccaaccg accatgccta
       61 aattccggcc attctgttcg gcccgctgct cgcagcttga tctctcaaat tggctaaatg
      121 aagattaccg cgtaccagtt gttgaaattg acgattttga cgaagatgac tttcctgatg
      181 aggaatttga aaattagttt acaggcgtga tccctacaag cacgttggtg cgattaggag
      241 tagccgcaat gttaaagttg tgctcggtgg cgaaaccatt gctgaaagct caaatgtaac
      301 ctttgtcttc gagaccggaa tgtcgacccg ttattattta ccgatggatg atatccggat
      361 gacagcactg acacgctcgg aaacaacaac gcgatgtccc tataaaggta tcgccagtta
      421 ctggtcggtc gaagctggtg gactggtttt tgatgacata gtgtggagct attcggagcc
      481 actagaagaa gcaccgaagc tcaagaacct gctttacttt tttaatgaaa atattgacgc
      541 tattttgatt gacggtaaaa aacaaaaaca agctaaaacc aaatggttta aattattagt
      601 taaaactttg gatggcccag aacatattgt ctgaagctta aacatcgggc ggagctaagg
      661 tttgccagtt ctcagataac gtcagcactg cgtcagtttt ttcctgcaac tcctcaaagg
      721 aaacgccggc agtaatttcc cgcaccacaa aaccatcttc agtcacatca atgaccgcca
      781 gatcggtaaa caccgttcgg accactctgg agccggtgag cgggtaggtg catttattca
      841 tcagcttcgg tttgccggtt ttagtgcagt ggtccatcat tacaaatata cgcttagcac
      901 cgaccgccaa atccatggca ccgccgaccc cgggtggttt tgaagtgtcc agggttgccc
      961 aattggcgag atcaccgttt ttcgcaactt gataagcacc gagaacacaa acatcgatgt
     1021 gaccgccacg gatcataacg aatgaatccg tatggctaaa ataactgccc cccggcagca
     1081 gtgttactgg tttctttcca gcattgatca gattgccgtc ttcctgacca ggagccggag
     1141 cctcgcccat gcccaaaata ccgttttcac tgtggaatac aatttcgcga tcggtgggaa
     1201 cgtaattggc caccatctca gggctgccga tgccgagatt aacataacta ccctcgtcaa
     1261 tttcctgggc aatgcgccag gcaacttgtg ggcgagttaa accaattttt tccagtaccg
     1321 ctgtcatgtt aaatttccca ctttatctgc tgttctagcc attatgcaca aatacccggt
     1381 caacaaaaat acccggtgta ataataagtt ctggattgag tttgccaagg tcaacgatct
     1441 catccacttg gacaatcgtc agtgtagccg ccatcgccat taccgggcca aaattgcggg
     1501 ctgatttatc gtaaacaata tttccccaac gatccgcccg cgtcgcgcgt atgagtgcta
     1561 tatcgccttt aagcggatat tcaaacacat gctcaacgcc actaattttg cgacactctt
     1621 tgctttttcc aagctcggta ccggctgagg tcggcgtaaa aaagccacca ataccagctc
     1681 cggctgcgcg catcctttca ctcaacgtgc cctgtggaat aacttcaagc gtaatttcgc
     1741 cagcctgata acagtcttga aacaccaccg agccagcgct aatcggataa gaacaaataa
     1801 cacgagacac ttttctcgcc gcaatcaaag cagccagacc gtaatttcct tccccggcat
     1861 tgtttgagac aatggtgaga ttttcggcat ccgtttcaat tagtgcttcc agcaaatcaa
     1921 ccggtgcgcc agcatcacca aagccactgc tcaggaccac tgatccgctc tggatatccg
     1981 caacggcggc tgaaatatta ttcacacttt tatcaatcat gggagttgaa taagaggcta
     2041 ggccaagatg gtcaatcaga taaagatcat aaccgatagc tgcaaaatcc accactacca
     2101 gccagtctat tcgattaata aaaagtattg gcggcgacat cgagtagggt aggcgctcac
     2161 ctgatcttaa ttctggtctc aagtttcatt aaagccaagt ttttccgaca cttcccgtgc
     2221 agctgccccg agacgtttcg ccacattgcc cgtcggccgg tcatcaaacg aaccctcata
     2281 gccaaaggtg gcgatagccg cggatagatg gccttcgtga ttaaacaccg gtgccgacag
     2341 cgacgcgata ctgggtgaaa aatcaccaac agtccgcccg agcccttgcc gcaatgtctc
     2401 agcctggatc gcttttatct cagttttgtt acgtttaccc atgcggcgca tttcatgttg
     2461 cagcaacggc tcggtttgct ttttgtcgag ccaggataaa aacacccgtc cagaagcggt
     2521 gcggagaagt gggaggttcg atccaactgc aaggttaagc gctattggca ccaacggtac
     2581 ttcgcggtgg atgacgatgg ggccatgatc tccccatacc gacaagtgaa cggtttcacc
//
LOCUS       DASCNL010000458         3773 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000957147, whole genome shotgun sequence.
ACCESSION   DASCNL010000458 DASCNL010000000
VERSION     DASCNL010000458.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3773)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3773)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3773
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000957147"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="QF359_06210"
     CDS             <1..584
                     /locus_tag="QF359_06210"
                     /inference="COORDINATES: protein motif:HMM:NF012791.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HJO86537.1"
                     /translation="EDINTPSVHWVQKIGREDEIVSRGGRISDLTIMARPKSDTERPS
                     LMTLHAAIFETGKPVLIVPPEMPTEMGRRILVAWNGTSEAAAAVAAALPFLKDAEEIT
                     VLTIETEKALNRISGEELLRNLAWHGVSATTLGVSPGTETVGATILAQCEQMNADLLV
                     TGAYTHSRLIQIILGGDTRHIITEAKISVLAAH"
     gene            complement(621..1229)
                     /locus_tag="QF359_06215"
     CDS             complement(621..1229)
                     /locus_tag="QF359_06215"
                     /inference="COORDINATES: protein motif:HMM:NF014626.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HJO86538.1"
                     /translation="MCSRFEINNTFENVVLRFDISANAAFIPEFAPIAEVRPTNKVPI
                     ITNDRQILPLRWGLKVDWDNKPIINARAETLAEKRTFQPLLENRCLVPATAYFEWRKD
                     EKLKIKTRIQSNNGELVAFAGLIDDDTFTIITCQPSPSIAYIHGRMPVILDPASEAVW
                     LSADNAYEDVAKLLTPYPDERLETEEIANLPTKEKKQGDLFG"
     gene            1294..2034
                     /locus_tag="QF359_06220"
     CDS             1294..2034
                     /locus_tag="QF359_06220"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86539.1"
                     /translation="MKKGRKTAIVTGASRGIGHATAMLFLERDWRVLTCSREDTPAEC
                     GRDKNWTAHIPVDLADADSVANFVDRANQELDGEPLNALVNNAGMSPKADNQERLGCL
                     NGDIDAWRDVFELNFFAPLKLGRGFAAALHKGRGAIVNVTSIAGHMIHPFAGSAYSSS
                     KAALSALTREMANEFAALEVRVNAVSPGEISTSMIQPEYEMLIPRIPMNRMGTPEDVA
                     RTIYYLCSEDSEYVTGTEIWVTGGQHMS"
     gene            2068..2691
                     /locus_tag="QF359_06225"
     CDS             2068..2691
                     /locus_tag="QF359_06225"
                     /inference="COORDINATES: protein motif:HMM:NF012273.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO86540.1"
                     /translation="MSLKIYGTPASRTSRVIWLAFELGIDFDNDPVNPRKGETRTPEY
                     LAVNPNAHVPSMKDGDLVLWESLAINLYLAKKHASDISPNGPEEDALATQWSMWGLNE
                     IEPYSIFLIQNSRKPEDQQDHARAEESFEILKSPMKVLDNKLAEGDWLMGGRFTVSDL
                     NVASVMGPLRPVKFDFEPFHNVAKWFLACSSRPAAAKARELQMAQVD"
     gene            complement(2688..3254)
                     /locus_tag="QF359_06230"
     CDS             complement(2688..3254)
                     /locus_tag="QF359_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86541.1"
                     /translation="MYSDNTLTPREAVRLCALGTLAGSSAAGEPMSYDDLVHAVRHFV
                     SRVTGPSLELMGESIELLRYEGLVEAEDDTGETNPALTITTAGEEVLDALLRANIRAG
                     SSDLNELVIALKFRFLHQLPAAEQVNQIDLMFEVCESELARFEDLRRYHEDDTGHLTG
                     WLDLDISRLESRLDWLTEFKSKLEPSGL"
BASE COUNT          937 a          902 c          962 g          972 t
ORIGIN      
        1 ccgaagatat taatactccc tccgttcatt gggtccaaaa aattggccgg gaagacgaga
       61 ttgtgtcgcg tggtggccgc atttcggatt tgacaattat ggcgcggcct aaatctgata
      121 ctgaacgccc ctccttgatg acccttcatg ccgctatatt tgaaacgggt aagccggttc
      181 tcattgtgcc gccggaaatg ccaactgaaa tgggtaggcg tatattggtt gcctggaatg
      241 gcacttcgga agctgcagct gccgttgcgg cggcgctgcc gtttcttaaa gacgcggagg
      301 agatcacggt tttgacgatt gaaactgaga aagctctcaa tcgtatcagt ggagaggagt
      361 tgctgagaaa tctcgcctgg catggcgttt cggcaaccac cctcggtgtg agccctggga
      421 ctgaaacggt gggcgcgacg atcttggcgc aatgtgaaca gatgaatgca gacttgctgg
      481 tcaccggtgc ctacacccat agccggttga ttcaaattat tctcggtggc gatacccgcc
      541 atattatcac cgaagctaaa atctcggtac tggccgcgca ctaatgttat aaagtgtact
      601 aagtacactt tataacaatg ttaaccaaac aaatcaccct gctttttttc ttttgtcggc
      661 aggttggcga tttcctcagt ttcgagtctt tcatccggat acggtgtcag caatttggcg
      721 acatcttcat aggcgttgtc ggctgatagc cacaccgcct ctgacgcagg gtcgaggatt
      781 accggcatcc gtccatgaat ataggcaatg ctcggactgg gctggcaggt aatgatagtg
      841 aacgtatcgt catcaatgag cccggcaaaa gccaccagtt ctccattgtt tgattgaatg
      901 cgggtcttta ttttgagctt ttcgtccttg cgccattcga aataggcggt cgccggcacc
      961 agacagcgat tttccaataa cggctgaaag gtccgctttt ccgccagggt ttcagcccgt
     1021 gcattgataa ttggtttgtt gtcccagtcg actttgagcc cccagcgaag tggcaaaatc
     1081 tgccgatcat tggtaataat cggcactttg ttggttggcc gcacttccgc aatcggtgca
     1141 aactcaggta taaaggcggc attggctgag atatcaaatc tcaggacaac attttcaaac
     1201 gtattgttaa tctcgaagcg tgagcacata acccatacaa ccaatataat ctatctactg
     1261 gaaacttacg tcattttggc ctaaagctta agcatgaaaa agggaagaaa aaccgcaatt
     1321 gtcaccgggg ccagccgggg gattggtcac gccacagcca tgctgttctt agagcgcgac
     1381 tggcgggtgc ttacgtgttc gcgtgaagat acaccggcag aatgcggccg cgataaaaat
     1441 tggacggcgc atattccggt cgatcttgcc gatgccgaca gcgtcgctaa tttcgttgac
     1501 cgcgccaatc aagagctaga cggtgagccg ctcaatgcat tagtcaataa tgccggcatg
     1561 tcgccgaagg ctgacaacca ggaacggctc ggctgcctca atggcgatat cgatgcgtgg
     1621 cgggatgtgt ttgagcttaa tttctttgcg ccactaaaat tagggcgggg ctttgctgca
     1681 gcgctgcaca aagggcgggg tgccattgtt aatgtgacgt ccatcgccgg tcatatgatc
     1741 catccctttg ccggctcagc ctattcgagc tccaaagctg cactctcggc gctgacccgg
     1801 gaaatggcaa acgaatttgc cgcccttgaa gtgcgggtca acgcagtgtc gccgggtgaa
     1861 atttccacct cgatgatcca gcccgaatat gaaatgttaa tcccacgtat cccgatgaac
     1921 cggatgggca caccggaaga tgtcgcccgg acgatttatt atttatgctc cgaggattca
     1981 gaatacgtca ctggcaccga gatttgggtt accggcggcc agcacatgtc ttaggaaaaa
     2041 taaaatttaa taattgggga gaagtaaatg tcgctgaaga tttatggcac accagcctcg
     2101 cgcaccagcc gggtgatttg gctagccttt gaactgggta tcgattttga caacgatccg
     2161 gtcaatcctc gcaaaggcga aacgcgtacg ccagagtatt tagcggttaa tcccaacgct
     2221 catgtgccgt cgatgaagga tggtgatctg gttttgtggg agagcctggc gatcaacctt
     2281 tatctcgcca aaaagcacgc ctctgatatt tcaccgaacg gcccggaaga agacgcactg
     2341 gcgacccagt ggagtatgtg gggcttaaat gagattgagc cgtattcgat ttttctgatc
     2401 caaaactcac gcaaaccgga agatcagcag gatcatgccc gcgcagaaga gtcgttcgaa
     2461 attctcaaat caccgatgaa ggtattggac aataaattgg ccgagggaga ctggttaatg
     2521 ggcgggcgct ttaccgtctc tgatcttaac gttgcgagtg ttatgggccc cttgcggcca
     2581 gttaagtttg attttgagcc gtttcataat gttgctaaat ggtttttggc ttgctcatcc
     2641 cgcccggctg cagccaaagc gcgcgagctg caaatggcgc aagttgatta gagtccgctg
     2701 ggttctagtt tagatttgaa ctcagtcagc caatccaggc gggattcaag gcggctgata
     2761 tcaagatcca gccagccggt gagatgtccg gtatcatctt catgataacg acggagatct
     2821 tcaaatcgcg ccaattcaga ctcgcagacc tcgaacatca gatcgatttg atttacttgt
     2881 tccgctgccg gtaattgatg cagaaaacgg aatttaagcg caatcaccaa ttcattgaga
     2941 tcactgctgc cggcgcggat gttggcgcgc aataaagcgt cgagaacttc ttcacccgcg
     3001 gtggttatgg tcagggcggg attagtttca ccggtgtcgt cttcggcttc gaccagacct
     3061 tcgtagcgca gcaactcgat cgattcaccc attagctcta gcgacgggcc ggtgacgcgg
     3121 ctgacgaagt ggcggacggc gtggacgaga tcgtcataac tcatcggttc accggctgcc
     3181 gaactgccgg ccagcgtccc caaggcacaa agtcgaaccg cctctctcgg cgttaaagta
     3241 ttatcactat acatgatcgg ttatgataat atagcctaag tccttggtag gaaatttatt
     3301 tagttggata ttcggtaaga aaataacaaa tggaggataa cttttgaaaa agtatccccc
     3361 gtctggtgtc gtcgttgtta ctgctagaat ctagcactta atttctgcag ttttttcaag
     3421 cttggcgatt tcggctttaa actctgctaa aacattttcg cagtcgatac ctttggccgc
     3481 ggcttttttc atccatgtag cctggatcgg cacccacatt ttcttcctaa ctctgggggg
     3541 aggaaattac acactgattc gatgaaaatt gaacttattt aaggtgtttc aacggaccaa
     3601 aaaataaaac ctttgtactt accaactcgc tgaaaaaaaa tatagtataa tcaatagctt
     3661 acatcctcaa ttatcttcta aaaaacccct tgaatagatt gcaaaaaggc gttttttttt
     3721 gctataaata agggatggaa aatacgtttt ttttagcctg ttttggcgct gat
//
LOCUS       DASCNL010000459         1133 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000958726, whole genome shotgun sequence.
ACCESSION   DASCNL010000459 DASCNL010000000
VERSION     DASCNL010000459.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000958726"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..188)
                     /locus_tag="QF359_06235"
     CDS             complement(<1..188)
                     /locus_tag="QF359_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86542.1"
                     /translation="MMLQAENDDLMIFFRTAFFGFIALAATLFLAAFHPSEAGVFNPK
                     TFTLKNGMQVVVISNHRAP"
     gene            complement(305..886)
                     /locus_tag="QF359_06240"
     CDS             complement(305..886)
                     /locus_tag="QF359_06240"
                     /inference="COORDINATES: protein motif:HMM:NF022679.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3035 domain-containing protein"
                     /protein_id="HJO86543.1"
                     /translation="MQNKYYPLFAVLAAAILLSGCEGAKRALGQTKEAPDEFAVYRRA
                     PLSLPPRYGLKPPTPGAERPQAVNPRDRAVQALGTGQQQAQPRQVGSTGDTSRLSQGE
                     RSVLRLTGATNADSFIRVQISKETSVLAHESITITDKIAFWQKPREFGTTVDATKEAK
                     RIRENQALGKPLNQGEVPTIKRKSKALLEDVFK"
     gene            complement(903..>1133)
                     /gene="lspA"
                     /locus_tag="QF359_06245"
     CDS             complement(903..>1133)
                     /gene="lspA"
                     /locus_tag="QF359_06245"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HJO86544.1"
                     /translation="NKRMAAGLGLIIGGALGNVIDRGLHGAVVDFLDFYIETLHWPTF
                     NIADSCITVGAILLILDSLFSRKPEQAKIEDK"
BASE COUNT          284 a          268 c          287 g          294 t
ORIGIN      
        1 ggcgcccgat ggtttgaaat tacaactact tgcatgccat tttttaaagt aaatgtcttt
       61 gggttaaaga ctccggcctc agagggatga aaggcagcca gaaatagtgt tgccgccaac
      121 gcaataaacc caaaaaaagc tgttctaaaa aagatcatta aatcgtcatt ttccgcctgt
      181 aacatcatat ctatgaacga taatagagca ccatttcggc gcactattaa gatttaaatt
      241 aaatatagac cagcagacgc aatattacag atgtctcgcg cggaaatcgc atgaaagtga
      301 aggtctattt aaatacatct tcgaggagcg ccttgctttt acgcttgatg gttgggactt
      361 cgccctgatt gagcggtttg ccgagagctt ggttctcgcg gatgcgtttg gcttccttgg
      421 tcgcgtcgac tgttgtgccg aactcgcgtg gtttttgcca gaaagctatt ttatcggtga
      481 tggtaatact ttcatgggct agcaccgaag tttctttaga tatttgcacc cggataaaag
      541 aatcagcgtt ggttgcgccg gttaatcgta gaacggatcg ttcgccttgg ctcagacgcg
      601 aggtgtcacc ggtgctgcca acctgccgcg gttgtgcttg ttgctgcccg gtgccgagtg
      661 cctggacggc gcgatcacgc gggttaactg cctgaggacg ttccgcgcct ggggtcggtg
      721 gttttaaacc atacctcggc ggcagactca aaggagcgcg ccggtagacg gcaaattcat
      781 ccggtgcttc cttggtttgg ccgagcgccc gcttagctcc ctcgcaacca ctcaacaaaa
      841 tggcggcggc aagtacggcg aatagcggat aatatttatt ctgcatagca atcatggtct
      901 ttctacttat cttctatttt agcctgttcg ggctttcgag aaaatagcga atccaaaatt
      961 aagagtatag caccgacggt aatacaacta tcggcaatgt taaaggtagg ccaatgcagt
     1021 gtctcaatat aaaaatctag aaaatcgacc accgcgccgt ggaggccgcg atcaatcaca
     1081 ttgccgagcg cgccaccgat aatgaggcca agtccggctg ccatgcgttt att
//
LOCUS       DASCNL010000460         1578 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000959589, whole genome shotgun sequence.
ACCESSION   DASCNL010000460 DASCNL010000000
VERSION     DASCNL010000460.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000959589"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..600
                     /locus_tag="QF359_06250"
     CDS             <1..600
                     /locus_tag="QF359_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HJO86545.1"
                     /translation="SKVKILKPLEVGSKITRLSTINDVTIKEGRTGTLVFVEIDHQVS
                     GNNGTAVTELQTIVYRGTAAQQSETPARKPQPKPLPEGALWSETVTPDTVLLFRYSAL
                     TFIGHRIHYDREYTVNEEGYPALLVHGPLTATMLLDLARRNLPNSEITGFNVRASGPL
                     FDNASFSLHGKLDDSGAKVELWTVNHEGELSMSVTANIG"
     gene            complement(614..>1578)
                     /locus_tag="QF359_06255"
     CDS             complement(614..>1578)
                     /locus_tag="QF359_06255"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HJO86546.1"
                     /translation="TGQGAAIDTIGLNEDDICFSASKMFHSYGFGNVLTFPLYIGCSA
                     VLTDRRVSPKMTFEIIEQFKPTVFFGIPTLYAQQLEYMNSHPTDASSLRVCVSAGEAL
                     PGDIFNRWQEKTGTLILEVYGSTEVLHAVLGNTAAAHKPGSSGLVVDRYEARIVDDDG
                     NKVEQGDIGTVHIRGGSVAKYYWNSPEKTAATMLPDGWLSMGDNSYQDEEGWYFFCGR
                     GDDMLKIGGLWCSPFEIEARLIEHPSVLEAAIVGRSDENELIKPEAWVILSEGVEENE
                     ALLEELKEHCVSGLSHYKYPRWYKFVDELPKTATGKIQRFKLRD"
BASE COUNT          384 a          428 c          394 g          372 t
ORIGIN      
        1 agtaaagtca aaatcctcaa gcccctcgaa gtcggcagca agataacccg gctatcaaca
       61 atcaatgatg tcacgatcaa agaaggccgc acaggcacct tggtttttgt tgagattgat
      121 catcaggtct ccggcaataa tggcaccgcc gtaactgaat tacagactat tgtctatcgc
      181 ggtacagcgg cacaacaatc ggaaactcct gccagaaaac ctcagccaaa gcccctaccc
      241 gagggcgccc tgtggtccga gacagtgacc cctgacacgg tgttgttgtt tcgctattcg
      301 gcattgactt tcatcggcca tcgcatccat tacgaccggg aatataccgt caacgaggaa
      361 ggttacccgg cgcttttggt acatggtcct ctgacggcga caatgctgct ggatttagct
      421 cggcgtaatt tgcctaatag cgagatcacc ggcttcaacg tgcgtgccag cggtccactg
      481 ttcgacaatg cgtccttttc ccttcatggc aaacttgatg acagcggagc aaaagttgag
      541 ctttggacgg tcaatcacga aggcgagcta tcgatgagcg ttactgccaa tatcggctaa
      601 acctggctcg attttaatcc cgcaatttaa agcgctgaat tttgccggtt gcggttttgg
      661 gcagctcatc gacaaattta taccagcgtg gatatttata gtgcgatagc ccggacacgc
      721 agtgctcttt tagctcttcg agcagcgctt cgttttcttc gacgccttca cttaaaatga
      781 cccaggcttc cggcttgatc agttcgtttt cgtccgaacg tccgacaata gctgcttcga
      841 gcacactggg atgctcgatc agtcgcgcct cgatctcgaa cggtgagcac cagaggccgc
      901 caatcttcag catgtcgtca ccccggccac aaaagaaata ccagccctct tcatcctggt
      961 aagaattatc acccatgctg agccagccat ccggtaacat ggtagcagcg gttttctccg
     1021 ggctgttcca atagtattta gcgaccgagc cgcctctgat atggaccgtg ccgatatcgc
     1081 cttgttcaac tttattgccg tcatcatcga caatgcgggc ttcgtagcgg tcaacaacga
     1141 gcccggatga tcctggttta tgggcagccg cggtattgcc gagcacggca tggagcactt
     1201 ccgtcgagcc ataaacttca agaataagcg taccggtttt ctcctgccag cgattaaaga
     1261 tatcacccgg caaagcctcg ccggcggaga cgcaaacgcg aagcgaagac gcatccgttg
     1321 gatgggagtt catatattcc agctgttgag cgtagagggt cggaatgcca aaaaatacgg
     1381 tgggcttgaa ttgctcgata atttcaaacg tcattttcgg cgatacccgg cggtcggtta
     1441 gcaccgccga acagccaata tagaggggaa aggtcagcac attgccgaag ccgtaagagt
     1501 gaaacatttt gctggccgaa aaacagatat cgtcttcgtt cagaccgatc gtatcgatcg
     1561 ccgcaccttg gccggtat
//
LOCUS       DASCNL010000461         1133 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000966268, whole genome shotgun sequence.
ACCESSION   DASCNL010000461 DASCNL010000000
VERSION     DASCNL010000461.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000966268"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="QF359_06260"
     CDS             <1..327
                     /locus_tag="QF359_06260"
                     /inference="COORDINATES: protein motif:HMM:NF025092.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HJO86547.1"
                     /translation="AANQGEQLNPEFGLKPVVSYAGLPKKFITGEVVVKDGNAEECLA
                     GVSVALKGSDQEYATSTDTFGDFEFNGLAAVGAYTLVISHDGYTSIERTVTTEGDVNL
                     GVIELG"
     gene            complement(625..>1133)
                     /locus_tag="QF359_06265"
     CDS             complement(625..>1133)
                     /locus_tag="QF359_06265"
                     /inference="COORDINATES: protein motif:HMM:NF025850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione S-transferase domain-containing
                     protein"
                     /protein_id="HJO86548.1"
                     /translation="EAGYEGVASLSFVAVFRAKLLAMPEDDLNAYWAGQTVLERTQRQ
                     KSCVYDGYESPYALRAIAIWERIFSKIEEVLADGRPWIMGEQFTLADLNLAPFVARLD
                     GLQLVEPWLQDRPLTQKWWQATQARRSYIEARVGPSAGETETMRIEGAKVFGDFEQKR
                     AEYLAAYG"
BASE COUNT          293 a          282 c          276 g          282 t
ORIGIN      
        1 gcggctaatc agggcgaaca gcttaatcct gagttcggac tcaagccggt agtcagctat
       61 gctggcctgc cgaaaaaatt catcaccggt gaagtggtgg ttaaagatgg caatgcagaa
      121 gaatgtctgg caggtgtgag cgttgcgctc aaaggtagtg accaggagta cgcgacctcc
      181 accgacactt tcggagattt tgagtttaac ggacttgctg ctgttggtgc ctacacactc
      241 gttatcagtc acgacggcta cacatcaatt gaacgaaccg tcaccacgga aggtgatgta
      301 aatcttgggg tgatagagct aggttgatag aaagtcgggg acatctggtg ggcacgattt
      361 atccattgcc gagctctcaa ccacttatcc taaataacta atccttcctt ctggattttt
      421 tatctattta aggcacttac tagtaattta ttattactca ttactatttt agtataattt
      481 ttcttggaga agaaaaatac gagattacgt aaatacgaat actcaatcca acggttgatg
      541 gatgtgcgaa ccgcttacag gaatgccata caagctagcg gatatttaca attctaaaaa
      601 gctggattga gtgatcgagt ttgcctaacc gtacgccgcc agatactcag ctcgtttttg
      661 ctcgaagtcg ccgaagactt tggcgccttc gatccgcatg gtctcggttt cacccgcaga
      721 cggccctacc cgggcttcga tatagctccg ccgtgcttgg gtcgcctgcc accatttttg
      781 cgttaacggg cgatcttgca gccagggctc aaccaattgc agaccatcaa ggcgggcgac
      841 aaagggtgcc aagttcaaat cagccaaagt aaattgctca cccataatcc aaggccggcc
      901 atcggccagc acttcctcaa ttttgctaaa gatccgctcc cagatggcta tagcgcgcag
      961 cgcatagggt gactcgtagc cgtcatagac acaagatttc tggcgctgag tacgctccag
     1021 cacggtctgg cctgcccaat acgcgtttag atcatcttcc ggcatggcca gtaatttggc
     1081 tcgaaaaaca gcaacaaagg acagagaggc gacgccttcg tagccggctt cat
//
LOCUS       DASCNL010000462         1060 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000968888, whole genome shotgun sequence.
ACCESSION   DASCNL010000462 DASCNL010000000
VERSION     DASCNL010000462.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1060)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000968888"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="QF359_06270"
     CDS             <1..429
                     /locus_tag="QF359_06270"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJO86549.1"
                     /translation="GIVQGEAHGFGAALAALTDITICSDQAKFSLPETSHNIMPTMAM
                     SALMGRVSRKALMYMTYTCDVIDADTALSYGLASQVVPHDELDVTVEACIVKLNRIPR
                     SAIKAVKEFSTEAEELTTKSAKAYARNLHATINSSETLRK"
     gene            complement(453..>1060)
                     /locus_tag="QF359_06275"
     CDS             complement(453..>1060)
                     /locus_tag="QF359_06275"
                     /inference="COORDINATES: protein motif:HMM:NF014794.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO86550.1"
                     /translation="ISILDLAQAVRSVMQEDDISLISHTIGWPGDEAYYTHPWGYLGN
                     AGGGGLGAGTGNAIGSALAMRDQGLKYLPLAILGDGDYLMGVNALWAAAHERIPVLIL
                     VANNNSYFNDEMHQEAVAKKRNRPPENRWIGQRIDDPEVDICAIAEAQGLQAEGPVEN
                     REDLIPALKSSIKKVRAGASLVMDVKVTPEYATSPIHERKS"
BASE COUNT          251 a          311 c          265 g          233 t
ORIGIN      
        1 ggcattgtcc agggtgaggc gcatgggttc ggcgccgctc ttgccgctct gaccgatatc
       61 accatctgca gcgaccaggc aaaattctcc ctgccggaaa cctcacataa catcatgccg
      121 accatggcga tgtcagcgct gatgggcaga gttagccgca aagcactaat gtatatgacc
      181 tatacctgcg atgtaatcga cgctgataca gcgctgagtt acgggctcgc cagtcaggtc
      241 gtaccccatg atgaattgga tgtaacggtc gaggcctgta tcgtaaagct caaccgcatc
      301 ccgcgttctg ccattaaagc cgtcaaagag ttctcaactg aggccgaaga gctgacgaca
      361 aaatctgcaa aagcctacgc ccgcaatctt catgcgacga tcaacagttc tgaaactttg
      421 cggaaataat taatttcacg actgtcgtga aattaactct tccgttcatg gatcgggctg
      481 gtggcgtatt ccggggtgac tttgacatcc atcaccagcg aagcgcccgc ccgcactttc
      541 ttaatcgagc ttttcaaagc ggggataagg tcttcgcggt tttcaaccgg gccctccgcc
      601 tgcaggcctt gagcttcggc gatggcgcag atatcaactt ccggatcatc gatacgttgg
      661 ccaatccaac ggttctccgg cggccggttg cgctttttag caaccgcctc ctgatgcatc
      721 tcgtcattga aataggagtt gttgttggcg acgaggatca acaccgggat acgctcatgc
      781 gccgccgccc acaaggcatt cacccccatc agataatcgc catcaccgag tatagccagc
      841 ggcagatatt tcaagccctg atcccgcatc gccaaggctg agccaatagc gttaccggtg
      901 cccgccccca aaccaccgcc accggcatta ccgagatacc cccacggatg agtataatat
      961 gcttcatcac cgggccagcc aatggtgtgg ctgattagcg atatatcatc ctcttgcata
     1021 accgagcgga cagcttgggc gagatcgaga atactgatcg
//
LOCUS       DASCNL010000463         2824 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000969670, whole genome shotgun sequence.
ACCESSION   DASCNL010000463 DASCNL010000000
VERSION     DASCNL010000463.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000969670"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="QF359_06280"
     CDS             <1..270
                     /locus_tag="QF359_06280"
                     /inference="COORDINATES: protein motif:HMM:NF015419.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdenumtransferase MoeA"
                     /protein_id="HJO86551.1"
                     /translation="NKMLGAADTTHVTETAVLGRDLAENDKRQDYIRATLTMGSEGTL
                     TATPFDHQDSSMLARFAEAACLIVRAPFAGPIKAGERVKIIRLGG"
     gene            493..1182
                     /gene="lexA"
                     /locus_tag="QF359_06285"
     CDS             493..1182
                     /gene="lexA"
                     /locus_tag="QF359_06285"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HJO86552.1"
                     /translation="MLTEKQYELLMYIDHSLRETGISPSFDEMKDALDLKSKSGIHRL
                     ITGLEERGFIRRLPHRARALEVIKLPENVQNLTTLTYAENVVKGDFGNGEAHPAGTND
                     TAELPLLGRIAAGTPIEAISDPTLYIDVPPTLVGQGEHYVLEIDGDSMIDAGIYDGDT
                     VVIEKCGTAENGTIVVALVDDSEATLKRIRKKGDTIALEPANKDFETRIFGPDRVKVQ
                     GKLVGLIRSYH"
     gene            1458..>2824
                     /gene="gltX"
                     /locus_tag="QF359_06290"
     CDS             1458..>2824
                     /gene="gltX"
                     /locus_tag="QF359_06290"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HJO86553.1"
                     /translation="MPKVVTRFAPSPTGFLHIGGARTALFNWLYAKYHDGEFLLRIED
                     TDRKRSTDEAVEAIYGGMKWLGLDWDGDVYSQFARRNRHTEIAHQLHTEGKAYHCYCS
                     PEELAEMRETSRAAGSTRLYDGTWRDRDPSEAPAGVDPVIRLKALEEGETIITDAIQG
                     DVTVNNNQIDDMILLRADGTPTYMLAVVVDDHDMGITHVIRGDDHLSNTFRQIQIYNA
                     LDWELPIFAHIPLLHGSDGAKLSKRHGALGVEAYRDMGFLPEAINNYLLRLGWSHGDE
                     EIISQEQAIEWFDLDSVGKSASRFDMDKLSNLNSHYINEADNDRLVELILPEVSKMLD
                     GNVAVEAESRLKLGMDSLKDRAKNIQELAENAVFYATNRPVKITLKAAKHLDQNSLDI
                     LAKVRAELAEIDAWNHETVNQITRDLAENEDVGLGKIAQPLRSALSGSHASPGIFEVM
                     EILGK"
BASE COUNT          760 a          650 c          673 g          741 t
ORIGIN      
        1 aataagatgc tgggcgcagc tgataccacg cacgttaccg aaaccgctgt gctgggcaga
       61 gatttggctg aaaatgataa acgccaggat tatattcgcg ccactcttac gatgggcagt
      121 gaaggtacgc tcaccgcgac tcctttcgac caccaagaca gctccatgct ggcgcgattt
      181 gccgaagctg cgtgtttgat cgtacgtgcc ccctttgcag gcccgataaa agccggtgaa
      241 cgagtcaaaa tcatccggtt aggaggctga tagtcgtttt tttgtcactt cggacaaaaa
      301 ttcgacaatt ttaactattt tgcctcttga ctagaaaaaa gaaccaaact agaacaaata
      361 tagacgtttt ggttttgttc tatatctagt tggtgttgta accaaagctg ctatattgtg
      421 attttgccac tctaatcgca aatattgatt aagttaattt aatgcagagc aaaataaacc
      481 aggagtttag agatgctcac tgaaaaacaa tatgaattgc tcatgtatat cgatcacagt
      541 cttcgtgaaa cagggatctc cccttccttc gatgaaatga aagatgccct tgatttgaaa
      601 tccaaatccg gcatccatcg tcttatcacc ggcttggaag agcgaggatt catccgccgc
      661 ctgcctcatc gcgcccgcgc tttagaagtt ataaagctgc ctgaaaatgt gcaaaatttg
      721 accacactga cgtatgcaga gaatgtcgtt aaaggcgatt ttggtaatgg cgaagctcat
      781 ccggctggca ccaatgatac tgccgaactt cctttattgg gtagaatagc tgctggcacg
      841 cccatcgaag ccatcagtga tccgaccctg tatattgacg taccgcctac tctggtgggc
      901 caaggtgagc actatgttct tgaaattgat ggtgattcca tgattgatgc tggcatttat
      961 gatggtgaca ccgttgtcat tgaaaaatgt ggtacagctg aaaatggcac gattgtcgtc
     1021 gctctggttg acgacagtga agcaacactc aaacgtattc gcaaaaaagg tgacacgata
     1081 gccctggaac cggcgaacaa agattttgaa accagaatat ttgggccgga ccgagttaag
     1141 gtacagggaa aactcgtcgg tttgatccgc tcttatcatt aatcatcttc gattgagcaa
     1201 acctctttta taataccacc tcactagttg gcggctgagc acggatcact tcttcgtcag
     1261 tgtcacagca ccagcctggc tggccaagct acgtgcctcg taattttaac ctcacttttt
     1321 gtggcatttc gtaggacttc aaaaaaggca aacaaatttt ttcgggagtt tgttttcaga
     1381 gtgacagagc cgtaacgagc cgctaaactg tccgccttct ttagatttat ccattacttt
     1441 caataggttg aactgttttg cctaaagtcg tcacccgttt tgcaccttcg ccgacaggtt
     1501 ttcttcatat cgggggtgcg cgtaccgctt tgttcaattg gctctatgct aaataccatg
     1561 atggagaatt tttgctgcgc atcgaagata ccgaccgcaa acgttcaacc gacgaggctg
     1621 tcgaagccat ttacggcggt atgaagtggc tcggcctgga ctgggacggt gacgtctact
     1681 cgcaatttgc acgccgcaac cggcatacag aaattgccca ccaattgcat acagaaggca
     1741 aggcctatca ctgttattgc tcaccggaag aattggccga aatgcgtgag acctcacggg
     1801 cggcgggcag tacgcgtctt tatgacggca cgtggcggga ccgtgatcca tctgaagctc
     1861 ctgccggtgt tgatccggta atccggctga aagccctcga agaaggtgaa accattatta
     1921 cggatgccat tcaaggcgat gtcactgtta ataataatca gattgatgat atgatcctgt
     1981 tacgggccga tggtacgccg acctatatgc ttgcagttgt ggtcgatgat catgatatgg
     2041 ggatcaccca tgtcatccgc ggcgatgatc atttgagcaa caccttccgg caaattcaga
     2101 tctacaacgc ccttgattgg gaattaccaa tttttgctca tataccgctg cttcatggca
     2161 gtgacggtgc caagctttca aaacgtcatg gcgccctcgg cgttgaagct tatcgtgata
     2221 tgggctttct acccgaagca atcaataatt atttattacg cttaggctgg tcccatggcg
     2281 atgaagaaat tatcagccag gagcaagcaa ttgagtggtt tgatctggac tctgtcggca
     2341 aaagcgcctc acgttttgac atggataaac tctcgaattt gaacagtcat tacatcaatg
     2401 aggcggacaa cgaccggttg gtggagttga tcttaccgga agtatcaaaa atgcttgacg
     2461 gcaacgtcgc agttgaagcg gaatcccgtt tgaagctcgg tatggatagc ttaaaagatc
     2521 gcgctaaaaa tatccaagaa ctcgctgaaa acgctgtctt ttatgcgacc aatagaccag
     2581 taaaaatcac cctgaaagca gccaaacacc tggatcaaaa cagtctcgat atactggcaa
     2641 aggtgcgtgc tgaattggcg gaaattgatg cttggaacca cgaaacagtt aaccaaatta
     2701 cccgtgacct ggctgaaaat gaggatgtcg gtttgggtaa aattgcccaa cctttgcgct
     2761 cggctttaag tggctctcac gcatctcccg gcatttttga agtgatggaa atattgggta
     2821 aaga
//
LOCUS       DASCNL010000464         1277 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000971648, whole genome shotgun sequence.
ACCESSION   DASCNL010000464 DASCNL010000000
VERSION     DASCNL010000464.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000971648"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..930
                     /locus_tag="QF359_06295"
     CDS             <1..930
                     /locus_tag="QF359_06295"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HJO86554.1"
                     /translation="LAILKKAGKDSWVMAGGNDSLSWFKDRVKQPKTVVDISGIGELK
                     GIREGANGIEIGALTSLTEIVNNATIKAKFSLLSNATGKVASPQIRNTGTIGGNVSQD
                     ARCWYYRGGLTCYRAGGNTCFADTPTAMNREHTLFNASRCVAVSPSDIAPALVALDAK
                     MVIQNRSGTKVVDAEKFFVGPAVDIINMTILKHGDILTAIRIPNTWANSTFYFEKVAD
                     REVWDFPLVNVAAAMKVSGGTIKEMRIAVGGVEAVPKRLQVVEDLAKGQKKDINFAKL
                     AAKASMRGAKPLNFNHFKIPLMKNLITRTFRDS"
BASE COUNT          342 a          281 c          323 g          331 t
ORIGIN      
        1 ctagcgatac tcaaaaaagc cggtaaagac agttgggtca tggcaggcgg caatgatagc
       61 ctgtcctggt tcaaagatcg ggtgaagcag cctaagacgg ttgtcgatat ttccggtatt
      121 ggcgagctta aaggcattcg tgaaggtgcc aatggaattg aaattggggc tctcacgtca
      181 ctgaccgaga tcgtcaataa tgcgacaata aaagcgaagt tctcactgct ctcaaacgcg
      241 accggtaaag tcgcaagtcc gcaaatccgc aataccggaa ccatcggcgg caacgtatcg
      301 caagatgcgc gttgctggta ttaccggggc ggtctaactt gctaccgggc aggaggtaat
      361 acgtgtttcg ctgacacgcc gacggcgatg aaccgcgaac atacgttgtt taatgccagt
      421 cgttgtgttg ctgtatcacc ttccgacatc gctccggcac tcgttgccct ggatgccaag
      481 atggttattc aaaatcgtag cggcaccaag gttgtcgatg cagagaagtt ctttgtcgga
      541 ccagctgtcg atataataaa tatgaccatc ctgaaacatg gtgatatttt gacagctatc
      601 agaattccca atacctgggc gaattcgacc ttctattttg agaaggtcgc ggatcgcgaa
      661 gtgtgggatt tccccttggt caatgtcgcc gctgcgatga aagtcagtgg tggtacgatt
      721 aaagaaatgc gcattgctgt cggtggtgtt gaggctgtgc cgaaacgact gcaggtggtt
      781 gaagatttag ccaaaggtca gaaaaaagat atcaattttg ctaaattagc agctaaggca
      841 tccatgcgtg gggccaagcc tttaaacttt aatcacttca aaattccact gatgaaaaat
      901 ctcatcactc gaacttttcg ggattcgtga tcagcgtgga attttttcgc attagtaaaa
      961 atgcttgggg ccaggagact ctactcggag tctcctggga ccttatttgg gtgtttatcg
     1021 gcgccgctgt attgtttatc ctcgttcaca tcatttataa atggctattc actccgaaaa
     1081 agagtgaggt ttaacatcaa gccaggaacg agaaggacgt tgccaggacg tgaattccca
     1141 acctattcaa gatactaaag acagtgacaa cattgttatc cgacataaaa ttcctgaccg
     1201 aatttaccat tggataatgg cggcggctgt aatagtgttg ctggccacag cctttttacc
     1261 gattgccggc ttaaaat
//
LOCUS       DASCNL010000465         3429 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000973461, whole genome shotgun sequence.
ACCESSION   DASCNL010000465 DASCNL010000000
VERSION     DASCNL010000465.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3429)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3429)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3429
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000973461"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /locus_tag="QF359_06300"
     CDS             <1..500
                     /locus_tag="QF359_06300"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJO86555.1"
                     /translation="KFNMTFEAPISQWQEPVQEAWVDYNGHMNIAYHTLIFFNAVDQF
                     YEMIGLGQPYKETKRMTTFAVECHVGYQREVKLGDEVKVTIQLLGFDEKRLHYFCTMF
                     HVTEGYQVATQEYLVLHVDLATKKVTSFSADPMEKMAELWEVHKDLPTPPQICGKMKI
                     PSLQK"
     gene            complement(501..1097)
                     /locus_tag="QF359_06305"
     CDS             complement(501..1097)
                     /locus_tag="QF359_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO86556.1"
                     /translation="MTLQSSGPLERRKVVSELLQDRGDLLVVTGLGSPSYDAMAAGDN
                     DANFYLWGGMGSTVTIGLGLSLAQPKRPVLVLTGDGEMLMGLGALATAGAKHPRNLSI
                     AVLDNERYGETGMQLTHTAHGVGLAEVATACNFDSSVVITEMDEIGPFRQQIQSTDAG
                     LRFAQIKIKAENVEKVLPSRDGVHVKNRFRAHLGFSPL"
     gene            complement(1094..1633)
                     /locus_tag="QF359_06310"
     CDS             complement(1094..1633)
                     /locus_tag="QF359_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonopyruvate decarboxylase"
                     /protein_id="HJO86557.1"
                     /translation="MLNKKRPDTLDIWSDQVFDALLAADIKHVAYVPDTGHARLIERA
                     IEEPGMEASVLTTEEEGIGLLLGAWLGGERGVLLMQSSGVGNCINTLSLVQNCRFPFL
                     TLVTMRGEWAEFNGWQTPMAKVTAQAFELMDVLVYRVEQSNEAVETVSAVADTVFNGD
                     FAAAVLFSQRMIGRKEWAK"
     gene            1776..2699
                     /locus_tag="QF359_06315"
     CDS             1776..2699
                     /locus_tag="QF359_06315"
                     /inference="COORDINATES: protein motif:HMM:NF015431.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HJO86558.1"
                     /translation="MNFRQLRTLVHIGELGSLSKAADRLHVAQPALSRQIRALEDEIG
                     TPLFTRHGRGMVLTQTGELLVERANNILRQVEEARADAISSGGWVRGSVVIGMPPTVA
                     DILAGRLAKEFADQHPDVNLRFVSAFTSHLIEGLQKRNIDLAILYDPKSHGSLHIEPL
                     LQEDLFLVAPGKAKLSLKKPVSFKDLSAETLLLPGGQHSIRQLVEYHAREADCELKVT
                     MEADSLSLLKNFVSLELGSTILPLPSVYQNIEEGSLSAAPIIDPSPTRTLVLATATDR
                     AVSNATQRAVEMIKQEVAEMIAKNIWVGLPL"
     gene            2867..>3429
                     /locus_tag="QF359_06320"
     CDS             2867..>3429
                     /locus_tag="QF359_06320"
                     /inference="COORDINATES: protein motif:HMM:NF014215.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HJO86559.1"
                     /translation="MTEERDVMIPMRDGVKVAVDIFRPDAGGKFPALLAMSPYSKGIQ
                     SLPIAIQPDRSPIHHTPTEAGNPVYFAEHGYIHIIADVRGTGQSEGEYLGWMSKQEAE
                     DGHDIIEWAAEQPWCDSNVGMVGISYFGTIQLPVAAEQPPHLKAIMPWNAPADFYRES
                     THHGGILQSFFYYLYVQRICADRSTSVT"
BASE COUNT          879 a          902 c          862 g          786 t
ORIGIN      
        1 gaaagtttaa catgacgttt gaagctccaa tatcgcagtg gcaggaaccc gttcaagagg
       61 cgtgggttga ttataatggc cacatgaata tcgcctatca cacgcttatt ttttttaatg
      121 ccgtagatca attttatgaa atgatcggct tggggcagcc ctataaagaa acaaaaagga
      181 tgaccacctt tgcggttgaa tgccatgtcg gatatcagcg cgaagtaaaa ctaggtgatg
      241 aagttaaagt aacgatccag ttgcttgggt ttgacgaaaa acgattgcac tatttctgca
      301 ccatgttcca cgtgaccgag ggttaccaag tcgcgaccca agaatacctg gtccttcacg
      361 ttgaccttgc caccaagaag gtgacatctt tcagcgcaga tccaatggaa aaaatggctg
      421 agttgtggga ggtgcataaa gacttgccaa ctccaccaca gatttgcggt aagatgaaaa
      481 ttccatcact gcagaaataa ctagagcggc gaaaatccga gatgggcgcg aaaacggttt
      541 ttcacatgca cgccgtcgcg cgagggcaga actttttcca cgttttccgc tttgatctta
      601 atttgggcga aacgtaggcc cgcatcggtc gattgtatct gttgcctgaa aggacctatt
      661 tcgtccatct cggtgatgac gacagaactg tcaaagttac aggccgtggc gacctcggcc
      721 aagccaacgc catgagccgt gtgggtcagt tgcatgccgg tttcgccgta cctttcatta
      781 tccaaaacag cgatgctaag attacgggga tgcttcgccc cggcagtcgc cagagctccc
      841 agtcccatca gcatttcacc atcacccgtg agcaccaaaa cggggcgttt gggttgtgcc
      901 agggataggc caagaccgat ggtaaccgta ctgcccatac cgccccaaag ataaaaatta
      961 gcgtcgttgt cgccagcggc catggcgtcg taactggggg aacctaagcc ggtaaccacc
     1021 agcagatcac cccgatcctg caataattcg gacactactt tccggcgctc cagtggtcca
     1081 gaggattgta acgtcacttc gcccattctt tcctgccgat catccgctgc gagaacagaa
     1141 ccgcggcggc aaaatcaccg ttgaaaaccg tatcggcgac ggctgaaacg gtttccaccg
     1201 cctcgtttga ttgttcgacg cgataaacca aaacgtccat cagctcaaaa gcttgcgccg
     1261 tgaccttggc catcggcgtc tgccagccat taaattcagc ccattcgccg cgcatcgtca
     1321 ccaacgttaa aaacggaaat cggcaattct gaaccagcga tagcgtatta atgcaattgc
     1381 caacgccgct tgattgcatg agcagaactc cgcgctcgcc tccaagccag gcaccgagca
     1441 gcaagccgat gccttcttcc tcagtggtta gaacgctggc ttccatgccg ggctcttcga
     1501 tcgcgcgctc aatcagacgc gcatgtccag tatcgggaac ataggcgaca tgtttgatgt
     1561 ccgcagccag cagagcatca aaaacttgat ctgaccaaat atccaatgtg tcaggccgct
     1621 ttttattcag cataaaagtt aactccaacg gcggtatcta ggccaaacaa tttccaccac
     1681 taataaatct tgcttcggcc tattcttcaa atataattct attaaatgag atatgccaaa
     1741 acggtaaatc aaatacttat tagggagcta aggcgttgaa tttccgtcaa cttcggacgt
     1801 tggtgcatat tggcgagctt ggcagcttga gcaaggcagc agaccggctg catgtggctc
     1861 aaccggcctt aagccggcaa atcagagcgc ttgaagatga aattggcacg ccgctattca
     1921 cccgccatgg ccggggcatg gtgctgaccc aaaccggcga gcttttggtc gagcgggcga
     1981 acaatatcct gcgccaggtg gaggaagccc gggccgatgc tatttcgtcc gggggttggg
     2041 tgcgcggcag tgtggttatc ggcatgccgc cgacggttgc cgatattcta gccggccgct
     2101 tagccaagga gttcgctgat cagcatccgg atgttaatct tcgctttgtt tcggctttca
     2161 ccagccattt gattgaagga ttgcagaaaa gaaacattga tctggcaata ttatatgatc
     2221 cgaaatctca tggcagcctg catattgagc cactgctgca agaagacctt tttctggtcg
     2281 caccgggcaa ggccaaactt tctctcaaaa aaccagtgtc ttttaaagat ctctcagccg
     2341 aaacgctgtt actgccgggc ggtcagcaca gcatacggca gttggtcgaa taccatgcga
     2401 gggaggccga ttgcgagctt aaagtcacca tggaagcaga ctcgctaagc ttgttgaaaa
     2461 atttcgtttc acttgaattg ggcagtacca tcctgccgct cccatcggtg tatcagaata
     2521 ttgaagaggg ttcgctcagc gccgcaccaa tcattgaccc atcgccaacg cgaacacttg
     2581 tgctggcgac ggcaaccgac cgcgcggtct ccaatgcgac ccaacgtgct gtcgaaatga
     2641 ttaagcagga agttgctgaa atgattgcta aaaatatctg ggtcgggctg ccgctttagg
     2701 atggacacca cgacatcgca gcgataacaa aatggcatag ttgattgaaa caaacaacat
     2761 ttgaaggaat agcccgacat cattaatcat agcgggccgg aaaaactgca acggagaata
     2821 aaaccccatg acatcgagtg atccaggctc ggaaaagaag tacataatga cagaagaacg
     2881 cgacgtcatg attccgatgc gcgacggtgt taaagtcgct gtcgatatct tccggccaga
     2941 tgctggtggt aagtttcccg cactgctggc gatgtcgccc tatagcaagg gcatccagtc
     3001 tctaccgatc gccattcaac ccgaccgctc gccaattcac catacgccga cggaagctgg
     3061 taacccggtc tattttgccg agcatggcta catccatatc attgctgatg tccgcggtac
     3121 cggccagtcg gaaggtgaat atctcggctg gatgtcaaaa caagaggccg aggatggtca
     3181 tgacatcatc gaatgggcgg ctgagcagcc ctggtgtgac agcaatgtcg gcatggttgg
     3241 catatcctat tttggcacca tccagctccc cgttgccgct gagcagccgc cgcatcttaa
     3301 agccatcatg ccgtggaatg caccggctga tttttaccgt gaatcgacac atcatggcgg
     3361 tatcctgcag agttttttct attatcttta cgtccagcgg atttgcgccg accgcagtac
     3421 atcggtgac
//
LOCUS       DASCNL010000466         1335 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000978617, whole genome shotgun sequence.
ACCESSION   DASCNL010000466 DASCNL010000000
VERSION     DASCNL010000466.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1335)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1335)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000978617"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="QF359_06325"
     CDS             <1..338
                     /locus_tag="QF359_06325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86560.1"
                     /translation="DAVRRLKHLSDIVIRRYGDQLNLELALRDWGRKDLKIANILRQE
                     DEKRIDYISGLFVEIYGDVKVAEAKAWLLFSLFVGEIIIAAPMKEQSRENMLWTCLNS
                     VFEDMPEET"
     gene            384..>1335
                     /locus_tag="QF359_06330"
     CDS             384..>1335
                     /locus_tag="QF359_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86561.1"
                     /translation="MTATITAADVIQMAQDFGADLAGIASAETLNAFPPDPRWPQTPG
                     RMSPYAKSVIVLLLRVPVASFRTKELEPYQMINMLINRRLDKIARRVSEALEKRGYFG
                     LVMNNNSSDWELKSGTYGNLSLRHLAVEAGLGTLGLGVNFMCTEYGPRVNLSVIVTDA
                     ELDPGEPMTEQLCVGEGCSRCLYACPTDAVLHFHIDKRQCSIKAQTTGFYGVADLFQK
                     FVQADEVGQEEILNSQQLFHYWQGLTRVWGCFGTCPRCTAVCPVGNDYLEYLADPQKE
                     IPETTPERIAKGKSYKEARKVGDEVPGLSDWNIRWVGPDGY"
BASE COUNT          348 a          283 c          361 g          343 t
ORIGIN      
        1 gggatgctgt ccgtcggcta aaacatttgt cagacattgt aatacggcga tatggtgatc
       61 aattgaattt ggaattggcg cttcgggatt gggggcgcaa ggatttgaaa attgcgaata
      121 tattacgcca agaagatgaa aaacggattg attacataag tgggttgttt gttgaaatat
      181 acggcgatgt aaaagtagct gaagccaagg cttggttgct gttttcactc ttcgttggtg
      241 aaatcatcat tgccgctccg atgaaggaac aaagtcggga aaacatgctg tggacttgcc
      301 tcaattctgt atttgaagat atgccggagg aaacttgact ctgtaacata ctcataggta
      361 tggttacaca aaagggaggg aaaatgaccg cgacgattac cgcagctgat gttattcaaa
      421 tggcgcaaga tttcggcgct gatctggctg gtatcgcgag tgcggagaca ttgaacgcat
      481 ttccgcctga tccccgttgg ccccaaaccc ctggtcgaat gtcaccctat gcaaaaagcg
      541 tcattgtttt gttactacgt gtaccggtcg cgagtttccg caccaaagag ctcgaacctt
      601 atcaaatgat caatatgctg attaaccgcc ggctcgataa aatagcacgg cgagtttctg
      661 aggcgctcga aaaacgtggc tattttggtc tggtgatgaa caataactca agcgattggg
      721 aattaaaatc aggcacctat ggtaatctta gcctgcgcca tctggcggtt gaggcaggtt
      781 taggcacatt gggactgggt gttaacttta tgtgcactga gtatggtcca cgggtaaacc
      841 tcagtgtcat cgtcaccgat gctgagctgg atccaggtga gccgatgacc gaacagcttt
      901 gcgtgggcga gggttgttcc cgttgcctgt acgcctgtcc gaccgatgca gttttgcatt
      961 ttcatattga caaacgccaa tgctccatta aggcacaaac gacagggttc tatggcgtcg
     1021 ccgatctctt tcaaaaattt gtccaagctg acgaagttgg ccaggaagaa attctgaatt
     1081 cccaacaact atttcattac tggcaggggt tgacccgggt gtggggctgt tttggcacat
     1141 gcccgcgctg cactgcagtt tgcccggttg gcaatgatta tcttgagtat ttggccgatc
     1201 cacaaaagga aatacctgaa actacgcctg agcgtattgc caaaggaaaa tcctacaaag
     1261 aggcgcgaaa agtgggtgac gaggtgccgg gtttaagcga ttggaacata cgctgggtag
     1321 gaccggacgg ctata
//
LOCUS       DASCNL010000467         1876 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000980609, whole genome shotgun sequence.
ACCESSION   DASCNL010000467 DASCNL010000000
VERSION     DASCNL010000467.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1876)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000980609"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(127..1647)
                     /locus_tag="QF359_06335"
     CDS             complement(127..1647)
                     /locus_tag="QF359_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86562.1"
                     /translation="MIDLGSSYRISLDRSPGAVALVDGELRVTYAAWFDKIRRAAGGL
                     ERSGLNKGDRLVVAMQNRWEMATLHWACQFLGVMITPLNWRVKAGELDYCLENAEATA
                     LVFQDVSEEAVANSKEAGSIQRIGLEAGGNTTATFDDLLVDESFDGEPRAGIEDISVM
                     LYTSGTTGKPKGVPRSHRVERAAAIAHVAQHRGIVGEVMLGTMPFYHTMGVRSILAMQ
                     LLDGCLVCQRKFDPQETIEMIEAEKITSVFLVPTLFHDLLEQPGFDHADTSSAVHLGF
                     AGAPMPDGLLSKIWEKMKPEQLVNHYGSSEIYTFTIEPYAVGKPGSAGKAGLNQRIRV
                     VKLGSEDPEDIADPGKEGQIIANCANDEAFTGYWRRPDADEKAFHDGWYFTGDTGYHD
                     EDGDLFVTGRVDDMMISGGENITPVEIESVISLHPSVGEVAVAGIPDDRWGQKVTAFI
                     VSSGDLTAEELDAHCKDSELADFKRPRDYVFLKQIPKSPVGKILRRLLVSGEFDLA"
BASE COUNT          450 a          551 c          437 g          438 t
ORIGIN      
        1 tagtggattt cggcatccgg agattttccg ccgccttggt aatgctctgc gcgttggcca
       61 cctcgtaaaa gagaatcaac gaattcaaat ccatgttaaa agccatgggc cgatactccg
      121 atgaagttag gcgaggtcaa actcgccgga taccagcaag cgtcttagaa tcttacctac
      181 cggcgactta ggtatctgtt tcaagaatac ataatcgcgc gggcgtttga aatccgccag
      241 ctcggaatct ttacaatgcg catccaattc ttccgctgtt aggtcgccgg aactgacaat
      301 gaaggccgta accttttgtc cccaccgatc atccggaatg cccgccaccg ccacttcgcc
      361 caccgacgga tgcagggaga tcacgctttc gatttcaacc ggcgtaatgt tctctccgcc
      421 gctgatcatc atgtcgtcga cccggcccgt gacaaaaaga tctccgtcct cgtcatggta
      481 tccggtgtcg ccagtaaagt accagccgtc gtgaaaagcc ttttcgtcgg cgtccggccg
      541 ccgccagtaa ccggtaaagg cttcatcatt ggcgcaattg gcaataattt gcccctcttt
      601 gccaggatca gcgatgtctt cgggatcttc gctgcccaat ttaacaacac gaatccgctg
      661 attgaggccg gctttgccgg cagatcccgg tttacctacg gcatagggtt cgatggtaaa
      721 agtgtaaatt tccgacgagc cgtaatggtt gaccagttgc tcgggtttca ttttctccca
      781 gatttttgac aacagcccat ccggcatcgg cgctccggcg aagccgagat gaacagccga
      841 agaagtatcg gcatggtcaa atccgggttg ttccaataaa tcgtgaaaca gggtaggaac
      901 caggaataca gacgtaatct tctcggcttc aatcatctca atcgtctcct ggggatcgaa
      961 ctttctctga caaacgaggc aaccgtccaa aagctgcatg gccaggatcg aacgcacacc
     1021 catggtatga tagaaaggca tggttcccag catcacttcg ccgacaatcc cccggtgttg
     1081 cgcgacatgg gcaatggccg cggccctttc gacccgatga gatctgggaa cacccttggg
     1141 ttttccggtc gtccccgagg tatagagcat caccgaaata tcttcgatac cggcgcgcgg
     1201 ctcaccatca aacgactcgt caaccagcag atcgtcaaaa gtcgccgtgg tattgccacc
     1261 ggcttcaagt ccgatacgct gaattgatcc cgcttctttt gaattggcga cggcttcctc
     1321 cgagacgtcc tgaaacacca gcgcggtcgc ttcggcattc tccaggcaat aatccaattc
     1381 cccggctttc acccgccaat tcagcggcgt aatcatcacg cccaggaact gacaagccca
     1441 atgcagcgtt gccatttccc aacggttctg catggcgacg accagccggt ctcctttatt
     1501 taatcccgat cgctcgagcc cgccggcggc gcgccggatt ttgtcgaacc acgcggcata
     1561 agtcacacgc agctcaccat cgaccaaggc aaccgcgccc gggctgcgat ccaaagagat
     1621 tctatagctg ctacctaaat cgatcatgat acaatttctg ctaacatatt cagtttttga
     1681 tcacctaaaa acaataatcc agctttcaaa attccgccca atgggttttt gtccgcacca
     1741 attatgagtc tataattttg caaccgtcaa aggaaaatta ccgttttcag ccaagccatt
     1801 tgctgagtgg cagcaactct gtgccgcata gaaccgccat attcacgcta cacagagact
     1861 agttcgcatt cgtctg
//
LOCUS       DASCNL010000468         8525 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000984724, whole genome shotgun sequence.
ACCESSION   DASCNL010000468 DASCNL010000000
VERSION     DASCNL010000468.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 8525)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8525)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8525
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000984724"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..124)
                     /locus_tag="QF359_06340"
     CDS             complement(<1..124)
                     /locus_tag="QF359_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HJO86563.1"
                     /translation="MSKIGIIGAGAWGTALAMAAIRAGNEVVIQAHEPEVAEAIN"
     gene            complement(190..1263)
                     /gene="tsaD"
                     /locus_tag="QF359_06345"
     CDS             complement(190..1263)
                     /gene="tsaD"
                     /locus_tag="QF359_06345"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HJO86564.1"
                     /translation="MIVLGIESSCDETAAAIVCDAASPDARILSNIVLSQEDEHRPYG
                     GIVPEIAARSHLEHVDHLIKQALQDAGVKLAQLDGIAATGGPGLIGGVIVGIMSAKAI
                     ASVQNKPFIAVNHLEGHALTARLTENVEFPYLLLLVSGGHCQLLIVEEVDRYIRLGTT
                     IDDALGEAFDKSAKMLGLGYPGGPIVERAAATGDGARFELPRPMLGRKECHFSFSGLK
                     TAIRQQIERFGGEEKMSDQDVADLCASFQSAVGDVLIDRCQNALRQFRERYPNGNTLV
                     VAGGVAANQTLAKRLADLEISENTRLIVPPAQLCTDNAAMIAWAGIERLKAGHSDLLD
                     FKPRPRWPLDPDAPTAIGAGVKA"
     gene            1388..2407
                     /gene="hemC"
                     /locus_tag="QF359_06350"
     CDS             1388..2407
                     /gene="hemC"
                     /locus_tag="QF359_06350"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HJO86565.1"
                     /translation="MAAVDKLRVGTRGSPLALTQTNQVISILKEHHAVLCKNGAVDTI
                     VIKTTGDREQSRLLSEIGGKGLFTKELDEAMLRNEIDIAVHSMKDMPTFMPDGIVLHA
                     ITERIDPRDAFISTKAKTIAELPQGAVVGTASLRRKSQILNMRPDLKVVPFRGNVETR
                     ISKLEAGDVNATLLAFAGLTRLGKQDAVTSLIEIDQVLPAVGQGVLAATCREEDLRAN
                     AMIASLSHPPTTVAVLAERAMLAVLDGSCQTPIAGLAHLDGTGKLDLRGIIARPDGVE
                     KAEVELSGLASEAELLGTQVAEKLLIEAGPSILDAIKASGPDIIHPHPEMEHPENMKE
                     NQQED"
     gene            2417..4306
                     /locus_tag="QF359_06355"
     CDS             2417..4306
                     /locus_tag="QF359_06355"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HJO86566.1"
                     /translation="MRVLVTRPGDDGTTLPELLGARGVGSVVEPLLAIKQIEGPPLEL
                     DGVQAFLLTSANGVRALARRTDRREIPVYAVGDATAATARGSGFTQVHSAAANVETLA
                     ELVKEILKPADGPLLHVAGSTVAGDLIGLLEDAGFKCTREVIYDVINKRSLTSSTIAA
                     IKENHIEAVTLYSPRSAEIFVELIRKARLIRSCRSMIAICLSQAVADKISELHWQDIH
                     IAVEPNQDALLDLVAELNNADDQSVGTQKISQHTAEPEILEDLPTSSGPTNAHRVAPI
                     QRRQGGSGQTVFITLLVVATVAGAAIATKPLWLPKVQTSAPMLFAETETEVKITKLRG
                     RLKVLEDSQQVPDLDALQQERKRMQTHLDATLKRLEKLENSIGSVKKLIDAVNTDPGT
                     GAVKMLKQLSNRLDKLEKENLNYRTVYQTEDGKTLNSLTNQVAELEKKLPRATSETQS
                     SEARVLVLSIGQLREAVRAGRSFKDELATLNILVQKNADLQKVLGNALKQLSGIAASG
                     APNLQILQSEFDAQAGNIVQAGLVPDEGSWVQRTIARLTESVKWRRTDNLAGDGVEAI
                     VARAEQALKSRDVEKAIKELSALQEKPAALTKDWLTGAKAYHISEKALAELQTRAVAQ
                     MAAGQ"
     gene            4313..5797
                     /locus_tag="QF359_06360"
     CDS             4313..5797
                     /locus_tag="QF359_06360"
                     /inference="COORDINATES: protein motif:HMM:NF018875.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HJO86567.1"
                     /translation="MIKVVWFLIFLALVSLGAAVVADNPGAVSLRWLGYKVDTSIGVL
                     FAGVFLISISLAIIFRVWFFFRNAPRRIGKVHRDWRRERGYKALTQGMVAVAAGDAQE
                     ARRQARKAENLLADPPLTMLLSAQAAQLSGDEKAAGKFFEKMAERKDTKYLGIHGMLN
                     QAIQEGDKEVALDLAEQAIDLKPKTDNVSRALFDLQVQSGNLEEAEETIRKAVKDKLI
                     NNDTGRRRRAVILYQRSVEAESDGKLSDALNFARKANNLLPGFVPAAVRTSRLLQQAG
                     KRRKAASVIEEIWVTNPHPQLAEVMAELSSGGGEQEKMRTIEKLANYNKDHVESHVAI
                     AKAALVAGMWQEAREHLEAVANSDSTEIPSARICRYMAELEESENSDNEASREWLKKA
                     AIAEPDSAWNCNSCGQIMAEWEPVCNHCESFDTLEWRTPPRVTRLAPVDLPDQAADNK
                     SGETIDMEPNLGNDASARSSDETAKNSDDGQSKTLNVGFSKDEK"
     gene            6158..7174
                     /locus_tag="QF359_06365"
     CDS             6158..7174
                     /locus_tag="QF359_06365"
                     /inference="COORDINATES: protein motif:HMM:NF012449.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HJO86568.1"
                     /translation="MNNDLLVTLGPTSMNKDTVTSCAELGVYLFRINLSHTPIDQVEE
                     TIKRIRLWTDRPVCLDSEGAQLRNGAMKDEVTEFIKGEEIRIELDSVIGNSQRLSFNP
                     ASVCRQFEVGDKIQVDFNHVQFEVTEKFSDHYSAIVLNGGFIGSNKAVDVNRELVFDS
                     LTKKDRQAIEIGNRNNVNHFALSFANLPENVDTMRELCGGGAKIICKIESTSGVNNLE
                     SIIQRADEILIDRGDLSRCVPIERIPFLQRRIISTARLMDTPVFVATNLLESMVTTQS
                     PTRAEVNDVVSTLEMGANGLVLAAETAIGKYPVEAVQMIRSLINETKRWTPNTSIADL
                     MRTQ"
     gene            complement(8097..>8525)
                     /locus_tag="QF359_06370"
     CDS             complement(8097..>8525)
                     /locus_tag="QF359_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HJO86569.1"
                     /translation="RMKAGAERDLWDNYAKRLNWSLTLKEVEEKKPLKPTQLKIKEAE
                     LLLSAVPKGAFLVAMDRSGHALASEDLAKKLSALQDDGISEIAFVIGGSDGLDKSILV
                     RAQLKIALGAMTWPHMLARVMLIEQVYRAQCILSNHPYHK"
BASE COUNT         2303 a         1947 c         2170 g         2105 t
ORIGIN      
        1 ggttgatggc ttccgcaact tccggctcat gggcttggat gacaacttcg ttgccagccc
       61 tgatggcggc cattgccagg gcagtacccc aggcgcccgc gccgatgata ccaatcttac
      121 tcatgaatta tttatgccgt tctaatttat ttaacgcaag acactctaat cttaccatca
      181 catttttgcc taggctttta cgccagcgcc tattgccgtc ggtgcgtcag ggtcaagcgg
      241 ccaacgtggc cggggtttaa aatcgagcag atcggaatgt cctgctttca ggcgttcgat
      301 cccggcccag gcaatcatcg ctgcattgtc ggtgcagagt tgtgctggag gcacaataag
      361 tctggtattc tccgagattt ctaaatcggc gaggcgttta gccaaagttt gattagcagc
      421 aacaccaccg gcgacaacca gcgtattgcc gtttggatag cgctcgcgaa actgtcttag
      481 cgcattttgg cagcggtcaa tgaggacatc gccgacggcg ctttgaaacg acgcacataa
      541 atcggcaaca tcctgatcgc tcattttttc ctcacccccg aaacgctcaa tttgctggcg
      601 aattgcagtt ttgagcccgg aaaaagaaaa atgacactcc ttgcggccca gcatcggtcg
      661 cggcaactcg aatcgcgcgc catcaccggt agctgccgcg cgctcgacaa taggacctcc
      721 gggatagcca agccccaaca tcttggcgga tttatcaaaa gcttcgccta aggcatcatc
      781 tatcgtagtg ccaagtcgta tataacggtc aacttcttcg acaatcaaga gttggcaatg
      841 gccgccggag accaataaca acaaataagg aaattcgaca ttttcggtca gccgggcagt
      901 taaggcatgt ccttccagat gattaaccgc aataaagggt ttgttctgta cgctagcaat
      961 agccttggcc gacataatgc cgacgataac gccgccgatc agccccggac cgccggtggc
     1021 ggctatgcca tcaagttgcg ctaacttaac accggcgtct tgtaaggctt gtttgataag
     1081 atgatcgaca tgttcaaggt gtgagcgagc agcaatttcg ggcacgatac cgccgtaagg
     1141 gcggtgttca tcctcttggc tgaggacaat attacttaag attcgcgcat ccgggcttgc
     1201 cgcatcacac acgatcgcgg cggcggtttc atcacagctt gattcaatac ccaaaacgat
     1261 cataccgact tgcactcaaa aacataattc ttacccaaaa tagagttatt tcgggtttca
     1321 tcgccggact ttactcttta tgttttgaca aaaccacaac cagtatcaaa gatagaaaaa
     1381 attgaccatg gcagctgtcg ataaacttcg tgtcggtacc cgaggtagcc ccctggcgct
     1441 gacccagacc aatcaagtca ttagcatatt aaaagagcac cacgctgttt tgtgcaaaaa
     1501 cggcgcagtt gatacgattg taatcaagac cacgggcgac cgggaacaaa gccggttact
     1561 atccgagatt ggcggtaaag gcttgtttac caaagaactt gatgaagcga tgctgcgtaa
     1621 cgagatcgat attgccgtcc attccatgaa agacatgccg acttttatgc cggatggaat
     1681 tgtgctgcac gcgattactg agcggattga tccccgagat gcgtttatat ccactaaagc
     1741 caagacgata gcagaattac cgcaaggggc ggtcgtcggc accgcctcgc tccggcggaa
     1801 atctcaaatc cttaatatgc ggcctgatct taaagtggtg ccgtttcgcg gtaatgtcga
     1861 aacgcgcatc agtaaacttg aggcgggcga cgtcaatgct acgttgttag cctttgccgg
     1921 attaacccgg ctgggtaagc aagacgctgt aaccagcttg attgaaatag atcaagtgct
     1981 ccccgccgtt ggccaaggtg tcttagccgc aacctgccgg gaagaagatt tgcgcgctaa
     2041 tgcaatgatt gcatcgctct cccatccgcc gacgacggtt gcagtgttgg cagaacgcgc
     2101 catgttggcg gttttggatg ggtcgtgcca aacgccgatt gcgggattgg cgcatttgga
     2161 tgggactggt aaattagact tgcgtggtat aatcgcccgg cccgatggcg ttgaaaaagc
     2221 cgaagttgaa ttgagtggct tggcatcgga ggcagaattg ttaggtactc aggttgctga
     2281 aaaattatta attgaggccg gtccgtcaat cttagacgcg ataaaagcga gcggacctga
     2341 tataattcac ccgcatcctg aaatggagca cccagaaaat atgaaggaaa accagcagga
     2401 ggattaaaac ggtatcatgc gtgtattggt aacccgacct ggcgatgatg gcacaacttt
     2461 acccgaactt cttggtgcgc gtggtgtggg atccgtcgtt gagccgcttt tggcaatcaa
     2521 acaaatcgaa ggcccgccgc tagagcttga tggtgttcaa gcttttctgt tgaccagtgc
     2581 caatggagta cgtgcgctgg cacggcgaac agaccggcgg gaaatcccgg tttatgcggt
     2641 tggtgatgca acagcggcaa cagcccgcgg gtccggcttt actcaggtgc atagcgctgc
     2701 tgctaatgtt gaaaccttgg cggaattagt taaagaaata ctcaaacctg ccgatggacc
     2761 tttgttgcat gttgccggct caactgttgc cggtgatctt attgggttgt tagaagacgc
     2821 tggctttaaa tgcacccgcg aagttattta cgatgtaatc aataaacgca gtctgacgtc
     2881 ctcgaccatc gccgcgatta aagaaaatca tattgaagcg gtaacacttt attcaccgcg
     2941 gtcagcagaa atatttgtcg agcttattcg caaagcgcgc ctcatcagat cgtgccggag
     3001 tatgattgca atttgtctta gccaagcggt cgctgataaa attagcgagt tacactggca
     3061 ggatattcat attgcggtag agccaaatca ggacgccttg ctggatttgg tagcagaact
     3121 aaataacgcc gatgatcaat cggtgggtac ccaaaaaatt tcacagcata cggcagaacc
     3181 agaaatatta gaagatctac caacgtcctc gggaccaact aacgcccacc gcgtcgcgcc
     3241 gatacagcgt cgtcagggcg gctctggtca aactgtcttt ataacgttgc tggttgttgc
     3301 cactgtcgcc ggtgcggcga ttgcaaccaa acccttgtgg ttgccaaaag tgcagacgag
     3361 tgcaccgatg ctgtttgccg aaactgaaac cgaggtgaaa atcaccaaac taagagggcg
     3421 tttgaaggtg cttgaagaca gccagcaagt gccggaccta gatgctcttc agcaagaaag
     3481 aaaacgcatg caaactcatt tggatgcaac cttgaagcgc ttggagaaac ttgaaaattc
     3541 cattggctct gtcaagaaat taattgatgc agtaaatact gatcctggta ccggtgcggt
     3601 caaaatgtta aaacaattgt ctaatcggtt ggataaatta gaaaaagaaa atttaaatta
     3661 ccgcacggtc tatcaaaccg aggatggtaa aacccttaat agtctgacta atcaggtagc
     3721 tgagctggaa aagaaattac cccgggctac aagtgaaacc caaagcagtg aggcacgggt
     3781 cctggtgcta tcaattggcc aattgcgtga agccgttcgc gcaggccgga gtttcaaaga
     3841 tgaattggcg acgctgaata tattggttca gaaaaatgca gatctacaaa aagttcttgg
     3901 taatgcatta aaacagctta gcggcattgc tgctagcggt gcacctaact tgcagatatt
     3961 acagagcgaa tttgatgccc aagctggtaa tatcgtacaa gcgggtttgg tgcctgatga
     4021 aggcagctgg gtgcaacgaa cgatcgcgcg gctgaccgaa tcggtaaaat ggcggcggac
     4081 cgataatctt gccggagatg gtgttgaagc tattgttgcg cgagctgagc aggcactaaa
     4141 atcccgcgat gttgaaaagg cgatcaagga attatccgcg cttcaggaaa aaccggctgc
     4201 tctgaccaaa gactggctga ccggagccaa agcctaccac atttctgaaa aagccttggc
     4261 cgaattgcaa acccgggccg ttgcccaaat ggcggcgggg caatagatat cgatgattaa
     4321 agtggtctgg ttcctcatct ttctggcgct ggttagtttg ggcgcggccg tggtggcgga
     4381 caatccaggt gcggtttcac tgcgctggct tggttataaa gtcgacactt caatcggtgt
     4441 gttgtttgcc ggggtctttc taatttcgat cagtttggcg attattttcc gtgtttggtt
     4501 ctttttccgc aatgctccta gacgaattgg aaaagtgcac cgggattggc gccgtgaacg
     4561 tggctataaa gcgttaactc aaggcatggt cgcggttgcc gctggtgatg cacaggaggc
     4621 ccggcgtcaa gctcgtaaag cggaaaattt gttggccgac ccgccgctca ccatgctgct
     4681 gtcagcgcag gcagcgcaat tatccggcga tgaaaaagcc gccggcaaat ttttcgaaaa
     4741 aatggcagag cgtaaagaca ccaaatacct cggcattcac ggcatgctca atcaggccat
     4801 tcaggaaggc gataaagaag tcgcccttga tctcgccgag caagcgattg atttaaaacc
     4861 caaaacagac aatgtctcgc gcgctttgtt cgatttgcag gttcaaagtg gcaatcttga
     4921 agaagcggaa gaaaccatcc gtaaagccgt caaagacaaa cttatcaaca atgacaccgg
     4981 tcgtcgccgc cgcgcggtta tattgtatca acgtagcgta gaagcggaga gtgacggcaa
     5041 gcttagcgac gcgctcaact ttgcccgcaa agccaataat ttgctgcccg gttttgtgcc
     5101 ggcggcagtg cgcacttcgc gcctcctgca gcaggcaggc aaacgccgta aagcggcttc
     5161 ggtgatcgag gagatttggg tgaccaaccc gcatcctcaa ttggccgagg tgatggccga
     5221 gctgtcatcg ggtggcggcg agcaggaaaa aatgcgcacc atcgaaaaac ttgcgaacta
     5281 taacaaagat catgttgaaa gccatgttgc gattgccaag gctgcgctgg tagccgggat
     5341 gtggcaggaa gcgcgcgaac atcttgaagc ggtcgccaat tcagactcca ccgagatccc
     5401 gtcggcgcgg atttgccgtt atatggctga attagaagag agtgaaaatt cggataatga
     5461 ggcgtcgcgt gagtggttga agaaagcagc gattgccgaa ccggattcgg cctggaactg
     5521 caacagttgc ggtcagataa tggccgagtg ggaaccggtt tgtaatcact gtgaatcctt
     5581 tgacaccttg gaatggcgca caccgcctcg agttacgcgt ttggcaccgg tcgatttgcc
     5641 ggaccaggca gctgataata aatcaggtga gaccatcgat atggagccga atttaggtaa
     5701 tgatgcaagc gccaggtcca gtgatgaaac agccaagaac tctgacgacg gacagtcaaa
     5761 aacattaaat gtaggatttt ctaaagacga aaagtgaatt attattctgt ttttttcaaa
     5821 cacggcgaaa tgaaattaac gcaaaaaatt tttcttgttt catgttgatt tgtatacata
     5881 gaacgagttc attgttgctt ataacagcgt ttctacaacg aattctatgg aaactttagc
     5941 ccgctaaaat ataagttgga ttgagctaga caagtgtaga acgaagatag aggattaaat
     6001 aaaaaatgct tgaagctggg cgcttactca cccataaatc cgtaccttga aatggcatac
     6061 cagatgaacc agactgtccc ctaaatcggc tgtaagtttg ttttaggtat tctgatgatg
     6121 gaccttttca aattagaaat tcctttggga gatatatttg aataacgatc tactagtgac
     6181 ccttgggcca acttcgatga ataaggatac agtaacatcc tgcgctgaat tgggtgtcta
     6241 cttgttccgt atcaatttat ctcatacgcc gatagatcaa gttgaagaaa ccattaaacg
     6301 tattcggtta tggacagatc ggccagtttg cttggatagt gaaggcgctc aacttagaaa
     6361 cggcgctatg aaagatgaag taactgagtt tataaagggc gaagaaatta ggatagaatt
     6421 ggactctgta atcggtaact cgcaaaggtt atcctttaat ccagccagtg tttgcaggca
     6481 atttgaagtt ggcgataaaa tccaagttga ttttaaccac gtccagtttg aagtaactga
     6541 aaaatttagt gaccactatt ctgcgattgt tttaaacgga ggatttatcg gtagcaataa
     6601 ggccgttgat gtaaatcgtg aactggtgtt tgactcgctg acgaagaaag atcgacaagc
     6661 aattgaaatt ggcaatcgga acaatgtaaa tcattttgct ctgtcgttcg ccaacttgcc
     6721 agaaaatgtg gatacgatgc gggagctctg tggaggtggt gcaaaaatta tctgcaaaat
     6781 agaatctaca tcaggagtga acaatctaga aagtataatc cagcgggcag acgaaattct
     6841 cattgaccga ggagatcttt cgcgttgcgt gccgattgag cgaattccct ttttgcagcg
     6901 acgtatcata tcgacggcgc gtttaatgga tacacccgtg tttgttgcca ccaatctgtt
     6961 ggaatcgatg gtaacaaccc aatcaccaac cagggccgag gtaaatgacg tggtcagcac
     7021 tttagaaatg ggggcaaatg gtcttgtcct tgctgcagaa acagcgattg gtaaatatcc
     7081 tgttgaagcc gtgcagatga ttcgatctct tattaatgaa accaaacgct ggactcccaa
     7141 tacaagcatc gccgatctca tgagaactca ataattgcct actaaaacgc cttacacatt
     7201 ttggcatatg gacctggcgt cgagcgggaa atcaacgata gttgaacact ttgtgagtat
     7261 gttaaaggaa agtaatattt ctattcttca ctatgatgac gataaagtaa gggatatttt
     7321 ttgcaaggat tttggttttc cgaaggtatt cgtgggtggg tcgtagaaac attggcacat
     7381 ctcgcgcgca aagcaaatga tgtaggcgtc gattctgtga tgttcgcttt aactgctcat
     7441 caatcggccc acgacttcaa aaatgttatg ttctaaacct gtttattagc tcggtatttt
     7501 agaagtttgc gcctgacaaa tttacgtttg aaaagtttgt accgtttaat attgcgtttc
     7561 ggaaatcaac ctctaataaa ctactatcat cgaacctggc tcctgaatac atattaagga
     7621 gcatttctat atcgtgaaca ttcttgataa cgagtttgta aaagtgtatc tcactaacag
     7681 tgccgcttta gctcagttgg tagagcatcg cattcgtaat tttaaattgc gtcctcatgg
     7741 ggaaaccttt gagtaaaaac tcatcaaagt cggggaaacc tgtaaaatgg caatcccgag
     7801 ccaagtcccc aaaagggaaa ggtgtagaga cttgacggtg agcatctaag tcaatttcgg
     7861 ttgttatgat gaagggaaag tccagcgcac aaacatccac ttggatggca acgaaagttg
     7921 tagttgtgat gaatgcgggg gtcgggtgtt caagtcaccc aagcggcacc atttctttca
     7981 atgacttagc ggagttggta gcgtctgcta tacccccgaa aatagacaac agcgacttct
     8041 atgcagttgg tgtaatttgg gtgtagagaa aacaaatcat gattttccac acccacctac
     8101 ttatgatacg ggtgattact caaaatacac tgggcgcggt agacttgctc gatcagcatg
     8161 actcgggcga gcatatgggg ccaggtcatc gcccccaagg caattttgag ctgagcgcgg
     8221 actaaaatgg atttatccag cccgtctgag ccaccaataa caaaagcgat ctcactgatg
     8281 ccgtcatcct gcaaggcgct cagttttttg gccaggtctt cgctggcaag tgcgtggccg
     8341 ctccggtcca tcgccaccag gaaggcaccc ttcggcacgg cgcttaataa cagttctgct
     8401 tccttgattt tcaactgggt gggtttgagt ggtttctttt cttcgacttc cttgagggtc
     8461 aaggaccagt tgagccgctt ggcataatta tcccacaggt cccgctccgc tcccgccttc
     8521 atgcg
//
LOCUS       DASCNL010000469         1742 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000987017, whole genome shotgun sequence.
ACCESSION   DASCNL010000469 DASCNL010000000
VERSION     DASCNL010000469.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000987017"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="QF359_06375"
     CDS             complement(<1..285)
                     /locus_tag="QF359_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86570.1"
                     /translation="MFELWLNRIRRGFNRSPQELRRRLAQEGRALLDRVRVSPTFGID
                     DDRFAGQFGAPTIEDLWLQLSERPYPTVTDQVDPVELDAIIPQESQRIFTA"
     gene            complement(364..729)
                     /locus_tag="QF359_06380"
     CDS             complement(364..729)
                     /locus_tag="QF359_06380"
                     /inference="COORDINATES: protein motif:HMM:NF024634.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HJO86571.1"
                     /translation="MSDYNQAYMVANPLAPCTVVEINPDNCTGCRLCIEVCRTDVLVP
                     HPEARKVPIVLFPDECWFCGDCVAYCPEPDTIKMHVPITEKVGWKDKESGERFRLGMK
                     NPPPPYTEPPVGWKNIREK"
     gene            complement(726..>1742)
                     /locus_tag="QF359_06385"
     CDS             complement(726..>1742)
                     /locus_tag="QF359_06385"
                     /inference="COORDINATES: protein motif:HMM:NF014907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86572.1"
                     /translation="PPPHPYETQGPTLTHDLAERIESGEFVLPFYADLPGMPELERKA
                     IFGLMIGNEGKTRHGVYEPYADGGYDPNKHMMQANVLPPEEAGIFKPWWNGQGPPQWR
                     ETAFGGGGGLVYDWDCRSTLEGLYTAGTQMLGGGNHSQSASTGRYAGRKAADFALNTD
                     QVEIDQDQLSQERERVYAPVKRSAGIGWKEFQAGLCRVMQDYCATYKAEETLKIGLEW
                     LVSIKESEGQEVFARNPHELARVMEAFSRLTVGQMIMESSRARKASSRACDFERVDYP
                     EVDPPEWDKYVIIKREEDGITISDMPCDYWLQEPYASSYAENYDAHNGLDENTMRETM
                     EAAE"
BASE COUNT          388 a          486 c          429 g          439 t
ORIGIN      
        1 agctgtaaat atacgttgcg attcttgagg gataattgcg tccaactcta ccggatcgac
       61 ttgatccgta accgttggat aggggcgttc cgacaattgc agccaaagat cctcaattgt
      121 cggagcacca aactgaccag caaaacggtc gtcatcgatg ccaaatgtcg gcgacacgcg
      181 aacacgatca agcagcgccc gtccctcttg ggcgagccgg cgtcgtaatt cctgcggtga
      241 gcggttaaat ccgcgtcgta tccggttgag ccagagctca aacatagatt acccctttgc
      301 caatagtccc tctttcataa tatgtacggg cctataaaca aaagataaat gcgcgaatag
      361 taattatttt tcccggatat ttttccagcc aaccggcggt tcggtatagg gcggtggtgg
      421 atttttcatt cccaggcgaa agcgttcgcc gctttcttta tctttccagc ctactttttc
      481 ggtaattggc acgtgcattt tgatcgtatc cggttctgga caataggcta cacaatcgcc
      541 gcagaaccag cattcatctg gaaaaaggac aataggcact ttacgcgctt ccgggtgcgg
      601 caccaaaacg tcggtgcggc agacttcgat gcataagcgg cagccggtgc agttatcagg
      661 attaatttcg acaacagtac aaggcgccaa tgggttggcg accatatagg cttgattgta
      721 atcactcatt ctgctgcctc catggtttcg cgcattgtgt tctcatcgag cccgttatgc
      781 gcatcgtaat tttctgcata gcttgatgca tatggttcct ggagccaata gtcgcagggc
      841 atgtcagaaa tggtgatacc atcttcctcg cgtttgatga taacatattt atcccattcg
      901 ggaggatcga cttcaggata atcaacccgt tcaaaatcgc acgcccgcga actggccttg
      961 cgcgcccggg acgattccat aatcatctgg ccgacggtta gccgtgagaa cgcctccatt
     1021 acccgggcca gctcatgcgg attgcgggca aaaacttcct ggccttcgct ctccttaatg
     1081 ctcacgagcc actctaagcc aattttcagg gtttcttccg ctttataggt cgcacagtaa
     1141 tcctgcatca ctcgacacag tccggcctgg aattctttcc agccgattcc agccgaccgt
     1201 ttaaccggcg cataaacccg ttcacgttcc tggctaagct ggtcttgatc gatttccact
     1261 tgatcggtgt tcaatgcgaa gtctgcggct ttgcgtccgg cataacggcc cgttgacgct
     1321 gattgggaat ggttgccacc gcccagcatc tgggtgccag cagtgtacaa tccttcaagc
     1381 gtcgagcggc aatcccagtc atagaccaat ccgcctccgc caccaaaggc cgtttcccgc
     1441 cattgcggcg gcccctgtcc gttccaccag ggtttaaata tgccggcttc ttccggcggc
     1501 aaaacattgg cctgcatcat atgtttattt ggatcatacc caccatcggc ataaggttcg
     1561 tagacaccgt gacgggtctt gccttcattg ccaatcatca gaccaaagat tgctttacgt
     1621 tcgagttccg gcatacccgg cagatcagcg tagaacggca gcacgaactc accgctttct
     1681 atccgctccg ccagatcatg cgtgagggtg ggcccttggg tctcgtaggg atgcgggggt
     1741 gg
//
LOCUS       DASCNL010000470         1189 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000989924, whole genome shotgun sequence.
ACCESSION   DASCNL010000470 DASCNL010000000
VERSION     DASCNL010000470.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1189)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1189)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000989924"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(110..520)
                     /gene="acpS"
                     /locus_tag="QF359_06390"
     CDS             complement(110..520)
                     /gene="acpS"
                     /locus_tag="QF359_06390"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HJO86573.1"
                     /translation="MIIGIGNDLIDITRIERTLERFGDRFIQRIFTDVEQAKSEKRRM
                     RAASYAKRYAAKEACSKALGTGFRQGVFWRDMGVINLPSGKPTMQLTGGALKRLQEII
                     PEGMEAQINLTITDEPPTAEAFVIISAVPVQTSD"
     gene            complement(535..>1189)
                     /locus_tag="QF359_06395"
     CDS             complement(535..>1189)
                     /locus_tag="QF359_06395"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HJO86574.1"
                     /translation="ASKAGADGITAHLREDRRHMTDQDIERLRGEIDLPLNLEMAATD
                     EMLVIALRHLPHATCIVPEKREERTTEGGLDAAGGHNHLVPIVDSMQANSIRVSLFIE
                     ADKRQLDAAISMGAPVVELHVGAYCDAVGDVRDAELKRIQEAAAYGAEIGLEVHAGHG
                     LGFDTVGAIAEIPQLVELNIGHFLIGEAIFGGLDNSIKRMRSLMDKARSKVSGERSA"
BASE COUNT          269 a          337 c          288 g          295 t
ORIGIN      
        1 ctatatggga tatagcgtgt ctatttcatt tatccagcta tcgatttgat tgctccagga
       61 aaaattaagc aggaacgttg ctgccttatc gccgcgccgt tttccgccat tagtcgctgg
      121 tctgcaccgg cactgctgaa ataatcacaa aggcctcggc ggttggcggt tcatcggtga
      181 tagtaaggtt gatctgcgcc tccatgcctt ccgggataat ctcctgcaac cgtttaagcg
      241 cgccaccggt taactgcatg gtcggtttgc cagacggcag attgattacc cccatgtctc
      301 gccagaaaac accttgtcga aaaccggtgc cgagcgcctt ggaacacgct tctttggcag
      361 catagcgttt ggcatagctg gcagcccgca tccggcgttt ctccgatttt gcctgctcaa
      421 catcggtaaa aatgcgttga atgaagcggt cgccaaagcg ctccagcgtt ctttctattc
      481 gcgtgatgtc gataaggtca ttgccgatgc cgatgatcac tagggacctc actgttacgc
      541 tgagcgctcg ccggaaactt tggagcgagc tttatccatt aaggagcgca tgcgtttaat
      601 cgagttatcc aagccgccaa atattgcttc accaattaga aaatgcccaa tattgagctc
      661 aaccaattgc ggtatctcgg cgatggcacc aacggtatca aagccaagcc cgtgaccggc
      721 atgaacttca aggccgatct cggcaccata ggccgctgct tcctggatgc gctttaattc
      781 agcatcacgg acatcaccga cggcatcgca ataagccccc acatgcagct caacaaccgg
      841 tgcacccatc gatatggcgg cgtccaattg tcttttatcg gcttcaatga aaagcgaaac
      901 gcggatactg ttcgcctgca tagaatcaac gattggcacc agatgattat gcccgcctgc
      961 cgcgtccaat ccgccctcag tggttctttc ctcacgcttt tccggcacaa tacaggttgc
     1021 gtgtgggaga tgcctaagcg caattactag catttcatca gtcgccgcca tttccaaatt
     1081 aagcggcaga tcgatctcac cccggagacg ttcaatgtct tgatccgtca tgtggcggcg
     1141 gtcttcgcgt aaatgggcgg taatgccatc agctccagct ttgctcgcc
//
LOCUS       DASCNL010000471         2179 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000990879, whole genome shotgun sequence.
ACCESSION   DASCNL010000471 DASCNL010000000
VERSION     DASCNL010000471.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000990879"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            328..1716
                     /gene="cysS"
                     /locus_tag="QF359_06400"
     CDS             328..1716
                     /gene="cysS"
                     /locus_tag="QF359_06400"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HJO86575.1"
                     /translation="MSLQLYNTVAREKQEFTSLQEDSVGMYVCGPTVYDYAHIGNARP
                     VIVFDVLFRLLKTIYGEECVTYVRNITDVDDKIIAAHQESGEDIASITSRTTDAFHSD
                     MAALGNLEPTIEPRATDHIPQMISMIEKLIASGHAYEEQNHVCFNVPSMPDYGRLARL
                     NRDELIAGARVDIAPYKKDAADFILWKPSDEDQPGWDSPWGWGRPGWHIECSAMSSEY
                     LGKTFDIHGGGQDLIFPHHENEIAQSCCAFGEGTFAQIWMHNGYLMVEGEKMSKSLGN
                     FITVHNLLKEHHGEAVRLCMLMTHYRQPLNWTADGLAQAKSNLDSFYGALRATVEIVP
                     ATVAPADNFVSALADDLNSPQAIAVLHELVGELNKAGNDKAKATAKNNLLAAGNLMGL
                     LQLDPEDWFKWTPAGASDGLSDADIDALIEQRREARANKDFATSDQIRDDLAAQGIVL
                     EDSANSTIWKRG"
     gene            complement(1713..>2179)
                     /locus_tag="QF359_06405"
     CDS             complement(1713..>2179)
                     /locus_tag="QF359_06405"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO86576.1"
                     /translation="KEGLAALTSAAGIGALIFASVLAFRGKTKGLTTFLVIGQSGSAL
                     FLIAFALTENFFVGLATLALVGGLLVFAATSAQSLIQHSVDDDYRARVISINVSLVLG
                     APAISALIIGWLAEFIGLQWAIVWPAIVSLAIFLPVGLLLRRRRRKIEAEKV"
BASE COUNT          562 a          572 c          566 g          479 t
ORIGIN      
        1 gtcatgagta tgaggtgaga aataactgcc cggcacatgc gtatcaccga ggtcgcccgg
       61 cccgattccg ttttttcccg ctccagcatc cgccgctcaa cgcctgtcat tcgcggtggc
      121 acccaatcaa gcattaccgt ttagatcacc acgcattcag taaatccatg tataaatttt
      181 taccatagac gtgctgtagc agattttcct atcttcacga aacaaaaaga gaaattcggc
      241 ggttttgatc accacaacct tctataacta accttgccca gattgattgg tgttgctaaa
      301 cagacggcgc aggaatcaag gattattatg agcctccaac tctataacac cgtggcgcgg
      361 gagaagcagg aattcacctc tttgcaggaa gattccgtcg gcatgtatgt ctgtggaccg
      421 acggtctatg actatgccca catcggaaat gcacggccgg tcattgtctt tgatgtgctc
      481 tttcgtctac tgaaaacaat ctacggcgaa gagtgcgtga cctatgttcg caacatcacc
      541 gatgttgatg ataaaatcat tgctgcccat caggaaagcg gcgaggacat cgcttcaatc
      601 acgtcccgca ccaccgacgc ctttcacagc gatatggcgg cgctgggcaa tctcgagccg
      661 acaatcgagc cacgggcgac cgaccacatc ccacaaatga tcagcatgat tgagaaactg
      721 atcgccagtg gtcatgctta tgaagaacaa aaccacgttt gctttaatgt gccgtcaatg
      781 cctgattatg gccgcctggc gcggcttaac cgggatgagc tgatcgccgg cgctagagtt
      841 gatattgcgc cttacaaaaa agatgcggcg gattttatcc tctggaagcc gtccgatgag
      901 gatcagcccg gctgggacag cccctggggc tgggggcgtc cgggctggca tattgaatgc
      961 tcggcgatgt cgagtgaata tctcggcaaa acatttgata tccacggcgg tggtcaggat
     1021 ttgatcttcc cccaccatga aaatgaaatc gcccaaagct gttgcgcttt tggcgaaggc
     1081 accttcgcgc aaatctggat gcataatggc tacctcatgg tcgagggtga aaagatgtca
     1141 aagagcctcg gcaattttat caccgtgcac aatctgttga aagagcatca cggcgaagcg
     1201 gtccggctgt gcatgctgat gacccattac cgccagcccc tcaattggac tgcggatgga
     1261 ttggctcaag caaaaagcaa tcttgatagt ttttatgggg cgttacgcgc cacggtggag
     1321 attgttccag ccacggttgc tccagctgat aattttgtta gtgcacttgc tgatgatctc
     1381 aattcgccac aggcgattgc tgtcctgcat gaattggttg gcgagctaaa caaagccggt
     1441 aatgataagg ctaaagcaac ggccaaaaac aatctgctgg cggctggtaa tttgatgggc
     1501 ctgctgcagc ttgatccgga agactggttt aaatggacgc cggcaggcgc cagtgatggt
     1561 ctgagtgacg ccgatatcga tgccctcatc gaacagcgcc gcgaggcacg ggccaataag
     1621 gatttcgcta cctcggatca aattcgcgac gacctcgctg cccaaggtat cgtccttgaa
     1681 gacagcgcca acagcaccat ctggaaacgg ggctaaacct tctccgcctc gattttgcgg
     1741 cggcgccttc gcagcaataa accgaccggt aagaaaattg ctaatgaaac gatagcgggc
     1801 cagacaattg cccattgcag accgataaac tcagccagcc aaccgatgat gagagcggaa
     1861 atggccgggg cgccgaggac caaggaaaca ttaatactga ttacccgggc ccggtagtca
     1921 tcgtcaacgc tatgttgaat gagcgattgc gcgctcgtcg cggcgaaaac cagcaacccg
     1981 ccaaccaatg caagggtagc caaacccaca aagaaatttt ctgtcagggc aaaggcgatt
     2041 agaaaaagtg ctgaaccgga ttgtccaatt accagaaaag tcgtaagccc ttttgtcttg
     2101 ccccggaagg cgagaacgga cgcaaatatc agtgcgccga taccagccgc ggatgttaag
     2161 gctgcgagac cctctttac
//
LOCUS       DASCNL010000472         1720 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000993986, whole genome shotgun sequence.
ACCESSION   DASCNL010000472 DASCNL010000000
VERSION     DASCNL010000472.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000993986"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="QF359_06410"
     CDS             <1..563
                     /locus_tag="QF359_06410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HJO86577.1"
                     /translation="LAKIDPTKDVDGFHVYNAGRLATGSDGLVPCTPLGCIMMIKDQL
                     GEDLSGKQALVIGRSNIVGKPMAALLLKEHCTVTIAHSRTQDLAGEARRADILVVAVG
                     RAQMVKGDWIKEGAVVIDVGMNRLTPNEEGKSKLCGDVDFEAAKEVAGAITPVPGGVG
                     PMTIACLLQNTVTAACAQNNIEVPEV"
     gene            738..1559
                     /locus_tag="QF359_06415"
     CDS             738..1559
                     /locus_tag="QF359_06415"
                     /inference="COORDINATES: protein motif:HMM:NF024809.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO86578.1"
                     /translation="MLELYYLEEADSICSNRAVMTLNEKGINDWVPHKIVLMNGDQFT
                     PEYQKLNPKSQVPTLIHNGKAIRESSIICRYIDGLKSTPALTPDDPVERAYMDEWIKD
                     CDESGYQATASINFVTKFRLAVSIEKMEARWKQVTDIDRIHRQQSCIREGLDSLYVLR
                     AVGAWERIFTKAEKSLSDGRPWIMGNDISLVETTHAPFIKVLDLLRLLDIWMDGRPHL
                     QAWWERVKLRDSYKALEEYPGQSDDDDAPHAMAGRKVVSKFEELLDNHRKMMPKS"
BASE COUNT          469 a          377 c          444 g          430 t
ORIGIN      
        1 tactggccaa aatcgatccg accaaagatg tcgatggctt tcatgtatat aatgccggcc
       61 gcttggcgac cggttcagac ggtttggtgc cgtgtacgcc gctcggctgc atcatgatga
      121 tcaaagatca gctcggcgaa gatctttcag gcaaacaggc gctggtgatc ggccgctcta
      181 atattgtcgg caagccaatg gcagcccttt tgctcaaaga acactgcacc gtcaccattg
      241 cccattccag gacacaggat ctggccggcg aagccaggcg cgctgatatt ctggttgtcg
      301 cagtcggccg cgcccagatg gttaaaggtg attggattaa ggaaggtgct gtcgtcatcg
      361 atgtcggtat gaaccgtttg acgcccaatg aagaaggtaa atccaagctc tgcggcgatg
      421 ttgatttcga ggctgccaaa gaagtcgctg gcgccatcac accggtgcca ggcggtgtcg
      481 gcccgatgac cattgcgtgc ctcctgcaaa ataccgtcac cgccgcctgc gcccagaaca
      541 atattgaggt gccggaggtt tagaccaaag cagcaaagtt ggcgataaaa aaatgaagca
      601 cacttcgata gtggtgagtt agccgcggtc taagtaaacc aaagagtgtc cgctactgta
      661 cacaggcggg tactcagctt caattccact aaatctttga aatattgcca atataagtga
      721 agttgggaag aattaaaatg cttgaattgt actatctgga agaagccgac tcgatttgct
      781 cgaatcgagc cgtgatgaca ttgaatgaaa aaggcataaa cgattgggtg ccgcataaaa
      841 ttgtgttgat gaacggcgac caattcacgc cagagtatca gaagcttaac ccaaagtctc
      901 aggttcccac tctcatccat aatggcaaag ctatacgaga atcttcaatt atatgccgtt
      961 atatagatgg tcttaaaagt acaccagcat taaccccaga cgatcctgta gaacgggcct
     1021 acatggacga atggattaag gactgcgacg aatctggcta tcaagcaacg gcttcgatta
     1081 actttgtcac caagttccgt ctcgccgtat ccatagagaa aatggaagct cgttggaaac
     1141 aggtgacgga tattgaccgt attcatcggc aacagtcctg cattcgcgaa ggtcttgatt
     1201 cgctttatgt tttgcgtgcg gttggtgctt gggagcgtat ttttacgaag gctgagaaat
     1261 ctctttccga tgggcgtccg tggattatgg gtaatgacat cagtttggtc gagactactc
     1321 atgcaccttt tataaaagtt ctagacttgt tacgactatt ggatatttgg atggacggtc
     1381 ggcctcatct acaagcttgg tgggaacgtg ttaagctgcg cgatagttat aaagcgcttg
     1441 aggaataccc tggtcaaagc gatgatgatg atgccccaca tgccatggcg ggacgaaagg
     1501 tagtatcaaa gttcgaggag ttgttggata atcaccggaa aatgatgcca aaatcataag
     1561 acaataaata gaattgctta cgtcaaatga ttatttctaa taagataata agcaggaagc
     1621 tacgcatatt gtgcaatgtc cgcaatgagt catgtgtgga cggctccctt ttggcaagga
     1681 ttaatttgac gtttctgcaa attggtcggg tgcagtcatg
//
LOCUS       DASCNL010000473         1334 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000995265, whole genome shotgun sequence.
ACCESSION   DASCNL010000473 DASCNL010000000
VERSION     DASCNL010000473.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000995265"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="QF359_06420"
     CDS             complement(<1..182)
                     /locus_tag="QF359_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HJO86579.1"
                     /translation="MAEINLFTPITVAGLSLSHRVIMAPLTRMRATVPGNTANELMAE
                     YYAQRASQGGLIIAEAT"
     gene            complement(308..>1334)
                     /locus_tag="QF359_06425"
     CDS             complement(308..>1334)
                     /locus_tag="QF359_06425"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86580.1"
                     /translation="TNPRLLLLDEIAGGLVESEVEELEQNIDDLKSHGQSMIIIEHVI
                     RTLFNHSDRILVMNFGIGVAIDTPPKIAENEEVIDIYLGEELEQKEMVSTAQTPATKR
                     DTILAVSNISAGYGEFQALFDVSLEIKKGEIVALIGINGAGKSTLTRAVTSQIPITSG
                     SVSWRGEDLTKYQAYDIVELGISQCLEGRKIFNHMTVLENLEIGAYPKHAREKRFDTI
                     KWIYELFPRLEERAGQLGGTLSGGEQQMLAIGRALMALPELIIFDEISLGLAPKIIDD
                     IYEIIPKIVEHGTTVLLIEQNVHRSLSIADRAYILERGRVTLTGSAQELIENQEIQEA
                     YFGLETH"
BASE COUNT          333 a          342 c          311 g          348 t
ORIGIN      
        1 gttgcctcgg cgatgatcag tccaccttgg ctggcgcgtt gggcgtaata ctcggccatc
       61 aactcgttgg cagtgttgcc gggaaccgtt gcacgcatgc gcgtgagcgg cgccattata
      121 acgcggtgcg ataacgaaag tccggcgacg gtgattgggg tgaataaatt gatctcagcc
      181 atgagcgcta atgaaccaca aaaccctgaa ctcggcaatg ctgcaaacgc gtcatcacat
      241 ccttccacaa caaaaattgt tttttttaaa aaatcctata cagttaaatc cagttagcat
      301 catcacttta atgggtttcc agaccgaaat aggcctcttg gatttcctgg ttttcgatca
      361 gttcctgggc gctgccggtg agcgtcacgc ggccccgctc caggatatag gcgcggtcag
      421 caatgcttaa gctgcggtgc acattttgct caatcagcaa aaccgttgtg ccatgttcga
      481 caatttttgg aatgatttca taaatgtcgt cgatgatctt gggtgcgagg ccgagggaaa
      541 tttcatcgaa aataatcaat tccggcagtg ccatcagcgc ccggccgatc gccagcatct
      601 gctgttcacc accggacaag gtgccaccca attgaccggc gcgctcctcc agcctcggga
      661 acagctcata aatccatttt attgtatcga agcgtttctc ccgggcatgt ttaggatagg
      721 caccaatctc cagattttcc agcacggtca tatggttgaa aatcttccgg ccttcgagac
      781 attgggatat gccgagttca acaatatcat aggcctggta tttggtgaga tcttcacctc
      841 gccacgaaac gctaccagaa gtgatgggta tctgactggt aacagcgcgg gtcagtgtcg
      901 atttaccagc gccattgata ccgatcaggg caacaatttc gcccttcttg atttcgagcg
      961 agacatcaaa caaagcctga aactcaccat aaccggcact gatgttggat actgccaaaa
     1021 tagtgtcacg tttggtagct ggtgtttggg ccgtactgac catctccttc tgttctaatt
     1081 cctcgcctaa ataaatatca ataacttctt cgttttcagc aatttttggt ggcgtatcta
     1141 tggcaacccc gatgccgaaa ttcatcacca aaatgcgatc cgaatgattg aatagagtcc
     1201 ggatgacatg ttcgatgatg atcatgcttt gaccatgaga tttaagatca tcgatattct
     1261 gttcaagctc ctcgacttcg ctttcaacca gaccgccagc aatctcatca agcaagagca
     1321 gccgcggatt tgtc
//
LOCUS       DASCNL010000474         1036 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000000998222, whole genome shotgun sequence.
ACCESSION   DASCNL010000474 DASCNL010000000
VERSION     DASCNL010000474.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000998222"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..765)
                     /locus_tag="QF359_06430"
     CDS             complement(<1..765)
                     /locus_tag="QF359_06430"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86581.1"
                     /translation="MVNSKKSLFCFGPGFSLKALARQLLNNDWSVSGTYREADGAENL
                     AALGIDPIPFNAADAAMESATAIISTVPPSAEGDPVLARYGDQLAKISKQAWIGYLST
                     TGVYGDTGGALVDEASALNPSNDRSQWRATCEQGWLSVSAHIFRLSGIYGQGRSSVDR
                     LRLGLARRIDNPGHLFSRIHVDDIAQTLIASINQPSPGQIYNLCDDEAAEQQVVEAYA
                     AELLGIEPPPLVPFDEAIREMSPIAKTFWQDNRRVDN"
     gene            848..>1036
                     /locus_tag="QF359_06435"
     CDS             848..>1036
                     /locus_tag="QF359_06435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86582.1"
                     /translation="MLSLSWPVEAHEIDAKKEYARCMGLAKSKPQKGFDAAIAWIGLG
                     GGDAAKDCQAVALLELKQY"
BASE COUNT          264 a          254 c          269 g          249 t
ORIGIN      
        1 attgtcgacc cggcgattgt cctgccaaaa ggttttggcg attggtgaca tttccctgat
       61 tgcctcatcg aacggaacca gaggcggagg ctcaatacca agcaactctg cagcataggc
      121 ttcgactacc tgttgctcgg cggcttcatc atcacaaaga ttgtaaatct ggccgggact
      181 aggctggttg attgaggcaa tgagcgtttg ggcaatgtcg tcgacatgga tgcgagaaaa
      241 aaggtgaccg ggattatcaa tccggcgcgc taatcctaag cgtaatcgat ccaccgagga
      301 tcggccctgg ccgtaaattc cggaaagtct aaaaatatgt gcggatacgc taagccagcc
      361 ttgctcacag gtggcgcgcc attggctgcg gtcgttggag ggattcaggg ccgaagcctc
      421 gtcaaccaaa gctccgccgg tatccccgta aaccccggtt gtcgagagat agccgatcca
      481 agcttgcttg ctgatttttg caagctgatc accatagcgc gccaataccg ggtctccttc
      541 agcgctgggg ggtacggtgg aaataattgc cgtcgcactt tccatagctg catcagcggc
      601 attaaaaggg atcggatcaa tacccagagc agccaaattt tcagcaccgt ccgcttcccg
      661 atatgtccca ctgacggacc agtcattgtt taaaagttgg cgcgccaggg cttttagtga
      721 aaacccgggg ccaaaacaaa aaagactttt tttactgttt accattaata ttaccgctat
      781 cgaatttatt ggagtctaac gataagacag taacataaac agaaccctct ttttactttt
      841 gatatttttg ctcagcctat catggccggt tgaagcgcat gagattgatg ccaaaaaaga
      901 atatgcccgc tgtatgggat tggcaaaatc aaagccgcaa aaaggttttg atgctgccat
      961 cgcctggatc ggtttgggcg gaggagatgc cgccaaggat tgtcaggcgg tcgccttgct
     1021 ggagctcaaa caatat
//
LOCUS       DASCNL010000475         1219 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001003222, whole genome shotgun sequence.
ACCESSION   DASCNL010000475 DASCNL010000000
VERSION     DASCNL010000475.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1219)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1219)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001003222"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="QF359_06440"
     CDS             <1..182
                     /locus_tag="QF359_06440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86583.1"
                     /translation="WLIDSFGFMQMKRHCMQKWILPLLVALMTLPILSACGKKSELDK
                     PPGKEPEYPRKYPGY"
     gene            203..>1219
                     /gene="lysA"
                     /locus_tag="QF359_06445"
     CDS             203..>1219
                     /gene="lysA"
                     /locus_tag="QF359_06445"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HJO86584.1"
                     /translation="MDHFDYKNGALAAEDMPISDIAEAIGTPFYCYSTATIEHHYRVF
                     EEALAGLPATICYAVKANSNVAVIKTLADLGAGADVVSSGELTRALKAGVPASKIIFS
                     GVGKTRDELAHALKENILQINVESEPELQALNEIAGSMGITAPVAFRINPDIDAHTHD
                     KISTGRSEDKFGIEWTRIHEVVKAANSLSHIENVGLAMHIGSQLTELEPFRDAFIRLK
                     DVVTILRADGHKIPRLDLGGGLGIPYDTATTPSPAEYGKVVAEILGDLDADFLFEPGR
                     LIVGNAGILVTSIVYAKEGATRRFLILDAAMNDLMRPSLYEAKHDIVPVSEPYSGANM
                     ECVNV"
BASE COUNT          317 a          293 c          310 g          299 t
ORIGIN      
        1 cttggctaat agatagtttt ggatttatgc agatgaaacg acattgtatg caaaaatgga
       61 tattaccgtt attggtcgct ttaatgacgc tgccaatcct gtcagcgtgc ggcaagaaaa
      121 gcgagctgga taaaccgcct ggcaaagagc ctgaatatcc gcgtaaatat cccggttatt
      181 gatctcagaa gcagactcag atatggatca ttttgactat aaaaacggcg ccctcgccgc
      241 cgaagacatg ccgatttccg atattgcgga agccatcggc acgccttttt attgctattc
      301 gacggcgacg atagaacatc actatcgggt ttttgaagaa gcactggctg gtcttccagc
      361 gaccatctgc tatgccgtta aagccaattc aaacgtcgcc gtcatcaaaa ccctcgctga
      421 tctaggcgct ggcgccgatg tggtgtcatc aggcgaattg acgcgcgccc tcaaagccgg
      481 agtgccggcc agtaaaataa tcttttccgg tgtcggtaaa acgcgtgatg agctggccca
      541 cgcgctgaaa gaaaatatcc tgcagatcaa tgtcgaatct gagccggaat tgcaggcctt
      601 aaacgaaatt gccggttcaa tgggtataac ggctccggtt gcgtttcgca ttaatcccga
      661 tatcgatgcc catacccatg acaaaatatc gaccggacgg tcggaagata aattcggaat
      721 tgagtggacg cgcattcatg aggtcgttaa agcagcaaat agcctgtctc atatcgaaaa
      781 cgttgggctg gcgatgcata ttggctccca attgaccgag cttgaaccat ttcgagacgc
      841 tttcatccga ctcaaagatg tcgtcactat tttgcgtgcc gacgggcata aaattccaag
      901 acttgacctc ggtggtggcc tcggtatccc ttacgacact gcgacgacgc caagtccagc
      961 ggaatacggc aaagtcgtcg ctgaaattct cggtgatctt gacgctgatt ttttgtttga
     1021 gccgggccga ctgatcgtcg gcaatgcagg aattctagtc accagtattg tttatgcgaa
     1081 agaaggagca acccgccgat tcttgatttt ggatgcagcg atgaatgatc taatgcggcc
     1141 cagcctgtat gaggctaagc acgatatcgt gccggtgagc gagccatact caggcgcaaa
     1201 tatggaatgc gttaatgtt
//
LOCUS       DASCNL010000476         3214 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001004403, whole genome shotgun sequence.
ACCESSION   DASCNL010000476 DASCNL010000000
VERSION     DASCNL010000476.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3214)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3214)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001004403"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="QF359_06450"
     CDS             complement(<1..428)
                     /locus_tag="QF359_06450"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO86585.1"
                     /translation="MSDNSPQNLGNLFESQPLKGQHALITGGSRGIGAATSNALAALG
                     ASITLLARDVGRLKQQSDHLQAEYDTKVFFASADMTSEQDIADSFAQSVAANGAIDIL
                     VNNAGIGKSAPFHRMDLEFWQAILDLNLTGTFLCTKQVFDA"
     gene            complement(486..1496)
                     /locus_tag="QF359_06455"
     CDS             complement(486..1496)
                     /locus_tag="QF359_06455"
                     /inference="COORDINATES: protein motif:HMM:NF014893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJO86586.1"
                     /translation="MSSDTIRVASLGLGWWSDVLAEGITNAKGIEVVSCFTRSEDKRK
                     AFAEKFNCAYAGSYEELLEDDTIDAIINTTPNNIHLETTKQAADAGKHVFLDKPIANS
                     VGEGMEIAKICHAANVRLSIGFQRRRESQFRWVQEEIQAGRFGQIVQAEANISRDRLG
                     AFEPGHWRYTAEGMPGGVMLQIGPHYIDVLEMLIGPIVEVSGMLSQLVLPGDNPDVAG
                     LVMKHENGAISILNAGYASAGENYVMNIYGKDASALYSLHTGMYHVKRGEKEPVKMEF
                     EANDTIAEQMEEFGDCIRYNTEPEVGGEWAARSLAVIRAGVKSANVGRYVSIDEIMKS
                     GE"
     gene            complement(1499..3004)
                     /locus_tag="QF359_06460"
     CDS             complement(1499..3004)
                     /locus_tag="QF359_06460"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO86587.1"
                     /translation="MSPDIIDGFSQASHLETILAVAAGCFIGLVVGMIPGLTISTGII
                     IVLPLTFVLEPEISIALLLGLYVSGMTGGSFSAILLNIPGTPSASATALDGHPLARNG
                     EAGRALGIAITASFLGGLFSFLCLYFIAPLLAEIALKFQSPDLFSLVFFGLTIICSFA
                     AKSLIKGLLSAVIGLAIVTVGQDPMMGTARFTFDQVNLISGIHFLTALIGLFAVPQLT
                     DNFADMMKSETVTKKAANIKSVLPKLADLKLMRLPVIVGAPIGSFLGILPGAGGPIAA
                     FISYDYTKKLSKNPEEFGSGSPQGIAAPESANNAVTGGALIPMMTLGIPGDPVTAILI
                     GALLIHGLAPGPLLFIENGEFAYGLIFSFFWANIFNIVIAFIGLRYLVKVLVIPRTFL
                     MPTIAILCVIGSYALRNNFFDVYVMFGFGLLGLAMRWLDMPIVPLLLAMVLGRQLEEH
                     LRVSLIASKNDVTVFFTHGFSLFFLCLAAASVFWSFWAEHKSKQKQEQLEI"
     gene            complement(3004..>3214)
                     /locus_tag="QF359_06465"
     CDS             complement(3004..>3214)
                     /locus_tag="QF359_06465"
                     /inference="COORDINATES: protein motif:HMM:NF018979.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HJO86588.1"
                     /translation="LSVAYFVALPLLGFVVANIMFFAGLMYLYGERRPLWIAAGSILI
                     SLIVFFLFREVFQILLPSGILQSVL"
BASE COUNT          882 a          818 c          814 g          700 t
ORIGIN      
        1 gcgtcaaaaa cctgcttggt gcagagaaac gtgccggtga ggttgagatc gaggatggct
       61 tgccagaatt cgagatccat acgatggaaa ggcgcacttt tgccgatgcc ggcattgttg
      121 accaggatat cgatagctcc gttggccgcc acgctttgag caaacgaatc agcgatgtct
      181 tgctcactcg tcatgtcggc actggcgaaa aataccttgg tgtcatattc ggcctgcaga
      241 tgatcgcttt gctgtttcaa tctgccgaca tcacgggcca gcaaggtaat actggcgccc
      301 aaggctgcta atgcgttgga ggtagcggca ccaataccgc gcgagccgcc ggtgatcagc
      361 gcatgctgac ctttaagcgg ttgggactcg aatagattac cgaggttttg ggggctattg
      421 tcactcattc agcaatcatc gaaaattaca gcccttaaga caaccgattt atattccaaa
      481 acctgttatt cgccggattt cattatctca tcgatggata catagcggcc cacattggcg
      541 gatttcacac ccgcccggat cactgccagg gagcgtgcgg cccattcacc accaacctcc
      601 ggctcggtat tgtagcggat gcagtcgcca aattcttcca tctgttcagc aatggtatcg
      661 ttggcttcaa actccatttt aaccggttct ttctcgccgc gtttaacatg atacatgccg
      721 gtatggagtg aatagagcgc cgatgcatct ttaccgtaaa tattcatgac atagttctca
      781 ccggccgagg catagcccgc attcaaaatc gaaatagcgc cgttctcgtg tttcatgacg
      841 agcccagcga cgtccggatt gtcgcccggc aagaccagct gtgacagcat gccagaaacc
      901 tcgacaattg gccctatcaa catttccaaa acatcaatat aatgcgggcc gatttgcagc
      961 atgacgccgc ccggcatacc ttcggcggtg tagcgccaat ggccgggttc aaatgcgcct
     1021 aagcggtcgc ggctgatatt ggcttcggcc tggacgatct gcccgaagcg tccggcttga
     1081 atttcttcct ggacccagcg gaactgactt tcgcggcggc gctgaaagcc gatcgagagt
     1141 ctgacattag cggcgtggca aatcttggcg atttccatgc cttcaccgac agaattagcg
     1201 atcggcttat caagaaagac gtgtttgccg gcatccgccg cttgtttggt tgtttccaag
     1261 tgaatattgt tgggcgttgt attgatgatg gcgtcgatag tgtcatcttc cagcagttcc
     1321 tcgtagctcc cggcataggc gcaattgaat ttctcggcaa aagctttgcg cttgtcttca
     1381 gaccgggtaa agcaggatac aacttctatg cccttggcgt tggtgatgcc ttcagccaac
     1441 acatctgacc accagccgag gccaagagag gcgacacgga ttgtatctga actcataact
     1501 aaatctccaa ctgctcttgt ttttgtttac ttttgtgttc ggcccaaaat gaccagaaaa
     1561 cagatgccgc tgccagacat aaaaagaata agctaaaccc atgggtaaag aaaacggtga
     1621 cgtcattttt cgacgcgatc agggataccc ggagatgttc ttccaattga cggccgagca
     1681 ccatcgccag caacaagggt acaatcggca tatcaagcca gcgcatagcc agacctagca
     1741 ggccgaagcc aaacatcaca tagacgtcga agaaattatt gcgcaacgcg tagctgccga
     1801 tgacgcacag gatagctatc gttggcatca ggaaagtgcg gggaattact aggactttga
     1861 ctaaataacg caggccaata aaggcgatga cgatgttgaa aatattggcc caaaaaaaag
     1921 agaatataag tccataagca aattcaccgt tctcgatgaa gagcagtggg cccggcgcta
     1981 acccatgaat aagcaaggca ccgattaaaa tagctgtcac cggatcaccc ggaatgccga
     2041 gagtcatcat ggggataagc gcaccgccgg taacagcatt attggctgat tccggggcgg
     2101 caataccttg tggcgagccg ctaccaaatt cttccgggtt tttgctcaat ttcttggtgt
     2161 agtcgtaact gataaaagca gcaatcggtc caccggcacc cggcagaatc cctaaaaatg
     2221 aaccgattgg cgcgccgaca atgaccggca ggcgcataag tttcaaatct gccagtttcg
     2281 gtaacacgct tttaatattg gcggcctttt tggtcactgt ttctgatttc atcatatcag
     2341 cgaaattgtc ggtcaattgc ggcacagcga agagaccgat cagcgccgtc agaaaatgaa
     2401 tgccggagat taaattgacc tgatcaaaag taaagcgggc ggtacccatc atcgggtcct
     2461 gtcctacggt tacaatagcc aagccgatca cggctgacag tagacctttg atcaaggatt
     2521 tggcggcaaa gctgcaaatg atagtgagac cgaaaaagac cagactgaaa agatcaggcg
     2581 attgaaattt aagcgcgatt tcagccaaga gcggcgcaat aaaataaagg cagagaaagc
     2641 taaacaagcc gcctaagaaa cttgccgtga tggcgatacc gagcgcgcgg cccgcttcgc
     2701 cgtttcttgc taaggggtgc ccgtccaatg cggttgctga agccgacggt gtgcccggaa
     2761 tattaagtaa aatggccgaa aaactgccgc cggtcatacc gctgacatag agacccagta
     2821 gcagcgcaat agaaatttcc ggttccaaaa cgaaggtcag cggcaagaca atgataatac
     2881 cggtggagat ggtcaggccc ggtatcatgc cgacgaccag accaataaaa cagcccgccg
     2941 caaccgctaa aatggtttca agatggctcg cctgagaaaa gccatcaatg atatccgggc
     3001 tcatcacaaa acactctgca agatgccgga aggtaataaa atttgaaaca cttcccggaa
     3061 cagaaaaaag acgatcagtg aaatgaggat cgagccggca gcgatccaca gcggccggcg
     3121 ctcgccatag agatacatca gcccggcaaa aaacattatg ttagcgacga caaaaccgag
     3181 taacggcaaa gcaacgaaat aagcgactga caat
//
LOCUS       DASCNL010000477         2166 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001004907, whole genome shotgun sequence.
ACCESSION   DASCNL010000477 DASCNL010000000
VERSION     DASCNL010000477.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001004907"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..378
                     /locus_tag="QF359_06470"
     CDS             <1..378
                     /locus_tag="QF359_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtoQ family protein"
                     /protein_id="HJO86589.1"
                     /translation="AQDLPVQIVAPVTNHEASDDCGVEILGQEDNPFWKDHKGAQVNA
                     IRTRTLIKKSDVVVVKFGDKYRQWNAAFDAGMAAALGKPIIVLHAEDLTHALKEVDAA
                     ALAVAESPSQVVRVLNYAINGSL"
     gene            complement(396..938)
                     /gene="thpR"
                     /locus_tag="QF359_06475"
     CDS             complement(396..938)
                     /gene="thpR"
                     /locus_tag="QF359_06475"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HJO86590.1"
                     /translation="MLRLFVGLEIAAPIKAELAKISSGFPEASWIVPENLHMTLNFIG
                     DVNECVAEDIDEALRGIEAASFDLTINGVGYFESRNKVRAVWADVAAEPDLRHLHAKV
                     AQALILAGQEPEHRKFRPHVTLARLKRVPVTAVAGYLEAQAELLLPPYSVDYFTLFRS
                     HLGHAGAAYEALARYQLNAS"
     gene            complement(1243..2013)
                     /locus_tag="QF359_06480"
     CDS             complement(1243..2013)
                     /locus_tag="QF359_06480"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HJO86591.1"
                     /translation="MKTIRKALEILEQFSETRPVLGITELSDATGINKSIVHKILQTL
                     MEGALIARDSETRRYRLGSGIVNLAGRHLANLRPLDIARPHLLRLREETAETIHFVVQ
                     ESQSIMITQVYESPQSLRVSSHLGEVGSLHGSAAGKVFLAFGSPSQLERFLEGSLEIL
                     TPKTITDPDKLQSELEKVRRLGYSTSREEQEIDFCAIAAPIFDTTGKMPGAVAIAVPP
                     SRFKSEKIAKLSQKLLMSTNTIMDEFGTSPTLRPKLNI"
BASE COUNT          570 a          538 c          512 g          546 t
ORIGIN      
        1 gcgcaagatc tgccggtaca gatcgtggcg ccagtgacca atcacgaagc cagtgatgac
       61 tgcggcgttg aaattctggg tcaggaagac aatccgttct ggaaagacca taagggcgcg
      121 caggtgaatg ctattcgcac ccggaccttg attaaaaaat cagatgtcgt ggtggttaag
      181 ttcggtgaca aataccgtca atggaacgcg gcctttgatg ctggcatggc agcagccctc
      241 ggtaagccga tcattgtgct gcacgctgaa gaccttaccc acgctttgaa agaagtcgat
      301 gcggcggctc tggccgtcgc cgaaagcccg tcgcaagtcg tccgggtcct caattacgcg
      361 atcaatggga gtttgtagtt tttaaaactg ccaaactaag aagcgttgag ctggtagcgc
      421 gcaagcgcct cataggctgc gccggcatga ccaagatggc tgcggaatag tgtaaaataa
      481 tcgactgaat acggcggcaa taagagttcc gcctgtgcct ctaaataacc ggcaacagcg
      541 gtgaccggaa cacgcttcaa gcgtgccaag gtcacgtggg gtctaaattt acgatgttcc
      601 ggttcctggc ccgccagaat gagcgcctgc gccactttgg cgtggaggtg tctgagatcg
      661 ggctccgcgg caacatcagc ccacaccgca cgtactttat tccgggattc aaaataaccg
      721 acgccgttga tcgtcagatc aaaagatgcc gcttcaatgc ctcgtagcgc ttcatcaata
      781 tcttccgcca cgcattcatt gacatcaccg atgaaattca gggtcatatg aagattttca
      841 ggcacaatcc aactcgcctc cgggaaacca gaggaaattt ttgccaattc agctttaatg
      901 ggagcggcaa tctcaagccc gacaaataag cgaagcattt atcagtaacc gaccagactg
      961 ttaaacaagc ggttaaaaaa cccaagattt actttaaatg cgcatagtca atcccgaaaa
     1021 cattgttttc tgccctgcaa cccacttcat caccctggac ttaatttgtc cgcgcgaagc
     1081 atccaccaca acccgtcacc tgaaattaag ccgaagtgat aaatatgttt accaatgtca
     1141 gcttatctcc caaaagcgga caccaaattg atatgtctaa agtatctgct tctagccaat
     1201 agcggatatt attgctggga cgatctacaa attacaaaat tgctagatat ttagtttagg
     1261 ccttaaggtg ggagacgtgc caaattcatc cattatagta ttagtactca tcaatagttt
     1321 ttgacttaac ttggcaatct tctccgattt gaaacggctt ggtggcactg caattgccac
     1381 agcgcccggc attttcccgg ttgtatcgaa aatcggtgcg gcaatggcac agaaatcaat
     1441 ctcctgctct tcccggctgg tgctatagcc gaggcgccgc accttttcca actcggattg
     1501 caatttgtcc gggtctgtaa tcgttttcgg tgttaagatt tccagactgc cttctagaaa
     1561 gcgctccaat tggctcggac tcccaaaagc caaaaaaacc ttgcctgccg ccgatccatg
     1621 cagcgagccg acttcaccaa gatgcgagga aacccttaga gactgaggac tttcatagac
     1681 ctgagtaatc ataatcgact ggctttcttg gactacgaaa tggatggtct cagccgtttc
     1741 ttcccgcagc cggagcaaat gggggcgggc aatatctaga ggtcgaagat ttgccaaatg
     1801 ccggccagca agattaacta tacctgatcc tagccgataa cgacgggttt ccgaatcgcg
     1861 ggcaattaag gcaccttcca tcaatgtctg taaaattttg tggacaatgg atttgttgat
     1921 gccggtggcg tcactcaatt cggttatccc cagcaccgga cgggtttcag agaactgttc
     1981 tagtatttcc aaggccttcc ggattgtttt caatctttca tccaatcatc aacaatgggc
     2041 gttaaccgcc actatttttt tgttattaga aataatgttt tattcgctgg ggtgaagcaa
     2101 tagtgatcgg gttggaatat agtaatttgg attaatcggt attttccatt taagtcactg
     2161 gctgcc
//
LOCUS       DASCNL010000478         1225 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001005996, whole genome shotgun sequence.
ACCESSION   DASCNL010000478 DASCNL010000000
VERSION     DASCNL010000478.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001005996"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            74..>1225
                     /locus_tag="QF359_06485"
     CDS             74..>1225
                     /locus_tag="QF359_06485"
                     /inference="COORDINATES: protein motif:HMM:NF013662.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HJO86592.1"
                     /translation="MPEYTIRICNSIACDLAGADELIEKVKYNLGDMVRIITVPCVGN
                     CDNAPIAVYGKRQIKQASAKKIGAALEKDQSSPHLPDYQTMEKYQADDSGYEFLKSCL
                     EGNKERSEIIGEINQAGLRGMGGAGFPTARKWQFLENTGKPRVLVVNADEGEPGTFKD
                     RYCFETTPHKILEGMLIATWAIEAEDIYIYLRDEYPHIHELLTIEIEKLKQAGISSFA
                     DIHLRRGAGAYVCGEESALLESIEGKRGLPRNRPPFPAQQGLFQRPTLINNVETLYWV
                     REILANGAEWFQAEGWPRFYSVSGRVKNPSVVRAPSGITAKQLIEDHCGGMLKGHSFK
                     AYLPGGASGGIMPAALADEPLDFSSLDAHGCFVGSAALVVLSDQDDIKRV"
BASE COUNT          350 a          256 c          314 g          305 t
ORIGIN      
        1 atcaccgagc gaaatctatg aggatgcaac attttattat cactttgaag tcgcggatta
       61 ctaggctggt aaaattccgg aatataccat aagaatatgt aacagcattg cgtgtgattt
      121 ggccggtgcc gatgagctaa ttgaaaaagt gaaatataat ttaggtgata tggtgcgtat
      181 aatcaccgtt ccctgtgttg gcaattgcga caacgctcct attgccgtct atggcaagcg
      241 tcaaatcaag caggcgagcg caaaaaaaat cggcgctgca ctggaaaaag atcaatcctc
      301 accgcatctg cctgactatc aaacgatgga aaaataccaa gcagatgaca gcggttatga
      361 atttttaaaa tcttgtctgg agggcaataa agaaaggtca gagatcatag gtgagataaa
      421 tcaggctgga ttacgcggca tgggtggcgc tggatttccg accgctcgca aatggcaatt
      481 cttggaaaat accgggaaac cgcgtgtgct ggtggtaaat gctgacgaag gtgagcccgg
      541 tacttttaaa gatagatact gttttgaaac cacaccgcac aaaatcttgg aaggtatgtt
      601 gatcgccacc tgggctattg aggcggaaga tatctatatc tatttgcggg acgaataccc
      661 tcatattcat gaacttctga cgatcgaaat cgagaaatta aaacaggcgg gaatttcctc
      721 tttcgcagat attcacctgc ggcgaggtgc cggtgcctat gtatgtggtg aagaaagcgc
      781 gctattagaa agtatcgaag gcaaacgcgg attgccgcgc aaccggccgc cctttcctgc
      841 ccaacaagga ttatttcaac gcccaacact gataaataat gtcgaaacac tctattgggt
      901 gcgagaaatt cttgccaacg gcgcggagtg gtttcaagcg gaaggatggc ctcgatttta
      961 ctcagtttcc ggccgtgtaa aaaacccaag tgtggtgagg gcgccatccg gcattactgc
     1021 aaagcaatta attgaagatc attgtggtgg gatgttgaaa ggccacagct ttaaagccta
     1081 tctaccaggt ggcgcttcag gcggtataat gccagccgct ttggcagatg aaccgttgga
     1141 tttcagcagt ttagatgccc atggttgctt tgtcggctca gcggcacttg tggttctttc
     1201 agatcaagat gacatcaaaa gagtt
//
LOCUS       DASCNL010000479         2132 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001006860, whole genome shotgun sequence.
ACCESSION   DASCNL010000479 DASCNL010000000
VERSION     DASCNL010000479.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001006860"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="QF359_06490"
     CDS             <1..572
                     /locus_tag="QF359_06490"
                     /inference="COORDINATES: protein motif:HMM:NF024875.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S double cluster binding domain-containing
                     protein"
                     /protein_id="HJO86593.1"
                     /translation="VEAGLGTLGLNQQLITPEYGPRVILGLVLTSADIEPDSMMEEVL
                     CRGPECGRCLMACPADAVQHWDRDWEACDKYLSPFGFEFLSDYLTNVLKEPDQANKIG
                     MLRGMESSEIFQAMLRGSGIITGCRRCADVCPVGDDYEELLKKWVDEIPEETPEKLKR
                     LEVMITEASLPTSYEKQKRWIGNFKPRGQ"
     gene            572..1849
                     /locus_tag="QF359_06495"
     CDS             572..1849
                     /locus_tag="QF359_06495"
                     /inference="COORDINATES: protein motif:HMM:TIGR02486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase"
                     /protein_id="HJO86594.1"
                     /translation="MSNPVTDHNKPQPLSLDNLPTNEGPYQGQLHDARDEACGFEILP
                     NFERFNKNNDIYNRGRWDERIMSKKVIDWFRGMYRPDIAARDRDGYTARDFAFRLGGW
                     VGTNLLIERNLKNGRVDGYQDDIEIYSEIAKEKVEIESTEKMSEEIKRISRVFGAEIT
                     GITSADERWHYSHLYDADHNAEKPVNLPEGLVNTIVIGTSMDHNIIKTYPSATAGTAV
                     GFGYSKDANTMQAIGTFIQAMGYRAVASLNDTAQKVPYAIQAGLGENGRHSMLITPKF
                     GPRTRLGQIFTDMPLAHDGPKRFGIKEFCEICQRCAESCPPRAIPKGPPTDTPLNASN
                     HVGIRKWSIDNEKCFNFWCNQGTDCGICIRDCPYNMDTSTWFKKKYFKFWVWLAGSSL
                     RRLALWLDYKIGDGGRQESNWWWAGGGDRSLVK"
     gene            1888..>2132
                     /locus_tag="QF359_06500"
     CDS             1888..>2132
                     /locus_tag="QF359_06500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86595.1"
                     /translation="MANPFPEVAPELQRPEFETMVHMLAHAANEHPERTAIISGENEI
                     TYADYFACAAGLATALIEMGVKGERVVVLKSNSIVTSV"
BASE COUNT          555 a          508 c          568 g          501 t
ORIGIN      
        1 ccgttgaggc agggctcggc acgcttggtc tgaaccaaca actcatcacg ccggaatatg
       61 gtcctcgcgt aatattaggg ctggtattga cgtcggcgga tattgagccg gattcaatga
      121 tggaagaggt tttgtgccga ggccctgaat gcgggcgctg ccttatggct tgccccgccg
      181 acgccgttca acattgggat cgggattggg aggcttgcga caaatatctt tctcccttcg
      241 gtttcgaatt tttatcagat tacctcacca acgtcttaaa agaacctgac caggccaata
      301 agatcggtat gttgcgcggc atggagtctt cggaaatttt tcaagccatg ttacgcggca
      361 gcggcataat taccggctgt cgccgctgcg ccgatgtctg tccagttggc gacgactatg
      421 aggagctatt gaagaaatgg gttgatgaaa taccggaaga aacaccggag aagctaaaac
      481 gtcttgaagt gatgataact gaagcctcgc taccaaccag ttacgaaaaa caaaaacgtt
      541 ggatcggaaa ttttaagccg agagggcaat aatgagtaat ccggtaaccg atcacaataa
      601 accgcagcca ttatcgctcg acaatctgcc gacgaatgaa ggcccttatc agggccagct
      661 tcacgatgct cgcgatgagg catgcggctt tgaaatcctg ccaaactttg agcgctttaa
      721 taaaaataat gacatttaca atcgcggccg ctgggatgag cgcatcatgt ccaaaaaggt
      781 cattgattgg tttcgcggta tgtatcgccc ggacatcgcc gcccgcgacc gggatggcta
      841 tactgccaga gactttgcct tccggcttgg cggctgggtc ggcaccaatt tgctgatcga
      901 gagaaacctt aaaaatggcc gggtcgatgg ctaccaggat gacattgaaa tttattcgga
      961 gatcgctaaa gaaaaagtcg aaatagaatc gaccgaaaaa atgtcggaag agattaaacg
     1021 tatttcgcgg gttttcgggg ctgagataac cggcatcact tcagccgatg agcgctggca
     1081 ctacagtcat ttatatgatg cggaccacaa tgcagaaaag ccggtaaatt tgccggaagg
     1141 gctggtgaac actatcgtta tcggcacctc gatggatcac aatataatca agacctatcc
     1201 gtcggcaacg gcaggaacgg cggtcggttt cggttattca aaagacgcaa ataccatgca
     1261 ggcgattggc acgtttattc aggctatggg gtaccgcgcc gttgcctcgc tgaatgacac
     1321 ggcgcagaaa gttccatacg ccatccaagc gggacttggc gaaaacggac gccattccat
     1381 gcttataaca cccaaatttg gtcctcgtac tcgattgggt caaatcttca ccgacatgcc
     1441 tctggcccat gacggaccaa aacgtttcgg catcaaggaa ttctgcgaga tttgccagcg
     1501 ttgtgctgaa tcgtgtccgc cccgggcgat cccaaaaggc ccgcccactg atacgccttt
     1561 gaacgcctcg aaccatgtcg gtatccgcaa atggtccatc gataatgaaa agtgttttaa
     1621 tttttggtgc aatcaaggta ccgattgtgg tatttgcatt cgcgactgtc cctacaacat
     1681 ggatacgtcg acctggttta agaaaaagta ttttaagttt tgggtctggc tggctggctc
     1741 gtcactgcga cgcttggcgc tttggctcga ttacaaaatt ggcgatggcg gtcgccagga
     1801 gtccaactgg tggtgggccg gtggcggtga tagatcattg gtcaaataat ttagcagaca
     1861 gcaaattaat agtggggagg aaatatcatg gctaatccat ttccagaggt agcaccagaa
     1921 cttcagcggc cagagtttga aacgatggtg cacatgctgg cccatgcggc caatgaacac
     1981 cctgagcgca cggcaattat cagcggtgaa aatgaaatca cctacgccga ttactttgcc
     2041 tgtgccgccg gtttggcaac ggcgctcatc gagatgggcg tcaaaggtga acgagtggtt
     2101 gtgcttaaaa gcaactctat tgtaacttcc gt
//
LOCUS       DASCNL010000480         3968 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001007476, whole genome shotgun sequence.
ACCESSION   DASCNL010000480 DASCNL010000000
VERSION     DASCNL010000480.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3968)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3968)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3968
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001007476"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(198..452)
                     /locus_tag="QF359_06505"
     CDS             complement(198..452)
                     /locus_tag="QF359_06505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86596.1"
                     /translation="MKICAFVITVFGTLPVLLAAVTVFVTSPVAAQGLANNGAPVVCD
                     ERNTTVFLLSDVYKESRNSIGSPIAEGSLKYFHRLTALGP"
     gene            891..1577
                     /locus_tag="QF359_06510"
     CDS             891..1577
                     /locus_tag="QF359_06510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018980784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HJO86597.1"
                     /translation="MNKIDKNYSVPALERPKLTAPNGETNILLHSCCAPCAGDVMAEL
                     TRSDIEYTILFYNPNIHPLKEYEIRKDENKRYADKLGVSFVDLDYNKEDWFDRVEGYE
                     HEPERGYRCTLCFDMRFERSALFAAENGFKVFASSLGTSRWKNLEQINGCGERAASRY
                     DDLTYWTFNWRKKGGANRMIDVSKQEKFYQQEYCGCAYSLRDTNQSRVERGLAPIKLG
                     VKIYGDEAAD"
     gene            complement(1681..2307)
                     /locus_tag="QF359_06515"
     CDS             complement(1681..2307)
                     /locus_tag="QF359_06515"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO86598.1"
                     /translation="MTTFVLIHGAWHGGWVWRKVDAPLRAAGHRVFTPTLTGLGERAH
                     LASLDVDLDTHIQDIVGLLEAEELTDVLLVGHSYAGIVITGVADKAAERLRGLVYIDA
                     FVPDSDFSLQANNPSRFEMFAKLVDDEGDDIMILPADANMWSVEDEDDVDWLNRRMTP
                     QPINTYRQKLTYTVHLEDVGNVTYIYAAGNISMRPVISLDNLINMPAC"
     gene            2475..3086
                     /locus_tag="QF359_06520"
     CDS             2475..3086
                     /locus_tag="QF359_06520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86599.1"
                     /translation="MIRLAFAIQLALIAGPAMIYGLDLSAAEKPMRHGSHHQMKKPSM
                     SAACVPKLHITDEAEKKPGGAHYKGSVVAHHNDHEKQMMQMKGAHMDHSPRQGGSFFM
                     APDKMHHLEGVYSAKCGLRLFFYNAFTQPIRADRFKAFIRIVPQKEDEPEVLRFLEPS
                     KDGSILQATIGGDVSPPFDIEALVKFPQSDEPQLFTIKVPSKK"
     gene            complement(3103..3186)
                     /locus_tag="QF359_06525"
                     /pseudo
     CDS             complement(3103..3186)
                     /locus_tag="QF359_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565695.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
     gene            complement(3364..3906)
                     /locus_tag="QF359_06530"
                     /pseudo
     CDS             complement(3364..3906)
                     /locus_tag="QF359_06530"
                     /inference="COORDINATES: protein motif:HMM:TIGR04085.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
BASE COUNT         1076 a          977 c          920 g          995 t
ORIGIN      
        1 cggatatata atgagaggaa cttcttaagg attggttttc accagatacc taacaaaaaa
       61 tcagccttgc aaaatgtctc agcgcgtcaa attgttaaat tctctcagtt aaattctctg
      121 actgattttc tgcgtaacgt tttcccaatt ccggccggca gcgacgaggc aggaaatacc
      181 atctggccgc gtaatgatca tggaccaaga gccgtcagcc gatgaaaata cttcaacgac
      241 ccttccgcta ttggcgaacc gattgaattc cgggattcct tgtagacatc ggaaagcaaa
      301 aaaacggtgg tgttgcgttc atcacagaca acgggtgcac cgttattggc aagaccctgg
      361 gcagcaaccg gactggtgac aaaaacggtg acggcggcca gtaataccgg caaggtgccg
      421 aaaacggtga taacaaaggc gcatattttc atcagtttca tcatgcttga acgataatta
      481 cttcagcgct gtttatcagg aaatattttg tgaggaatta ctacaaatgg agtccaaaca
      541 ttgccaagac caaaggcagc gcggataaaa gactgaaaat acatcaaaaa ttcagatata
      601 tttaagccta tgtttaagta ttaattgcaa ttcagttaat taactttatg agcatcgtaa
      661 tttagcagta tattagaatt aactgattaa tatataattt tgataactta ttgttaaaca
      721 tagttaaatt gtattttatt ttttagtttt ttactttttt tagaaaacaa agggtgcctg
      781 caattttagg caaagccttg tttatccctc aaatcaaacg tatatagctg cagaattact
      841 cataaaggtt ggatcacttt ttacatttgt aataaaatgc gacgctaaaa atgaataaaa
      901 tagataaaaa ctatagcgtg ccggccctgg aacggccaaa acttaccgct ccgaacggtg
      961 agaccaatat tttactgcat tcatgctgcg cgccttgtgc cggcgatgtg atggcggaat
     1021 taacgcgctc tgatattgag tacacgatct tgttctataa tccgaacatt cacccgctca
     1081 aagaatatga gattcgcaaa gacgagaata aacgttatgc cgataagctg ggcgtgtcct
     1141 ttgtcgacct cgactacaac aaagaggatt ggtttgatag agtcgagggc tatgaacatg
     1201 agcccgaacg cggctatcgc tgcacgctct gctttgatat gcggttcgag cgttcagcgc
     1261 tttttgccgc agaaaacggt ttcaaggtat ttgcatcttc actcggcacc tcgcggtgga
     1321 agaatctcga gcaaataaac ggctgcggtg agcgggcggc ttcacgctat gacgatctca
     1381 cctattggac gtttaattgg cgcaaaaaag gcggcgccaa ccggatgatc gacgtttcca
     1441 aacaggaaaa gttttatcag caggaatatt gcggctgtgc ctatagcctc agagacacca
     1501 atcaaagccg ggttgaacgt ggcctggcgc caatcaagct cggcgtaaag atctacggtg
     1561 acgaagcggc tgattaattc ctggcaactt cagatagtat ctcaaccagt ttatccggcc
     1621 tgtcgaccat cacttcatgg ccgcaatcga cgctgtaata ctgctaggca ggatcaacac
     1681 ttaacatgcc ggcatattta tcaaattgtc caagcttatt accggccgca tagatatatt
     1741 accggctgca tagatatagg tgacattgcc gacgtcctcc aagtggaccg tataggtgag
     1801 tttttgccgg taggtgttga tcggttgcgg cgtcatgcgc cggttgagcc aatcgacatc
     1861 gtcctcatcc tccaccgacc acatattggc atcagccggc agtatcatga tgtcatcgcc
     1921 ctcgtcgtcg acgagcttgg cgaacatctc aaaccggctc gggttattgg cttgcagaga
     1981 aaagtcgcta tccggcacaa aagcgtcaat atagaccagc ccccgcagac gctctgcggc
     2041 tttatcggcg accccggtaa tcactatgcc agcatagcta tgaccgacca gcaggacatc
     2101 agttaattcc tcggcttcca gcaatccgac aatatcctga atatgcgtat cgagatcgac
     2161 atcaagcgag gcgagatggg cgcgttcgcc aagcccggtt aaagtcggcg taaacacccg
     2221 gtgacctgcg gcccgtagcg gcgcatcaac tttccgccaa acccaaccgc catgccaggc
     2281 accatgaatg agtacaaatg ttgtcataat aagtctcctg aactctcatc tacattgcac
     2341 tataagataa ggtatcgaaa gactgatgag gaaataatct ttaaagcggc ctctcatcaa
     2401 cgcggcatga tttcaagtcc agcgtgtgat agactattta actcaggcaa aaacaattta
     2461 actgggaaac aataatgata cgcctagcgt ttgcaattca actggcactc attgccggac
     2521 cagcaatgat ttacggcctt gatttgtccg ccgccgagaa accgatgcgg cacggctctc
     2581 accaccaaat gaaaaaacct tctatgtctg cagcctgcgt gccaaaactg catattaccg
     2641 atgaagcaga aaaaaaacct ggcggcgccc actacaaagg ctcagtcgtg gcccatcaca
     2701 atgaccatga aaaacagatg atgcagatga aaggcgccca tatggatcat tcgccgcgcc
     2761 aaggcggcag cttttttatg gcgccggata aaatgcatca tcttgaaggg gtttattccg
     2821 ctaaatgcgg cctgcggctg tttttctaca atgccttcac ccagcccatt cgcgctgatc
     2881 gttttaaagc cttcattcgt attgtcccgc aaaaagagga tgagccggaa gttttgcgct
     2941 ttctcgagcc ctcaaaagac ggctcgattc tacaagccac aattggcggt gatgtgtccc
     3001 cgcctttcga cattgaagct ttggttaaat ttcctcaaag cgacgagccg cagcttttta
     3061 ctattaaagt accgtctaaa aagtaagcgc tttttccggg agctatccgg caccacagca
     3121 ttttttatac ttcttgccgc tgccgcaggg gcaggggtca ttgcggccga cctgcggtac
     3181 aggcttgttc tcgctggccc gcaagctttc cataactttc gccgccggtt gcctggcctt
     3241 tctaagttcc gcaattttct caagataggg ccgggcatgg agatagaaat gccggtaacc
     3301 agcgcagaga taattcagcc cttcttcgcc gtcgggcgtc ccgataaacc ggtctttggg
     3361 acaaccgccg ttgcaggagc tgaggacatc gcattcccgg caatattggg gtaaagcatc
     3421 tcgtttatca ttgccgaatt tttccaactc ccggctgttg atcatctcac ccaatggcgt
     3481 ttccaggata ttaccgagcc ggttgtccgg attaacgaaa tgatcacagg agtaaaaatc
     3541 tccgctatgt tcgacaacca cgacctgacc gcaggtctcc cgcaacatgc atagtgaatg
     3601 ttcaagccca atataaggcc tgagcgcctc ctcgaaattc tgtatcgtga tcttgccgat
     3661 atcgtgatgc acccactcgt caaaaatcgc gctgagaaat tcgccataaa gcttcggcgg
     3721 cacggattcg tcctggacgt cattttcgcc gcgccggtta accagcggca gaaattgtag
     3781 atagacggcg ccgagttcct taaagaaacg gtagaccgtc gccggctggc ggacatttcg
     3841 ttcattgatg acacagagca aatcgcaatg aatgcgaaat ttcttaaata gacggtaagc
     3901 gtgcatgact tgtttgtggg tcgcttcagc ctttttggtt acccggtagt gattgtgcac
     3961 atcgctgg
//
LOCUS       DASCNL010000481         1780 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001008992, whole genome shotgun sequence.
ACCESSION   DASCNL010000481 DASCNL010000000
VERSION     DASCNL010000481.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001008992"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            72..>1780
                     /gene="mutL"
                     /locus_tag="QF359_06535"
     CDS             72..>1780
                     /gene="mutL"
                     /locus_tag="QF359_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HJO86600.1"
                     /translation="MTIRLLPSTTVNRIAAGEVVERPASAIKELVENSIDASAKRIDV
                     IIRDGGRTFMSVTDDGCGMSPEELTLAVERHATSKLPDDDLENIHTLGFRGEALPSIG
                     SVSRMSITSRIEGADSAWMVAIEGGKKSEPAPAAFGLGTIIEVRELFYATPARLKFLK
                     TPKTENSHALDAIKRLAMAHPSIAFTVGDGSRTTLKLPRSQGDMLSARLDRLDAIMGN
                     EFATNALAINAEREDLHLSGHIGLPTLNRGNAALQFLFVNGRPVKDKLLFGTVRGVYR
                     DFISHDRHPLLALFLDIPAESLDVNVHPAKTEVRFRDAGLVRGLIVSALRHALAEAGH
                     RASTSVSNQALGAMRPETSSPQSYQGNYSANQNRPGAPSAGLREAAHEFQTPLNNLDG
                     SLSVKEVTAEQIKEVADDWPLGVARAQLHETYIVAQTDNGIVIVDQHAAHERLVYEDM
                     KKALAEDGIKRQGLLIPEVIEMDEGAADRIAARKDEFAELGLVVEAFGPGAIVVRETP
                     AMLGEINIHGLINDLADDLAENDEALSLKERLADVSAAMACHGSVRAGRHLNGDEMNA
                     LLR"
BASE COUNT          410 a          469 c          501 g          400 t
ORIGIN      
        1 gcctttgacc aacccgctgt cgaagaagga aaaatccggg ctaaaagttt tctcagcggc
       61 gagcccggct gatgacgatc cgcttgctgc catcgaccac cgtcaaccgc atcgccgccg
      121 gtgaagttgt tgaacggccc gcctcggcga tcaaggaact ggttgaaaac agtatcgatg
      181 ccagtgccaa gcgtattgat gtgattatcc gggatggcgg ccggacgttt atgtccgtca
      241 ccgacgatgg ctgcggcatg agcccggaag aattgacctt agcggttgag cgtcacgcca
      301 cctcgaaatt accggatgat gatctggaaa acattcacac gctcgggttt agaggtgagg
      361 cgctgccctc tatcggctcg gtcagccgga tgagtatcac tagccgaatt gaaggagccg
      421 acagtgcctg gatggttgcc attgaaggcg gtaaaaaatc agaacccgcc ccggcagcgt
      481 ttggcctagg cacaattata gaggtacgtg aactatttta tgctacacca gcacggttga
      541 aatttcttaa aacacccaaa actgaaaatt ctcatgccct agatgcaatc aagcggcttg
      601 ccatggcgca tccctctatt gctttcaccg tcggggatgg ctcccgcacc acgttgaagc
      661 tgccacgatc ccaaggcgac atgctcagcg cgcggctcga ccggctcgat gcaattatgg
      721 gcaatgagtt tgccaccaat gcgctcgcca tcaacgccga acgggaagac ctgcatctca
      781 gtggccatat cggtctgccg accctcaatc gcggcaatgc ggctttgcag tttttgttcg
      841 ttaatggccg cccggtgaaa gacaaattgt tgtttggcac agtcagaggg gtctatcgcg
      901 attttatctc tcatgaccgt caccctttgc tggcgctgtt tttggatatt ccggctgaaa
      961 gcctcgacgt taacgttcat ccggccaaaa ccgaagtacg gtttcgcgac gcaggcttgg
     1021 tgcgcggtct tatcgtctcg gcgctgcgtc atgctcttgc cgaagctggc caccgcgcat
     1081 caacaagcgt cagtaatcag gcgcttggtg cgatgcgacc tgagacatct agtccacaaa
     1141 gctatcaagg taactatagt gctaatcaga acagaccggg tgcaccatct gcggggctcc
     1201 gcgaagccgc ccacgagttt cagacaccgc tgaacaatct cgatggcagc ttgtcggtca
     1261 aggaagtgac ggctgaacag atcaaagaag ttgctgatga ttggccgctc ggtgttgccc
     1321 gtgctcaatt gcatgaaact tacattgttg ctcagactga caatggtatt gttattgtcg
     1381 atcagcacgc tgcccatgag cggctggtct atgaagatat gaaaaaagcg ctcgccgaag
     1441 atggcatcaa acgccaaggc ctgctcatcc cggaagtgat tgaaatggat gagggggctg
     1501 ctgaccgaat tgccgcccgg aaagatgaat ttgccgagct tgggttggtc gtcgaagcct
     1561 ttggccctgg tgccattgtt gtgcgtgaaa caccggcaat gctgggcgag attaatattc
     1621 acggtctaat caatgacctc gccgatgatc tggcggaaaa tgatgaagct ttgagcctca
     1681 aggagcgctt ggccgatgtt tcagccgcca tggcgtgcca tggttcagtg cgggcgggca
     1741 ggcatcttaa tggggacgaa atgaacgcgc tgttgcggca
//
LOCUS       DASCNL010000482         2991 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001009569, whole genome shotgun sequence.
ACCESSION   DASCNL010000482 DASCNL010000000
VERSION     DASCNL010000482.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001009569"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            474..698
                     /locus_tag="QF359_06540"
     CDS             474..698
                     /locus_tag="QF359_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86601.1"
                     /translation="MLNQVRAWINLLTDIGLSLIGLGIVLGVLIGNNLPFVGNVVDNL
                     TALISSLGSAGLVGLIALGVIIWLLRSRSA"
     gene            732..965
                     /locus_tag="QF359_06545"
     CDS             732..965
                     /locus_tag="QF359_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86602.1"
                     /translation="MEKFELLRRALWFLVEIFSLGLVLLIFVYFLLGQSAGEFIVGLI
                     GNIGVFAKATGENAIIAILIIISLVLYLNNKQR"
     gene            1059..2639
                     /gene="gpmI"
                     /locus_tag="QF359_06550"
     CDS             1059..2639
                     /gene="gpmI"
                     /locus_tag="QF359_06550"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HJO86603.1"
                     /translation="MNKIDKEASDTRRSVVLCILDGWGERESAADNAIHHAKTPNWDR
                     MSEIYPKAQLEASALDVGLPAGQMGNSEVGHMNLGAGRVVMQNLPLIDKSIADDTLKD
                     VPALIEFIAKLKKSGGACHLLGLVSPGGVHSHQNHLLALAEILDGEGITTKLHAFMDG
                     RDIAQSGGKGFMTEIVDKSSAQRNFTIATVMGRYYAMDRDNNWDRVVQAYQAIVEAKA
                     AKAEDAVAAIQASYDAGKTDEFILPVVIGNYDGIKDGDAVLMFNFRSDRARAIMASLT
                     DPEFDGFKRPREFKLVAQAGLTEYSTHLNQYMTALFPQRKLENILGEVVSDAGLTQLR
                     TAETEKYAHVTFFFNGGEEQVFPGEERILIPSPKVATYDLQPEMSAPEVTDNLVAAIE
                     AEKFDLIIVNYANGDMVGHTGVMEAAVKAIEAVDICLGRLETALKSVGGTMLITADHG
                     NAEQMIDPDNHAPHTAHTLSPVPLILVNPPGFAQDLRAGVLADVSPTLLRLLSLDQPA
                     EMTGQSLISEKQTQDAPV"
     gene            2626..>2991
                     /locus_tag="QF359_06555"
     CDS             2626..>2991
                     /locus_tag="QF359_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86604.1"
                     /translation="MPRFSWHCLFSPLIVSAALYLSVPSLAQQKDNALDNQIKEVEKE
                     IEAGKKQSRQLKQQVDELKIDISKVSRDRIGVATVVQNLEQRLSKLETEIDDLNDAET
                     EKRKLLESRRDQFSGVLMAL"
BASE COUNT          812 a          667 c          699 g          813 t
ORIGIN      
        1 ctgatgtgta tattgctttg attcttaaag cagaatcagc caaaaaaatt agcaatatga
       61 caacctatct agaaattagg gattcagact atttctggct tgaatttttg cctacactta
      121 gagtttaagt taaagtttac agaatactta taccattaaa caatctgata gaattgataa
      181 ttaatattga aaaaactgat taaatatccg tttttaagac cttaaattca cttaaatacc
      241 gggtgtaaaa gcccgttaaa attcctaagc aaagcattaa tagccaccat tttttgccct
      301 ctttggagat gcaattcact aaaaattgag catgtttttt actcattaag cattattttt
      361 aattgtaaaa aaagaatctg tgctatatat gcgctcccgt atctataatt tcactacata
      421 tggtatatgg gacggaagac agttataact gaaactatta ggagactttg actatgttaa
      481 atcaagttag ggcctggatt aatttactta ccgatattgg tttgtcatta atcggactag
      541 gtatcgtatt aggagttctt attggtaaca atcttccttt tgtcggcaac gtagtcgaca
      601 acttaaccgc actcatcagc agtcttggta gtgcagggtt ggttggatta attgctctcg
      661 gcgttattat ctggttgctc aggagcagat ccgcatagcc gtattttcca aaatacagga
      721 cgaggtcaat tatggagaaa tttgaattat tgagacgggc cttgtggttt cttgttgaaa
      781 tattcagtct cggcctcgtc ctgcttattt tcgtttattt tttgctcggt cagtccgctg
      841 gcgaatttat cgttggcttg attggcaata tcggagtgtt tgccaaagca accggtgaaa
      901 acgctatcat cgccatcttg atcatcatct ctctggtgct ttacctgaat aataagcagc
      961 ggtgatgatt tgatctacgg atagcggtag atatccgtac ccttaaaatc ctccaactct
     1021 cccattgcat ataatctcta gttttgcgac atatgcatat gaataagatc gacaaagaag
     1081 caagcgacac gcggcggtcg gtggtgctct gcattctcga tggctggggt gaacgcgaat
     1141 cagcagcgga taacgcaatc catcatgcta agacccccaa ttgggaccgc atgtcggaga
     1201 tttatcccaa agcccaactt gaagcttcgg cccttgatgt cggcctgcct gccgggcaaa
     1261 tgggcaattc agaagttggt cacatgaatc tcggtgcagg ccgcgtcgtc atgcagaatt
     1321 taccgctgat tgataaatca atcgccgatg acacgctcaa agacgtccct gctctcatcg
     1381 agtttatcgc caagctcaag aaaagtggcg gtgcctgtca tttgctcggc ctcgtttctc
     1441 cgggtggcgt gcactcccac cagaatcatt tgcttgcact tgcagaaata ttggatggcg
     1501 aaggcattac caccaagctc catgccttta tggatggtcg ggatatcgca caatccggcg
     1561 gcaaaggctt tatgacagag attgtcgata aaagctcggc gcaacgtaac tttaccatcg
     1621 ccaccgtgat ggggcgctac tatgcgatgg accgggacaa taattgggat cgggtggtgc
     1681 aggcctacca ggcaattgtt gaagcaaaag ccgccaaggc agaggatgcg gttgccgcca
     1741 tccaggccag ctacgacgca ggcaaaaccg atgaatttat actgccggtt gtcattggta
     1801 actatgacgg tatcaaagat ggtgatgcgg tgctgatgtt taacttccgc tcggaccgcg
     1861 cacgcgcgat tatggcgagc ttaactgatc cagagtttga tggtttcaag cgaccgcgtg
     1921 agtttaagct tgtagcccaa gctggcctga ctgaatattc aacccatctc aatcagtata
     1981 tgacggcact gtttccgcag cggaaactgg agaatattct aggcgaagtc gtctcagatg
     2041 ccgggctgac ccagcttcgt acagctgaga ccgaaaaata tgcgcatgtc accttctttt
     2101 tcaacggcgg tgaagaacaa gtatttcccg gtgaagagcg tattctgata ccctctccta
     2161 aagtcgctac ttatgatttg cagccggaga tgtcggcgcc agaagtgacc gataatctag
     2221 tggcggctat tgaggcggag aaatttgatc tcattattgt caattatgcc aatggcgata
     2281 tggttggaca caccggagtt atggaagctg ctgtcaaagc catcgaagct gttgatattt
     2341 gcctgggccg gcttgaaact gcactcaaaa gcgttggtgg aacaatgttg attaccgccg
     2401 atcatggcaa cgccgaacaa atgatcgatc ccgacaacca cgccccccac acagcacata
     2461 cgctgtcacc ggtgccgctg atcctggtga acccaccggg ttttgcccaa gatttaagag
     2521 ccggtgtttt agctgatgtc tcgccgacat tattgcggct attgagcttg gaccaacccg
     2581 ctgaaatgac cgggcagtca ttgatttcag aaaaacagac tcaagatgcc ccggtttagt
     2641 tggcattgct tattctctcc tctcatcgtt agcgccgcat tatacctgtc tgtcccaagc
     2701 ctcgctcaac aaaaagacaa tgctctcgac aaccagatca aggaggttga aaaagagatt
     2761 gaagccggaa aaaaacaaag ccggcagctg aaacaacaag ttgatgaatt gaaaattgat
     2821 atttcgaaag tcagccgtga tcgcattggc gtcgccactg tggtgcaaaa tcttgagcag
     2881 cgtttgtcga agctcgaaac tgaaatagat gatcttaatg atgcagaaac agagaagcgt
     2941 aaattactcg aatcgcgtcg tgaccagttc tctggggtct taatggcatt g
//
LOCUS       DASCNL010000483         1953 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001010582, whole genome shotgun sequence.
ACCESSION   DASCNL010000483 DASCNL010000000
VERSION     DASCNL010000483.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1953)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1953)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001010582"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="QF359_06560"
     CDS             <1..780
                     /locus_tag="QF359_06560"
                     /inference="COORDINATES: protein motif:HMM:NF039581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJO86605.1"
                     /translation="EIIKVSTKRGYDVRQATMIGGGGGGPVHAGFIAERLNIPSVVIP
                     SAASLYSAFGMYAMDIGEDYARSHVRRVDAAELGEIAALYQEMEEEALVAFGNISIDK
                     NLVKFRRTIDMRYIGQFHEVEVDVEDGEFTGESLSNAAEGFGTKHFELFTFQMPWKGV
                     ELLTLRVKATTPNAPFKLPEIPSGGPNAGAAKKLIRQCYFGDEFIDVQVYDGSKLTAD
                     NEIPGPAIIEETTTTVVVPENYDCLVNANKNYVLARKGESS"
     gene            777..>1953
                     /locus_tag="QF359_06565"
     CDS             777..>1953
                     /locus_tag="QF359_06565"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO86606.1"
                     /translation="MRKLKLDSTTISTIWHSMQTATKEMRYIIDRTCQNMLISQLHDV
                     SCGLWGADGSTIAVPVGLPVQFLGGEFPVRDLVAKYPDDMAPGDVFLSNDPYHGGHAN
                     HLPDWAFFRPIFYEGELLFFTMTRAHQQDTGGSFPGGYFPNGHDIHAEGICIPPTRVV
                     KAGVEQTEIFELIWNNVRFAEGVKIDNYAMIASTKVCEERVTDLLDTFGRDTVLACVE
                     EMFDRTERAVRAEIAKIPDGEYTAEAATDDDGTTLDEHVWIRVKVTIDGDQMTIDFED
                     SDKQRTGFVNCVYAATYGCASGAAIMTFDPALSDYHNAGTMRAIDIKAPLGSVVNCEY
                     PATVGASPVNMGNQIMEAVLDALSKARPDRAIAAWGKHRGDYTFGVDPRTNERYVRTS
                     "
BASE COUNT          475 a          478 c          538 g          462 t
ORIGIN      
        1 gagatcatca aggtttcgac caaacggggc tacgatgtcc gtcaggcaac catgattggc
       61 ggcggcggtg gcgggccggt tcatgccggc tttatcgctg aacgtttgaa tattccatcg
      121 gtggttatcc cttctgcagc atcgctttat agtgccttcg gcatgtacgc gatggatatc
      181 ggcgaggact atgcccgctc acatgtacgc cgggttgatg ccgctgaact aggtgaaatc
      241 gcagcgcttt atcaggaaat ggaagaagaa gctttggtcg cgttcggaaa tattagcatc
      301 gataaaaatc tcgtcaaatt tcgccgcacc atcgatatgc gctatattgg ccaattccat
      361 gaagttgaag ttgatgtcga ggatggcgaa ttcaccggcg agagcttaag caatgctgcc
      421 gagggctttg gcaccaagca ttttgagctt ttcacctttc agatgccgtg gaaaggcgtt
      481 gaattgctga ctctccgggt taaggcgaca acacccaacg cgcctttcaa attaccagaa
      541 attccaagtg gtgggcctaa tgcaggggcg gctaaaaaac tgatccggca atgttatttt
      601 ggtgacgaat ttattgatgt tcaggtctat gatggcagca aacttaccgc tgacaatgaa
      661 atacctgggc cggcgatcat tgaggaaacg acgacaaccg tagttgttcc ggaaaactat
      721 gactgcctgg tgaatgccaa taagaactac gtgctggccc ggaaaggaga aagctcatga
      781 gaaaattaaa acttgattcg acgacaatct cgacgatttg gcattcgatg caaacggcga
      841 ccaaagagat gcgctatatc atcgaccgaa cctgtcagaa catgctgatc agtcagttgc
      901 atgatgtgtc ctgcgggctc tggggcgccg atggctccac catcgccgta cccgtaggac
      961 tgccggttca attcctcggt ggtgaattcc cggtgaggga tttggtggca aaatatccgg
     1021 atgatatggc cccgggagat gtctttttat cgaacgatcc ctatcatggc ggccacgcca
     1081 accatctgcc agattgggca tttttccgac cgatttttta tgagggcgaa ctgctgttct
     1141 ttaccatgac ccgggcccat caacaggata ccggcggctc atttccaggc ggttatttcc
     1201 cgaacggcca tgacattcac gccgaaggga tttgcatccc accaacccgc gtggttaagg
     1261 ccggcgtcga gcaaaccgaa attttcgaac tgatttggaa caatgtgcgc tttgccgaag
     1321 gcgtcaagat tgacaactac gccatgatcg cctcgaccaa agtatgcgaa gaacgggtga
     1381 ccgatctgtt ggacactttt ggccgtgata cggtgctggc ttgcgtcgaa gaaatgttcg
     1441 accgcactga acgagctgta cgggcagaga tcgctaaaat tccggatggt gagtacaccg
     1501 ccgaagccgc caccgatgac gacggcacca ctttggatga acatgtctgg atcagagtca
     1561 aagtcactat cgacggtgat caaatgacta tcgattttga ggattccgac aaacagcgca
     1621 ccggatttgt caattgcgtc tatgcggcga cctatggctg tgccagtggc gcagctatta
     1681 tgacctttga tccagcactg tccgattatc ataatgccgg gaccatgcgg gcaatcgata
     1741 tcaaggcgcc gttgggttcg gtggtaaact gcgaatatcc ggcaacggtt ggtgcttcgc
     1801 cggtcaacat gggtaatcaa attatggaag cggtgctgga tgcgctttcc aaggcaagac
     1861 cggaccgggc gattgcggct tggggcaaac atcggggtga ctatactttc ggcgttgatc
     1921 cccgcaccaa cgagcgctat gtgcggactt cgt
//
LOCUS       DASCNL010000484         1417 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001011019, whole genome shotgun sequence.
ACCESSION   DASCNL010000484 DASCNL010000000
VERSION     DASCNL010000484.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1417)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001011019"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="QF359_06570"
     CDS             complement(<1..292)
                     /locus_tag="QF359_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HJO86607.1"
                     /translation="MPKRAIVLFNLGGPDKPAAIQPFLFNLFNDPAIISQPQPLRWFI
                     ANLISKRRAPITQKIYAEIGGKSPLLDFTREQAVALEDRLDGETEVFISMRYW"
     gene            complement(292..1320)
                     /gene="hemE"
                     /locus_tag="QF359_06575"
     CDS             complement(292..1320)
                     /gene="hemE"
                     /locus_tag="QF359_06575"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HJO86608.1"
                     /translation="MLVTLNGQKTTTPPLWLMRQAGRHLKEYLEIREKAKNFLEFCYT
                     PDLAVEATLQPIRRYGFDAAILFSDILVIPDALGQQVEFVPGTGPKLEAISSFDELEK
                     LSKDDLHDHLSPVYEAIGKICCELPEETILIGFAGAPWTIATYVVEGGGSKNYLKTRK
                     WAYDAPDEFGVLIDILVDATADHLIRQIESGVEVVQLFDSWAGVLPPSQFVKWSIEPA
                     KKIITRIRAKHPDIPIIGFPRGAGLLYQRFVQETGVNAISIDATVPVTWAAKNLQPYC
                     AVQGNLDNLALLTGGPAMEAEVAHILAAFADGPFIFNLGHGILPETPVPHVKKLIELV
                     RGTSVGAA"
BASE COUNT          395 a          321 c          316 g          385 t
ORIGIN      
        1 gccaatagcg cattgaaata aaaacttccg tttcgccgtc aagccggtct tcgagtgcga
       61 cggcttgttc gcgagtgaaa tcaagcaatg gtgatttgcc gccaatctcg gcgtaaattt
      121 tttgtgtaat aggggctcgt cgctttgaaa ttaaattagc aataaaccaa cgcaacggtt
      181 gtggctggct gatgatggcc gggtcattaa acagattaaa cagaaaaggc tgtatcgccg
      241 ccggtttatc cggcccacca agattaaata aaacgatggc acgcttcggc attaagccgc
      301 tccaactgat gttccacgaa caagttcaat cagttttttg acatgcggca ccggggtctc
      361 cggtaatatt ccgtggccga gattaaaaat aaatggacca tcggcaaaag ctgccagaat
      421 atgagcgacc tccgcttcca tcgccggacc accagtcaat aaagctaaat tatctagatt
      481 cccctgcacg gcgcaatacg gttgcagatt tttggcggcc caagtgaccg gcacggtcgc
      541 atcaatagaa atcgcattaa caccggtttc ctgaacaaaa cgttgataaa gcagtccggc
      601 gccgcgggga aaaccgatga tcgggatatc aggatgttta gcgcgaatac gggtaatgat
      661 ttttttagct ggttcaatcg accatttaac aaattggctt ggtggtaaaa caccggccca
      721 actatcaaac aattgaacca cctcaacacc actttcgatc tgccgtataa gatgatcagc
      781 tgttgcatca actaaaatat cgatcaacac cccaaattcg tcaggtgcgt cataagccca
      841 ttttctggtt tttagataat tcttactacc tcccccctct acgacatagg ttgcgatggt
      901 ccaaggagct ccagcaaagc cgataagaat agtttcttcc ggtaactcac agcaaatttt
      961 tccaatcgct tcatagaccg ggctcagatg atcatggaga tcatccttac ttaacttttc
     1021 taattcatca aaggatgaaa ttgcttcgag tttaggaccc gtgcctggta caaattcgac
     1081 ttgttgaccg agagcgtctg ggataaccaa gatatctgaa aataagattg ctgcatcgaa
     1141 accgtaacgg cggatcggct gtaaggtagc ctcaacggca aggtcgggag tgtagcaaaa
     1201 ttcaagaaaa tttttagcct tttccctgat ttcaagatat tctttaagat gtcgtccggc
     1261 ttggcgcata agccaaagag gcggcgtggt agttttctgg ccattgaggg ttacgagcat
     1321 tttttttgta attttttttt ggtttggtgt gaccattagt gatgtgcttt caattgataa
     1381 ttatttcaag ttatcccagg aatctactac tatatat
//
LOCUS       DASCNL010000485         2906 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001013302, whole genome shotgun sequence.
ACCESSION   DASCNL010000485 DASCNL010000000
VERSION     DASCNL010000485.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001013302"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..626)
                     /locus_tag="QF359_06580"
     CDS             complement(<1..626)
                     /locus_tag="QF359_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HJO86609.1"
                     /translation="MSKERIEGSFVALITPFNKDGSIDFEGFRTLLDFHENNSTSAVL
                     IMGSTGEVSMLSPEERHQIVSKTLKHKTGKMLFYYGCTGPHTQATIDYVAHAAKEGAD
                     GAIIAAPAYICASNEDIVQYFLEIADASDIPIGIYNNPPRVKTDLTTADIVRLAEHPN
                     IVVNKESTTRVGQVAQLCAAKPDLSLMCCCSPNLGLVVPLMALGGHGTA"
     gene            complement(814..>2906)
                     /locus_tag="QF359_06585"
     CDS             complement(814..>2906)
                     /locus_tag="QF359_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO86610.1"
                     /translation="VGHTKIVHNPDSWEGWFWGAMHHWGNSMRLGLSEGYSTVEDLLV
                     NAYMVVFWSSDPESTSGVYGGQEGTIRRGWLKRLGVKVVHIDPYFNHTAAFLGGKWLA
                     PKPGTDAALALAIAYVWITEDFYDKDFVANRTVGFDVWKDYILGLEDDVPKTPEWQEA
                     ETGISAHVVRALAREWGSKKTYLGAGGLGMGWGGACRNANGIRWARAMVCLLAMQGFG
                     KPGVNMGNLQWGTPLDLSFWFPGYGDGGISGDLQNTALAIQLYQRMPQLPTANTSLQK
                     IPRVQLPEAILNGKVEGYPRDGLSLEGQFAKIKYPAPAHSPIKMLYKYGGSNLSTMPN
                     ANRYIDMYRSPNLEFVVNQSIWMEGEAKFADVILPACTSFERWDISEWSGFGGYGHHG
                     QTQVNHRVITLQHKCIEPLGESKSDFDIFVEISKRLGLSAYFSEGMSELDWAKRMFDA
                     SDLPTITSWRKFRQKGYAVIAAPPPTERPPVAFNWFYEGRKKDVPEPYPSPSEYNEEF
                     LHGLQTPSGKFEFECNSLKVFDSDDLERPPILKYAAPREGPGSSNFDKFPLQLVSPHP
                     RYSFHTQGDGKDSFINDIQDHRVLIDGHYYLVLRLNTQDAEERGIRRHDLVRIYNDRG
                     SVICAAELTERINPGVIHGYESSAVYDRVDDSENAPERGGCLNLLTPERSQIKQAEAM
                     APSLCLVEVEAWIE"
BASE COUNT          677 a          776 c          736 g          717 t
ORIGIN      
        1 gccgtgccat gtccgccgag ggccattaac ggcaccacca ggccgaggtt gggggaacag
       61 caacacatca gcgacagatc cggcttggct gcgcacagtt gagcgacctg gccgacccgg
      121 gtcgtcgatt ccttattgac gacgatgttg ggatgttcag caagacggac gatatcagcc
      181 gtcgtcagat cggttttcac tcgcggcggg ttgttgtaaa tgccaatcgg aatatcgctg
      241 gcatcggcga tttccagaaa atactgcacg atatcttcgt tggaggcgca gatataggcc
      301 ggggcagcga taatggcacc gtcggcacct tccttggcgg catgggctac ataatcaata
      361 gttgcttggg tatgcgggcc ggtgcagccg taataaaaaa gcatcttacc ggttttgtgt
      421 tttagagttt ttgacacgat ttggtgacgt tcctcagggc ttagcataga gacctcgcca
      481 gttgagccca taatcagaac tgcgctggtg ctgttattct catgaaaatc caacagcgtc
      541 cggaagccct caaaatcaat cgatccgtct ttgttaaacg gcgtgatcaa ggcaacaaat
      601 gatccttcaa tacgttcttt tgacatcgta tttttctccc gttctagagc ctcaattttc
      661 gtgacgcaat taagcgcata atgtcattgg tgccgccacc aatcaatggg aagtaataat
      721 ctcttaggca gcgctgttcc gggtattcca ttgtcaggcc cgtggcggca atctagattg
      781 tattgttcga agaattttgg gtcgttaaga aatttactca atccaggctt cgacctcaac
      841 caaacaaagg ctaggggcca tcgcttcagc ttgcttaatt tgtgatcgtt ccggtgttaa
      901 tagattcagg caccccccgc gctctggcgc attctcagaa tcgtcaaccc ggtcgtagac
      961 tgccgaggat tcgtaaccgt ggatcacacc tggattaatt cgctcggtga gttcagccgc
     1021 acagattacc gacccccggt cgttatatat tcgaaccaga tcgtgccgtc ttatgccgcg
     1081 ttcctcggca tcctgagtat tcaatcttag aaccaagtaa tagtgaccat ctatcagaac
     1141 ccggtgatcc tggatatcat tgatgaagct gtccttgccg tcgccttggg tgtggaagct
     1201 atagcgcgga tgaggcgaaa ccaattgcaa cgggaatttg tcgaaattag agcttccagg
     1261 cccttcccta ggcgcagcat atttgaggat aggcggcctt tccagatcat ctgaatcaaa
     1321 caccttaaga gagttgcatt cgaactcaaa ttttcctgat ggtgtttgta aaccgtgcag
     1381 aaattcttcg ttatattccg acggcgaagg gtaaggttca ggcacatctt tcttgcggcc
     1441 ttcgtagaac caattgaaag ccactggcgg acgttccgta ggcggcggcg cggcgatgac
     1501 ggcataacct ttctgacgga actttctcca tgaagttatt gtcggcaagt cagacgcgtc
     1561 aaacatccgt ttagcccagt ctagctcgct catgccttcc gaaaaataag cgctgaggcc
     1621 gagccgcttt gaaatttcta caaaaatgtc aaaatccgac ttcgactcgc caagcggttc
     1681 gatgcattta tgttgcagcg tgataacccg atggttaact tgtgtttgtc cgtggtggcc
     1741 gtagccgccg aaaccactcc actcgctaat atcccagcgt tcgaaactgg tgcaggctgg
     1801 cagaataaca tcagcgaatt tagcttcacc ctccatccag atcgactggt tgacaacaaa
     1861 ttcaagattg ggtgagcggt acatgtcaat gtaacggttg gcgttgggca tagtgctcaa
     1921 gtttgatccg ccgtatttat aaagcatttt gatcggtgaa tgggcgggcg ccggatactt
     1981 gattttagcg aactggccct ctagcgaaag gccatcccga gggtaaccct cgacctttcc
     2041 gtttaagatc gcttccggca attggactcg cggaatcttc tgcaatgacg tgttggcggt
     2101 cggcagttgc ggcatacgct ggtagagttg gatcgccagc gccgtgttct gcaagtcacc
     2161 tgatatgccg ccgtcgccgt aacctgggaa ccagaaggaa agatcaagcg gagttcccca
     2221 ctgtagatta cccatgttga cacctggctt gccgaaccct tgcatggcaa gcaggcaaac
     2281 catggcgcgc gcccaacgaa taccattggc gtttcggcag gcgccgcccc agcccattcc
     2341 caaaccaccg gctccgaggt aggtcttctt ggagccccat tcccgggcca gggcccgcac
     2401 cacatgggcg ctgattccgg tttccgcctc ttgccactcg ggcgttttag gaacgtcgtc
     2461 ttccagacct aaaatataat ccttccagac gtcaaacccg acggttcgat tagcaacaaa
     2521 atccttgtcg taaaaatcct ccgtgatcca aacataggcg atagccagtg ctagcgctgc
     2581 atcggtccct ggttttggcg ccagccattt accgccgaga aaagcagccg tgtgattgaa
     2641 atagggatca atatgaacga ctttgacacc gagccttttc aaccacccac ggcggatcgt
     2701 accttcctgt ccgccgtata caccggatgt ggattcgggg tcgcttgacc aaaatactac
     2761 catatatgca ttgacgagca agtcctccac ggtgctgtag ccttcgctaa ggccaagtcg
     2821 catagaattt ccccaatggt gcatggctcc ccagaaccac ccctcccaac tgtccgggtt
     2881 gtggacgatc ttggtgtggc cgacta
//
LOCUS       DASCNL010000486         1375 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001013384, whole genome shotgun sequence.
ACCESSION   DASCNL010000486 DASCNL010000000
VERSION     DASCNL010000486.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1375)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1375)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001013384"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /gene="mobB"
                     /locus_tag="QF359_06590"
     CDS             <1..415
                     /gene="mobB"
                     /locus_tag="QF359_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HJO86611.1"
                     /translation="TVSTMKHAHHKFDIDVPGKDSYEHRQAGASEVMISASQRWALMH
                     EVGDIDEPSVDELIAHMSPVDLLLVEGFKWHSHLKMEIHRPSIGKPLLQKDDPEIIAV
                     ASDEALAGLSVPMLDLNDVDGIADFILDRCSLKAT"
     gene            417..>1375
                     /locus_tag="QF359_06595"
     CDS             417..>1375
                     /locus_tag="QF359_06595"
                     /inference="COORDINATES: protein motif:HMM:NF015418.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HJO86612.1"
                     /translation="MSELDDCFRASEEPITVAEAIARFSEILGGIGQSEKVPVREALD
                     RILASELTAQHDIPPHDNSAVDGYAVYYDDLTKGAEARLPVTGRIAAGHPLNRPAKRG
                     EAVQIFTGAPVPEGDGDDGPDTIFMVEDIKVDGDNVVLPAGIKQHANHRKKGEDVKMG
                     EVILTPGHKLRPQDISMAASLGYGEIEVCRRLRVAVFSTGDEIQDVGAPLVAGCIYDA
                     NRYSIISMLERLGCDVTDVGIFPDVPGDIRAGLWQAADDHDLLITSGGVSKGEEDHIK
                     AIVEDLGALNFWNLAIKPGRPIALGHIEREGVQVPFVGLPGNPV"
BASE COUNT          317 a          346 c          393 g          319 t
ORIGIN      
        1 gacggtatca acaatgaagc acgctcatca taagtttgat atcgatgtgc cgggcaaaga
       61 ttcctatgaa catcgccaag ccggcgccag cgaggtcatg atttccgcct ctcaaagatg
      121 ggcgctcatg catgaagtcg gagacataga cgaacccagt gtggacgagt tgatcgcgca
      181 catgtcacca gtcgatctct tgctggtcga aggttttaaa tggcactccc atctcaaaat
      241 ggaaatccac cggccctcga tcggcaagcc tttgctgcaa aaggatgacc cggaaataat
      301 cgctgtcgcc agcgatgaag ctttggccgg attgtcagtg ccaatgctag atttaaacga
      361 tgttgatggg atcgccgatt ttattcttga tcgttgtagt ttaaaggcga cctgacatga
      421 gcgaattgga cgattgcttt agagcctcag aggaaccgat taccgtcgcc gaggcgattg
      481 cgcgcttttc ggaaattctc ggtggtatcg gccaatccga aaaagtaccg gtgcgggaag
      541 ctttggaccg catcctggca agcgaactta ctgcccagca tgatattccc ccacatgata
      601 attcggctgt cgacggctat gcggtttatt acgacgatct cactaagggc gctgaagcca
      661 gattgccggt taccggcagg attgccgccg gccatccgtt aaaccggccc gccaagcgcg
      721 gtgaggcggt gcaaatattt accggtgcac ccgttcccga aggcgacggg gatgatggcc
      781 cggataccat ctttatggtc gaagacatca aagttgatgg tgataacgtc gtattgccgg
      841 ccggcataaa acaacacgcc aaccaccgaa aaaagggcga agacgtaaag atgggtgagg
      901 ttattctaac tcccggccac aagctgcggc cgcaggatat ctcgatggcg gcttcgctgg
      961 gctacggtga aattgaggtt tgccgccgtt tgcgggttgc ggttttttcg actggtgatg
     1021 agattcaaga tgttggcgcg cccttggtag cgggctgtat ctatgatgcc aaccgctatt
     1081 cgattatttc aatgctcgaa agactgggct gtgatgttac cgatgtcggc attttcccgg
     1141 atgtgcccgg tgatatccgg gctggcctct ggcaggcagc cgatgatcac gatctcctga
     1201 taacctcggg cggcgtctcc aaaggggaag aagatcacat caaagccatt gttgaagatc
     1261 tcggcgcgct gaatttttgg aatttggcga ttaagcccgg ccgccccatc gcccttggcc
     1321 atatcgaacg ggaaggggtg caggtgccgt ttgtcggtct gcccggaaat ccggt
//
LOCUS       DASCNL010000487         1204 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001015683, whole genome shotgun sequence.
ACCESSION   DASCNL010000487 DASCNL010000000
VERSION     DASCNL010000487.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1204)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1204
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001015683"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..870
                     /locus_tag="QF359_06600"
     CDS             <1..870
                     /locus_tag="QF359_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO86613.1"
                     /translation="GSTTMATQCAAEVLGLDISRFQSLTSDSKFTPKDNGSYSSRVTY
                     MVGNASIDAAINLKNILIEAAAKKLEAKPEDIECLGEVYRAGTQDEGLTFNEVVKAAL
                     EGTGTITVKGNFDTLPESWGTKKYRGGAISGSMAYAYAAQVVEVSIDPDTFEITVDKV
                     WAAQDVGKALNPLSVEGQIEGSVWMGMGQAISESTQFVNGLGITNSMLDYKVPTIIES
                     PPIEVGIIESVDPHGPFGAKEAGETSLVCFIPALTNAIYDALGVRPLDLPVTPDRLME
                     LVENSTTNKEAAE"
     gene            870..>1204
                     /locus_tag="QF359_06605"
     CDS             870..>1204
                     /locus_tag="QF359_06605"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO86614.1"
                     /translation="MEYMPNFQLHRPATAKEAVKLRSDNSAAQYVAGGTDLIVNVRRG
                     IEQPENLIDLSAIAELKLINEDKDGLHIGAGVTLKEVARNKKIVSKYQAVAEAAAAVA
                     GIIHQQYGTL"
BASE COUNT          337 a          294 c          309 g          264 t
ORIGIN      
        1 ggctcaacaa ctatggcgac ccaatgtgcg gctgaagtgc tcggcctcga tatatcccgc
       61 tttcaaagcc ttaccagcga cagcaaattt acgccgaaag acaacggctc ctattcgtcg
      121 cgtgttactt atatggttgg taatgcttca atagatgcgg cgatcaatct caaaaatatt
      181 ctgattgaag cggccgccaa aaaattagaa gccaaaccgg aagatatcga atgcttaggc
      241 gaggtttatc gcgctggcac gcaggacgaa gggttgacct ttaatgaggt tgtcaaagca
      301 gccctcgaag gcaccggcac catcacggtc aaaggtaact tcgatacgct accggaatcc
      361 tggggcacca aaaaataccg cggcggtgcg atcagcggca gcatggcgta tgcttatgcg
      421 gcgcaggtag ttgaagtcag catcgatccc gatacctttg aaattaccgt tgacaaagtc
      481 tgggctgcac aggatgtcgg caaagcactc aacccactta gcgttgaagg ccagattgaa
      541 ggctcggtct ggatgggtat gggccaagca atttcggaaa gtacccaatt tgtcaacgga
      601 ctcggtatta ccaatagtat gctggactac aaagtgccga caattattga atctccaccg
      661 atcgaggttg gtatcatcga gagtgttgat ccgcatgggc cgtttggcgc caaagaagcc
      721 ggggaaacgt ccttggtatg ttttatcccc gcattaacaa acgctattta cgatgccctt
      781 ggagtgcggc cactggattt gccagtgaca ccggatcgcc tgatggaact tgtcgaaaac
      841 agcactacca acaaagaggc agctgaataa tggaatatat gccaaacttt caacttcacc
      901 gcccggcaac cgccaaagag gcggtaaaac tgcggagtga taattcagct gcacaatacg
      961 tcgctggtgg cactgattta attgtcaatg tccggcgcgg tatcgaacag ccggaaaatc
     1021 tgattgatct cagcgctatc gcagagctta aattaattaa cgaagataaa gacggtctgc
     1081 atattggcgc cggtgtaacc ctcaaggaag tcgccagaaa taagaaaatc gtcagtaaat
     1141 atcaggcggt cgcagaagct gctgctgccg tggccggcat aatccaccag caatatggca
     1201 ccct
//
LOCUS       DASCNL010000488         1299 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001016963, whole genome shotgun sequence.
ACCESSION   DASCNL010000488 DASCNL010000000
VERSION     DASCNL010000488.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001016963"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..972)
                     /locus_tag="QF359_06610"
     CDS             complement(<1..972)
                     /locus_tag="QF359_06610"
                     /inference="COORDINATES: protein motif:HMM:NF013714.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJO86615.1"
                     /translation="MSNIVTALQSKFDNTTVLTDLQDMAKYVTDWPGKLTGKALAVAR
                     PSSTEEVAAVVKLALGHGTPIVPQSGNTGVAGGSVPDDSGAAIVLSLERMNKIRDISP
                     SAMTMTVEAGCVLETLHETVEAQNLFFPLNFGAKGSCMIGGNLATNAGGQNVLRYGNT
                     RELCLGIEAVLPDGRIVNLLSGLRKDNTGYDLRDLFIGSEGTLGVITAATMKLFHLPK
                     ARATSFAVVPDISHGLELLNRAQAETGGAVEAFELIPRVFMEIIQEYAPQHNIPFDKI
                     PDLCVLIEIATTSDTEAVADADGVVPIFSKLEKILANGFEDGIVQDAV"
BASE COUNT          335 a          353 c          286 g          325 t
ORIGIN      
        1 caccgcatcc tgcacaatgc catcctcgaa tccgttggcg aggatttttt caagcttaga
       61 gaatataggc acgacaccat cagcatccgc aaccgcttca gtatcagagg tcgtggcaat
      121 ttcgatcagc acgcatagat caggaatttt atcaaaggga atattatgtt gcggtgcata
      181 ttcctgaatg atttccataa atacacgcgg aataagttca aaggcctcga ccgctccacc
      241 ggtttcggct tgcgcacgat tgagtaattc caacccatgt gagatatccg gcacgacagc
      301 aaagctagtc gctcgagctt tcggcaaatg aaacaacttc atcgttgccg ccgtgataac
      361 gccgagtgta ccttctgagc cgataaacaa atcgcgcaga tcatagccgg tattatcttt
      421 ccgtaatcca gacagcagat ttacaatccg gccatccggc agcacggctt caatgccaag
      481 gcaaagttcc cgtgtattac cgtagcgcaa gacattctga ccaccggcat tggtcgccag
      541 attgccgcca atcatgcagc tccccttggc gccaaagtta agtggaaaaa ataaattctg
      601 cgcttcaact gtctcatgca aggtttcgag cacgcagcca gcctctaccg tcatggtcat
      661 tgccgatggg ctaatgtcac ggattttatt catgcgctcc aaggacaaca caatagctgc
      721 accgctgtca tccgggaccg agccgccagc tacgccagta ttgccgctct gcggtacaat
      781 tggcgtgccg tgtccaagcg ccaatttgac tacagccgca acttcctctg tgctggacgg
      841 gcgtgctacc gccaacgctt taccggtaag tttaccaggc caatcggtaa cgtatttcgc
      901 catgtcctga agatcagtaa gtacggtcgt gttatcaaac tttgactgca aagcagtaac
      961 aatattactc attttttatt gcctttattc cgccgccatc cagttaacct caacccgttc
     1021 cgtaataccc tgttctgcat agaggcgctg cagccctgat atttccaaga cctgcatttt
     1081 ttcatttaat gttcctccaa aacggaattt taggcagcaa ttccaggcga agtaaacctt
     1141 tcggttggtt gattgatatt cggcctgcga gtagattaga aagatgacca tctatcaggg
     1201 ctatgattta gcggcactcg acatccagta cgatatcgaa gcaaccgtcg acgacctcga
     1261 cagctaccgt attgagtacg atgcgctttc cgaaaaagt
//
LOCUS       DASCNL010000489         1569 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001019273, whole genome shotgun sequence.
ACCESSION   DASCNL010000489 DASCNL010000000
VERSION     DASCNL010000489.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001019273"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..674
                     /locus_tag="QF359_06615"
     CDS             <1..674
                     /locus_tag="QF359_06615"
                     /inference="COORDINATES: protein motif:HMM:NF012410.3"
                     /note="molecular chaperone; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HJO86616.1"
                     /translation="LEDYVGRMNEGQEEIFYISGDDAETLKSSPQIEGFKSRGVEVLL
                     MTDPIDEFWLPMVHVFNEKSFKSVTSGDIDIGKIKRSDEAGEEKEKPEAADDAAVAKL
                     LIAFKEELGDAVKDVRASDRLTDSAVCLVAGEGDMDLHLERMLKSQGHMDVPTSARVL
                     EINSTHDLIKQLSVLTDDLTRKEDLQHMAHLLLDQARIIEGEAVSDPVAFSKRLNSAL
                     AKGLV"
     gene            complement(696..1115)
                     /locus_tag="QF359_06620"
     CDS             complement(696..1115)
                     /locus_tag="QF359_06620"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJO86617.1"
                     /translation="MKIFKYNYTVMFSDCDNTQIVFYPNFFQWFDRATQNMFIEVGLP
                     WDEIWINYNIVGLPLVDASAKFIKSLRMEDEIVIESQVVEWGDKVWVLRHDVKLGDAI
                     HVEGTEKRVWGARDADAPQGFRAEPVPAEVRALLSGE"
     gene            complement(1201..>1569)
                     /locus_tag="QF359_06625"
     CDS             complement(1201..>1569)
                     /locus_tag="QF359_06625"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJO86618.1"
                     /translation="DPQCIVNYPHYFQWFDRNCERLFKDAGLGFGKLFGDYLIDGIPI
                     VEATSRFNRPARINDVLEVETWIEEWSNKTFLVKHQITREGDVIAEGQELRAWVIKDE
                     TSPGGIKAASVPEEVKQRFN"
BASE COUNT          414 a          389 c          370 g          396 t
ORIGIN      
        1 gcctggaaga ttatgtcggg cggatgaatg agggccagga agaaattttt tacatttccg
       61 gcgacgatgc cgaaacactt aaatcgtcac cccaaattga aggctttaaa tcgcgcggtg
      121 ttgaagtgct gctgatgacc gacccgattg atgaattctg gttgccaatg gtccatgtct
      181 ttaacgaaaa atcttttaaa tcagtgactt ccggcgatat cgatattggt aagatcaaac
      241 gcagtgatga agcaggtgaa gaaaaagaaa aaccggaagc cgctgatgat gcggctgtcg
      301 ccaaattgct aatcgccttt aaagaagagc tcggagatgc ggttaaggat gtccgcgcct
      361 ccgaccgtct gaccgatagt gcggtctgcc tggttgccgg tgaaggtgat atggatttac
      421 atctcgagcg catgctcaaa agccaggggc atatggatgt gccgaccagc gcccgggtgc
      481 tcgaaattaa ttcgacccac gatctaatca agcagctatc cgtcctgaca gatgatttga
      541 ccagaaaaga agaccttcag cacatggcgc atctgttgct cgatcaggcg cgtattatcg
      601 aaggtgaagc agtcagcgat ccggtcgcct tttcaaaacg cctcaatagc gctttggcga
      661 aaggtttggt ttaagagttg gtgggtagat ctgacctact ccccactcaa cagggcgcgg
      721 acttctgccg gcaccggttc ggcgcggaag ccttgcggcg cgtcggcatc acgtgcgccc
      781 cagacgcgtt tttctgtgcc ttcgacatgg atcgcatcac ccaattttac gtcatggcga
      841 agtacccaaa ccttatctcc ccattcgacg acttgacttt caatgacgat ctcatcctcc
      901 atgcggagcg acttaataaa cttcgctgac gcatcaacca gcggcaatcc aacaatatta
      961 taatttatcc aaatctcatc ccacggcagg ccaacctcaa tgaacatgtt ttgagttgct
     1021 cgatcgaacc attggaaaaa gttcggatag aaaacgattt gcgtattatc gcaatcgcta
     1081 aacatgacgg tgtaattgta tttgaatatt ttcatctgat tggaatctga ttaccggttt
     1141 ctggaggggc aagcgacacc cttttatagg cgatcacatg atcccaagcc aagaattata
     1201 ttagttaaat cgctgcttaa cttcttccgg taccgacgct gctttaatac cgccggggga
     1261 agtttcatct ttaatgaccc aggcgcgcaa ctcctgaccc tcagcgatga catcaccctc
     1321 tctggtaatt tgatgtttga ccaaaaacgt cttattcgac cactcttcga tccaggtttc
     1381 gacttccagc acatcattaa tccgggcggg ccggttgaat ctcgacgtcg cttcgacaat
     1441 tggaatgccg tcgattaagt aatctccaaa taatttgcca aatcccagcc cggcatcttt
     1501 gaacaagcgc tcacaattgc ggtcaaacca ttgaaaataa tgggggtaat tgacaataca
     1561 ttgaggatc
//
LOCUS       DASCNL010000490         1337 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001019508, whole genome shotgun sequence.
ACCESSION   DASCNL010000490 DASCNL010000000
VERSION     DASCNL010000490.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1337)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1337)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001019508"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="QF359_06630"
     CDS             <1..523
                     /locus_tag="QF359_06630"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HJO86619.1"
                     /translation="VVTGYTPNKDFDAIRLPWAQGVQAMLDGQIDVWLASTAVGSAII
                     NQFGAKKNFVLLGAGKAADSEKWQKVMIEQLLNENATIPAGIYTNQVGGNVRTTAANS
                     FILVRKNLDADLIYKMVKAMWANLDEIHNSAAVLKTLSKANPLAGVNMPLHPGAVKYY
                     KEIGFKIPARLIP"
     gene            604..>1337
                     /locus_tag="QF359_06635"
     CDS             604..>1337
                     /locus_tag="QF359_06635"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO86620.1"
                     /translation="MNNDMQAGAESDWRQNSIYLVSLVVAFVGLINSYPSYWIVPRMG
                     PFLPEIIRPVILGAATLVVILKFSFAVGWAQSRPNLKSAALALDLLLLTVITFALWRF
                     SVEMLDMLGSMVVFDGSHAAIALLASAAFTILCWRVWGAALAIVGLVTLFYYFTGPYW
                     PGIFRTAPFDILSSSAEDLWFNLGEGIVGGITAILIFTAFPFVLLGAMLERTGGAHSL
                     IKIAFLFTRRLRGGPAHAAIVASGLFG"
BASE COUNT          281 a          350 c          345 g          361 t
ORIGIN      
        1 cgttgtgacg ggttatacac cgaataaaga tttcgacgct atcagacttc cctgggcgca
       61 gggcgtacag gccatgctcg acggacagat tgatgtttgg ttggcgtcaa cggccgttgg
      121 ctccgccatc atcaaccaat ttggcgccaa gaaaaatttt gtcctgctcg gagccggcaa
      181 agcggccgac tctgaaaaat ggcagaaagt catgatcgag cagctgttaa atgagaacgc
      241 caccattccg gccggcattt acaccaatca ggtcggcggt aatgtccgga cgaccgccgc
      301 taacagcttt atcctggtgc gtaaaaacct ggatgccgat ctcatctaca aaatggtcaa
      361 agcgatgtgg gcaaatctgg atgaaattca taatagcgcc gctgttttga agactttgag
      421 caaggccaat ccactcgctg gcgttaacat gccgctgcac ccaggtgctg tgaaatatta
      481 taaagaaatc ggcttcaaaa ttcccgcccg tcttattccc tgacggctaa ccatcggatg
      541 accagggctg gcactttttt tggggccagc cctgattgtt aattccaaat ggactaaaaa
      601 agtatgaata acgacatgca ggctggtgca gaatcggact ggcgccaaaa ctcgatttac
      661 ctggtaagct tggttgtcgc ctttgtcgga ctgatcaatt cctatccgag ctactggatt
      721 gttccgagga tgggtccgtt cttgcctgag attatccggc cggtgattct cggagcggct
      781 acactcgtcg ttattttgaa gttttccttt gcggtaggct gggcacaaag ccgtcctaac
      841 ctaaaaagcg cggccttggc ccttgatctc ctgcttctca ccgtgattac atttgccttg
      901 tggcgttttt ccgtcgaaat gctggacatg ttaggttcga tggtcgtttt tgacggctcc
      961 cacgccgcca tagcactcct cgcatcggcc gccttcacta tactttgttg gcgagtctgg
     1021 ggtgcagcgc tggcgatcgt cggtctggtt acactgtttt attatttcac cggaccctat
     1081 tggcccggta tttttaggac ggcgccattc gatatattga gcagctcggc tgaagacttg
     1141 tggtttaatc tcggcgaggg cattgtcggt ggcatcaccg ctatacttat atttaccgcc
     1201 tttccatttg ttcttttggg cgccatgctt gaacgcaccg gcggtgccca ttcgctcatt
     1261 aaaatagcct tccttttcac ccgccggctg cgtggtggcc cggcccacgc agcaatcgtt
     1321 gcgtctggct tgttcgg
//
LOCUS       DASCNL010000491         3997 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001021505, whole genome shotgun sequence.
ACCESSION   DASCNL010000491 DASCNL010000000
VERSION     DASCNL010000491.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3997)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3997)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3997
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001021505"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="QF359_06640"
     CDS             <1..256
                     /locus_tag="QF359_06640"
                     /inference="COORDINATES: protein motif:HMM:NF042682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HJO86621.1"
                     /translation="PFGYLAERKTERALIRDYEKLLDDIVVGLTPDNYETTVELASLP
                     LQVRGFGYVKSRALKEAKAEEIRLLAVFRKSDVVSVQAAE"
     gene            complement(257..1030)
                     /locus_tag="QF359_06645"
     CDS             complement(257..1030)
                     /locus_tag="QF359_06645"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO86622.1"
                     /translation="MPSTNSPNIYVETGGAGETTYLLLHGQGATGNTWHNVRDIIEQE
                     KAGQWVIPDMRGHGRSDWAPSYGLGEHSTDIANLIRDRERIIIIGHSMGGIIGLALAT
                     GWFGASIAGVVVIGTIFDWTEDHTAKMHAIGGKPSRWFEARDEAIERYLKVSGLFGIV
                     PPDTPMAAAGIYQEDDKYRLAADNAVATVGGPWMELLVGVLKCPIVLAVGEHDKMVDI
                     KDYLAVDKNAVTIPNVAHNTHVEDPQATWDLVKKLDLGD"
     gene            complement(1030..1884)
                     /locus_tag="QF359_06650"
     CDS             complement(1030..1884)
                     /locus_tag="QF359_06650"
                     /inference="COORDINATES: protein motif:HMM:NF015297.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HJO86623.1"
                     /translation="MSQNANPRRSLLFVPGARLEILPKAEASRTDIICIDLEDSVADD
                     AKDAVRAEAITAVADYTSQDKTEIWLRINSIRSTEGMADIIALAESDTAPDGLMLPKI
                     SSPEEIRILRDVLSTKHSELKFHPLIETTEGLKWAYEIAKSSHKIGSLLLGGFDMSAN
                     LRVEPGWKALLYARQKLVLAAANAKVDLLDMPFFGLDNPDDLKGESQNAAEIGFTGKC
                     AIHPKQIEIINEVFSPSAEEIARAKDLISKYEAQDKAFVEIDGVLMEKPIVERLYHTL
                     AIAARINS"
     gene            1976..3112
                     /locus_tag="QF359_06655"
     CDS             1976..3112
                     /locus_tag="QF359_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJO86624.1"
                     /translation="MSNALKDILVVAVEQAVAAPYCTSRLADAGARVIKVERLGGDFA
                     RGYDDVVNGESAYFVWLNRGKESIELDIKQSDDAEILQRMIAKADVFVQNLAPGAATR
                     GGFGAKELREKYPQLITCNISGYSSDGPSCDMKAYDMLVQAETGMASITGSPDEPGRV
                     GVSVCDIAAGMYAHAAILLALMEREQTGDGKAIETSLFDGMADWMTVPLLHQDYGGKA
                     PERMGLRHPSVAPYASFETKNGELIVISIQNNREWAQFACEVLERPDLAEEGPYKDNM
                     SRVANREALEADISEVFRRYTREELSAKLLAARVAFGRVNSIEDLSNHEDLRRMELDT
                     PHGKAHIPVPPARISGEAVEAMSVPGLGEHNQALRNEFKAEGSS"
     gene            3357..>3997
                     /locus_tag="QF359_06660"
     CDS             3357..>3997
                     /locus_tag="QF359_06660"
                     /inference="COORDINATES: protein motif:HMM:NF024877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HJO86625.1"
                     /translation="MRHHSTVGKKERISALGLDREDTAEKFNDLDDVMASPSAEWKRP
                     WWVREVTKPTMDIDWDATERFDARKIQQVSWKKYVGEEKAKELGKRREEKVRQWMIEK
                     RSGYTLRDRALDIAGAQAGSVDTSFLGSWAKTAEATKNEGEMFARDASRSKLTDPARP
                     KPMSPEELGVPCYEGTPQENSRMIRSALRHFGASQVGYVELNDYTKKLIYAEDA"
BASE COUNT         1013 a          927 c         1084 g          973 t
ORIGIN      
        1 tcccttcggc tatttggcgg aacgtaaaac agaacgcgcc ttgatcaggg actacgagaa
       61 gctgttggat gatattgtcg ttggcctgac gccagacaat tacgaaacca ctgttgaatt
      121 ggcttctttg ccgttgcaag tacgtggttt tggttatgtt aaatcccgcg ctctcaagga
      181 ggccaaagcc gaagaaattc gtttgctggc ggtgtttaga aaatccgatg tggtgtcagt
      241 gcaggcggcg gagtagttag tccccaaggt ctagcttttt cactaaatcc caggtcgctt
      301 gagggtcttc gacatgagtg ttgtgagcaa catttgggat ggtgacagca tttttgtcga
      361 ccgccaggta atctttaata tcgaccattt tatcgtgttc accgacggcc aatacaatgg
      421 gacatttcag cacaccaact aacaattcca tccacggacc gccaacggtt gctaccgcat
      481 tgtctgcagc gagccggtat ttatcgtctt cttgataaat gcctgcggca gccatcggcg
      541 tgtccggtgg aacaatcccg aataagccag atactttgag atagcgttca atggcttcat
      601 cacgggcttc aaaccatcgc gaaggtttgc cgccgatggc atgcattttg gcagtgtggt
      661 cttcggtcca atcgaagatg gtgccgataa cgacgacacc agcgatgctt gctccgaacc
      721 aaccggttgc cagcgctagt ccgataatac cgcccattga atggccgata atgatgatcc
      781 gctcacggtc gcggatcagg ttggcgatat cggttgaatg ttcacctaaa ccgtaggacg
      841 gtgcccaatc ggaacggcca tgaccgcgca tatcgggaat aacccactga ccggcttttt
      901 cctgttcgat aatatcgcgg acattgtgcc aggtattgcc ggttgcgcct tgaccatgta
      961 gcagcagata ggtcgtctca cctgcaccac cggtttcaac ataaatattt ggtgaattgg
     1021 tggagggcat taagaattta tccgcgcggc gatagcaagt gtgtggtaga gccgttcaac
     1081 aatgggtttt tccattaaga cgccatcaat ctcgacaaag gctttatcct gtgcctcata
     1141 ttttgaaata aggtctttgg ctctggcaat ctcttcggcg ctcgggctga acacctcatt
     1201 gatgatttca atttgcttgg ggtggatggc gcatttgccg gtgaagccaa tctcagcagc
     1261 gttttggctt tcccctttga ggtcgtccgg attatcaagc ccgaaaaaag gcatgtccag
     1321 gagatcaact ttggcatttg cagccgccaa aaccaatttc tggcgggcgt acaaaagtgc
     1381 tttccagccg ggctctactc taagattggc cgacatatca aagccaccaa gtaaaagtga
     1441 gccaatctta tggctcgatt tggcaatctc gtaggcccat ttgaggcctt cggtggtctc
     1501 gatcaaagga tgaaatttga gctcagaatg tttagtgctg aggacatccc gcaaaatgcg
     1561 tatttcctcc ggtgacgaga tttttggcag catcaacccg tcgggggccg tatcggactc
     1621 ggcaagtgcg attatgtccg ccatgccttc ggtgctacga atagaattta tcctgagcca
     1681 aatctcagtt ttgtcttgtg aggtataatc agccacggcg gtaatcgctt cggctcgaac
     1741 agcgtctttg gcgtcatcgg cgacagagtc ttcaagatcg atacagatga tatccgtcct
     1801 gcttgcttct gcttttggca aaatctccaa tcgtgcaccg ggcacgaata acaggctacg
     1861 tcttggatta gcattttgcg acattgctaa gtctcacttt cttagataga ccatctacat
     1921 acatttctag cttagagatg gctatagtct ttgaatataa agttgagatt ctaaaatgag
     1981 taacgcgctt aaagatatcc ttgttgtcgc cgtcgaacaa gcggtggcgg ctccttattg
     2041 cacctctcgt ctggcggatg ccggggcgcg ggtgatcaag gttgagcggt tgggcggtga
     2101 ttttgcccgc ggctatgatg acgtcgtcaa cggcgaaagt gcgtattttg tatggcttaa
     2161 tcgaggtaag gaatcgattg agcttgatat taaacaatca gatgatgctg aaatactgca
     2221 acggatgatc gccaaggcgg atgtatttgt gcaaaacctc gctcccggtg cagcgacgcg
     2281 aggtggcttt ggtgccaagg aattgcgcga gaaatacccg cagctgatca cttgcaatat
     2341 ctccggttat agcagtgatg ggccatcgtg cgacatgaaa gcctacgata tgctggtgca
     2401 ggcggaaacc ggtatggcca gtatcaccgg ctcgccggat gagcctggcc gggtcggtgt
     2461 ttcggtctgt gatattgccg ccggtatgta tgcgcacgca gcgattttgc tggcgctaat
     2521 ggaaagggag caaaccggtg acggcaaggc gatagaaacg tcactgtttg atggcatggc
     2581 ggattggatg acggtaccgc tattgcatca ggattatggt ggcaaggcac ctgagcgaat
     2641 gggcctgcgt catccttccg ttgcgcccta tgcgtcgttt gaaactaaga acggcgagct
     2701 gattgtgatc tcgatccaaa acaatcggga atgggcgcag tttgcctgcg aggtcctaga
     2761 acggccagat ttggcggaag agggccccta taaagataat atgtcccggg tcgccaatcg
     2821 cgaggccttg gaagctgata taagcgaagt gttccggcgt tatacacggg aagaattatc
     2881 agcgaaacta ttggcagcgc gtgttgcttt tggccgggta aattcaattg aagacctctc
     2941 aaatcacgag gatttgcgcc gcatggagct cgatacgcca cacggcaaag cgcatatacc
     3001 ggttccaccg gcacgtatca gcggcgaggc agttgaagca atgtctgtac cgggtttggg
     3061 cgagcataac caagcgctac gcaatgaatt taaagcggaa ggttcgtcct aaattgggat
     3121 ttatacccag cagcttcaca ttaaaatgac cgttgattat agagaaagtg gactttgacc
     3181 gaaagtagca aatttgaaaa ttaacagaat accggcacac aagattatta tcgctccgca
     3241 aaacagaata aaaccggcca aaatttcgct tggcggaata tctcaagtgc aatctaaaaa
     3301 aattatcaat atagtaatac cagcaaatgg cactgcatcg gagccaggag aaaactatga
     3361 gacaccatag caccgtgggt aaaaaagaac gcataagcgc cttgggcttg gatcgcgaag
     3421 atacggctga aaaattcaat gatcttgatg acgtcatggc gtcaccctca gcggagtgga
     3481 agcggccatg gtgggtgcgt gaagttacta aaccaacaat ggatatcgat tgggatgcga
     3541 ccgagcgctt tgatgcccgg aaaatccaac aggtatcatg gaaaaaatat gtcggtgaag
     3601 agaaggccaa ggaacttggc aagcgccgcg aggaaaaggt gcgccagtgg atgatcgaaa
     3661 aaagatcggg ttataccttg cgcgaccgtg ccctcgatat tgccggtgct caggctgggt
     3721 cggtggacac cagttttttg ggatcgtggg caaaaaccgc cgaggcgacc aaaaatgaag
     3781 gtgagatgtt tgccagagat gcatcgcgct caaaattgac tgacccagcg cggcccaaac
     3841 ccatgagccc ggaagaattg ggggttccct gttatgaagg aaccccgcaa gagaattcac
     3901 gcatgatccg ctcggcgttg aggcactttg gtgcctcgca agtcggttat gtggaactga
     3961 atgattacac caaaaagctg atctatgccg aggatgc
//
LOCUS       DASCNL010000492         1095 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001023460, whole genome shotgun sequence.
ACCESSION   DASCNL010000492 DASCNL010000000
VERSION     DASCNL010000492.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001023460"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            176..>1095
                     /gene="purM"
                     /locus_tag="QF359_06665"
     CDS             176..>1095
                     /gene="purM"
                     /locus_tag="QF359_06665"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HJO86626.1"
                     /translation="MKITSASDNNEIKNGLSYKNAGVDIDAGEFLVEAIKPLAKSTDR
                     PGVASSLGGFGGLFDLKAAGFEDPILIAATDGVGTKLKIAHAVGIHNTIGIDLVAMCV
                     NDLVVQGAEPLFFLDYFATGKLDTNAATEVVKGIAEGCLQSGLALIGGETAEMPGMYA
                     PGDYDLAGFSVGAAERGALLPNGNIEAHDVVLGLASNGLHSNGFSLVRKVVEVEGLDF
                     AVPAPFDATHPLGEALLDPTRIYVRSCLAAIKSGNVKALAHITGGGLIINIPRVLTGG
                     LGVDLYAKSWDLPPVFLWLAKTSGIAPHEMA"
BASE COUNT          237 a          277 c          289 g          292 t
ORIGIN      
        1 attcgccacc agatcgcttg tttttacgtt cgtttgccac ctctctcgaa gtatgcgcgg
       61 accaccgcat tggatcattg caaaccaccc cggataaagt atgttctagc cgttcttatt
      121 tcgctaattt agcacgttag acgcttggta aaagtgtttt ggagcaaaag gggttatcaa
      181 aattacatca gccagcgaca ataatgagat aaaaaacggc ctttcgtata aaaatgccgg
      241 cgttgatatt gacgctgggg agttcctcgt cgaggccatt aagccactgg ctaagtcaac
      301 agaccggcct ggcgtcgcta gtagtctcgg tggttttggc ggtctctttg atctcaaagc
      361 agccggtttt gaagatccga ttttgattgc ggcaacagat ggtgtcggca caaaacttaa
      421 aatcgcgcat gcggtcggca ttcacaacac tatcggcatt gatctcgttg ccatgtgcgt
      481 caacgatttg gtcgtccaag gtgctgagcc gctttttttt ctcgattact tcgccactgg
      541 taagcttgat acaaatgccg ccactgaggt tgtcaaaggc atcgccgagg gttgcttgca
      601 atccggcttg gcgttaattg gtggcgagac agcagaaatg ccgggtatgt atgcacccgg
      661 tgactatgac ctcgctggct ttagtgtcgg cgccgcagag cgcggagccc tactgccaaa
      721 cggcaacatt gaggctcatg atgtggtctt aggacttgcc tccaatggct tgcattctaa
      781 tggcttctcc ctggtgcgca aggttgtcga agtcgaaggt cttgatttcg ctgtgcctgc
      841 accttttgat gccacgcacc cgcttggcga ggcgttgctt gatccgaccc ggatttatgt
      901 cagaagctgt ctggcggcga tcaagtctgg caatgtcaaa gccttagccc acatcaccgg
      961 cggtggcttg attataaata taccgcgcgt cttaactggc ggcctcggtg ttgatctata
     1021 cgccaaatca tgggatttgc cgccggtgtt cctgtggctc gctaaaacca gcggcattgc
     1081 tccccacgaa atggc
//
LOCUS       DASCNL010000493         2821 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001023983, whole genome shotgun sequence.
ACCESSION   DASCNL010000493 DASCNL010000000
VERSION     DASCNL010000493.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001023983"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1475)
                     /locus_tag="QF359_06670"
     CDS             complement(<1..1475)
                     /locus_tag="QF359_06670"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HJO86627.1"
                     /translation="MSDNTVSVDTSTTPASINFSERFNVAVPFIDRHLDEGRGNKIAI
                     RVHNGGEVTYATLAEHVNRAGNALIDLGVQKDDRVLMMVKDSAEFFYVFWGAIKAGIL
                     PVPINTLLVAKDYAYMIENSEAAGVIYSAEFSGEVMAALEKSPHKPRVALLTEGDGDT
                     LAKHMASASPDLTPLPASPEGDCFWLYSSGTTGGPKGVVHAHKDMVVTSQHYAVGILG
                     ITEADICFSAAKLFFAYGLGNGMTFPLWVGAEAVFYPGPPTPDAVHEVIETFKPTIYY
                     GVPTLYAAQLKAMENSEPDLSSIRVCTSAGEALPPDLLKRWMDKTGIPLLDGIGTTEI
                     LHIFLSNRIDNIKPGASGLAVPGYEGKIVDDEGQEVPAGETGALMIKGDSLLKLYWRN
                     LEKTADALRDGWMYTGDTYYVDEDGFFFCCGRSDDMLKVGGIWCSPVEIEGKLVEHPK
                     VLEAAIVGREDDEKLIKPEAFIVLNDAADAGEELEAELLEH"
     gene            complement(1576..>2821)
                     /gene="boxB"
                     /locus_tag="QF359_06675"
     CDS             complement(1576..>2821)
                     /gene="boxB"
                     /locus_tag="QF359_06675"
                     /EC_number="1.14.13.208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HJO86628.1"
                     /translation="SAKGWAHFDMVRMPDYRWGIFLADKEEDRKVNFGAHKGEAAWQE
                     VPGEYRAELRRLIVTQGDTEPASVEQQRALGRTCPSLYDLRSLFQVNVEEGRHLWAMV
                     YLLHAYFGRDGREEAEEMLQRHSGDVDKPRILEAFNIPTTDWLSFFCFTYFQDRDGKF
                     QLSALAESGFDPLSRTCNFMLTEEAHHMFVGETGVGRVVQRSAELVKEHDTMDIAQYG
                     GIPLALIQKWMNFHFSVCLDLFGQEKSTNAANFYNMGLKGRFQEMKIDDDHQLDNDVY
                     KVPEINGSGIIRTDTFALTAINERLRDDYRDDCQRGVDRWNKTLTGAGIDFTLTLPHQ
                     AFHRNIGTFADINVDLEGNIISPEEWDVNVGNWLPNDEDRAFVESLMVPVTEPGKLAG
                     WIAAPARGIQGKDPDFEYIKFH"
BASE COUNT          715 a          733 c          682 g          691 t
ORIGIN      
        1 cagtgctcca gtaattcggc ttctaattct tcacccgcat ctgctgcatc gttgagcacg
       61 ataaaggctt cgggtttaat cagtttctca tcatcttcgc ggccgacaat ggcagcttcg
      121 aggactttcg gatgttcgac cagcttacct tcaatctcga ccggtgagca ccagataccg
      181 ccaactttca gcatgtcatc gctgcgtccg caacagaaga agaagccatc ttcatcgacg
      241 taataagtat cgccggtata catccagcca tcgcgtaacg catcggccgt tttctccagg
      301 ttgcgccaat aaagcttgag cagtgaatca cctttaatca tcagcgcgcc ggtctcgcca
      361 gccggtactt cctggccttc atcatcaaca atttttcctt catagcccgg cacggccaag
      421 ccgctggcac ccggcttaat attgtcaatg cggtttgata ggaaaatatg gaggatttcc
      481 gttgtgccaa taccgtccag cagtggaata ccggttttat ccatccagcg ttttaaaagg
      541 tctggtggca aagcttcgcc ggccgacgtg caaacacgta ttgacgacaa atctggctcg
      601 ctgttctcca ttgcctttaa ctgggcagcg taaagcgtcg gtacaccgta ataaattgtc
      661 ggcttaaaag tctcgataac ttcatgaacc gcatccggcg ttggagggcc gggataaaag
      721 actgcctcag caccaaccca aagcgggaag gtcataccat tgcccaggcc ataggcgaaa
      781 aacaatttgg cggcagaaaa gcatatatca gcttccgtga tgcccaatat accgacggcg
      841 taatgctgac tggtgacgac catatcttta tgcgcatgga cgacaccttt tggcccaccc
      901 gtggtgccgg aagaataaag ccaaaaacaa tcaccctccg gactggcggg taagggggtt
      961 aaatcaggtg aggcagaggc catgtgctta gctaaagtat cgccgtcgcc ttctgttaat
     1021 agggcgactc taggtttgtg tggagatttc tccagcgcgg ccataacttc gccggaaaat
     1081 tccgccgaat atattacccc ggcagcttcc gaattctcaa tcatataagc gtagtcttta
     1141 gcaaccaaaa gggtattgat gggcactggg agaatgccgg ccttaatcgc accccaaaac
     1201 acataaaaaa attccgcgct gtctttaacc atcattagaa cgcgatcatc tttttgaaca
     1261 cctagatcaa taagggcgtt gccagcgcgg ttcacatgtt cagccaatgt tgcgtaagtg
     1321 acttcaccgc cattgtgcac acgaatggca attttattac cccggccttc atccaaatgc
     1381 cggtcaataa acggcacagc aacattgaat ctttcagaaa aattaatact tgctggtgtg
     1441 gtggaggtat ctacggaaac agtgttgtca gacatgcaaa actcctttta tgcggcgctt
     1501 aaaaacaatt aagccccaat cgcgaaatga taataacgca attggggctc agctgaattg
     1561 atttatatct agtttctaat ggaacttgat atattcgaaa tctgggtctt tgccttggat
     1621 accgcgcgcc ggcgccgcaa tccatccggc caatttacct ggctcggtaa caggcaccat
     1681 taagctttcg acgaaggcgc gatcttcatc gtttggcagc caattaccaa catttacatc
     1741 ccactcttct ggtgaaatga tattgccttc aagatcaaca ttaatgtcag caaaggtgcc
     1801 tatattacgg tggaaagcct ggtgcggcag ggtcagggtg aaatcgatgc cagccccggt
     1861 gagcgttttg ttccagcgat cgacgccacg ctgacagtca tcacgataat cgtcgcgcag
     1921 acgttcattg atcgccgtca aagcgaaggt atccgtgcgg ataataccgc tgccattgat
     1981 ttccggaact ttgtaaacat cgttatccaa ttgatggtca tcatcgattt tcatttcctg
     2041 gaaacgtcct ttgaggccca tattgtagaa attagccgca ttggtggatt tttcctggcc
     2101 aaacagatcg aggcagacag agaagtggaa gttcatccat ttttggatga gcgccaaagg
     2161 aatgccgcca tattgggcaa tgtccatggt gtcatgctct ttgaccagtt ccgcgctgcg
     2221 ttgaacgaca cggccaactc cagtttcgcc aacgaacata tggtgggctt cttcggtgag
     2281 catgaagttg caggttcggg ataatggatc aaagccggat tcagccagtg cgctcagctg
     2341 gaacttgcca tcccgatcct ggaaataggt gaagcagaag aacgataacc aatccgtcgt
     2401 cggaatgtta aaggcttcaa ggatgcgagg tttgtcaaca tcaccggaat ggcgttgcag
     2461 catttcctca gcttcttcgc ggccatcacg accgaaataa gcgtgcagta gataaaccat
     2521 cgcccagagg tggcggcctt cttcgacgtt tacttgaaac agactgcgca gatcataaag
     2581 cgatgggcag gtgcgaccga gtgcacgctg ctgctcaacc gaagccggtt cagtgtcgcc
     2641 ttgtgtaaca atcaggcggc gtagctcagc gcggtattcg ccgggtactt cctgccaggc
     2701 cgcttcgcct ttatgggcac cgaaattgac tttgcggtcc tcctctttat cggccaagaa
     2761 aatgccccag cggtaatccg gcatccgcac catatcaaaa tgggcccagc ctttggcgct
     2821 g
//
LOCUS       DASCNL010000494         1619 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001027102, whole genome shotgun sequence.
ACCESSION   DASCNL010000494 DASCNL010000000
VERSION     DASCNL010000494.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001027102"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="QF359_06680"
     CDS             complement(<1..362)
                     /locus_tag="QF359_06680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HJO86629.1"
                     /translation="MPSLARKGITVTMFFYLSKILWFLADPGNLLLIALCVSAGLLWT
                     RWTKAAKVVLTATAVVTVLVTILPIGPLLFGNLENRFPQVKKLPPNITGIIVLGGVVD
                     QFISDDRKQVAINGAVERL"
     gene            567..1460
                     /locus_tag="QF359_06685"
     CDS             567..1460
                     /locus_tag="QF359_06685"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO86630.1"
                     /translation="MPKENTVLKIGFIGLGIMGMPMVHNFLGANTDVTVWGRTPAKMD
                     PAVEAGATLAASPKELAKAVDIVFTCVFDADAVEELIFAENGLIEGASSDMLMVDCSS
                     IHPERARDLAARLKAANSMHFVDCPVSGGRFGARDGTLVLMAGGGDADIERLRPVVTP
                     ISQRLTHMGPVGCGQATKLVNQSIIAAEVAVMAEQFAFADTYGVQVSKIPEALAGGWA
                     DSTVLQDHAKRMIKAEYWQTAPGNMLKDMNATCDMGQQTGSPMPVTSTVTELYRFLGA
                     QGNGDKGQIGLMYLYKQDALD"
BASE COUNT          411 a          422 c          415 g          371 t
ORIGIN      
        1 agccgctcga ccgccccgtt gatggccact tgtttgcggt catcgctgat aaactggtct
       61 accacgcccc caagcacgat aataccggtg atgtttggtg gcagcttttt cacctgggga
      121 aaacgatttt ccagattacc gaacaggagc ggaccgattg gcaaaattgt tactaacaca
      181 gtgacgaccg ccgtggctgt caaaacaacc ttcgccgctt ttgtccatct ggtccaaaga
      241 agccccgccg acacacagag agcgatcagc aataaattac ccggatcagc cagaaaccac
      301 aggatcttcg acaaatagaa aaacatagtg acggtgatac ccttcctggc taatgagggc
      361 aacagtcact tcatacaaca aatgcgtcac cctggacttg atccagggtc cagcccttcc
      421 ttttactaat atctgatttt ggctatcctg gattctggcc ttcgccagta tgacaagttt
      481 atattgacca ttataattct ttgacagcca aggaatacct aggcacataa aaagacagag
      541 ctatcaagaa taagcgggga agaattatgc caaaagaaaa tactgttcta aaaattggtt
      601 ttatcggtct cggcataatg ggtatgccga tggtgcataa tttcttaggt gccaacactg
      661 acgtcacggt gtggggccgc acgcctgcaa aaatggaccc ggcggtcgaa gccggtgcga
      721 ctttagccgc ctcccctaaa gagctcgcta aagccgtcga tatcgttttc acctgtgtgt
      781 ttgatgccga tgcggttgaa gaacttatat ttgccgagaa tggcctcatt gagggtgcga
      841 gttcagacat gctgatggtt gattgctcct cgatccatcc ggagcgtgcc cgcgacttgg
      901 cagcgcggct taaagcagca aacagcatgc atttcgtcga ttgcccggtt tcgggcggtc
      961 gcttcggcgc ccgtgacggt acactggtgt taatggcggg cggtggagat gccgatattg
     1021 aacggctccg ccccgtggta acgccaattt cccaacgcct tacccatatg ggaccggtcg
     1081 gctgcggtca ggcgaccaag ttggtcaatc aatcgatcat cgccgccgaa gttgccgtta
     1141 tggcggagca gtttgctttt gccgatactt acggcgtgca ggtttcaaaa attcccgaag
     1201 cgctggccgg aggctgggct gactcgacgg tgttgcagga tcacgccaag cgcatgatta
     1261 aagcggagta ttggcagact gcccccggca atatgctgaa agatatgaat gctacctgcg
     1321 atatgggcca acaaaccggc tcaccgatgc ccgtaacatc tactgtcacc gagctttatc
     1381 gttttctcgg cgcccaaggc aatggcgaca agggtcagat cggtctgatg tatctctaca
     1441 aacaagatgc cctcgattaa ggattgatct catggtccaa aaaaataaag tgaagaaaaa
     1501 acttaaagat ctccgctccc agcgctggta tggccccaac accatgcgag gcgtcagtgc
     1561 cagggcacgt tcccggcaaa tgggattcgg cccggatgac attaataaca aacctcgga
//
LOCUS       DASCNL010000495         1093 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001027759, whole genome shotgun sequence.
ACCESSION   DASCNL010000495 DASCNL010000000
VERSION     DASCNL010000495.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1093)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1093)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001027759"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..911
                     /gene="clpX"
                     /locus_tag="QF359_06690"
     CDS             <1..911
                     /gene="clpX"
                     /locus_tag="QF359_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HJO86631.1"
                     /translation="GCGKTLLAQTLARILEVPFTMADATTLTEAGYVGEDVENIILKL
                     LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVP
                     PQGGRKHPQQEFLQVDTTDILFVCGGAFTGLDKIISARGQASSIGFGADVSSPDDRQT
                     GEILGDLEPEDLLKFGLIPEFVGRLPVLATLEELDKEALVQILTEPKNALVKQYQRLF
                     DMEEVKLNFLNAALDSVAKKAVDRKTGARGLRSIMEDILLDTMYELPDLEGVEEVVIN
                     RDVAEEGVRPLYIYADRQKDDLDNSA"
BASE COUNT          298 a          220 c          286 g          289 t
ORIGIN      
        1 ccggttgcgg caaaacgttg ctagcgcaga ctttggcgcg gatccttgaa gtgcctttca
       61 cgatggctga cgcaacgacc ttgaccgaag ccggttatgt cggtgaagat gttgaaaaca
      121 tcatcctcaa attgttgcaa gcggctgact ataatgtcga gcgcgctcaa cgcggcattg
      181 tctatattga tgaagtcgat aagatttcgc gcaaatcaga taacccatca attacccgcg
      241 atgtttcggg cgaaggtgtc caacaggcgc tgctaaaaat tatggaaggt accgttgcca
      301 gtgtgccgcc gcaaggcgga cgcaaacacc cgcaacagga gttcctgcaa gttgatacga
      361 ccgatatatt attcgtatgt ggtggggcat ttaccgggct tgataaaatt atttcagcgc
      421 gcggacaagc ttcctcaatt ggttttggtg ccgatgtcag cagtcctgac gatcgtcaaa
      481 caggcgaaat tcttggggat ttagagcctg aggatttgct taaatttggt cttattccgg
      541 aatttgttgg tcgcttaccg gttttggcta cccttgaaga actagataaa gaagcgctcg
      601 tgcaaattct gacggagcct aaaaatgcgc tggttaagca ataccaacgg ctttttgata
      661 tggaagaagt taaattgaac ttccttaatg cggcgttgga ttcggtcgct aaaaaagcgg
      721 tggatcgtaa aactggcgcg cgtggtttgc gttcgatcat ggaagatatc ttgcttgata
      781 cgatgtatga gctgcctgat ttggaaggcg ttgaagaagt ggtgatcaac cgtgacgttg
      841 ccgaagaggg agtgcgtccg ctctatatct atgccgatcg ccagaaagat gacctcgata
      901 acagcgcata acgcaataat caggtaaaaa tcgagcaaaa atgggctaaa atagggggct
      961 agtacatatt tttcgaattt caagtcttga tcttcaccta ggggattata aatcgaaaga
     1021 gtacggttat taatattgct gcatttaatc gttttggcag caaaacagga gaataaaatt
     1081 ggaatttgcc tcg
//
LOCUS       DASCNL010000496         3173 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001028836, whole genome shotgun sequence.
ACCESSION   DASCNL010000496 DASCNL010000000
VERSION     DASCNL010000496.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001028836"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1153
                     /locus_tag="QF359_06695"
     CDS             <1..1153
                     /locus_tag="QF359_06695"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HJO86632.1"
                     /translation="LGWKSATLLIERHFQEHGEYPKRLAMSAWGTANMRTGGDDIAQA
                     LALMGVQPQWDKPANRVTGFEVMPLNVLGRPRVDVVFRISGFFRDAFPAQVDLLDSAV
                     RAVSAQDESEHDNPLAAQARKDQTAFIAAGESEEDAARRSGFRVFGSKPGAYGAGLQT
                     LIDERCWETDEDLSRAYIAWGGYAYGSGAGGEAENSLFEARLKGVEVVVHNQDNREHD
                     LLDSDDYYQFEGGITAAVRELSGQQPAVYHNDHSRPDTPKIHTLNEEIGRVVRARAAN
                     PKWIEGVMRHGYKGAFEIAATVDYLFAFAATAKVVEDHHFDQLFDAYLADDKVRDFIQ
                     QNNAPALQEIADRFDEAIERGFWHPRANSVGDLLARLRQAKLGIQEEMV"
     gene            1150..1770
                     /gene="cobO"
                     /locus_tag="QF359_06700"
     CDS             1150..1770
                     /gene="cobO"
                     /locus_tag="QF359_06700"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HJO86633.1"
                     /translation="MSKNLSEEELNAQANEKRHKHKVAKDKILATKTKEGGLLVVHTG
                     KGKGKTTAAMGIVARCIGHGQKVGIVQFVKGKWETGERVVLEAFPELVTITAMGEGFT
                     WETQDRVRDIETANAAWARAKEMIEDPELVLVLLDEINIVLRNDYLDINEVADYLKNK
                     PAGKHIICTGRNAKPELIKIANLVTEMTEVKHHFRDGYKAQAGIEF"
     gene            1774..>3173
                     /locus_tag="QF359_06705"
     CDS             1774..>3173
                     /locus_tag="QF359_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HJO86634.1"
                     /translation="MPSNSLMFQGTGSDVGKSLVVAGLCRALVKRGMTVRPFKPQNMS
                     NNAAVTPDGGEIGRAQALQAKASGVAPHIDMNPVLLKPQSDVGAQLVVMGKVEGNYPA
                     RDYQTKKIELMDVVVAASERLQAEADIVLIEGAGSAAEVNLRENDIANMGFAVASQTP
                     VVLVADIDRGGVIASVVGTWELLLKEERALVAGYVINKFRGDVTLFEGGIKVIKEKTG
                     LTCFGVIPYVPKAAKLPQEDAHTLENTKREVSSGSIKIVVPRLAHISNYDDFDPLIAE
                     PDVELQFILPGDVLPGDADLVILPGSKTTITDLADLRRQGWDVDLAAHLRRGGAVLGI
                     CAGYQMLGTYIDDQEKTESEITSIEGLAHLNVHTELGGDKSLVEITADSALDCGIFKG
                     YEMHIGITAGPDCDQPFASVDGKDIGAVSQDGKVMGCYLHGLFADDDFRHGFLSRLKD
                     REISSVSYDLEVEQAL"
BASE COUNT          774 a          771 c          903 g          725 t
ORIGIN      
        1 attgggatgg aaatcagcca ccctgctgat tgagcggcat tttcaggaac atggggagta
       61 ccccaaacgc ctcgccatga gtgcctgggg cacggctaat atgcgcaccg gtggcgatga
      121 tattgcccaa gcattggcat tgatgggggt gcaaccgcaa tgggacaaac cggccaaccg
      181 ggtcactggc tttgaagtca tgccattgaa tgttttggga cggcctcgag ttgacgtggt
      241 gtttcgtata tccggttttt tccgggatgc cttcccggcg caggttgatc ttttggactc
      301 tgccgtgcgc gccgttagtg cgcaggatga atctgaacat gataatcctt tggcggccca
      361 agctcggaaa gaccagacag cgttcatagc ggctggtgag agcgaagagg atgccgcccg
      421 ccggtctggc ttccgggtgt ttggctccaa gcctggtgcc tatggggcgg ggctgcaaac
      481 cttaatcgat gagcgctgct gggaaaccga cgaagatctc tcccgcgcct atattgcctg
      541 gggtggctat gcctatggca gcggcgccgg aggggaagct gaaaacagct tgtttgaagc
      601 gcgtcttaaa ggcgttgagg tcgtcgtcca caatcaagac aaccgcgagc acgatctttt
      661 ggatagcgat gattactacc agttcgaagg cggcatcacc gcagccgtgc gcgagctttc
      721 cggtcagcag cctgccgtct atcacaatga tcatagtcgt cccgacacac ctaaaatcca
      781 caccttaaat gaagagatcg gtcgggtggt gcgggcgcgg gctgctaatc ccaagtggat
      841 tgagggcgtc atgcgccacg gttataaagg cgcctttgaa attgccgcga cggtggatta
      901 tctctttgcc tttgccgcca ccgctaaggt cgttgaagat catcacttcg atcagttgtt
      961 tgacgcttat ttggccgatg acaaagtgcg tgatttcatt caacagaata atgcgccagc
     1021 cttgcaggaa atcgctgacc ggtttgacga agcaatcgag cgaggctttt ggcatcctcg
     1081 cgccaattcg gtcggtgatt tattagcgcg tctcagacaa gccaaattgg ggattcagga
     1141 ggaaatggta tgagcaaaaa tttatcagaa gaagagctta acgctcaagc caatgaaaaa
     1201 cgccacaagc acaaagtggc caaagacaaa atcctggcga ccaagaccaa agaaggcggc
     1261 ttgctggtcg ttcataccgg caaaggcaaa ggtaaaacga cggcggcgat gggcattgtc
     1321 gcccgctgca tcggtcatgg ccaaaaagtt ggcatcgtcc aattcgttaa aggcaaatgg
     1381 gaaaccggtg agcgggtggt gctggaagcc ttccctgaac tagtgaccat caccgcaatg
     1441 ggtgagggct ttacctggga aactcaggac cgggtgcggg atattgaaac tgctaacgcg
     1501 gcctgggcgc gggccaagga aatgattgaa gacccggagc tggttctcgt gcttttagac
     1561 gagattaaca tcgtattacg caatgactat ctcgatatca atgaagttgc tgattacctc
     1621 aaaaataaac cggctgggaa acatatcatc tgcaccggtc gcaacgctaa gccggaattg
     1681 atcaaaatcg ctaatttggt gaccgaaatg accgaagtga aacaccactt ccgcgacggc
     1741 tacaaagcgc aagccgggat tgaattttag accatgcctt caaattccct catgtttcaa
     1801 ggtaccgggt ccgacgtcgg caagtcgctg gtcgtcgctg gattgtgccg agccttagta
     1861 aaacggggga tgacggtccg gccgtttaag ccgcaaaaca tgtcaaacaa tgcagccgtt
     1921 acgccggatg gtggcgagat tggccgggcg caggccttgc aagccaaagc ctcaggtgtt
     1981 gcgcctcaca tcgatatgaa cccagtgctg ttaaaaccgc aatcggatgt tggcgcgcaa
     2041 ttggtggtga tgggaaaagt cgaaggcaat tatccggcac gcgactatca gaccaaaaaa
     2101 attgaattaa tggatgtcgt tgtcgcagca tccgaacgcc tccaagccga agcagacatc
     2161 gtcctgattg aaggagcagg cagtgcggca gaagtaaatc tgcgcgagaa cgatatcgct
     2221 aatatgggct ttgccgtcgc gagccaaaca cctgttgttc tggtcgccga tattgaccgg
     2281 ggcggggtca ttgccagcgt tgtcggtacc tgggaattgc tgctcaaaga agagcgcgca
     2341 ctggtcgccg gctatgtcat caataaattt cggggtgacg ttactttgtt cgaaggcggt
     2401 attaaggtca ttaaagaaaa aactgggctc acctgttttg gtgtcatccc ttatgtgccg
     2461 aaagcagcga aattgccgca agaagatgcg catactttgg aaaacaccaa acgggaggta
     2521 tccagtggct ctatcaagat tgttgtgccc agactggctc atatttctaa ctatgatgat
     2581 tttgatcccc tgatcgccga gccggatgtt gaattgcaat ttattttgcc cggcgacgta
     2641 ttgcccgggg atgcggattt ggtcatcttg cctggctcca agaccacaat caccgattta
     2701 gccgatctac gccgccaggg ctgggacgtt gatctcgctg cccatctccg gcgtggtggt
     2761 gcagtactgg ggatttgcgc cggctatcaa atgctcggca cctatattga tgatcaggaa
     2821 aaaaccgaaa gtgaaatcac gtcgatcgag ggattggctc atctcaacgt gcatactgaa
     2881 ttgggtggtg ataaatcatt agttgaaatc acggctgact cggcgctcga ttgtggaatt
     2941 ttcaagggat atgaaatgca tatcggtatc accgcggggc ccgattgtga ccagccattt
     3001 gccagcgttg acggtaaaga catcggcgct gtttcccaag acggcaaagt gatgggctgc
     3061 tatctgcacg gactgttcgc tgatgatgac ttccgtcacg gctttttatc ccggctcaaa
     3121 gaccgggaga tttccagtgt ctcctatgac cttgaagtcg agcaagcgct tga
//
LOCUS       DASCNL010000497         1868 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001031885, whole genome shotgun sequence.
ACCESSION   DASCNL010000497 DASCNL010000000
VERSION     DASCNL010000497.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001031885"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1310)
                     /locus_tag="QF359_06710"
     CDS             complement(<1..1310)
                     /locus_tag="QF359_06710"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HJO86635.1"
                     /translation="MKTSFAKPGLPTTGIVVVSANAGSKLSATASKLNKKTGGALTRA
                     IKASNFEGKKGQSLNVMAPAGTRLDRVMVVGLGKADEVTELEMQKLGGRIYAGTKQGI
                     KGTVAIAVDAVKDVKMSAGDIAAEIAYGAQLRSYRFDKYKTKQKPNDKPKLKSITLHC
                     TRFAKARKNYTRLGKIANGVFFTRDLVSEPSNVIYPDTLAKQAKSLEKLGVKVQILGE
                     AQMRRLGMGALLGVGQGSIRESKMVVMQWQGGPKGRGKEAQPVAFVGKGVTFDTGGIS
                     IKPSAGMEDMKWDMGGAGAVIGLMKALAGRKAKANVVGVVGLVENMPGGNAQRPGDIV
                     TSMSGQTIEVLNTDAEGRLVLADALHYTNNRFKPKFMVNLATLTGAIIVSLGSHHAGL
                     FSNNDQLSERLTKAGTEVEEKLWRLPLDEAYDKMINSQAADMQN"
     gene            complement(1406..>1868)
                     /locus_tag="QF359_06715"
     CDS             complement(1406..>1868)
                     /locus_tag="QF359_06715"
                     /inference="COORDINATES: protein motif:HMM:NF015651.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HJO86636.1"
                     /translation="MLLDRLPERLQTLKLVRGLGHLAADTKKLFLSPRYALKAISLGV
                     LGNILISLVAYLTAQALAIEVSVLDCLVLIPPVILITTLPISIAGWGVREGAMVAAFA
                     FVGVTEGDAFVMSILFGLINVVFALPGGLLWLLGDYKREEVAEVEADLTDG"
BASE COUNT          446 a          527 c          455 g          440 t
ORIGIN      
        1 atattttgca tatcagccgc ttgggaatta atcattttgt cgtaagcttc gtccagcggc
       61 agacgccaga gtttctcttc cacttccgta cccgccttgg tgagacgttc cgacaattga
      121 tcattgttgg agaacagacc ggcatgatgg ctgccgagcg agacaatgat cgcgccggtc
      181 agggtcgcca gattaaccat gaatttcggt ttaaagcggt tattggtgta gtgcagcgca
      241 tcggccaaca ccagccgccc ctcagcatcg gtgtttaaga cttcaatggt ctgcccggac
      301 atcgaggtga cgatatcgcc cggccgctgg gcattaccgc ccggcatgtt ctcgaccagc
      361 ccaactacac cgacgacatt ggctttggct ttgcgaccgg caagcgcttt catcaaacca
      421 atgactgcac cagcgccgcc catatcccat ttcatatctt ccatgccagc cgatggtttg
      481 atcgaaatac cgccggtatc aaaggttacg cccttaccga cgaaagcaac cggctgggct
      541 tctttgcctc tgccttttgg tccgccctgc cattgcatga cgaccatttt cgactcgcgg
      601 atactgccct gaccgacgcc caataaggcg cccataccaa gccgccgcat ttgtgcttca
      661 ccaaggattt gcactttaac gccgagcttt tccaagctct tggcctgttt agcgagggtg
      721 tccggataga tgacgttcga gggctctgag accaaatcgc gggtaaagaa aacaccattg
      781 gcgattttac ccagacgggt ataattttta cgtgccttgg caaatctagt gcaatgcaag
      841 gtaatggatt tgagtttcgg tttatcattt ggtttttgct tggttttata tttatcgaac
      901 cggtaggagc gaagctgggc gccgtaagca atctcggcgg caatatcacc ggcactcatc
      961 ttgacatctt tgaccgcatc aaccgcaatt gccaccgtgc cttttatgcc ttgcttggtg
     1021 ccggcataaa tccggccgcc aagtttttgc atttcaagct cggtgacttc gtctgctttg
     1081 ccaagcccga cgaccataac ccggtcaagc cgcgtcccgg ccggcgccat gacgttcagc
     1141 gactggcctt ttttgccctc aaaattgctg gctttgatcg cccgcgtgag cgcaccgccg
     1201 gtttttttat tcagcttgct ggcggtggca gaaagtttgc tgccggcgtt ggcgctgaca
     1261 acaacaatac ccgttgtggg caatcctggt ttggcaaagg aagttttcat atgatcctct
     1321 taaaaaattg gctgtgcgca aataaatatt gggttgaatt tacccaacaa cgcggcaaaa
     1381 gaaagcattt gttgagctta gttgatcaac catccgttag gtcagcttca acctcggcga
     1441 cctcttcgcg cttataatca ccgagcaacc acagcaaccc gcccggcaag gcaaatacca
     1501 cattgatcaa gccgaacagg atcgacatga caaaggcatc accttcggtc acaccaacaa
     1561 aggcaaaggc agccaccatc gccccttccc gcacgcccca tccggcaata gagatcggca
     1621 aagtcgtaat caatatcacc ggtgggataa ggaccaggca gtccaggacc gagacttcaa
     1681 tcgccaaagc ttgagccgtg agataggcaa cgagagagat caaaatattg ccaagcacgc
     1741 ccaaagaaat tgccttcaac gcatagcgtg gagacaggaa taactttttg gtatcagccg
     1801 ccaagtggcc gagaccgcgc accagcttca aggtctgcag acgttcaggc aaccggtcaa
     1861 gcagcatc
//
LOCUS       DASCNL010000498         1024 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001034253, whole genome shotgun sequence.
ACCESSION   DASCNL010000498 DASCNL010000000
VERSION     DASCNL010000498.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001034253"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            7..924
                     /locus_tag="QF359_06720"
     CDS             7..924
                     /locus_tag="QF359_06720"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HJO86637.1"
                     /translation="MPHAKEKLSALDKPERIAKVIARVGLCSRREAERWIEAGRVKLD
                     GKVLESPAVTVTAARKIIVDGEPLPLKDEQKVWRYHKPAGLLTTHSDPEGRPNLFDSL
                     PEDMPRVISVGRLDLSSEGLLLLTNDGELARQLELPASGWLRRYRVRVHGRVDEKILD
                     ELINGVTIDDVHYKSIQATLDRQQGANAWLTVSLVEGKNREIRRVMEHFGWSVSRLIR
                     TAYGPFQLGKLAKGDVEKVRSKVLKDQLSGRDRSGFAAKTEKLARRPADKRTKRLQAG
                     RLKKNYRKRTKIDPINKPRKENAHRRRSK"
     gene            899..>1024
                     /locus_tag="QF359_06725"
     CDS             899..>1024
                     /locus_tag="QF359_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007705150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HJO86638.1"
                     /translation="MRIVGGRNRGRFFKAPKGQATRPTSDRTRESVFNILNSRLVD"
BASE COUNT          275 a          259 c          290 g          200 t
ORIGIN      
        1 ttatcgatgc cgcacgctaa agaaaaactc tcagcacttg ataaaccgga gcgtattgcc
       61 aaggtgattg cacgcgttgg tctttgttcg agacgcgaag ccgaacgctg gatcgaagcc
      121 ggccgcgtta agctcgacgg caaagtgcta gaaagcccgg ctgtcacggt gacggctgcc
      181 agaaaaatca ttgtcgacgg cgagccgtta ccgcttaaag acgagcaaaa agtttggcgc
      241 tatcacaagc cggccgggtt gttaacgacc cacagtgatc ccgaagggcg gccgaactta
      301 ttcgacagcc taccggaaga tatgcctcgg gtaatctcgg taggccggct tgatctcagc
      361 tcggaaggat tgctgttgct gaccaatgac ggcgaactgg cgcggcaatt agagctgccg
      421 gcaagcggct ggctccggcg ttatcgcgtc cgcgtacatg gccgggttga tgaaaaaata
      481 ctggatgagc tcatcaatgg cgtgacgatt gacgatgttc attataaatc cattcaagcc
      541 acacttgatc gccagcaagg ggccaacgcc tggctgacgg tatcactggt tgaaggtaaa
      601 aaccgggaaa tccgccgcgt gatggagcat tttggctggt cggttagccg cttaatccgt
      661 acagcttacg gtccgttcca actcggcaag ttggcaaaag gtgacgttga aaaagtgcgc
      721 agcaaagtct tgaaagatca gttgagcggc cgggatcgtt ccggctttgc cgcgaaaacg
      781 gaaaagttgg cacgccgccc tgccgacaaa cgcaccaaac ggttgcaagc tggacggctc
      841 aaaaagaact atagaaaaag aaccaagatt gatccgatca ataaaccaag aaaagaaaat
      901 gcgcatcgtc ggcggtcgaa atagagggcg ctttttcaaa gcgccgaaag ggcaagcgac
      961 gcggccaacc tcggaccgca cccgggaatc agtttttaat atcctaaact cccgcttggt
     1021 agat
//
LOCUS       DASCNL010000499         3441 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001034474, whole genome shotgun sequence.
ACCESSION   DASCNL010000499 DASCNL010000000
VERSION     DASCNL010000499.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001034474"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="QF359_06730"
     CDS             <1..191
                     /locus_tag="QF359_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJO86639.1"
                     /translation="KIAEREKDYQAQFANPFRVGARGYIDDVIMPHNTRWRIARSLRM
                     LKNKKMENPWKKHGNIPL"
     gene            188..475
                     /locus_tag="QF359_06735"
     CDS             188..475
                     /locus_tag="QF359_06735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86640.1"
                     /translation="MIRLLIIISLGLSLSGPVNAADRDTGYYYPEPKNIGSYRARVFF
                     TMMTTVVHKSRIFKLFKVDSILTFYDLAKMLGFKQISISDGDTFSHQVLLR"
     gene            485..904
                     /locus_tag="QF359_06740"
     CDS             485..904
                     /locus_tag="QF359_06740"
                     /inference="COORDINATES: protein motif:HMM:NF020457.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DOPA 4,5-dioxygenase family protein"
                     /protein_id="HJO86641.1"
                     /translation="MNFIHKTYRSETDVKNYHVHLYYDGGTKLHAANLRREIDRRFGK
                     QVQFGRWRDQAPQGPHPVSHFQVTFTTELFDVLVPFLALNRGDLHILLHPNTGNGYED
                     HTKNVMWIGPSIPLAEGWMQRNQKSMQEAAAEMAADT"
     gene            1085..1549
                     /locus_tag="QF359_06745"
     CDS             1085..1549
                     /locus_tag="QF359_06745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007397437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO86642.1"
                     /translation="MSEIDLHVNGESHTVDVEPDTPLIYVLRNHLKLTGPKLGCGQEQ
                     CGACVVLVDGKATNSCVRAVSEFASTKIVTIEGLAEGSELSPVQKAFQDEGAAQCGYC
                     TSGIIVATTALLNSNTQPSDDDIHEALHDHLCRCGSHRRVLTAISRLTEEGA"
     gene            1551..>3441
                     /locus_tag="QF359_06750"
     CDS             1551..>3441
                     /locus_tag="QF359_06750"
                     /inference="COORDINATES: protein motif:HMM:NF014758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO86643.1"
                     /translation="MATPSDKHPSIADHPDLDQWIGMGADERIILHTGKVDIGQRIST
                     ALALIAAEELDVDYDRVDVRRTETDIDPNEGFTAGSMSMQHSGKAIRMASATARRFLL
                     ARAAEKLGVDAATLAVEDGLIQSRDTNETITYWELMPDGKFDIPVDETVAVKAPEDHT
                     KVGTSVLAKGMREIVTGRMRFIHDMVLPDMLNARLVRPPHYLAELKSIDEGVIGRLAA
                     NNITVVRDGSFVAVVAADEYASVKAAGQIANAIEWDLKDGLPTGELYDSLTSNERISL
                     PVVKGGAPVDEPVLRLKNPPNEAISTASTRFEKPYQMHGSIAPSAGCALFEDGKLAVW
                     THNQGVYPLRATMAEALDMAVDDIHITYVPGSGCYGHNGADDAAFDAALIARAVPGKP
                     VLLKWTRDNEHAWEPYGSAMVCELRGSLDANGKVIDWSHESYGDTFMARPAPGRVGLP
                     AEKLLSTHYMESPLDWPVAPPTMGAHVGVHRNLEPLYTFPEPRLVKNLVRRLPLRVSA
                     LRTLGAFANVTAMESFIDELAEAADISPVEFRLIHLDNERAKEVIIALADHMKTDQAG
                     QDEGMGAGIAFSQYKNVAAYCAVGIEVEVNDEAEVKLHRAWISCDAGEVVEPDGLTAQ
                     LEGGLI"
BASE COUNT          838 a          812 c          938 g          853 t
ORIGIN      
        1 agaaaatagc tgagcgggaa aaagattatc aggcgcagtt tgctaatccg ttccgggtcg
       61 gtgcacgcgg ttatattgac gacgttatta tgccgcataa tacgcgctgg cggatcgccc
      121 gctcgctgcg catgctcaaa aataaaaaga tggaaaatcc gtggaagaag cacgggaata
      181 tacccttatg atcaggctcc tgataattat ttcacttggt ctatctttgt cggggccggt
      241 taatgcggct gaccgcgata cgggctacta ttatcccgaa cctaagaata ttgggtccta
      301 tcgggcgcga gtattcttta cgatgatgac tacggtggtt cataaatcgc ggatattcaa
      361 gctgtttaaa gttgattcaa ttttgacgtt ttatgatctg gccaagatgc ttggctttaa
      421 acaaatcagc atcagtgacg gcgatacatt ttctcatcag gtactattgc gttagaggaa
      481 ggctatgaat tttattcata aaacgtatcg ttctgaaacg gacgtaaaaa actatcatgt
      541 gcatctgtat tacgacggtg gaaccaagtt gcatgccgcc aatctgcgcc gggaaatcga
      601 ccggcgcttc ggcaagcaag tgcagttcgg tcggtggcgg gatcaagcgc cgcagggacc
      661 gcatccggta tcgcattttc aagtcacttt tacgactgag ctatttgacg ttttggtgcc
      721 gtttcttgcg cttaatcggg gcgatttgca tattctgctg catcccaaca cgggaaacgg
      781 ctatgaagat cacaccaaga atgtcatgtg gatcgggccg agcattccgc ttgctgaagg
      841 ctggatgcaa cgcaatcaaa aaagcatgca agaggccgcc gcagagatgg cagctgatac
      901 ataattttcc aaggaaataa tttatgaaac tttgtgcctg ccaggcctcg ctgtttgtcc
      961 gtaaagttcg cgttatggcg cgaccggcat tcaaatcttg cgagctggtt cgttgagttt
     1021 tccgaacggc cttcaatgca agcaacctat ttcgaaatac cgtcctagct tggggtgatc
     1081 tcaaatgtca gaaatagatc tacatgttaa tggtgaaagt catactgtcg acgttgaacc
     1141 tgacacaccc ttaatttatg tccttagaaa tcacctcaag ctcactggcc caaaactggg
     1201 ctgcggccag gaacagtgcg gtgcctgtgt tgtactggta gatggcaaag cgacaaattc
     1261 atgcgtccgg gcagtttctg aatttgcaag caccaagatt gttaccattg agggcttagc
     1321 cgaaggcagc gaattgagtc cagtgcaaaa ggctttccaa gatgagggcg cggcccaatg
     1381 cggttattgc acctcgggta taattgtcgc cacaactgct ttattaaata gtaacacgca
     1441 accgagcgac gatgatatcc acgaggcatt gcacgatcat ctttgccggt gcggctccca
     1501 ccgccgggtc ctaacggcca tcagccggtt gacggaagaa ggagcgtagc atggccactc
     1561 cttctgacaa acacccaagc atcgccgatc acccggatct tgaccaatgg atcggaatgg
     1621 gtgccgatga gcggattata ctccacaccg gtaaagttga tatcggtcag cgcatttcga
     1681 cagcactcgc gcttattgcc gccgaggagt tggatgttga ttatgaccgg gtagacgtta
     1741 ggcgcactga aactgatatt gatcccaatg aaggctttac cgctggcagt atgtcgatgc
     1801 agcattctgg taaagccatc cgtatggcca gtgcgacagc acgccgattt ctgctggctc
     1861 gtgccgctga aaaacttggt gttgatgcag cgaccttggc ggttgaagac ggcctcatac
     1921 aatcacgcga tactaatgag accattactt attgggagct tatgcctgat ggcaagtttg
     1981 acattccggt cgatgaaacg gttgccgtta aagcgcccga agaccacacc aaggttggca
     2041 ccagcgttct cgccaaaggt atgagagaga tcgtcaccgg gaggatgcgc ttcattcatg
     2101 atatggtttt accggatatg cttaatgcac gtttggtgcg gccgccgcat tatttggctg
     2161 aacttaaaag cattgatgaa ggcgtgattg gtcgtcttgc cgccaacaat ataaccgtgg
     2221 tgcgcgacgg cagttttgtt gcggttgtcg cggctgatga atatgcctcg gtcaaagccg
     2281 ctggacagat cgccaatgct atcgagtggg atttaaaaga cggtctgccc acgggcgagc
     2341 tttatgattc tctaacttcg aatgagagga tcagcctacc ggtggttaaa ggtggtgcgc
     2401 cggtggatga acctgtgctg cggttgaaaa acccaccaaa cgaagcaata tccactgcgt
     2461 caacacgctt tgaaaaacct tatcaaatgc atggctccat cgcgccatca gccggctgtg
     2521 cgctttttga ggatggtaaa ttagcggttt ggacccataa tcaaggggtc tatccgctgc
     2581 gcgcaaccat ggcggaggca ctcgatatgg cagtcgatga tatccacatt acctatgtgc
     2641 caggctccgg ttgctacggt cataatggtg ctgatgatgc cgcttttgat gcagcgctga
     2701 ttgcccgtgc ggtgccgggt aagccggtgt tactgaaatg gacccgcgat aatgaacatg
     2761 cctgggagcc ctatggctcg gcaatggtct gtgagttgcg gggtagtcta gatgccaacg
     2821 gcaaggtaat tgattggtcg catgagagtt atggtgacac ctttatggcg cgacctgcac
     2881 caggccgagt tggcttacca gccgagaaat tactatcgac acattatatg gagagcccac
     2941 ttgattggcc ggtggctccg ccaactatgg gagctcatgt tggtgtgcat cgcaatctgg
     3001 agccacttta caccttccct gagccgcggt tggtaaaaaa tctcgtccga agactgccac
     3061 tccgggtttc ggccctgcgc acccttggcg cctttgccaa tgtcacggcg atggaatctt
     3121 ttattgatga gctcgccgaa gctgctgata tttcaccggt agagtttcgc ctgatccatc
     3181 tcgacaatga gcgggccaaa gaagtgatta tagcgctggc agatcatatg aagactgatc
     3241 aagctggcca ggatgagggc atgggggcgg gcattgcctt cagccaatac aaaaatgtcg
     3301 ccgcctattg tgccgttggt atcgaggtag aggttaatga tgaggcggaa gtcaaattac
     3361 accgcgcctg gataagctgt gatgctggtg aagtcgttga gccggatggt ctgacagcac
     3421 aattggaggg tgggcttatt c
//
LOCUS       DASCNL010000500         7174 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001036990, whole genome shotgun sequence.
ACCESSION   DASCNL010000500 DASCNL010000000
VERSION     DASCNL010000500.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 7174)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7174)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7174
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001036990"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            435..1835
                     /locus_tag="QF359_06755"
     CDS             435..1835
                     /locus_tag="QF359_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HJO86644.1"
                     /translation="MRNKLPAKFSLMAGSVVAGFLTCAGAAHGQTLTEALAAAYMNNP
                     KLLAARASLRSDDEAVPQALANWRPKVELSGDVARTHTHLNTRTAGRDQLRSPRNTSL
                     DVTLPLYRGLRTNAGVTKAELDIKSARAGLLGTEQDVLLSAASAYMAVMRDQAVLDLN
                     MKNEQVLWHQLEATQDRFRVGEITRTDVSQAEARLSGASADRIQAEGNLNNSRANYLN
                     VIGEAPIKLQAPTKLGDLPTSLENAVSTAIKNHPDVVSKSFSEQAARENIKSVRGELL
                     PTLNLLGKLSRGWESTTNDSQITTGRVMLDLTVPLYQKGSVFSRLRAAKQDAGQSLLN
                     LEDSRRNARETATKAWETHETAKARINSISAQIKAAEIALEGVQREADVGSRTILDVL
                     DAEQELLDANVSLVRANRDQIITSFELRESIGRLTAKNLGLPVKIYDPTRHYKEIRSK
                     WFGSNSSDQDPVGTKK"
     gene            1979..2539
                     /locus_tag="QF359_06760"
     CDS             1979..2539
                     /locus_tag="QF359_06760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HJO86645.1"
                     /translation="MAEENKQAESSMEESLASIRRVLSEDEEAEAEAKAPAEPEPEEE
                     MDMAAAMEEMEPEPEPEPAPAPAPVATPSPAPEPEPTLNENILELTQQMIAQAPPDIG
                     AGESILSTAPSQDSTDALQELAKALLSKRDIAIGNRDMTLEGLIREIFRPLLREWLDQ
                     NLPYLIERLVKKEIDHMVNRAERLDL"
     gene            2664..5312
                     /locus_tag="QF359_06765"
     CDS             2664..5312
                     /locus_tag="QF359_06765"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HJO86646.1"
                     /translation="MLEKNYQPDLAEAKHYKAWEDSGAFKCGVNAEGKPYTIVIPPPN
                     VTGSLHMGHALNNTLQDILTRYHRMKGDDALWQPGCDHAGIATQMVVERQLEQEGKTR
                     HDLGREKFIDTVWQWKEESGGTIVGQLRRLGASCDWSRERFTMDDGLSAAVRKVFVEL
                     YKQELIYRDKRLVNWDPKLHTAISDLEVEQRESVGSMWYFKYPIEGQDGQFITVGTTR
                     PETMLGDTAVAVHPDDERYTDLVGNNVILPIAGRPIPIVADEYSDPEKGSGAVKITPA
                     HDFNDFEVGRRNDLDLINIFDRDANLNENVHDAYKGMERFAAREKIIAEMDALGLLEK
                     IEDNEMMVPYGDRSGVVIEPWLTDQWFVDAETLAQPAIKAVEEGRTKFVPKHWENTYF
                     EWMRNIQPWCVSRQIWWGHQIPAWFGPDGEIFVELTEEEAQAAADKHYGKPTEITRDE
                     DVLDTWFSSALWPFSTLGWPEETPEVARYYPTDVLVTGFDIIFFWVSRMMMMGLHFLD
                     EVPFHEVYIHALVRDEHGQKMSKSKGNVIDPLQLIDSYGADALRMTLAAHAAQGRDIK
                     LSENRVEGYRNFATKLWNAARFCEINGCKSALDFNPKNVNETLNKWIVGKVAEATGKV
                     ATGIDDYRFNEAAGGIYQFTWGTFCDWFIEFAKPILQGDDGAAKSETQATAAWVLEQL
                     LLLLHPFMPFITEELWAQMRDSKNAMLISTAWPELGDLSDAGAEAEMDWIVRLITQIR
                     SLRVELNVPASTKVPLALKNAEDVAALCVERHGELIKRLARLETLELSDAEVPEGAAQ
                     NILGTTTLVMSLTGVINVDEEKARLDKEIAKLDGEIEKIDKKLDNENFTSKAPAEVVE
                     EQKSRRTDYAKSKAKVEEALNRISQL"
     gene            5364..5522
                     /locus_tag="QF359_06770"
     CDS             5364..5522
                     /locus_tag="QF359_06770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86647.1"
                     /translation="MTRAGGLFLSEDIQRSFRDVLAGNKQIALNWDSNGTTYGKVALG
                     LKPALVCW"
     gene            complement(5539..6471)
                     /locus_tag="QF359_06775"
     CDS             complement(5539..6471)
                     /locus_tag="QF359_06775"
                     /inference="COORDINATES: protein motif:HMM:NF015431.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HJO86648.1"
                     /translation="MNTSMPHLQLKQLRQLITVAEKGSIRQAAEALSIAQPALSRSIR
                     SIEENLQVKLMNRGPRGIELNDYGKTLVNYGKIIEANLRFASEEIDELRGSKEGHVNL
                     GVGPFEIFPVAHIAIDRLLKNRPNAQVSVIQGDFDDLSARLLVGEIDIMLGPSQLNNT
                     TPGLNTDILTETRPVLVVRAEHPFANLNQVSLEILSKADWILPPADVRARPRFNNIFI
                     RHGLVPPKVSIEMAPGTASVALLKRRDLIGMLSRQQIAHEIAEGSMKILPVEHFDFAL
                     PMQLSTREFGRLSPACRDMISIIRTVCKEVAGTI"
     gene            6970..>7174
                     /locus_tag="QF359_06780"
     CDS             6970..>7174
                     /locus_tag="QF359_06780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86649.1"
                     /translation="MDGNVTDSKSTSKSSSSNAFDSGIPTREELIQRARDMAPILLER
                     APNCEEMRRAPKETIDDFKQAGFF"
BASE COUNT         1935 a         1614 c         1877 g         1748 t
ORIGIN      
        1 gcaggccaat ctggtgtagc gatggggaaa gcagtggtga tgcagaaatt tggtgctgcg
       61 gtttctagtg tcgaattgtt tgatgccgga acgccgttat tgccgggatt tagtaaagaa
      121 aaagcatttg aattttaaat ggggctgacc cagctagcgc catttaggtg ttatcatgaa
      181 ggcaatgagg aagagctaat taagacaaat aaaacagtgg gttaaactat atttaaacca
      241 gttagctggg tcagtccctt ttaaatattt aaccggtgta tttgtaaccg tttgaacaac
      301 cctcaaatgc aaggttttgg taacactttt tggataaata tatactcata ctatgtgtgg
      361 agattaattt ttttgtggtt gtggttgagt gacgtaccag atcgtcggta gattagccgc
      421 ccagaggatt gtggatgcgt aataaattac ccgctaaatt tagccttatg gccggtagcg
      481 tcgttgccgg tttcttgacg tgtgcgggag cagcacatgg tcaaacttta acggaagctc
      541 tagcggctgc ctatatgaac aacccaaaat tattagcggc gcgcgcgtct ttgcgctccg
      601 atgatgaagc tgtgccgcaa gccctggcga attggcggcc gaaagtcgaa ttgtccggcg
      661 atgttgcgcg cacgcacact catctcaaca cccgcacagc cggtagagac caattgaggt
      721 caccccgcaa tacgtcgctt gatgtcacac taccgttata tcgtggtttg agaacgaacg
      781 ccggcgttac gaaagcggaa cttgatatca aatcggcgcg tgctggttta ttgggaacag
      841 agcaggatgt gttgttaagt gcggcctcgg cctatatggc cgtcatgcgc gatcaggcgg
      901 tgcttgatct caacatgaaa aacgaacaag tgctgtggca tcaattggaa gcaactcaag
      961 accggtttcg ggttggtgaa attacgcgca ccgacgtcag tcaggcggaa gccaggctgt
     1021 caggtgcgtc agcagatcgc attcaagctg aaggcaatct caacaattca cgcgccaact
     1081 atcttaatgt catcggcgaa gcgcccatca agctgcaagc gccgacaaaa ttaggtgacc
     1141 tgccaaccag tttggagaat gccgtcagca ccgcaatcaa aaatcatcct gatgtcgtat
     1201 caaaaagttt tagtgagcaa gcggcccggg aaaatattaa atccgtgcgc ggcgaattgc
     1261 tgccaacgct gaaccttttg ggtaaattga gccggggttg ggaatcaaca accaacgata
     1321 gccaaataac aactggccgc gtgatgttgg atttaactgt gcctctttat caaaagggtt
     1381 cggttttttc tcggcttaga gcagccaagc aagatgccgg tcaaagtctg cttaatctcg
     1441 aagatagcag gcgcaatgca cgggaaacag caaccaaagc gtgggaaacc catgaaacgg
     1501 caaaagcgcg aatcaattcg atttccgccc aaattaaggc tgcagagatc gctttggagg
     1561 gtgttcagcg tgaagccgac gttgggtcac gtacgatttt ggacgtctta gatgcggaac
     1621 aggaattatt ggacgcgaat gtaagtctcg taagagcaaa tcgcgatcaa attatcacaa
     1681 gttttgaatt gcgggaatcc attggccgct taacggcaaa aaacctcgga ttaccggtaa
     1741 aaatttacga tccaaccaga cattataaag aaattcgttc caaatggttt ggctcaaata
     1801 gctctgacca agacccagtt ggcacaaaaa aatagtcaaa taattcgata cgggcgaaaa
     1861 aactgaaata attgcccggc ggtcaccagg aactgcttaa caagcaggcg gaaaaaaagt
     1921 agcgtcaaat gtagaacgtg gtattaatct gttagctaat tggaccgatg atcgagtaat
     1981 ggccgaagaa aacaaacaag ccgaatcttc aatggaagaa agcctcgcct caatcaggcg
     2041 ggtattgtcc gaagatgaag aagctgaagc ggaagcgaaa gcgccagctg agcccgaacc
     2101 ggaagaagag atggacatgg cggcagcgat ggaagaaatg gaacctgaac ctgaaccaga
     2161 acctgctccg gcacctgccc cagtggcaac accatcgcca gcgccggaac cagaaccaac
     2221 gctcaatgaa aacattcttg agttgaccca gcaaatgatt gcgcaagcac caccggatat
     2281 cggtgcgggt gaatcaatcc tttcaacggc accttcacag gattcgacgg atgccttaca
     2341 ggaactcgcc aaggctctct tgagcaagcg ggatatcgcc atcggcaacc gggatatgac
     2401 tctcgaaggt ttgatccggg aaatatttcg cccgttgctg cgcgaatggc tggatcaaaa
     2461 cttgccctat ctgatcgaac gattggtcaa gaaagagatc gatcacatgg tcaatcgggc
     2521 ggagcgcttg gatctgtaat cacctaactt taattatcag gtaatttcct aatttacacg
     2581 cggttttccc gtgatattgt gcgcgccgtt tagggagcat cgcacccgtt gttgcttagc
     2641 gccataaata atagaagttg gtaatgttag aaaaaaacta tcagcctgat ttagcggaag
     2701 ccaagcacta caaagcttgg gaagactccg gtgcgtttaa atgcggcgtt aatgccgaag
     2761 gcaagcctta taccattgtc atcccaccgc ctaatgtcac cggcagtctt catatgggcc
     2821 atgcgctcaa caacacgttg caggatattc tgacgcgcta tcaccggatg aaaggtgatg
     2881 atgcgctgtg gcagcccggc tgcgaccacg ccggcattgc aacccagatg gtggtggagc
     2941 gccagctcga acaggaaggc aaaacccgcc acgatcttgg ccgtgaaaaa ttcattgata
     3001 cggtctggca atggaaagaa gaatccggtg gcaccattgt tggtcagttg cggcgcttag
     3061 gcgcatcctg cgattggtcg cgcgaacgtt tcaccatgga tgatgggctt tctgctgctg
     3121 ttcgcaaagt ctttgttgag ctttataagc aggaattaat ctatcgcgat aagcgtttgg
     3181 tcaattggga tcccaaactg catacggcga tttctgatct ggaagtggag cagcgcgaat
     3241 ccgtcggcag catgtggtat tttaaatacc ccatcgaagg ccaagatggg cagtttataa
     3301 ctgttggtac cacccgccct gaaaccatgt tgggcgatac ggcagtggcg gtacatcctg
     3361 atgacgagcg ctacaccgat ttggttggca ataatgtcat cctgccgatt gctggccggc
     3421 ccatcccgat tgtcgccgat gaatattccg atcctgaaaa aggcagtggt gcggttaaaa
     3481 tcacaccggc gcatgacttc aatgactttg aagttggccg ccgcaatgat ctggacctga
     3541 ttaacatatt cgaccgtgac gccaatctga acgaaaatgt gcacgatgcc tataaaggca
     3601 tggaacggtt tgcggcacgc gaaaaaatca ttgctgaaat ggacgcgctc ggtctgttgg
     3661 aaaagattga agacaatgag atgatggtgc cttatggcga ccgctccggc gtggtgatcg
     3721 agccgtggct gaccgatcaa tggtttgtcg atgctgagac tttagcgcag ccggcgatca
     3781 aagcggttga agaggggcgt accaaatttg tccccaaaca ctgggagaac acctatttcg
     3841 agtggatgcg caatatccag ccgtggtgcg tttcccgcca aatctggtgg ggccatcaaa
     3901 ttcccgcttg gttcggcccg gatggtgaaa tctttgtcga gctgacagaa gaagaagcgc
     3961 aagccgccgc cgataaacac tatggtaagc cgacggaaat tacccgcgat gaagatgtgt
     4021 tggacacctg gttttcttct gcactttggc cgttttcgac gcttggctgg ccggaagaga
     4081 cgccggaggt tgcgcgctac tacccgactg atgttttggt taccggcttt gacattattt
     4141 tcttctgggt gtcccggatg atgatgatgg gtctgcactt tcttgatgaa gtgccgttcc
     4201 atgaagtcta tatccatgct ctggtacggg acgagcacgg tcagaaaatg tctaaatcaa
     4261 agggcaatgt gatcgatcca ttgcaactta tcgacagcta tggcgcagat gccttgcgta
     4321 tgacattggc agctcatgct gcccaaggcc gcgacattaa gctgtctgaa aatcgcgtcg
     4381 aaggctatcg aaattttgcc accaaattgt ggaatgcggc gcgtttttgc gagattaatg
     4441 gctgtaagtc agcgctggat ttcaacccta aaaatgtaaa cgaaactctg aataaatgga
     4501 ttgtcggtaa agttgctgag gcgaccggca aagtcgctac tggcattgat gactaccgct
     4561 ttaacgaagc cgctggcggt atctaccagt ttacttgggg tacgttttgc gactggttca
     4621 tcgagtttgc caagccgatc ctgcagggtg atgatggtgc ggcgaaatca gaaacacaag
     4681 cgactgccgc ctgggtgttg gaacaattgt tactgctgct gcaccccttt atgccgttta
     4741 tcactgagga actttgggcc caaatgagag acagcaaaaa cgctatgctg atttccactg
     4801 cctggcctga attaggtgat ctcagcgatg caggagccga agccgaaatg gactggatag
     4861 ttcgcttgat cacgcaaatc cgatcgctcc gtgttgaact gaatgttcca gccagcacta
     4921 aggtaccatt ggccttgaaa aacgctgaag atgtcgccgc actttgcgtc gagcgtcatg
     4981 gtgaattgat caagcgtttg gctcggcttg agacacttga actttctgat gccgaggtgc
     5041 cggaaggggc agcgcagaat attttaggca caacgacgtt ggtgatgtcg cttaccggtg
     5101 tgattaatgt cgatgaggaa aaagcacgtt tggataaaga gattgccaag cttgacggtg
     5161 agattgaaaa aattgacaaa aaactcgaca acgaaaactt tacctcgaag gcaccggcgg
     5221 aagttgtcga ggaacaaaaa tcgcgccgta ccgactacgc taaatccaaa gctaaagtcg
     5281 aagaagcgtt gaaccgtatt tcgcaattat aaaaattcaa attctagctc ccgagacgcg
     5341 atatagtata ctatccgata ttggtgacgc gcgccggtgg attatttcta agcgaagata
     5401 tccagcgctc tttccgtgac gttcttgccg gtaataagca aatagctctc aactgggaca
     5461 gtaacggcac cacttacggc aaggtggcgc tcggtctcaa gccagcgcta gtttgctggt
     5521 agtacgcgag aaaatatttt agatcgtgcc ggcgacttct ttacaaaccg tcctaattat
     5581 agaaatcata tctcggcagg ctggcgatag ccggccaaac tcacgggttg acagctgcat
     5641 cggcagggca aaatcaaagt gctcgacagg cagaattttc atcgagcctt cagctatttc
     5701 gtgagcgatt tgctggcgtg ataacatgcc gatcaagtca cggcgcttga ggagagcaac
     5761 tgaagcggta cctggcgcca tttcaatcga gactttgggc ggcaccaggc catggcggat
     5821 gaaaatgtta ttgaaacgcg gacgtgcccg cacatccgcc ggtggtaaaa tccaatcggc
     5881 tttcgataaa atttcaagtg aaacttgatt gagattggca aaaggatgtt cagctctaac
     5941 tacgagaacg gggcgtgttt cagtcaatat gtcggtgttc agccccggag ttgtgttgtt
     6001 caattgcgac gggccgagca tgatgtcaat ttcgccaacc agaagtctgg ctgataaatc
     6061 atcaaaatcg ccttgaatta cagatacttg agcatttggg cggtttttga gcaatcgatc
     6121 gatggcgata tgggcaacgg gaaaaatttc aaaggggccg acgcccaaat tgacgtggcc
     6181 ttccttggag ccgcgcagct cgtctatttc ttctgaggca aaccgcagat tggcttcgat
     6241 gattttgccg taattgacga gggttttgcc ataatcgttc aactcgatac cccggggtcc
     6301 ccggttcatt aattttacct gcaagttttc ttcaattgag cgaatgctgc gtgatagcgc
     6361 tggctgagca attgagaggg cttcggcggc ttgacgaata ctgcctttct cggcaacggt
     6421 gataagttga cgaagctgtt tgagctgaag atgaggcatt gaagtattca cagaacttct
     6481 cctaatttac cggtaatttt ccgaggttta actgctcacg attattatga atcactcata
     6541 gacgatttaa tggcataaca gcaacagttt cctgctgtat ttaccataat ttctgcagaa
     6601 ttatttgatt ttttggcagg attaagctga taattagata taccgtggag gcatatctcg
     6661 ggcgtaataa gtatgttaca agacgacctg agatttttag aataggccca gttagtacca
     6721 ttgaggtcaa aaacttgtgg gaccatttgg tcaccaaatc catttttgga accaacagcc
     6781 cgagggaaga ctctgtaagt tgacgctctc aaaatggggg gtatgctcgc aaaccttgtc
     6841 ggggtatgta atgtctccgg caaggttttt tttaatttta gagtttgatt taaaatttaa
     6901 cggcctgaaa aaaaattaaa ctgagaataa aatatctcag atcagggcat cacgtaggga
     6961 cttagtctaa tggacggaaa cgttacagat tctaaatcga cctctaaaag ctcaagctcg
     7021 aacgcattcg atagtggtat tccgacgcgt gaggagctca ttcagcgggc ccgtgacatg
     7081 gcgccaattc ttcttgagcg tgcacccaac tgcgaagaaa tgcgccgcgc tcctaaagaa
     7141 accattgatg attttaagca ggccggattt ttta
//
LOCUS       DASCNL010000501         1005 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001039109, whole genome shotgun sequence.
ACCESSION   DASCNL010000501 DASCNL010000000
VERSION     DASCNL010000501.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001039109"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="QF359_06785"
     CDS             complement(<1..388)
                     /locus_tag="QF359_06785"
                     /inference="COORDINATES: protein motif:HMM:NF013179.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HJO86650.1"
                     /translation="MPLNGNSSDNNTEKILNALDSSIVVIDDGGYIDYLNSAGEQFFA
                     SSLAQLKGHSINELLPPDSPLTTLIKQVQATGCGVSDYGLMLDTPRIAKQLVNVQVTP
                     LVDQLGYAILTIFERSIADKIDRQLTH"
     gene            complement(409..>1005)
                     /locus_tag="QF359_06790"
     CDS             complement(409..>1005)
                     /locus_tag="QF359_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HJO86651.1"
                     /translation="VKAVDLPVTVKMRTGWNEQNRNAPTLAKIAENSGVKMLTVHGRT
                     RNQLYKGTADWHFIGKVKAAVSIPVIGNGDVTEIEDAATLLDQSGADGIMIGRGTFGR
                     PWFLAQVDHYLKTGERLPDPELSQQYQIVTAHYDELLSYYGEERGLRTARKHIGWYSK
                     GLPGSAEFRGKFNLLDNVIGAKAALDEFYRPLLERQAA"
BASE COUNT          261 a          238 c          230 g          276 t
ORIGIN      
        1 gatgggttaa ttggcgatca attttatcgg cgattgaacg ttcaaaaatt gtcaaaatgg
       61 cgtagccgag ctgatcaacc agaggggtca cctgaacatt gaccaattgt ttagcaatgc
      121 gcggtgtatc gagcatcaag ccatagtcag agacgccgca gccggttgcc tgaacttgct
      181 tgatcaaggt tgttagcgga ctatctggcg gcagtaattc attaatgcta tgtcccttta
      241 attgcgccaa actactggca aaaaattgtt caccagcact attgagatag tcaatatagc
      301 cgccgtcatc gatcaccacg atcgaagaat cgagggcgtt taagattttc tctgtattgt
      361 tatcggaaga atttccgtta agaggcattg agttttcttt tcaattcttt aggcagcttg
      421 acgttcaagc aagggccggt aaaattcatc gagtgcagct ttggcgccta tgacattatc
      481 aaggagatta aatttaccgc ggaattctgc tgatcccggc aagcctttac tgtaccagcc
      541 gatatgctta cgggcagttc taagcccccg ttcctcgccg taataactta gcaactcgtc
      601 ataatgagcg gtcacaattt gatattgttg cgagagctca ggatcaggta agcgctcacc
      661 ggtttttaaa taatgatcca cttgggccaa gaaccatgga cgcccaaagg tgccacggcc
      721 aatcataatg ccatcggcac cggattgatc tagcaaagtt gcggcgtcct ctatttccgt
      781 aacatcgcca ttaccaatta ccggaatgct gacggccgct ttgactttgc cgatgaaatg
      841 ccaatccgct gtgcccttat aaagctgatt gcgtgtgcga ccatggacgg taagcatttt
      901 aacgccagaa ttttcagcta tttttgccaa agttggggca ttccgatttt gctcattcca
      961 accggtgcgc attttcacag taaccggcaa atccacagct tttac
//
LOCUS       DASCNL010000502         4268 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001042984, whole genome shotgun sequence.
ACCESSION   DASCNL010000502 DASCNL010000000
VERSION     DASCNL010000502.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4268)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4268)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4268
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001042984"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="QF359_06795"
     CDS             complement(<1..409)
                     /locus_tag="QF359_06795"
                     /inference="COORDINATES: protein motif:HMM:NF023568.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO86652.1"
                     /translation="MSQIKTERILDHPSICIDHAGEGEMLILMHGIGGNRTNWAEQVE
                     AFSEYFHTVAWDARGYGASDDYEGPLDFSDFARDLLRVLDHFGVAKAHIGGLSMGGRI
                     AQDFYVLYPERVKTLILISTFSGFKNFTDEEKKR"
     gene            complement(421..1920)
                     /locus_tag="QF359_06800"
     CDS             complement(421..1920)
                     /locus_tag="QF359_06800"
                     /inference="COORDINATES: protein motif:HMM:NF012363.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HJO86653.1"
                     /translation="MSCNSDLIAKTKNGAVQGFHNGRCLFFGGIPFASSTAGEAKFKP
                     PQPPKSWQGVRPAVFPGPAIYQNPTRFEPFLGPDPQPQSEDALCLNIWTPALDSDKRP
                     VYVWIHGGAYISGSASFPLYDGSSFARNGDIVFVGINYRLGERGYLHLKNLDENYAGS
                     GNNALLDHVAALKWVRDNIEAFGGDPHRVTVGGQSAGGGAITGLMMMPQARGLFHGAI
                     IQSISLMSFRDLELAEYATKTFMEAAGVPDISSLEAAPMATLLAAQRVTVRSRPPWKQ
                     ATFQPVIDGEVLTKDILPAASDGDLVDVPVLIGITSEEWKPFQFFMNPDDVPRDEETF
                     VNFFDHLVGDGGELISTYRDIVGNLEPEEIFAAAMSDWRWRGPTLDFAARLCDKQKLY
                     AYEFTWKSPTNDGRLGAGHCVEIPFCFDNLSTTSTPYLIGSAAPTVLADNMHARWCTF
                     IRNGSPNNDSTIDWPAYDKRCRATMMFDVDSQIVEDPHPERRTYWENRN"
     gene            complement(1917..2720)
                     /locus_tag="QF359_06805"
     CDS             complement(1917..2720)
                     /locus_tag="QF359_06805"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJO86654.1"
                     /translation="MAQSEQKYSPVGDLRKQRILSRITADGLVVLAIIGWWLLSLELP
                     SIIFPGPVVVAKQILTFFIDANYIGHVFTSTIRVIIAVLIAVFAGSLLAFLPRWLPVT
                     EVIVHERIKPLLNSFPSVGWAILAIIWFGPSHGTIVFIMVMILTPFCLVNVSEGLKEI
                     DLDLLEMARSFTRRRMVVLVKITLPLLMPFIISAVRIAYGVGWKIALVAELFGTESGL
                     GFLLQQGQSVADAATVFATCFAIVIIFWIGEKLVIDPLSRKFSHDRAGL"
     gene            complement(2707..3531)
                     /locus_tag="QF359_06810"
     CDS             complement(2707..3531)
                     /locus_tag="QF359_06810"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJO86655.1"
                     /translation="MPLQINAQTLRSLSSVTTQGLVPARRRARLAGHLFVLCFLGVWT
                     TYSSVVESYVMPGPWAVLSRLGLVFADVHEIKHMFYSFAHIILAVVISFIIGSAFAFL
                     AHYLATFRLMTHGRLSPFLNSFSGIGWTFLAIIWFGISDVTVVFVISMVLIPFAIINM
                     SEGLANLDEERIEMAASFTRSGWRRFKLVILPSLYPFIFATIRISFGVAWKVALTAEL
                     FGGNTGLGYMLNLARQDFDMPLVLAVIVIIIAFVYSTDRWIFAPIQARLARHHGAV"
     gene            complement(3515..>4268)
                     /locus_tag="QF359_06815"
     CDS             complement(3515..>4268)
                     /locus_tag="QF359_06815"
                     /inference="COORDINATES: protein motif:HMM:NF020650.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO86656.1"
                     /translation="MNAVMAIPFAKRRGLNLVVLSSALRSAKGRLGAGIWVKKDSPYK
                     TLTDLKGKKIGSYSLRATGTTWIRIALWKKYKVNVSYKGGDFSWVQIPAPALLSALET
                     GRVEAATLIHSQAYKALKTGNYRVLAWTNKDIRELFGLDSLSAVNVTYPDKLKARPEA
                     FKEFNRMLRESVLYALANADHVGAAIAKSTAKIEPAYFKAWINDYSFFPGAINEEDKK
                     AMTLVWTMAKDMGILKKVPDVNKVIWEHAITD"
BASE COUNT         1165 a         1122 c         1069 g          912 t
ORIGIN      
        1 agcgtttttt ttcctcatcg gtaaaatttt taaagcctga aaatgtcgag atcaatatca
       61 gggttttcac ccgttcgggg tacaagacgt aaaaatcctg agcgatccgc ccacccatcg
      121 agagtccgcc aatatgggct ttagccacac cgaaatgatc aagaacgcgc aaaaggtcac
      181 gagcgaaatc gctgaaatct agcggcccct cataatcgtc actggcacca taaccccgcg
      241 catcccaggc gaccgtgtga aaatattccg aaaacgcctc aacctgttcg gcccaattag
      301 tccggttgcc gccgatgccg tgcatgagga ttaacatctc gccttcgccg gcatggtcga
      361 tgcaaattga ggggtggtcc aaaatacgct cggtcttaat ctgggacatt tggtatctcc
      421 ttaattccga ttttcccaat aggtccgccg ttcgggatgg gggtcctcga caatttgact
      481 atccacatca aacatcatgg tcgcccgaca acgcttgtca taagccggcc aatcaatggt
      541 gctatcattg ttgggagagc cattccgaat aaaggtgcac caacgggcgt gcatgttgtc
      601 tgccaacacc gtcggtgcgg cggaaccgat caaataaggc gttgaagtgg tcgataaatt
      661 atcaaaacag aaaggtatct ccacacaatg ccccgcccca agccgaccgt cattggtcgg
      721 cgacttccag gtgaattcat aggcatagag tttctgcttg tcgcaaagcc tagccgcaaa
      781 atcgagggtc ggcccccgcc aacgccaatc actcatggcg gcggcgaata tttcctccgg
      841 ttccagatta ccgacaatgt cccgataggt ggagattaac tcaccgccgt caccaaccaa
      901 gtgatcaaag aagttgacaa aagtttcctc gtcgcggggc acatcatcgg gattcatgaa
      961 aaattgaaaa ggcttccatt cctcgctcgt gattccgatc aataccggaa catccaccag
     1021 gtcgccatcg ctggcggcgg gcaaaatatc cttggtcaac acctctccat caatcaccgg
     1081 ttgaaaggtc gcttgtttcc agggcggtcg tgaacgaacc gtcacacgct gcgccgccag
     1141 caaagtcgcc atgggcgccg cttcgagaga ggaaatgtcg ggcactcccg ccgcttccat
     1201 aaatgtcttg gtggcatatt cggcaagttc aagatcgcgg aaactcatga gcgagatgct
     1261 ttgaatgatt gccccatgaa ataaccctct ggcctggggc atcatcataa ggcccgtgat
     1321 agcgccacca cccgcagatt gtccgccgac agttacccga tgcggatcgc cgccgaaggc
     1381 ttcgatattg tccctgaccc acttaagagc cgccacatga tcaagcaagg cgttattgcc
     1441 tgatccggcg tagttttcgt caagattctt gaggtgaaga taaccccgct cacccagtcg
     1501 ataatttatg ccaacaaaaa caatatcgcc gttccgggcg aatgaggaac cgtcataaag
     1561 cggaaaagag gctgatcctg aaatataagc gccgccgtga atccacacat agacgggacg
     1621 cttatcgcta tccagagcgg gcgtccatat attgagacag agagcgtctt ctgattgggg
     1681 ttgcggatcc gggccaagga agggctcgaa ccttgtcggg ttctggtaga ttgcgggtcc
     1741 cggaaagacc gcaggtctaa cgccttgcca ggatttgggc ggttgcggcg gcttgaattt
     1801 ggcttctccc gctgtagagc ttgcgaaagg aatgccaccg aaaaacaaac aacgaccgtt
     1861 gtgaaagcct tgaactgctc catttttggt cttggcgatc aggtctgaat tgcagctcat
     1921 agtccggctc tgtcatggct gaatttacga gacaaaggat caatgacaag cttttcgcca
     1981 atccagaaaa tgatgacgat ggcaaagcag gtggcgaaca cggtcgcggc atcggccaca
     2041 gattgtcctt gctgcaagag gaagcctagg ccgctttcgg tgccgaacag ttctgccacc
     2101 aaggcaattt tccaacccac gccgtaggca atccgaacag cagagatgat gaaaggcatc
     2161 aaaagcggta atgtgatttt aaccagaact accatgcggc gacgggtaaa actacgcgcc
     2221 atctcaagca aatccagatc gatttccttc aaaccttccg acacattgac cagacagaac
     2281 ggcgtcagaa tcatcaccat gataaacacg atggtcccgt gggaaggacc gaaccaaatg
     2341 atggccagaa tggcccagcc gactgacgga aacgagttga ggagcggctt gatacgctca
     2401 tggacaatca cctctgtgac cggcagccag cgcggcaaaa aggccagcaa ggagccggca
     2461 aaaacggcga tcagcacggc aattatcaca cggattgtgc tggtaaacac atgaccgata
     2521 tagttcgcat caataaagaa tgtcagtatc tgtttggcga ccaccaccgg cccggggaaa
     2581 ataatactgg gcaattccag ggacagcagc caccagccga taatggccag gacgaccaaa
     2641 ccatccgccg ttatacgcga caagatgcgc tgcttacgca gatcgccaac tgggctatat
     2701 ttttgctcag actgcgccat ggtgcctcgc tagacgagcc tggatgggcg cgaatatcca
     2761 tcgatcggtg gaatagacaa aggcgataat aattacgatc acagccagca ccaacggcat
     2821 atcgaaatct tgtcgcgcta aatttagcat atagccaagg ccggtattac caccaaacag
     2881 ttcagccgtt aaggcgacct tccaggcgac gccgaaacta atccggatgg tggcgaatat
     2941 gaaaggataa agggacggca gaatgaccaa tttaaaacgc ctccacccgg aacgggtaaa
     3001 gctggcggcc atttcgattc gctcttcatc caaattggcc aaaccttcgc tcatgttgat
     3061 gatggcgaag ggtatcagca ccatggagat cacaaatacc accgtaacat cggagatacc
     3121 gaaccagatg attgccagaa aggtccagcc gataccagag aaagaattta gaaaaggact
     3181 aagcctgcca tgggtcatta agcggaaggt ggcgagataa tgagcgagaa aagcgaaagc
     3241 gctgccgatg ataaaagaga tgacaactgc caaaatgatg tgagcaaatg aataaaacat
     3301 atgcttaatt tcatgcacat cggcgaacac cagtccgagg cgtgataaaa ccgcccaggg
     3361 acccggcata acatagctct ccaccaccga gctataggta gtccaaacac ctaagaaaca
     3421 gagtacaaat aaatgcccgg cgagacgcgc ccgtcgtctc gccggaacaa ggccctgagt
     3481 agtcactgaa cttaaagatc ttaaagtctg cgcattaatc tgtaatggca tgctcccaga
     3541 tcactttgtt aacatcggga actttcttta aaatacccat atccttggcc atggtccaaa
     3601 cgagggtcat ggcttttttg tcttcttcat tgatcgcgcc tgggaagaag gaataatcgt
     3661 tgatccaggc tttgaagtag gcgggttcga tcttagccgt agatttagcg atggcagcgc
     3721 ccacatgatc ggcgttggcg agtgcgtata acaccgattc acggagcata cggttaaact
     3781 ctttaaaggc ttccggacgg gctttcagtt tatccggata agtgacgttg acagctgaaa
     3841 ggctatcaag gccaaagagt tctctgatgt ctttgttggt ccaggccaat acacggtaat
     3901 tgcctgtttt caacgcctta taggcttgag aatggattaa ggtagccgct tctacccgac
     3961 cagtttccaa ggccgataac aaggccggcg ccggaatttg cacccaggaa aaatctccgc
     4021 ctttataaga cacgttaact ttatatttct tccaaagggc aatgcgaatc caggtcgtgc
     4081 ccgtcgcccg cagtgaatag ctgccaatct tcttgccttt taggtcggtc agggttttat
     4141 acgggctatc cttcttcacc cagatgccgg cacctaatcg gcctttggcg gagcgcaacg
     4201 cggaagataa gactaccaaa ttaaggccgc ggcgcttggc aaaaggaatc gccatcacag
     4261 cgttcatt
//
LOCUS       DASCNL010000503         1025 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001045213, whole genome shotgun sequence.
ACCESSION   DASCNL010000503 DASCNL010000000
VERSION     DASCNL010000503.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001045213"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..830
                     /locus_tag="QF359_06820"
     CDS             <1..830
                     /locus_tag="QF359_06820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HJO86657.1"
                     /translation="KRVTKIDGTVVKNQAELGHYTSAQWLTPQMDRLFLEGASGRRFF
                     VDQLIYGLDPEHAGPVAAYNHSLRNRNKLLREGNFDPEWFDSIEESLARQGVAIAVRR
                     LEVVARLQAVCRASSGAFPGAEISMVGQVEGWLANEPALAVEDHLREALRACRQSDAS
                     GSATSVGPHRSDFAVCHGETGMTADLCSTGEQKALLIGIVLATARLQTEERGYTPLLL
                     LDEITAHLDKARRTSLFDIILDLGAQAWITGTEDEIFAPLGKQVQHFAVNQGKIVKL"
BASE COUNT          254 a          250 c          286 g          235 t
ORIGIN      
        1 ataagcgcgt cactaagatt gatggcaccg tagtcaaaaa tcaggccgaa cttggccatt
       61 ataccagcgc acaatggctg acaccacaaa tggatcgcct gttcctcgaa ggggcatcgg
      121 gccgccgctt ctttgtcgac caattgatat atggcctgga ccctgagcat gccgggccag
      181 ttgcagctta caaccacagt cttcgtaacc gtaataaatt gctgcgcgaa ggtaattttg
      241 atcccgagtg gtttgattca attgaggaat cattggctcg gcaaggtgtc gctattgcgg
      301 ttcgccggct tgaggtggtg gcgcggctgc aagcggtgtg ccgcgccagc agtggtgctt
      361 tcccgggtgc tgaaatatca atggtcggcc aggttgaagg ctggcttgcc aatgaaccag
      421 ccttagccgt cgaagatcat ttgcgtgagg cgttgcgtgc ctgccggcag agtgatgcca
      481 gtggcagcgc aacatcggtc gggccacatc gcagtgattt tgcggtttgc cacggtgaaa
      541 ccggcatgac cgctgaccta tgctccacgg gagagcaaaa ggctttattg atcggcattg
      601 tcttggccac tgcgcggctg caaaccgagg aacggggcta tacaccgtta ttattactgg
      661 atgaaattac ggcgcatttg gataaggccc gccggacttc cctatttgac attatcctgg
      721 atttgggcgc tcaagcctgg atcaccggca ctgaagacga aatatttgca ccgcttggta
      781 agcaagtaca gcattttgct gtcaaccagg gcaaaattgt aaaactttaa atcaacacca
      841 aacccatcca cgtgactgga ctataaagta tgagcaaaaa atatagcgga aaagacgtaa
      901 acccagaacc cgaagtcatg gaaggggatg aggcttatga tgcccagtcg attaaggttc
      961 tgaaaggcct cgatgcggta cgcaaacgcc cgggtatgta tattggtgat accgatgacg
     1021 gttcc
//
LOCUS       DASCNL010000504         2861 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001048229, whole genome shotgun sequence.
ACCESSION   DASCNL010000504 DASCNL010000000
VERSION     DASCNL010000504.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2861)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2861)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001048229"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2661)
                     /gene="ppdK"
                     /locus_tag="QF359_06825"
     CDS             complement(<1..2661)
                     /gene="ppdK"
                     /locus_tag="QF359_06825"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HJO86658.1"
                     /translation="MSKWVYSFGGGSAEGKAEMRNLLGGKGANLAEMSSLGLPVPPGF
                     TITTELCTHYTSHDNQYPDELKTEVDAALAKVEDTIGTKFGSADNPLLVSVRSGARAS
                     MPGMMDTVLNLGLNDETVAGLANASGDERFAYDSYRRFIQMYGDVVLGVEHHHFEDIL
                     ADHKDDKGVALDTELEADDWKEVAKKFAAKVESELGKPFPQDPHDQLRGAISAVFGSW
                     MNDRAKIYRKLHDIPENWGTAVNVQSMVFGNMSDSSATGVCFTRNPSTGENAFYGEYL
                     INAQGEDVVAGIRTPQPLTIAEKEQNHTDLPSMEETMPAIYQELCDVRQKLEDHYKDM
                     QDMEFTVQEGKLWMLQTRNGKRTAKAALKIAVDMANDGLITKEEAIKRIEPGALDQLL
                     HPTLDPKANRNVLGKGLPASPGAACGKVAFSAQDAEDMVAKGDRVILVRIETSPEDIG
                     GMHAAEGILTTRGGMTSHAAVVARGMGRPCVVGAGQLRVSYQDQTLKCGGQTVSAGDV
                     VTIDGSRGEVMIGEVKTIQPELTGDFGVLMQWVDEIRELKVRTNAETPEDAETAVKFG
                     AEGIGLCRTEHMFFDPERIVHMREMILAVDVEGRKVALAKLLPYQRDDFIDLFTIMKG
                     LPVTIRLLDPPLHEFLPTKEDEMVEVADAAGTDFDTVQARALALHESNPMLGLRGCRL
                     GIMHPEIYEMQCRAIFEAAAKVSKDSGETVVPEVMIPLVGAKREYDIMHDMVQRIAKE
                     VSEETGTELEYLTGTMIELPRAALRAGEIAEQAEFFSFGTNDLTQTTYGLSRDDSGSF
                     LERYQEQGIYEQDPFVSIDVEGVGELIELAAERGRETQGDIKLGICGEHGGDPSSVIF
                     CHKSGLDYVSCPPYRVPIARLAAAQAALNAE"
     gene            complement(2664..>2861)
                     /locus_tag="QF359_06830"
     CDS             complement(2664..>2861)
                     /locus_tag="QF359_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86659.1"
                     /translation="LAVEDYAKAMAKLASLRAPVDAFFDEVTVNCEDATLRVNRLRLL
                     SQIRTTMNQVADFSQIEGGER"
BASE COUNT          637 a          818 c          732 g          674 t
ORIGIN      
        1 ttcggcatta agggcagctt gggctgctgc caatcgagcg atcggcacac ggtagggcgg
       61 gcagctaacg taatcgaggc cacttttatg gcagaagatt accgaggatg gatcgccgcc
      121 atgctcacca cagataccaa gcttgatatc tccctgggtt tcgcggccac gctcggcagc
      181 aagttcgatc agttcgccaa caccctcgac gtcaatgctg acaaaggggt cttgctcata
      241 aatgccttgt tcctgatagc gctcgaggaa agagccgcta tcgtcccgcg acaagccata
      301 ggtcgtctgg gtcagatcat tggtgccaaa actgaaaaac tctgcctgtt ccgcgatttc
      361 gcccgcgcgc aaggcggcgc gcggcaattc aatcatcgtg ccggtgagat attcgagctc
      421 ggtgccggtt tcctcactga cttctttggc aatacgctgg accatatcgt gcatgatgtc
      481 atattcccgt ttagcgccga ccagtgggat catcacttcc ggcaccacgg tctcgccact
      541 gtctttggaa accttggcgg cagcttcaaa aattgcccgg cattgcatct cgtaaatttc
      601 tggatgcatg atacccaaac ggcagccacg gagacccagc atcggattgg attcatgcaa
      661 ggccaaagct cgcgcttgaa cagtatcaaa atcagtcccc gcggcatcag caacctcaac
      721 catctcatct tccttggtcg gtaggaactc atgcagcggt ggatcaagca aacggatggt
      781 gaccggcagc cccttcataa tggtgaagag atcgataaag tcgtcacgtt gatagggcag
      841 caatttcgcc agcgccactt tccggccttc aacatcgaca gccaaaatca tttcccgcat
      901 atgaacgatg cgctccggat caaagaacat gtgctcagtg cggcagaggc caatgccttc
      961 ggcgccgaat ttcaccgccg tttcagcatc ttcgggagtt tccgcattgg tgcgcacctt
     1021 aagttcgcga atttcatcaa cccattgcat aagcacgcca aagtcaccgg tgagctcagg
     1081 ctgaatggtt tttacttcgc cgatcattac ctcaccgcgc gagccatcaa tggtaacgac
     1141 gtcaccggct gaaacggttt gcccgccaca ttttaacgtc tgatcttggt aactaacacg
     1201 caactgtccg gcaccaacaa cgcagggacg gcccatgccg cgcgccacca cggctgcatg
     1261 agatgtcatg ccgccgcgcg tggttagaat accttctgcc gcatgcatgc ccccgatgtc
     1321 ttcagggctg gtttcgatac ggacgaggat caccctatcg cccttggcga ccatgtcttc
     1381 ggcatcttgc gccgagaacg caactttacc gcaggccgca cctggcgaag ccggcagacc
     1441 tttacccaag acattgcgat tagctttcgg gtcaagggtt gggtggagca gctgatcaag
     1501 cgcgcccggc tcaatgcgtt ttatcgcttc ttctttagtg atcaaaccat cattggccat
     1561 atcaacggct attttgagcg ctgctttggc agtgcgttta ccgtttctgg tttgcagcat
     1621 ccagagctta ccttcctgga cggtgaactc catatcctgc atatctttat agtgatcttc
     1681 gagcttttgg cgaacgtcgc agagctcctg atagatcgcc ggcatagtct cttccatcga
     1741 tggtagatcg gtgtggttct gttctttctc agcaatcgtc aatggctggg gcgtacggat
     1801 accggcgaca acatcttcac cttgggcatt aatgagatac tcaccgtaaa aggcgttctc
     1861 gccggtcgac gggttgcggg taaagcaaac gccggtggcc gatgagtcac tcatgttgcc
     1921 aaagaccatt gattgcacat tgactgccgt gccccagttt tccggaatgt cgtgcagttt
     1981 gcggtagatc ttggcccggt cattcatcca actgccaaag acggcactga tcgcgccccg
     2041 caactgatca tgggggtctt gcgggaaggg cttaccaagc tcactttcaa ccttggcagc
     2101 gaatttcttt gcaacctctt tccagtcatc ggcttcaagc tcggtatcca gagcgacgcc
     2161 tttatcatct ttatgatcgg cgaggatatc ttcaaaatgg tgatgctcga caccgaggac
     2221 aacatcgcca tacatctgaa taaagcggcg gtagctgtca taggcaaaac gctcgtcacc
     2281 gctggcgtta gcgagaccgg caacggtttc gtcattgaga cccaaattca gcaccgtatc
     2341 catcatgccc ggcattgaag cgcgggcacc ggagcgcacc gaaaccagca gcggattatc
     2401 agcagagcca aatttcgtcc cgatagtgtc ttcgactttg gccagcgccg catcaacttc
     2461 ggttttgagc tcgtccggat attggttatc gtgtgaggtg taatgcgtgc acaattccgt
     2521 ggtgatggta aagccaggag gtaccggcaa tccgaggctc gacatttcgg ccagattggc
     2581 ccccttgccg cctaacagat ttcgcatttc tgccttgccc tcagcggaac ccccgccaaa
     2641 agaatagacc catttggaga tgctcaacgc tctccccctt ctatctgaga aaagtctgcg
     2701 acttggttca tggtcgtccg tatctgggac agtaatctaa gccggtttac acgaagcgtc
     2761 gcgtcttcgc aattgacggt gacctcatcg aaaaaggcat cgacaggggc ccgcagtgag
     2821 gccagtttag ccattgcttt cgcgtagtcc tcaaccgcaa g
//
LOCUS       DASCNL010000505         2736 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001048424, whole genome shotgun sequence.
ACCESSION   DASCNL010000505 DASCNL010000000
VERSION     DASCNL010000505.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2736)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2736)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2736
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001048424"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..568
                     /locus_tag="QF359_06835"
     CDS             <1..568
                     /locus_tag="QF359_06835"
                     /inference="COORDINATES: protein motif:HMM:NF027681.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJO86660.1"
                     /translation="PYGVSKLTAERMMMDYELAYGLRFVALRYFNAAGADPEGEIGEA
                     HDPEHHLIPLVLDVAAERRDQIYVFGTDYDTPDGTCIRDYIHVTDLAEAHVLALNYLL
                     AGGDTQFLNLGNNQGFSVREVIMAAKKITGRNIEMVESTRRSGDPAQLISDSTLANKT
                     LGWTPQLSGIDIQIEDAWRWHMKFHQHN"
     gene            638..1348
                     /locus_tag="QF359_06840"
     CDS             638..1348
                     /locus_tag="QF359_06840"
                     /inference="COORDINATES: protein motif:HMM:NF012804.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HJO86661.1"
                     /translation="MSVKLEDLLNELVVANHVLANENVVDSFGHISIRNPDNLNHFFI
                     SCSRAPELVSRDDIMEFDLEGNSVDGSTLTPYGERFIHGAIMEARPEVQSVVHNHSLS
                     VIPFGVTGTQLQPIIHTGAAIGRDIPIWDIHDNFGDTDLLVRNMDQGRDLAKCLGDSS
                     VILMRGHGCSVTGPDIKGATLIAVYLQISATLQLQSMPLGDVRYLTPGESEKCTELFF
                     SGLAMDRVWENLTSRLTR"
     gene            complement(1363..1668)
                     /locus_tag="QF359_06845"
     CDS             complement(1363..1668)
                     /locus_tag="QF359_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86662.1"
                     /translation="MKQIIEITCQENPIAKGQAIELLHEKIDEILIKIEVELSPEELT
                     AHQLSFSDQTEVKDEIYAKALARAQSHLEEMMSQIIQMKTQHLLKLKQKMIENTIKN"
     gene            complement(1674..1925)
                     /locus_tag="QF359_06850"
     CDS             complement(1674..1925)
                     /locus_tag="QF359_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86663.1"
                     /translation="MPEGAITIMVATAEWVNQVGHFIVPYFPYWYGNKWLQQIADMVD
                     RKYGVPVGICPMDELIGKTHRLWDLPFWTFFSTVCSSNG"
     gene            2113..2388
                     /locus_tag="QF359_06855"
     CDS             2113..2388
                     /locus_tag="QF359_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86664.1"
                     /translation="MQWGDVTIDLTHGDLLETLRLGDDAEFNIQEIYDDALKVSTADI
                     EGMSASLDAVLDGGDDISQTGEIVDEVFVETDPAGLDDDPLTDDVIG"
     gene            complement(2456..>2736)
                     /locus_tag="QF359_06860"
     CDS             complement(2456..>2736)
                     /locus_tag="QF359_06860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86665.1"
                     /translation="GLNEEAGTGSQTRLLRIKAGVFTTEPFIHDYWEEVYVISGDLTM
                     GSDQEGKGGEKFGPNTYACRPPHNPHGPFKSDSGCMLYEIHYFDEAKA"
BASE COUNT          655 a          644 c          688 g          749 t
ORIGIN      
        1 tccgtatggc gtgagcaaac ttaccgctga gcgcatgatg atggattatg agttggccta
       61 tggcctgcgc tttgtggcgc tgcggtattt taatgcggcg ggagccgatc cggaaggcga
      121 gatcggcgag gcccacgacc ctgaacacca ccttatcccg ctcgtgcttg atgttgcggc
      181 agaacggcgc gaccaaattt acgttttcgg cactgattat gacacgccgg atggaacctg
      241 tattcgggat tatattcatg tcactgattt agctgaagca catgttctcg ccctgaatta
      301 cctgttggct ggaggtgaca cccaatttct aaatctcggc aataaccaag gtttctcggt
      361 gcgtgaagtt attatggcgg caaaaaaaat taccggccgt aatattgaga tggtagaatc
      421 cacccggcgg tcgggtgatc ctgcgcaact gatcagcgat tcaacactgg caaataaaac
      481 acttggctgg acccctcagc tttcggggat tgatattcaa atcgaagatg cctggcgctg
      541 gcacatgaaa tttcatcagc acaattaagc tgtagccgct gtgattatta tttctaacgg
      601 atttagataa caaagcaaaa agggataatt tcttaagatg agcgttaaac tcgaagacct
      661 gctgaacgaa ctggtggttg ccaatcatgt tctcgccaat gaaaatgtgg ttgattcttt
      721 cggtcacatc agtatccgca accccgataa cctcaatcat tttttcatat cgtgctcgcg
      781 cgcgccggag cttgtcagcc gtgatgatat catggagttt gatctcgaag gtaacagcgt
      841 tgatggctcg acgctgacac cctatggcga gcggtttatc catggcgcca tcatggaagc
      901 ccggccggaa gtgcagtccg ttgtccacaa tcactcgctt tcagtcattc catttggcgt
      961 caccggcacc cagctgcaac cgattattca cactggcgca gcgattggcc gggatattcc
     1021 gatctgggat attcatgata atttcggcga cactgatttg ctggtgcgca atatggatca
     1081 aggccgtgat ctggccaaat gtttgggtga cagtagtgtt atactgatgc gcgggcacgg
     1141 ctgttcggtc accggaccgg atatcaaagg ggcgaccttg atcgcggtat atctgcagat
     1201 atcagctacc ctgcaacttc agtcaatgcc gctcggcgat gtccgctacc tgacaccggg
     1261 cgagagtgag aaatgcactg agttattctt tagcggtctg gcaatggacc gggtatggga
     1321 aaacctcaca tcgcgcctca cccggtagca tattaaatca ccctagtttt ttatcgtatt
     1381 ttcaatcatt ttttgtttta gtttaaggag atgctgagtt ttcatttgaa taatctgcga
     1441 catcatttct tccaaatggc tttgagcccg ggcaagtgcc tttgcataga tttcgtcttt
     1501 gacttcggtc tgatcggaaa aactgagctg atgggcggta agctcctcgg gcgataattc
     1561 aacttcgatt ttgattaata tttcatcaat tttttcatgc agtaattcga ttgcctggcc
     1621 ttttgctatt gggttttctt ggcatgttat ttcaataatc tgtttcatag aattcacccg
     1681 tttgacgagc agacggttga aaaaaatgtc caaaatggaa ggtcccacaa tcgatgtgtt
     1741 ttacctatta attcatccat cggacaaata ccgaccggca caccatattt acgatcaacc
     1801 atatcagcaa tctgttgcag ccatttattc ccataccaat acggaaaata gggcacgata
     1861 aaatggccga cttggttaac ccattctgct gtcgcgacca taattgtgat ggccccttct
     1921 ggcattaagg ggtccggtag gtaaccagat ttatttcttt aacttgggcg atggctccga
     1981 tgcgattact gatttgggtg gcatggatat gctgtaatca atggtgatct tgccgattgg
     2041 agtaatttca acatcctggc caccaagggc gataacggct cgttcctgaa cctaatgttc
     2101 tcggaaggga acgtgcaatg gggcgacgtc accattgatc tcactcatgg cgatttgctc
     2161 gaaaccctgc gtttgggtga tgatgccgag ttcaacatcc aggaaatcta tgacgacgcc
     2221 ctgaaagtta gcacggccga tattgaaggc atgtcagcca gcttggatgc cgtgctcgac
     2281 ggcggggacg acatctctca aactggcgag atcgttgacg aagtgttcgt tgaaaccgat
     2341 ccagcgggtt tggatgatga tccgctaacg gatgatgtga tcggctaaat tttcttaaac
     2401 tctccctccc cgcaaaggtg gagagggtta ttggggagtg ctggttaggc gctatttaag
     2461 cttttgcttc atcgaagtag tgaatttcat acaacatgca gccactgtcc gacttgaacg
     2521 gtccatgggg gttatgcggc ggacggcagg cataggtgtt cggtccaaac ttttcaccgc
     2581 ctttgccctc ctggtcactg cccatggtga gatcgccaga aataacatag acttcttccc
     2641 aatagtcgtg gatgaagggt tcggtggtaa aaacgccagc cttgatacgt aacaaccggg
     2701 tttggctgcc cgttccagcc tcttcgttga gccctc
//
LOCUS       DASCNL010000506         1646 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001054129, whole genome shotgun sequence.
ACCESSION   DASCNL010000506 DASCNL010000000
VERSION     DASCNL010000506.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001054129"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..968)
                     /gene="had"
                     /locus_tag="QF359_06865"
     CDS             complement(<1..968)
                     /gene="had"
                     /locus_tag="QF359_06865"
                     /EC_number="1.1.1.368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-hydroxycyclohex-1-ene-1-carbonyl-CoA
                     dehydrogenase"
                     /protein_id="HJO86666.1"
                     /translation="MSDTAYRWEMIEPGKPMEKVEFDPFPPGGGEVVVEVEGCGVCHT
                     DLGYYYDGVRTNAALPLALGHEISGRVVAGGKGYEDWVGKAVLIPAVIPCGECDLCKR
                     GKETICRQQYVPGCDTHGGFASHIKIPGFGLCEIDEAKLAAAGLDLADVSVVADALTT
                     PYQAVAQAGLSEGDLAIVIGVGGVGGYCVQVAAAMGATVLAVDVDQAKLDQIGKAGAA
                     ATFNPKDYPGRELKKAVFAFAAENGLRATEWTIMECSGSAPGQQTAYGLLVHGATLCV
                     IGFTMDKVEIRLSNLMAFHARALGNWGCTTSNYPAALDLVFDGRVNV"
     gene            complement(1018..>1646)
                     /locus_tag="QF359_06870"
     CDS             complement(1018..>1646)
                     /locus_tag="QF359_06870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86667.1"
                     /translation="GKICDAPICDGIGSTEALHIYISNTIDDVRSLSSGKVVPGYELR
                     IANDDGEDVPVGEQGRLLLKGPSVTEIYWNNPEKTAKTIIDGWLDSGDTYFQDEDNYF
                     YYSGRNDDMLKVGGIWVSPFEIESALIEHPKVLEAAVVGRDDDAGLVKPEAWVVLKDS
                     SERSDSLADEIQEQCKNNLAPYKYPRWINFTDDLPKTATGKIQRFKLR"
BASE COUNT          385 a          467 c          397 g          397 t
ORIGIN      
        1 acgttgactc taccgtcgaa caccagatca agtgcagccg gataattgct ggtggtgcag
       61 ccccaattac cgagggcgcg ggcatggaaa gccattaaat tggacagccg gatttcaact
      121 ttatccatgg tgaagccaat cacgcaaagg gtcgcgccat gaaccagcaa gccataggcc
      181 gtttgctgtc caggagccga gccggaacat tccataattg tccactcggt ggccctcaga
      241 ccattttctg cagcaaaggc gaacacagct ttttttagct cgcgtccggg ataatctttg
      301 ggattaaacg ttgccgccgc gccggctttg ccaatttgat ccagtttcgc ttgatcaacg
      361 tcaaccgcca gaactgtcgc acccatcgcc gctgcgacct gtacgcagta gccgccgact
      421 ccaccgacgc cgatcacaat cgctaaatcg ccttcgctta ggcctgcttg cgcaaccgct
      481 tggtaaggcg tggtcaaggc gtcggcaacc actgagacat cggcgagatc gagaccggcg
      541 gcagctaatt tcgcttcatc gatctcacat aagccgaagc ctggaatttt aatgtggctg
      601 gcgaaaccgc catgagtatc gcagccgggc acatattgct ggcggcagat tgtttccttg
      661 ccgcgtttac aaagatcaca ctcgccgcac ggaataaccg ctggtatcag cacagctttg
      721 ccgacccaat cttcatagcc tttgccgccg gcgaccaccc ggccactgat ttcatggccg
      781 agtgccaacg gcaaagccgc gttggtgcga acgccatcat agtagtaacc gaggtcagta
      841 tgacagacac cgcagccttc aacttcaaca acaacttcac caccgcccgg cggaaaggga
      901 tcgaattcaa ctttttccat cggtttgccg ggttctatca tttcccaacg gtaggctgta
      961 tctgacatgt cttaaaacct cgagttatgt tatagagtgg gttgctggta tcatcactta
     1021 gcgcaactta aagcgctgaa ttttaccggt tgccgttttt ggcaagtcat cggtaaaatt
     1081 gatccagcgg ggatatttat agggggccaa attattttta cattgttctt gaatttcatc
     1141 agccaggctg tccgaccgtt cgctgctatc ttttagaacc acccaagctt caggtttaac
     1201 cagaccggca tcatcatccc ggccgacgac ggcagcttcc aggactttcg ggtgctcgat
     1261 cagcgccgat tcgatttcaa acggcgagac ccaaatacca ccgactttga gcatgtcgtc
     1321 attgcggcca ctataataga agtagttgtc ctcatcctga aaataggtgt cacccgaatc
     1381 gagccagcca tcgataatgg tttttgcggt tttttcaggg ttgttccaat aaatctccgt
     1441 caccgacggg cctttaagca gcaatcggcc ttgttcgcca accggcacgt cttcaccgtc
     1501 atcattggca attctcaatt cataaccggg cacgactttg ccgctggaga gcgagcgcac
     1561 atcgtcgatg gtgttcgata tatatatgtg cagcgcttcg gttgagccaa tgccatcaca
     1621 gatcggcgca tcacagattt tacccc
//
LOCUS       DASCNL010000507         1821 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001054194, whole genome shotgun sequence.
ACCESSION   DASCNL010000507 DASCNL010000000
VERSION     DASCNL010000507.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001054194"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            141..533
                     /locus_tag="QF359_06875"
     CDS             141..533
                     /locus_tag="QF359_06875"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HJO86668.1"
                     /translation="MARRFLEGTWQKKNRAFSPAVVTSGGSTIWLAGHGAIRDDAGNS
                     LAGDFTAQAHQSFKNLAATLEEAGGSLKDIVTMTVYIIDVRFGDEFINIRREYFDDFP
                     ASAMITVAGFAQPEMMVEIQGIAVIDDA"
     gene            1271..>1821
                     /locus_tag="QF359_06880"
     CDS             1271..>1821
                     /locus_tag="QF359_06880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridine nucleotide-disulfide oxidoreductase"
                     /protein_id="HJO86669.1"
                     /translation="MSELNLGFNLKFNELYELSGLTKVDQAFLGYLKTNDSDLADQLV
                     ADRLEKPDTKAESQFIIDAGPYLENFLAELFGIKTEITDLNDCHHALQPFFDFKRTFI
                     QRKAFKAVTAEAAAQLDGEELAEKLCALISHTYHETKDEMVFVEKVSEWLADPEANEE
                     ALELATNYAGWALRTREGREKHA"
BASE COUNT          514 a          412 c          437 g          458 t
ORIGIN      
        1 acagcggtgg ctataaagtc gaaatcaccg ccgatggtca cggctcaaaa tccgtcgatg
       61 ttgagcttgg cgagagcatc acgttgggcg atatttactt gtaagttaag acgccatatc
      121 taaaacgcag gaaggcaagt atggcacgtc gatttcttga aggcacctgg caaaaaaaga
      181 accgggcgtt ctctcccgcc gttgtaacat cgggaggatc gaccatttgg cttgccggcc
      241 acggtgccat tagagatgac gcaggcaatt cattggcagg agattttacc gctcaggcac
      301 accaatcctt caagaatttg gcggcaacgc tggaagaggc cggtggctca cttaaagata
      361 tcgttaccat gactgtttat attatcgacg ttcgtttcgg cgatgaattt ataaatattc
      421 gccgggaata ctttgacgat tttcccgcca gcgccatgat cacggtcgcc ggatttgcac
      481 aaccagaaat gatggtagaa attcagggaa tcgcggtaat cgacgacgcg taattagact
      541 actgctcgta ggcatccaat acctgggacg cataaatcat cgatggacca ccgcccatat
      601 aaatggccat ggaagtgtaa ctccccagcc ctttagcacc ggagagttaa tataaaatct
      661 ctgagattca actaatttct atcctgtggt ccgtacgcag cgcacatagt taaagacctg
      721 gacgacatcg ccttgagggc cttggcccga tttcgggtag tcattgggat cgcctgcctt
      781 ggagtcggag cgctggacgc cgacaccatg aacgtcgatg atgttagacg agcctagctg
      841 attgccgcgg tcacgtcctc caagcggtcc gaaggaaggg gagttaatat ccgcataaaa
      901 aggagttttc gaaaattgat aaatgaaaag tatagcttat tgggttatcg ttactgacga
      961 cttaatctaa atcaattctg ccaaattttg tcagacctac agcttatttc tagattaaat
     1021 cagtatttcg gtaccattta acttgatttt ttgaaattga actgttagtc tgccaaacaa
     1081 ttaaaaaatg ggactaattt agcccattaa attaagagcg tccgccaggt ataaaatcgt
     1141 aagtaaagtc cttggctcta atcgcttcat ttgtgatcaa catcagtatc ctcggggaag
     1201 aggtttgcgc accggcgcca taacgtcgaa agcgcattgt aatttgtgag ctgcgaatga
     1261 ggtatgtgcg atgtctgagc taaatttagg tttcaacctg aaattcaatg aattatatga
     1321 gctatcgggg ctgacaaaag tcgatcaggc atttcttggc tatctgaaaa caaatgattc
     1381 agatctcgct gatcaattgg tagctgaccg tctggaaaaa cccgacacca aagcagaatc
     1441 ccaattcatt atcgatgccg gtccttacct cgagaatttt ttggcggaac tgtttggtat
     1501 caaaaccgag atcactgacc tcaacgattg tcatcatgcg cttcaaccgt tttttgattt
     1561 caaacgcacc ttcattcaac gcaaagcctt taaagccgtc accgccgaag ccgccgccca
     1621 gcttgatggc gaggaactag cggaaaaatt atgtgctttg atcagccaca cctatcatga
     1681 aacaaaagat gagatggtct ttgttgaaaa agtctccgaa tggctggcgg atccggaagc
     1741 aaatgaagaa gccctggaac tggccacaaa ttatgctggt tgggcgctca ggacgcggga
     1801 agggcgggaa aaacacgccg a
//
LOCUS       DASCNL010000508         2502 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001054634, whole genome shotgun sequence.
ACCESSION   DASCNL010000508 DASCNL010000000
VERSION     DASCNL010000508.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001054634"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="QF359_06885"
     CDS             complement(<1..279)
                     /locus_tag="QF359_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86670.1"
                     /translation="MVVGVTGYGIYIPKYRIERSIIGKAWSGRSRGQNAVAGADEDVI
                     TMAAEAALNAVTHADIDSTCDLETLYFGTSSALDFERSSLGVIGEVLRA"
     gene            complement(289..1146)
                     /locus_tag="QF359_06890"
     CDS             complement(289..1146)
                     /locus_tag="QF359_06890"
                     /inference="COORDINATES: protein motif:HMM:NF014757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HJO86671.1"
                     /translation="MAIEKVLVVGAGQMGHGIAQVCVTGGAEVKLFDTSEKAAQRGYD
                     KILAAVKRGVEKGRYSDTDMKDFAGRLSLVKSYDEALDVDMVIEAAPENVDIKRKIAT
                     DMDTLMPEKVILATTTSALPITDIMNQTKHPERTIGTHFHHPPAVMKLVEVVNGFSTA
                     PETTDTMIKFLASVGKAPVPCKDYPGFVSSRVGIIMINEGIHTLADGVSSAEDIDAAC
                     RYGFNWPMGPLELSDLIGLETILMILDDLTFKLGDRFRPSPLLRQMVSAGHIGVKVGK
                     GFYDHNKKG"
     gene            1357..>2502
                     /locus_tag="QF359_06895"
     CDS             1357..>2502
                     /locus_tag="QF359_06895"
                     /inference="COORDINATES: protein motif:HMM:NF024732.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA hydrolase/transferase C-terminal
                     domain-containing protein"
                     /protein_id="HJO86672.1"
                     /translation="MPHYISAQDAARLLHEDASVYIQAANGEPTELTSAISTDAQSGN
                     GIHFTAIMLPGVNRTDPASLGESSDAVSFFITPETSQSFKEGRTVFLPLSYSGITRYF
                     ADSNGFDFALIQVSPPDAEGNCSLGSSVDFVPAIIPKTKTLIAEINQAMPFQHGSPTI
                     RLDSIHYAVETDHPLVGFDEIVINEEQNTIGRLVAELIADGSTIETGIGQLPTMVLKA
                     LHDKNDLGVHSGMISDAMVDLIDSGVINGRQKNVDTGKVVAGVALGSPRLHAFIRHRE
                     DIFFRPVTYTHNPDIIKQNDNFIAINSVIEIDLFGQINGETIGGKQVGGQGGLADFMR
                     GAKLAKNGRSIIVLPANVAGHTISRIVLKLDVVTCPRSDVDYVVTEYG"
BASE COUNT          658 a          644 c          581 g          619 t
ORIGIN      
        1 tgcccgtaaa acctcaccga tcacgccaag cgaggaacgc tcaaaatcga gggctgagct
       61 agtgccgaaa tagagagtct caagatcaca cgtgctatct atatcggcat gggtgacggc
      121 attgagagcg gcctctgccg ccatggtgat gacatcttca tccgctccgg cgaccgcatt
      181 ttgtccgcga ctccgaccgg accaagcctt gccgataatc gaacgttcaa tccgatattt
      241 cgggatataa atcccgtatc cggtgacgcc aacaaccatg gggacagcct aacctttttt
      301 gttgtgatcg taaaaacctt tgccgacctt aactccaata tgccccgccg aaaccatttg
      361 gcgtaacaaa ggtgatggcc tgaagcgatc ccctagcttg aaggttagat catctagaat
      421 catcaggatg gtttccagtc cgatcaaatc ggataattcc agaggtccca tgggccagtt
      481 aaagccgtag cgacaagccg catcgatatc ttctgctgaa ctgacgccgt cggccagggt
      541 gtggatgcct tcattgatca taataatacc tacgcgagaa gagacaaaac cgggataatc
      601 cttgcagggc accggtgctt taccaacgga tgccaagaac ttgatcattg tatcggtggt
      661 ttccggcgca gtggaaaaac cgttaaccac ttcgaccaat ttcatgacgg cgggcgggtg
      721 atgaaaatgg gtgccaattg tcctttccgg atgtttagtc tgattcatta tatcggtaat
      781 gggtaacgcc gatgtggtgg tggccaggat gaccttttcc ggcataagag tgtccatatc
      841 cgtcgcaatc ttacgcttga tatcaacatt ttcgggtgct gcttcgatga ccatatcgac
      901 atccagagct tcatcatagc ttttcaccag ggacaaacga ccagcaaaat ctttcatatc
      961 agtgtccgaa tagcggccct tttccacgcc gcgttttacc gcagctagaa ttttatcgta
     1021 gcctctttgg gcagcctttt ctgaggtatc aaatagttta acttccgcgc caccagtaac
     1081 acaaacctgg gcgatgccgt ggcccatctg cccggcgccc acaactaaca ctttctcgat
     1141 agccaagaat aaatcctccc taaataacat aataaaacga acgatcgttt tattatgtta
     1201 taagttggaa acaattttgt caacgagctc gaattatctc gatacttacc gctaaattaa
     1261 gcctcctaat taaacttttt tagagaatta gaattttgct gtgttagagt tggacggata
     1321 aaaaaccatc cacaaccaaa taatgagcct ttaaaattgc cccactatat ttcagcacag
     1381 gatgccgcaa ggctgcttca cgaggatgcc agcgtatata ttcaagccgc caacggcgaa
     1441 ccaactgaac tgacgtcggc catttccact gatgctcagt cgggcaacgg catccacttt
     1501 accgccatca tgttgccggg cgtcaaccgt acggacccgg cgtcattggg tgaaagttct
     1561 gatgccgtca gcttttttat cacgcctgag acaagccagt cttttaaaga aggtagaacg
     1621 gtttttcttc ccctctccta tagcggcatc acgcgatatt ttgccgatag caacggtttc
     1681 gattttgctc tgattcaggt gtcgccacct gacgccgagg gcaattgcag cctcggttca
     1741 tcggtcgatt tcgtaccggc gattataccc aagaccaaaa cgctaattgc tgaaatcaac
     1801 caagctatgc cattccagca tggcagccca actatacgtc tcgatagtat ccactacgcg
     1861 gtagagacag atcacccatt agtgggtttc gacgaaattg tcatcaacga agagcaaaat
     1921 acgatcggtc gattggtcgc ggaattgata gccgacggtt caaccatcga aaccggcatc
     1981 ggccaactgc cgaccatggt gctcaaggcg ttgcatgaca aaaacgatct cggtgtgcat
     2041 tcgggcatga tatccgacgc catggtggac ttgatcgata gcggtgtaat caatggcaga
     2101 caaaaaaacg tcgataccgg caaagttgtt gctggtgttg cccttggctc tccacggttg
     2161 cacgccttta tccgccaccg tgaagacatt tttttcaggc cggttactta tactcacaac
     2221 cccgacatta tcaaacaaaa cgataatttt atcgccatca attcagtcat cgaaatcgat
     2281 ttgtttggac aaattaatgg cgagaccatc ggcggtaagc aggtgggggg gcaaggaggg
     2341 ctagccgact ttatgagagg ggccaaactg gcaaaaaacg gccgttcaat catcgtcctg
     2401 ccggccaatg tcgcgggcca caccatttcc aggattgtac tgaaattgga cgttgtcacc
     2461 tgccccagat ccgacgtgga ttatgttgtt acagagtatg ga
//
LOCUS       DASCNL010000509         1266 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001055704, whole genome shotgun sequence.
ACCESSION   DASCNL010000509 DASCNL010000000
VERSION     DASCNL010000509.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1266)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1266)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001055704"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(74..574)
                     /locus_tag="QF359_06900"
     CDS             complement(74..574)
                     /locus_tag="QF359_06900"
                     /inference="COORDINATES: protein motif:HMM:NF013923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO86673.1"
                     /translation="MTDVTLTVNGEERTASVPPETTLLKMLREDLNLTGAKLGCDVGD
                     CGTCTVLVDGIAVNACLMLAGQANGKKIETIEGLSTLEEYHPIQKAFEEVAALQCGFC
                     GPGMIMSTKAMIDQGDDLSKQDIRDALSGNLCRCTGYTKIIDGVIDAYEEITGKKVPE
                     ISPRAA"
     gene            complement(588..>1266)
                     /locus_tag="QF359_06905"
     CDS             complement(588..>1266)
                     /locus_tag="QF359_06905"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO86674.1"
                     /translation="LTDAGLRIGAGVTHSEIMADLLIAEHAPAMIDAAHTVGAVQTRN
                     LGTLGGNLVTCVPSMDSGPTLLALDAQVTILGPKGTRQIDLSKFFVGVRKTALEPDEL
                     LLEVIIPKDNLGKPAGFIKFGLRKGQALALVNAASAFRVEDGKFKDVRIALGAVAPVV
                     MRAIKAEAHLEGQAISLELIDEAAKLSIGEAKPIDDFRASKEYRNSLIEVGARRTLQA
                     VLDLANG"
BASE COUNT          271 a          369 c          301 g          325 t
ORIGIN      
        1 tttctgagac tctctagggt ttcagatttt tttttaactt taacgtcatc tgccattttt
       61 ctgctccctc accctacgcc gcacgcgggc tgatttccgg tactttttta ccggtgattt
      121 cttcatacgc atcgatcacc ccgtcgataa tcttggtata gccggtgcag cggcagagat
      181 tgcccgagag cgcatcgcga atatcctgtt tgctcagatc atcaccctga tcaatcatcg
      241 ccttggtcga cataatcatg cccggaccgc aaaaaccaca ttgcagcgcc gcaacctctt
      301 caaaggcttt ttgaatggga tgatattctt ccaaggttga cagcccttcg atggtctcga
      361 tttttttgcc attggcttgc cccgccagca tcaaacatgc attgaccgcg ataccatcga
      421 ccagcacggt gcaggtgcca caatcaccaa catcgcagcc gagcttggcg ccagtgaggt
      481 ttaaatcttc ccgcagcatt ttaagcagcg tggtttccgg cggtacgctg gcggtgcgtt
      541 cttcaccgtt tacggtaagt gttacgtctg tcatttctct attcccttta tccgttggcc
      601 aagtcgagca ctgcttgcag agttcgccgg gcgccaactt cgatgagact attgcggtat
      661 tctttggaag cgcggaaatc atcgattggc ttcgcttcac caatagagag tttggctgct
      721 tcatcaataa gctctagtga gattgcctgg ccttccaggt gggcttcggc tttaatcgcc
      781 cgcatcacta ccggggcgac cgcgcccaac gcaatccgca cgtctttaaa cttaccatcc
      841 tcaacccgaa aagctgaagc ggcgttcacc agcgccaaag cctgaccttt acgcagacca
      901 aatttgataa agccggccgg cttgccgaga ttgtcctttg ggatgatcac ttccaataag
      961 agttcatcag gttccagcgc cgttttacgc acgccgacaa aaaactttga taaatctatt
     1021 tgacgggtgc ctttcgggcc caaaatggtc acttgtgcat ccaatgccaa cagcgtcggc
     1081 ccgctatcca tagacggcac acaggtgacg aggttgccgc caagggtacc gaggttgcgg
     1141 gtttgcacgg caccaaccgt atgcgcggca tcaatcatcg ccggtgcgtg ctcggcaatc
     1201 agtagatccg ccataatctc cgagtgggtt acgcctgcac cgatcctgag ccccgcatcg
     1261 gtcagc
//
LOCUS       DASCNL010000510         1640 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001059703, whole genome shotgun sequence.
ACCESSION   DASCNL010000510 DASCNL010000000
VERSION     DASCNL010000510.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001059703"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(149..274)
                     /locus_tag="QF359_06910"
     CDS             complement(149..274)
                     /locus_tag="QF359_06910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86675.1"
                     /translation="MLVNCPVSKDNRRGLAKHFNLYFAKEVPSRDELLVDVGRDI"
     gene            complement(323..1528)
                     /gene="pcaF"
                     /locus_tag="QF359_06915"
     CDS             complement(323..1528)
                     /gene="pcaF"
                     /locus_tag="QF359_06915"
                     /EC_number="2.3.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HJO86676.1"
                     /translation="MTEAFICDAIRTPIGRYAGGLSSIRTDDLAALPITTLKERNPSV
                     DWEKIDDVIYGCVNQAGEDCRNVGRMALLLAGLPESVPGVTVNRLCASGMHAVGSAAR
                     AIKADDADFYIAGGVESMSRSPFAMAKAHTAFSRNAEIYDTTIGWRFVNPKMKQLYGT
                     DEMGETAENVAEDYKISREDQDTMALRSQLKTEAAQADGRLAEEIMPVTIPQRKGDDI
                     IVDKDEHPRAGSTIDGLKKLRPAFREGGSVTAGNSSGINDGSCALIIASEEAAKEHGL
                     TPKARILGLAAGGVPPRVMGIGPVPSTQKLLTRLGLTMDDMDIIELNEAFAAQGLAVL
                     RELGVADDDERVNPQGGAIALGHPLGASGARLVTTAMYQLQRNGGSHALCTMCVGVGQ
                     GSSIIIEKV"
BASE COUNT          373 a          453 c          402 g          412 t
ORIGIN      
        1 gcgcattggt aactttaatg tccctggtat tggccgcttc gacatctaaa tggtcgaggc
       61 cgactgacat cacgtaaatc aagcctaaat ttggcagttg gtccatcaag gtggtatcga
      121 cgtggcgcga cccatccgaa attattattt aaatatcgcg accaacatcg acgagcagtt
      181 cgtcgcggct cggcacttcc ttggcgaaat acaagttgaa atgcttggca agtccccggc
      241 gattgtcctt actgaccgga caatttacca gcacccctag tttctggcct gtcttggcct
      301 tacagtgtcc tcgatttttc ttttagacct tttcgatgat tatcgaagag ccttggccga
      361 caccaacaca catcgtgcaa agtgcatggc taccgccgtt ccgttgcaac tgatacatcg
      421 cggttgtaac cagccgtgcg ccactggcgc ccaacggatg acccagcgca atggcgccgc
      481 cttgcggatt gacgcgttca tcatcatcgg cgacaccaag ttcacgcagt acggccagac
      541 cttgcgccgc aaaggcctcg tttaattcga taatatccat atcatccatc gtcagaccga
      601 gccgggtgag cagtttttga gtcgacggta cgggcccaat tcccatgacc cggggtggta
      661 ctccaccggc tgcaagccct aggatacgcg ccttcggcgt cagcccgtgt tcttttgcag
      721 cctcttctga agcaatgatc agcgcacagg agccgtcatt gatgcccgac gaattacccg
      781 cagtcaccga ccctccttcc cggaaggctg ggcggagctt ttttaatcca tcgatggtcg
      841 agcctgcccg cgggtgttca tctttatcaa cgataatatc gtcaccttta cgctgcggga
      901 tggtaacggg cattatttct tcggccagcc tgccgtcagc ttgcgccgct tcagtcttca
      961 attggctccg cagcgccatc gtatcctggt cttcgcgcga aattttataa tcttcagcaa
     1021 cgttctcggc ggtttcaccc atttcatcag taccgtagag ttgtttcatt ttgggattga
     1081 cgaaacgcca gccaatggtc gtgtcataga tttcggcatt gcgggaaaac gctgtatgcg
     1141 ctttcgccat cgcaaaagga gagcgcgaca tactttcgac acctcccgca atataaaaat
     1201 cggcatcatc ggctttgatc gcgcgcgccg cactgccgac ggcatgcatg ccggaagcac
     1261 aaagccggtt gaccgtgacg ccgggtacac tttcgggcaa acctgctaaa agtaatgcca
     1321 tacgaccgac attgcgacag tcttcgcccg cttgattaac gcagccgtaa attacgtcat
     1381 ctattttctc ccaatcgaca gacgggttgc gttcttttaa ggtggttatc ggtaaagcgg
     1441 ccaaatcatc ggtgcgaatg gatgaaagcc cgccagcata gcggccaatg ggagtgcgga
     1501 tcgcgtcaca aataaaagct tcggtcataa taatttgcag gttctgagga acctgtccct
     1561 agttaattga tatgggtgta ttttaaggga ccaaatggct tggtgcaatt cacctataaa
     1621 aattgttcct atttggaaca
//
LOCUS       DASCNL010000511         4221 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001062992, whole genome shotgun sequence.
ACCESSION   DASCNL010000511 DASCNL010000000
VERSION     DASCNL010000511.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4221)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4221)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4221
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001062992"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="QF359_06920"
     CDS             complement(<1..695)
                     /locus_tag="QF359_06920"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJO86677.1"
                     /translation="MAKAVGKVFIFLLLVFGVFNWVGYSVTELTGGEKKAAMTGAVEV
                     TPEGGEAIYWGKGRCFTCHSVGDRGSAVRGPNHGQFGEKFPLPMGERAVERAKEREKK
                     TGKKFTALDYLVESLAEPGAYVVKGYKNEMAVVYAPPISLSLDEIKATVAYLQSQGGE
                     FDAAAINKPGEITQGFYGKIAVASAAGGGDPSHGKVVYEETCGDCHSLEGERGDVGPD
                     LSTIGTKGLKFIS"
     gene            complement(707..2902)
                     /locus_tag="QF359_06925"
     CDS             complement(707..2902)
                     /locus_tag="QF359_06925"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013791.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HJO86678.1"
                     /translation="MHSSREPVFLAKTRRRQAVIAGALIAIIFFAFPALAQEANVYRQ
                     VLGLDSRKVVWFLAQMHLFFGAFVLGVPLFAVIIEIVGWRSNDQRYDKLAYEFTSLLS
                     VAYATTAAFGGMLAFALFSLYPTFMGYMASTFKDVMFVYALLFFAETFALYIYYYGWN
                     AMQNRTPYSARLQMIFKTIGVALFVVTVLFFFDIIGWKMRGDTRVFMALLYLLPMSIG
                     FYLMKDLKSTHIFIGITLNVVGTAIMQAANSMAGFMMSPAGVNEAGALTDHVWVAFEN
                     ILATPIAVHRMLGNLAFGGLVAGSYAAVKFIGSKNQAEKAHYDWMGYIANLVAVAALI
                     PLPFAGYYLGREVYSNSAVMGNNMMGGDFSWTFIIQALLVGSIFLITNYYLWSGMTRI
                     PGSDRYYKYIKYILFALCVSFAVWLTPHNLPLTGQEVSEMGGSQYHPTLKFLGLMPAK
                     NAVINLIILATFFSFLLYRRGNKSDIVPISQQGRAPAVVISLAGTLAVFIVGQYAVTL
                     ITMDPAHLDLPADRAEFFRTVGYLLVFNCVVAVITVLLALRDRGKLAQGLYMAVTAFN
                     VTIFLGVYGFVVMEQASPFLRNVAVAQFLQLIACLILVTAIDLYLFRSAKEIGPMQWG
                     KMTIRSQYALLLLTFVITLNMGLMGFIRSGLRGDWHIFGVMRDTSEWSFTPSNFTMTQ
                     MVGTSFLVFMVGIAFMFWIGGMAAQEHSDDHDDEHENQQSTTASKQPGE"
     gene            complement(2943..3713)
                     /locus_tag="QF359_06930"
     CDS             complement(2943..3713)
                     /locus_tag="QF359_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HJO86679.1"
                     /translation="MKIAVVTAVGLNLTTGISTDSQAAKAKYKAGAVSNGGSISGKVT
                     FSGTVPAEGVEKILITKNPDVCGKGEREVVWIDVKDGALRGTFVFIHKIKAGKKWDKP
                     KGGNYLINQKGCRFRPWAQVIQPGPVIIRNSDKGVLHNINTREMIGVEKKRVVKRTVF
                     NFGQPDPGDIKQDLKPRRSPYISINCEAHNFMFGFMMAPKNPYAVVVKDDGTYSLDNV
                     PAGKYTVKAWHPRLGVIKSKITVKGGGKAAANFSFKAK"
     gene            complement(3849..>4221)
                     /locus_tag="QF359_06935"
     CDS             complement(3849..>4221)
                     /locus_tag="QF359_06935"
                     /inference="COORDINATES: protein motif:HMM:NF025030.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HJO86680.1"
                     /translation="YLAHRLEDGDSFIRTEAIKALSNMGVEIMQIDQLIDDEERSVRL
                     AAAEALVTFEGDDALERIIDFAFANEGYHRLEAGQLLRQIGAVKANPPLIAVIEDENR
                     RREWQVAIEVLGSINSKNIRQ"
BASE COUNT         1118 a         1089 c         1017 g          997 t
ORIGIN      
        1 tccgagataa atttaaggcc tttggtgcca atcgttgaaa gatcgggacc aacgtcaccg
       61 cgctcaccct caagcgaatg acaatcgccg caggtttctt catagactac tttgccatgc
      121 gagggatcac caccaccggc ggccgacgca acggcaattt tgccgtaaaa gccttgggtt
      181 atttcgcctg gcttattgat tgccgcggca tcgaactcac cgccttgcga ttgcagatag
      241 gccacagttg ctttgatttc atccaggctt agcgaaattg gcggtgcata aactacggcc
      301 atttcatttt tgtagccttt aacgacgtag gcgccgggct cggccaggct ctcgaccaga
      361 taatcaagag cggtaaattt cttgccggtt tttttctcgc gttccttggc acgctcaacg
      421 gcgcgctccc ccatcggcag cgggaatttc tctccgaact ggccatgatt gggtccacgc
      481 accgcgctgc cccggtcacc aactgaatga caggtaaagc agcggccttt gccccagtat
      541 atcgcttcac caccttccgg tgtgacttca acggcaccag tcatcgccgc tttcttttca
      601 ccacccgtta gctcggtgac cgaataaccg acccagttaa agacgccgaa aaccagcaat
      661 aagaagataa aaacttttcc aacagctttt gccatagagt tattccttac tcgcccggct
      721 gtttgctggc ggtagtagat tgctggtttt catgttcgtc atcatgatca tcgctatgtt
      781 cctgggcagc catgccacca atccagaaca tgaaggcgat gccgaccata aaaaccagga
      841 aactcgtacc gaccatttgg gtcatggtga aattgctcgg cgtaaacgac cactcggagg
      901 tatcgcgcat gacaccaaag atgtgccaat cgcctctgag accggagcgg ataaagccca
      961 tcaggcccat attcagcgtg atcacgaagg ttagcagcag cagcgcatat tgactgcgga
     1021 tggtcatctt accccattgc atcgggccga tttccttggc tgatctgaat aaatagagat
     1081 caatcgcagt gaccaggatc aggcaggcga tgagttgcag gaattgcgcc acggcgacgt
     1141 tgcgtaaaaa cggcgatgcc tgctccatga ccacaaagcc atagacccct aagaagattg
     1201 tcacattgaa cgcggtcacc gccatgtaga gaccttgcgc cagcttgcca cggtcacgca
     1261 gcgccagcaa aacggttatc accgcaacaa cgcagttaaa gaccagcaga taaccgacgg
     1321 tgcggaaaaa ctcagcccga tcagccggca gatcaagatg cgccggatcc atggtgatca
     1381 aggtcaccgc atattgaccg acaatgaaca ctgccaaagt gccagcgaga gaaataacaa
     1441 ctgccggggc ccggccttgc tgggagatcg gcacgatatc acttttattg ccacgccggt
     1501 agagcaagaa gctgaagaaa gttgcgagaa tgatcagatt gatcaccgcg ttcttggccg
     1561 gcatcaggcc taagaattta agcgtcggat gatattgtga gccacccatt tcgctgactt
     1621 cctgaccagt tagcggcaga ttgtgcggtg tcagccagac ggcaaaggaa acgcagagcg
     1681 caaacaatat atatttgatg tatttgtaat agcgatccga gcctggtatc cgggtcatgc
     1741 cactccagag atagtagttg gtaatcaaga atattgaacc gaccagcaac gcctggatga
     1801 taaaggtcca ggaaaagtcg ccgcccatca tgttgttacc catgacggcg ctattggagt
     1861 aaacctcgcg gccgagatag tagccagcaa agggcagcgg gatcagggcg gcaacggcaa
     1921 ccagattggc aatataaccc atccaatcgt aatgcgcttt ttcggcttgg tttttggagc
     1981 caataaattt cacggccgca taagagcctg cgaccaggcc accaaaggca aggttaccga
     2041 gcatgcggtg gaccgcaatc ggtgtcgcca agatattttc gaaggcgacc cagacatgat
     2101 cggttaaggc gccggcctca ttaacgccag ccgggctcat catgaaaccg gccatcgaat
     2161 tagccgcctg catgatcgcc gtaccaacaa cgttcaacgt aatgccgatg aagatatgcg
     2221 tgctcttgag gtccttcatc agatagaagc caatggacat cggcagcagg tagaggagcg
     2281 ccataaacac gcgtgtatcg ccacgcattt tccagccaat aatatcgaag aagaacagga
     2341 cagttacgac aaaaagcgca acgccgattg ttttgaagat catctgcagg cgagcgctgt
     2401 aaggcgtccg gttctgcatc gcattccagc cataatagta aatgtagagg gcaaaggttt
     2461 cagcaaagaa cagcagcgca tagacaaaca tgacgtcttt gaatgtgctg gccatatagc
     2521 ccatgaaagt cgggtaaagt gagaacagcg caaaagccaa cataccgcca aaggctgctg
     2581 tagtggcata agcgacactt agaagagaag taaattcata ggccagtttg tcatagcgct
     2641 ggtcattgct gcgccagccg acaatttcga taatgaccgc aaataatggc acacccagca
     2701 cgaaggcacc gaaaaacaga tgcatttgcg ccaggaacca aacaacttta cgggaatcca
     2761 atcccagaac ttggcggtag acgttggctt cctgcgccag cgctggaaaa gcgaagaaaa
     2821 taattgcaat gagcgcgccg gctattaccg cctgacgccg ccttgttttg gccaagaaaa
     2881 cgggttcacg agatgaatgc aattacctac tccgctttac gaactgaatt agctgaaaaa
     2941 aattacttgg ccttaaagga gaaattcgct gctgctttgc cgcctccctt gacggtgatt
     3001 ttggatttta taacaccaag gcgcgggtgc caggctttga ccgtgtattt accagctgga
     3061 acgttatcca aagaataggt gccgtcatct ttaaccacga ctgcatacgg attttttggc
     3121 gccatcatga aaccgaacat gaagttatga gcttcacagt tgattgagat ataaggcgag
     3181 cggcggggtt tcaaatcctg cttgatatcg cctggatcag gctgaccgaa attgaacacc
     3241 gtccgtttga cgacacgttt cttttcaacg ccaatcatct cgcgggtatt aatgttatgc
     3301 agcacgcctt tgtcactatt gcggataatc accgggcccg gttgaataac ttgcgcccaa
     3361 ggtcggaacc ggcagccttt ttgattgatc agatagttac cgcctttggg cttatcccat
     3421 ttcttgccgg ctttgatttt atggatgaaa acgaaagtgc cgcgaagtgc accgtcttta
     3481 acgtcgatcc aaacaacttc ccgttcacct ttaccacaga catccgggtt tttggtgatc
     3541 agaattttct caacgccttc ggccggaacg gtgccactaa aagtgacttt accggaaatg
     3601 ctgccaccgt ttgatacagc gcctgcttta tatttggctt ttgccgcctg ggaatcagtt
     3661 gaaataccag ttgttaaatt caagccaacc gctgtcacaa ctgcaatttt cattaagagt
     3721 ttcatgtctt cctacctctt ttaagactta ttcaaattct attgtgctaa attagacggt
     3781 ttcgattgaa acggtccttg atctagatca gatttgattg aagaaattaa ttcttttcga
     3841 cgtatattct attgcctaat attctttgaa tttatcgagc cgagaacttc aatggcgacc
     3901 tgccattcgc ggcgtcgatt ttcatcttca attacggcaa tgagtggtgg gtttgccttc
     3961 actgcaccaa tttggcgcag caattgacca gcttccagcc ggtgataacc ttcattggca
     4021 aaagcgaagt caattatccg ctcaagtgca tcatcacctt caaaagtgac aagagcttcg
     4081 gcagcggcaa gccggaccga acgttcttca tcgtcaatca attggtcaat ttgcatgatt
     4141 tcaacaccca tattgctgag cgctttgatt gcttcggttc tgatgaagct atcaccatcc
     4201 tcaagccggt gtgccagata a
//
LOCUS       DASCNL010000512         1194 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001069580, whole genome shotgun sequence.
ACCESSION   DASCNL010000512 DASCNL010000000
VERSION     DASCNL010000512.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1194)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1194)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001069580"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..745)
                     /locus_tag="QF359_06940"
     CDS             complement(<1..745)
                     /locus_tag="QF359_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HJO86681.1"
                     /translation="MNAPTLTSGDIRDTRLADAISERYLSYALSIIMSRSLPDVRDGL
                     KPVHRRLLYAMRQLKLDPDQGFKKCARVVGDVMGKYHPHGDQSIYDALVRLAQEFSVR
                     YPLVDGQGNFGNVDGDNPAAMRYTESRMTEVATALLEGIDEDAIDFRETYDGQDKEPV
                     VLPAAIPNLLANGAAGIAVGMATSIPPHNLEELCTALIHLIKFPKAIIGKLVDIIPGP
                     DFPTGGVLVEDKNVITAAYKTGRGGFRIRA"
     gene            complement(770..>1194)
                     /locus_tag="QF359_06945"
     CDS             complement(770..>1194)
                     /locus_tag="QF359_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA repair protein RecO C-terminal
                     domain-containing protein"
                     /protein_id="HJO86682.1"
                     /translation="PEIYESLFNFIVNLSEDTWLEEYVKWELDLLADLGFGLDLTSCA
                     STGQNDELIYVSPKSGQAVSTNAGEPYKDKLLALPDFLMNGLENPPEIDFNALYLGLN
                     LTGYFMGRHVFIHHNNGEPPARTRLVDRIKQKHTISNR"
BASE COUNT          310 a          299 c          295 g          290 t
ORIGIN      
        1 gcgcgcgaat acgaaacccg ccacgcccgg ttttgtaggc cgctgtaata acattcttgt
       61 cttctaccag cacaccaccg gtgggaaaat ccggtcccgg aataatgtca acaagcttgc
      121 cgattattgc cttgggaaat ttgattaaat gaataagtgc ggtgcagagc tcctccagat
      181 tgtggggtgg gatactagtc gccataccaa cggctatacc ggctgcgcca ttggctaaaa
      241 gattaggaat agccgccggt aagacaacag gctctttatc ctggccatca taggtctcac
      301 gaaaatcgat ggcatcttca tcaatacctt cgagcaacgc cgtcgccact tcggtcatgc
      361 gtgattcggt gtagcgcatt gccgccggat tatcaccgtc aacattaccg aaattgccct
      421 gtccgtcgac caagggataa cgcacggaaa actcctgggc gagccgcacc agcgcatcat
      481 aaatcgattg atcgccatgc ggatgatatt tacccatgac atcgccgacc acacgggcgc
      541 atttcttaaa gccttgatct ggatcgagct tcaactgccg catcgcatag agcagacgcc
      601 ggtgcaccgg tttgagaccg tcccgcacat caggcaaaga gcgcgacatg atgattgata
      661 aggcataaga aaggtagcgt tcgctaatcg cgtcagcgag ccgggtatcc cggatatcgc
      721 cggacgttaa agttggagcg ttcattagtg ttcccgtgta aaatcctgtc taacgattag
      781 atattgtatg cttttgtttt atgcggtcaa caagtcgtgt ccgggcaggt ggctcgccat
      841 tattatgatg gataaagacg tggcggccca tgaaatatcc ggtgagatta agacccaaat
      901 agagtgcgtt aaaatcaatc tccggcgggt tttccagacc attcatcagg aagtctggca
      961 gtgctaacag cttgtcttta tagggttctc cggcattggt cgaaactgcc tgaccggatt
     1021 ttggcgaaac ataaatcagc tcatcatttt gtccggtcga ggcacacgaa gtaagatcga
     1081 gcccgaaacc caagtcggcc agcagatcga gctcccattt aacatattct tctagccagg
     1141 tgtcttcact gagatttaca ataaaattaa aaagtgattc gtatatttcg ggat
//
LOCUS       DASCNL010000513         1782 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001070108, whole genome shotgun sequence.
ACCESSION   DASCNL010000513 DASCNL010000000
VERSION     DASCNL010000513.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001070108"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            392..>1782
                     /locus_tag="QF359_06950"
     CDS             392..>1782
                     /locus_tag="QF359_06950"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HJO86683.1"
                     /translation="MSSIAAISQQIWDMKYRFKSADGEAIDKTIDDTFHRVGTALAQA
                     ETSPEDYADEFYEALRDFRFLPAGRIMSGAGTERDVTLFNCFVMGDVPDDMSGIFESL
                     REAALTMQQGGGIGYDFSTLRPKGAAVKGVGADASGPLSFMDVWDAMCRTIMSAGSRR
                     GAMMAVMRCDHPDIESFIEAKQEPGRLRMFNLSVLVSDDFMQAVKEDATWELVFNGTV
                     YNSLPARELWEKIMRATFAYAEPGVIFIDRINRLNPISYCETIHGTNPCGEQPLPPYG
                     ACLLGSVNLSRFVTDPFTDQANLDVQELADIVTTAVRMMDNTIDISRFPLPEQEQEAK
                     TKRRIGLGITGLADALIMCNARYGSAEAVRLSETWLKTIQRAAYLASTELAKEKGFFP
                     LFDKSAYLASEALKNIDEDIREAIEAHGMRNALLTSVAPTGTISLFADNVSSGLEPVF
                     SFAYTRHVMMPDG"
BASE COUNT          432 a          428 c          449 g          473 t
ORIGIN      
        1 aatttcttcg ttgcaaatta atttagattc ctttcatatt aaatttacag gtataaggaa
       61 aatagctggt ttctgtatcg tcaaatttag ttaaatcacg ttcattttcg tgaaatcaac
      121 caatccatta tctgctccgg accccggacc acctgaacga gacatctata gtttttccac
      181 tcactcgctt cacaacctgc ctgtgaattc cgcctaaaac agtataaagt attaaaaaac
      241 aattcgttag gcagatataa aatggtgggt aaatttttaa ttacggggga aacaaaacaa
      301 gaacttttct tgaccatgga tgcagtttac cgctacactg agcacctaaa aatatactga
      361 attttaaccg ggaccaggaa agacattcaa aatgtcgtca attgccgcaa tttctcagca
      421 aatttgggac atgaaatacc gcttcaagag cgctgatggt gaagcaatcg acaaaacgat
      481 tgacgacacc tttcaccgtg tcggtactgc gctggcccaa gccgagacca gcccggaaga
      541 ttatgctgac gagttttatg aggcgctgcg tgatttccgt tttttgccgg ccggacgcat
      601 tatgtcgggc gctggtactg aacgtgatgt gacgctgttt aactgttttg tcatgggcga
      661 cgttcctgat gacatgtcag gcatatttga aagcctgcgg gaagcggcgt taacgatgca
      721 gcagggcggc ggcatcggct atgatttttc aaccttgcgg ccgaaaggtg cggcggtcaa
      781 aggtgtcggc gcggatgcct cgggtccgct gtcctttatg gatgtctggg acgccatgtg
      841 ccggaccatt atgagcgccg gttcgaggcg cggtgcgatg atggcggtga tgcgctgtga
      901 ccatcctgat attgaaagct ttattgaggc caagcaggaa cccggccggc tccggatgtt
      961 taacttatcc gttctggtga gcgatgattt catgcaggcg gtcaaagaag atgctacctg
     1021 ggagctggtc tttaacggca ccgtctataa cagcttgccg gcccgcgaat tgtgggaaaa
     1081 aattatgcgg gcgacttttg cctatgccga gcccggcgtt atttttatcg accgtatcaa
     1141 ccggctcaat ccgatctctt attgtgaaac cattcacggc accaatccgt gtggtgaaca
     1201 gccgctaccg ccttatggcg cctgtttgtt gggctcagtc aatctctccc gctttgtcac
     1261 tgatcctttc accgatcagg ccaacttgga tgttcaggaa ttggctgaca tcgtcacgac
     1321 ggcggtgcgg atgatggata acaccattga tatctcgcgc tttccgctgc ccgaacaaga
     1381 acaggaagcc aaaaccaagc gccgtattgg cttaggtatt acaggactcg ccgacgcttt
     1441 gatcatgtgc aatgctcgtt atggctcagc tgaggcagtt cgcttgagcg aaacctggct
     1501 gaaaaccatc cagcgcgcgg cttatttagc gtcgactgaa ttggctaagg aaaaaggttt
     1561 tttcccgctt tttgataaat ctgcttatct cgccagtgaa gcgcttaaaa acattgatga
     1621 agatattcgg gaagccatcg aagcgcacgg catgcgcaac gctttgctga cctccgtggc
     1681 accgaccggc accatttcgt tatttgctga taacgtctcg tccggcttgg aaccggtgtt
     1741 tagttttgcc tatacccgcc atgttatgat gccggatggc ag
//
LOCUS       DASCNL010000514         2726 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001074930, whole genome shotgun sequence.
ACCESSION   DASCNL010000514 DASCNL010000000
VERSION     DASCNL010000514.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001074930"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="QF359_06955"
     CDS             complement(<1..494)
                     /locus_tag="QF359_06955"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HJO86684.1"
                     /translation="MWVFVRQLAVYLHPLEITFFGTFFGFLFFLPVVFRYGFGVFTTK
                     RVIHHFYRGCVNGMAILAWFVALTLLTLADASALNLLAPLCVSVGAVIFLQEHMGPRR
                     WFALALGVAGALVVIRPGFEEVSLGVGLVMITVFASAGQRVFAKSLIATDSSTTCVLY
                     LTLF"
     gene            complement(587..1933)
                     /locus_tag="QF359_06960"
     CDS             complement(587..1933)
                     /locus_tag="QF359_06960"
                     /inference="COORDINATES: protein motif:HMM:NF024877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HJO86685.1"
                     /translation="MSLFKFKFRPPHLGKYPMEQVKRVDKPTTRIDTDKVKRVPLRAA
                     FFTRPIFGDLGEKVKEERARFINKNPLSEAIGEVMQAMIPLHEGPVAEEKAPYTDDPE
                     LIAKHIKSLAYFLDMDIVGICEVPDYAWYTHDGKGNPVEARHKYALVCLIDQGYETME
                     GASGDDWISGTQSYRAYLRGAEVGSVIAGYIRKLGFDARCHSAPSGQVQQIPLMLLAG
                     LGELSRIGELVLNPFIGPRSKTVVVTTDLPMECDKPIDFGLQKFCDNCFKCARECPCN
                     AIPFGPKIMYNGYEIWKPDVENCAKYRITNPKGSACGRCMKTCPLNKVVTKDGPLMQR
                     AASWLGINAMWLKPIMVPIAVWLDDVMGNGTRVKDQKWWLDIESLDGKIIKARGVNTR
                     DIDVKKKWPKTNKVALYLPEDHPPGDSKEPFPNDRKAALAKGDEALKPENSPVNAP"
     gene            complement(2160..>2726)
                     /locus_tag="QF359_06965"
     CDS             complement(2160..>2726)
                     /locus_tag="QF359_06965"
                     /inference="COORDINATES: protein motif:HMM:NF014910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HJO86686.1"
                     /translation="PTLFLEFHGSEAGVKEQAERMAEICEEFGSGNFSWTRNAEERDK
                     LWAARHDAAYSAIALRPGCAVMATDVCVPISRLAECIMTAKQDIDEAGIVAPIVGHVG
                     DGNFHVELLIHPDTREEDLRICNEINRKLVERAIAMDGTCTGEHGIGQGKIKYLEAEH
                     GDAVDIMRTIKMALDPQNIMNPGKIIKL"
BASE COUNT          704 a          729 c          630 g          663 t
ORIGIN      
        1 ataaataaag tcagatagag cacgcaagtg gtcgaactgt cggtggcaat gagtgatttt
       61 gcaaacaccc gctgaccggc gctggcaaag actgttatca ttaccagccc aacaccgaga
      121 ctaacttctt caaatcccgg ccggatcact accagggctc ctgcgacacc gagggccaac
      181 gcaaaccaac gccgggggcc catatgttct tgcagaaaaa tcaccgcccc aacgctgaca
      241 cagaggggcg ctaacaaatt gagtgccgaa gcatcggcta aagtcagcaa tgttagcgct
      301 acaaaccaag caaggatggc cattccatta acgcatcctc ggtaaaaatg gtgtatcaca
      361 cgtttggtcg taaagacccc aaaaccgtac ctaaacacca ctggtagaaa aaacagaaaa
      421 ccaaaaaagg tgccaaaaaa ggtgatctca agcggatgca aatacaccgc caattgacgg
      481 acaaaaaccc acatgatggc cagaattccg gaagatgtag ctgcccacag aacagccgta
      541 attccttgca gggaaaacaa tttagcaaac acgtagggtt tgaccgttaa ggcgcattaa
      601 ccggtgagtt ttcaggttta agcgcctcgt cacctttggc aagcgccgcc ttgcggtcat
      661 ttggaaatgg ttctttacta tcgcccggcg gatgatcttc cggtagataa agcgcaactt
      721 tgttggtctt gggccatttc tttttgacat caatgtcgcg cgtattgacg ccgcgggctt
      781 tgataatttt accgtcgaga ctttcaatat cgagccacca tttctggtct ttaaccctgg
      841 tgccgttgcc catcacatca tctagccaga ccgcaatcgg gaccatgatc ggcttcaacc
      901 acatggcgtt gataccgagc caactcgccg cccgctgcat cagcggccca tccttagtga
      961 caactttatt gagcgggcag gttttcatgc aacgcccgca agccgagcct ttaggattgg
     1021 tgatgcggta cttagcacaa ttttcaacat ccggcttcca aatctcatag ccgttataca
     1081 taatctttgg gccgaacggg atagcattac acgggcattc acgggcgcat ttgaaacaat
     1141 tatcacaaaa tttttgcagg ccaaaatcga tcggtttatc gcattccatc ggcagatcag
     1201 tagtgacgac cacggttttg gaacgcggcc cgataaatgg attaagcacg agctcgccaa
     1261 tccggctgag ctcacctaag cccgccagca acatcaaggg gatttgctgt acttggccac
     1321 tcggcgccga atggcagcgc gcatcaaaac cgagtttccg aatatagccg gcaatcacac
     1381 taccgacttc agctccacgt aaatacgccc ggtagctttg ggtgccgctg atccaatcgt
     1441 cgccactggc cccttccatg gtttcgtaac cctgatcgat caggcagacg agagcatatt
     1501 tatgtcgcgc ctcgacagga ttacccttac cgtcgtgggt ataccaggcg taatcaggga
     1561 cttcgcaaat accgacgata tccatatcca aaaaataagc gagcgacttg atgtgcttgg
     1621 ctatcagttc aggatcatcc gtataagggg ctttttcctc ggcgaccggc ccttcatgca
     1681 gcgggatcat cgcctgcatg acttcgccaa tagcttccga cagcggattt ttattgataa
     1741 accgcgcgcg ttcctctttt actttttcac caagatcacc aaagatcggc cgggtaaaaa
     1801 aagccgccct gagtggcacg cgtttaactt tatcagtatc aatccgcgtc gttggtttat
     1861 caacccgttt gacttgctcc atcggatatt tgcccaaatg gggcgggcgg aatttaaatt
     1921 taaagaggct catgatccct gcctaatttt ttctgattgc aattatcaga ggctatcaca
     1981 agagattacc cctcgccaac attgttgggt gggtgaacca tttaattatc gggcataaga
     2041 aaaggcccgt gattgaagtg ggcttttttt ggggggggta tttagcagga gtaacttggc
     2101 tattatagtc tcacaatctt ctaaattata cagtgatcta gatcacatcc cttaacctat
     2161 tataatttaa ttatttttcc aggattcatg atgttttgcg gatcgagcgc cattttaatg
     2221 gtccgcataa tgtccacagc gtcaccatgt tccgcctcaa gatactttat ttttccctgg
     2281 ccaatgccgt gctcaccggt gcaggtgcca tccatggcaa tggcacgctc gaccagtttg
     2341 cggttgatct cattacagat gcgtagatct tcttctcgcg tatccggatg gatcagtagc
     2401 tcaacatgga agttaccatc accgacatga ccaacaatgg gggcgacaat accagcttca
     2461 tcaatatcct gcttggctgt cataatgcat tcggcgagcc tggagatcgg cacgcataca
     2521 tccgtcgcca tcaccgcaca gccgggtctc aacgcgatgg ctgaataggc agcatcatgg
     2581 cgggcggccc agagtttatc gcgttcttcc gcattgcggg tccacgagaa attaccactg
     2641 ccgaactctt cacagatttc cgccatccgc tcggcctgtt ctttgacgcc cgcctcagaa
     2701 ccatgaaatt caaggaacaa agtcgg
//
LOCUS       DASCNL010000515         2633 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001076799, whole genome shotgun sequence.
ACCESSION   DASCNL010000515 DASCNL010000000
VERSION     DASCNL010000515.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001076799"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(34..741)
                     /locus_tag="QF359_06970"
     CDS             complement(34..741)
                     /locus_tag="QF359_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007674967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HJO86687.1"
                     /translation="MRNQNPFRYFKTSPEIIRLAVMMYIRFPLSLRNIEDLLHERGID
                     ICHETVRYWWNRFGPMFAREIRKKRIHPSANYSNWRWHLDEVFVKINGETHYLWRAVD
                     HEGEVLEAFASKRRDRKAALAFLKKIMKRYGRPRAIVTDRLRSYRSAMKSIGNNQIQE
                     VGRWLNNRCENSHLPFRRREYAMLRFRHMRSLQKFVSIHSSVFNHFNKERHLNSRETY
                     KVQREAALVEWQQLCAA"
     gene            complement(738..1100)
                     /locus_tag="QF359_06975"
     CDS             complement(738..1100)
                     /locus_tag="QF359_06975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86688.1"
                     /translation="MAQIQGTTDRKQIENELKASEERFHTSFEYAAIEMAMEKFGQVR
                     CKKGINNEGTGLSLPLVKSLVKNHGGKLVLNSIVGEGIVRLKPALTTPAHFHNLWDST
                     VRGNVSLTELFHFHNVLE"
     gene            complement(1223..1846)
                     /gene="wrbA"
                     /locus_tag="QF359_06980"
     CDS             complement(1223..1846)
                     /gene="wrbA"
                     /locus_tag="QF359_06980"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003955 - NAD(P)H dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HJO86689.1"
                     /translation="MSKILVLFHSWTTHVYKLAESVAEGATAVDGIEVVLKQVPEIVP
                     ESVLERGKAVEGRKTFAHIPEASVEELPDYDGFAFGTPTRFGNMSTTMRSFLDQTGLY
                     YAQGTLIGRPATVFCSTGTGGGLETTITSFWNTLAHHGMTIVPLGPRTSATKDMTGAN
                     GGSPYGASAYAAGSPPRPSEIELEAARVQGRGLAEIVGVMKSYRWQI"
     gene            complement(1843..>2633)
                     /locus_tag="QF359_06985"
     CDS             complement(1843..>2633)
                     /locus_tag="QF359_06985"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO86690.1"
                     /translation="SKLISAKLKTLWLLAMLEIRNLSAGFGKVDVLRGIEFHVEAGEL
                     IALLGPNGAGKSTLMKSIIGVGIHHRQGEIMLDGENIIAASSHDIIGRGLAIVPEGRM
                     ILAPMTVEDNLRLGATRLNRSQGHSLAEMFEYVFDLFPRLHERSDQIAGTLSGGEQQM
                     LAIGRALMSAPRILLLDEPFLGLAPIVVQEILDALTMLKEAGLTQVLVEQKLDIALAL
                     ASRAYVLIKGEVALMDTVKSLAARKDLDNLYFALASVRETEEIS"
BASE COUNT          648 a          683 c          595 g          707 t
ORIGIN      
        1 aactcgtctc agtatggcat tgataagcca attttatgca gcacagagtt gctgccactc
       61 aacaagagca gcttcacgtt gaaccttata tgtttctcta gaatttagat gacgttcttt
      121 gttgaagtga ttgaaaaccg aagagtgaat tgagacgaat ttctgtaaac ttcgcatgtg
      181 tctgaaacgt agcatcgcgt attctcgtcg tcgaaacgga agatgagaat tctcacaacg
      241 attattcaac catcgcccaa cttcttgaat ctggttgttg ccaatcgact tcatggcaga
      301 acgatatgac cgcaatctat ctgtgacgat tgcgcgtgga cggccatatc gtttcataat
      361 tttcttcaaa aaagccaagg ctgccttacg gtcacgcctc tttgatgcaa aggcttccag
      421 tacttcacct tcgtgatcaa ccgcccgcca aaggtaatgg gtttcaccat taatcttcac
      481 aaatacttca tccaggtgcc atcgccaatt tgaatagttg gctgaaggat ggatacgttt
      541 cttacgtatt tcacgagcaa acatgggtcc aaaccggttc caccaatagc gaactgtttc
      601 atggcaaata tcgataccgc gttcgtggag cagatcttcg atgtttcgaa gtgacagcgg
      661 aaaccgtatg tacatcatca ctgctaggcg gatgatctca ggtgatgttt tgaaatagcg
      721 gaatgggttc tgatttctca ttccagaacg ttatgaaaat ggaacagctc ggtcaaagaa
      781 acgtttcctc tgacagtgct atcccacaag ttatgaaaat gcgccggtgt ggtcaaagct
      841 ggttttagtc tgacaatgcc ttcgccaaca atactattta aaaccaattt gccaccatga
      901 ttcttaacaa gacttttgac cagtggtaag ctgagaccag tgccttcatt gttgatacct
      961 tttttgcacc taacctgacc aaatttctcc attgccattt ctatggcggc gtactcaaat
     1021 gaagtgtgga atctttcttc actggcttta agttcatttt caatttgttt gcgatctgtg
     1081 gtgccttgaa tttgtgccac agtaaattgg gaagcacctt catttccttt gaagacgatt
     1141 ggttctaatc attttttcaa atgaattctg ctttcctttt gaaggggaaa tatcaattgt
     1201 tgtcgatcga ggccatcagg ctctagattt gccagcgata actcttcatg acaccgacga
     1261 tttccgccaa tccacggccc tgaacccgtg cggcttccag ttcgatctca ctgggccgag
     1321 gcggcgatcc tgcggcatag gcgctggcac catagggcga tcctccgttg gccccggtca
     1381 tatccttggt agctgaggtt ctgggcccaa gcggtacgat ggtcatgccg tgatgagcca
     1441 gggtattcca aaaactggtg atggtggtct ccagaccgcc gccggttccc gtgctgcaga
     1501 atactgtcgc cgggcggcca ataagtgttc cctgggcgta ataaagtccc gtttgatcca
     1561 ggaaggagcg catggtagtg ctcatattgc cgaaccgggt cggtgtgcca aaggcgaaac
     1621 cgtcatagtc tggcagttcc tcgacgctgg cctcagggat atgggcaaat gtttttcgcc
     1681 cttccacggc cttgccgcgc tctaacactg attcgggcac gatttccggc acctgtttta
     1741 aaaccacctc gatgccgtcc actgccgtag caccctcggc aacactttcg gccagcttgt
     1801 acacatgggt cgtccaactg tgaaacagca ccagtatctt actcatgata tctcctcagt
     1861 ttcccggacc gaggccaagg cgaagtacaa attatccaaa tcctttcggg ccgccaggct
     1921 ttttacagtg tccattaaag cgacctcacc cttgatcaga acgtaggccc gtgatgccaa
     1981 agccaaggca atatccaact tttgttcaac cagaacctgt gtcaggcctg cctccttgag
     2041 catcgttagc gcatcgagaa tttcctgcac gacgatcggt gctaagccta agaacggttc
     2101 atccaaaagt aaaatacgcg gtgctgacat caacgcccgg ccgatggcaa gcatttgttg
     2161 ctcgccgcca gacaaagtac cagcaatctg atcgctgcgt tcgtgcagtc ttggaaacag
     2221 atcgaaaaca tattcgaaca tttcagccaa actgtgacct tggctgcggt ttaatcgcgt
     2281 tgcacctagc cgcaaattgt cctcaactgt catcggtgcc aaaatcatgc ggccttctgg
     2341 aacgatggcc aagccacggc cgataatatc gtggctggaa gcggcgataa tattctcccc
     2401 atccagcata atttctccct ggcggtgatg tatgccgact ccgatgatgc ttttcatcag
     2461 agttgatttc ccggcaccat tcggtcccag taaagcgatt agctcacccg cttcgacatg
     2521 gaactcgata cctctcaaca cgtctacctt accaaatccg gcgcttaaat ttctgatttc
     2581 aagcatcgcc agcaaccaca atgttttcag ttttgccgag ataagcttcg acg
//
LOCUS       DASCNL010000516         1305 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001078184, whole genome shotgun sequence.
ACCESSION   DASCNL010000516 DASCNL010000000
VERSION     DASCNL010000516.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1305)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1305)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001078184"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="QF359_06990"
     CDS             <1..1039
                     /locus_tag="QF359_06990"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86691.1"
                     /translation="GWAAPSWPVEHGGPGWTPTQKYIFQEELGLSAAPMPPPFGTGMI
                     GPVLIAFGNDAQKTEYLPRILNGDDWWCQGYSEPDSGSDLASLRTIAVPDDDHYVVNG
                     QKIWTSYAQYADRMFCLVRTDDSVKPQAGISFLLIKMDTPGITVRPIISQDNDHTLNE
                     VFFEDVRVPIKNLVGEAGQGWTYAKFLLGHERSSIGDIAGSKRSLTRLKKIAAAEISG
                     GQPLSEDSAFSRKLTDLDVRLMILEVTQFRLLADEEAGNDIGPAASILKIKGSELSQL
                     ISETAVEAIGYYGMPYVHEAVQPGGNEHAVGPNYTTGILPDYLFLRALSILGGTNEIQ
                     RNILAKTALRF"
     gene            1049..>1305
                     /locus_tag="QF359_06995"
     CDS             1049..>1305
                     /locus_tag="QF359_06995"
                     /inference="COORDINATES: protein motif:HMM:NF014790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86692.1"
                     /translation="MDFTLNEEQQLLKNSAERFVEQDYGFERRREIIASPDGFNREVW
                     AQMAELGWLGLPFSEEDGGYDGTPVETMILMEAIGCGLMVEP"
BASE COUNT          300 a          319 c          369 g          317 t
ORIGIN      
        1 gggctgggcg gcaccgagct ggccggtaga acatggcggc cccggctgga cgccaactca
       61 gaaatatatt ttccaggaag aactcggcct ttctgctgcg ccgatgccgc cgccttttgg
      121 cactggcatg atcgggccgg tattgatcgc cttcggtaac gatgcgcaaa aaaccgaata
      181 tttgccgcgt atcttaaacg gtgacgattg gtggtgtcag ggctattctg agccggattc
      241 aggctctgat ctggcttcgc tgcgaactat agcagttccc gatgacgacc attatgtcgt
      301 taacgggcag aaaatctgga cttcctatgc tcagtatgcc gaccgcatgt tctgtctggt
      361 gcgcaccgac gactccgtca aaccgcaagc cggcatctca tttttgctga tcaaaatgga
      421 tacccccggc atcacggtgc ggccaattat ttctcaggat aacgatcaca ccttgaatga
      481 agtgtttttc gaggacgtcc gggtaccgat caaaaatctt gtcggcgaag ccgggcaggg
      541 gtggacttac gctaaattct tacttggcca tgagcgtagt tctatcggcg atattgctgg
      601 ctccaagcgg agtcttaccc ggttgaaaaa aatcgctgct gctgaaatat caggcggcca
      661 gccgctcagt gaagactcgg cttttagccg caagttgacc gatctggatg ttaggctgat
      721 gatcctggaa gtgacacagt ttcgtctgct ggccgatgag gaagcaggta atgatatcgg
      781 tccagcggct tcaattttaa aaatcaaagg ttccgaactg agccaattaa ttagcgaaac
      841 agcagttgaa gcgattggtt attacggcat gccctatgtt cacgaggccg tacagccggg
      901 cggcaatgag catgccgttg gtcccaatta cacgaccggc attctgcctg attatctgtt
      961 tctgcgcgcc ctcagtattc ttgggggcac taatgaaatt cagcgcaata ttttagctaa
     1021 aacggcgctt aggttttagg cggcggcgat ggattttact ctcaacgagg aacaacaact
     1081 ccttaaaaat agtgccgaac gctttgttga gcaggattat ggcttcgaga ggcggcgtga
     1141 aatcattgcc agccccgacg gcttcaaccg cgaggtttgg gcgcaaatgg cggagctcgg
     1201 ctggcttggc ctgccgtttt cagaagagga tggcggctat gacggcaccc cggtggagac
     1261 catgatattg atggaagcga taggttgtgg gctaatggtt gagcc
//
LOCUS       DASCNL010000517         1153 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001078692, whole genome shotgun sequence.
ACCESSION   DASCNL010000517 DASCNL010000000
VERSION     DASCNL010000517.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001078692"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(615..1040)
                     /locus_tag="QF359_07000"
     CDS             complement(615..1040)
                     /locus_tag="QF359_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011906133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HJO86693.1"
                     /translation="MKARVKWVQDRTFLGESGSGHSMVMDGDPAGGGRDLGIRPMEAM
                     LLGMGGCTAYDVVEILEKSREDVADCAVELEAERAEDIPKVFVKIAVRYIVTGRNLDP
                     KKVERAVNLSAETYCSATIMLGKTAEVSHEIEIIDTAKS"
BASE COUNT          311 a          283 c          240 g          319 t
ORIGIN      
        1 cgaattacca tctttttgat aggaaatgac acgcatttcg tatttccttt attttattta
       61 ttttaaagtt ggcaaacaat tctcagaaaa atcccttaag agtcaagggc ttccaaagta
      121 ttaacggagg ggcattcaat tttcatggta gctatgcaaa atttgcaagg gtaatttgaa
      181 tcggaaatcg cctataacat cagttatata tcctggcacg accaggcgcg gcaataaaat
      241 agaaaatatt taaggcgctg tgatgttgct aattgcccga ccaaacggtc cttccgggga
      301 ggaacggaat ttccgtttat tggttaataa taaagatgga gagagatcca tggcctctcg
      361 ttcggaaatg aacaagaaac cgcaatcgga taaattgatt gctaaacgcc gtaagtgcct
      421 aatgtgtacg gacgaatttc agtccagcca tattggcgag cgcgtgtgcc cagactgcaa
      481 aggcacgtct acctggcgcc aaaccggcat cgcaatctag tattaggctc gaccacgtat
      541 tttcatacat gtagtttaat atctgatttt aaataaaggg acgctagata tggcgtccct
      601 ttaattttgc gcttttaact cttcgccgta tcgataattt caatttcatg actgacctcg
      661 gccgtcttgc cgagcatgat ggtcgctgaa caataggtct ctgccgatag attaaccgcc
      721 cgctcgactt tcttgggatc gagattccgt cctgtgacga tatagcgcac agctattttg
      781 acaaaaactt tggggatatc ttcggcccgt tccgcctcaa gctcgaccgc acaatcagcg
      841 acatcctcgc gggatttctc cagtatttcg acaacgtcgt aggccgtaca gccgcccatt
      901 cccagcaaca tggcctccat cggccgaata ccgagatcgc ggccaccccc tgccggatca
      961 ccatccataa ccatcgaatg gccgctgcct gattcgccta ggaaagttct atcctgaacc
     1021 catttaacgc gcgctttcat aatatcatct ctattccatg atgttgcagg agccctaagt
     1081 gtaactggta attccacaga acgaaatcac cttacttttg ggctttaact tacctcaata
     1141 tttagctctt ata
//
LOCUS       DASCNL010000518         2347 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001079630, whole genome shotgun sequence.
ACCESSION   DASCNL010000518 DASCNL010000000
VERSION     DASCNL010000518.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001079630"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="QF359_07005"
     CDS             complement(<1..419)
                     /locus_tag="QF359_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86694.1"
                     /translation="MSEFSPAAVPFVGICILFSAELFLNAIVIGILLGGFYAALSIGL
                     SISFGLLDIVNIAHPAFIILGAFVCFIFNSHYGFDPILIGIIFAPAFYVLGTLIYRIY
                     YESFEKTGAEALRGLAFFFGVMFIIEVILIMSFGVDF"
     gene            complement(450..1715)
                     /locus_tag="QF359_07010"
     CDS             complement(450..1715)
                     /locus_tag="QF359_07010"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HJO86695.1"
                     /translation="MKSFKLPVFRSLVTAFAVVTFALIGSEVPAKEPVKIGFSMALTG
                     PLAGGGKQALVAMEMWRDDINSKGGILGRPVQLKYYDDQTKAANVPGIYAKLLDVDKV
                     DFVVSGYGTNLIAPALPVVIQRELVFMGLFGMNNNKKWKYDKYFQIMPSGPDPAVGFS
                     KAWFDTVMQLKPTPKSIAFVAADAEFAKNLKKGAVTNAKRLGLKITYNKNFKPGTPDF
                     TPIIRAVNATNPDLFFVASYPPGSAGMTRAVSEVGTKVRGFGGGMVGLQFSGIMKGLG
                     PKLNGVLNYDFYVPEPNMNIYPGVKSLLKRYQKVASARKVDPLGFYLAPWAYAYVQVL
                     GDAINAVGKIDHAAIAKYIHATEFTTVVGKVKFGSNGEWAKERTIAVQWQNIKKKNDL
                     QQFTQPGIRKIMAPAAFATGKIKPFNALR"
     gene            complement(1841..>2347)
                     /locus_tag="QF359_07015"
     CDS             complement(1841..>2347)
                     /locus_tag="QF359_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO86696.1"
                     /translation="FQSELVVTRHYVPKAFPFAFTNGVQASYLEVDTETGIIKLLDHW
                     MVEDCGTVINPQLVDEQVRGGIVQGLGGALFEECLYSSDGQFLNGSMADYLVPMAAEM
                     PDIKVGHVESPTADSELGAKGAGEAGTAGAPAAVMNAVNDALKPLGTKVTRQPFTPQR
                     VLEALGKV"
BASE COUNT          683 a          608 c          480 g          576 t
ORIGIN      
        1 tggaaatcaa cgccaaaact catgatcaga atgacttcta ttatgaacat aacgccaaag
       61 aagaatgcca aaccgcgcag agcctcagcg ccggttttct caaagctttc gtaataaatt
      121 cggtaaatta atgtgccaag tacataaaat gctggcgcaa agattattcc tatcaatata
      181 ggatcgaaac cataatgaga attaaagata aaacagacaa atgccccgag tataataaaa
      241 gcgggatggg caatgttcac aatatcaagc agcccaaacg atatagaaag cccgatgctt
      301 aaagcggcat aaaatccccc aagcaatata cctatgacaa tggcgttaag gaataattcg
      361 gcagaaaaca aaatacaaat tccaacaaaa ggaacggcag cgggcgagaa ttcactcacc
      421 cgctaccatt tacataaaaa gaacagaaat taacgcaaag cgttaaacgg cttaatcttg
      481 ccagtcgcaa acgcagccgg cgccatgatc ttgcggattc ccggctgtgt gaattgctga
      541 aggtcattct ttttcttaat attctgccat tggaccgcga tagttctttc cttcgcccat
      601 tcaccattgc tgccaaactt aaccttaccg acaacggtgg taaactcggt cgcatgaata
      661 tacttagcga tcgcagcgtg gtctattttt cctaccgcat taatagcatc acccagtacc
      721 tgcacataag cataagccca aggggctagg taaaacccta gtgggtcaac cttccttgca
      781 gacgcgactt tttggtatct ctttagaaga ctcttaacac cgggataaat gttcatattc
      841 ggctcaggaa cgtagaaatc atagtttagc accccgttca atttcgggcc aagacccttc
      901 atgataccgg aaaactgcaa tccaaccatt cctccgccaa aaccccttac cttcgttccc
      961 acttcactaa ctgcacgggt catccccgct gaacctggag gatatgaagc aacgaagaaa
     1021 agatcgggat ttgtcgcgtt aaccgcgcgg ataatcggtg taaaatccgg cgtcccgggc
     1081 ttgaagttct tgttataagt aatttttaga ccaagtcgct ttgcgttcgt gacggcacct
     1141 tttttaaggt tttttgcaaa ctccgcatct gctgcaacaa acgctataga tttaggtgtc
     1201 ggttttagtt gcatcaccgt atcaaaccac gcctttgaga agccgacagc ggggtccggt
     1261 cctgacggca taatctggaa gtatttatca tacttccatt ttttgttgtt attcatgcca
     1321 aaaagaccca taaaaactaa ctctctctgg atcacaacgg gtagcgccgg cgctatcagg
     1381 ttagtaccat agccggatac gacaaaatca accttatcta catccagcaa tttagcataa
     1441 atacctggta cgttagctgc ttttgtttgg tcgtcataat atttaagctg caccggacgg
     1501 ccaaggatgc cgcccttact gttaatgtcg tctctccaca tttccattgc caccagggcc
     1561 tgtttgccac cgccggcaag ggggcccgtc agagccatac tgaacccgat cttgacgggt
     1621 tcttttgcgg gaacttcaga cccaatcagt gcaaaagtaa caactgcaaa ggctgttacc
     1681 aaggaacgga aaactggcaa tttaaagctt ttcattttat cctccctaaa aaaaattaga
     1741 caaactcaat tatcgtaaga acgtcaaact cgcagcgtct caatcaaaat ccacctcaac
     1801 agcagtctac atagcagttg ccgcatagat caaggcttaa tcatacctta cccagagctt
     1861 ccaatacccg ctgtggcgtg aaaggttgcc gtgttacttt ggtccctaat ggctttagtg
     1921 catcattgac agcgttcatg accgcggccg gagcaccggc ggtacctgct tcaccggcgc
     1981 ctttggctcc aagttcggaa tcagcggtcg gtgattcaac atgaccgact ttaatatccg
     2041 gcatttctgc tgccatcggc accaaataat cggccatgga gccattcaga aactgcccgt
     2101 cggaactgta aagacattcc tcaaaaagtg caccgcccag cccttgaacg ataccacccc
     2161 gcacctgttc atcgacaagc tgcggattga tcacggtacc gcaatcctct accatccaat
     2221 ggtcaagcaa tttgataata cccgtttcgg tatctacctc cagatatgac gcttggaccc
     2281 cgttggtaaa agcgaaagga aaagccttcg gtacgtagtg gcgggtaaca actaactccg
     2341 actgaaa
//
LOCUS       DASCNL010000519         1730 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001081197, whole genome shotgun sequence.
ACCESSION   DASCNL010000519 DASCNL010000000
VERSION     DASCNL010000519.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001081197"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            167..1579
                     /locus_tag="QF359_07020"
     CDS             167..1579
                     /locus_tag="QF359_07020"
                     /inference="COORDINATES: protein motif:HMM:NF013871.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HJO86697.1"
                     /translation="MIEDLLEYIEGPARWTVTALALMVFLFLVARRKLFEGPAKLVDI
                     IVKWRKKPGGQILVEPWMETPEIKAVLAAITKNGKEARFIGGCVRDALLKKPVTDIDI
                     ATPETPDQITSLLENAGIKAVPVGIEYGTVMAVINRQSFEITTLRKDIKTDGRHAEVE
                     FTEDWRQDAARRDFTFNTISATPDGMIYDYFNGIQDLADQAIRFVGRAPERIDEDRLR
                     ILRYFRFIATLGMRGESKMEFQACIDRAPALKELSAERIKSELFKILDSTMQLDVVAL
                     MYNHGVLKVILPYVTSPERLRQLAWLETSAIKFECVRPDPLRRLAALVATDEQGTVEI
                     TEALKLSNAEHQRLTSMIAPQWEADWQISNDDLRATLYRVGAATVIDLVLLEWAGMLV
                     ASSTGLGEVQDGWVRIIDTADQAGGYITFPLKGQDVLDLGVAPGPEVADLLGQVEEWW
                     QAEGCHANREACLEKLAALL"
BASE COUNT          432 a          414 c          478 g          406 t
ORIGIN      
        1 tggttgttgg ctttgtgcta accgctatgt cactgattta tctaacgact ttgggtgacg
       61 atatcgacgg tcaatatcaa tcacccctga tcgaagatgg caaggtggta ccgggtcact
      121 ttaaatctaa ataaaacaac agaggccagc ggccattgaa tgagacatga ttgaagacct
      181 gctggaatat atcgaaggcc cggcgcgctg gacggttaca gcgctggctt tgatggtttt
      241 tctgtttctg gtcgcccgcc ggaaattatt tgaagggcct gccaaactgg ttgacatcat
      301 tgtaaaatgg aggaaaaagc ccggcggcca gatactagtt gagccgtgga tggagacccc
      361 ggagattaag gccgtactcg cggcgatcac caaaaacggc aaggaagcgc gctttatcgg
      421 cggctgtgta cgtgatgctt tgctcaaaaa accggtgaca gatatcgata tcgccacccc
      481 ggaaactccc gatcagataa cttcgctctt ggaaaatgcc ggcatcaagg ccgtgcctgt
      541 tggcattgag tacggcacgg tgatggcggt gatcaatcgc caaagctttg aaattacgac
      601 actccgcaaa gatatcaaga ccgatggccg ccacgccgaa gtagagttta cggaagactg
      661 gaggcaggac gcggcccggc gtgatttcac ctttaatacc ataagcgcaa ccccggacgg
      721 catgatctat gattacttta acggcattca ggatttggcc gaccaggcaa tccgcttcgt
      781 cggccgcgcc ccggaacgaa tagatgagga ccggcttaga attctccgct atttccgctt
      841 tattgccact ttaggtatgc ggggcgaaag caagatggag tttcaggctt gcatagatag
      901 ggcaccagca ctgaaagagc tttccgccga gcggatcaag tccgaactat ttaaaatact
      961 tgactccacc atgcagttgg atgttgtcgc attgatgtac aaccacggtg tgctcaaggt
     1021 tattctgcct tatgtgacca gcccggaacg cttgcgccag cttgcctggc ttgagaccag
     1081 cgcaataaaa tttgagtgtg tgcggcctga tccgctgcgc cgcttggcgg ccctggtggc
     1141 aacggatgag caaggcacgg tggaaattac cgaagccctt aaactatcaa acgccgagca
     1201 ccagcgcctg acctcgatga tcgcgcctca gtgggaggcg gattggcaga tcagcaacga
     1261 cgacctgcgc gcaacccttt atcgggtggg cgctgcgaca gtgattgatc tggtgctgct
     1321 cgaatgggcc gggatgctgg tcgcctcctc gaccgggctc ggtgaggtgc aagacggctg
     1381 ggtgcgaatt attgatactg ccgatcaggc aggtggctat atcacgttcc cgcttaaagg
     1441 ccaggacgtg ctcgatctcg gcgtcgcccc cggcccagag gtagcggatt tactcggcca
     1501 ggtagaagag tggtggcagg cagagggctg ccacgccaac cgggaggctt gtctggagaa
     1561 gctcgcagca ttgttgtaga aaaattaagg agacatgtac ttgttacacg ttggagtaat
     1621 atttataaac cataataata tgtttattaa cagatagtta taaaatttta tttggcttat
     1681 ttttatttca taaattatat ttagtaacga aattagtaac ataatccata
//
LOCUS       DASCNL010000520         1006 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001083186, whole genome shotgun sequence.
ACCESSION   DASCNL010000520 DASCNL010000000
VERSION     DASCNL010000520.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001083186"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="QF359_07025"
     CDS             complement(<1..993)
                     /locus_tag="QF359_07025"
                     /inference="COORDINATES: protein motif:HMM:NF025030.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HJO86698.1"
                     /translation="MEAYTTLFGETASDTLLEILADQDQPEAVRLSALHGLKMIANEE
                     AVQAIGQTLTSKDRQIRFDAIAALGEIAKSNASADQARAILISALNAEITPLPEEQEE
                     QKDALALYEKKVDSEAESAEDIIEKEESENEEFPTSTWAAIMGTDGPKEGRMAELGDT
                     RKNRIHLTETDMEMLALSAQTPRKSRVRLAEETPAFKDVPQFAARVLGEVPSDDVASA
                     LALNIENTSEQIRIAALDSLVRIGESRGTLPRDTIAALMRVVANSERDCRLLAVRALG
                     AAKATECADYLAHRLEDGDSFIRTEAIKALSNMGVEIMQIDQLIDDEERSVRLAA"
BASE COUNT          213 a          285 c          232 g          276 t
ORIGIN      
        1 agcggcaagc cggaccgaac gttcttcatc gtcaatcaat tggtcaattt gcatgatttc
       61 aacacccata ttgctgagcg ctttgattgc ttcggttctg atgaagctat caccatcctc
      121 aagccggtgt gccagataat cggcacattc tgttgctttt gccgcgccca gagcacgcac
      181 agccagcaac cggcaatcgc gctctgaatt cgccaccacc cgcatcaagg cggcaatagt
      241 atctcttggc agggtgcccc tgctttcacc aatccgcacc agcgaatcga gtgctgctat
      301 acgaatttgc tcactggtat tttcgatatt tagcgccagc gcggaagcca cgtcgtcact
      361 cggcacttca cccaaaaccc gggccgcaaa ttgcggcaca tctttaaaag ccggtgtttc
      421 ttcggccagc cggacacggc tcttacgcgg tgtttgagcc gacagtgcca acatttccat
      481 atctgtttcg gtcaggtgaa tccggttttt cctggtgtca ccaagctcgg ccatgcggcc
      541 ttcctttggc ccatcagtac ccataatcgc ggcccaggtc gaagttggga attcttcgtt
      601 ttcgctttcc tctttttcaa taatgtcttc ggcagattca gcttcggaat caactttctt
      661 ttcatagagc gctaatgcat ctttctgctc ttcttgttct tccggcaacg gtgtgatttc
      721 tgcattcaaa gctgaaatca aaatagcacg tgcttgatcg gcgctcgcgt ttgacttggc
      781 aatctcgccc aaagcagcga tggcatcaaa gcggatttgg cgatctttcg acgttaaggt
      841 ctggccaatc gcttgaacag cttcttcatt ggcgatcatt ttgagcccgt gcaaagcgct
      901 aagccgcact gcttccggtt gatcttgatc tgccagaatc tccagcagcg tgtcgctggc
      961 agtttcacca aataaagtgg tatatgcttc caatgcaata gcggct
//
LOCUS       DASCNL010000521         1254 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001085596, whole genome shotgun sequence.
ACCESSION   DASCNL010000521 DASCNL010000000
VERSION     DASCNL010000521.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1254)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1254)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001085596"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(248..>1254)
                     /locus_tag="QF359_07030"
     CDS             complement(248..>1254)
                     /locus_tag="QF359_07030"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO86699.1"
                     /translation="FMPLSGLLSDRYGKRRILFPSLFLFGLAGGACSLAPDQETLFFL
                     RFIQGIGASALSTLNVAMVGDFFKGPDRMRVMGFVGATQNIGSGLLPLLGGVLAAVAW
                     FYPFGVAMLAIPLGLYMNFALEEVKRENPPEKTGTRAFLGHALSQLNNRIVIELVFMT
                     GGFIFIGFGAFVRYIPLFLKDTFDSPAVLIGLIIASRSTMGVLTASQLSWLTRHFSYR
                     TLIFSSFFATSVGMAWVPFADNVWMIIFTAMCYGGAYGILRPSLQVILLEHAPEDLRT
                     TFVSALNFGLRVAQTTSPVFAGLYLIIGTYNGLYITAAVLAGLMAIYSLTAVSLRPMV
                     "
BASE COUNT          393 a          294 c          304 g          263 t
ORIGIN      
        1 atcaacattc tttaaattgt gctcgcgggc accggtgatt ttaatctctg ccatacccag
       61 atatatggac cgtgaactca gaaaaagcga gtccggatat tatttgacgc cagccgtttc
      121 gaattatgcg ccaaaatgcc tggtatagac atatttttgt gatgtacggc ggccttccgg
      181 ggtatcttga aatttcacca tctattatca aatcaacaat atttgtggtt tagaactatt
      241 aattatatta aaccatcggt cgtaatgaga cagccgttaa cgaatagatc gccattaagc
      301 cggccagcac tgctgctgta atataaaggc cattgtaagt gccaattatg agatagagac
      361 cggcgaaaac cggcgaagtg gtttgcgcca cccttaagcc gaaatttaaa gctgaaacaa
      421 aggtggtccg caaatcttct ggggcgtgtt caagcaatat aacttgtagg gaaggccgca
      481 aaataccata cgcgccacca tagcacatgg cggtaaaaat aatcatccag acattgtcag
      541 cgaaaggaac ccaagccatg ccgacggacg tggcaaaaaa ggagctgaaa attaaggtcc
      601 ggtaggaaaa atgccgggtt agccaggaaa gttgcgaggc ggttaggacg cccatagttg
      661 aacgggaggc aataatcaga ccgatcaata ctgcaggtga gtcgaaagta tcctttagaa
      721 acagtgggat atagcgtaca aaggcaccga acccgataaa aataaagcca ccggtcataa
      781 agacaagttc gatgacgata cggttgttca attgagacag ggcgtgacct aaaaaggccc
      841 tagtaccagt tttctctggt gggttttcgc gttttacctc ttccaaagca aaattcatat
      901 aaagaccaag cgggatcgcc aacatggcga caccaaaagg gtaaaaccaa gcgacagccg
      961 ccaatactcc acccagcagc ggcagtaagc cgctaccgat gttttgcgtc gcgccgacaa
     1021 agcccatcac ccgcatccgg tccgggcctt taaagaaatc gccaaccatg gcaacattaa
     1081 gggttgataa tgcgctggcc ccgataccct gaataaagcg caggaaaaac agcgtttcct
     1141 gatcaggtgc cagggagcac gcgccaccgg ccaaaccaaa aagaaatagt gatggaaaga
     1201 gaatgcggcg tttgccgtag cggtccgaca gtaagccact taacggcatg aaca
//
LOCUS       DASCNL010000522         1142 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001089055, whole genome shotgun sequence.
ACCESSION   DASCNL010000522 DASCNL010000000
VERSION     DASCNL010000522.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001089055"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..698)
                     /locus_tag="QF359_07035"
     CDS             complement(<1..698)
                     /locus_tag="QF359_07035"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO86700.1"
                     /translation="MANGAVAKQLGSELHPFIIVFFRSTLMAAIMFFLFARKGYAKIK
                     PQGHGLMMINGLVFTVATLGWFWALPRVPLDLVAAIGFTSQLYAIMGAILFLGEKSHP
                     WRWAALAVGFMGAMIIIRPGFVEMSAGVIVTIITAILYSTNRILIKIIATRDDPAVSV
                     VWQAIWASVFSLPAALLVWTLPTPTQGFWILAISVFAILSHYSLAWALRLADIGAVEP
                     TVFMRLVWGAILGY"
BASE COUNT          356 a          258 c          265 g          263 t
ORIGIN      
        1 atatagccaa gtatagcgcc ccaaactaac ctcatgaaga ctgtcggctc tacagcgcct
       61 atatcggcca gtcgcaatgc ccaggccaag ctatagtggc tgaggatggc gaaaacggaa
      121 atggcaagaa tccaaaaacc ctgggtagga gttggtaagg tccatacaag gagagctgca
      181 ggtagtgaaa acacgctagc ccaaatggcc tgccaaacca ccgagactgc tggatcgtct
      241 ctggtggcga tgattttaat taaaattcga tttgttgagt aaaggatggc ggtaataatg
      301 gttacgataa cccctgcgga catttcaacg aaaccggggc gaatgatgat catcgcgccc
      361 atgaagccaa cagctaacgc tgcccagcgc caagggtggg atttctcgcc cagaaacaga
      421 atggcaccca taatggcata aagctggctg gtaaaaccga tagccgctac caaatccagt
      481 ggcactcggg gtaaggccca aaaccatcct aatgtcgcca cggtaaagac caggccatta
      541 atcatcataa ggccatgtcc ctggggttta attttggcgt aacctttccg cgcaaataga
      601 aaaaacatga ttgctgccat cagtgttgaa cggaagaaaa cgatgataaa gggatgaagc
      661 tcactaccca attgtttggc gacggcaccg ttggccatca gggcaaggcc tgaaaaaata
      721 gcgagacaaa taccaataaa atttcccggc tctaagccaa tcctatcgga tattttattt
      781 accaatcgcg ttaaatactt gggcatagag agggtcagac tataattgtg gttggtgtaa
      841 tgtatttaat gtctgcttta aagtgagcat cagtcatttt tgtgtaccga gccatttaag
      901 gttactacgt catcaaaacg gctttaaagc acatataaac gtagcaataa acgcggcaat
      961 ttctaggaat gaaaaacaga tcaagagcag atttatctta taacccattg aaaacattgg
     1021 tgggcgatat aggattcgaa cctatgaccc gctgattaag aggcgcttga tacttaaacc
     1081 gcctcaacct gccggcgatc cactgtatta actgtaccat ttatttcagt acttaaaacg
     1141 cg
//
LOCUS       DASCNL010000523         1574 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001089153, whole genome shotgun sequence.
ACCESSION   DASCNL010000523 DASCNL010000000
VERSION     DASCNL010000523.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001089153"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="QF359_07040"
     CDS             <1..222
                     /locus_tag="QF359_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86701.1"
                     /translation="AGVTVNAIAPGYVDTDMVAAVPERVLEKIVGRIPVGRLGKATEI
                     ARTILFLTDDDAGFITGSTLSINGGQHMY"
     gene            378..1568
                     /locus_tag="QF359_07045"
     CDS             378..1568
                     /locus_tag="QF359_07045"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HJO86702.1"
                     /translation="MSHKPEIVIASAARTPVGAFSGAFSNIAAHELGSIAIAEALSRA
                     GVSAEDVSEVVLGQVLTAGVGMNPARQASMAAGIPQERTAYSINQVCGSGLRAVALGA
                     QAIIAGDSDIVVAGGQENMTQSPHVSHLRAGVKMGPTQMVDSMINDGLWDAFNGYHMG
                     ITAENVAEQWQISREQQDEFAAQSQARVEAAQNSGTFKEEIVPVTVKTRKEEIVVDTD
                     EHPRHGTTVESLAKLRPAFDKEGSVTAGNASGINDGAAALILMSADEAEKRGIEPMAK
                     IKSWATEGIDPSIMGAGPIPASKKALEKAGWSSDDLDLIEANEAFAAQACAVSKEFGW
                     GADKVNVNGGAIALGHPIGASGARVLVTLLHEMRRRNVEKGLATLCIGGGMGIAMCVE
                     RSSN"
BASE COUNT          403 a          358 c          424 g          389 t
ORIGIN      
        1 gcgggcgtta ccgtcaacgc aattgcgcca ggttatgttg ataccgatat ggtcgccgct
       61 gtcccggaac gtgttcttga gaaaattgtt gggcgcatcc cggttggccg tttaggtaag
      121 gctactgaaa tagctcgtac tatcctgttc ctcacagatg acgacgctgg ttttatcacc
      181 ggttcaactt tgtccatcaa tggcggtcaa catatgtatt aatccacaat agtcaggaac
      241 gtaaacactg cggaagctgt gcaaatacgt ttctctgatc aatttatttc ctcatcaaca
      301 ctatgaataa aaaaatataa tcgaacacca gtatatcaat aaatttagaa atattatttt
      361 attggaagga tttcaaaatg agccataaac ccgaaatcgt catcgcttcc gccgctcgga
      421 caccggtcgg tgcatttagt ggcgctttca gcaatatcgc agcgcatgaa cttggtagta
      481 ttgcgattgc cgaagcactc agccgcgctg gcgtttctgc tgaagacgtt tcagaagttg
      541 tacttggcca agttctgaca gccggcgtcg gtatgaatcc ggcgcgacaa gcttcgatgg
      601 cagccggtat tccgcaagaa cgtacggctt acagtatcaa tcaggtgtgt ggttctggtt
      661 tgcgggcggt ggcgcttggc gcacaagcga tcatagccgg cgattcagat atcgttgttg
      721 ctggtggcca ggaaaacatg acccagtcgc cgcacgtctc tcatcttcgt gctggtgtga
      781 aaatggggcc gacccaaatg gtcgacagta tgataaatga cggtttgtgg gatgcattta
      841 atggctacca tatgggcatt actgccgaaa atgttgccga acagtggcaa atctcgcggg
      901 aacagcagga tgaatttgct gctcagtctc aggcaagggt cgaagctgca cagaattccg
      961 gcacctttaa agaagaaatc gtaccagtca cggtcaaaac ccgcaaagaa gaaattgtcg
     1021 tcgacaccga tgaacatccg cgccacggca caacggttga atctcttgct aaattgcgtc
     1081 cagcctttga caaggaaggc tcagtgactg ccggaaatgc ttcaggcatc aatgacggcg
     1141 cagcagcatt gattttgatg tcggctgatg aagctgaaaa gcgtggcatt gagcctatgg
     1201 caaagatcaa atcctgggcg accgagggta ttgatccttc tattatgggt gccggcccaa
     1261 tccccgccag caagaaagca cttgagaagg ctggttggtc gagtgacgat cttgatctga
     1321 ttgaagctaa tgaagctttc gcggcacaag cctgcgccgt tagtaaagaa tttggctggg
     1381 gtgcggataa agtcaacgtt aatggcgggg cgattgcact cggtcatccc atcggggcat
     1441 ctggtgctcg tgtactggtg acacttcttc atgaaatgag acgtcgtaat gtagagaaag
     1501 gtctcgccac actgtgtatc ggcggcggta tggggatcgc tatgtgcgtg gaacgaagta
     1561 gtaattaaag gtca
//
LOCUS       DASCNL010000524         2248 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001089712, whole genome shotgun sequence.
ACCESSION   DASCNL010000524 DASCNL010000000
VERSION     DASCNL010000524.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001089712"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1205)
                     /gene="murA"
                     /locus_tag="QF359_07050"
     CDS             complement(<1..1205)
                     /gene="murA"
                     /locus_tag="QF359_07050"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HJO86703.1"
                     /translation="MDRICIQGGQPLSGTIQIGGAKNAALPLMAASLLTSETLCLSNL
                     PHLADITTMVHLLSELGVEISMNGDAPNGGHVSRVFGLSAKEPEDKTAPYELVRRMRA
                     SVLVLGPLLARWGEAKVSLPGGCAIGTRPVDLHLEGFKVLGAEIELEEGYIRAFAPNG
                     LKGARVVFPSVSVGATENVLMAASLAEGETTIANAAREPEIADLAHCLQTMGAEIEGI
                     GTDTLTVTGKSSLQGGDYQVVPDRIETGSYAVAAAITGGDITLTGTKLELVDAVADVL
                     VRAGAEVSETDDGVRITRTNGGIKGVDVMTEPYPGFPTDMQAQLMALLTVSEGASMIT
                     ETIFENRFMHVPELCRMGADINVHGASAIVRGVEKLSGAELMATDLRASISLVLAALA
                     ADGETIVNRV"
     gene            complement(1246..1389)
                     /locus_tag="QF359_07055"
     CDS             complement(1246..1389)
                     /locus_tag="QF359_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86704.1"
                     /translation="MVKQKKQPNISAAKVAKATEREKRLAEALRENLKRRKKTAKKPK
                     SGE"
     gene            1503..1577
                     /locus_tag="QF359_07060"
     tRNA            1503..1577
                     /locus_tag="QF359_07060"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1535..1537,aa:Thr,seq:ggt)
     gene            complement(1650..2129)
                     /locus_tag="QF359_07065"
     CDS             complement(1650..2129)
                     /locus_tag="QF359_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HJO86705.1"
                     /translation="MSAGEKMDKYLEDYEVGRTHELGEFTLTEEEIVEFAEKYDPRPV
                     HIDTEAARESQFGSVIASGYHVISMAMRLLVEHFISDKSGIASPGLDEIRWHAPTRPG
                     DRLRVRVTVTGVEVSKSKPDRGIVRDLVELHNQHDELVLSYRSMGMYYRAPKVIAAG"
BASE COUNT          486 a          665 c          572 g          525 t
ORIGIN      
        1 acccggttga cgatggtctc gccgtcagcg gccagcgccg ccaacaccaa agaaatagag
       61 gcccgcaaat cggtcgccat caactcggca cctgagagtt tttcaacgcc tctgacaatc
      121 gccgaagcgc catggacatt gatgtcggct cccatccggc agagctctgg cacatgcatg
      181 aagcggtttt caaaaatcgt ttcggtgatc atcgaggccc cttccgagac tgtcagcaag
      241 gccatcaatt gcgcctgcat atcggtcgga aagccgggat aaggctcggt cataacatcg
      301 acacctttga tgccgccatt ggtgcgggta atgcggacac cgtcatcggt ctcacttact
      361 tcagcgccgg cacgcaccaa aacatcggcc actgcatcaa cgagttccaa cttggtaccg
      421 gtgagcgtga tatcaccgcc ggtaatagct gccgccaccg cataactgcc ggtctcgatc
      481 cggtccggga ccacctgata gtctccacct tggaggcttg atttaccggt cactgtcaaa
      541 gtgtcggtgc caatgccttc aatctccgcg cccatggtct gcaaacaatg ggcgagatcg
      601 gcgatctcgg gttcgcgggc cgcattggca atggtggttt cgccctcggc caagctcgcc
      661 gccatcagca cattttcggt tgcgcccacc gagacagatg gaaacactac acgggcacct
      721 ttaagaccat ttggcgcgaa ggcacggata tagccctctt ccaattcgat ctccgcaccc
      781 agcactttaa agccttcgag atggagatca accgggcggg taccgatggc acagcctcct
      841 ggcagcgata ctttggcttc accccagcgc gccaatagag ggcccaacac caaaacagac
      901 gccctcatcc ggcgcactaa ttcatagggt gcggttttat cctcgggctc cttggcgctg
      961 agaccaaaca cgcggctaac gtgcccgcca ttgggcgcat caccgttcat actaatttcc
     1021 acaccaagct ccgacaacaa atgcaccatc gtcgtgatgt ctgccaaatg cggcagattg
     1081 gacaagcaca gggtctcgga ggtcaaaagt gaagccgcca tcaacggcaa cgccgcgttc
     1141 ttggcaccgc cgatttgaat ggtcccggag agtggttgac cgccctgaat gcaaattcta
     1201 tccatagcaa gtgttcttaa atcaacttag ctgagcgggc aaactttact cacctgattt
     1261 tggctttttt gcggtttttt ttcggcgttt cagattttcc ctgagcgcct cggcgagccg
     1321 cttttcccgc tccgtggcct tagcgacctt ggccgccgat atgtttggtt gctttttttg
     1381 ctttaccata aggagcttgt cgccgattac cccctactgc gtcaagtgtc ggttaaaaac
     1441 tagcttgccc gatttgcatt tgcggtataa atactccccc acaattccca ataaatccac
     1501 gagccgctgt agctcagtgg tagagcgtcc cattggtaat ggggaggccg gtagttcgat
     1561 cctacccagc ggcaccattt ttctttttgg tttcagttaa ttagatggaa acctatctct
     1621 gaagttcggc gtctgcgcca aaatgatact tagcccgcgg cgatcacctt gggggcccgg
     1681 tagtacatgc ccatggagcg atagctcagc accagttcgt catgctggtt gtgcaactcg
     1741 accaggtcgc ggacaatgcc ccggtcgggt ttgctctttg acacctctac gccggtcacc
     1801 gtcacccgga cccgcaaacg gtcccccggc cgggtgggag catgccagcg gatttcatcg
     1861 agaccgggag aagcgatacc ggatttatcg gagatgaaat gctcaaccaa aagccgcatg
     1921 gccatggaaa ttacatggta gccgctggcg atgacgctgc cgaactggga ctcccgagcc
     1981 gcttcggtgt cgatatgaac cggacgggga tcgtattttt cggcgaactc gacaatttcc
     2041 tcttcggtga gggtaaattc tcccaactca tgggtccggc ccacttcata atcttccaga
     2101 tacttgtcca tcttctcgcc tgccgacatg gtctgcttat ctcttccgtt aacgtgatct
     2161 gtcgggagtt atagcccaaa gtggtgtttt ggcatctgaa tcaagcggcg accagatcga
     2221 cttttgttac ctcaacaccg tctttgaa
//
LOCUS       DASCNL010000525         2171 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001093066, whole genome shotgun sequence.
ACCESSION   DASCNL010000525 DASCNL010000000
VERSION     DASCNL010000525.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001093066"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(334..1494)
                     /gene="argE"
                     /locus_tag="QF359_07070"
     CDS             complement(334..1494)
                     /gene="argE"
                     /locus_tag="QF359_07070"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008777 - acetylornithine deacetylase
                     activity [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HJO86706.1"
                     /translation="MAAVMTYEEILRSLIGFDTVSAHSNKALIDFIESYLAGFDISCN
                     IAPNDEGTKADLIATIGPMVEGGIVLSGHTDVVPVEGQDWHTDPFEMTKKDCKLYGRG
                     ACDMKGFIAVALSLLPEFLARDLKVPLHLVFSYDEELGCLGAPTLIARMCKDVPSPQA
                     AIIGEPTSMKLVNAHKGVALFETTVTGRPGHSSQTHMGVNAISFAATCIHYLGEIAEE
                     LKVNGTIDERFEPPYSTISPGTIVGGTALNIIAEECKFVWDCRGILSADGEFALRKME
                     EYCRDTLIPKMRETTPEPDIVTTTKVLAPPLEASDDNPAEALVRQLTGQNQAGVVSFA
                     AEAGLFQEAGVPSVICGPGSIDQAHRPDEYVELSQLKECEDFLRQLADWAVG"
     gene            complement(1495..>2171)
                     /locus_tag="QF359_07075"
     CDS             complement(1495..>2171)
                     /locus_tag="QF359_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HJO86707.1"
                     /translation="QGKPGNLMRDTQVQWFLTVVAVIVVIVAGWLWLGNGEDPLLALR
                     YSSFNVISIMTGTGYATAGFDNWGNFAIPVFFFIMFIGGCAGSTTCGIKIFRFQVLYA
                     AAKTQFQNLAQPHGVFIPYYNHRPIPEEVIGSVLSFFFVFFFTYTLLAIALAFLGLDF
                     ITSVSAAASAISNVGPGLGPVVGPDGNYANLPAAAKWILSIGMLLGRLELFTVMVLFT
                     RAFWRA"
BASE COUNT          611 a          576 c          493 g          491 t
ORIGIN      
        1 tatcgcctct tccaaaattt tgactttcga attattttca agctccagaa tacgctgtct
       61 gcgaattcat ccaacctaat tttgaaaggc ataaactata aaacttaccc aaaaatatac
      121 aaagactatt gatctcagag cttcaacagt aatgggggaa tttgaaagat ctattttaag
      181 cggtccattg attttggcac taatccaaaa ccgattatca aaatccaaac aaaaaagact
      241 gtaataaaat tcctccaaac tctagtcgtt tcgtcggaca ttcacgattg ttgaaatctt
      301 ggcttttgta tcgacatatt cgattatctc cccctacccc actgcccaat cggcgagttg
      361 gcgcaggaag tcttcgcatt ctttgagctg tgacagctcg acatattcat cgggccggtg
      421 ggcctggtcg atactgccag gcccgcaaat aaccgaaggc acgccagctt cttgaaacaa
      481 ccccgcctcg gcagcaaagg aaaccactcc cgcttggttt tgcccggtca attgccggac
      541 cagtgcttcc gccggattgt catccgaagc ttccaaaggc ggcgccaaca ctttggtcgt
      601 agtcacgata tcgggttcag gagtggtctc gcgcattttt gggatcaaag tatcgcggca
      661 gtattcttcc atttttcgca aagcaaattc accatcagca ctcaaaatac cacggcaatc
      721 ccaaacaaat ttacattcct cggcaatgat attaagggcc gtaccgccga caatagtgcc
      781 tggagatatt gttgaatacg gcggctcaaa gcgttcatca atggtgccat tgactttcaa
      841 ttcttcggca atttcaccca agtaatggat acaggtggca gcaaaagaga tcgcattgac
      901 ccccatgtga gtctgtgagg aatggcccgg ccgcccggtg accgtggtct caaagagcgc
      961 cacgccttta tgggcattaa ccagtttcat gctggtaggc tcacctataa tcgccgcttg
     1021 aggcgacggc acatctttac acatgcgcgc tatcagcgtc ggcgcaccga gacaacccag
     1081 ttcctcatca tagctaaaca ccagatgcag cggcaccttc agatcacggg caagaaattc
     1141 cggtaacagg gataaagcaa ccgcaatgaa gcccttcata tcgcaggcgc cccggccata
     1201 gagcttgcag tcctttttgg tcatctcgaa gggatcggtg tgccaatcct ggccttcgac
     1261 tggcacgaca tcggtgtggc ccgagagcac aatacctccc tcaaccattg gtccaatcgt
     1321 cgcgatcaga tcggccttgg tgccctcatc gttgggtgcg atgttacagc tgatatcaaa
     1381 gcctgcgaga taactttcaa tgaagtcgat caaggcttta ttggaatgtg ccgacaccgt
     1441 atcgaagccg attagagacc taagaatttc ttcataagtc attacagctg ccatttacgc
     1501 tctccaaaaa gcgcgggtaa agagcaccat cacggtgaac agctcaagcc ggccaagcag
     1561 catgccaatc gacaggatcc acttcgcagc ggccggtaag ttggcataat ttccatccgg
     1621 cccgaccaca gggcccagtc ctggaccgac attggaaatg gcggaagctg ccgccgaaac
     1681 actggtaatg aagtccaagc ctaagaatgc caatgcaatc gccagcaatg tataagtgaa
     1741 gaaaaagaca aagaaaaaac tcaagaccga gccaataact tcttcgggta tcggccggtg
     1801 attgtaatag ggaatgaaca caccatgcgg ctgggcgagg ttctgaaact gggttttagc
     1861 cgccgcataa agcacttgaa agcggaatat tttaatgccg caagtggttg aaccggcaca
     1921 gccgccgata aacataatga agaaaaacac cgggattgca aaattacccc aattgtcaaa
     1981 gcctgctgtc gcatagcccg tcccggtcat gattgagata acgttaaagg atgaataacg
     2041 cagcgccagc aacgggtctt ctccattgcc gagccacaac cagccagcga caatgacaac
     2101 gataactgcg accacggtta aaaaccattg aacctgagta tcgcgcatca aattgccagg
     2161 cttaccttga a
//
LOCUS       DASCNL010000526         1215 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001094901, whole genome shotgun sequence.
ACCESSION   DASCNL010000526 DASCNL010000000
VERSION     DASCNL010000526.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001094901"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="QF359_07080"
     CDS             complement(<1..655)
                     /locus_tag="QF359_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HJO86708.1"
                     /translation="MAKKQSPHIFERLALIGIGLIGSSIARVAKRDNLVGHISVSART
                     QKSLDKAMELGIADSVSLDQKAAVKDADMVIICAPISAYQEIIEAIAPGLKPGAIVSD
                     VGSVKQAVVRDLGSHIPEGIHLIPAHPVAGTEHSGPEAGFPELFTDRWCILTPPLGTD
                     EKSIDAVEAFWKAAGSDVEIMDPGHHDQVMAMTSHLPHLIAYTIVGTATDLEKTLRNE
                     "
     gene            complement(657..>1215)
                     /locus_tag="QF359_07085"
     CDS             complement(657..>1215)
                     /locus_tag="QF359_07085"
                     /inference="COORDINATES: protein motif:HMM:NF012382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO86709.1"
                     /translation="EVLLVLDSAYAEFVEVDDYSDSSEFVTTNDNVVMLRTFSKIYGM
                     GGIRLGWGYAPDAVIDILNRMRSPFNVSYPAIVAGVAAIQDDEFLKKSQEHNKKWLAW
                     TTENIRALDLEVPDSVCNFILVRFPEDQGKNATAESADVFLKSKGIIVRRMGGYGLPD
                     ALRISIGLEDEMKFVVETLAEFVSN"
BASE COUNT          306 a          305 c          298 g          306 t
ORIGIN      
        1 cttcgttgcg cagggttttc tcaagatcgg tagctgtgcc gacgattgta taagcgatta
       61 aatgcggtag atgagaggtc atggccatta cttgatcgtg atgacctggg tccattattt
      121 cgacatctga tccagcggcc ttccaaaatg cttcaactgc gtcgatagat ttttcgtccg
      181 tgccaagtgg tggcgtcaat atgcaccagc gatctgtgaa caattccggg aagcctgctt
      241 ccggaccgga atgctcggta ccggcaactg gatgggccgg gatcaaatga atgccttcgg
      301 ggatatgcga gccaagatca cggaccacag cttgtttgac cgaaccaaca tcgctgacaa
      361 tggcgcccgg ttttaaaccc ggtgcaatgg cttcgataat ttcttggtag gcgctaattg
      421 gtgcgcagat gataaccata tcagcatctt ttactgcggc cttttgatcg agcgaaacac
      481 tatcggcaat accaagttcc atcgctttat cgaggctttt ctgggtgcgg gccgacaccg
      541 aaatatgccc aaccaaatta tcccttttgg caacgcgcgc aatagaagag ccgatcagcc
      601 caatgccgat cagcgcaagt cgctcaaaaa tatggggcga ttgttttttg gccatcctaa
      661 ttactcacaa attcagctag cgtttcgacg acgaatttca tttcatcttc gaggccaatg
      721 gatatccgca aggcgtcggg gaggccataa ccacccatac ggcgtacgat gatgcctttg
      781 gattttagaa agacatcggc tgattcagcg gtagcgtttt tgccttgatc ttccggaaag
      841 cgaaccaaaa taaaattgca gacactgtct ggtacttcga ggtccagcgc ccggatgttt
      901 tcggttgtcc aggcgagcca ctttttattg tgctcctgag atttctttaa aaattcatcg
      961 tcttggattg cagcaacacc agcgactatt gcggggtagg aaacattaaa tgggctccgc
     1021 atccgattga ggatatcaat cacggcatct ggcgcatagc cccagccaag ccgaatgcca
     1081 cccatgccgt agattttcga aaaagtccgc agcatgacaa cattatcgtt agtggtgaca
     1141 aactccgaac tgtccgagta gtcgtccact tcaacaaatt cagcataggc ggaatccaat
     1201 accagcagga cttcg
//
LOCUS       DASCNL010000527         1745 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001106607, whole genome shotgun sequence.
ACCESSION   DASCNL010000527 DASCNL010000000
VERSION     DASCNL010000527.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001106607"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="QF359_07090"
     CDS             complement(<1..280)
                     /locus_tag="QF359_07090"
                     /inference="COORDINATES: protein motif:HMM:NF020478.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1849 family protein"
                     /protein_id="HJO86710.1"
                     /translation="MPNLVPHRAVYAMHLSKAGSNGGLTSARGVMTYVFKDQCDAWTV
                     ESKVYLRLRYGKRPEIENVRSLVTWEDKDSSGFRFRVTKTTNGKKTEEI"
     gene            complement(966..>1745)
                     /locus_tag="QF359_07095"
     CDS             complement(966..>1745)
                     /locus_tag="QF359_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HJO86711.1"
                     /translation="EGQPGLGYIFFRDGEGAGPLAKNIGAERTEQLRTELELSDGDAV
                     FFVAGLPKTFAPFAAAARNKVCEELDILEKDYFKFCWINDYPMYEMDEETGQIDFSHN
                     PFSMPQGGLEALENENPLEILAYQYDIVCNGVELSSGAIRNHRPDIMYKAFEIAGYSS
                     SDVEEQFGGLLNAFKFGAPPHGGSAPGIDRIVMLLADEPNIREVIAFPMNQQAEDLLI
                     NAPVEITSERYKELHIKADLPKVKKKEGGAGQQDSKDLKDS"
BASE COUNT          424 a          411 c          404 g          506 t
ORIGIN      
        1 taatctcttc ggtttttttg ccgttggtgg tcttcgttac ccggaaccgg aagcccgaac
       61 tatctttgtc ttcccaggtc accagcgagc ggacattttc aatttccggc cgtttaccat
      121 agcgcagccg caaatatact ttgctttcaa ccgtccaggc atcgcattga tctttaaata
      181 cataggtcat gacgccgcgc gcactggtca aaccgccatt tgagccagcc ttggagagat
      241 gcatggcgta caccgcgcga tgcggcacta agttaggcac taatccggcc gcctcggcgg
      301 gttgaatttt ggtggctgta taaacgctgc agaataaggc tgtacttaga atcggcaggg
      361 cataatgacg cattaatttt gtatccatac tttgaataat atctcgggct catcctaaat
      421 cattgaagcc atgtgcgcca agggaaagcg ttcatctcct ttatcacgtt tgcgcttttc
      481 cgctgtgatg ccggtaacaa cggcagaatc tatcatcaat agggtaaaag attccgagca
      541 tcgttatatt tatttcttaa gatatcatca taacacattg ttattaatag atttatataa
      601 tggcacagcc tttacgttgt taatcggaag gtaatctctt ttggttataa agaggtccgc
      661 tgccaaactt catgacataa attttagttt tatttggtgt taaaactcaa tggcggcagc
      721 ttgattggca cactgaccgg caatttaatc ggcgggctga tttcgcttaa agcacgcgga
      781 attttcggct acttttcgtt ggtttcaagt aaatccagaa ttttctgtgt gcggatgata
      841 atccgttccg cattctcggc atactatttt ttagaactgt agttgttgcc gccaattatt
      901 tggataaatt agtgagagat actacaggaa ataggttagt taattagtac gcctaaatat
      961 gcaagttagc tgtcttttaa atcttttgaa tcctgctggc cagcaccacc ttcttttttc
     1021 tttactttcg gtagatcggc tttgatatga agctctttat aacgctccga cgtaatctca
     1081 accggcgcat ttattaaaag atcttcggcc tgctggttca tcgggaaggc aataacttcg
     1141 cggatgttcg gctcatccgc cagcagcatg acgatgcggt cgatgcctgg cgctgagcca
     1201 ccatgcggcg gggcaccaaa tttaaaggcg tttaagagcc cgccgaattg ctcttcaaca
     1261 tcgctgctgg aataaccggc aatctcgaag gctttataca taatgtcagg gcgatggttc
     1321 cgaatggcgc cagaggatag ctcaaccccg ttgcaaacga tgtcatactg gtaggcgagt
     1381 atttcgagcg ggttttcgtt ttcgagcgct tccaatccgc cttgcggcat cgagaaggga
     1441 ttgtgactga aatcgatctg acctgtctct tcatccattt catacattgg atagtcattg
     1501 atccagcaga atttgaagta gtctttttcg agaatatcca actcttcgca aactttattg
     1561 cgcgcggcag cggcaaacgg cgcgaatgtt ttcggcagac cggcgacaaa gaacaccgca
     1621 tcaccatcac tgagctctaa ttctgtgcgc agttgttcgg ttcgttccgc gccaatgttc
     1681 ttggcaagag gcccggcgcc ttcaccatcg cggaagaaaa tatagccgag gcccggctgg
     1741 ccttc
//
LOCUS       DASCNL010000528         2319 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001109307, whole genome shotgun sequence.
ACCESSION   DASCNL010000528 DASCNL010000000
VERSION     DASCNL010000528.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001109307"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(185..433)
                     /locus_tag="QF359_07100"
     CDS             complement(185..433)
                     /locus_tag="QF359_07100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86712.1"
                     /translation="MSLEESLAKLREASAERIPEEIRVKMGAATRAIWDSGIMDGVIK
                     VGDSLPVFNLPNSNGTMVSSNDLLDKGNLVVTIYRGHW"
     gene            905..2065
                     /locus_tag="QF359_07105"
     CDS             905..2065
                     /locus_tag="QF359_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HJO86713.1"
                     /translation="MPTDTPLKNELPLVDVFESPDRLLMGAGPSRVHEDVLKAMAQTT
                     IGHLDPAMVVMMDELKDMLRYVFQTGNVMTFPVSGPGSLGMEACVNNIVERDDKVIVA
                     INGVFGTRMAEVTRRAGAEVIVTEDEWGMAVDPNKVEAALKANPGVKAVGFVHAETST
                     GALSDAAAICRLAKNHDAMSIVDTVTSLGGVPVNIDVWDADAVYSGTQKCLSCPPGLS
                     PMTFSDRAVQATLDRETPVQSWLLDLSLVASYWQGDAKSGARTYHHTAPVNTLMGLHE
                     ALRRIVQEGLENVWARHKAASDIIVAGMEEMGFSMLVDANIRLPELLTIILPEGIDDT
                     AVRGKLLNDHRIEISAGLGPFAGKLWRIGVMGEGARPENAERVLRAIKALIS"
BASE COUNT          595 a          540 c          581 g          603 t
ORIGIN      
        1 tgcccaattc ggagcaatag gcattgcctt catcacgcag caaatcaaag ctgagtttgt
       61 gcttctcgac cagttcttta tttttagcct gattttgcgg cgagatcgcc accatggacg
      121 tgttcaattc agataagtcg tcaacaatgt cacgcaaagc atacagctct gcattacagt
      181 aaggtcacca atggccacga taaatggtaa caaccaaatt ccccttgtcc agcagatcat
      241 tagaactgac catcgtgccg ttcgagtttg gcaaattaaa aaccggcaga gaatcgccaa
      301 ctttaataac gccgtccata atgcctgagt cccaaatggc tcgcgtggcc gctcccattt
      361 tcacccgaat ttcttccggt atgcgctctg cactggcttc acgaagcttg gcgagacttt
      421 cttctaagct catatagttc tcccctaaat tggtaggtta aaagtttgat gcaattgtca
      481 tacaggatgg acaaagttag cacaatcagg cagttggcca gacaatgggc agtaacgtat
      541 aattgattca atatctataa acaccagttc tgccacattt cgcgataggc agtttctaat
      601 ttttgggatg tttgggatta cttttcaaca agttgcgata aatggatttg gctccggcaa
      661 tatcaccaga ttcatgacat tttattgcag tatttaacgt gacggaaaaa tcttgttcgt
      721 cgttggacat tggcggcgcc ttcttatcga tgaacgcaat agtgccacaa tattatttca
      781 ttgaaagcat tattagattc ttgttggagt tcgattgttt aatcccgtga caaagccggt
      841 ttgatgattt aagggcatag gcaaatcgat aaccaaaaaa acttaaataa aaggattaga
      901 gaacgtgccg acagatacac cactaaaaaa cgaacttccc ttggtagatg tttttgaatc
      961 accggaccgg ctgttgatgg gtgcgggccc gtcacgcgtc catgaagacg tcttaaaagc
     1021 gatggcgcaa acaacgatcg gtcatcttga tccggccatg gtggtgatga tggacgagct
     1081 taaagacatg ctgcgctacg tttttcaaac gggtaatgtg atgacttttc cggtgtccgg
     1141 tccgggctcc cttggtatgg aggcttgcgt caataatatt gtcgagcggg atgataaagt
     1201 catcgttgcc ataaacggtg tttttggcac ccgcatggca gaagtcaccc ggcgcgccgg
     1261 cgcggaagtt atcgtcaccg aagatgaatg gggcatggcg gtagatccta ataaagtcga
     1321 agcggcactg aaagccaatc caggcgttaa agctgtcggt tttgtccatg ccgagacctc
     1381 tactggtgca ctttccgacg ccgcagcaat ctgccgttta gcaaaaaatc atgacgccat
     1441 gagcatcgtc gatacggtaa catccttggg gggcgtgccg gtcaatatcg atgtctggga
     1501 tgctgatgcg gtctattcgg gcacccagaa atgtctttcc tgcccacccg gtctgtcacc
     1561 gatgaccttc agtgatcggg ctgtccaggc gacgctggac cgtgaaacac cggtgcaaag
     1621 ctggctgctg gatctgtcgc tggttgccag ttactggcag ggcgatgcga aaagcggggc
     1681 ccggacttat catcatacgg caccggttaa taccttgatg ggtctccatg aagcacttcg
     1741 ccgtatcgtg caggaaggtc ttgaaaatgt ctgggcacgc cataaggcag cttcagatat
     1801 cattgtcgcc ggtatggaag agatgggctt ttcgatgctg gttgatgcta acatccgcct
     1861 gcccgaactg ctgacaatca ttttgccgga aggtattgat gacaccgccg ttcgcggcaa
     1921 attactcaac gaccaccgta ttgaaatcag cgcggggctc ggaccctttg ccggtaagtt
     1981 gtggcggatt ggtgtcatgg gcgaaggagc acgaccggaa aatgctgaac gagttttgcg
     2041 cgccatcaag gcgttgatta gctgaaactg cttaaaacaa ttggcctgat ttccagttat
     2101 gcagcggctg accggttggt agcgaatcgc catttcgcta gttccaaacg atattgacca
     2161 aaaaacggtt cacctacgac aacaatagtg ggcgaaccgc aatggcttat ttttttaccg
     2221 caattgaaaa aaatcatgcc gagcggtaaa aaaataagcc attgcggttc gcccactatt
     2281 gttgtcgtag gtgaaccgtt ttttggtcaa tatcgtttg
//
LOCUS       DASCNL010000529         2603 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001110328, whole genome shotgun sequence.
ACCESSION   DASCNL010000529 DASCNL010000000
VERSION     DASCNL010000529.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001110328"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="QF359_07110"
     CDS             complement(<1..298)
                     /locus_tag="QF359_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86714.1"
                     /translation="MTNISNISGLIGELKENYDVEYWGSLLDEFDQRLAELHKNVDGV
                     KYTEWGLVALKAIQGDQEAKNMMGDILEPGSDIKKIVDEIALLYLVQPVLRHYLF"
     gene            complement(316..651)
                     /locus_tag="QF359_07115"
     CDS             complement(316..651)
                     /locus_tag="QF359_07115"
                     /inference="COORDINATES: protein motif:HMM:NF024809.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HJO86715.1"
                     /translation="MLELYNTPHSTCSQKVRIYLAEKNLEWTDQQVNLATKEHLSPKY
                     PKINPNGVVPTFIHNGTIITDSSVICEYIDEVFPEPALTPAESAQKVAMRTWLRFIEE
                     VPTVAVPTC"
     gene            complement(731..1063)
                     /locus_tag="QF359_07120"
     CDS             complement(731..1063)
                     /locus_tag="QF359_07120"
                     /inference="COORDINATES: protein motif:HMM:NF018894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HJO86716.1"
                     /translation="MSDQSDFDEKRRHKRLKAPNSVKAKINDEEIGATLQEVSVGGAA
                     LDLQHNVKTDDPIELMIDDVGELSATVSRSLDDGVAVRVMDIDDDEEEMLLADLERID
                     LNIRNEDF"
     gene            complement(1181..1942)
                     /locus_tag="QF359_07125"
     CDS             complement(1181..1942)
                     /locus_tag="QF359_07125"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86717.1"
                     /translation="MTKLNDKVAIVTGAAQGIGATYAKALAAEWAKVVLTDVLDCALA
                     AAEIAAQYQGAETLVFSTDVSDEKTTQSMVDQTVERFGRLDILVNNAAIFGTIVPRPF
                     EDIEVEDWDKLMAVNVKGPWLCTKAATPVMRHQGYGKIINIASGTLFKGAPNLLHYVS
                     SKGAILAMTRSMSRELGDDGICVNTIAPGLTMSENVLNSEKHMEYRDVNAASRALKRY
                     QTPDDLIGALVFLASEDSDFITGQCLVVDGGSVNN"
     gene            complement(1965..>2603)
                     /locus_tag="QF359_07130"
     CDS             complement(1965..>2603)
                     /locus_tag="QF359_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HJO86718.1"
                     /translation="VITGEGGNFCSGGDVHEIIGPLTKMDMDGLLTFTHMTGDLVKSM
                     RKCPQPIISAIDGICAGAGAIIAMASDLRYGTPESMIGFLFTRVGLAGCDMGACAMLP
                     RIIGHGRASELLYTGRMMTSEEAANWGFYNGVAEPDEVLEVATNQAKRLAKGPTFAHA
                     MTKKTLHQEWNMGVDEAIEAEAQAQAICMQTQDFKRAYHAFVAKEKPVFEGN"
BASE COUNT          648 a          662 c          581 g          712 t
ORIGIN      
        1 gaaagagata gtggcgtagg accggttgca ccagataaag cagagctatt tcatcgacaa
       61 tttttttaat atcactaccg ggctccagaa tgtcacccat catatttttg gcttcttggt
      121 cgccttgaat agctttgagc gcgactaaac cccattcggt gtatttaacc ccatcgacat
      181 tcttatgaag ttcggccaac cgttgatcaa actcatccag caaggacccc caatattcaa
      241 cgtcgtaatt ttctttcagc tctccaatca agccagaaat attagaaata ttggtcattg
      301 ttgtctccaa tttagctaac aggtcggcac cgcgacggtc ggtacttctt cgataaagcg
      361 cagccaggtc cgcatagcta ccttttgagc ggactctgcc ggggtcaaag cgggttctgg
      421 aaaaacctca tcaatatatt cacagataac gcttgaatcg gtgattattg tgccattgtg
      481 gataaacgtt ggtacgacgc cattgggatt gattttggga tattttggag agaggtgttc
      541 tttggttgcc agattgacct gttggtctgt ccattctaga tttttttctg ctaggtaaat
      601 gcgaactttc tggctgcagg ttgaatgcgg cgtattgtag agctcaagca tgaaatatag
      661 ttcccttctg gccgggaact aatatcggat ttagttctgc ctgtcacatc atcaatttaa
      721 aatcgtcaat ctaaaaatct tcgtttctga tattgagatc gatgcgctca agatcagcca
      781 gcagcatttc ttcctcgtca tcatcgatat ccatgacacg tacggctaca ccatcatcca
      841 aggacctgga tactgtagcg cttaattcac cgacgtcatc aatcatcaat tcaatcggat
      901 catctgtttt aacgttatgt tgcaaatcaa gagccgcacc accaacagat acctcctgca
      961 gcgtcgctcc aatttcttca tcattaattt ttgctttgac gctattgggt gctttaagcc
     1021 gcttgtgccg ccgtttttca tcaaagtcgc tctgatcaga catctctacc tcctatctgc
     1081 cgcccaaaag aacgaaacta tgaatagttc atcccgattc ggaattttcg tcaatcccct
     1141 ttttaataaa ctcagcggaa ttaggaaata atttaaacgg ctagttgttt accgagccgc
     1201 catcaacaac caaacattgt ccggtgataa aatcactatc ttccgaggcc agaaacacta
     1261 aggcgccgat caggtcatct ggcgtctgat agcgtttcag ggcacgtgat gcagcattga
     1321 catcccggta ttccatatgt ttttcggaat tcagcacatt ttcgctcatc gtcaacccgg
     1381 gtgctatcgt attaacgcaa attccatcgt caccgagttc ccgggacatt gaccgggtca
     1441 ttgccaatat agcgcctttt gaagagacgt agtgtaagag gttcggagcg cccttgaaca
     1501 aagttccgga cgcaatattg ataattttac cgtaaccttg atggcgcatg actggcgtgg
     1561 ccgccttggt gcagagccat gggcccttga catttaccgc cattaattta tcccagtcct
     1621 cgacttcaat atcttcaaat ggtctgggaa caatcgtgcc gaatatagcc gcgttgttaa
     1681 ccaagatatc gaggcgacca aagcgttcga cggtctgatc gaccatcgat tgcgtcgttt
     1741 tttcatcgct gacatcagtg gaaaagacaa gggtttcagc accttgatat tgcgcggcaa
     1801 tctcggcggc ggcaagggca cagtctagca catcggtgag cacaaccttc gcccattcgg
     1861 ctgcgagagc tttagcgtaa gtcgcaccaa tgccttgagc cgccccggtc acaatggcga
     1921 ctttatcatt taattttgtc attgatgccc cttctctaaa ttgcttaatt gccttcaaat
     1981 acgggttttt ctttggcgac aaaggcatga tacgcacgct taaagtcttg tgtctgcatg
     2041 caaattgcct gcgcctgtgc ttccgcctcg atggcttcgt cgacgcccat attccattcc
     2101 tggtgaaggg tctttttggt catcgcatgg gcaaaagttg gtcctttagc gaggcgcttg
     2161 gcctggttgg tcgcgacttc caatacttcg tcaggctcag caacaccatt atagaaaccc
     2221 caatttgcgg cttcttcgga agtcatcatg cggccagtat aaagcagctc ggaggcgcga
     2281 ccgtggccga taatacgcgg cagcatagcg caggcgccca tatcacagcc agcgagacca
     2341 acccgggtaa acagaaagcc aatcatgctt tccggtgtgc cataacgcaa atccgacgcc
     2401 attgctatga tagcaccggc accggcacat ataccgtcga tcgcagaaat gatgggttgt
     2461 gggcatttgc gcatagattt gaccagatcg ccggtcatgt gggtaaaggt caacaaccca
     2521 tccatatcca ttttggtcag cggaccgata atttcgtgga catcaccgcc ggagcaaaag
     2581 ttaccgcctt caccagtgat cac
//
LOCUS       DASCNL010000530         3235 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001111807, whole genome shotgun sequence.
ACCESSION   DASCNL010000530 DASCNL010000000
VERSION     DASCNL010000530.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3235)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3235)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3235
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001111807"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2121)
                     /gene="xdhB"
                     /locus_tag="QF359_07135"
     CDS             complement(<1..2121)
                     /gene="xdhB"
                     /locus_tag="QF359_07135"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR02965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004854 - xanthine dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0009115 - xanthine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdopterin binding
                     subunit"
                     /protein_id="HJO86719.1"
                     /translation="MDGSQNIVGAAHDKIQHDSAVKHVTGKAIYIDDMPSLPGTLEIV
                     LVTSPHAHARINSIDGKTALAQTGVAAVLTAKDIIGHNDIAPIFEGEPAIADGVAEYA
                     GHPVALVAAETYDQAFSAAKLVNVEYEELTPVLDIQDAMAKEQFTYTPPSVTKGDPDV
                     ALENAANRLQGEIACGGQDHFYLETNIALAIPGEDQDMTVYSSTQHPTEAQHGVAHVL
                     GVPRNAVTVEIRRMGGAFGGKESQPTIIAAMAALMAAKTGQPAKLRLRRDEDMIVTGK
                     RHDFEFKYDVGFDDDGRIEGVDIEMAMRSGNVADLSSGVMARSLCHGDNCYYLPNARF
                     RGYPCKTNTVSNTAFRGFGGPQGMIVIEIILEHIAHHLGQNLDDIRKVNYYGQDDRNQ
                     TPYGQIVNDNIIEEMVDRLTREIDYEGRKKAIEKFNAENQTLKKGIAIMPIKFGISFN
                     MPALNQAGALVHVYTDGSVHLNHGGTEMGQGLFTKVAQVVATVFQIDIDNIKISSTRT
                     DKVPNTSATAASAGSDLNGMAAFDAANKIKKRMAGIAAQHFDISEDEIEFRQNRIYGG
                     NESIAFAELAQKTWEARESLSATGYYQTPDLTWDPITCTGSPFYYFSYGVAISEVVID
                     TLTGESRTLRTDILQDCGKSLNPRVDYGQIEGAFIQGMGWLTSEELVWNDKGQLLTHG
                     PSTYKIPGSRDIPPEFNIHILEDAP"
     gene            complement(2121..>3235)
                     /locus_tag="QF359_07140"
     CDS             complement(2121..>3235)
                     /locus_tag="QF359_07140"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO86720.1"
                     /translation="AMVKTDGTQCGFCTPGIIMSLFALRQSEAEVTEGEIHNTLAGNL
                     CRCTGYRPIVEAAREACVAAPDGLALETLKANDSYQEGNQSFHTPKSITEMAEVFTAN
                     PDANLLGGGTDLGILVSKEREVLSTIIQTSRVAELLEINETNTDISFGAAVTYSDALP
                     FIERLYPSFATLITRIGSVQIRNVGTIGGNIGNASPIGDTPPCLIALDATLVLYSQAG
                     ERELPIEEFFLDYRKTDLKAGEFIKAIRLPKLSNAQEFRAYKISKRYDQDISAVVGAY
                     RIELEDNTVLDARIAYGGMAAIPKRGVACETALIGNAWDLATAMTMLDFIQEDYQPIS
                     DHRASKEYRFQVAGNLFQRLYQDLSGADEALEVVAV"
BASE COUNT          785 a          849 c          783 g          818 t
ORIGIN      
        1 tggcgcatcc tccaggatgt gaatattaaa ctcaggcggg atatcccggc taccagggat
       61 tttgtaggta gatggcccgt gagtcaaaag ttgaccttta tcattccaga ctaattcttc
      121 cgatgtcagc caccccatac cttgaataaa cgcgccttca atctggccgt aatcgacgcg
      181 cgggtttaaa gattttccac aatcctgcag aatatctgtc cgtagtgtcc ttgattcacc
      241 ggtcaacgta tcgatcacaa cttccgaaat cgcaacgcca taactaaagt aataaaacgg
      301 tgagccggta caggtgatcg ggtcccaagt taaatccggg gtttgataat atccggtagc
      361 agacaacgat tcccgagctt cccaggtttt ttgcgcaagc tcggcaaagg caatactttc
      421 attgccacca taaatgcgat tttgacgaaa ctcgatctcg tcttccgaaa tatcaaaatg
      481 ctgagcagcg ataccggcca tgcgtttttt gattttattt gccgcatcga aggccgccat
      541 gccattgagg tccgagcctg cggaagcggc tgttgccgag gtgttgggga ctttgtcggt
      601 tcgcgttgac gaaattttta tgttgtcgat atcgatctga aagaccgtcg caacgacttg
      661 ggcgactttg gtgaacagac cttgacccat ctcggtgcca ccgtggttca aatgaacgga
      721 gccatcggtg tagacatgca ccaatgcacc cgcctgatta agcgccggca tattaaacga
      781 gataccaaat ttgatcggca ttatggctat gccttttttc aaggtttggt tttctgcgtt
      841 gaacttctcg attgcttttt tacggccttc gtaatcgatc tctcgagtga ggcgatcaac
      901 catttcctca ataatattgt cgttgacgat ctggccatag ggtgtctgat tgcggtcgtc
      961 ctgaccgtaa taattaactt tgcgaatgtc atccaagttc tggccaaggt gatgcgcaat
     1021 atgctcgagg atgatttcga tgacgatcat accttggggg ccgccaaagc cgcggaaggc
     1081 cgtatttgac accgtattgg ttttgcacgg atagccgcgg aaacgagcgt tcggcagata
     1141 atagcaatta tcgccatggc acagcgaacg tgccatcaca ccggagctta aatcggcgac
     1201 attgcccgac cgcattgcca tttcgatatc aacgccttca atccggccgt catcgtcaaa
     1261 accgacatca tatttaaatt caaaatcatg acgtttaccg gtaacgatca tatcttcatc
     1321 ccggcgcaag cgaagtttgg cgggctggcc ggttttagca gccatcaatg ccgccattgc
     1381 ggcaataatt gtcggctggc tctccttacc accaaaagcg ccacccatgc ggcggatttc
     1441 aaccgtcacc gcatttctcg gaacgcctag tacatgggca acaccgtgct gcgcttcggt
     1501 cggatgctgg gtcgagctgt aaaccgtcat atcctgatct tcaccgggta tggctaaagc
     1561 aatattggtc tcaagataaa aatgatcctg accgccacaa gcgatctcac cctgcaaacg
     1621 atttgccgca ttttcgagcg ccacgtccgg atcacctttg gttaccgagg gtggtgtata
     1681 ggtgaactgc tctttcgcca tggcatcctg gatatcaagc acgggtgtta actcttcata
     1741 ctcaacgtta accagcttgg cggcactgaa agcttggtca taggtctccg ccgcgacaag
     1801 ggcgaccggg tgaccggcat attcagcgac cccatcggcg atagccggct caccctcaaa
     1861 gatcggcgca atatcgttat ggccgatgat atctttcgcc gtcaacacag cggccacacc
     1921 tgtctgcgcc agcgccgttt tgccatcgat ggaattaatc ctggcatgcg cgtgaggcga
     1981 ggtaaccagc acgatctcca atgtgcctgg taggctcggc atgtcatcga tatagattgc
     2041 cttaccggtg acatgcttaa ccgcactgtc gtgctgaatt ttgtcgtggg cggcgccgac
     2101 aatattttgc gaaccgtcca tcacactgcc accacttcaa gcgcttcatc ggcaccggat
     2161 aaatcctgat acaatcgctg gaataaatta ccggcgacct ggaaacggta ttctttgctc
     2221 gcccggtgat cactgatcgg ttgatagtct tcttgaatga agtcgagcat agtcatggcg
     2281 gtggctaaat cccaagcatt accaatcagt gcagtttcgc aagccacacc acgttttggt
     2341 atcgccgcca taccaccata cgcaatgcgc gcatccaaga cggtattgtc ctctagctct
     2401 atacgatagg cgccgaccac cgcagaaata tcctggtcat agcgtttgga gattttatag
     2461 gcccggaact cttgggcatt gctcaatttt ggcaggcgga tggctttgat aaactcacct
     2521 gctttaagat cggttttgcg gtaatccaga aagaattctt caatcggcag ttcccgctcg
     2581 cctgcctgag aatacaaaac gagggtcgca tccagggcga tcaggcaggg tggtgtgtcc
     2641 ccaatcggtg aggcattacc gatattgccg ccaatcgtcc caacattgcg gatttgcacg
     2701 gagccaatcc gtgttatcaa agtcgcaaaa gaaggataga gccgctcaat aaaaggcaag
     2761 gcgtccgaat aagtaaccgc tgccccaaag gaaatatcgg tattggtttc gttaatttct
     2821 aaaagctcgg caacgcggct cgtttggatg atggttgata aaacctcacg ctctttgctc
     2881 accaaaatac cgagatcagt gccgcctcct aatagattag catcaggatt ggcggtaaaa
     2941 acttccgcca tttctgtaat tgatttaggt gtatggaaag attgattacc ctcttgatag
     3001 ctgtcattcg ctttgagcgt ttctaatgcc aaaccatccg gtgcagcgac acacgcctct
     3061 cttgcggctt caacaattgg ccggtagcca gtacagcggc agagattacc tgccagcgta
     3121 ttgtggattt cgccttccgt aacctccgct tcactttgac gcagtgcaaa aagtgacatg
     3181 ataataccgg gcgtacaaaa cccgcactgg gtgccatcgg tcttgaccat agcat
//
LOCUS       DASCNL010000531         1763 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001111992, whole genome shotgun sequence.
ACCESSION   DASCNL010000531 DASCNL010000000
VERSION     DASCNL010000531.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1763)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1763)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001111992"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(200..1735)
                     /locus_tag="QF359_07145"
     CDS             complement(200..1735)
                     /locus_tag="QF359_07145"
                     /inference="COORDINATES: protein motif:HMM:NF023222.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HJO86721.1"
                     /translation="MSEAKKIAKVDTDSALGAMTGERYINSLKDGREVFIDGEKVDDV
                     TKHPGFTGIINEMARLYDLQNSDEFKDDMTFVDPDSGVRSSVSWMVPKSADDLKRKRR
                     NSEIWNQQTWGQLGRSHDILAPYIIGALNRKDLFSEVKHPKCDFGENLENYYNYCMKN
                     DLFLTHALGDLQVDRSEQQQNEQRKTQEDLEVALHVVEETSDGVIVTGGKQLSTAATH
                     ANECYISLSATFARRNDPNCVLAFSIPQNTPGLKALAREPHSRWFGTWGHPLQMLDEQ
                     DCMLFFDNVLVPWDRLFMLYDPSPMAKILGAGGGSVNFNFLGWANLCRAQERMKLITA
                     VATLIAESIGVSQYREVASKLGELVTYCHVWDHAMEGVEHEAIESPSGQWSLGHARGL
                     HIWFAQVSGRMLEILREICGAGITMQPSEKDLANPDIRQYLDKYMRGKDVDVEYKSRL
                     FRLAHDLAASSFGIRQDIYEFWHGGDPSRNRINLLKGYDQSEMMDRIKDLVSRPLPHG
                     VEK"
BASE COUNT          443 a          481 c          407 g          432 t
ORIGIN      
        1 ccgcgacagc tacgccgatg gccggaccgc gtacaaagcc cgctacatcc tgatccgccc
       61 ggaccattac attgtctggt gcggtgaaga accgccgacg gatacggcgg caattatagc
      121 gaaagcggtg ggaatataat aaaacgccgg aagcatcttt caacgctccc ggcgcatttt
      181 aattctcact caggtgtttc tacttctcca ccccatgcgg tagtggccgg ctgaccaaat
      241 ctttaatgcg atccatcatt tcactctggt catagccttt cagcagattg atccggttac
      301 ggctcggatc gccgccatgc caaaattcat agatgtcttg gcggatacca aatgacgacg
      361 ccgccagatc gtgggccaag cggaacagcc gtgatttata ctcaacatcg acatccttac
      421 cgcgcatata tttatcgaga tattggcgga tatccggatt ggcgaggtct ttttcactgg
      481 gttgcatggt gatgccagca ccacaaatct cgcgcaggat ttcgagcatc cggccggaaa
      541 cttgggcaaa ccagatatgc aggccacggg catgacccaa ggaccactgt ccgctcggcg
      601 attcaatcgc ttcatgctcg acgccttcca tggcgtgatc ccaaacatgg caataagtca
      661 ccaattcacc tagcttggag gcaacttcac ggtattgact gacgccgatc gattcggcaa
      721 tcaaagtagc tacagctgtg attaacttca tccgttcctg agcacgacac aaattagccc
      781 aacctaggaa attgaagttt acgctacctc cgccggcacc aaggattttc gccatcggcg
      841 aaggatcata gagcataaac aaacggtccc agggcaccaa aacgttatca aagaacagca
      901 tgcaatcctg ctcatccagc atctgcaaag gatgccccca ggtaccgaac cagcgcgaat
      961 gaggctcgcg ggcgagggct ttcaggcccg gtgtgttttg cgggattgag aaagcaagca
     1021 cacaattcgg atcattgcgc cgcgcaaaag tcgccgacaa agaaatgtaa cactcattgg
     1081 catgagttgc cgccgttgaa agctgtttac cgccggtaac aatcacgccg tcactggttt
     1141 cttctacaac atgcagggcg acctccagat cttcctgggt tttgcgctgt tcattttgtt
     1201 gttgttcgct gcggtccact tgcagatcac ccagagcatg ggtcagaaac agatcgtttt
     1261 tcatgcagta gttataataa ttctctaagt tctcaccaaa atcacatttt ggatgtttga
     1321 cttcgctgaa aaggtccttg cggttgagcg caccaataat ataaggcgcc agaatatcgt
     1381 gagaacggcc aagctgcccc caggtttgct ggttccaaat ttcactattg cggcgctttc
     1441 ttttcaaatc atcagctgat ttcggcacca tccaggaaac cgaagagcgc accccggaat
     1501 caggatcaac gaacgtcata tcatctttaa attcatcgct gttctgtaaa tcatacaggc
     1561 gggccatctc attgatgatg ccggtaaaac ccggatgctt ggtgacatca tccactttct
     1621 caccatcaat aaaaacttcg cggccgtctt tcaggctatt gatgtaacgt tctccggtca
     1681 tagcgccaag ggcgctgtcg gtatcaactt tcgctatttt tttcgcttca ctcatggggc
     1741 aatctccttt ttactaatta tca
//
LOCUS       DASCNL010000532         1496 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001112182, whole genome shotgun sequence.
ACCESSION   DASCNL010000532 DASCNL010000000
VERSION     DASCNL010000532.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001112182"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="QF359_07150"
     CDS             <1..202
                     /locus_tag="QF359_07150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HJO86722.1"
                     /translation="IHVREALMHCAKAIMRSKLWDPSSQLDHKEFAATKIIAAHTNSE
                     YETLHNSYEKGMADAMAEEGRE"
     gene            202..1065
                     /locus_tag="QF359_07155"
     CDS             202..1065
                     /locus_tag="QF359_07155"
                     /inference="COORDINATES: protein motif:HMM:NF019474.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO86723.1"
                     /translation="MSDLYRGFDQEELDTQYRATGTVPSLDPFLEAYADGSTEAKIAL
                     DYAADIQFGPGDEETLDLFPVPGKSDAPLFVFIHGGYWRMLSKNESSFMAPNLVNEGV
                     AVAAINYTLVPPANIDQIVAECRRSVEWLYKNGATHGIDPNRIYVGGSSAGGHLTGMM
                     VAGGWQEDLGLPTDMVKGGLPISGLLDMEPITQCFVNDWMRMSLEDGLRNSPDRNLPD
                     TGCPLIVAVGGEETDEFKRQSQDFTELWLSKGWPAEYLECTGLNHFNVPMELCKPDSS
                     MTQKLLTMINN"
     gene            complement(1311..>1496)
                     /locus_tag="QF359_07160"
     CDS             complement(1311..>1496)
                     /locus_tag="QF359_07160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86724.1"
                     /translation="ELPQFSDGTYFGYDISEAMIKGAKQQITDPRAPFINSHQVTELA
                     DYSFVSGTCNMKMDAPD"
BASE COUNT          390 a          332 c          405 g          369 t
ORIGIN      
        1 aattcatgtg cgggaagcac tgatgcattg tgccaaagca atcatgcggt ccaagctttg
       61 ggatccatcg tctcagcttg accacaaaga atttgcagcg acgaaaataa tcgctgccca
      121 taccaactca gaatacgaga cactgcataa cagctatgaa aaaggcatgg cagatgcgat
      181 ggcagaagag ggccgggagt gatgagtgat ctttaccggg gatttgatca agaagagctg
      241 gatacgcaat atcgggcgac ggggaccgtg ccgtcacttg atccgttttt ggaagcctac
      301 gccgatggca gtaccgaagc taagatcgcg ttggattacg ccgctgatat tcagtttggc
      361 ccgggtgatg aagagaccct cgatctgttt cctgtgccgg gcaagtcaga tgcgccgctg
      421 ttcgttttta ttcatggtgg ctattggcgg atgttatcga aaaacgaatc cagctttatg
      481 gcgcctaatc tggtgaacga aggcgttgcc gtggcggcga tcaattacac actggtgccg
      541 ccggcaaata ttgatcagat tgttgccgaa tgccgacgct ctgtcgaatg gttatataaa
      601 aacggggcca cgcacggcat tgatcccaac cgcatctatg tcggtggctc gtcggcgggc
      661 gggcatttga ccggtatgat ggttgccggc ggctggcagg aagatctcgg cttaccaact
      721 gatatggtca aaggtgggtt gccgatcagc gggttgctgg atatggagcc gatcactcaa
      781 tgtttcgtca atgactggat gcggatgagt ttggaggatg gcttgcgcaa cagtccggat
      841 cgcaatctac ctgatacagg ctgcccgctt attgtcgctg ttggcgggga ggaaactgac
      901 gagttcaaac ggcaaagcca ggacttcacc gagctctggc taagtaaagg ctggccggca
      961 gagtatctcg aatgcaccgg gctcaaccac ttcaatgtgc cgatggagct ctgcaagccg
     1021 gacagttcga tgacccagaa actcctgacg atgataaata attaatcgac tgttgataaa
     1081 ttaacgaagt tgtgaatacc tttgaattta acgacaatcg aaaattaact atgttaccgc
     1141 cgattttagc cattttgtgg tattaatata atttaacaac agtctggaat taacgaagat
     1201 gtgaatttat gtgaattact caacagttga taattaaccg aaactcctgg cgatgattga
     1261 ctaaaattac ttccggacaa aaataatgaa tttcattagg atgaagcagg tcaatcaggc
     1321 gcatccatct tcatattgca ggttccggag acaaacgaat aatccgccaa ttccgtcacc
     1381 tgatggctgt tgatgaacgg tgcgcggggg tctgtgatct gttgtttggc gcccttaatc
     1441 atggcctcgc taatgtcgta gccgaaataa gtgccgtccg agaattgcgg cagctc
//
LOCUS       DASCNL010000533         1144 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001119248, whole genome shotgun sequence.
ACCESSION   DASCNL010000533 DASCNL010000000
VERSION     DASCNL010000533.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001119248"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1093)
                     /locus_tag="QF359_07165"
     CDS             complement(<1..1093)
                     /locus_tag="QF359_07165"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HJO86725.1"
                     /translation="MPTRVLLYLYADNNGIPGLVLRVVAQLVLAFILFGKLLEISGGS
                     AFFNDLALGWMGHRRGGPAKVAVVASAAFGSISGSTVGNIMSTGVVTIPLMKKAGFQA
                     KYAAAIEAVASNGGQIAPPIMGATAFIIAEFLEVPYQDVVLAALIPAALYFLVLFLQV
                     DAIAARFGLSGLSKSELPLSLQVFLKGWLFLLPIGILLYYLFWLGFNPGLSAMFACIA
                     LALLMVVKNRRLPSVSELSDFIFGGGENLVPLILIAGAAGVVIGVLNATGLAFQLALL
                     LTALGKSMGILVMLILTAFIAIILGMGMPTAAVYIVLVTVVAPALIDMNIVPMAAHLF
                     LFYFGLLSMLTPPVAVASMVAAGLAGSDMW"
BASE COUNT          364 a          321 c          265 g          194 t
ORIGIN      
        1 gccacatatc cgatcccgcc aaaccagcag caaccatgct ggcaaccgca accggtggcg
       61 ttaacatact cagcagaccg aaataaaaca gaaacagatg cgccgccatg ggcacaatat
      121 tcatatcaat caaagccggc gcaactaccg ttaccagcac gatatagacg gcggccgttg
      181 gcatacccat accgaggata attgcaatga atgccgtcaa gatcagcatc accaaaatcc
      241 ccatactttt gccgagagcg gtgagcagaa gcgctaactg aaacgccagg ccagtagcgt
      301 tcaagactcc aatgacaact ccggccgcac cggctatcag aatcaacggc accagatttt
      361 cgccaccgcc aaaaataaaa tctgacaact cactcacact cggcaggcgg cggttcttaa
      421 ccaccattaa caacgccaag gcaatgcagg cgaacattgc cgacaatcca ggattaaaac
      481 caagccagaa taaatagtac aggagaatac caatcggcag taggaacagc cagcccttta
      541 gaaacacttg aagcgataag ggcagttcgg atttcgacag accggacagg ccgaaccgcg
      601 ccgctatagc atcgacctgc aagaacagta cgaggaaata aagtgctgct ggaatcaagg
      661 ccgccaacac aacatcctga tatggcactt ctaaaaattc agcgataata aacgccgtcg
      721 cgcccataat tggtggggcg atttggccac cattagaggc cactgcctca atagccgcgg
      781 catacttggc ttggaaccca gcctttttca tcagcggtat tgtgacgacg cccgtggaca
      841 taatattgcc gacggtggag cctgagatgg agccaaaggc agcagaggcg acgacagcga
      901 ccttagccgg tccgccccgg cgatggccca tccagcctaa agccagatca ttaaaaaagg
      961 cggaaccacc actgatttcc agcaacttac caaagagaat gaaggccaac actagttgcg
     1021 ccacgacgcg taaaactaat cctggtatgc cgttattatc agcgtaaagg tacaacaaaa
     1081 ccctggttgg cagaaatact acggcttcaa atggcggtgg taaaagatca ccaaaaaagc
     1141 agta
//
LOCUS       DASCNL010000534         1915 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001119421, whole genome shotgun sequence.
ACCESSION   DASCNL010000534 DASCNL010000000
VERSION     DASCNL010000534.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001119421"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(127..1536)
                     /gene="argH"
                     /locus_tag="QF359_07170"
     CDS             complement(127..1536)
                     /gene="argH"
                     /locus_tag="QF359_07170"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HJO86726.1"
                     /translation="MSDTTKKDTGSSTIWGGRFDGGPSEIMERINPSIDFDQRMYAQD
                     IAVSKAHAAMLVEQNIISAEDGARISDGLDQILGEIEAGDFEFKTELEDIHMNVEARL
                     TKIVGEAAGRLHTARSRNDQVATDFKLWVRDELDQLDHDLHSFQSVLITRAEEHAATI
                     IPGYTHLQTAQPVTLGHHLLAYVEMIGRDRGRVVDCRARLNENPLGSGALAGTSFPIN
                     RQTTTAALGFDAPTANSLDAVSDRDFALEYLSLASILSVHLSRLAEEIIVWASASFGF
                     VNLPDSFSTGSSMLPQKRNPDAAELVRAKSGRVIGNLNSLLIVMKSLPLAYSKDMQED
                     KEPVFETADTLALTIAAMTGMFEEITFNSDNMLAAAMAANSNAIDLADWLVRVLGKPF
                     REAHHISGAMVKLAESKDCMLEELSLEDMQGIEPGITAEVLSVLDVEQALKARSSFGG
                     TAPANVKDACAQARQKYLG"
BASE COUNT          473 a          501 c          411 g          530 t
ORIGIN      
        1 gtttacccag ctcgcttttc ttgccgcacg ctgacatgat tggcagcgtc attaaagcga
       61 ccaataacga taatatccat ttttgcatac gatgtcggtt catctgcata aatccaaaac
      121 tatctattag ccaagatact tctgccgcgc ttgagcgcaa gcgtctttca cgtttgccgg
      181 agctgttccg ccaaagcttg accgagcttt caatgcctgt tcaacatcca gcacagataa
      241 aacttctgcc gtgatacccg gttcaatacc ttgcatatct tcgagcgaaa gttcttctaa
      301 catgcaatcc ttactttcgg ccagttttac catcgcgcca ctaatatgat gggcttcccg
      361 aaaaggtttg ccaagaactc tgacgagcca atcggccaag tcaatggcat ttgaattcgc
      421 cgccattgcc gccgccagca tattatcaga attgaaggtg atttcctcaa acatgccggt
      481 catcgccgcg atcgtgagcg ccagcgtgtc agcggtctca aataccggtt ctttatcttc
      541 ttgcatgtct ttactgtaag ccaatggcag gcttttcatg acaattagca ggctattgag
      601 attgccgatt actcggcccg atttagcccg caccagttcc gcagcatccg ggtttctttt
      661 ttgcggcagc atcgaactgc cggtggaaaa actatccggt aaattgacaa aaccgaaaga
      721 tgcacttgcc caaacaataa tttcctcggc cagccgtgac agatgaaccg aaagaattga
      781 ggccagcgat agatattcaa gggcaaaatc ccgatccgaa acggcatcca aggaattcgc
      841 tgtcggtgcg tcaaagccga gcgccgcagt ggtggtctgc cggttaatcg ggaaagacgt
      901 tcccgccaga gcacctgatc ccaatggatt ttcgttcaat ctcgcccggc aatcgaccac
      961 ccggccccga tcccggccga tcatttcgac ataagctaac aaatgatggc caagtgtaac
     1021 cggttgcgcc gtctgcaaat gcgtatagcc tgggatgatt gtcgctgcat gttcttcggc
     1081 gcgcgtaatc aacacagatt ggaaggaatg caggtcatga tccaactggt cgagttcgtc
     1141 tctgacccat aatttaaaat ccgtcgccac ttggtcattt ctggaacgcg ctgtatggag
     1201 acggccggca gcttcaccga ctattttggt taaccgggct tcgacattca tgtgaatatc
     1261 ttcaagctcg gttttaaatt caaaatcacc ggcttcgatt tctcccaaaa tttggtcgag
     1321 cccatcactt atccgcgccc catcttcggc cgaaatgata ttttgttcga cgagcatcgc
     1381 tgcatgcgct ttggatacag ctatatcctg ggcatacatc cgctgatcaa aatcgatgga
     1441 agggtttatc cgctccatga tttctgacgg cccaccgtca aaccgaccac cccaaatggt
     1501 gctcgaacca gtatcttttt ttgtcgtgtc actcatagtc aaaatacaaa tttccattgg
     1561 gaatcgatat tcccgttaaa ggacgcgcta taatggtcat atccggcgcg caatcaagtg
     1621 taatgctatg atatttatac tgaaattggg gttaaaaagc aggaaattat gcttttaccg
     1681 gctttttgct gatttttgcc atttttaccg cctcttcatc ttcttctttt tgggcctgtt
     1741 ttagcttttt ctaccatttg ataatttcat ctttttggcc gcgccatttt aactcaacgt
     1801 tggtgccgac cgaatcttct tgatcttcgt tgaaatctcc agacatgaaa tcaccaaatt
     1861 cttcgacaac aggtgtgaga taaattgtgg caaattccgg ctcacgtaac acgag
//
LOCUS       DASCNL010000535         1203 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001120972, whole genome shotgun sequence.
ACCESSION   DASCNL010000535 DASCNL010000000
VERSION     DASCNL010000535.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001120972"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="QF359_07175"
     CDS             complement(<1..323)
                     /locus_tag="QF359_07175"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO86727.1"
                     /translation="MAALKSFGGVGRALRNRNFRRYWFGLVISTIGFWMFRVTLGWYT
                     WEITNSPAWLGIIGFASLIPILVFGPIAGALSDRIGHKRVAMSSMVLSSIITFIMAYL
                     IAAEL"
     gene            complement(349..>1203)
                     /locus_tag="QF359_07180"
     CDS             complement(349..>1203)
                     /locus_tag="QF359_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86728.1"
                     /translation="LGKYTERVYPVALDALHDYDPVWQHCIDLKIPVGCHTAARGGGG
                     RHSSPSNFVFNHLGGFSTAGDYFCRSIFMGGVTRRFPELNFAFLEGGVGWAVQLYNDL
                     FEHWEKRNYKFMVENLDPAKLDTDLIWEMAEKYGDGIITADALLVEHKTSQMGGDVGS
                     DVELDEFRRCEITKKEDIRELFVEPFYFGCEADDAMNAIAFNTKINHYGARLKAFFGS
                     DIGHWDVEDIRHCVPDAYKNVEKELFTNQDFEDFMFTHPVGLYTRQNPEFFKGTIVED
                     QVDQLLAG"
BASE COUNT          358 a          305 c          263 g          277 t
ORIGIN      
        1 atcaattcgg cggcaattag ataggccatt ataaaagtaa taatactgga caacaccata
       61 gaagacatgg cgacccgctt atggccaatt cgatcagaca gcgccccagc gatcggacca
      121 aaaaccaata tcggtataag cgaggcaaac ccaatgatcc ctagccaggc cggtgagttg
      181 gtaatctccc aggtgtacca gccgagcgtc actcggaaca tccagaaacc aatggttgat
      241 attacgaggc caaaccaata acggcgaaaa ttgcgattac gtaaggcgcg gccaacgccg
      301 ccgaaggatt ttagtgcggc caaaagaaag tcctttaggt taggctaatc agccagcaag
      361 taactggtca acctggtctt cgacaatggt gcccttaaag aactctggat tttgccgcgt
      421 gtaaagccct accggatggg tgaacataaa atcttcgaaa tcctgattcg tgaacagttc
      481 tttttcaaca tttttatatg catccggcac acaatggcgg atgtcttcaa catcccagtg
      541 accaatatca gagccaaaaa acgccttaag cctggctcca taatgattta tcttagtgtt
      601 gaaagcgatg gcgttcatgg cgtcatccgc ttcacaacca aaatagaatg gttcaacaaa
      661 aagttctcga atatcttctt tcttagtaat ttcgcaacgg cggaattcat caagttcaac
      721 atcactgcca acatctccac ccatctggct ggttttatgc tcaactaaaa gagcgtcagc
      781 ggtaataata ccatcaccat atttttcggc catttcccag ataagatcgg tatcaagttt
      841 agccggatcc agattttcga ccatgaattt ataattccgc ttttcccaat gctcgaacag
      901 atcattgtag agctgcaccg cccaaccaac gccaccttcg aggaaggcaa aattcagctc
      961 gggaaaacgc cgggtaacgc cgcccataaa tattgagcgg cagaaataat cgcccgctgt
     1021 tgaaaagccg ccgagatggt taaagacaaa atttgaaggt gaggaatgtc gcccgccgcc
     1081 gcctcgggct gccgtgtgac agccaaccgg gattttaaga tcaatgcagt gctgccagac
     1141 cgggtcataa tcatgcaagg catctagcgc cactggataa acccgttcag tatatttgcc
     1201 aag
//
LOCUS       DASCNL010000536         2722 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001121422, whole genome shotgun sequence.
ACCESSION   DASCNL010000536 DASCNL010000000
VERSION     DASCNL010000536.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001121422"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(255..1115)
                     /gene="nadC"
                     /locus_tag="QF359_07185"
     CDS             complement(255..1115)
                     /gene="nadC"
                     /locus_tag="QF359_07185"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HJO86729.1"
                     /translation="MALEWPDGLDLDLVDKIIDAAFAEDIGRGDLTSEAVIPTDTSFS
                     GVMSARQKMVCTGLPVAGRVFERYSDKITWNAKAQDGDLVAAGSILAELTGPAIELLT
                     AERTAINILQHLSGIATLTREYADKIADLDTILLDTRKTIPVYRQLAKYATRMGGATN
                     HRMALDDGVLIKDNHVAISGGIAEAVRRAKASNLPNIEVECDTLEQVKEAVDAGADMI
                     LFDNMSAEMMAKAVTIVAGRLPTEASGDVNLTTIRAKAESGVTYISVGALTHSAPAVN
                     IGLDWSAEIL"
     gene            complement(1124..2140)
                     /gene="nadA"
                     /locus_tag="QF359_07190"
     CDS             complement(1124..2140)
                     /gene="nadA"
                     /locus_tag="QF359_07190"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HJO86730.1"
                     /translation="MIDTVVEAGAGALTADALDPFIDIEEEINSLRREKNAVILAHYY
                     QAPEIQDIADFVGDSLDLSRKAAETDADMIAFCGVKFMAECAKTLSPNKIVVLPDSEA
                     GCSLEDSCPPEDFKKFREKFPDHLALSYVNCSAEVKALSDIIVTSSNAKSILDQIPPE
                     QKIIFGPDRHLGAYLAKESGRDVEIWPGTCIVHEQFNERELVKLMVRHPKAKLAAHPE
                     CPESILKHADHVGSTRSLLEFVTLSEGKEFIVATEQHIIHQMELAAPDRTFIAAPGPD
                     GTCNCANCPFMAMNDLDKLYLAMLNEAPRIEMPEDLRLGALAPLQKMLDMSPAQPAKK
                     SVAA"
BASE COUNT          690 a          644 c          673 g          715 t
ORIGIN      
        1 atcgtaaccc gaaacctcgt ccccggcagg tcaggcggtg cttggcaggc atgtttgggc
       61 cacaaacatt gtcaaaagcg gcggataggt gtcgagcgtt cctggctcac ttaactgatc
      121 ggcatagcga tagagaatga aaaatctttg gtgtttgagg ccaagtaagg tctgcaaacc
      181 catttttaaa aggcggccat aaggcggttt agacatgtaa tttctagaaa atgacgtggg
      241 taacttccaa gggattatag gatttcagcg ctccaatcca acccaatatt gacagccggt
      301 gcggaatggg tgagggcgcc gaccgaaata taggtaacac cggattctgc cttggcgcga
      361 atggtcgtta aattgacatc accggaagcc tcggttggca accggccagc aacaatggta
      421 acggccttag ccatcatttc cgcactcata ttgtcgaaca ggatcatatc cgcgccggcg
      481 tcgactgctt ctttaacttg ctcaagggtg tcacactcaa cttcaatatt gggcagattg
      541 ctggctttgg cgcggcgtac ggcttcggcg atacctcctg atatggcgac atgattgtct
      601 tttatcaaca cgccgtcatc gagtgccatc cggtgattgg tcgctccccc catgcgggtc
      661 gcgtatttgg ccagttgtcg atagactgga atggtttttc tggtatccag taagatcgtg
      721 tcgaggtcag caattttatc ggcatattcc cgagtcaggg tggcaatacc cgacaaatgc
      781 tgcaaaatgt tgatggcagt gcgttctgcg gtcagtaatt caatcgccgg ccccgtcaat
      841 tcagccaata ttgaaccagc tgcgaccaaa tctccatcct gtgccttcgc gttccaggtg
      901 attttgtctg agtagcgttc aaacaccctg ccggcgaccg gcaaaccggt gcaaaccatc
      961 ttttggcgcg ccgacattac gccgctaaaa ctggtatccg tggggataac cgcctctgac
     1021 gttaagtcgc cacggccaat gtcctcggca aaggcagcat caataatttt atcgacaaga
     1081 tctaaatcaa gaccatccgg ccattctaac gccatatcag gaattaagcc gcaaccgatt
     1141 tcttagctgg ctgagctggc gacatatcta gcattttttg caatggagcg agagcaccaa
     1201 gacgaaggtc ttccggcatt tcgatgcgcg gcgcttcgtt caacatagcc agataaagtt
     1261 tatccaaatc attcatagcc ataaacgggc agttcgcgca gttacaggtg ccatctggcc
     1321 ccggtgcggc aatgaatgtc cgatccggcg cggcgagctc catctgatgg atgatgtgtt
     1381 gttcggtggc aacaataaat tcttttcctt cagataaagt cacgaattct agcaatgaac
     1441 gtgtcgagcc gacatggtcg gcatgtttga gaatactttc cgggcattcc gggtgcgccg
     1501 ctaatttggc cttcggatga cgcaccatta acttgaccag ttcacgctca ttaaattgct
     1561 cgtgaacgat gcaggtgccg ggccagattt ccacatcccg gccggattct ttggcgagat
     1621 aagctccgag atgacgatcc ggaccaaata ttattttttg ctctggcggt atttgatcaa
     1681 ggatactttt ggcattggag gaagtaacga taatgtcgga aagcgctttg acttcggcag
     1741 agcagtttac atagctaagc gccaaatgat ccggaaattt ctcacggaac tttttgaagt
     1801 cttccggcgg gcaggaatct tccagtgaac acccggcttc gctatccggt aataccacga
     1861 ttttgtttgg acttaatgtt ttggcacatt cagccataaa tttaacgccg caaaatgcga
     1921 tcatatcggc atctgtttcg gcagctttgc gggataggtc taaggaatca ccaacaaaat
     1981 cagcaatatc ctggatttca ggtgcttgat aataatgcgc caggatgacg gcattcttct
     2041 cgcggcgcag gctgttgatc tcttcttcaa tatcgatgaa gggatccagg gcatccgctg
     2101 tgagggctcc ggcacctgct tcgacgacag tatcaatcat gcgactaaca attcctcgtc
     2161 gctgtggttc aaaaaaccaa gtttttactt ggttataatt ggaaatttgt cctaaatgcc
     2221 aattaagtca agtctgttcg taaaaacagt tacgttatta gcctaattcc aatttattgt
     2281 caggaagcgc gttatgccga tactgaagaa aatccaggat atccatgcgg aaataacttc
     2341 ctggcgtcag taactccatg agcgtcccga aacagccttt gaagaagtta agatctcgga
     2401 tcttgtcgct gaggagttaa ttgaattcgg catagaagtt aaccgtagct gggctaaaac
     2461 cggcgttgtc ggcacgttga agaatggcag cggtttggga tttagtcttg tgcacgctgt
     2521 cgcgtaatag cattgtgccg atatcgaact cgataacaat ctgccaggtt tgagagttgt
     2581 cttacgtttt gaagaacaag agtccaatca agtttaagta attaattcca tgactgaaga
     2641 cattcaattt aaccaaaaat tcgagtgtga gtatggtgtg atgattgagg tcaccccatt
     2701 gatccgacgc attgttgcca at
//
LOCUS       DASCNL010000537         1626 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001122800, whole genome shotgun sequence.
ACCESSION   DASCNL010000537 DASCNL010000000
VERSION     DASCNL010000537.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001122800"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /locus_tag="QF359_07195"
     CDS             complement(<1..957)
                     /locus_tag="QF359_07195"
                     /inference="COORDINATES: protein motif:HMM:NF020028.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HJO86731.1"
                     /translation="MAASGPSLADEIPIWDLNDLYSGSDDPKIKQDLDFVAEGAKTFA
                     DKYRGKLNDLDGAELGQSIKEYEDLSEVLSRVMSYAQLSFAVEAENSIIAAFYQNMNE
                     RATDISSITLFFELELNRIADKTLATQMKDPGVTKYAPWIDAIRIFKPYQLEDNLEKL
                     LHEKSVTGRSTWSRLFDETMAGMRFDVDGRKISSSEIMSRMSDPDVSVRKKAAKAFGK
                     GLGENIKLASLITNTLAKDKEIEDNWRKLPRPVTNRNLSNQVEDEIVDALASTVKDNY
                     ENLAHRYYKLKAKWLGVEVMDYWDRNAPLPESDDAKIPWSEAK"
     gene            1095..>1626
                     /locus_tag="QF359_07200"
     CDS             1095..>1626
                     /locus_tag="QF359_07200"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86732.1"
                     /translation="MKSWPSLIAMFFEQAETLGDKPFLWAKKDGAYQSTSWRESAEIV
                     SALARGLKTLGINEGDRVLLCSENRPEWPVAHLAIMAAGGITVPAYTTNTVSDHSHIL
                     SNSGAKGAIVSTKELGGRLVPAATQTGGVNFIISIDDLGLSQSPGPDIHNWSSIVEKG
                     QAEPDTITDYVANVSRE"
BASE COUNT          412 a          400 c          379 g          435 t
ORIGIN      
        1 cttcgcttca ctccagggaa ttttagcatc gtccgattct ggtaatggcg cattacggtc
       61 ccagtaatcc atcacctcaa caccgagcca tttggctttt aatttgtagt agcgatgagc
      121 aagattttcg taattgtctt taacagtgga tgccaacgcg tcaacgattt cgtcctcaac
      181 ctggttggag agattacgat tggtaaccgg acgtggcaat ttgcgccagt tatcttcgat
      241 ctctttatcc ttggcgagtg tgttggtaat caatgaggcc agtttgatat tttcaccgag
      301 ccctttgcca aatgccttag ctgctttttt acggacgcta acatcgggat cggacatccg
      361 actcataatc tcgctgctcg agattttccg gccatcaaca tcgaagcgca tccccgccat
      421 cgtctcatca aataaacggg accaggtcga gcggccggtt acagattttt catgcagcag
      481 cttttcgaga ttgtcttcca actggtacgg cttaaagatg cggatggcat cgatccaagg
      541 tgcatatttg gtaacgcccg ggtctttcat ttgagtagcc agtgttttgt ctgcgatgcg
      601 attaagttct aactcaaaaa ataaagtgat cgacgatatg tctgtcgccc gctcattcat
      661 gttttggtag aaggcggcga ttatcgagtt ttcagcctcc accgcaaacg acaattgcgc
      721 gtaagacata acccgcgaca aaacttcgct tagatcttca tattccttga tcgattggcc
      781 caattcagcg ccatcgagat cgttaagttt tccccgatat ttatcggcga aagtctttgc
      841 cccctccgca acaaaatcta aatcctgctt gattttcgga tcatccgacc cgctataaag
      901 atcattcaaa tcccagatcg gaatctcatc agctaaactc ggtccggaag cggccataaa
      961 aaaaatcctt atcgatattt gttttgccgg taaaacatgc tacatgattc cggtgaataa
     1021 cagcgtatac tatcgatata ggtcaaaaga ccggatgctt caaatccgta aagtttaata
     1081 ggggctctaa tagaatgaaa tcctggccaa gtctgatcgc catgtttttt gagcaggccg
     1141 aaacattggg agataagcca tttctgtggg ccaagaagga tggagcctac caatcaacga
     1201 gctggcgcga atctgctgaa atcgtctcgg cactggcccg tggccttaag acgttgggca
     1261 tcaacgaggg ggaccgggtc ctgttgtgct cggaaaaccg gcccgaatgg cccgtagcgc
     1321 atcttgccat aatggctgct ggcggcatta cagttccagc ttatacgacg aacacggtta
     1381 gcgaccattc tcatattctc tccaatagtg gcgccaaagg cgctattgtc tcaaccaaag
     1441 agcttggcgg acggttggtg ccggcagcga cgcaaaccgg cggcgtcaat tttataattt
     1501 caattgatga tttgggttta agccagtcac cgggtccgga tattcacaac tggtcatcaa
     1561 tcgttgaaaa aggccaagct gagcctgaca cgattactga ctatgtggcc aatgtatcac
     1621 gcgaag
//
LOCUS       DASCNL010000538         1958 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001123000, whole genome shotgun sequence.
ACCESSION   DASCNL010000538 DASCNL010000000
VERSION     DASCNL010000538.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001123000"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="QF359_07205"
     CDS             <1..233
                     /locus_tag="QF359_07205"
                     /inference="COORDINATES: protein motif:HMM:NF024997.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HJO86733.1"
                     /translation="EVGRWKNNRCENSHLPFRRREYAMLKFRRMRSLQKFASIHSSVF
                     NHFNKERHLNSRETYKVQREAALVEGQQLCAA"
     gene            509..634
                     /gene="ykgO"
                     /locus_tag="QF359_07210"
     CDS             509..634
                     /gene="ykgO"
                     /locus_tag="QF359_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007281615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HJO86734.1"
                     /translation="MKVRSSLKSAKARDKNCRVVRRRGRLYVINKQKPRFKARQG"
     gene            772..>1958
                     /locus_tag="QF359_07215"
     CDS             772..>1958
                     /locus_tag="QF359_07215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO86735.1"
                     /translation="MHMPEPDAAIIAKRPEIVDQLNRLVPAGPFGTNVITDPDGLRAY
                     ECDGLSAYRQLPMVVVLPETTVQVSEILKYCDGAGVKVVPRGAGTSLSGGALPLADGV
                     MLGLGKFNKVLNIDYANRAVVTQPGVTNLAISEAVSYHGFYYAPDPSSQIACSIGGNV
                     AENSGGVHCLKYGLTTNNVLGVEMVLINGDIIRLGGKHLESEGYDLLGLVTGSEGLLG
                     IITEVTVRILHQPDTARAMLVGFDSAALAGDCVAAIIGAGIIPGGMEMMDKTAIHATE
                     EFVQAGYPLDAEALLIVELDGPEAEVDHLIDRVQEIATDLGAGYFRVSINESEREKFW
                     AGRKNAFPAVGRITSDYYCMDGTIPRARLPEVLKRMEEMSEKYELRVANVFHAGDGNL
                     HPL"
BASE COUNT          482 a          426 c          535 g          515 t
ORIGIN      
        1 aagaagtagg gcggtggaaa aacaacagat gtgagaactc tcaccttcct tttcggcggc
       61 gagaatatgc gatgttgaag tttaggcgga tgcgaagttt acaaaaattt gcctcaatcc
      121 actcatcagt tttcaatcac ttcaataagg aacgccatct aaattctaga gaaacatata
      181 aggttcaacg tgaagctgct cttgttgagg ggcagcaact ctgtgctgca taaattcctg
      241 gattttgcga tctacagaga ctggttcgca ttcgtctgac agcaccctaa tccgggaatg
      301 tgaatactgg atttaccgga tggcggcttt agatagcggc aggcttaaag tttatcacta
      361 ccacgcaatt aagggaatcg gttaaaaaag gctaaaaaaa tttgtaaaaa gatggctgca
      421 ggcgttgaca gatgaaggat tgcctcctat tttcccgcat ctttcgtcgc cagtcgaggc
      481 ggcattgtac tgttatgagg acggcaaaat gaaagttcgt agttcgctta aatctgcgaa
      541 agcaagagat aagaactgtc gcgtcgtgcg acggcgtggt cgtctgtatg tgattaacaa
      601 acagaaaccc cgctttaagg cacgccaagg gtaaaatata accctttccg gcaattaaaa
      661 attattgaac cgcgctggtg gataagtatc tataagcgcg gttttgcttt ttctgatgcc
      721 gacaattctc tattctatct ctccgtattt tgttggagga ggatagtcgc catgcatatg
      781 cctgagcctg atgctgcgat catagccaag cgtcctgaaa ttgtagatca gctcaatcgc
      841 cttgtacccg ccggcccttt tggcacgaat gtcataaccg atccggatgg gctgagggct
      901 tacgaatgtg atggcttatc cgcctatcgc cagttaccga tggtagtggt gttgccggag
      961 acgactgtgc aagtgtcaga aattctcaaa tattgtgatg gcgcaggcgt gaaagtggtg
     1021 ccgcgtggtg ccgggacatc gttgtcgggc ggcgctctac ctctggccga tggggtcatg
     1081 cttggcctcg ggaaatttaa taaagtcctc aatattgatt acgctaatcg ggcagttgtt
     1141 actcaacccg gtgtgactaa cttagctatt agtgaagccg tttcctatca tgggttctat
     1201 tacgcgcctg acccctcgag ccagatcgcg tgttcgatcg gtggcaatgt cgccgagaat
     1261 tccggcggtg tgcattgctt aaaatatggc ttgaccacaa acaacgtttt gggcgttgaa
     1321 atggtgctga ttaatggcga tatcattcgg ctcggcggta agcacttgga atcggaaggc
     1381 tatgatctgc ttggtctggt gaccggctca gaaggattgc ttggtattat cactgaggtc
     1441 acggtccgta ttttgcacca gcccgacact gcacgggcga tgctggtcgg ttttgatagt
     1501 gccgcgctgg ctggggattg tgtggcggca ataattggtg cgggcatcat cccaggcggt
     1561 atggaaatga tggataaaac ggccatccat gcgaccgaag aatttgtcca agccggctac
     1621 ccgttggatg ccgaagcact gttgatcgtt gagctggatg gtccggaagc cgaagttgat
     1681 catttgatcg accgggtgca ggaaatcgcg actgatttgg gtgccggcta tttccgagtt
     1741 agcataaatg aatctgagcg ggaaaagttt tgggcaggcc gaaaaaatgc ctttccagcg
     1801 gttggccgta ttacctccga ttattattgt atggatggca caatacctcg ggcgcgactg
     1861 ccggaagttc tcaaacgcat ggaggaaatg tcggaaaaat atgagcttcg tgttgccaat
     1921 gtattccatg ccggtgacgg taatctgcac ccgctaat
//
LOCUS       DASCNL010000539         1260 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001125160, whole genome shotgun sequence.
ACCESSION   DASCNL010000539 DASCNL010000000
VERSION     DASCNL010000539.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001125160"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            105..572
                     /locus_tag="QF359_07220"
     CDS             105..572
                     /locus_tag="QF359_07220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86736.1"
                     /translation="MAPGGRSVTIFYTLSENPKQLKKNINFEDYKEFRNMMGEGLSFL
                     IIIEHRIQLNGSSKKERLEEKYEELTVLIWLVLLDGSLNYFSVISEKDFLPIGTHHIF
                     MQKLKTLYDGENILKQVKFQDRLNNTVLDKRDKAERVLETIIDRAPQLLNITG"
     gene            complement(589..>1260)
                     /locus_tag="QF359_07225"
     CDS             complement(589..>1260)
                     /locus_tag="QF359_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HJO86737.1"
                     /translation="PAMGWRAIRVSLDRPVLMRHQLRALIRVAQGHDLSIMFPMITEI
                     AEFDAARKLLDLELVRAEKKGRTSIKSLNVGAMMEVPALAYQMPALLKRVDFLSVGSN
                     DLFQFLFASDRGSPRIADRYDPLSPAALNFLGSLIEQCDAAQTPISLCGEMAGRPLDA
                     MALVGLGLRSLSMAPSSIGPVKTMIRSLSAGDLKHYLDSLHDVAEHSLREKLREFAVD
                     HGVMI"
BASE COUNT          358 a          314 c          294 g          294 t
ORIGIN      
        1 caatgcatat agaacacccg atatggtctg aaaaatagaa aatacattta tcaaaatcga
       61 cataccattt ttccacgccg cgaaccattt gtttggtatc aaaaatggca ccgggcgggc
      121 gttcagtgac tattttttac acgctgtccg aaaaccctaa gcaactcaag aaaaacatta
      181 actttgagga ttataaggag ttccgcaata tgatgggcga gggcctgtca tttctgatta
      241 ttatcgagca ccgcatccag cttaatggaa gttcaaaaaa ggaaagactg gaagaaaagt
      301 acgaagaact tacagtattg atttggttag tcctgctcga cggttcgctg aattactttt
      361 cagttattag cgaaaaggat tttctgccga ttggcaccca ccatatcttc atgcagaagt
      421 tgaaaacgct ttatgatggg gaaaatatac tgaagcaggt aaaattccaa gatcgcctga
      481 acaataccgt tctcgataaa cgggataaag cagagcgagt tcttgaaacc atcatcgacc
      541 gcgcccctca gctcctgaat ataaccggtt aactccgctg ccaacgagct aaatcatcac
      601 cccatgatcg acggcgaatt cgcgtaactt ttcgcgcaaa ctgtgctcgg cgacatcatg
      661 caaactatcc agatagtgct tcaaatcacc tgctgaaaga cttctgatca tggtcttaac
      721 cggcccgata gatgaaggtg ccattgagag tgaacgtaat ccaagcccga ccagcgccat
      781 tgcatcaagc ggccggcccg ccatttcacc acacagactg atcggtgttt gagcggcatc
      841 acattgctcg atcaaactgc caagaaaatt caaggccgcc ggtgataaag ggtcatagcg
      901 gtcggctatt cgggggctgc cgcgatcact ggcgaacaaa aactgaaaga gatcattgct
      961 gccgacagat aagaaatcga cccgtttcaa caaagccggc atttgatagg cgagggcggg
     1021 cacttccatc atcgcgccga catttaagct tttgattgat gtccggcctt tcttctcggc
     1081 gcgcaccaat tcgagatcaa ggagctttct cgccgcatca aattcagcga tttcggtgat
     1141 catcgggaac attatcgata gatcgtgtcc ttgggcgacg cggatgaggg cacgtaactg
     1201 atggcgcatc agcaccggtc ggtcgagcga taccctgatc gcccgccagc ccattgccgg
//
LOCUS       DASCNL010000540         1784 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001128366, whole genome shotgun sequence.
ACCESSION   DASCNL010000540 DASCNL010000000
VERSION     DASCNL010000540.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001128366"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            159..536
                     /locus_tag="QF359_07230"
                     /pseudo
     CDS             159..536
                     /locus_tag="QF359_07230"
                     /inference="COORDINATES: protein motif:HMM:NF017936.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
     gene            complement(590..1615)
                     /locus_tag="QF359_07235"
     CDS             complement(590..1615)
                     /locus_tag="QF359_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HJO86738.1"
                     /translation="MNVATHPEKLTVKDYASDQEVRWCPGCGDYSIVRAMQKALADIQ
                     APLEKTAFISGIGCASRFPYYMATYGFHTIHGRAASIATGTKLANPDLDIWVISGDGD
                     ALSIGGNHLMHVLRRNVDLQYILFNNEIYGLTKGQYSPTSKVGTRSPSTPQGSIDSPL
                     SATEFALGCGARFVARGIDTLPKHLPEVFKRAHAHKGASFVEVFQNCIVYNDGAYDHF
                     TAKDVAADRQILVEHKKPLIFGADRDQGIRMRPGRIELEVVTISENGVTEADILVHDE
                     TNKSLATLLAHMESPAFPVAIGVLYCDPAETYEAAVHAQVDAEKKAHPKPDLNELLRS
                     GPTWTIE"
BASE COUNT          477 a          416 c          417 g          474 t
ORIGIN      
        1 accgcccagc gggtcggcgt aaaattcttg gagatcaacg acatctaacc acatgggggt
       61 aatatgttct gatttaacag ttttttccag ctatgatatc gtgagcccgt tgttttaata
      121 attggttttt tgaaaatcgg ataagataaa acatcgtaat gaccaaaaaa ttcgttgaaa
      181 atattatcag ggaattcgat ctcacgcccc atcccgaagg tggttactat agcgaaatct
      241 atcgagacct gccgggtgac ggcagtcgcg gggcggtgat ggttatttat ttcctattaa
      301 aagccagaga aaattcggcc tggcatcgta ttgatgcgat tgagatgtag catttctatg
      361 gtggcgcacc gctaaatctc tacttgtcgg aagatggcgc cacagaaaca atattacgtt
      421 tgggaactga taccgcgaac gatgaacgac cgtttcaaat tattcctatg ggtgtatggc
      481 aatcaacgga aagcgccacg ccgattgaaa ttactttttc catccaccta gaataaataa
      541 tcccgccagc attttcaaat gaggtggttt cttgggagaa tttagcaacc tattcgatcg
      601 tccaggttgg cccacttctg agcagttcat tcaagtcagg tttgggatga gctttcttct
      661 cggcatcaac ctgagcatga acggcagctt cataggtttc cgccggatcg caatacaata
      721 ctccgatcgc cactggaaag gcaggtgatt ccatgtgggc taacaatgtc gccagacttt
      781 tattggtttc atcatgcacc aaaatgtcag cttcggtaac accgttttcg ctaattgtga
      841 caacttctaa ttcaatcctg ccaggccgca tacgaatgcc ttggtctcga tcggcgccaa
      901 aaataagcgg ctttttatgt tcgactagaa tttgacggtc ggctgcaaca tccttggccg
      961 taaaatgatc ataagcaccg tcattataaa caatgcagtt ttggaacacc tcgacaaatg
     1021 atgccccttt gtgcgcatgc gcacgtttaa aaacttccgg cagatgtttg ggcaaagtat
     1081 cgatgccgcg ggcaacaaac cgggcaccac agccaagggc aaactcagta gccgatagcg
     1141 ggctgtcaat cgacccctgt ggcgttgatg gtgagcgtgt gccaactttc gacgttggtg
     1201 aatactggcc cttagtgagg ccataaattt cgttattaaa caggatatac tgcaaatcga
     1261 cgttgcgccg taaaacatgc atcaagtgat tgccgccaat cgacaacgca tcgccgtcac
     1321 ctgaaataac ccaaatgtca agatcgggat tggcgagttt ggtgccggtg gcaattgaag
     1381 cagcgcggcc atgaatggta tgaaagccgt aagttgccat gtaataagga aaccgagacg
     1441 cacagccaat tcccgaaata aaggcggttt tttccaacgg cgcctgaata tcggctaagg
     1501 ctttttgcat ggcgcgaaca atcgagtagt cgccgcaacc agggcaccag cggacttcct
     1561 gatcggatgc ataatctttg acggttaatt tttccgggtg tgttgctaca ttcataatat
     1621 tatttcctca aactctcacg gatggcctct tcaacttccg agaccttaaa cggctgacca
     1681 gaagttttat taagcccctg cgcgttgatc agatattcac tgcgcaggac agtaatcagc
     1741 tggccggtat tcatttcggc aactatcact tttttgaatt tctt
//
LOCUS       DASCNL010000541         1256 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001130585, whole genome shotgun sequence.
ACCESSION   DASCNL010000541 DASCNL010000000
VERSION     DASCNL010000541.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001130585"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /gene="rodA"
                     /locus_tag="QF359_07240"
     CDS             <1..878
                     /gene="rodA"
                     /locus_tag="QF359_07240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HJO86739.1"
                     /translation="FVVEFSGSIGMGAQRWIDLGVITIQPSELMKISIILLLARYFYA
                     SRLEDVGRISHIFVPFILLVIPAFLVFRQPDLGTTILLVTTGVVMLFLAGVRAWVFVA
                     GAVATIAAVVPLWKFVLLDYQKQRFLMFIDPEKDPLGAGYHILQSKIALGSGGMFGRG
                     FLEGSQSHLSFLPEKQTDFIFTMLAEEFGLVGGMALIGLYLLLLIYAFAISLRCRSQF
                     GRLIGMGVSTSFFLNIFVNIAMVMGVIPVVGMPLPLISYGGTAMLSLMFSFGLLLCVY
                     VHRDVQIGPGAADGN"
     gene            902..977
                     /locus_tag="QF359_07245"
     tRNA            902..977
                     /locus_tag="QF359_07245"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:935..937,aa:Lys,seq:ctt)
BASE COUNT          235 a          293 c          335 g          393 t
ORIGIN      
        1 tattcgttgt tgagttcagc ggctcaattg gcatgggagc gcaacgttgg attgatctcg
       61 gggtgattac catccagccg tccgagttga tgaaaatatc cattatttta ctgttggcgc
      121 gctattttta cgccagccga ttggaagatg tcggccgtat ttcacatatc tttgtgccat
      181 ttatattgtt ggtaattcca gcctttttgg tatttcgcca acctgatctt gggacgacaa
      241 tcctgttggt taccactggc gtcgtcatgc tgtttttggc tggtgtccga gcgtgggtat
      301 ttgtggctgg cgccgtcgcg accattgcgg cggtggtccc gttgtggaag tttgttctat
      361 tggattacca gaagcagcgt ttcttaatgt ttattgatcc ggaaaaggat cctttggggg
      421 cgggctatca tattctccaa tccaagatcg ccctcggctc gggcggtatg tttggtagag
      481 gctttctcga aggctcgcaa agtcacttga gctttctacc ggaaaaacaa accgatttca
      541 tttttaccat gttggccgaa gagtttggcc tagtcggcgg catggccctc atcgggctct
      601 atttgttgct attgatctac gccttcgcca tttcgcttag atgccgcagc caattcggcc
      661 gcctcattgg gatgggggtg tcgacgtcat ttttcctcaa tatttttgtt aatattgcga
      721 tggtgatggg cgtcatcccg gtcgtcggta tgccgctgcc gctgatctcc tatggtggca
      781 ctgcgatgtt gtcgctgatg tttagctttg gcctgctact ctgcgtctat gttcaccgcg
      841 atgtccagat cggccctggc gccgctgatg ggaactagtt aaaatctttt aattataaat
      901 cgggcgatta gctcagttgg cagagcagct gactcttaat cagcgggtcg taggttcgaa
      961 tcctacatcg cccaccaatt aaatcaatga cttagcgggt aattgctgag ttatattttt
     1021 ttcggggtaa cgtcaggggt aacatttggc gcggttttgc atggatttgg cactcagtca
     1081 cgtctacccc cggggatgcc actgtatcgc gcttaatatc gcttgtagcg gtactttaaa
     1141 ggcgccgcgg cgcgggtaat ttctgatgcc atcggaatgg catcgtcgaa tggttaggca
     1201 actcagttct ttcctgtcga cgcctacgtt tcagtgccta attccgatac tgcctg
//
LOCUS       DASCNL010000542         1582 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001131129, whole genome shotgun sequence.
ACCESSION   DASCNL010000542 DASCNL010000000
VERSION     DASCNL010000542.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001131129"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1092)
                     /locus_tag="QF359_07250"
     CDS             complement(<1..1092)
                     /locus_tag="QF359_07250"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJO86740.1"
                     /translation="MTETDLPNGPLTGIRVIDLTRILAGPICTMNLGDMGAEIIKIER
                     PGKGDDTRDWGPPFVEGQAAYFLCANRSKKSVTLDLKNEQGKDILRQLIAKSDVVVDN
                     FKTGTMEKWGFTEEWFKDQAPHVVQCQITGYGDKGPKAGLPGYDFILQAESGLMSITG
                     NIDCGPAKYGVAIVDVCTGQNAAMCILAALNARHTTGKGQRIELSLFNTSLAMLVNIG
                     SSYLANGERPGRFGNAHASIVPYRDFSTKDGDIAIAVGNDTQFSRLAKTLGHAEWATN
                     KDFRTNAQRVENRVALELAINENLARKSADEWIKSFEADGIPCSKINAADEAIECAQA
                     QAHDMVVELDHPTIGSLRMLGVPYTFSEPP"
     gene            complement(1094..>1582)
                     /locus_tag="QF359_07255"
     CDS             complement(1094..>1582)
                     /locus_tag="QF359_07255"
                     /inference="COORDINATES: protein motif:HMM:NF021365.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2064 domain-containing protein"
                     /protein_id="HJO86741.1"
                     /translation="RPLSRDARWQSYLAITPDNDALAGFGWSSPELARLPQGRGNLGE
                     RLGRIHRDLAPGPVIFIGTDLPDIDTERMGRAFKALGDHDAVIGPAEDGGYWLIGFKR
                     RPRILDVFNNIRWSSEHTRSDTIRNIEAKVHHPRIKLLEQLDDIDDIASYQKAQKIYL
                     GN"
BASE COUNT          361 a          407 c          414 g          400 t
ORIGIN      
        1 cgggggctca gagaaagtat agggaacacc cagcatcctt aggctgccga tggtcggatg
       61 atcaagctct acgaccatat cgtgagcctg agcctgcgcg cattcgatgg cttcatcggc
      121 ggcattgatt ttgctgcacg ggatgccgtc tgcttcgaac gatttaatcc actcatcggc
      181 ggattttctg gccaagtttt cattgatggc aagttccagg gcaactctat tttcgacccg
      241 ttgggcgtta gttctgaaat ctttattcgt ggcccattcg gcgtggccta aagttttggc
      301 gaggcgggaa aattgggtat cgttaccaac agcaatagca atgtcgccgt ctttggtcga
      361 gaaatcccga taaggcacga tgctcgcatg ggcattgccg aagcgaccag gtcgttcacc
      421 gttagcgaga tagctcgagc caatattcac cagcatggcg aggctggtgt tgaacagtga
      481 aagttcgata cgttggcctt tgccggtggt atggcgggca ttgagtgcgg ccaggataca
      541 cattgcggca ttttgaccag tgcagacgtc aactatagca acgccatatt ttgccggacc
      601 gcaatcaata ttgccggtga tgctcatcag cccgctctcg gcctgcaaga taaaatcata
      661 accgggcaat ccggccttgg gtcccttatc tccatagcca gtgatctggc actggacgac
      721 atgaggcgcc tgatccttaa accattcttc agtgaaaccc catttttcca tcgtgccggt
      781 tttgaaattg tcgactacaa catctgattt tgcaatcagc tggcgcaata tgtcctttcc
      841 ctgctcattt ttcagatcaa gggtgacgct ttttttactg cgattggcac ataggaaata
      901 agcggcttgc ccctcaacaa agggagggcc ccaatcacgc gtatcatcac ctttgccagg
      961 ccgttcgatc ttgataatct cggcgcccat atcacctaaa ttcatggtgc agattgggcc
     1021 ggctaaaatg cgggttagat caatcacgcg gataccggta agcgggccat tgggtaaatc
     1081 tgtttcagtc atgttaattc ccgaggtata ttttttgggc tttctgataa ctcgcaatat
     1141 cgtcgatatc gtccaattgt tcgagcagtt ttatacgggg gtggtgaact ttggcttcaa
     1201 tgttgcggat ggtatctgac ctggtatgct cactcgacca tctaatattg ttaaaaacgt
     1261 cgagaatcct gggccgtctt ttaaaaccaa taagccaata gccgccgtct tcagctggac
     1321 cgatcacagc gtcatggtca cccagagctt tgaaagcgcg gcccatccgc tcggtgtcaa
     1381 tgtccggcag atcagtgccg ataaaaataa ccgggcctgg tgcaagatcg cggtggatac
     1441 ggcctaatcg ctcaccaagg ttgccgcggc cctgtggcag ccgagcgagt tcaggtgacg
     1501 accagccaaa acccgccagc gcatcattgt ccggcgtaat ggccaggtaa gattgccagc
     1561 gggcatcacg gcttagcggc cg
//
LOCUS       DASCNL010000543         1025 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001131642, whole genome shotgun sequence.
ACCESSION   DASCNL010000543 DASCNL010000000
VERSION     DASCNL010000543.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001131642"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="QF359_07260"
     CDS             <1..582
                     /locus_tag="QF359_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HJO86742.1"
                     /translation="VMATRAQYRDQFEKTHGVRLGFMSYFVKAAIVALKEFPAVNAEI
                     QGDEIVYKNYYDIGVAVGTPTGLVVPVLRDADQMSFADIEKSIKNFGNRARDGKLALE
                     EMTGGSFTITNGGIYGSMLSTPIINSPQSGILGMHNIVKRPWVVGDEIKVRPIMYLAH
                     SYDHRIIDGREAVSMLVRIKECIEDPQRIMLDM"
     gene            621..>1025
                     /locus_tag="QF359_07265"
     CDS             621..>1025
                     /locus_tag="QF359_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO86743.1"
                     /translation="MADTYDVTIIGAGPGGYVAAIRAAQLGLKVAIVEKCSTLGGTCL
                     NVGCIPSKALLHSSHLYEEATEGMAGHGVIASGVKLDLKAMMVHKDGVVGDTIKGVDF
                     LMKKNKIDRLHGTGSISGAGSVTITGNKGKADT"
BASE COUNT          265 a          231 c          278 g          251 t
ORIGIN      
        1 gtgatggcaa ctcgggcgca atatcgtgat cagttcgaaa aaacccatgg cgtcaggctt
       61 ggctttatga gttatttcgt caaagcagcg attgtcgcgc tcaaagagtt cccggctgtg
      121 aatgcggaaa ttcagggcga tgagattgtc tataaaaact attatgatat tggcgtggcc
      181 gtcggcacgc caacgggcct ggtggtgccg gtgttgcgcg atgccgatca gatgagcttt
      241 gccgatatcg aaaaaagcat caagaatttt ggtaaccgcg cccgtgacgg caaactggcc
      301 cttgaggaaa tgacgggtgg cagctttacc atcaccaatg gtggcatcta cggttcaatg
      361 ctgtcgacac cgatcatcaa ttcaccgcag tctggcattc ttggcatgca taatatcgtt
      421 aagcgtccgt gggtggtcgg cgatgaaatt aaagtgcgcc caatcatgta tttagctcat
      481 agctatgatc accggatcat cgatggccgc gaagcggttt cgatgctggt tcggatcaaa
      541 gaatgcattg aagacccgca gcgcattatg ctggatatgt aactacaaaa tttatttaag
      601 aaataaagag gacttagatc atggccgaca cttatgacgt taccattatc ggcgccggac
      661 cgggcggtta tgttgcggct attcgcgcgg cgcaattggg tttgaaggtg gcaattgttg
      721 aaaaatgctc aacccttggc ggcacctgtt tgaacgttgg ctgtataccg tcgaaagcat
      781 tattgcattc ctcccatctg tatgaagagg caaccgaagg aatggccggt cacggcgtaa
      841 tcgccagcgg cgtcaagctc gatcttaaag cgatgatggt ccataaagat ggcgttgtcg
      901 gcgataccat taaaggtgtc gattttttaa tgaaaaaaaa caaaatcgac cgcttgcacg
      961 gcaccggctc aatttctggc gctggatcgg tgaccatcac tggcaacaaa ggtaaggccg
     1021 acact
//
LOCUS       DASCNL010000544         1298 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001134364, whole genome shotgun sequence.
ACCESSION   DASCNL010000544 DASCNL010000000
VERSION     DASCNL010000544.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001134364"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1298
                     /gene="ligA"
                     /locus_tag="QF359_07270"
     CDS             <1..>1298
                     /gene="ligA"
                     /locus_tag="QF359_07270"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HJO86744.1"
                     /translation="AIEEAFPHLIRGDSPSQQVGVAPTSGFSKVTHARSMFSLGNVFS
                     AEDLADFLGGLRRFIKKLTDDKNIPLEMVAEPKIDGLSISLRYEKGKFVSAATRGDGS
                     VGEDVTANLKTFKELPFELKGNVPDVVEVRGEVYLSKSDFAELNRHQEDAGEKVFANP
                     RNAAAGSLRQLDETITATRPLKIFAYAWGELSEPIGDTQWAFFEQLKSWGFQVNELTQ
                     ICGDLAELMTVYDEISGKRAQLDYDIDGVVYKVNRLDWQERLGFVSRAPRWAVAHKFP
                     AEKAQTIINEIDIQVGRTGSLTPVAKLEPVTVGGVVVSNATLHNEDEIARKDIRVGDT
                     VVILRAGDVIPQVVEVILNKRPKGSKAFKYPTICPICGSDAVRDEGESVRRCTGGAIC
                     DAQVIERFKHFVSRGAFNIEGFGSKHVEAFFDEGLIKTLT"
BASE COUNT          319 a          294 c          364 g          321 t
ORIGIN      
        1 aggcaatcga agaagccttt ccccacttaa tccggggaga cagtccttca cagcaggttg
       61 gagtggcacc gaccagtggg ttttcgaagg tcactcacgc tcgctctatg ttttctttgg
      121 gtaatgtttt ctcagcagaa gatttggcgg attttctcgg tggtctccgg cgctttataa
      181 aaaaacttac cgatgataaa aatatcccac tggaaatggt tgccgaacct aaaatcgacg
      241 gcttgtcgat ctcgctgcgt tatgaaaagg gtaaattcgt ttcggcggcg acccggggcg
      301 acggatcggt cggagaagat gtcacggcca atctaaaaac atttaaggaa ttgccatttg
      361 aattgaaagg taacgtgccg gacgtagtag aagtccgggg tgaggtatat ctctcgaaat
      421 ccgattttgc cgaacttaac cgccaccagg aagatgcggg tgagaaagtt ttcgccaatc
      481 ctaggaacgc cgcagccgga tcacttcgtc agcttgatga gacgataact gcaacccggc
      541 cgctcaaaat atttgcctat gcctggggtg agttgagtga gccaattggc gatacccaat
      601 gggctttttt tgagcagctc aaatcatggg gttttcaagt gaatgaactg acgcaaattt
      661 gtggggacct tgccgagtta atgactgtct atgatgaaat atccgggaaa cgcgcacagc
      721 ttgattacga tatcgatggg gttgtctaca aagtaaaccg cctcgactgg caagagcggc
      781 tgggctttgt cagccgtgcc ccacgctggg cggtggccca taaattcccg gcggaaaaag
      841 cgcaaaccat catcaatgag attgatattc aagttggacg cactggttcg ctgaccccag
      901 ttgccaagct tgagccggtt acggttggcg gcgttgtggt ctccaatgcg acgctccaca
      961 atgaagacga gatcgcgcgt aaagatatcc gggtgggtga tacggtagtt atcctaaggg
     1021 ctggtgatgt aatcccgcag gtggttgagg tgattctcaa taagcggcct aaaggatcaa
     1081 aagcttttaa atatcccacc atatgcccaa tttgcggttc agacgctgtg cgcgatgaag
     1141 gtgagtctgt gcgccggtgc acgggtgggg cgatttgtga cgcccaggtg attgagcgct
     1201 tcaagcattt tgtttcccgc ggcgccttta atatcgaagg ctttggcagc aaacatgttg
     1261 aagcgttctt cgatgagggt ctgatcaaaa cgctgact
//
LOCUS       DASCNL010000545         2219 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001137330, whole genome shotgun sequence.
ACCESSION   DASCNL010000545 DASCNL010000000
VERSION     DASCNL010000545.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001137330"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="QF359_07275"
     CDS             <1..271
                     /locus_tag="QF359_07275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86745.1"
                     /translation="IVPFVFVYGPELLMIGSWHVITVSLVTAIIGLILIAAALESYFQ
                     DHLVLWERLLLGAVGFGLVVPSYYSTGVSVVIFVIYFVPRYVRQN"
     gene            379..1638
                     /locus_tag="QF359_07280"
     CDS             379..1638
                     /locus_tag="QF359_07280"
                     /inference="COORDINATES: protein motif:HMM:NF017722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HJO86746.1"
                     /translation="MPNLALPPHRIDVCLSEKREPGMMIFNVRPGGSADRIGDLGWIL
                     GLNQAGEFPLNFQFDVPSQDVRSLANGNLLFSQTSVGLIREVTWAGKPVRQWHVAGKY
                     QDHAPPIDSIEIEAELFHHTINIFPNGNLLLLSAEAREYEDWPVDDSDPNAARYTATV
                     VGDVVLEVSPEGKVLNRWPMLDLLDPYRLCYDSCSPYWQARGFTNSNDWCHANAVTFD
                     AADNSIMVSLRTQDCIIKFDHGSGELKWILGDPGNWQQPWSDKLLKPVGKLEWQYHQH
                     DCSVTPSGTILCFDNGNFRATPFAEKMTDQESYSRVVEFAVDEDAMTVEQVWAFGKDP
                     EERLFACYQGGAYRLPQTGNTFMTYGGICTIDGEATGDINNAFAQARLIEVTPKKEIV
                     FEMWIDGSGESEPLPLSSFRAEFVADL"
     gene            1720..>2219
                     /locus_tag="QF359_07285"
     CDS             1720..>2219
                     /locus_tag="QF359_07285"
                     /inference="COORDINATES: protein motif:HMM:NF025587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HJO86747.1"
                     /translation="MSNKIEIVRTQELPVLDIGSFLAGDETALDSLAAKLQTACERYG
                     FFFLENHSVSSVLIKNMFAENKRFHNQSMEIKNTIAVDDNQRGYIRPKATLVKHSTYN
                     KNTKFDSNETTVFATDYGKDNPFRQAKKRFYGENQWPENLPGFKEVIQEYMTAMTKLG
                     KSILPI"
BASE COUNT          558 a          502 c          540 g          619 t
ORIGIN      
        1 tatcgtacca tttgtttttg tctatggccc cgagctcctg atgatcggct cctggcacgt
       61 gattaccgtt tctctcgtta ctgcaattat tggtctaatt ttaatcgccg ctgctcttga
      121 atcttacttc caagatcacc tggtattgtg ggaacgctta ttactcggtg ctgtcggatt
      181 tggcttggtg gtgccaagtt attattccac aggcgtatcg gtagttattt tcgtgattta
      241 ttttgtgccg cgttatgtcc ggcaaaatta aaagtttgat ttgaaactgc aataagttat
      301 cgctaagctg ccagacattc catagattgg gtgctgctct tcgatgaaat attttagcat
      361 tatctactgt cgtgtttagt gcctaattta gccttgccac cccatcgcat cgatgtctgc
      421 ctgtccgaaa aacgtgagcc gggcatgatg atatttaatg tccggcctgg tggctccgcg
      481 gaccggatcg gagatttggg ctggatcctt ggcctcaatc aagcgggtga gtttccgcta
      541 aattttcagt tcgatgtgcc gtcgcaggat gtgcggtcgt tagcaaatgg caatctgctg
      601 ttttcccaaa ccagtgtcgg actgatacga gaagtgacgt gggcaggtaa gccggtgcgc
      661 caatggcatg tcgccggtaa atatcaagat catgcgccgc ccatagacag catcgaaata
      721 gaagccgagc tgtttcatca cacgattaat atttttccca atggcaacct cttgctgctt
      781 agtgccgagg cgcgggaata tgaggattgg ccggtagatg acagcgatcc taatgctgct
      841 cgctatactg ccactgttgt tggcgatgtt gtgcttgaag tctcgcccga aggcaaagtc
      901 ttaaaccgct ggccgatgct ggacttgctg gatccttacc ggctgtgtta cgacagttgc
      961 tcaccctatt ggcaagcccg cggttttacc aacagtaacg actggtgtca tgccaatgcg
     1021 gtgacctttg atgcggcgga taactcgatc atggtgtctc tgcgcactca ggattgtatc
     1081 atcaagtttg atcatggttc gggtgagctt aagtggatac tcggtgaccc cggcaattgg
     1141 caacagcctt ggtcggataa actacttaaa cctgtcggca agctcgagtg gcaatatcat
     1201 cagcatgatt gttcggtgac accaagtggc actattctat gttttgacaa tgggaacttc
     1261 cgggcaacgc cgtttgctga gaaaatgacg gaccaagaaa gctatagccg ggtagtggaa
     1321 tttgccgttg atgaagatgc catgaccgtc gagcaagttt gggcttttgg taaagaccca
     1381 gaggagcgct tatttgcgtg ttatcaaggc ggtgcctacc gattgccgca aaccggtaat
     1441 acctttatga cctatggagg catttgtacc atcgatggag aagcaacagg cgacattaac
     1501 aacgccttcg ctcaagcacg gttgatcgaa gttaccccga aaaaagaaat cgtttttgag
     1561 atgtggattg atggtagcgg tgaatctgaa ccgctgccgt tatcttcgtt tcgcgccgag
     1621 tttgttgctg atctttagcc ctttttcatt gcagtttatt agcaatgttc ctacaatttt
     1681 cggtgtatat ttcgtaccaa aaaaacggaa gcaggcgaaa tgtccaataa aattgaaatt
     1741 gttagaactc aagaattacc agttttagat atcggctctt ttttggccgg cgatgaaaca
     1801 gcactcgatt ccttagcggc taaattacaa accgcttgcg aacgttatgg atttttcttt
     1861 ctcgagaatc actctgtctc cagcgtcctc ataaaaaata tgttcgccga aaacaaacgt
     1921 tttcacaacc aatcgatgga gattaaaaat accatagccg tggatgataa tcagcgcggc
     1981 tatattcgcc caaaggcaac cctcgtcaag cattcgacct acaataaaaa caccaaattc
     2041 gacagcaatg agacgacggt tttcgctact gactatggta aagacaatcc tttcaggcaa
     2101 gcaaagaaac ggttttacgg tgaaaatcag tggccggaaa atctaccggg cttcaaagaa
     2161 gttatccaag aatatatgac ggccatgacc aagctgggca aaagcattct gccgatctg
//
LOCUS       DASCNL010000546         3946 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001138396, whole genome shotgun sequence.
ACCESSION   DASCNL010000546 DASCNL010000000
VERSION     DASCNL010000546.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3946)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3946)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3946
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001138396"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="QF359_07290"
     CDS             <1..520
                     /locus_tag="QF359_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010509290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HJO86748.1"
                     /translation="AGKSTFLAAVTRARPKIADYPFTTLHPNLGVGYVDGDEIVLADI
                     PGLIEGAHDGTGLGDRFLGHVERCDVLLHLIDGTEEDVAGAYKTVRHELAEYGADLNE
                     KLEVVALNKIDALTDDMIAEKSAELSAAAGQEVLTISGVAGMGVEQALRRLSEAVVDY
                     RAKEREAETVNE"
     gene            513..1637
                     /gene="proB"
                     /locus_tag="QF359_07295"
     CDS             513..1637
                     /gene="proB"
                     /locus_tag="QF359_07295"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HJO86749.1"
                     /translation="MNNNTSHLANAKRIVIKIGSVLLVDQETGRLHRRWLEGLATDVE
                     RCRARGQEIIIVSSGAIALGRRYLSLKSGDLHLEEKQAAAAVGMVRLTHAYQECFETH
                     NLSVAQILLTRDDSENRRRYLNARSTLMTLLDVGAVPLINENDSVATEEIRFGDNDRL
                     AARVAAMVSADVLVLLSDIDGLYDADPAANTKAKLIPEISEITPDIEKMAGAAASGDS
                     SGGMVTKLAAAKQCLGAGCRMVITEGKQINPLQALESGANCSWFLPRGTPQTARKQWI
                     AGTLQPMGTITIDNGAVEALKDGRSLLPAGVANISGEFQRGDAVAIETSDGHEIGRGL
                     SAYSSADAKLIMGHKTDDILELLGYRGRDEMVHRDDLVMN"
     gene            1649..2917
                     /locus_tag="QF359_07300"
     CDS             1649..2917
                     /locus_tag="QF359_07300"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HJO86750.1"
                     /translation="MSGNKNITEVMQKIGKAAKDAAQALVNAPTEAKNRVLTEAAMSL
                     RDNSEAIIQANYKDMAAGEQKGLTSAMLDRLELNEDRISGMAAGLEAIAELNDPVGSV
                     MENWDRPNGLSISRVRVPLGVIGVIYESRPNVTADAGSLCLKSGNASILRGGSESFHS
                     SSTILDSLKAGLRAANLPEAAIQMVPTTDRAAVGEMLIMTDTIDVIVPRGGRSLVERV
                     QTEAKVPVFAHLEGICHTYVNADSSPEMAKKIVVNAKMRRTGICGATETLLIDRDAVA
                     THLPPILDALNAAGCEIRGDDETRELDVRVIAASEEDWDTEYLDSIISVRQVDGVEEA
                     VNHVNRHGTEHTDAIVTYDAATAEIFLNGINSAIAVHNASTQFADGGEFGMGAEIGIS
                     TGKMHARGPVGVEQLTTFKYVVRGDGHVRP"
     gene            2944..3549
                     /locus_tag="QF359_07305"
     CDS             2944..3549
                     /locus_tag="QF359_07305"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HJO86751.1"
                     /translation="MTNIETFAGKRIGILGGSFNPAHRGHLHISRQALKLLQLDEIWW
                     MVSPQNPLKPVNDMVDFESRIESAETIAQDRRIRVTNIEFELDTAYTAETLTELKKKF
                     PKARFVWLMGADNLMQIPKWKDWQQIFRAVPIAIFTRPTYTKRALAGYAARRFARYRI
                     DETQAHSLSARQAPTWAFLNIKPDAISATRVRAGIGAVNMY"
     gene            3650..>3946
                     /gene="rsfS"
                     /locus_tag="QF359_07310"
     CDS             3650..>3946
                     /gene="rsfS"
                     /locus_tag="QF359_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HJO86752.1"
                     /translation="MKVAQASLDDDKAQDVIVINLTGKTSFADYMIVASGTSQRQVAT
                     MATHLREKLKAAGVNEVPLEGAQKNDWLLIDGGDIIVHLFRPEIREFYALEKIWG"
BASE COUNT          967 a         1001 c         1066 g          912 t
ORIGIN      
        1 tgcgggaaaa tcaacttttt tagcggcggt tacccgcgcc cggcctaaaa ttgctgacta
       61 tcctttcacc acactacatc ccaatttagg cgttggctat gtcgacggcg atgagattgt
      121 tctagccgac atccccgggc ttatcgaagg ggcacatgat ggcactggtc tgggcgatcg
      181 tttcttgggc catgtcgagc gctgcgatgt cttgctgcac ttaattgacg gcaccgaaga
      241 agatgttgcg ggtgcctaca aaactgttcg ccatgagctg gcggaatatg gcgctgatct
      301 aaatgaaaaa ttggaagtcg tcgcgctcaa caaaattgac gccttaaccg atgacatgat
      361 tgctgagaaa agcgctgaac tttcggctgc cgccggacag gaagttttga cgatctccgg
      421 tgttgccggc atgggtgtcg aacaggcact tcgccgcctt tctgaggctg ttgtagatta
      481 ccgcgctaag gaaagagaag cggagactgt taatgaataa caacacctca catttagcta
      541 atgccaaacg catcgtcatt aaaattggct cggttttatt ggtcgatcag gagaccggcc
      601 gtctccaccg gagatggctt gagggtttgg ccaccgacgt cgagcgctgc cgcgcgcgag
      661 gccaggagat aatcattgtc tcctccggtg ccattgcttt gggccgccgc tatctaagtt
      721 taaaatccgg cgatttacat ctcgaagaaa agcaagctgc tgctgccgta ggtatggtgc
      781 gcttgaccca cgcctatcag gaatgttttg aaactcataa tctgtcggta gcgcagattt
      841 tactgacccg cgatgacagc gaaaaccggc ggcgctatct taatgcccgc tcgacgctaa
      901 tgacattgtt ggatgttggc gcggtacctt tgatcaacga aaatgacagc gttgccaccg
      961 aagaaattcg tttcggcgat aatgatcgct tggccgcccg ggtggctgcc atggtatctg
     1021 ccgatgtctt ggttttgtta tcggacatcg atggtctgta tgatgccgat cctgccgcca
     1081 ataccaaggc caagctgatc ccggaaattt cggaaatcac acctgatatt gaaaaaatgg
     1141 ccggtgccgc tgcatcaggt gacagttccg gcggcatggt tacgaaactc gcggcggcta
     1201 aacaatgttt gggtgcaggc tgccgcatgg tgatcaccga gggtaagcaa attaatccgc
     1261 tgcaggcgct cgaaagcggt gccaattgct cctggttcct gccccgcggc actcctcaaa
     1321 ccgctcgcaa acagtggatt gctggcacgt tgcaacccat gggcacgatt accattgata
     1381 acggtgcggt tgaagcactg aaagatgggc gtagcttgct gcctgctggt gtcgccaata
     1441 ttagtggtga gtttcaacgc ggcgatgcgg tggcgatcga aacctcagac ggccacgaaa
     1501 tcggccgcgg cttaagcgcc tattcttcgg ctgatgcaaa actcattatg ggtcataaaa
     1561 ccgatgatat tttagaactt ctgggttacc gtggccggga cgaaatggtc catcgagatg
     1621 atctggtgat gaattaagga ttggtgcgat gtcgggcaac aaaaatatta ctgaagtgat
     1681 gcaaaaaatc ggcaaggccg ccaaggacgc cgcacaggcg ctagttaacg cgccgactga
     1741 agctaagaac cgtgtcttaa cagaagccgc gatgtctttg cgagataatt ctgaagccat
     1801 tatccaggct aattacaaag atatggcggc gggtgagcaa aaaggcctaa cctcggcaat
     1861 gctcgaccgg ttggagctga acgaagaccg tatttctggc atggccgccg gcttggaagc
     1921 tatcgccgaa ctcaatgatc cggtaggcag tgtaatggaa aactgggacc gccccaatgg
     1981 tctatccatc tctcgcgtgc gggtgcctct gggtgttatc ggcgtaattt atgaatcgcg
     2041 gcccaatgta acagccgatg ccggcagctt gtgcttaaaa tccggcaatg catcaatttt
     2101 acgaggtggc tcagaaagct ttcattcttc ctcgaccatc ctggatagcc tgaaagcggg
     2161 tctccgggcg gccaatttac cggaggccgc cattcaaatg gtccccacca cagaccgggc
     2221 agccgtcggc gagatgctga tcatgaccga taccatagat gtaattgtgc ctcgtggtgg
     2281 ccggtctttg gtcgaacgcg tacaaaccga agccaaggtg cccgtctttg cccatctcga
     2341 aggcatttgt catacctatg tgaacgctga ttctagcccg gaaatggcca agaaaattgt
     2401 cgtcaacgcc aagatgcgcc gcaccggaat ttgtggcgcg acggaaaccc tgttgatcga
     2461 ccgcgatgcc gtagccaccc atctgccgcc tattttggat gcgctgaatg cggcaggctg
     2521 tgaaattcgc ggcgatgatg aaacccgtga actcgacgtc cgggtaatcg cggcgtcgga
     2581 agaagattgg gataccgaat atctcgattc cattatctcg gtacgccaag tcgatggcgt
     2641 cgaggaagcg gtgaatcacg tcaaccgcca tggcaccgaa cataccgacg ccattgtcac
     2701 ctatgacgca gcaacggctg agatattcct caatggcatc aatagcgcca tcgccgtcca
     2761 taatgcctcg acacaattcg ccgatggtgg cgaatttggc atgggtgctg aaatcggtat
     2821 ttccaccggt aaaatgcatg cccgcgggcc ggttggagtt gagcagctca cgacatttaa
     2881 atatgtcgtc cgcggcgatg gccatgtacg gccgtaattg tttctgagtt gggaaacagc
     2941 cctttgacta atatcgaaac attcgccggc aagcgcattg gcattttggg tggatctttt
     3001 aatccggcgc atcgcggcca tctgcatatc agccgccagg cgctgaaact cctgcagctc
     3061 gatgaaatat ggtggatggt gtcaccgcag aacccgttga agccagttaa cgatatggtc
     3121 gattttgaaa gccggattga atctgctgaa acgattgccc aggatcgccg cattcgggtc
     3181 actaatattg aatttgagct cgacacggcc tatacagcgg aaaccttgac cgaattaaag
     3241 aaaaagttcc caaaggcccg gtttgtctgg cttatgggtg cggacaacct catgcaaata
     3301 ccaaaatgga aggactggca gcaaattttt cgcgccgtcc ccattgcgat ttttacccga
     3361 cctacctaca ctaaacgggc gttagcggga tatgcagcgc gccggtttgc gcgatatcgc
     3421 atagatgaga ctcaggccca cagcttaagt gcacggcaag cacccacctg ggcttttctc
     3481 aatatcaaac cggatgccat ttccgcgacg cgggttcgtg ccggcatcgg tgcggttaat
     3541 atgtactaat tgattaattg agacagcaaa ggagacgcac accattcctc gtaaagctaa
     3601 ggcgccccgc aaagcaaaag ggccttctaa cgtaacatcg aaaaaacttt tgaaagttgc
     3661 tcaggcgtcc ctcgatgacg ataaggctca agatgtcatc gttatcaatc tcaccggtaa
     3721 aaccagtttt gctgattaca tgatcgtcgc atcaggcacc tctcaaagac aggttgcaac
     3781 catggccaca catctccggg agaaattaaa ggcagcagga gtgaacgaag ttccgcttga
     3841 aggcgcccag aaaaatgatt ggctgctgat tgacggtggc gatatcattg tccatttgtt
     3901 tcgccccgaa atccgtgaat tttatgctct ggagaaaata tggggt
//
LOCUS       DASCNL010000547         1518 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001140393, whole genome shotgun sequence.
ACCESSION   DASCNL010000547 DASCNL010000000
VERSION     DASCNL010000547.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001140393"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="QF359_07315"
     CDS             complement(<1..338)
                     /locus_tag="QF359_07315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014752959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HJO86753.1"
                     /translation="MHPTDIPQEVKDHIILRRGKLHLYEDLDPAKSALIVIDMQNTFM
                     EPGAMAEVPMAREIVSNINRLAAACRQAGAAVAWVQVTVSPEDGDDYWPGLLAHVNTK
                     ERAALFLEALA"
     gene            complement(348..1139)
                     /locus_tag="QF359_07320"
     CDS             complement(348..1139)
                     /locus_tag="QF359_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HJO86754.1"
                     /translation="MSETETVTACCLIIGNEVLSGRTKDANLGWLAERLTDLGIRMAE
                     ARVIPDDEEVIINTVNEVREKYTYVFTTGGIGPTHDDITSLCVAKAFGVEVHRNPEAK
                     ALLEAYIPAKRLNEARLKMADVPVGSMLIRNPVSKAPGFQMGNVYVMAGVPSIMRTMF
                     DELASTLTGGTKMESIAVASYLLEGAVAAPLGDIQDAHPKVEIGSYPFFRAGHFGCTL
                     ISRGTDMTELETVAEEVRQMIISLGGEPIDEDLITPADADNSKDY"
     gene            complement(1204..>1518)
                     /locus_tag="QF359_07325"
     CDS             complement(1204..>1518)
                     /locus_tag="QF359_07325"
                     /inference="COORDINATES: protein motif:HMM:NF024811.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HJO86755.1"
                     /translation="VYIQPILEHFELGHWFERVYGSELDGTRAVKTDLLHHIFAELDL
                     IPAETVMIGDRMHDIDAAKAVGATSIWVDYGHGSAKERDRAEPDYICASIEELGVLLN
                     SI"
BASE COUNT          348 a          422 c          397 g          351 t
ORIGIN      
        1 gcgagcgcct caagaaacag tgcagcccgc tccttggtat tgacgtgagc gagcaagccc
       61 ggccaatagt cgtctccgtc ttcgggagat accgtgactt gcacccaggc aacggcagcg
      121 cctgcttgcc gacaggccgc ggccaagcga ttaatgttgg acacaatttc gcgggccata
      181 ggcacttcag ccatggcacc cggttccata aaagtgtttt gcatgtcgat tacaatcagt
      241 gccgatttgg ctgggtccaa atcttcatag agatggagtt taccgcggcg gagaataata
      301 tggtctttaa cttcctgcgg tatatcagtt ggatgcatgc gatctcccta atagtctttg
      361 gaattgtcag cgtcggctgg cgtgatgagg tcttcatcga tcggctcacc gccgaggctg
      421 atgatcatct ggcggacttc ttcggcgact gtctcaagtt cagtcatatc ggtgccacgc
      481 gaaatcagcg tgcagccgaa atggccagcc cggaaaaacg gatagctgcc gatttcgacc
      541 tttgggtgag catcttggat gtcgccaagg ggtgccgcga cggccccttc cagcaggtag
      601 gaagccactg cgatcgattc cattttggta ccccccgtga gggtcgatgc caattcgtca
      661 aacatcgtcc gcatgatcga cggcacgcct gccatgacat agacattgcc catctgaaaa
      721 ccaggcgctt tgctgaccgg attgcggatc agcatcgagc ccactggcac atccgccatc
      781 ttaagccggg cttcgttcaa ccgtttggca ggaatataag cctccaacag cgctttagct
      841 tccggattgc ggtggacttc aacgccaaac gctttggcca cacagagcga cgttatgtca
      901 tcatgggtcg gcccgatgcc accggtggta aagacatagg tgtatttctc gcgcacttcg
      961 ttgacggtgt tgatgatgac ttcttcatcg tccggaataa cccgagcctc ggccatgcga
     1021 atgcccaaat cggtcagccg ttcagccagc cagccgagat ttgcatcttt ggtgcggccc
     1081 gagagaactt cgttgccgat aatcaggcaa cacgccgtga cggtttcggt ttcagacata
     1141 agtaccctgt aagtctttat tttcggtcga tagaaatggc ggaaatatca ccgaaaggca
     1201 agtctagatc gaatttaaca ggacaccgag ttcttcgatg gaggcgcaga tataatcggg
     1261 ctcggctcgg tcacgctcct tcgctgaacc gtgaccataa tcaacccaaa ttgacgtcgc
     1321 gccgacggct ttggccgcat ctatatcatg catcctatca ccgatcatca cggtttccgc
     1381 cggaatgaga tcaagctctg caaaaatgtg atgcaacaaa tccgttttga ccgcccgcgt
     1441 gccatccagc tccgaaccat atacccgctc aaaccaatgg cccagttcga agtgttcaag
     1501 gattggctgg atatagac
//
LOCUS       DASCNL010000548         3671 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001141284, whole genome shotgun sequence.
ACCESSION   DASCNL010000548 DASCNL010000000
VERSION     DASCNL010000548.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3671)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3671)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3671
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001141284"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /gene="surE"
                     /locus_tag="QF359_07330"
     CDS             <1..759
                     /gene="surE"
                     /locus_tag="QF359_07330"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HJO86756.1"
                     /translation="ILISNDDGIDAPGLKKLEAIAKKLCKEVWVIAPEVEQSATGHSL
                     TLHSPLRIKNVSKNHYSVNGTPTDCVMMAMNNLMRDCRPDLVLAGINRGSNVGEDMTY
                     SGTIAVAMEATLFGIPAIALSQDIDEDYVKTRINWSSAEAYTAKIIKKVTSVAWSHDV
                     LINVNFPHVPKTKVTGIEITREGRRKIGDEIIESSDPRGEPYYWIGAQQNSARYPAGT
                     DLAAIQNGAVSVTPISLDLTHRATMRTLKEAFKK"
     gene            784..1440
                     /locus_tag="QF359_07335"
     CDS             784..1440
                     /locus_tag="QF359_07335"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HJO86757.1"
                     /translation="MNYDISLSEKLKMELVLALRRAGITDPDVVATMESVPREVFVPD
                     AFQNKSYQDITLPIGHHQTLSQPAVVGLMTEALELDDRKKVLEIGTGSGYQTAILSPL
                     CRRVYSIERHAPLLEEAEKRFEKLRIRNVTTKVGDGTLGWDAQAPFERIIVTAAAADV
                     PPILAEQLSLGGIMIVPIGLSDDFRTILKVIKTDHGLETEELRDVQFVPLIPEEATGT
                     "
     gene            1477..2580
                     /locus_tag="QF359_07340"
     CDS             1477..2580
                     /locus_tag="QF359_07340"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HJO86758.1"
                     /translation="MEKNFRNFVGFGVVLILSGCGNLQWPPPSQQSGSQRVAPAMSVP
                     STPVSQRAEIPASGIIQVKNGDTLFIISRRYGVSARAIIEANDLMPPYRLQRGESLIL
                     PRPRVHQIVRGDSLYKISRHYGFDAYELARLNYLRPPYRIYVGQQLVLPSSGASGMPE
                     ETVVAKREPVKTETLPSVRQSAEPVPEIPIPSRKPAVKAPHQQPKVTTTPRKTIPVPR
                     VKTSGRFNWPVRGRLLSIYGSKGEGLHNDGINIAAPHGASVRAAGSGVVAYAGNELRG
                     FGNLLLIKHAGGWVTAYAHNDRLLVRRGDKVGIGQVVAKVGASGNVASPQLHFEIRKG
                     KRAINPLRHLKRLRAQIKSVPGTLFALLTNRYI"
     gene            complement(2617..3474)
                     /locus_tag="QF359_07345"
     CDS             complement(2617..3474)
                     /locus_tag="QF359_07345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJO86759.1"
                     /translation="MSKHELDPLLERIADALDRLAPPAGKSHDLSAADAFVWHSYPEN
                     LEPIHKVNRIALDLLRGIDQQISILRDNTERFANGYPANNALLWGARGTGKSSLVKAI
                     HAEINENNKNQLALVEIHREDTPTLPRLLHVLAKSDRRCLLFCDDLSFEMEDATFKSL
                     KAVLEGGIEGRPENIIFYATSNRRHLMPRDMIENERSTAIHTAEAVEEKVSLSDRFGL
                     WLGFHPVKQDTFFDIIDGYAKRYGLKMNQEQLHAEALEWSMTRGSRSGRVAWQFIQDL
                     AGRLGKHID"
BASE COUNT          929 a          880 c          970 g          892 t
ORIGIN      
        1 atcttaatat ccaatgatga tggcattgat gcgccgggtc ttaaaaagct tgaggcaata
       61 gccaaaaaac tttgcaaaga ggtttgggtt atcgcgcctg aagttgagca aagtgcgacc
      121 gggcattcgc taacactgca ctcgccgctc aggatcaaga atgttagtaa aaatcactac
      181 agcgtcaacg gcacgccgac cgattgcgtg atgatggcaa tgaacaatct gatgcgcgat
      241 tgccgccctg acttggtgct ggcgggcatt aatcgtggtt ctaatgtcgg cgaggatatg
      301 acttattccg gcaccatagc ggtggcgatg gaggcgacgc tgtttggtat tccggcaatt
      361 gcccttagcc aggatattga tgaagattac gtaaaaacta ggataaattg gtcgtcggct
      421 gaggcttata cggcaaaaat catcaaaaaa gtcacttctg tcgcctggtc gcatgatgtt
      481 ttaataaatg ttaactttcc ccatgtaccc aagaccaagg taactggcat cgaaatcacc
      541 cgggaggggc gccgcaagat cggcgatgag attatcgaaa gtagtgatcc gagaggtgag
      601 ccgtattatt ggattggcgc gcagcaaaat tctgcacgct atcctgctgg tacggatttg
      661 gcggcgatcc agaatggcgc agtttcggtg accccgattt cgctcgatct aacccaccgg
      721 gcaacgatgc gcactttgaa ggaggctttt aagaaataaa agcctgacaa agggaaaaag
      781 gtaatgaatt acgatattag tctttctgag aaattaaaga tggagctagt gctagcactt
      841 cgtcgtgctg gcataaccga tccggatgtg gtcgcaacca tggaaagcgt gccgcgggag
      901 gtgtttgtgc cggacgcctt tcaaaataaa tcttaccaag atatcaccct gccgattggg
      961 caccaccaga cgctcagcca gccagctgtg gttggcttga tgacagaagc acttgaattg
     1021 gatgaccgga aaaaggtact cgaaatcggc accggttccg gctatcagac ggcaatttta
     1081 tcgccattat gccgccgtgt ttattcgata gaacgtcatg cgccattgtt ggaggaggcg
     1141 gaaaaaagat ttgaaaagct ccgcattcgt aatgtcacga ccaaagttgg cgatggcact
     1201 ctcggctggg atgcgcaggc tccgtttgaa cgcattatcg tgacggcagc agcagctgac
     1261 gtgccgccta ttttagcgga gcagctttcg ctcggtggta ttatgatcgt gccgattggg
     1321 ctgagcgatg attttcgaac cattttgaaa gtgatcaaaa ctgatcacgg tctcgaaacc
     1381 gaagagttac gtgatgttca atttgtgccc ttaataccgg aagaagcgac cggaacataa
     1441 aactttgata tcccaaagta cctgtgggca atgtctatgg aaaagaactt taggaatttt
     1501 gttggttttg gcgtagtcct gattttatca ggttgcggca atctgcaatg gccaccgccc
     1561 agtcaacaat ccggtagtca acgggtcgca ccagcaatgt cagttccgtc caccccggta
     1621 tctcagcgtg ccgaaattcc agccagcggc atcatccaag ttaaaaacgg agatacgctg
     1681 tttattattt cccggcgcta tggcgtttct gcgcgggcca ttatcgaagc caatgatctg
     1741 atgccaccct atcgtttgca gcggggcgaa tcgctcatcc taccgcgtcc ccgggttcac
     1801 caaattgttc gcggtgactc actctataaa atatcccggc actatggttt tgatgcttat
     1861 gagttggcgc ggctgaacta tctgcgcccg ccctatcgaa tttatgttgg gcaacagcta
     1921 gtgttgccgt catccggggc atcgggtatg ccggaagaaa ctgttgtggc taaacgcgag
     1981 ccggttaaaa cggagactct accatcggta agacaaagtg cagagccggt gccagaaatt
     2041 cccattccct cccgcaaacc agcggtgaaa gcgccacacc agcagcctaa ggtaacgacg
     2101 acgccaagaa aaacgatccc cgtacctcgc gtcaaaactt ctggccggtt taattggccg
     2161 gtgcggggcc gactattgtc gatttacggc tcaaaaggtg aaggactgca taatgatggc
     2221 atcaacattg ccgcccccca tggtgcgtca gtgcgtgcgg ccggcagcgg cgtcgtggct
     2281 tacgccggca acgagcttcg tggttttggc aatttattgc tgatcaaaca tgccggcggc
     2341 tgggtcacgg cttatgctca taatgaccgg ttgttggtga ggcgtggtga taaggttggt
     2401 ataggtcagg tggtggctaa agtgggcgcg tcgggtaatg ttgcctcacc gcaactgcat
     2461 tttgaaattc gcaaaggcaa acgcgccatc aatccgctta ggcatctcaa gcggctgaga
     2521 gcacagataa aaagtgtacc aggtacactt tttgcactgc taactaatag atatatctag
     2581 ataattgaaa tattaaaagt gtacctggta tactttttag tcgatgtgct tgccgaggcg
     2641 accggcgaga tcctgaataa actgccaagc aacccgaccg gagcgtgagc cccgggtcat
     2701 tgaccattcg agggcctcgg cgtggagttg ctcctggttc atttttaagc cgtagcgttt
     2761 cgcatagccg tcaatgatgt caaagaaagt atcctgtttg accgggtgga agccaagcca
     2821 aagaccaaaa cgatccgaca gcgagacttt ttcttcgacg gcctctgcgg tgtggatggc
     2881 ggttgagcgc tcgttctcaa tcatatcccg cggcataagg tgacgacgat tggatgtcgc
     2941 ataaaaaatt atattctccg gccggccttc aatgccgcct tcaagcacgg ctttcagtga
     3001 tttgaatgtc gcgtcttcca tctcgaaaga gagatcatca cagaacagca gacagcgccg
     3061 gtctgattta gccaggacat gcagcagtcg aggcagagtt ggagtatctt cccggtgaat
     3121 ttcaaccaat gccagctggt tcttattatt ttcattgatt tcagcgtgga tggctttaac
     3181 cagcgagctt ttgccggtgc cgcgggctcc ccacagcaac gcgttattag cgggatagcc
     3241 attggcgaag cgctcggtat tatcacgtaa aatactaatt tgctggtcaa tcccccgcag
     3301 cagatcaagc gctattcggt tgactttatg gatcggctca aggttttcag gataagaatg
     3361 ccagacgaag gcatccgcag cggacaggtc atggctttta ccagcaggcg gcgccaaacg
     3421 gtccagcgcg tcggcgatgc gttccaaaag agggtcaagc tcgtgttttg acattcaagt
     3481 attctccgaa atcaccttat tcgttaggcg gcgggaccct accatacgta tacgattggt
     3541 caataatttc acatgtatat ttgatattga gaaaattcgc gccaatgcac cctggaccag
     3601 agatgtcaca aagaaatatg cgacgcaata atttgccatg ccatttcatc caggtgcagc
     3661 taaatattac a
//
LOCUS       DASCNL010000549         1521 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001144104, whole genome shotgun sequence.
ACCESSION   DASCNL010000549 DASCNL010000000
VERSION     DASCNL010000549.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001144104"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..499)
                     /locus_tag="QF359_07350"
     CDS             complement(<1..499)
                     /locus_tag="QF359_07350"
                     /inference="COORDINATES: protein motif:HMM:NF013918.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HJO86760.1"
                     /translation="MAVKKSRKIFKPLVFIASLIPLGWLVFLLYSDTTLGTKYMTADP
                     VQKLDRELGDWALIFIILSLAVRPLAEILKKSELVAYRRMIGFFAFFYVCLHLSAYIG
                     LNLQLDLDEFIEDVTKRNFITIGIINVILLAPLVITSTKGMIKRLGNKRWQKLHMLIY
                     PIALLG"
     gene            complement(506..1498)
                     /gene="msrP"
                     /locus_tag="QF359_07355"
     CDS             complement(506..1498)
                     /gene="msrP"
                     /locus_tag="QF359_07355"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HJO86761.1"
                     /translation="MLIKWKKTSDVKPSEITPKDVFLNRRKFIQAAAIASGASLVPNF
                     VNSSLATTAPGYDGKKFSNVNKSAFGKAEKLTTYEGLTTHNNFYEFGTGKSDPFRNAR
                     TLEPSPWSVEITGHAAKTGTFSVEDIIKPHQLEERIYRLRCVEAWSMVIPWVGVPLAD
                     VIKRFEPNSKAKYVAFETLVDPKQMPGQERNALPWPYVEGLRMDEAMNPLTILAVGVY
                     GVHMPKQNGAPVRLVVPWKYGFKYIKSIVKISFVEKEPPATWNIQAPSEYGFYSNVNP
                     NVDHPRWSQKKERRITGEGGLSALLTPKIETKFMNGYAEEVAHLYKGMDLNKFF"
BASE COUNT          390 a          378 c          363 g          390 t
ORIGIN      
        1 cgcccaatag cgcgatcgga taaatcagca tgtgtaactt ctgccaacgc ttgttgccaa
       61 ggcgtttgat catgcctttg gtcgaggtaa tcaccagcgg cgccaacaat ataacgttga
      121 taataccgat ggtgataaaa ttgcgtttgg tcacatcttc gatgaactcg tccaaatcca
      181 attgcaaatt taaaccgata taggcgctga gatgaaggca aacataaaag aaagcaaaaa
      241 agccgatcat ccgccggtac gctaccagct cacttttttt tagaatttcc gccaacggcc
      301 ggacagcaag cgacaggatg ataaaaatca gcgcccaatc accaagctcc cggtcgagct
      361 tttgcaccgg atcggcggtc atatatttgg tgccaagcgt ggtgtctgaa tagagcaaga
      421 aaaccagcca gccaagcggg atcaggctcg ctataaaaac cagtggctta aatatttttc
      481 gggatttttt aaccgccata tcacctcaaa agaacttgtt gaggtccata cctttataaa
      541 gatgcgccac ttcttcggca tagccgttca taaacttggt ttcgatcttg ggcgttaaca
      601 gcgcgctcag gccaccttca ccagtgatgc ggcgttcttt cttttggctc cagcgtgggt
      661 gatcaacatt ggggtttaca tttgagtaaa agccatactc actaggcgcc tggatgttcc
      721 aggtggccgg tggttccttt tcaacaaagc tgattttgac aatcgactta atatacttga
      781 agccatattt ccacggcacg acgaggcgga ccggtgcgcc attttgtttg ggcatgtgta
      841 caccatagac gccaaccgcc aaaatcgtca gcgggttcat ggcctcatcc atccgcaatc
      901 cttcgacata aggccacggc agtgcattgc gctcctgacc gggcatttgt ttaggatcaa
      961 ccagggtctc aaaagcgaca tacttggctt tcgagtttgg ctcgaagcgt ttgatgacat
     1021 cagccagcgg aacaccgacc caggggataa ccatcgacca ggcttctaca cagcgcagcc
     1081 gataaatacg ctcctccaac tggtgcggtt tgataatatc ttcaacacta aacgtgccgg
     1141 ttttggcggc atgaccggta atttcgaccg accagggtga tggctctagt gtccgggcat
     1201 tgcgaaaggg atcagatttt ccggtgccga attcgtagaa attattgtgg gtcgtcagcc
     1261 cttcataggt cgtgagtttt tcggctttgc cgaacgccga tttattgacg ttggaaaatt
     1321 ttttgccatc atagccaggc gccgtggtgg ccagactaga attaacgaaa tttggcacga
     1381 gcgaagcgcc actggcaatc gccgccgctt gaataaattt gcgccggttt aaaaaaacgt
     1441 ctttgggcgt aatttccgac ggtttaacgt ccgacgtttt tttccattta atcaacatat
     1501 taaattctcc atggcaccat g
//
LOCUS       DASCNL010000550         1085 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001144144, whole genome shotgun sequence.
ACCESSION   DASCNL010000550 DASCNL010000000
VERSION     DASCNL010000550.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1085)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1085)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001144144"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="QF359_07360"
     CDS             <1..414
                     /locus_tag="QF359_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO86762.1"
                     /translation="MAKAHQFLTFTTPPNLQKAVAYGLNKDKEYFGSLGIDMQAKRDR
                     LSDGLANIGFEVMASEGTYFLTTDFRPLGFNGDDTKFCKHLTTEAGVAAVPFSPFYQA
                     GAESGVTHFARFCFCKQSDLLDAAIERLGKHFGGV"
     gene            693..>1085
                     /locus_tag="QF359_07365"
     CDS             693..>1085
                     /locus_tag="QF359_07365"
                     /inference="COORDINATES: protein motif:HMM:NF014659.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HJO86763.1"
                     /translation="MPLPAVAMKLKNWAGLLTLFLILSGMLPGQPVKAADKYQQGQLL
                     VANPKMVDPRFVRTVIFVCRHDSTGAFGLVLNRPVDNLSVQKFLDSIGIDLTKIKGSF
                     QIRIGGPVELQSAYLMHNEEFGKDKHICK"
BASE COUNT          268 a          269 c          263 g          285 t
ORIGIN      
        1 atggctaaag cgcatcagtt cctgactttt acgacaccgc ccaatctgca aaaagccgtc
       61 gcctatgggc ttaataaaga taaagaatat ttcggatcgc tgggcatcga tatgcaggcc
      121 aagcgcgacc ggctcagtga tgggctcgcc aatatcggct tcgaggtgat ggcgagtgaa
      181 ggcacgtatt ttctaactac cgatttccgg cctttgggct ttaacggtga cgacaccaag
      241 ttctgcaaac atttaaccac tgaggctggg gtggccgctg tgccgttcag cccattttat
      301 caagccggtg cggagagcgg cgtcacccac tttgcccgct tctgtttctg taaacaaagt
      361 gatctcctcg acgccgcgat cgagcggctc ggcaagcatt tcggcggggt ttaagaatta
      421 agggggacac gtaacagtac atgttccctt aattatatgt cgcttcatct ttaagagatt
      481 agaacccagg gttcaacacc gcaccatccg tcaccccgga cttgatccgg ggtccagtct
      541 tcctttggcg caagtataga acgaggcttt ctggattctg gctttcgcca gaatgacgat
      601 aagttttttt gcgactatat tcccacaaaa ttatcctgat ttagtctata cttgctccga
      661 tggatttata tctagggagg cagcaccagt ttatgccgct gccagctgta gcgatgaaat
      721 taaagaactg ggccggcctg cttacacttt ttctgatatt gtccggcatg cttccgggac
      781 agccggtaaa ggcggcggat aaataccaac agggtcaatt actcgttgct aatcccaaaa
      841 tggttgatcc ccgtttcgtc cggacagtaa tttttgtgtg ccgtcatgac agcactggcg
      901 ccttcggact ggtccttaat cggccagttg ataatttatc agtgcaaaag tttctcgatt
      961 ccatcggcat tgatttaacc aagataaaag gcagcttcca aatccgaatt ggcgggccgg
     1021 tcgaactgca atcagcctat ctcatgcaca acgaagaatt tggtaaggat aaacacattt
     1081 gcaaa
//
LOCUS       DASCNL010000551         1554 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001147810, whole genome shotgun sequence.
ACCESSION   DASCNL010000551 DASCNL010000000
VERSION     DASCNL010000551.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001147810"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="QF359_07370"
     CDS             complement(<1..201)
                     /locus_tag="QF359_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86764.1"
                     /translation="MNGYYCGHHPNPNIFGMEPRRVNYGCSDAATAENPIFHPALFAL
                     FAAAVMYWFTRQAVRQRFTVTLS"
     gene            complement(235..1404)
                     /locus_tag="QF359_07375"
     CDS             complement(235..1404)
                     /locus_tag="QF359_07375"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJO86765.1"
                     /translation="MPTYDIDRFPVIVQFEDNSSVTETYGFVGSQGYVFLESQLILPR
                     DVKSDTIFLFMHPATTLNLMPFPAGLAAAGCHVMCCGSRYAKNDTALIMEKVVIDLGA
                     YVRHAKEELGYKNVVLMGWSGGGSLTLYYQSQALNPTITHTPAGDPLNLTAAELISAD
                     LVVFIAAHIGRAKILSEWIDPSVLDENNHDNRDAWLDIYNPENSNQPPYDPVWVEKFR
                     TAQRARIHRITARVEETLADLKEKDGLELERPFITHRTMADPRHFDLTLEPNGRKANW
                     CYLGDPETVNVGPVGIGRFSTLRAWMSQWSEKSNADGILCAANIETPLLLVENQADDA
                     TPPSHTQQIFQASASPDKTMHVIDGATHYYKDQPKKLAEAVGHVITWVRDKGLIE"
BASE COUNT          400 a          374 c          378 g          402 t
ORIGIN      
        1 tgataacgta actgtaaagc gttgcctgac cgcttgccgg gtaaaccaat acattacggc
       61 tgctgcaaaa agggcaaaaa gggcggggtg gaaaatagga ttttccgcag tcgccgcatc
      121 gctgcagccg taattcaccc tccttggttc catcccaaaa atgttgggat tcggatgatg
      181 gccgcagtag taaccgttca ctagaattct tactcatatt ctttaactcc aaaattactc
      241 aattaacccc ttgtcgcgca cccaggttat tacgtgacca actgcctctg ccaatttttt
      301 gggctggtcc ttgtaatagt gagtggcgcc atcaatgacg tgcatggttt tatctgggct
      361 ggcagaagct tgaaaaattt gttgcgtatg gctgggtggt gttgcgtcat ccgcctggtt
      421 ctctaccaag agcaaaggtg tctcgatgtt ggctgcacat agaataccat cagcgtttga
      481 tttctcggac cattgagaca tccaggcccg gagtgtgctg aagcgtccga ttccgaccgg
      541 tccgacattg acggtttctg gatctccaag ataacaccaa ttcgccttgc ggccattagg
      601 ctccaaagtc aagtcaaaat gacgcggatc ggccattgtc cgatgggtga taaacgggcg
      661 ttccaattcc aaaccgtctt tttccttgag gtctgcgagg gtttcttcga cacgtgcggt
      721 tatcctgtga atgcgcgccc tttgtgccgt tctaaatttc tcaacccaga ccggatcata
      781 aggcggttgg tttgaatttt caggattata gatgtctagc caagcatccc ggttgtcatg
      841 attattttca tccaataccg aagggtcaat ccattcagag aggattttgg cccggccgat
      901 gtgagccgca atgaagacca ccaaatcggc ggagatcaat tcagcggcgg tcaaattcaa
      961 gggatcacca gccggggtat gggtaattgt tggattaaga gcctgtgatt ggtaatataa
     1021 agtcaatgac ccgccaccac tccagcccat caaaacgaca tttttatagc cgagttcttc
     1081 tttggcatgg cgaacataag cgccgagatc gatgacaact ttttccatga taagtgcggt
     1141 gtcatttttg gcatagcggc taccgcagca catcacatga cagccagccg ccgccaatcc
     1201 cgcaggaaaa ggcatcaagt tcaaggttgt tgccggatgc ataaacagaa agatcgtgtc
     1261 tgacttaaca tcgcgcggca gaatcagttg actttctaaa aaaacgtagc cctggctgcc
     1321 gacaaatcca tacgtctcgg taacggagga attatcttca aattgaacaa ttaccggaaa
     1381 acgatctatg tcatatgttg gcattaatag ctcctattgg tgggtctgtt ggagagacgg
     1441 aaaactatcc tagcaaatcg tcataacctg accgcgaaac caagcttgac agggatcccg
     1501 gtcaagccgt tcgtgccaga ccatgtccag tagaattttg gtaatttcaa atgg
//
LOCUS       DASCNL010000552         1661 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001147930, whole genome shotgun sequence.
ACCESSION   DASCNL010000552 DASCNL010000000
VERSION     DASCNL010000552.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001147930"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..143)
                     /locus_tag="QF359_07380"
     CDS             complement(<1..143)
                     /locus_tag="QF359_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HJO86766.1"
                     /translation="MAANSRRNQHRTDIWPGFVDALASLLMVIIFLLMIFVIAQFFLG
                     EALT"
     gene            complement(155..1291)
                     /locus_tag="QF359_07385"
     CDS             complement(155..1291)
                     /locus_tag="QF359_07385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HJO86767.1"
                     /translation="MTSPQRFVIRMVLFVLAVALVCLFLFLPLQKAFAANVGLNSLIV
                     SVLVLGILYNFRQVLMLYPEVAWIERYRKSSGAVSSVKPPKLLSPMATMLGERKDSLS
                     LSTLSMRSLLDGIASRLDESRDLSRYTIGLLIFLGLLGTFWGLLETVDSIKSVIDNLS
                     ISGGDFTTVFSNLKSGLAAPLSGMGTAFSSSLFGLAGSLVLGFLDLQASQSQNRFYND
                     LEEWLSSLTRLSSGALTTEGDQSVPVYVQALLEQTAESLENLQRTLARGAESNIQSNN
                     NLTRLTESLSTLGDQMRAEQNLLVKLTESQSDLRATLERLATANVGSGGMDEATQTHI
                     RNIDVYMARLLEELASGRDDVAHQLRSEIKLLARTIAATKENKG"
     gene            complement(1362..>1661)
                     /locus_tag="QF359_07390"
     CDS             complement(1362..>1661)
                     /locus_tag="QF359_07390"
                     /inference="COORDINATES: protein motif:HMM:NF012894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HJO86768.1"
                     /translation="QLIFTQGATKLSPAAQKSLDALATKLNALPQSRMQLLAYAGEGN
                     LSASKARRLSLSRALSARSYLIIKGVRSTRIDVRALGNKVPSGVPNRVDLKIIGK"
BASE COUNT          434 a          402 c          434 g          391 t
ORIGIN      
        1 gtaagagctt cccctaagaa aaactgagca atcacaaaaa tcatcaacag aaagatgatg
       61 accattaaca aggacgctag cgcgtcgaca aagcccggcc aaatatctgt gcggtgttgg
      121 ttgcggcggg agttcgcggc catcgccgtt tatcctatcc tttgttttct ttggtagccg
      181 ctatagtgcg ggccagcagt ttaatctcac tacgtagctg gtgggcgacg tcatcgcggc
      241 cagaagctaa ttcttcgagc aggcgcgcca tatagacatc aatattgcgg atatgggttt
      301 gggttgcctc atccatgcca ccactgccaa cattcgcagt ggctagccgt tccaaggttg
      361 cgcgcagatc agactgactt tcggtaagct tgaccagcag gttttgctcg gcccgcattt
      421 gatcaccgag cgtcgataaa ctttcagtga ggcgcgttag attattattg ctttgaatat
      481 tgctctcggc gccgcgggcg agggtccgtt gtaaattttc gaggctttcc gcggtttgct
      541 ccaaaagcgc ttgaacataa accggtaccg attgatcgcc ctctgtggtc aaggcgcccg
      601 atgacaggcg ggtcaaactc gacaaccatt cttccagatc attatagaac cggttttgcg
      661 actgactggc ttgtaaatct aaaaatccca acaccaaaga gcctgcgaga ccgaacaaag
      721 atgaagaaaa ggcagtgccc atgccggaaa gcggggccgc taatccagat tttaaattac
      781 tgaataccgt agtaaagtcg ccgccgctga tcgagagatt gtcgatcacg cttttgatag
      841 agtcgacggt ttcgagcaat ccccagaatg tgccaagcag acctaagaat attagcaggc
      901 cgatggtgta acgcgacaaa tcccgtgact catcgaggcg tgaggcaatg ccatccaata
      961 atgagcgcat cgacaatgtc gacaggctga ggctgtcttt acgttcgccc agcatggtcg
     1021 ccatgggaga caataattta ggtggcttga ctgaagaaac ggcgccggag gatttacgat
     1081 aacgctcgat ccaggcaact tctggataga gcattaggac ttgccgaaaa ttatagagga
     1141 ttcccaatac cagcacactg acaatcaagc tattgagccc gacatttgcc gcaaaggctt
     1201 tttgcagcgg caggaacagg aaaaggcaga ctaaggctac ggccagcacg aacaatacca
     1261 tgcggatgac aaaacgttgg ggtgatgtca tgattgagcc ccggctaaat gtctaaattg
     1321 gatttgttga gaggcctgca gggtaaagta ctcctaacca attatttccc aataatctta
     1381 aggtcgacgc gattgggcac gcccgatggg actttattgc cgagggcgcg tacatcaatg
     1441 cgggtgctgc gcacaccttt tataattaaa tatgagcgcg ctgataaagc tcgcgacagc
     1501 gacagccgcc gtgctttgct tgccgaaaga ttaccttctc cggcataggc caacaattgc
     1561 atccgggatt gcggtagagc gttaagtttt gttgccaggg catctaagga tttttgtgct
     1621 gccggactaa gcttggttgc accttgggta aaaattaact g
//
LOCUS       DASCNL010000553         1101 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001149687, whole genome shotgun sequence.
ACCESSION   DASCNL010000553 DASCNL010000000
VERSION     DASCNL010000553.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001149687"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            182..787
                     /gene="pth"
                     /locus_tag="QF359_07395"
     CDS             182..787
                     /gene="pth"
                     /locus_tag="QF359_07395"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014743826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HJO86769.1"
                     /translation="MYLLVGLGNPGSDYAGNRHNIGFMAVDDIHRHYSFAPYRTKFQG
                     EVADGTVAQEKVLILKPATFMNESGRSVAEATQFYKIKPENVIVLHDELDLAPGKIRA
                     KKGGGLAGHNGLKSIAAHIGQEFHRVRIGIGHPGDKDRVTGHVLKDFSKADQDWVEPL
                     LDAMTVSIDKLIAGDDSGFATKVALIFNPPKDQEENKENNE"
     gene            787..>1101
                     /locus_tag="QF359_07400"
     CDS             787..>1101
                     /locus_tag="QF359_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HJO86770.1"
                     /translation="MGFNCGIVGLPNVGKSTLFNALTETIAAEAANYPFCTIEPNTGR
                     VSVPDSRLDEIGEIAKSAQIVPTYIEFVDIAGLVKGASQGEGLGNQFLANIKETDAIL
                     HVL"
BASE COUNT          302 a          253 c          298 g          248 t
ORIGIN      
        1 agatgaagaa ggtctcgagg gcgaagaagg tctcgagggc gaagaaggtg tagaaggcga
       61 agaaggtgct gaaggcgcaa aaggtgaaga aaccaatggc gacgccaagg acgaaggtaa
      121 agactagcat ctccgtatcg tatcgaggtg cgactgttga aaaaaatacg ggagagttct
      181 catgtacctt ctggttggac tcggtaatcc cggctcagac tatgcaggta atcgtcacaa
      241 tataggtttc atggcggtgg atgatatcca tcgccattat tcctttgcac cctatcgcac
      301 gaaatttcag ggcgaagtgg ccgatggcac agttgcgcaa gaaaaagtcc tgattctaaa
      361 accagctact tttatgaatg aatctggccg ctcggtcgct gaagccacac agttttataa
      421 aatcaagccc gaaaacgtca ttgtcttgca tgatgaactt gacctggcac ccggtaaaat
      481 ccgcgccaaa aaaggcggcg ggctggccgg tcacaatgga ctcaaaagta ttgctgccca
      541 tattggccag gaatttcatc gggtgcgcat cggcatcggt catccgggcg ataaagatcg
      601 tgtcaccggt catgtcttaa aagatttctc caaggctgat caagattggg tcgagccgtt
      661 attggatgcg atgacggtga gtatcgataa gttgatcgcc ggagatgatt ccggctttgc
      721 caccaaggtt gcgctcatat tcaatccgcc taaagaccaa gaagaaaata aggaaaataa
      781 cgagtaatgg gattcaattg cggtattgtc ggtctgccga atgtcggcaa atctactctc
      841 tttaatgcct taacggaaac catcgcggct gaggctgcga actatccgtt ctgcaccatc
      901 gagcccaata ccggccgggt cagcgtgccc gacagccgct tggatgaaat cggcgaaatc
      961 gccaaatccg cccagatcgt gccgacctat atcgaatttg tcgatattgc tgggctggtt
     1021 aaaggcgcca gccaaggtga agggctcggc aatcagtttt tggcaaatat taaggaaacc
     1081 gatgcgatcc tccatgtgct g
//
LOCUS       DASCNL010000554         4833 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001152234, whole genome shotgun sequence.
ACCESSION   DASCNL010000554 DASCNL010000000
VERSION     DASCNL010000554.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4833)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4833)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4833
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001152234"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1103
                     /locus_tag="QF359_07405"
     CDS             <1..1103
                     /locus_tag="QF359_07405"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO86771.1"
                     /translation="VFIMDSEWSKKHGVEHALSPRNPKKVYSDSAMNGTGPFRLKSRK
                     PDVKTEYVRNGNWWGWNSFPGNLGAIVIRPIGNAATRVATLLAGDLDLLTEIPVQDIK
                     QVKSDKRFTVKSTAHIRTIFLSFNTRAEELATSNVQGKNPFRDIKVRQAVNVAINSDL
                     IKKKIMRNLSIPTATLVPPGLAGYSDKLAKRAETNSDLARKLLTSAGYPNGFSVRLDC
                     PNNRYFNDEAICQAVVSMLARIGIKISLNALPKDQWAPLVIRKKSDFYLAGFGTPTND
                     SLFMASHIFRGGPFHGGYKNAKINQLLKSAAGEMNMSKRAGMLASVFEIAKNESAIAP
                     IHYQVINWAVAKNVQINVDPNNIPDFRYIVVR"
     gene            1164..2132
                     /locus_tag="QF359_07410"
     CDS             1164..2132
                     /locus_tag="QF359_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO86772.1"
                     /translation="MISKIIGRLTQTVFVLVATSFISFAIFSFSPDPADSILGENATI
                     EDRENLRKELGYDRPFVVQFLDFIGRFGQGDFGKSLRTNERVSDLLIDRAPATLELVL
                     VSTVVTMIVGILLGIYTGTHRHSRISQFILSFSLLGVSVPTFLLGLLAVFLFAVHLDW
                     LPASSRAGVVDLGFWSTGLLTLEGWRSLLLPSLVHSVFNIGLFIRLVRADVLEIRTSD
                     YITFARARGLSEKVINYSHVLPNSLTPIINIGALNIGGLIAFSLITETVFQWPGLGLM
                     FVQAIQFSDFPIMSVYFVLIAFTFVFLNLLADILVGVVDPRIRRSG"
     gene            2144..3046
                     /locus_tag="QF359_07415"
     CDS             2144..3046
                     /locus_tag="QF359_07415"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO86773.1"
                     /translation="MRNYLKSDFVFELVRAPNALFGLFLLLSIFTIAILAPLVAPQNP
                     FDPLQLDLLNSRLPPAWIEEGNEQFLLGTDEQGRDVLSALFYGARLSLLVSLASVVFS
                     FTLGVCLGLFAGYFGGWTDKIISRLADLQLTIPGLLVAMMLVGVIKTQIPPEIQETAM
                     IYVVILAIGFSDWPKYTRVTRSATQVEAHEDYVLAARTMGAPVWLILWRHVLPNVLRS
                     NIVVATVGLGIAVMMEATLSFLGAGVSATTPSLGTLIRSGANSLFSGEWWTVIFPGIM
                     LLLTVFSINTLGDWVRDYLNPKLN"
     gene            3051..4700
                     /locus_tag="QF359_07420"
     CDS             3051..4700
                     /locus_tag="QF359_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO86774.1"
                     /translation="MLDIEDLQINFDTRRGQVKAVQGISLRVERGEILGLVGESGAGK
                     STVGSAVMGLLDIGGRVTSGRILFEGENLLVKSSEAMRKMRGRRIGMIFQDPMTALNP
                     VLSIADQMIGTIRLAFGLNRSEALEQAVKWLDRMSLPDPATRIHHYPHEFSGGQRQRI
                     VIALALCGKPDLVIADEPTTALDVSVQAQILDLIRSLVRENNIGVILITHNMGVVSEV
                     TDNIAIMRHGKLVETGPTRNVLMAPETAYAKMLIGSVPPSDKRLNRLPVPDSQGNLVH
                     STVEDPRPFDGRDMILQCDRLSVTYYAGGKLFTKGTPIRAVKDTSFGIPKGHSLGLVG
                     ESGSGKSTCARAIVGLNPLSGGSVRYREHILSNMSERKRRPLRSAIQMIFQDPYSSIN
                     KRMKIFDIIAEPIRFYGFADSKSAVLNRVTTLIERVGLSYDALQRYPHQFSGGQRQRI
                     AIARTLACQPKMIVCDEPTSALDVSVQAQILNLIKDLQDEFGLTLLFISHDLPVVRQM
                     CDEIAVLKDGQIVEMAPAGEIFESPRHEYTKHLINLMPRIY"
BASE COUNT         1119 a         1198 c         1247 g         1269 t
ORIGIN      
        1 cggtatttat catggattca gaatggtcca agaagcatgg agtggaacat gccctcagtc
       61 cgagaaatcc caaaaaagtt tattccgatt cagccatgaa cggcactgga ccgtttcggc
      121 tgaaaagcag aaagcccgac gtcaagacag agtatgtccg gaatggcaat tggtgggggt
      181 ggaactcctt tcccggtaat cttggcgcca tcgttattcg tccaattgga aatgcggcaa
      241 cccgcgttgc tactttgttg gcaggcgacc ttgatctatt aacggaaata ccggttcagg
      301 atatcaagca ggtaaaatcc gataagcgat ttacggtaaa atctaccgcc catataagga
      361 caattttctt gtccttcaac accagagccg aagaattggc taccagcaac gtgcaaggta
      421 aaaatccgtt tcgcgatatc aaggtgcgcc aagccgtgaa cgtcgctata aattctgatc
      481 tgataaaaaa gaaaataatg cggaatttat ccattccgac agcaaccctg gttcctcctg
      541 ggcttgccgg ctactccgac aaacttgcca aacgagccga aaccaattct gatttagcgc
      601 gcaaactact gacgtccgca ggctatccga atggattctc agtgcgacta gactgcccga
      661 ataaccgcta tttcaatgat gaagcgattt gccaggcagt ggtatccatg ttggctcgca
      721 tcggcattaa aatatccctg aatgcgctac ctaaagatca atgggcgccg ctggtgataa
      781 ggaaaaaatc tgacttctac ctagcgggat tcggcacacc gacaaatgac agcttgttca
      841 tggcgtcgca tatttttcgc ggtggaccat ttcacggcgg ctacaagaac gccaaaatca
      901 atcaactatt gaaaagcgcc gccggagaaa tgaatatgtc caaacgtgcc ggtatgcttg
      961 cctcggtgtt tgaaatagca aagaacgagt cagcaatcgc gccaattcac tatcaagtaa
     1021 tcaattgggc ggtcgctaag aatgttcaga ttaacgtgga tccaaataac atccccgatt
     1081 tccgttatat tgttgtccgc tagatcgatt ggctttacgc tttaatatcg cctggtgatt
     1141 tcaagggtaa aaccacaagt actatgataa gcaaaataat cggacgcttg acgcaaacgg
     1201 tgtttgtcct tgtcgcgaca agttttattt ccttcgcgat attcagtttt tcaccggatc
     1261 ccgcagattc catccttggt gaaaacgcca ccatcgaaga tcgcgagaat ctgcgcaaag
     1321 agctcggcta cgatcggccg tttgtcgttc agttcctgga ttttatcggt cgttttggac
     1381 agggcgactt cggcaaatct cttcgcacca atgaaagggt cagcgacctc ttgattgacc
     1441 gggcgccggc gaccctcgaa ttggtgttgg tgtccaccgt ggtgacgatg attgttggta
     1501 ttctgttggg tatctacacc ggcacccaca ggcatagccg gatatctcag tttatccttt
     1561 cttttagcct gctgggggtt tcggtgccga cttttctact gggtttattg gcggtttttc
     1621 tcttcgccgt acatctggat tggttgccgg cttcgagtcg cgctggtgtg gtggatttgg
     1681 gattttggag cactgggcta ttgaccctcg aagggtggcg atctcttttg ttgccgtcgc
     1741 tggtccactc tgtattcaat atcggattgt tcattcgtct ggtcagggcc gatgttctgg
     1801 aaattcgtac gtccgattat atcaccttcg ccagagcccg ggggttgtcc gaaaaagtta
     1861 taaattatag ccatgtctta cccaattctt taacgcccat catcaatatc ggggccctaa
     1921 atatcggtgg cttgatcgcc ttttcgttga ttacggagac cgtatttcaa tggccgggac
     1981 tcggcttaat gtttgtgcaa gctattcaat tcagtgattt cccgatcatg tcggtttact
     2041 ttgtattaat cgccttcact ttcgttttcc tcaaccttct ggcggatata ttagtcggcg
     2101 ttgtcgatcc ccgcattcgg cgcagcggtt aggcggggca attatgcgga actatttgaa
     2161 aagcgatttt gtgttcgaat tggtgcgagc gcccaacgcc ctattcggtt tattcttgct
     2221 gttgtcaatt ttcactattg ccattttggc gcctcttgtg gcgcctcaaa atcccttcga
     2281 tccgctacaa cttgatctgc tcaattcacg tttgccgccc gcctggattg aagaaggtaa
     2341 cgagcagttc ctcctcggca ccgacgaaca gggccgtgat gtgctctccg cattgttcta
     2401 tggcgcgcgc ctttccctgt tggttagtct ggcttctgtt gttttttcct tcacactcgg
     2461 tgtgtgtctg ggattgttcg ccggctattt tggtggttgg accgacaaaa ttatttcccg
     2521 cttggcggat ttgcagctca ccataccggg tctgctggtc gccatgatgc tggtcggtgt
     2581 aatcaaaacg caaattccac cggagattca ggaaaccgca atgatctatg tggtgatttt
     2641 ggccattggt ttttccgatt ggccaaaata cacgcgggtc acccgttctg cgacccaggt
     2701 cgaagcccat gaggactacg tattggcggc acgcaccatg ggcgccccgg tgtggctaat
     2761 actgtggcgc catgttctgc ctaacgttct ccggtcgaat atcgttgtcg ctaccgtggg
     2821 attggggatc gccgtcatga tggaagcaac tttgagtttt ttgggcgctg gcgtctcggc
     2881 cacgacgccc tcgttgggaa ctttaatccg gagcggcgcc aactcgctat tctcgggaga
     2941 atggtggacc gtcatcttcc ccgggatcat gcttctgctg acggtatttt ccatcaacac
     3001 tttgggcgac tgggttcgag actatctgaa tccgaaactg aactaacgcc atgctggata
     3061 tcgaagatct gcaaatcaat ttcgacacgc gccggggcca ggtgaaggct gtgcaaggca
     3121 ttagcttgcg tgtggagcgt ggcgaaattc tcggcttagt gggagaatcc ggcgccggga
     3181 aatcaaccgt cggctcagcg gtcatgggtc tgctggacat cggcgggcgg gttaccagtg
     3241 ggcgtatctt gttcgagggt gaaaatcttt tggtgaagtc ttctgaagcg atgcgtaaaa
     3301 tgagagggcg gcgcatcggg atgatttttc aggatccgat gacggctttg aaccctgtgc
     3361 tttccattgc cgatcaaatg atcggaacaa ttcgtctggc cttcggtctc aaccggtcgg
     3421 aggccctgga gcaggccgtt aaatggctcg accgtatgag tctgccggat ccggcgacgc
     3481 ggatccacca ttatccccat gaattttcgg gtggccagag gcagcgtatc gtcattgcct
     3541 tggcgctgtg cggcaaaccc gatctggtta ttgccgacga accgacgacg gcgttggatg
     3601 tatcagtcca ggcgcaaatt ttagacctca tccgcagtct ggtccgggaa aataatatcg
     3661 gtgttatcct gatcacacat aatatgggcg tggtctccga agtaactgac aatatcgcca
     3721 tcatgcgcca cggcaagctg gttgaaaccg gcccgacccg taatgttctg atggcgccag
     3781 aaaccgccta cgccaagatg ctgatcggtt ctgtaccgcc tagcgacaaa agactgaata
     3841 gattgccggt gccagatagc cagggcaatc ttgttcactc gacagtcgag gatcctcgac
     3901 cattcgatgg tcgggatatg atactacaat gtgatcggtt gagtgtgacc tactacgccg
     3961 gtggcaaact gtttaccaaa ggcacgccaa ttcgagccgt caaggatacc tctttcggca
     4021 tacccaaggg acattcgctt gggttggttg gtgagtcagg gtcggggaaa tccacctgcg
     4081 cgcgcgcgat cgtcggccta aacccgttat cgggcggcag cgtcagatat cgcgagcata
     4141 ttctgtcgaa tatgagtgaa cgaaaacgcc gcccgttgcg cagcgccata cagatgattt
     4201 ttcaagaccc ttattcatca attaacaaac gaatgaaaat tttcgacatc atcgccgagc
     4261 cgatccgttt ttacggcttt gccgacagca aatcagccgt gttgaatcgc gttacgactt
     4321 tgatcgaacg agttgggctc tcatatgacg ccttgcaacg atacccacac cagttttccg
     4381 gtggccaacg tcaacggatt gctatcgccc gaactttggc atgtcagccg aaaatgatcg
     4441 tctgcgatga gccgacatcg gcgcttgatg tttcggtgca ggcgcaaatc ctcaacctga
     4501 tcaaagacct gcaggacgaa tttgggctaa cgcttctttt tataagccac gatttaccgg
     4561 ttgttcgtca gatgtgtgat gaaatcgccg tcctgaaaga cggacagatc gtagaaatgg
     4621 ccccagccgg cgagatattt gagtcacccc gacacgaata taccaaacac cttatcaacc
     4681 tgatgccccg tatatattga aggaatgtaa aaaaatgttg agtgcgtatt cagagagtta
     4741 cagccaagct aggcaaatgt ttctggccgt atgtgaaaac cggaaactgg aatatttttc
     4801 agtgataaat ccaaacctag ggccggacgg gga
//
LOCUS       DASCNL010000555         1618 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001153177, whole genome shotgun sequence.
ACCESSION   DASCNL010000555 DASCNL010000000
VERSION     DASCNL010000555.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001153177"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..740
                     /locus_tag="QF359_07425"
     CDS             <1..740
                     /locus_tag="QF359_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO86775.1"
                     /translation="NPLAEVFAPLIIGMAGDYTHILASATTFGKNLLPRVAALMDVQQ
                     ISEITAIQDADIFERPIYAGNAIATVQSNDATKLITVRATAFEAAVAGDNAADITAVD
                     ASENPRLSEFVNTELTKSDRPELTAARVIISGGRGMQGGEHFAMLEKVADILGAAVGA
                     SRAAVDSGFVSNDYQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKVIVAINKDEEA
                     PIFQVADYGLVGDLFKAVPELEVELEK"
     gene            787..>1618
                     /locus_tag="QF359_07430"
     CDS             787..>1618
                     /locus_tag="QF359_07430"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HJO86776.1"
                     /translation="MSNKIKNIGVIGAGQMGIGIAHVCAASNYDVKLVDIDDAAVARA
                     TGEIDKNLSRLVSRGKISDADKKAAMAKISTDTTFDSLGDCDLVIEAATENEEIKKTI
                     YAQVCPILKEDAILSTNTSSISITRLAAQTDRPGRFMGIHFMNPAPLMELIELINGIA
                     TEPETFETIRKFTSNLGKTPVSAEDFPAFIVNRILLPMINEAVYTLYEGVGSVDAIDT
                     AMKLGAHHPMGPLELADFIGLDTCLSVMQVLHDGLADTKYRPCPLLVKYVEAGWLGRK
                     S"
BASE COUNT          424 a          375 c          400 g          419 t
ORIGIN      
        1 ccaatccgct ggcggaagta tttgcgcctt taatcattgg catggccggt gactacacgc
       61 atattctggc atcggcaacg acgttcggta aaaacttatt gccaagggta gctgccttaa
      121 tggatgtcca gcagatatct gaaattaccg ccattcaaga tgctgacatc tttgagcgac
      181 cgatctatgc tggtaacgcc atcgccacgg ttcagtcgaa cgacgccacg aagcttataa
      241 ctgtccgagc aacggcgttt gaagctgctg ttgctggcga taatgccgcc gatattacgg
      301 ctgttgatgc ctctgaaaac cccagacttt ctgaatttgt caacaccgag ctaaccaagt
      361 cggatcgtcc tgaattgacg gcagcgcggg tcattatctc cggcggccgg ggcatgcagg
      421 gtggcgaaca ttttgccatg ctggaaaaag tcgctgatat cctgggtgct gcagttggcg
      481 cctcccgggc ggcggttgat tctggcttcg tctctaacga ctatcaagtt ggccagaccg
      541 gcaaaattgt tgccccggag ctatatatcg cggttggtat ttccggtgcc attcagcact
      601 tggctggcat gaaagatagt aaagtcattg tcgctattaa caaagatgaa gaagccccta
      661 ttttccaggt tgcggattat ggtctagttg gagacctttt taaagcagtc cctgaactgg
      721 aagttgaact cgaaaaataa gagaataaat aaaattaaca atattgataa ggataagtgg
      781 tcaaatatga gcaacaaaat aaagaatatc ggtgttattg gcgcaggcca aatgggtatt
      841 ggtattgctc atgtctgtgc cgcctccaac tatgatgtaa aactcgttga tattgatgac
      901 gctgctgtgg caagagcgac tggtgaaatt gataaaaatt taagccgttt agtctcgcgt
      961 ggcaaaatat ctgatgccga taaaaaggcg gcgatggcta aaatttcaac cgacacaact
     1021 tttgattcgt taggtgattg cgatctggtt atcgaagcgg caaccgagaa tgaagaaata
     1081 aaaaaaacaa tctacgctca agtttgtccc attttaaagg aagacgctat cctatcgacc
     1141 aacacgtctt ccatttcaat cacacgatta gccgcccaaa ctgaccggcc gggccgcttt
     1201 atgggtatcc actttatgaa cccggcgccg ttgatggaat tgattgaact tattaacggc
     1261 atcgccaccg aacctgaaac ctttgaaacg attcgcaaat ttacgtctaa tcttggaaaa
     1321 accccggtca gtgccgaaga tttcccggcc tttatcgtaa atcggatatt gctgccgatg
     1381 ataaatgagg cggtttatac cctctatgaa ggcgtcggct cggttgatgc gattgataca
     1441 gcgatgaagc ttggtgctca ccatcccatg ggccccttgg aactcgctga ttttatcggc
     1501 ttggacacct gtctatcggt gatgcaagtg ctccatgacg gcttggccga taccaagtat
     1561 cgcccctgtc cgctgctggt taaatatgtc gaggccggtt ggctcggccg taaatcaa
//
LOCUS       DASCNL010000556         1889 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001153855, whole genome shotgun sequence.
ACCESSION   DASCNL010000556 DASCNL010000000
VERSION     DASCNL010000556.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001153855"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /gene="obgE"
                     /locus_tag="QF359_07435"
                     /gene_synonym="cgtA"
                     /gene_synonym="obg"
                     /gene_synonym="yhbZ"
     CDS             complement(<1..503)
                     /gene="obgE"
                     /locus_tag="QF359_07435"
                     /gene_synonym="cgtA"
                     /gene_synonym="obg"
                     /gene_synonym="yhbZ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388995.1"
                     /note="ObgE; essential GTPase; exhibits high exchange rate
                     for GTP/GDP; associates with 50S ribosomal subunit;
                     involved in regulation of chromosomal replication; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HJO86777.1"
                     /translation="MKFLDQQKIFVKSGDGGAGCVGFRREKYVEFGGPDGGDGGRGGN
                     VIAECVANLNTLIDFRYQQHFKARRGDHGQGCNKNGKASDDIILKVPVGTQIFDENQD
                     DMIADLTEPGEKVILAKGGDGGFGNAYFKSATNQAPRRADDGWPGEEKWLWLQLKLIA
                     DAGLIGLP"
     gene            complement(615..872)
                     /gene="rpmA"
                     /locus_tag="QF359_07440"
     CDS             complement(615..872)
                     /gene="rpmA"
                     /locus_tag="QF359_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HJO86778.1"
                     /translation="MAHKKAGGSSRNGRDSAGRRLGVKKYGGEAVVAGNIIIRQRGTK
                     WHPGKNVGIGKDHTIFALTEGKVKFWKTSAGKTFVGVDPLS"
     gene            complement(1182..1490)
                     /gene="rplU"
                     /locus_tag="QF359_07445"
                     /pseudo
     CDS             complement(1182..1490)
                     /gene="rplU"
                     /locus_tag="QF359_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
BASE COUNT          437 a          475 c          420 g          557 t
ORIGIN      
        1 ggcagaccga ttaagccggc atcagcgatc agtttcagtt gcagccacag ccatttttct
       61 tcaccgggcc aaccatcatc ggcacggcgc ggcgcctgat tggtggctga tttaaaatac
      121 gcattaccga agccgccgtc accgcctttg gcgaggatta ctttctcacc tggttcggtg
      181 agatcagcaa tcatgtcgtc ctggttttcg tcgaagattt gggtgccgac aggtactttt
      241 aggataatat catctgaagc tttaccgttt ttattgcagc cttgaccgtg atcgccacga
      301 cgcgctttga aatgctgctg gtatcggaaa tcgattaacg tgttgagatt ggcaacgcat
      361 tcggcaatga cattaccgcc gcgtccgcca tcgccgccgt cgggtccacc gaattcaaca
      421 tatttttcac gccgaaaccc gacgcaacca gcaccgccgt cgccgctttt aacgaaaatc
      481 ttttgttggt cgaggaactt cacaattttt ccttaaacct attgggttaa attagcctta
      541 ctttgagcta ggcactaaaa aaggggaatg gacagccatt ccccttataa aatttggatt
      601 ggctgtttta aatgttagga cagcgggtcc acaccaacaa aggttttgcc agcgctggtt
      661 ttccagaact tcactttacc ttcggtgagg gcaaaaattg tgtggtcttt accgatgcca
      721 acatttttgc cgggatgcca tttagtaccc cgttgacgaa tgatgatgtt gccagcaacc
      781 actgcttcgc caccgtattt tttgacgcca agacgacgac cggctgaatc acgtccattg
      841 cgggatgagc cgcctgcttt tttatgtgcc atgactaatt ctccttaatc gtcttttttc
      901 ttcgcggcag tttttttctt cggcgctgct ttttttttgg tcacggtagc tttcttcttc
      961 accgccgccg cttttttctt cgctggcgcc tttgctttga ccttaggttt ttcctcggtc
     1021 ttagtgtccg cttttggcgc agcatctttc ttcgctgacg ctttggcttt gaccttaggt
     1081 ttttcctcgg tcttagcttt agcggtaggc tttttctcgg ctttagtgtc cgcttttgga
     1141 gcagcgtctt tcttaacagc cgctttcact gcacctttac cattgatgtc cagcacccgc
     1201 aaaactgtct ggtcctgacg atgacctttg gtgcgtttgt aaccctggcg gcgctttttc
     1261 ttaaagacga taattttatc gctgcgcgac tgatcaacga cttcgcagtt aaccgcagtg
     1321 ctggtaagca ggggcgcacc caattccggg tctttaccat cttctccgac catcagcact
     1381 tggtccagtt taactttggt gccggcatcg cccaaaagct tctcaacaac gataatgtcg
     1441 cctggtgaaa ctcgatattg cttaccgcct gtctttacga ctgcgtacat tgttctcttt
     1501 ttcacttgag taatattacc gtacaaaaac agggcaccaa caaggagccc ctacggaagg
     1561 cgcggaaatt accggcctga gagcaaattg tcaatgggtt atagcagaaa ttggagagat
     1621 tactgacaaa attgatttag atcatatgtt ggggacaaaa ccatgttaga aaagttttaa
     1681 aataaccaaa aaacaagagg attttgctgt aatcagcaaa gtaagggggc taaatccgcg
     1741 ctatgccacg aactattttt gaactgccca acgatttatt aatcggccat atgctgattg
     1801 acaatgatca cgcaaaactc gtgcgcctca taaatgatac cgggacggta ttacaaaaaa
     1861 agcaatatca agaatcgacc tgtcttatc
//
LOCUS       DASCNL010000557         1751 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001154924, whole genome shotgun sequence.
ACCESSION   DASCNL010000557 DASCNL010000000
VERSION     DASCNL010000557.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001154924"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1227
                     /locus_tag="QF359_07450"
     CDS             <1..1227
                     /locus_tag="QF359_07450"
                     /inference="COORDINATES: protein motif:HMM:NF017044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HJO86779.1"
                     /translation="VVISNHRAPIVRHMVWYKVGAADEPRGKSGISHLFEHLMFKKTK
                     TLKSGEFSKIVARNGGRDNAFTSHDYTGYHQSISVDRLETVMKLEADRMRGLILEDDQ
                     IEPERQVVLEERRSRTDNSPGAKLSEQMNAVMYLNYPYHNPVIGWEHEIRGLTKADLK
                     KFYDQWYRPNNAILVVAGDITAKQLRPLAEKIYGVIPAGQPSKRVRTEEPPHNAAIRV
                     TLRDRQVRQPSIRRRYLAPSLQFGERKHVYPLEVLAQVFGGGSTSTLYRSLVVKQKLA
                     VSAGAFYDGDNMGPSSFDFFASPRPGVSIEDLEAALDQAITQLLENGVKKSNVTRAKN
                     TMLAEAIYARDSIGGGARVIGSALAAGQTIADVEEWPERIAKVTAAQLNAAAKAVLVE
                     KNSVTGLLLPKKRKGS"
     gene            1232..>1751
                     /locus_tag="QF359_07455"
     CDS             1232..>1751
                     /locus_tag="QF359_07455"
                     /inference="COORDINATES: protein motif:HMM:NF012879.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HJO86780.1"
                     /translation="MLNNFVALMSAALFLFTTPDVKAIEIKEIISSKGIKAWLVEDHT
                     NPIITVSLAFRGGSALDPVGKEGLANLVSSTLDEGAGDIKSQEFQQKLEDLAISLSFD
                     SRLDSFLISLRTLKKNQAIAFDLMRLAISKPRFDSEPVERIRSQIIANIRHQSENPRR
                     IAQRTLFTKLFPG"
BASE COUNT          448 a          450 c          439 g          414 t
ORIGIN      
        1 gttgtaattt caaaccatcg ggcgccgatt gtgcgtcaca tggtgtggta caaagttggc
       61 gcggctgacg agccgcgggg caaatccggt atttcgcatt tatttgagca ccttatgttc
      121 aagaaaacca aaactctcaa atccggtgag ttttctaaaa ttgttgcacg taatggcggc
      181 cgtgataatg ctttcacctc acacgactat accggttacc atcaaagcat ttcagttgat
      241 cgcttggaaa ccgtgatgaa actggaagct gaccggatgc gcgggctcat attagaagat
      301 gatcaaattg agcccgaacg ccaagtcgtg ctcgaagagc ggcgctcgcg gactgacaat
      361 tctcccggcg ccaaactgtc tgaacaaatg aatgcggtga tgtatttaaa ctatccctac
      421 cataatccgg taattggctg ggagcacgag attcgcggtc tgactaaggc cgatcttaaa
      481 aaattctatg atcaatggta tcgacccaat aatgcgatac tcgttgtcgc tggtgatatc
      541 accgccaaac agctgcgtcc tttggcagaa aaaatttatg gtgtcattcc ggctggtcag
      601 ccaagcaaac gtgtgcgcac cgaagaaccg ccccataacg ctgccatccg ggtaacgcta
      661 cgggaccgcc aggtgcgcca acccagtatc agacgccgct atctggcgcc aagcctgcaa
      721 tttggcgagc gcaaacacgt ctatcctttg gaagttcttg cccaggtttt cggcggcggc
      781 tcaaccagca cgctttaccg gtcattggtg gtgaagcaga aactcgcggt ctctgccggc
      841 gcgttttatg acggtgataa tatgggtcct tcaagcttcg acttttttgc cagcccccgc
      901 cctggcgtct cgattgaaga tctagaggcg gctcttgacc aggcaattac gcagctactt
      961 gaaaatggtg tcaagaaatc gaatgtcacc cgcgccaaga acacgatgct ggcggaagcc
     1021 atctatgccc gggattctat cggtggtggc gcgcgggtaa tcggctcggc cctcgctgcc
     1081 ggacaaacca tagccgatgt tgaggaatgg ccagagcgca ttgccaaagt cacggcagcg
     1141 caactcaatg ctgccgccaa agccgtatta gttgagaaaa acagtgttac cggactgctg
     1201 ttgccgaaga aaagaaaagg gagctaagca gatgctaaat aatttcgttg cgttaatgtc
     1261 agctgcgctt tttcttttta ccactccaga tgttaaagct atcgagatta aagagattat
     1321 atccagcaaa ggtatcaaag cctggctggt tgaggaccac accaatccga tcattactgt
     1381 tagcctcgcc tttcgcggcg gctcggcgct cgacccggtc ggtaaggaag ggctggcgaa
     1441 tttagtttca tcaactttgg atgaaggagc cggcgacatt aaaagccagg agttccagca
     1501 aaaactggaa gatttggcaa tatctttaag ctttgattcc cggctcgata gttttttgat
     1561 ctcattacgg accttgaaaa aaaaccaggc gattgctttc gatctgatgc ggcttgccat
     1621 ctccaaacca cgctttgatt cggaaccagt cgagcgcatc cgcagccaaa tcatagccaa
     1681 tattcgccac caatcagaaa acccccggcg tattgcccag aggacacttt ttaccaaact
     1741 gtttcccgga c
//
LOCUS       DASCNL010000558         1153 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001156907, whole genome shotgun sequence.
ACCESSION   DASCNL010000558 DASCNL010000000
VERSION     DASCNL010000558.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001156907"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(259..1023)
                     /gene="tpiA"
                     /locus_tag="QF359_07460"
     CDS             complement(259..1023)
                     /gene="tpiA"
                     /locus_tag="QF359_07460"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HJO86781.1"
                     /translation="MSVQRRPLIAGNWKMNGLRETAIPLVGELATKMNTAAPTSFDML
                     VCPPATMIDAVVDVAYETDLAVGGQDCHMAESGAHTGDISAQMLKDLGCSYVIVGHSE
                     RRADHGEMDDVVCAKAEAAQAAGLIAVVCVGETETERDKGITIDVVAAQIAGSVPPDS
                     NAGNVVVAYEPVWAIGTGRTPTNDEVQDVHAMMRGKISELLGADEAASIHLLYGGSVK
                     PSNAVELMGLPDVDGALVGGASLSHDDFWAIAEACS"
BASE COUNT          279 a          312 c          266 g          296 t
ORIGIN      
        1 cgccaacaac aagtgaataa cgataattac cgtttccatt actttattcc gtttccgata
       61 aattcttgcc ttcatatgag ctcaaaagcc tgcgaagcaa tctttatctc taaaatttag
      121 gcgccttgta tatgtttcgg agggatttgg caaattagat tttaagtcgg tgacaattta
      181 cttttttatt ggtgccgtaa actgtgagca aatttttaaa aagtaaattg tcaccgaaat
      241 agctagcgat atattttatt aggagcaggc ctccgcaatc gcccaaaaat catcgtggga
      301 caggctcgcg ccacctacca aagcgccatc aacatccggc aaacccatca gttcgacggc
      361 attactgggt ttaaccgagc cgccatacag caggtgtata ctcgccgcct catctgcacc
      421 cagcagttct gaaattttac cgcgcatcat cgcatgaaca tcctgaactt cgtcattggt
      481 cggcgtgcgg ccggtaccaa ttgcccaaac cggctcatag gcaactacta cattgcccgc
      541 gttggagtct ggtggaacgg agccagcaat ttgcgccgca acgacatcta ttgttatgcc
      601 tttgtcacgt tcggtttcgg tttcaccgac acagacgacg gcgattaggc cggcagcctg
      661 ggcagcttcg gctttggcgc acaccacatc atccatttcg ccatgatctg cgcggcgctc
      721 tgaatgacca acgatgacgt agctgcaacc caaatctttc aacatctggg cactgatatc
      781 ccccgtatgc gcgccgcttt ccgccatatg gcaatcctgg ccaccgactg caagatcggt
      841 ctcataagca acatccacga cggcatcgat catggtcgct ggtgggcaaa ccagcatatc
      901 gaagctcgtt ggagccgcag tgttcatctt agtcgccaat tccccgacaa gcggtatggc
      961 ggtttcacgg aggccgttca ttttccaatt gcccgcgatc aaggggcgtc gttgaacact
     1021 cattttgttt tcctgtagtt aggccaataa tttgccgctt acttaacatg gcaggctggg
     1081 cctggctaca gctccgacgg ccatattatc tcgtaatgtg tggtgaaggg gctaaacacg
     1141 tcagtaatgc gag
//
LOCUS       DASCNL010000559         3339 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001157019, whole genome shotgun sequence.
ACCESSION   DASCNL010000559 DASCNL010000000
VERSION     DASCNL010000559.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3339)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3339)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3339
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001157019"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..585)
                     /locus_tag="QF359_07465"
     CDS             complement(<1..585)
                     /locus_tag="QF359_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HJO86782.1"
                     /translation="MKCFIGIDLGSTTTKAVLMDEDKEVLGQGITNSRSNYDTAAAVS
                     KQEAMISTRFTLMRRGFENVASAKDSMDDIMSSLERNFRLEQFREQLDDLRTTCKGFV
                     TDDRFKANADATKAVLDKTFNQLNDEAAALFAPGAKRKSDFFRDIAGGSFMNIAEEEA
                     KKADLSYDLLLNVYDKSIIKVENRPPAGDMNNKFT"
     gene            complement(605..1897)
                     /gene="bcrB"
                     /locus_tag="QF359_07470"
     CDS             complement(605..1897)
                     /gene="bcrB"
                     /locus_tag="QF359_07470"
                     /EC_number="1.3.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018522 - benzoyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA reductase subunit B"
                     /protein_id="HJO86783.1"
                     /translation="MSNDNNPEVKKDTSMLKQKEMIAGNYEKLTNAKELGLKTSSTFV
                     PGNLNELTRCFDIVNNLPEINALGNAMRKQSGAMISDAEKMGHSEDVCTYVKADIGMM
                     AKGNIAPNGKPMPNPDMLLLSYTGCYTFLKWFELLREQYKCPTVMLHVPYQGDGKGQI
                     TQSMRDYVVKQIKEEVIPTMEQVSGVKFDIDKLRELMRNSAKAEDNLVWVLQSAKKKP
                     SPIDGYFGAVYYIGPIFSAFRGTTDAVEFYDLLRGEIQERTDKGLGPVTPDGEMGKEK
                     YRLVTEGPPNWTNFREFWKMFYDEGAVCVASSYSKVGGVYDYDGFRHDPENPIESLAE
                     YCLGCYTNRNLPERTKMMADYIEDYEADGLLINSIKSCNSFAAGELLMLREVENLTGK
                     PGAFIETDLVDPRYFSPANVKNRLESYFQMIEQKRQAA"
     gene            complement(1894..3069)
                     /gene="bcrC"
                     /locus_tag="QF359_07475"
     CDS             complement(1894..3069)
                     /gene="bcrC"
                     /locus_tag="QF359_07475"
                     /EC_number="1.3.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018522 - benzoyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA reductase subunit C"
                     /protein_id="HJO86784.1"
                     /translation="MSDMSVKEIIDRCEEIFEDLNFTYAREWKVAEDGRKVVGYMPVY
                     VPNEIIHAAGMLPIGILGGGDAMEVIHGDAYYQSYICRIPRSTVELGIMKNLDFVDGM
                     LFPSICDVIRNLSGVWKLLFPEVYARYFDTPQNFRSDIGGEFYKNDLQELREGLEKLG
                     GREITDDDLRNSIQVYNENRDWVRKVYQFRSDQPWKVPASEVYLLMRAGEILTPEDHT
                     QMMKDYLAAVENEERRMKDNCRVVLNGSFCEQPPLGLVKSIELAGCYVVDDDYMMINR
                     MITEDIPTDGDPLLNLSEAFLKHSLDLASKFEPSEEKKGKFIVELVRERGAEGVIFSA
                     PSFCDPALLDQPMLAHVLDDANIPYISFQYAENSGQMQPIREQAGTFADSIKLWSAA"
     gene            complement(3106..>3339)
                     /locus_tag="QF359_07480"
     CDS             complement(3106..>3339)
                     /locus_tag="QF359_07480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclohexa-1,5-dienecarbonyl-CoA hydratase"
                     /protein_id="HJO86785.1"
                     /translation="DDPEAAALAYFDEQLAPVSASVLRFAVQAAREDYADRFAAKMVK
                     LEELYTSGLMETEDAVEGLNAFLEKRSAVWKNQ"
BASE COUNT          838 a          832 c          752 g          917 t
ORIGIN      
        1 ggtgaattta ttattcatgt cacctgccgg cggacggttt tccaccttaa tgatcgactt
       61 atcgtaaaca ttgagaagca ggtcataaga gagatcagct ttttttgcct cttcctcggc
      121 aatgttcatg aaagaaccac cggcgatatc acgaaaaaaa tctgatttcc gcttagcacc
      181 tggcgcgaac agcgctgcag cttcatcatt gagctgattg aaagtcttat ccagaaccgc
      241 tttggtcgca tcggcgttgg ctttaaaacg gtcatcggtc acgaaccctt tacaggtggt
      301 ccgcaaatca tccaactgtt cgcgaaattg ttcaaggcgg aagttccgct ccagagacga
      361 cataatatca tccatggaat ccttggcgct ggcgacgttc tcgaagccgc ggcgcatcag
      421 agtaaagcgg gttgagatca tcgcttcctg tttggataca gcagccgccg tatcgtaatt
      481 ggaacgagag ttcgtgatac cttggcccaa aacttcctta tcctcgtcca tcaggacggc
      541 tttggttgtc gtcgaaccaa gatcaatacc aataaaacac ttcataatta aatgtctcct
      601 acactcaagc cgcttggcgt ttttgttcga tcatttggaa gtaactttcc aaacggtttt
      661 taacgttagc gggtgagaaa taacgcggat cgaccagatc ggtttcaata aatgcgcctg
      721 gtttacctgt aagattttcg acttcacgca gcatcagcaa ttcgccggca gcgaagctgt
      781 tgcagctctt gatcgagttg atcaacagac cgtcggcctc ataatcctca atatagtcag
      841 ccatcatttt ggtgcgttca ggcaggttcc ggttggtgta gcaaccgaga caatattcag
      901 ccaggctttc aatcggattt tccggatcat ggcggaaacc gtcataatca tatacgccac
      961 ccactttaga gtaggaactg gcgacacaaa ccgcgccttc gtcgtagaac attttccaga
     1021 actcgcggaa attggtccag ttcggcgggc cttctgtaac caggcggtat ttttccttac
     1081 ccatttcgcc atccggcgta accggaccta aacctttgtc ggtgcgttct tggatttcac
     1141 cacggaggag atcgtaaaat tctacagcgt ctgtagtgcc gcggaaggcc gagaaaattg
     1201 gtccaatata atagaccgca ccaaaatatc catcgatggg agatggtttt ttcttagccg
     1261 attgcagcac ccaaaccaaa ttgtcttcgg ctttagcgga attccgcatc aactcacgta
     1321 atttgtcgat gtcgaactta acgccggaaa cctgctccat ggtaggaatg acttcttcct
     1381 tgatttgttt aaccacatag tcacgcatac tttgggtaat ttgacctttg ccgtcaccct
     1441 gataaggaac atgcagcata actgttgggc atttatactg ctcgcgcagc aattcaaacc
     1501 atttcaggaa ggtgtaacag ccggtgtagg acaacaataa catgtccggg ttcggcatgg
     1561 gtttgccgtt aggcgcgata ttgcccttgg ccatcatgcc gatgtcagct ttcacatagg
     1621 tgcaaacatc ttccgaatgg cccatcttct cggcgtcaga tatcattgca ccggactgct
     1681 tgcgcatggc gttaccgagc gcattgattt ccggcagatt gttgacaata tcaaaacaac
     1741 gggtcaactc gttaagatta ccgggaacaa atgtcgaaga tgtttttaga ccaagttcct
     1801 tggcattggt cagtttctca taattaccgg caatcatttc tttctgcttc aacattgaag
     1861 tatctttttt gacttcggga ttgttatcgt tactcatgct gcgctccata gtttgattga
     1921 gtctgcgaaa gttccggctt gttccctgat aggctgcatt tgcccggaat tttcggcata
     1981 ttgaaaggag atgtaaggaa tattggcgtc atcgagaaca tgggccagca tcggctggtc
     2041 cagcaatgcg ggatcgcaga aacttggggc ggagaaaatg acgccttcag cacccctctc
     2101 acggactaac tcaactataa acttgccctt tttttcttcg cttggttcga attttgaggc
     2161 gagatccaat gagtgtttga ggaaagcttc agagagatta agcagcggat caccatcggt
     2221 aggaatgtct tcagtaatca tccgattgat catcatgtag tcatcatcta ccacataaca
     2281 gccggctagt tcgatggatt taaccaaacc tagcggcggt tgttcacaaa aggatccatt
     2341 gagaacgacg cggcagttat ctttcatgcg gcgttcttca ttttcgacgg cggccagata
     2401 atctttcatc atctgcgtat gatcttccgg cgttaaaatt tcgccggccc gcatcagcag
     2461 atagacttca gaagccggta ctttccaagg ctgatccgaa cggaattgat agactttccg
     2521 gacccagtca cggttctcat tgtaaacctg gatcgaattt ctgagatcat catcagtaat
     2581 ttcccggcca ccaagttttt ccagaccttc gcgcaattcc tgaagatcgt ttttgtaaaa
     2641 ctcgccgcca atatcgctgc ggaagttctg cggcgtatcg aaataacggg cataaacttc
     2701 gggaaatagc aatttccaca cacccgagag attgcggatt acgtcgcaaa tacttgggaa
     2761 taacataccg tcaacaaaat cgaggttttt cataatgcct agttcgacgg tcgagcgcgg
     2821 aatacggcaa atgtagcttt ggtagtaagc gtcaccgtgg ataacttcca tggcgtcgcc
     2881 accacccaga atgcctatgg gcagcattcc ggcagcgtga attatttcat tcggcacgta
     2941 aaccggcata taaccgacta ctttgcgccc atcctcggca actttccatt cccgcgcata
     3001 tgtgaagttc aaatcttcaa atatttcttc gcaacggtcg ataatttctt ttacagacat
     3061 atcactcatc tttccttgtg gacttaattt cctaaaattt cggtcctatt gattcttcca
     3121 tactgctgaa cgtttttcca aaaatgcgtt caaaccttca accgcatcct cggtttccat
     3181 cagtcctgac gtgtataatt cttcgagttt taccattttt gccgcaaagc gatcggcgta
     3241 gtcttcccgc gctgcctgaa cggcgaaacg caggacactg gcgctgacgg gcgccaactg
     3301 ttcgtcaaaa tatgcaagag cggcggcttc cgggtcatc
//
LOCUS       DASCNL010000560         3777 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001161046, whole genome shotgun sequence.
ACCESSION   DASCNL010000560 DASCNL010000000
VERSION     DASCNL010000560.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3777)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3777)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001161046"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            100..888
                     /gene="modA"
                     /locus_tag="QF359_07485"
     CDS             100..888
                     /gene="modA"
                     /locus_tag="QF359_07485"
                     /inference="COORDINATES: protein motif:HMM:NF024921.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HJO86786.1"
                     /translation="MAALHLNNWSKYWIGGLLVMWGALSFSLPPAQAKDIMVFAAASL
                     ALPLQQIADSFAAKANHSIRISLAGSATLARQIGKGAPADIYISANQNWMEYAARKVP
                     LIAASRQHLLSNRMVLIGLANTNQPVSSLTTQAFSNLLQNGRLAIGDPDHVPAGIYAA
                     EALKRLNLWPTAKLKLARMNNVRAALAMVERGATPAGIVYQTDAFKNSKVAVIYRFPA
                     SAHRQISYWAARVRDQNATNKAFFKFLFSSAAKAVFKRHGFLVN"
     gene            893..1585
                     /gene="modB"
                     /locus_tag="QF359_07490"
     CDS             893..1585
                     /gene="modB"
                     /locus_tag="QF359_07490"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015098 - molybdate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HJO86787.1"
                     /translation="MFSPTALELEALCLSLKVALWSVLITLPLGLLFAWILARKDFYG
                     HALLNGIIHLPLVLPPVVVGFFLLSLLGRQGPVGAFLHDAFGLTVAFTWQGAAIASSI
                     MSFPLMVRAIRLSIENVDSGLEAAARTLGASPFRVFYSITLPLISPGILAGIILAFAR
                     SLGEFGATITFVSNIPGETRTLPLAIFSLVQTPSGDAGALRLVVFSIILALAALLIAE
                     YLAARAKRRIEG"
     gene            1589..2704
                     /gene="modC"
                     /locus_tag="QF359_07495"
     CDS             1589..2704
                     /gene="modC"
                     /locus_tag="QF359_07495"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
                     /protein_id="HJO86788.1"
                     /translation="MLEVSFNHNFEEFRVELDFQAEAGSITSLFGRSGTGKTSVINMI
                     AGLTKPEIGYVKVGGEVLFDSTKGINAPPEKRRLGYIFQDSRLFPHLSVRNNLLFGAK
                     NLARNGQEITFDRVVDVLDIGGLLERKPANLSGGEKQRVAIGRALLSQPRLLMMDEPL
                     ASIDVQLRSEILPFIEDLRDTFGLTVIYVSHAIEEVIRLADKLVLLSNGIKAAEGNVE
                     EIMSRLDLHPLTGRFDAGAVLTTKVASYDLEFDLTELAFIGGHLRVTGVDLPIGTALR
                     AHIRARDVSLMLKRPEGTSILNVFEGTIIEVGDEGGPQLDLKIDIGSPLLARVTRKSF
                     KDLNLAVGKTVFAMIKAVAFDRRSLGGQIVTKRPDSI"
     gene            complement(3002..3592)
                     /locus_tag="QF359_07500"
     CDS             complement(3002..3592)
                     /locus_tag="QF359_07500"
                     /inference="COORDINATES: protein motif:HMM:NF013077.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HJO86789.1"
                     /translation="MLDKTDNPIIEFLRTRRSVVAANLGEPGPTEDELNTIIEVGLRV
                     PDHSRCGPWRIQIIRKDAQAKLGELYAELFAKESKTPTEEMIEYWRLRPQSAPILLAI
                     TCYPKEEKLEKIPLWEQILSGGALCQNILNASHAMGYSAQWLSEWPSYHKDVKNLLGH
                     KEDTEIYGFIFIGTAIMPPKERKRIGAEDVVSEWLG"
BASE COUNT          878 a          994 c          909 g          996 t
ORIGIN      
        1 ccgggcggcg caactgtttt ttcaatgccg tgcgcgatgg taaaatagag atcatcgccg
       61 aagttgagat cgatccagac cagctataca agaaataaca tggcggcgct acacctcaat
      121 aattggtcaa aatattggat tggtggtttg ctggttatgt ggggcgcgct ttccttttct
      181 ctaccgccag cccaagccaa agacatcatg gtatttgccg ccgccagcct cgccctgcct
      241 ctgcaacaaa tagctgatag ctttgccgca aaagccaatc acagtatccg catttcgctt
      301 gctggcagcg ccacgctagc acgccaaatt ggcaaaggcg caccggcaga tatttatatc
      361 tccgccaatc aaaactggat ggagtatgcc gccaggaagg tgcctcttat cgccgccagc
      421 aggcagcacc tgctatccaa cagaatggta ctcattgggc ttgctaatac caaccaaccg
      481 gtgagttccc ttacaacgca agcgtttagc aatcttttgc agaatggtcg tttagccatt
      541 ggcgacccgg accatgtccc cgccggcata tacgctgccg aagccctcaa gcggctcaat
      601 ttatggccaa ctgccaagct caaattggcc cgcatgaata acgtgcgggc tgccttggcg
      661 atggttgaac gcggtgccac tcccgccggc atcgtctacc aaaccgatgc ctttaagaat
      721 tcaaaagtgg ccgtaatcta ccgttttcca gcatcagcac accggcaaat cagctattgg
      781 gcggcacgcg taagggacca aaacgccacc aataaggcat ttttcaagtt tcttttcagc
      841 tcagcggcaa aagctgtttt caaacgccat ggttttctgg tgaactaggc aaatgtttag
      901 cccgaccgcg ttagaattag aagcgctttg tcttagcctc aaggttgctt tgtggagcgt
      961 tttgatcacc ctgccacttg gcctcctgtt cgcatggatc ttggcgcgaa aggatttcta
     1021 tggccacgcc ttactcaatg gtatcatcca tttgccattg gtgctgccgc cagtcgtcgt
     1081 cggttttttt cttttgagcc tgctgggacg acaaggaccg gttggggcat ttctccatga
     1141 tgcttttggt ttgaccgtcg cctttacctg gcaaggggcc gccattgcat cgtcgattat
     1201 gtcctttccc ttaatggtcc gcgctatccg cttgtcgata gaaaatgtcg atagcggcct
     1261 cgaggccgcc gcccgcaccc tcggtgcatc acccttccgg gttttttatt ccattaccct
     1321 gccgctgatc tcgcccggta ttctggccgg cattatcctc gcctttgcac gcagtcttgg
     1381 tgaatttggt gcgaccatta cctttgtctc caacattcct ggcgaaaccc gcacacttcc
     1441 actggcaatt ttttcccttg tccaaacacc gagcggtgat gccggtgcac tccggctcgt
     1501 tgtcttctct ataatcctgg ctttggctgc tttgttgata gctgaatatc tggcagcccg
     1561 cgccaaacgc cggatcgagg gttagctgat gctggaagtc tcttttaatc acaattttga
     1621 ggagtttcgg gtcgagctag atttccaggc cgaagctggc agtatcacca gtctgttcgg
     1681 acgctcgggt accggcaaga catctgtcat caatatgatt gccgggttga ccaaaccaga
     1741 aattggctat gtaaaagtcg gcggtgaagt gctgtttgat tcgaccaagg gcatcaatgc
     1801 gccgcccgaa aagcggcggc tgggctatat ttttcaagac agccgtttat tcccgcatct
     1861 cagtgtccgc aacaacctgc tctttggcgc gaagaattta gctaggaacg gccaggaaat
     1921 cacctttgat cgcgtggtcg atgtgctcga cattggaggt ttgctggaac gcaagccagc
     1981 caatctttcg ggcggcgaaa aacaacgggt tgctattggc cgtgccctct tgtcgcaacc
     2041 acgcctgctg atgatggatg agcctttggc ctcaattgat gttcaactgc gcagtgaaat
     2101 cctgcccttc atcgaagacc tacgagatac tttcggctta acggttatct atgtcagcca
     2161 tgccatcgaa gaagttatcc gcctcgctga taaattggtt cttctttcta acggtattaa
     2221 agccgccgaa ggaaatgttg aagagatcat gagccgcctt gatctccacc cgctgactgg
     2281 gcgctttgac gcaggtgccg tgctgacgac caaagtcgcc agctatgatc tggaattcga
     2341 tctgacagag ctcgctttta ttggcggtca ccttcgggta actggtgtcg acctaccaat
     2401 aggcacagct ttgcgcgccc atattcgggc gcgtgatgtc tcactcatgc ttaaacggcc
     2461 cgagggtacc agtatcctca acgtctttga aggtacgatt attgaggtcg gtgacgaagg
     2521 cgggccgcag cttgatctca aaatcgatat cggctcgccc ctgctggcac gcgttacccg
     2581 gaaatctttc aaagatctaa atttggcggt cggcaaaact gtttttgcca tgatcaaggc
     2641 cgtcgccttt gaccggcgca gtctgggcgg tcaaatagtc accaagcggc cagattctat
     2701 ttagggtttt ccttatcagg tccttgtctt ttttttatat ctcaccgatc gacttattaa
     2761 gcggctgaaa tctcagcaag tcacgcgata cctgggtaac atcgaaattt gagttggaaa
     2821 gctggtagtg ctggcgtacc aggggccaga ccccttcggc aataaccgtt gagcgaaccg
     2881 ggatcgcaat gccgatatgg cgacaaaaac cggctaataa attttacttc tcaagatcat
     2941 tcatcaaatt aaagagccag gcttcattgt ctgatctttg atttatgtcg gtcatcggtt
     3001 gctaccctaa ccactccgaa acaacatctt cggctccaat gcgtttacgc tctttcggcg
     3061 gcatgattgc cgtaccgata aaaataaagc cataaatttc cgtatcttct ttgtggccca
     3121 gcaggttttt gacgtcttta tgataggacg gccattccga caaccattgc gctgaatagc
     3181 ccatcgcatg cgaggcattt aggatattct gacagagcgc accgccggaa aggatttgct
     3241 cccagagcgg aatcttttcc aatttctctt ctttgggata acaggtgatc gccagtagga
     3301 tcggcgctga ttgtggacgc agccgccaat actcgatcat ttcctcagtt ggtgttttac
     3361 tttctttagc aaacaactca gcatagagct cgcccagttt cgcttgagca tctttgcgga
     3421 tgatctgaat acgccacggg ccacagcgcg aatgatccgg cacccggaga ccaacttcaa
     3481 tgatggtatt caactcgtct tcagttgggc ccggctcgcc gagattagcc gcgacaaccg
     3541 agcgccgcgt gcgtagaaat tcgataatag ggttatccgt tttatctaac atttcttagt
     3601 ccacatattc ccgcttacaa ttgaagcaca tacgatttgg caaaatgata aagggctgga
     3661 gaaaagcgtt gatcgatacc aggcaaatta caataattat gagatttata gcttataact
     3721 gtgatcatcc ataatttaat aaaattgaaa ataatatgta acaactacta gaataat
//
LOCUS       DASCNL010000561         2831 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001161958, whole genome shotgun sequence.
ACCESSION   DASCNL010000561 DASCNL010000000
VERSION     DASCNL010000561.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001161958"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            133..2127
                     /gene="phaC"
                     /locus_tag="QF359_07505"
     CDS             133..2127
                     /gene="phaC"
                     /locus_tag="QF359_07505"
                     /inference="COORDINATES: protein motif:HMM:TIGR01838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HJO86790.1"
                     /translation="MSKTDDTKGNAADFATQAQQMAQQMADQYAKQFTNQMADQAASQ
                     FTGQFNSNMSEWMSNWTKLAQGNFASNPAAAHSPFDPKNFKLPEMPEFPNMPTMPNFM
                     DAMDMSAFDFSEATKAAGNLKASSIPLPDPAKMFSAQLELMQDYQNLWLNTTSRMLGQ
                     EIKEPDIEPASDDFRFKDSEWLDSPIFNFIMQSYLLNTKWLWSVVGDIEGLDELGKAK
                     MEFYTRMITEAFAPTNNAFTNPMVVREIMQTKGQNLVQGFENYIEDLKDGYDMMRPRQ
                     TDLSAFEVGENIATAEGSVVFETPFMQLIQFAPTTDKVYKKPLMIVPPWINKFYILDL
                     REDNSFIRWAVGKGYTVFVISWVNPDESFADKSFDDYTAGGIFAALEAIERATGEKQV
                     TAIGYCIGGTLLAATLAYLAATEDDRISAVTFFAAQVDFAKAGELLIFSDEAQISMLE
                     REIRDVGYLDGAKMAATFNALRANDLIWYFVINNYLMGKEPPVFDLLYWNSDSTRFPY
                     RMLFDYLRNLYQKNLLSQPGGFELLGEKIDLRNIKIPTYILASKEDHIAPADSVFEAT
                     KLYAGQNRFVLAGSGHIAGVINPPEKNKYQHWTNSSKKAYAEFDDWFEDATETAGSWW
                     PDWHKWLAKKSGAKVMARKPGGGKLKVIEAAPGSYVKVKS"
     gene            2258..2545
                     /locus_tag="QF359_07510"
     CDS             2258..2545
                     /locus_tag="QF359_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HJO86791.1"
                     /translation="MQSLLFLVDQIIGLYMWCLIIVVIMSWLTSFNVINTQNRFVYQI
                     YDFLYRITEPALRPIRRWIPDLGGIDVSPVVLILLLVFVRNLLREYGGGLH"
     gene            2526..>2831
                     /locus_tag="QF359_07515"
     CDS             2526..>2831
                     /locus_tag="QF359_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HJO86792.1"
                     /translation="MAAVSTKPKPLLRIEHDTIRLDLKLTPKAKKSAITGQAVDTAGK
                     AYVKASVTAIPEHGKANAALIKLLATEWRLAKSQITIIRGQTSARKTVEITGEVNKMR
                     "
BASE COUNT          780 a          683 c          657 g          711 t
ORIGIN      
        1 cgatagctgg tctatcggta taaaatgcag atgtgattga gaacaatcat gttgataagt
       61 gtttgacaaa aatattaggg cgttggactt atttggtccg atgctcaatt ttttgcgata
      121 gaaaggcccc tcatgtccaa gactgacgat accaaaggca atgctgcaga ttttgctacc
      181 caagcgcaac aaatggcgca acagatggca gatcaatatg ccaagcaatt caccaatcaa
      241 atggccgacc aagcggcgag ccaatttacc ggtcaattca actccaatat gagcgaatgg
      301 atgtcaaatt ggacaaaact agcccagggt aattttgcga gcaatccagc agcagcccat
      361 tcgccttttg acccaaaaaa tttcaagctg ccggaaatgc ccgaatttcc gaatatgcca
      421 acaatgccaa attttatgga tgccatggac atgagcgcct ttgatttctc cgaagccacc
      481 aaagcagccg gcaatttgaa ggcgtcctcg atcccgctgc ctgatccagc aaaaatgttt
      541 tccgctcaat tggagctgat gcaggattac caaaatctct ggctcaacac gacgtcacgg
      601 atgctcggcc aggaaattaa agaaccggat atcgaaccag cgagtgatga tttccgcttc
      661 aaggattcag aatggttgga cagcccgatc tttaatttta tcatgcagtc ttatttgctc
      721 aatactaaat ggctgtggtc tgttgtaggc gatatcgaag ggcttgatga actgggtaaa
      781 gccaagatgg aattctatac ccgcatgatc acagaggcct ttgcaccgac caacaacgcg
      841 tttaccaatc cgatggtggt ccgagaaatc atgcaaacca agggccagaa tctagttcaa
      901 ggctttgaaa actatattga agatttaaaa gacggttatg acatgatgcg gccgcgccaa
      961 accgatctat ccgcttttga ggtcggcgag aacatcgcaa ccgccgaagg ctcggtggtg
     1021 tttgaaactc ctttcatgca actcattcag ttcgcaccaa cgaccgataa agtttacaaa
     1081 aaaccgctga tgatcgtgcc accctggatc aataaatttt atattcttga tctccgggaa
     1141 gataattcct tcatccgctg ggcggttggc aaaggctata cggtctttgt catatcctgg
     1201 gtcaacccgg atgaaagctt tgccgataaa agcttcgatg attatacggc gggcggcatt
     1261 ttcgcggccc ttgaggcgat cgaacgagct accggtgaaa agcaagttac ggcgattggc
     1321 tattgcatcg gcggcacctt actggcggca acgctcgcat atttggcagc gaccgaagac
     1381 gaccgcattt cggctgtcac attctttgcc gcacaggtcg actttgccaa agccggtgag
     1441 ttgttgattt tctccgatga agcgcaaatt tcaatgctcg aacgtgaaat acgtgatgtc
     1501 ggttatcttg atggtgccaa aatggcagcg acctttaatg cgctccgcgc caatgatctg
     1561 atctggtatt ttgtcatcaa caattatctg atgggtaaag agccgccggt cttcgatcta
     1621 ctctattgga attcagactc gactcgcttc ccctaccgta tgctattcga ttatcttcgc
     1681 aatctgtatc aaaagaattt attgtcacaa ccgggcggct ttgaattgtt gggcgaaaag
     1741 atcgatctca gaaatatcaa aataccgacc tatatcctgg ccagtaaaga ggatcacatc
     1801 gccccggcag actcggtctt tgaagccacc aaactatacg ccggtcaaaa ccgctttgtg
     1861 ttggcaggct ctggtcatat cgccggggtt atcaacccgc cggaaaaaaa taaatatcag
     1921 cactggacga acagctcgaa aaaagcttac gccgaatttg atgactggtt cgaagacgca
     1981 accgagaccg ctggttcttg gtggcccgat tggcataaat ggctggctaa aaaatccggc
     2041 gccaaagtca tggcgcgcaa acccggcggt ggaaagctta aagtaattga agctgcccct
     2101 ggcagctatg taaaggttaa gagctaacat caatgataac cgtcttgctg tcagctattt
     2161 tcagtctaaa taaggtttag actcttgcca taaatcggcc atgccgttag ggtttggtca
     2221 taaaattaag cagctaatcg ggaactaaag gccttccatg caatctttgc tgtttctcgt
     2281 tgatcagatt attggtcttt atatgtggtg cctcatcatt gtcgtgatca tgagctggct
     2341 cacttcgttt aatgtcatca atacgcagaa cagatttgtc taccagatct atgattttct
     2401 ctatcgtatt accgaaccgg cactgcgccc gatcaggcgc tggattcccg atctcggcgg
     2461 cattgatgta tcaccggtcg tgctgatact actgttggtt ttcgtccgca atttgctgag
     2521 agaatatggc ggcggtctcc actaagccta aacctctact gcgaattgag cacgatacca
     2581 ttcgcctcga tctcaaactt actccgaaag caaaaaagtc cgccattacc ggccaggccg
     2641 tggacactgc cggcaaagct tacgtaaaag cctcagttac cgccatccca gaacacggta
     2701 aagccaatgc agccttgatt aaattactgg ccacggaatg gcggctcgcc aaatcgcaga
     2761 ttacaattat tcgcggtcaa acaagtgcaa gaaaaacggt tgagatcact ggtgaagtca
     2821 ataaaatgcg g
//
LOCUS       DASCNL010000562         1443 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001165152, whole genome shotgun sequence.
ACCESSION   DASCNL010000562 DASCNL010000000
VERSION     DASCNL010000562.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001165152"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="QF359_07520"
     CDS             <1..183
                     /locus_tag="QF359_07520"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HJO86793.1"
                     /translation="FAGFAVLKAPDVPSILIEMGFLSNRADEQALRSKKYRTNLARAI
                     GSAVEEYFSHNQQVQR"
     gene            282..>1443
                     /locus_tag="QF359_07525"
     CDS             282..>1443
                     /locus_tag="QF359_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HJO86794.1"
                     /translation="MLRTLAIILSLLILIIFAGVGGGAYIFYKFGRGLPDYKQLADYE
                     PPVMTRVHAGDGRLLAEYAEQKRVFVPQVAMPKRVVKAFLSAEDKNFYYHPGIDPLGI
                     ARAVVTNIKNIASDRRLVGASTITQQVAKNFLLSGDVTIERKVKEAILAFRIEGALEK
                     NRILELYLNEIYLGFGSYGVAAAALNYFNKSLDTLTIAEAAFLAALPKAPNNYNPFKY
                     PKVARGRRDWVIGRMLEDGVITSKEARIAKLTPLVTRKRQETAYVKADYFAEEVRREL
                     ADRYGETNLYRGGLVVRTTLNPHYQKIADRALRNGLVAYDRRHGWRGPITNIDLSLDW
                     LGALSKVKTPPELSGDQNPWRLAVVRELLPERADIGIIDSRVGTIPLTEMKWA"
BASE COUNT          348 a          354 c          375 g          366 t
ORIGIN      
        1 tttgccggct ttgctgtgct gaaagctccg gacgtgccat caatccttat tgagatgggt
       61 tttctgtcca accgagccga tgaacaagcg ctgcgcagta aaaaataccg caccaattta
      121 gcccgtgcga ttggcagtgc agttgaagaa tatttctccc acaatcagca ggttcagcgg
      181 tgagttggct ggtcttcgat tgtctcttac gatctgccat aaacccgcca tattgttccc
      241 gtaattccca gtatctctat tgatgacact ctaggaaaaa gatgcttcgg acactcgcaa
      301 ttatactaag cttattgata ctaatcatct ttgcgggcgt tggcggcggt gcctatattt
      361 tttataaatt tgggcggggc ctgccggatt ataaacagct cgccgattac gaaccaccgg
      421 tgatgacgcg ggtgcatgcc ggagatggcc gtttactcgc tgaatatgcg gaacaaaaac
      481 gcgtttttgt gccccaggtg gcaatgccca agcgcgtggt aaaagctttt ttgtcagccg
      541 aagataagaa cttttattat catcccggta ttgatccact gggaatagcc cgcgctgtcg
      601 tgactaatat taagaatatt gcctccgacc gacggctggt tggagcctcg acaattaccc
      661 agcaagtggc gaaaaacttt ttactgtcag gcgatgtgac cattgagcgc aaagttaaag
      721 aagccattct cgcctttcgg attgagggcg cactggagaa aaatcgtatt ctcgagctgt
      781 acctcaacga gatttatttg ggctttggct cctacggcgt tgctgcagcc gcgctcaact
      841 atttcaacaa gtcactggat acactgacca ttgccgaagc tgcgtttttg gccgctttgc
      901 ccaaagcgcc caacaattat aatcccttca agtatcctaa agtagcacgt ggccgccgtg
      961 attgggtaat cggccgcatg cttgaggacg gtgtcataac atccaaagaa gcgcggatcg
     1021 ctaaactgac acccttagtc acccgcaagc gccaggaaac cgcatatgtt aaagctgact
     1081 atttcgccga agaggtgcgc cgggaattgg ctgatcggta tggtgagact aatctctatc
     1141 gaggaggctt ggttgttcga acaaccctca atccgcatta tcagaagatt gccgaccgcg
     1201 ctttgcgaaa cgggttggtg gcctatgacc gccgtcatgg ctggcgcggt cctattacta
     1261 atattgattt gtcacttgat tggctgggcg cactatccaa ggtaaaaacc ccaccggaac
     1321 tgagcggtga tcagaatcct tggcgcctgg cggtggtgcg ggaactgttg cctgagcgag
     1381 ctgatatcgg gattatcgat agccgggtag ggacgatacc gctgactgaa atgaaatggg
     1441 cgc
//
LOCUS       DASCNL010000563         2628 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001166538, whole genome shotgun sequence.
ACCESSION   DASCNL010000563 DASCNL010000000
VERSION     DASCNL010000563.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2628)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2628)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001166538"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1169
                     /locus_tag="QF359_07530"
     CDS             <1..1169
                     /locus_tag="QF359_07530"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86795.1"
                     /translation="APIGVKGISLFLVPKIIPKSDGKLGKKNNLECGSIEDKMGIKAS
                     PTCVMHYNEAKGWLVGELYKGMDAMFVMMNGARLMVGVQSLGMAEVAYQSALYYARDR
                     LQGRSLHGAKNPKKPADPIIVHPDVKKNLLKLKSLTEGVRGLVALTALQLDLARVEKD
                     KFKKQMAEDWVALLTPIIKAYGSDIGSEAANLAVQIYGGHGYIKEHGVEQLVRDARIT
                     QLYEGTNGIQALDLVGRKLPMHNGRLLRSFFHVVKGYIEKNTSNSNLSDFIPALMKSF
                     GRLQQVTTVIASKGLSDPDEGAGPATDYLKMFALTAVAYVWTRFAEISYKKQNDDPTG
                     FYKAKIETGKFYMNKLLPETGYLMSSIMSGAKIYTEYNEAYFDTSFSYEFNEWN"
     gene            complement(1464..>2628)
                     /locus_tag="QF359_07535"
     CDS             complement(1464..>2628)
                     /locus_tag="QF359_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO86796.1"
                     /translation="LLTPIMAPSVVAGKDIKIGVILGFTGPIESLTPAMAKSAELAFK
                     EASDSGLLLGGKKIAAVRADSTCIDSAAATAAAERLITSDGVAAILGADCSGVTGAIA
                     NNVAVPKGVVMISPSATSPGLSTIKDNGFFFRTSPSDARQGQVLANVVKRRGIKEVAV
                     TYTNNDYGKGLANSFSNAFKASGGKVSISAGHEDGKADYSAEVGALSAAGSKHLAVFG
                     YVDQGGKGIIRASLDSGAFNSFILADGMVGPTLIKAIGKEPVDAFGTRPGGKSKGAQI
                     YMGMAEKAGIKIDGPYVGESYDGAALITLAMQAAGSANRSAIQSKIMMVANAPGAKIM
                     PGEIAKGLKILSGGGDVDYVGATAVEFNKVGEVLGSIMEFEVKGGAFKTIKIH"
BASE COUNT          755 a          561 c          638 g          674 t
ORIGIN      
        1 atgcaccaat cggtgtaaag ggaataagtt tatttttggt tccgaaaatt atcccaaaat
       61 cagatggtaa attaggcaaa aaaaataatc tcgaatgcgg atccatcgaa gacaaaatgg
      121 gaattaaagc aagccctaca tgtgtaatgc attacaatga agcaaaggga tggctagttg
      181 gtgaattata taaaggtatg gatgccatgt ttgtaatgat gaatggcgct aggttgatgg
      241 taggcgttca aagtttgggg atggctgagg tggcctatca gtcagcctta tattatgcaa
      301 gagatcgact tcaagggcgt tcactgcatg gagcaaaaaa tccaaaaaaa ccagcagatc
      361 caattatagt acatccagat gtgaaaaaaa atttattgaa attaaaaagc ctaactgagg
      421 gcgttagagg cttggtagca ttaacagcac tacagttaga tttggcgcgc gtagaaaaag
      481 ataaatttaa aaagcaaatg gcggaggatt gggtggctct gcttacacca ataattaaag
      541 cttacgggtc tgacattggt tctgaagcgg caaacttagc tgtgcagatt tatggtggac
      601 atggatacat caaggaacat ggagtagaac aactggtcag agatgctagg attactcaac
      661 tttatgaggg cacaaatggt atacaagctc tggatttagt cgggcggaaa ctgccaatgc
      721 acaacgggcg tctattacgt agtttttttc acgttgttaa aggttacatt gaaaaaaata
      781 cgtcaaacag taatttaagt gactttatac ccgcattgat gaaatcgttt gggaggcttc
      841 agcaggttac aaccgttatt gcatccaaag gtctttctga tccagatgag ggggccggtc
      901 ctgcaactga ttatttgaaa atgtttgcac taacggcagt tgcctacgtt tggacacgct
      961 ttgctgaaat ttcttataaa aaacaaaatg atgatcctac aggattttat aaagctaaaa
     1021 ttgaaaccgg gaaattctat atgaataaat tgttacccga aacaggctac ttgatgtcaa
     1081 gtataatgtc gggggctaaa atttatacgg aatataatga ggcatatttt gataccagtt
     1141 tcagttatga atttaatgag tggaattaga tgtcggctcg aatttacagc ctgaagcatt
     1201 atagattctg gattagatct gagattcttt gtgtatagaa gtatgtgata ttaaatttca
     1261 ctattagtga aacgttggaa atcaatagtt tatacctgag tagtagctga taagatggag
     1321 tcccgctcca ccgccggatg acagtcctgg atttctgcca atggcccggc cacggtgcct
     1381 tcgggtaggt aagaggccac cgatattgat ttgaaccgag caacccgaag attgctcggt
     1441 tcaaaaggtt gagtgtatgt aaattagtga atttttatag ttttgaacgc gccacctttc
     1501 acctcaaatt ccatgatgct accgagcacc tcaccaacct tattgaattc aacggcggtt
     1561 gcaccgacat agtcgacatc accaccgccg ctgagaattt tcaagccttt ggcgatttca
     1621 ccaggcatta tttttgcccc tggcgcattg gcaaccatca taatttttga ctgtatggca
     1681 gaacggttgg cggaaccggc cgcctgcatg gctaacgtga tcagagcagc accgtcgtaa
     1741 gactcaccca catatgggcc gtctatcttg atgccagcct tttcagccat gcccatgtaa
     1801 atttgcgcac ccttcgattt tccgccggga cgggtaccga aggcatccac cggttccttg
     1861 ccaattgctt taatcagagt ggggccgacc atgccgtcgg ccaggatgaa gctattaaag
     1921 gcaccgctgt cgagcgaagc ccggataatt cccttgccgc cttgatccac gtaaccgaac
     1981 acggcgagat gttttgagcc agccgccgac aaggcgccga cttcggcaga atagtcagcc
     2041 ttgccatctt catggcctgc ggagatagaa accttaccac cggatgcctt gaaggcgttg
     2101 ctgaaagaat tggctaaacc cttaccgtaa tcgttattgg tgtacgtgac ggctacttct
     2161 ttgatgccac ggcgcttcac tacgttggcc agaacctgac cttggcgggc atcggacggc
     2221 gaggtccgga aaaagaaacc attatccttg atcgtagaga gacctgggga tgtagccgat
     2281 ggagaaatca taacgacccc tttgggaacg gcaacattgt tagcgatagc accggtgacg
     2341 ccggagcagt cagctcccaa aatagcggca acaccatcag aagtaatcag acgctcagct
     2401 gcagcggtag ctgccgctga atcaatgcag gttgaatctg cacgtaccgc tgcgatcttc
     2461 tttcctccca gcaatagtcc agaatccgac gcttccttaa aagccaattc ggccgatttg
     2521 gccatggctg gagttaaaga ctcaattggg cctgtgaaac ccaggatcac gccgattttg
     2581 atgtctttgc ctgcaaccac ggaaggggcc ataatcggag tgagcaag
//
LOCUS       DASCNL010000564         1159 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001167266, whole genome shotgun sequence.
ACCESSION   DASCNL010000564 DASCNL010000000
VERSION     DASCNL010000564.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1159)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001167266"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..769)
                     /locus_tag="QF359_07540"
     CDS             complement(<1..769)
                     /locus_tag="QF359_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012812902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJO86797.1"
                     /translation="MANQVLMPALSPTMTEGMLAKWLKKEGDVVQSGDVLAEIETDKA
                     TMELEAVEDGILGKIIVAEGSEGVAVNTPIAVIVDKGENASNVEISALPPAAEASPEP
                     EPEAVPTQPAAPKPAPVSEDAYTGSTTTLTVREALRDAMAEEMRTDDTIFLMGEEVAE
                     YQGAYKISQGLLEEFGGKRVIDTPITEHGFTGLSVGAAFGGLKPIVEFMTFNFAMQAM
                     DHLINSAAKTLYMSGGQMGCPAVFRGANGAAAGVAAQH"
     gene            complement(785..>1159)
                     /locus_tag="QF359_07545"
     CDS             complement(785..>1159)
                     /locus_tag="QF359_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO86798.1"
                     /translation="GIPGVSVDGMDVLAVKEAGEKALDHARSGKGPYILGMQTYRYRG
                     HSMSDPAKYRSREEVSKIRSERDPIDRARQYILDAKAADNDGLKQVDADVKAIVSDAA
                     DFAQQSPEPEMFELYTDILVEA"
BASE COUNT          249 a          330 c          275 g          305 t
ORIGIN      
        1 aatgctgagc cgcgacacca gccgctgcac cattggcgcc ccggaacact gccgggcaac
       61 ccatttgccc gcccgacata taaagcgtct tagcagctga gttgatcagg tgatccatcg
      121 cctgcatggc aaaattaaag gtcatgaatt cgacgattgg ttttagccca ccgaaggcag
      181 caccgacact gagcccagta aagccgtgct cagtaatcgg cgtatcaatt acccgcttac
      241 cgccgaattc ttctaacagt ccttgggata ttttataggc gccttgatac tccgcaactt
      301 cctcacccat cagaaaaatc gtgtcatcgg ttcgcatttc ttccgccatc gcgtctctaa
      361 gtgcttcacg aaccgtcaat gtggtggttg atcccgtata ggcatcttca gatacggggg
      421 caggttttgg agcagcaggt tgagttggca cggcttctgg ttccggctca gggctcgctt
      481 ctgcggccgg tggcagcgcg ctaatttcga cgttcgacgc attctcacct ttgtcgacaa
      541 tcaccgcgat aggtgtgttg acggcaaccc cttcactacc ttcggcaaca atgattttac
      601 ccagaatacc atcttctacc gcttctagct ccatagtcgc tttatcagtt tcaatctcgg
      661 ccaatacgtc gccggattgt acgacgtcgc cttctttttt gagccatttt gccaacatac
      721 cttcggtcat ggttggcgaa agtgcaggca taagtacctg attagccatt attttttttc
      781 cttcctacgc ttcaaccaag atgtcggtat aaagctcgaa catttctggt tccgggcttt
      841 gctgggcgaa atcggcggca tccgagacaa ttgctttcac gtcagcatcg acttgtttga
      901 gaccgtcatt atcggcggcc ttggcgtcga gaatatattg ccgggcgcgg tcaatgggat
      961 cacgttccga gcgaatttta ctgacctctt cccggctgcg gtacttagcc ggatcagaca
     1021 ttgaatgacc gcggtagcga taggtttgca taccgagaat atacggtccc tttccagaac
     1081 gcgcatggtc gagcgctttt tcacctgcct ctttaaccgc cagcacatcc atgccgtcaa
     1141 cactgactcc aggaatgcc
//
LOCUS       DASCNL010000565         1714 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001169830, whole genome shotgun sequence.
ACCESSION   DASCNL010000565 DASCNL010000000
VERSION     DASCNL010000565.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001169830"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="QF359_07550"
     CDS             complement(<1..277)
                     /locus_tag="QF359_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86799.1"
                     /translation="MKDNSKWFSVSEDSRSWEEFYRKRWNYDYSVRSAHGVNCSMSCS
                     WEVFVKDGLICWELQKTDYPQIDSDIPNVEPRGCQRGVTASWYPYSPL"
     gene            complement(311..754)
                     /locus_tag="QF359_07555"
     CDS             complement(311..754)
                     /locus_tag="QF359_07555"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HJO86800.1"
                     /translation="MSVIWLAPVRQADAAETGQQIFQDICAPCHTIGKGKLVGPDLAG
                     VTARREKNWLRRQIKEPDKLIEEKDPIALQLLKEAEDVEMPPPEISDEGLAAVIAYLK
                     STEQLANVEVGLPSQYMPTMLISLLVLIGLTLIGLIVGKKKVDVR"
     gene            complement(887..1084)
                     /locus_tag="QF359_07560"
     CDS             complement(887..1084)
                     /locus_tag="QF359_07560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86801.1"
                     /translation="MGEKRSFESFVARFWLEGGTDENPFWRGHIRHVQGEEEAYFQDL
                     ERMSDFMEQVSNVPGPQLKRE"
     gene            complement(1379..>1714)
                     /locus_tag="QF359_07565"
     CDS             complement(1379..>1714)
                     /locus_tag="QF359_07565"
                     /inference="COORDINATES: protein motif:HMM:NF015649.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial transcriptional activator
                     domain-containing protein"
                     /protein_id="HJO86802.1"
                     /translation="IYADWCMVKREQLREIYLSMLASMADCHGELGHYAEAAQVCRTA
                     LVCDPGRESFHRALMDHLVHLGRADWAIAEYQKCQKFLDRELGMEPMPETVRLYQHIL
                     EKHGGKQVG"
BASE COUNT          412 a          448 c          384 g          470 t
ORIGIN      
        1 gcaaggggct gtatggatac caagaagcgg ttacgcctcg ctggcaaccc ctgggttcga
       61 cattggggat atcggaatca atttgtggat aatcggtttt ttgcagttcc cagcaaataa
      121 gcccgtcttt tacgaagact tcccagctgc aggacatgga acagttgacg ccgtgagccg
      181 atcgcacact gtagtcatag ttccatcttt ttctgtaaaa ttcctcccac gaacgggaat
      241 cttcgctgac gctaaaccac ttgctgttat ctttcatgat ataccttttg gtttctttgt
      301 tttttcgaga ctatctcacg tccactttct tctttcccac tatgagtcct atcaatgtga
      361 ggccgatcaa cacgagtaaa cttatgagca tggttggcat gtattgagaa ggaagaccga
      421 cctctacatt cgccagctgc tcagtgctct tcaaataggc gattaccgct gccaaacctt
      481 catcgcttat ttcgggtggc ggcatctcca catcttcggc ttccttcaaa agctgcaggg
      541 cgatcgggtc tttttcttca atcagcttat cgggctcttt gatttgcctt cttagccaat
      601 ttttttctcg gcgtgcggtg acgcctgcca aatcaggccc caccaatttt cccttaccga
      661 tggtgtggca aggtgcgcag atatcttgga aaatttgttg gccggtctcc gcggcatcag
      721 cttgcctgac cggcgccaac caaatgacac tcatcaggac cgccaaagcc aaaacccgcc
      781 atcttattga aaacccggta gtcataattg tcttccctct ttgtcgttct tttcggttgt
      841 agaagcggcc aataattatt tccggtgatt atttagtttt ttccacttac tctcttttta
      901 actggggacc gggcacatta ctcacttgct ccatgaaatc gctcattctc tcgaggtctt
      961 gaaaataggc ctcctcttcg ccctgaacgt gacgaatgtg cccccgccag aacggatttt
     1021 catccgtccc gccttccaac cagaaacggg caacaaaaga ttcgaacgaa cgtttttctc
     1081 ccatgcagtt gaccctatcg atcttgccga ttcttactac gggaaattag ctaacacatg
     1141 caggtaacaa gctggttaca ggctggtaac aggctggtaa caaagggaga atagacaggc
     1201 cgtccacggc cgcgatcaca cggattttgc gctaatcttg gtaatggaga ggaaaattta
     1261 gcaatcaagg caaggtatag aaaagaggga ataaactttt aatcgttcaa tttgcacacg
     1321 cccgtggcgc ctcaaaagcg gtgatgaaaa taattcattc cggatgtcgg gcgatcaatt
     1381 atccgacctg tttgccacca tgtttttcga gaatatgttg gtatagacgg acggtttcag
     1441 gcattggttc cataccaagt tcgcgatcta gaaatttctg gcatttttgg tactctgcga
     1501 tggcccaatc ggcgcggccg agatgcacca gatgatccat cagggcacgg tgaaaacttt
     1561 cccggcccgg atcacaaacg agagccgttc ggcatacctg cgccgcttca gcgtaatgac
     1621 cgagttcgcc atgacaatcc gccatgctgg ccagcatact aagataaatc tcccgtagct
     1681 gttcccgttt taccatacac caatcggcat agat
//
LOCUS       DASCNL010000566         3405 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001173436, whole genome shotgun sequence.
ACCESSION   DASCNL010000566 DASCNL010000000
VERSION     DASCNL010000566.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001173436"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="QF359_07570"
     CDS             <1..314
                     /locus_tag="QF359_07570"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HJO86803.1"
                     /translation="LSAMGSQAVLLKGGHREGDEVMDLLIERGNVTDIYRSPRIDTDH
                     THGTGCTLASAIAIGIAQGLSLREAVARGRSYVQEAIRTAPGFGNGHGPLNHAHTVGE
                     F"
     gene            384..1352
                     /locus_tag="QF359_07575"
     CDS             384..1352
                     /locus_tag="QF359_07575"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine dehydratase"
                     /protein_id="HJO86804.1"
                     /translation="MEKITHDELKAAQEIIYRHLKPTPEISWPLLSVRCGCEVWVKHE
                     NHTPIGAFKVRGGLNYMDRLSREQPDINGIISATRGNHGQSLAFAASRYGITATILVP
                     FGNNPEKNDAMRALGAELIKYGEDFQEAREYAEVLSGEKNLHMIGPFHPWLLQGVGTY
                     ALEFFTACSDLDVVYVPIGMGSGMCGMISARDMLGLKTKISGVVAENAARYALSFAQK
                     KVISTNTADTMADGIACRIPDENALAIILDGADDVMKVSEDEIKAAMRYYYVDTHNLT
                     EGAAAAPLAALMKQKDIRQGKKVGLVNSGGNVDAETFQDVMVGGQK"
     gene            1478..1834
                     /locus_tag="QF359_07580"
     CDS             1478..1834
                     /locus_tag="QF359_07580"
                     /inference="COORDINATES: protein motif:HMM:NF025054.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJO86805.1"
                     /translation="MPGKYAEPEGQILLAWANGGGEEKLAGIVAMRPLEDDGICELKR
                     LYLRDEFRGQGAGRQLTEDIIYFAQKAGYEKMRLDTERRLQTAIDMYRKFGFVEIGQY
                     YDNPMAQILYMEKQLN"
     gene            1850..2908
                     /locus_tag="QF359_07585"
     CDS             1850..2908
                     /locus_tag="QF359_07585"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HJO86806.1"
                     /translation="MSSYKIATIPGDGIGKEVIPEGIRMLDAAGRKHDIKFAWDMFDW
                     SCETYKETGQMMPDDGIDQTREHDAIYLGAVGFPGVPDHVSLWGLLIPYRREYHQYVN
                     LRPVRLFDGVPCPLANRKPGDIDFYVVRENVEGEYSEIGGRLYGGTDDEMVTQQTVFT
                     RRGVDRILKYAFDLAATRPKKHLTSATKSNGIIHTMPYWDERVAAMQQSYPDIEVDKF
                     HIDILTAHFVRNPDWFDVVVGSNLFGDILSDLGPAVTGTIGIAPSGNINPERDFPSMF
                     EPVHGSAPDIAGQGIANPIGQIWSGAMMLDHFGETEAAANIISAIETVLADGSCMTPD
                     MGGAANTQDLGKAIESAL"
     gene            3036..>3405
                     /locus_tag="QF359_07590"
     CDS             3036..>3405
                     /locus_tag="QF359_07590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HJO86807.1"
                     /translation="MHATAAFDPPNFEMWVTFALILGALALYAVETIAVEVTSLAVLS
                     AFILFFHLYPILDAEAHNLLSSDRLIAGFANPALMTVLALLVIGQGMVRAGVLDRGAR
                     IVLAAGAGQSWLTILITLVVV"
BASE COUNT          807 a          782 c          941 g          875 t
ORIGIN      
        1 ccttatcggc gatgggatct caggcggtgc tgctcaaggg cggccaccgt gagggtgatg
       61 aggtgatgga tttactgata gagcgtggca acgttacaga tatttaccgc agcccacgca
      121 ttgatactga ccatactcat ggtaccggct gtacgttggc gtccgccatt gccattggta
      181 tcgctcaagg tttaagtctc cgggaagctg tggcgcgtgg ccgcagctat gtccaggagg
      241 caatccggac cgcgcctgga tttggcaatg gtcatggacc gcttaatcat gcccatacgg
      301 tgggtgagtt ttagtttttt caagattgtc ccctgacaat atagtctatt gaccttaatc
      361 tccggattgg ggaacctaat atcatggaaa aaataacaca cgatgagctt aaagctgccc
      421 aggaaatcat ctaccggcat ttgaagccga cgccggaaat ttcgtggcca ttgctatctg
      481 tgcgttgtgg ctgtgaggtt tgggtcaaac atgaaaacca cacgccaatt ggtgcgttca
      541 aggtccgggg cgggctgaat tatatggatc gcttaagccg cgagcagccc gacatcaacg
      601 gtattatctc ggcgacccga ggcaatcatg gtcaaagctt ggccttcgct gcgtcgcgct
      661 atggcattac tgcgactatt ctcgtgccct ttggtaataa cccggaaaag aacgatgcca
      721 tgcgggcgct cggtgcagaa ttgattaagt atggtgaaga ttttcaggaa gctcgtgaat
      781 acgctgaagt attgagtgga gagaagaatc tccatatgat tggtccgttt catccctggt
      841 tgctgcaggg ggttggcacc tacgccttgg aattttttac tgcttgtagt gacttagatg
      901 tagtctatgt accgattggg atgggttccg gtatgtgtgg tatgatttcg gcccgggaca
      961 tgcttggcct taagactaag attagtggcg tcgtggctga aaatgccgcc cgttatgcac
     1021 tgtcctttgc acaaaaaaaa gtgatttcga ctaacacagc cgacaccatg gcggatggaa
     1081 ttgcttgccg gatacccgat gaaaacgcgc tggcgatcat cttggatggt gctgacgatg
     1141 ttatgaaagt gtcagaggat gaaattaagg ccgcaatgcg ctattattac gtagataccc
     1201 ataatctgac agaaggagcc gccgcagcgc ccttggcggc tctgatgaaa cagaaagata
     1261 tccgccaggg aaaaaaagtt ggcctggtca attctggtgg taatgtagat gccgaaacat
     1321 tccaagatgt aatggttgga ggtcaaaagt gagtattgat attcgtccgg cccgcgtgcc
     1381 cgaagatatt gaaactgttc gccagatgtt cattgagtat caggaatggc tgcaggtcga
     1441 tttgtgattt cagggcttcg atgaagagct ggcaagtttg cctggcaaat atgctgaacc
     1501 tgaaggacaa atcctgcttg cctgggccaa tggtggcggt gaagaaaaac ttgctgggat
     1561 tgttgccatg cgccccttgg aggatgacgg catttgtgaa ttaaagcggc tttacttgag
     1621 ggatgaattt agagggcagg gcgccggtcg ccagctgacc gaggacatta tttatttcgc
     1681 tcaaaaggcc ggctacgaaa aaatgcggct agatactgag cgacgcctgc aaacggctat
     1741 cgacatgtac cgaaaatttg ggtttgttga aattggtcaa tactacgata atccgatggc
     1801 gcaaatactg tatatggaaa aacaactcaa ctagggaaaa ccccgtcaca tgagctccta
     1861 taagattgcc acaattccgg gcgacggaat tggcaaagaa gtcatccctg aaggtatccg
     1921 gatgctggat gcagcaggcc gtaagcacga tattaaattt gcctgggata tgtttgattg
     1981 gagttgcgaa acctataagg aaaccggcca aatgatgccg gatgacggta ttgatcaaac
     2041 ccgggagcat gatgcgattt atctcggtgc cgtcggtttc ccgggcgtgc cggatcatgt
     2101 ctcgctctgg ggcttgctga tcccataccg gcgcgaatac caccaatatg tcaatctccg
     2161 cccggtgcgt ctgtttgacg gtgtgccgtg cccgctcgcc aaccgtaagc caggtgacat
     2221 tgatttctat gtcgtccgtg aaaacgtcga aggtgaatat tccgagattg gcggccggct
     2281 ttatggcggc accgatgatg agatggttac ccagcaaact gtcttcaccc ggcgcggtgt
     2341 tgaccgcatt ctaaaatatg cctttgatct ggccgcgacg cggcctaaaa aacacctgac
     2401 atcggcaact aaatccaatg gtatcatcca caccatgcct tattgggacg agcgcgttgc
     2461 ggcaatgcag cagagctacc cagacatcga agtcgataaa tttcacatcg atattctgac
     2521 cgcgcatttt gtccgcaacc cggattggtt tgacgtcgtt gtcggctcta acttgtttgg
     2581 cgatatatta tctgatttag gcccagcggt gaccggcacc atcggcattg cgccttccgg
     2641 caatatcaat ccagagcggg attttccgtc aatgtttgaa ccggtacatg gctcggcgcc
     2701 tgatattgcc ggccagggta ttgccaatcc aattggccag atttggtcag gggcgatgat
     2761 gctcgatcat tttggtgaaa ccgaagctgc cgctaacatt atctcagcta ttgaaaccgt
     2821 gctcgcggat ggctcctgca tgacgccgga tatgggaggt gcggcaaata cccaggacct
     2881 cggtaaagcc atcgaaagcg ctctttaagt tcttaaggac tacccggtat tttgggctat
     2941 ttcggtgatc agcgaaatag cgtctcagca ttggttgacc ttccggccaa ctcccgtaac
     3001 attagagata atcaactaat attaagtgaa tagtgatgca cgcgacggca gcttttgatc
     3061 cacctaattt cgagatgtgg gtgacttttg cgctaatttt aggggcgtta gcactttatg
     3121 ctgttgaaac cattgcggtt gaggttacgt cgttagcggt acttagcgcg tttatactgt
     3181 tttttcactt atatccaatc ctcgatgcag aagcccataa tctattatct tcagaccgct
     3241 tgatcgccgg tttcgctaat cccgcgctga tgactgtgtt ggcgctattg gtgattggtc
     3301 agggaatggt gcgggcagga gttctggacc gtggtgcgcg cattgtcctg gcggcgggtg
     3361 ctgggcagag ctggctgacc atcctgatca cgcttgttgt ggtgc
//
LOCUS       DASCNL010000567         1768 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001174433, whole genome shotgun sequence.
ACCESSION   DASCNL010000567 DASCNL010000000
VERSION     DASCNL010000567.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001174433"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1768
                     /locus_tag="QF359_07595"
     CDS             <1..>1768
                     /locus_tag="QF359_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008622238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HJO86808.1"
                     /translation="LRIWRDEKEHVLIFKDGEIDEKMEVIGDADGKTGTEVTFFASDK
                     TFTNIEYDFATIEHRLRELAFLNSGVRIKLTDARHVEPTIVELFYEGGLEAFVTYLDR
                     SKTTLSPTITVMGEKDGITIEAALQWNDSYHETTLCFTNNIPQKDGGTHMAGFRGALT
                     RTINTYAEQEGLAKKAKVTISGDDAREGITCVLSVKVPDPKFSSQTKEKLVSSEVRPV
                     VESILGEKLNQWFEEHPTDAKRIIGKITEAAAAREAARKARELTRRKGALDISSLPGK
                     LADCQSKDPALSEIFIVEGDSAGGSAKQGRDRAHQAILPLRGKILNVERARFDKMLAS
                     VEIGTLITALGTGIGPEDFDAEKARYHKIIIMTDADVDGSHIRTLLLTFFYRQMSELI
                     EKGFLYIAQPPLYRAKHGKSEVYLKDDQALEDYLIEAGIEECVLNLADDSQIAGQDLK
                     ALIGFCRVVKGQIAGLTTRVPTKIVEQAAIAGALNPEILSNSEQADQAANYIATRLDA
                     LETVAEKGWQGETIADGGLSFVRVLRGVPDGPHVIDGAVIRSVEARALDANSAKLQES
                     FQHHSKLVLSDKEFDITGPITLF"
BASE COUNT          466 a          449 c          456 g          397 t
ORIGIN      
        1 ttgcgtattt ggcgcgatga aaaagaacac gtcctgatct tcaaagatgg tgaaatcgat
       61 gaaaaaatgg aagtgattgg ggatgcggac ggcaaaactg gcacggaagt aacttttttt
      121 gcttctgaca agacctttac caatatcgaa tatgactttg ccaccattga acatcgactc
      181 cgcgaactgg cgtttttgaa ctccggtgta cggattaaac ttaccgatgc ccgccatgtc
      241 gagccgacca ttgtcgaact attctacgaa ggcggcttgg aggcatttgt tacctacctg
      301 gatcgctcaa aaacaacctt atccccgacc atcacagtga tgggcgaaaa agatggcatc
      361 accattgaag cagccctgca atggaacgac agttaccacg aaacgacgct gtgcttcacc
      421 aacaacattc cgcaaaagga cggtggtaca catatggccg ggtttcgagg ggcgctgacc
      481 aggaccatca atacctatgc cgagcaggaa ggtctggcca aaaaagctaa agtaaccatt
      541 tccggcgacg atgcccgcga aggcatcact tgtgtgctgt cggtcaaagt gcctgacccg
      601 aagttttcat cacaaaccaa agaaaagctg gtgtcctctg aggtacgccc ggtggttgag
      661 agtattttgg gcgagaagct taatcaatgg tttgaagaac atcccaccga cgccaagcgg
      721 attatcggca aaattaccga ggctgccgcc gcccgcgaag cagcccgcaa ggcccgtgag
      781 ctaacccgcc gcaaaggtgc gcttgatatc tcatccctac ccggaaagct tgccgattgc
      841 cagtcaaaag acccggcact cagcgaaata tttatagtcg agggtgattc agccggcggt
      901 tcagccaaac agggccgcga tcgggcccac caggcaattc tgcccctgcg cggtaaaatt
      961 cttaacgttg aacgtgcgcg ttttgataaa atgctggctt cagtcgaaat cggcaccctt
     1021 atcacggctc ttggaaccgg tattgggccg gaggattttg atgccgaaaa agctcgctat
     1081 cacaaaatta ttatcatgac cgatgccgat gtcgatggca gccatatccg cacgcttttg
     1141 ctaaccttct tctaccggca aatgtcggaa ctgattgaaa aaggctttct atatattgct
     1201 caacctcccc tttatcgggc aaaacacggc aaatcagagg tttatctcaa agacgaccaa
     1261 gcgctcgagg attatctgat tgaagccggg attgaggaat gtgtattaaa tcttgctgac
     1321 gacagtcaga tcgccggtca ggacctcaaa gcattgatcg gcttttgccg ggttgtaaaa
     1381 ggtcagattg ccggactaac cacccgggtg ccaaccaaga ttgtcgaaca ggcggccatt
     1441 gccggggcgc tcaatccgga aattttgtcc aactccgaac aagccgatca ggcggcgaat
     1501 tatattgcga cccgtttgga tgcgctcgaa acggtggcag aaaaaggctg gcaaggggaa
     1561 accatagccg atggcgggtt gtcttttgtt cgtgtgctgc gcggcgtacc ggacggccct
     1621 cacgtcattg atggcgcggt aatccgcagt gttgaggccc gcgcgcttga tgccaatagt
     1681 gcaaaattgc aggaatcctt tcagcaccac agcaaattag tcttaagtga caaggaattt
     1741 gatatcaccg gcccgattac tttgtttg
//
LOCUS       DASCNL010000568         1347 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001176607, whole genome shotgun sequence.
ACCESSION   DASCNL010000568 DASCNL010000000
VERSION     DASCNL010000568.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001176607"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            4..>1347
                     /locus_tag="QF359_07600"
     CDS             4..>1347
                     /locus_tag="QF359_07600"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO86809.1"
                     /translation="MHWGDMGGPMPGTFNPEATTCYAEGIRIPPIRLFKNNELDEELF
                     SLIEINIRGAIERRADMKAQFEAARLIDRRVVELCEKYGVETLFQAFEEQFNYSERMM
                     LTELESLPDGEWEFEDFGDQDVMAEGKPPIRVHCKLTKVGSKLSFDWTDSDPQPKASW
                     GGSRATLIGGNYLGFMICFPQLFPLNHGIIRNLEIVSKPGTCVDVVFPAPTTGYCSGA
                     FDKIEAVTIACLAGVMAKDQPWRVYPAAVSLTNLCMGGYNPRTKKDFIQYTWAVGGEN
                     ARTFKDGKSLIFMRFCNARTIPQELEERWFPVIFDRYEARPDSCGHGFRRGGFGLIRE
                     LVIQTDIVMTIHGDREIHTPFGISGGLNGGGSTLIINKGTKDEFDAGMYATGVKLKKG
                     DKIFYGSSGGGGFGDPLDREWELVLDDVIDEWLTIEAAEKYYGVVIEEIDAEAADY"
BASE COUNT          309 a          326 c          375 g          337 t
ORIGIN      
        1 gttattcact ggggggatat gggtggcccc atgccgggca ccttcaatcc ggaagcaaca
       61 acctgctatg cggagggtat acgcattcca ccgatccgtt tgtttaaaaa caacgagctg
      121 gatgaagaat tattcagcct gatcgagatc aacattaggg gcgccatcga gcgccgggcc
      181 gatatgaagg cgcaattcga agccgcccgc ttgatcgacc gccgggttgt tgagctctgt
      241 gaaaaatacg gtgtggaaac ccttttccaa gcctttgagg aacaattcaa ctactccgaa
      301 cggatgatgt tgacggaact ggaatctcta cccgatggtg aatgggagtt tgaagatttc
      361 ggcgatcagg atgttatggc cgaaggcaaa ccaccgatca gagttcattg taaactgact
      421 aaggtcggct ctaagctatc tttcgactgg accgattccg atcctcagcc aaaagcctct
      481 tggggtggca gccgggcgac tttgatcggc ggcaactatc tcggtttcat gatttgcttc
      541 ccgcaattgt tcccgctcaa tcatggtatc atccgcaatc tggaaatcgt ctccaaaccg
      601 ggcacctgcg tcgatgtggt ttttccggcg ccgacgaccg gctattgctc cggtgcgttc
      661 gataaaatcg aagccgttac catcgcctgc ctggcgggcg tgatggctaa ggatcagccg
      721 tggcgggtgt accctgccgc agttagcctg actaatctat gtatgggcgg ctacaacccc
      781 cggaccaaaa aagacttcat tcaatatact tgggcggttg gcggtgaaaa cgcccgcacc
      841 tttaaagacg gtaagtcttt gatctttatg cggttctgta atgcgcgaac cattccgcaa
      901 gagcttgaag aacgctggtt tccagtcatc ttcgaccgct atgaagctcg gcctgacagt
      961 tgcgggcatg gtttccggcg tggtggattt ggtttgatcc gtgaattggt gatccaaact
     1021 gacatcgtta tgactattca cggcgatcgc gagattcata cgccgtttgg tatctccggc
     1081 ggcctcaatg gcggcggctc gaccttgatt atcaataaag gcaccaaaga tgagtttgat
     1141 gccggcatgt atgcgaccgg tgtgaaactc aagaaaggcg ataaaatctt ttatggctct
     1201 tccggtggcg gtggctttgg tgatcctttg gaccgtgaat gggaacttgt tttggatgac
     1261 gtcatcgacg aatggctaac catcgaggct gccgagaaat attatggcgt ggttatcgag
     1321 gagatcgatg ctgaagcggc tgattac
//
LOCUS       DASCNL010000569         1705 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001180574, whole genome shotgun sequence.
ACCESSION   DASCNL010000569 DASCNL010000000
VERSION     DASCNL010000569.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001180574"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="QF359_07605"
     CDS             complement(<1..278)
                     /locus_tag="QF359_07605"
                     /inference="COORDINATES: protein motif:HMM:NF013646.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HJO86810.1"
                     /translation="MSDEYKVLIVGGGIAGQALAISLARGGIACEIVEIKPDFEILGA
                     GTALLGPAMRALEEIGVADEVRSAGWSHEDVKFRYRDAHGDVVVETAV"
     gene            complement(513..1208)
                     /locus_tag="QF359_07610"
     CDS             complement(513..1208)
                     /locus_tag="QF359_07610"
                     /inference="COORDINATES: protein motif:HMM:NF037007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJO86811.1"
                     /translation="MSKPQKRTAKPKTRRRGQGRPAGSANGVGEDALIGAARKLMNNK
                     PPAELTRLEVAESAGVDPALIRYYFKDMDGLLVAVLKQMLVESSVVIQSSKEIRGTPE
                     EKLRRRIETFIDFGAANPGSHDLFVRYIIYGEIKWAAEKRCEITKAGFADLKTLVDEG
                     RAEGLFRDDFDERFLYILFFAASSFFFRTAGPIFPQLFDAKASPRKLAKPYSAFMTDI
                     LLTGIEQKGRTKP"
     gene            complement(1519..>1705)
                     /locus_tag="QF359_07615"
     CDS             complement(1519..>1705)
                     /locus_tag="QF359_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015074505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86812.1"
                     /translation="TLICEGLHGRIIEVTPEGEIVWEFVSPWFIKTPRGPDSSIFRAY
                     RYTVNSPEIAGRVSYPE"
BASE COUNT          457 a          476 c          349 g          423 t
ORIGIN      
        1 tcaacggcag tttccacgac gacatcccca tgggcgtccc ggtatcggaa tttgacatcc
       61 tcatgagacc atcccgcgct acgaacctca tcggcaacac cgatttcctc aagcgcccgc
      121 atggcggggc ctagcaaagc tgtacccgcg cccaggatct caaagtccgg cttgatttca
      181 acaatctcgc aggcaatgcc accccttgct agagatatcg caagcgcctg gccggcaatg
      241 ccgcccccga caatcaaaac tttgtattca tctgacatat caacttactc cctatctagg
      301 ttcaccatca ccacggtaaa ccggacacca gcagcaaata gaagcaccat cactaaacca
      361 cgatagctgg ttttagccgc tcttatccga aacagccctt ctgctccagt ttattctttc
      421 aaaaagaatt atattccttt cgccgaaaaa gatcaattat taaattgctg tcagtcagat
      481 ttgttcgaat tcttaaacaa taacgccgaa catcagggtt tggtacgccc tttctgctcg
      541 attccagtaa gcaaaatgtc ggtcataaag gcactatagg gctttgccag tttgcgtggg
      601 ctggccttag cgtcgaagag ttggggaaat atagggcctg ctgtcctgaa aaagaaactt
      661 gatgctgcaa agaacaggat atagagaaac cgttcgtcaa aatcgtcgcg aaacagccct
      721 tcagcccgcc cttcatccac aagtgttttc agatcggcga aaccagcctt ggtgatttcg
      781 caccgctttt ccgccgccca cttgatttcg ccataaatga tgtatcgaac aaacaggtcg
      841 tgggatcctg gattagccgc accaaagtcg ataaatgtct cgatccggcg acgcaatttt
      901 tcttcaggag tccctcgtat ttccttgctc gactgtataa ccaccgagct ttcaacaagc
      961 atctgtttca acacggcaac cagaagccca tccatgtcct tgaaataata tcggatcaaa
     1021 gcaggatcga caccggccga ttcagcaact tcaagccgtg tcagctcagc gggcggtttg
     1081 ttgttcatca gctttcgcgc cgcaccgatc aatgcgtctt cgccgacacc atttgcgctt
     1141 cccgccgggc gaccctggcc tcgacgacga gtttttggtt tagcggttcg cttttgaggt
     1201 ttgctcacgg cttgaaaatc ttgttattgg ctcctgaaac aatcgtatag gacaacccga
     1261 tatagaacaa cctagctaag atatgctacc aacatcaaaa gaataaataa ttacacataa
     1321 tcgtgaatgt tttgtagtgc ttcaatttct aaatcaattc gtatcaattg cacctgtatc
     1381 tctaacctgc atcaacaggc cggccacatg actgcacccg accaatttgc agaaacgtca
     1441 aattaatcct tgccaaaagg gagtcgtcca cacatgaccc ttaacggaca ttggccttac
     1501 actagctatt gatgccgatc actcaggata ggatacccgg ccggcaattt ccggcgaatt
     1561 tacggtatag cgataagctc gaaagatact actatctggt ccacgcggtg tttttatgaa
     1621 ccacggacta acaaactccc agacaatttc tccctctggc gttacttcaa taatccgacc
     1681 atgcaagcct tcgcagatca gcgta
//
LOCUS       DASCNL010000570         1885 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001181928, whole genome shotgun sequence.
ACCESSION   DASCNL010000570 DASCNL010000000
VERSION     DASCNL010000570.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001181928"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="QF359_07620"
     CDS             <1..401
                     /locus_tag="QF359_07620"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HJO86813.1"
                     /translation="ERLPMLVTSVGRAYLSFCPEPERLEILESLQRSVDEFDQLANNK
                     TYIQNIIKTTRERGYGKRDDGFHTTRKTSSIAVPIMNENRVVATLAITFISSAATPEN
                     IAERHLKALKSAAHKIEFEVKKIKKWETVQ"
     gene            complement(450..1316)
                     /locus_tag="QF359_07625"
     CDS             complement(450..1316)
                     /locus_tag="QF359_07625"
                     /inference="COORDINATES: protein motif:HMM:NF012705.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HJO86814.1"
                     /translation="MASTLSYMAIEARRQDRDRFLCALFAPEETREGLYTLLAFNAEI
                     AKSRETVGEPLLGEIRLQWWREALELIYGDPNGVLDDHVVLAELAKVSQHYNLSRENL
                     EQMIDARSQDMLDEPPQDEVELRDYAVGTTATLNAALLKILSPAGSDVPSTIWEASEH
                     VSVAWAKTGLLRAAASLAGYQRVMIPQVVMQNYGFDKYVFFNGQPNPEIKQATKHLIE
                     LARAEINRARALTGGKVDKRYLPVFLQASLAELYLKRIERLDCNTFSPEIEDGRALRQ
                     IKLTLKALRGSF"
     gene            1379..>1885
                     /locus_tag="QF359_07630"
     CDS             1379..>1885
                     /locus_tag="QF359_07630"
                     /inference="COORDINATES: protein motif:HMM:NF024842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HJO86815.1"
                     /translation="MENFQSKSGKVYIVGAGIAGLSAAVACVKKGHNVSLFEAARHAG
                     GRCRSFEDSVLERVIDNGNHLILSGNYNIKQYLKGINATGNFEPVDPVRFEFVDLDAD
                     ISWSLTPSAGRFPWWILLPSKRIPGTSLGDYLALSKLKSADDETVANLIDPTQPIFER
                     FWQPLCRAV"
BASE COUNT          480 a          490 c          450 g          465 t
ORIGIN      
        1 gtgagcgcct gccaatgcta gttacatctg tgggccgtgc ctatttgagt ttctgtccgg
       61 agcccgagcg gctggaaata ttggaaagcc tgcagcgctc ggtcgatgaa tttgaccaat
      121 tggcgaacaa taaaacctat attcagaaca ttattaagac aacgcgtgag cgcggctacg
      181 gcaagcgtga cgacggattt cacacaaccc gcaaaacttc cagcattgcc gttccgatca
      241 tgaatgaaaa ccgtgtcgtc gcgacacttg ccatcacttt tatttcttct gctgcaacgc
      301 cggaaaatat agctgagcgc cacttaaaag cactaaaatc agccgcccat aagatcgaat
      361 ttgaagtaaa gaagatcaaa aaatgggaaa cagtgcagtg atttctcatc tcaacctact
      421 ttaagcatat agtaattttg cagccctcac tagaacgatc cgcgtagagc cttaagcgtt
      481 aatttgatct gacgcagcgc tcgtccatcc tctatctcgg gactaaaggt attacaatcc
      541 agcctttcaa tgcgcttgag ataaagctcg gctaaggacg cctgtaaaaa tacaggcaga
      601 tagcgcttat ctactttgcc gcctgttagt gcgcgagccc ggttaatctc ggcgcgtgcc
      661 aactcgatca aatgtttggt ggcctgctta atttcaggat tcggctgtcc attgaaaaac
      721 acatacttat caaaaccata attttgcatc accacctgcg ggatcatgac ccgctggtag
      781 cccgccagcg acgctgctgc ccgcaacaac cccgtcttcg cccaggcaac actaacatgt
      841 tccgatgctt cccagattgt tgacggcacg tcacttccag ccggtgataa tattttcaat
      901 aaggccgcat tgagggttgc cgtcgtgcca accgcgtagt ctcgcagttc gacttcatcc
      961 tgcggcggct cgtcaagcat atcctgcgac cgcgcatcga tcatctgctc caaattttcg
     1021 cggctcagat tgtagtgctg actgaccttt gcgagctcag ccaatacaac atgatcatct
     1081 aatacaccat tcggatcgcc gtaaatgagc tcaagggctt cccgccacca ttgtaaacgg
     1141 atttctccga gcaaaggctc acctactgtt tcgcgggact tggcgatctc ggcattaaaa
     1201 gccaatagtg tgtagagccc ctcccgggtc tcttcggggg caaaaagcgc acatagaaag
     1261 cggtcccgat cctgcctgcg ggcttcgatt gccatatatg aaagtgtact agccatttgg
     1321 atatgtcata tagtattcca atagggagac caagggactg aatataggcg gctaagtggt
     1381 ggaaaacttt caatcaaaaa gcggtaaggt ttacattgtc ggcgcaggta tagccggtct
     1441 gtcggcggct gtagcctgtg ttaaaaaagg ccataacgtc agtctgtttg aagctgccag
     1501 gcatgctggt ggacgttgcc gatcctttga ggacagcgtg cttgagaggg ttatcgataa
     1561 cggcaatcat ctgattcttt ccggcaatta taacatcaag caatatctta aaggcatcaa
     1621 tgcgaccggt aattttgaac cggtcgaccc agttcgtttt gaattcgttg atttggatgc
     1681 agatatcagt tggtcgctga cgccaagtgc aggccgcttt ccctggtgga tattgctgcc
     1741 aagcaaacgt attcccggca ccagcctcgg cgactatctc gcgttatcaa agctgaaatc
     1801 ggccgacgac gaaactgtgg cgaacctcat tgaccccaca cagccaatct tcgaacggtt
     1861 ttggcaacca ttgtgccggg cagtg
//
LOCUS       DASCNL010000571         3682 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001182285, whole genome shotgun sequence.
ACCESSION   DASCNL010000571 DASCNL010000000
VERSION     DASCNL010000571.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3682)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3682)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001182285"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /locus_tag="QF359_07635"
     CDS             complement(<1..307)
                     /locus_tag="QF359_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflK N-terminal
                     domain-containing protein"
                     /protein_id="HJO86816.1"
                     /translation="MTWYTQRGGPWGGSGGGGGQGPWGGGGGPSGQQPPDIEEMLRRS
                     QDKFKRFIPSGGGGARRIVLLVLAAIVIWLGTGFYRVQPSEQGVELLFGKFVQMTTPG
                     "
     gene            497..1597
                     /locus_tag="QF359_07640"
     CDS             497..1597
                     /locus_tag="QF359_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140663 - ATP-dependent FeS chaperone
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HJO86817.1"
                     /translation="MAEITAEQVLEALKQVKDPDKGENIVELGMISGLQLKDGHVAFG
                     IEVDPERGPMLEPLRKEAEKTVHDLLGVLTVTAVLTAEREAAPEQTALPGPPPGGPGG
                     PPGSQQSAAFQKMDLLGIDSVVAVASGKGGVGKSTTAVNLALAMAADGKRLGLLDADI
                     YGPSIPRMLGITNQPEQTASGMIAPLENHGIKCMSIGFLIEEGTAMIWRGPMATGALE
                     QLITDVAWGELDCLVIDLPPGTGDIHLTLAQRVPLSGAIIVSTPQDIALADARKGLNM
                     FEKVDVPVFGLIENMSYFSCPHCGERTDIFSHGGARKEAEKLGMDFLGEIPLDIVIRE
                     TSDGGQPIVVSDPDSEHSKSYLEIAENIWAKI"
     gene            complement(1679..2617)
                     /gene="thyX"
                     /locus_tag="QF359_07645"
     CDS             complement(1679..2617)
                     /gene="thyX"
                     /locus_tag="QF359_07645"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HJO86818.1"
                     /translation="MELTAQQKQDIEAARSALSETRRATVPALEEVLYELIPVLDRGF
                     VRVIDYMGDDAAIVQAARVSYGKGTKKVSDDAGLINYLLRHRHTTPFEMCEIKYHIKV
                     PIFIARQWIRHRTANVNEYSARYSVLDREFYIPSADQLASQSTQNHQGRGDLLEGEEA
                     RRVLEILKEDATRNYDHYIEMLNENEEGNIIDESKSGLARELARMNLTLNMYTQWYWK
                     IDLHNLLHFLSLRADAHAQYEIRVYADVMLETVKRWVPIVHNAFMQYRVGGVGLSAAA
                     LAVVKKLLAGESVSQEDSGMSKREWRELMATLEQDV"
     gene            2751..3103
                     /gene="ssrA"
                     /locus_tag="QF359_07650"
     tmRNA           2751..3103
                     /gene="ssrA"
                     /locus_tag="QF359_07650"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
     gene            3190..>3682
                     /locus_tag="QF359_07655"
     CDS             3190..>3682
                     /locus_tag="QF359_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HJO86819.1"
                     /translation="MSEETFPYDQWVNEALRSVLSRALKQLAENGPTGDHHFFINFNT
                     THDGVEIPGFLRAQYPEEITIVLQHQFENLIIEDQGFEVTLSFSGKKSRLCVPFDAVT
                     SFADPLVNFGLQIGVKAVNEAMLQVQEEIDDDVTDHIQDDLTDDMAGNQQISEAKSPT
                     PFNP"
BASE COUNT          932 a          952 c          915 g          883 t
ORIGIN      
        1 gacccggtgt cgtcatttga acaaatttac caaacagcaa ttcgacacct tgttcactgg
       61 gctgcacccg gtaaaaacca gtacccagcc agatcacgat cgcggccaag accaataata
      121 cgattcggcg tgcgccgccg ccaccactcg gtataaagcg tttaaactta tcctggctgc
      181 gccgcagcat ctcttcaatg tctggtggtt gctgaccgga tgggccgcca ccgccgcccc
      241 aaggaccttg tccgccaccg ccacctgatc cgccccaagg gcctccgcgt tgggtatacc
      301 acgtcatagc ttttttcctt atctagtaaa attctgacaa ataataaaac cggaaaatat
      361 agattttcac cgtttgcaaa ttctttccct gccttatatg acagctttac catccttgca
      421 acggagtctc acgtttgatt taccatctcg ggcatagatt cagtcacttt aaagttaacc
      481 attaggagac ttagatatgg cggagatcac cgctgagcaa gtccttgaag ccttaaaaca
      541 ggtaaaagat cccgataaag gggaaaatat cgttgaattg ggcatgattt cggggcttca
      601 acttaaagat ggccatgttg cctttggtat tgaagttgac ccggagcgtg ggccgatgct
      661 tgaaccgttg cgtaaagaag ccgaaaagac ggtccatgac cttttaggcg tgcttaccgt
      721 aaccgcggta ttaaccgcag agcgggaagc ggctcccgaa caaacagctc ttcccggccc
      781 gccgccgggt ggccctggtg gtcctcctgg cagtcagcaa tcggcggcat ttcagaaaat
      841 ggatttgctg ggtatcgatt ccgtcgtcgc tgtcgcctct ggtaaaggcg gtgttggtaa
      901 atcgaccacg gcggtaaatt tggcccttgc catggcagcg gacggcaaac ggttaggcct
      961 gctggatgct gacatttacg gcccgtcgat cccgcgtatg ctgggtatca ccaaccagcc
     1021 tgaacaaacc gccagcggta tgattgcgcc cctagaaaat cacggcatta aatgtatgtc
     1081 gatcgggttt ttaatcgaag agggaactgc catgatttgg cggggaccta tggcaaccgg
     1141 cgcgcttgag caattgatca ccgatgttgc ttggggtgag ctggattgtc tggtgatcga
     1201 tttgccgcca ggcaccggcg acattcatct aaccttggcc caacgggtgc cactctccgg
     1261 tgcgatcatt gtatcaacgc cacaggatat tgccctcgcc gatgcccgca aagggctcaa
     1321 catgtttgaa aaagttgacg tcccagtgtt tgggctgatt gaaaacatga gctatttctc
     1381 ctgcccccat tgtggtgagc gcacggacat attcagccat ggcggcgcgc gcaaagaagc
     1441 tgaaaaactc ggcatggatt tcctcggcga aattccgttg gatatcgtta tccgggagac
     1501 ctccgatggc ggccagccta tcgtcgtctc cgatccagac agcgaacatt cgaagagcta
     1561 tctcgagatc gcggagaata tctgggcaaa gatttaaaac ttactccctc tcctccacta
     1621 attaaaattg aggagcggga aaagaatttc ttatgcggtg atctaagacg cctttaacct
     1681 acacgtcctg ctccagggtt gccatgagct cgcgccattc gcgtttgctc atgccactgt
     1741 cttcctgaga gacgctttca ccggcgagca attttttaac caccgcaagg gccgctgcag
     1801 ataagccaac gccgccaacc cggtattgca taaaggcatt atgcacaatc ggcacccagc
     1861 gcttgacggt ttccagcatg acgtcggcat aaacgcggat ttcatactga gcgtgggcgt
     1921 ctgcccgcaa agacagaaaa tgcagcagat tatgaagatc aattttccaa taccattggg
     1981 tatacatatt gagagttaag ttcatccggg ccaattcccg ggccagaccg ctcttgctct
     2041 catcaataat attgccctct tcgttttcat tgagcatctc gatgtagtga tcatagttgc
     2101 gggtggcatc ttcttttaag atttccagca cccgccgggc ttcctcgcct tcaagcaaat
     2161 caccccggcc ttgatgattt tgggttgatt gactggcgag ctggtcagcg cttggaatat
     2221 aaaactcgcg gtcgagcact gaatagcggg cggaatattc gttgacatta gcggtacggt
     2281 gcctgatcca ttggcgggca ataaagatcg gcaccttgat gtggtacttg atctcgcaca
     2341 tctcaaacgg tgtggtgtgg cgatggcgca gcaggtaatt tatcaggccg gcatcatcgg
     2401 aaactttctt ggtgcccttg ccgtaggaca ctcgtgccgc ctgcacgatt gccgcgtcgt
     2461 cgcccatgta atcaataacc cggacaaaac cacgatccaa aaccgggatc agctcgtata
     2521 agacttcttc aagcgctggc accgtcgccc ggcgagtttc agaaagtgct gatcgggcgg
     2581 cttcaatatc ttgtttttgt tgggcagtaa gttccatcgg cgggtaatcc taatactacg
     2641 tacgaaagtg atattcgcct gcactttacc tgcttgcgcg taacggatca aagatttgaa
     2701 tctaggcatt aacatattga cattcgtcat caccaaaacg cctcaacagc accctttcaa
     2761 tagactaccg ataggactat attaggtgtg ccggtttacc ggctatggca ataaacgttt
     2821 tgtagaataa gcgtaacgga cccgggggca gtgcccggcg cctccaccat aaattcccgg
     2881 caatccaggg ggttagatat aaatttcctg gagcttatcg gaccgatatg ggggcgaaac
     2941 aggatcgacg tgcgtagtaa aaacaaagtt tttgcccggc attgtaccac cgttatcggg
     3001 ctaactttac aaatgctaac gataatgaag catttgcggt agcggcttaa cagctaacct
     3061 accacggggt tcggagggca cctggcaaca gaagccctcc actaaatcgg cgaatcacca
     3121 aagatcattt aggttgatac gtaactaata aaagagtagg gctgatcgca agcagccaaa
     3181 agagataaaa tgtcagaaga aacatttccg tatgaccagt gggtcaatga agcactccgt
     3241 agcgttttaa gccgcgcctt aaaacagcta gctgaaaatg gtcccaccgg cgaccatcat
     3301 ttctttatca acttcaacac gacacacgat ggcgtggaaa tcccaggctt cctgcgtgcg
     3361 caatacccgg aagaaataac tattgtgctg cagcaccagt ttgaaaatct cattattgag
     3421 gaccagggct tcgaagtaac gttgtcgttc agcggcaaga aaagccggct ctgtgtgccg
     3481 tttgatgcgg tcacatcctt tgccgaccca ttggttaatt tcggcctgca aattggcgtc
     3541 aaagcggtta atgaagcgat gttgcaagtc caagaggaaa ttgatgacga tgtgacagat
     3601 cacatccagg atgacctgac cgacgacatg gcaggtaatc aacaaatttc tgaagctaaa
     3661 tcaccgacac catttaatcc gg
//
LOCUS       DASCNL010000572         1481 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001185642, whole genome shotgun sequence.
ACCESSION   DASCNL010000572 DASCNL010000000
VERSION     DASCNL010000572.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1481)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1481)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001185642"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(33..>1481)
                     /locus_tag="QF359_07660"
     CDS             complement(33..>1481)
                     /locus_tag="QF359_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase"
                     /protein_id="HJO86820.1"
                     /translation="QYLTYGGLLAHVEATVTALNERGIGRNDRVAIVLPNGPEMASAF
                     IAVAAGATTAPLNPSYREEEFDFYLSDLNTKALIVEKGSSSPALTVASQRNIPVLEIE
                     WAESDPAGLFSFAGVATGERTTNGGHAEPEDGGLVLHTSGTTSRPKIVPLAQKNICAS
                     AEHIKTSLNLQPEDIELNIMPLFHIHGLIAATLSSVRAGASVFCAPGFNALKFFAWVD
                     EAKPSWFTAVPTMHQAILRRASRNQEIVDAVPFRLIRSSSSSLPPQVMQELEDTFGCP
                     VIEAYGMTEAAHQMASNPLPDAPRKPGSVGLAAGPEVAIMDNDSGTLLLSGEIGEIVI
                     KGPNVFSAYEANPQANAEAFTDGWFRTGDQGVIDGDGYISLTGRLKEIINRGGEKISP
                     REVDEVLMDHAAIEQVVTFALPHDKLGEDVAAVVVLHEGEEVEEKEIREFAANRLVDF
                     KVPRKVIFMDEIPKGATGKLQRIGLDEKLGLV"
BASE COUNT          343 a          396 c          393 g          349 t
ORIGIN      
        1 ccatatatgc aaatttttgt catttgctga tgttaaacca gtccgagctt ttcgtcgagg
       61 ccgatgcgtt gcaatttgcc tgtggcaccc ttgggtattt catccataaa tataactttg
      121 cgtggcactt tgaagtcgac cagacggttg gcggcgaatt cgcgaatttc tttttcttct
      181 acttcctctc cttcatgcaa caccacaacc gcagcaacat cttcccccaa tttgtcatga
      241 ggcagggcaa aggtgactac ctgctcgatg gcagcgtgat ccatcaacac ttcatcaact
      301 tcacgcggtg agattttctc gccaccccgg ttgataattt ctttgagtcg gccggtcaga
      361 ctgatatagc cgtcgccatc aattacgccc tgatcgccag tacgaaacca gccgtcggta
      421 aaggcttcgg cattggcttg cggatttgct tcataggctg agaaaacatt cggtcccttg
      481 atgacaatct caccgatctc accggaaagc aggagcgtgc cgctatcatt gtccataata
      541 gccacctcag gtccggcagc caagccaaca ctgcccggct tacggggggc gtccggtaac
      601 gggttgctcg ccatttggtg ggcggcttcg gtcatgccat aggcttcaat aaccggacag
      661 ccgaaagtgt cttcaagctc ttgcatcacc tgagggggca gcgaagatga tgaggagcga
      721 ataaggcgaa agggtactgc atcgacaatc tcctgattgc ggctggcgcg gcgtaaaatc
      781 gcctgatgca tggtgggcac agcggtgaac caagatggct tggcttcgtc gacccaggca
      841 aaaaacttaa gcgcgttaaa gccgggtgcg caaaacactg atgcgccagc ccgcactgaa
      901 gacaaagtcg ccgcaatcag cccatggatg tgaaacagcg gcatgatatt gagctcaata
      961 tcttccggct gaaggttgag cgacgtcttg atgtgctctg ccgaggcgca aatatttttc
     1021 tgagcgagtg ggacaatctt tggcctggat gtcgtgccgg aggtatgcag caccaaaccg
     1081 ccatcctccg gttcagcatg accgccattt gtagtgcgct cacctgttgc aacgccggca
     1141 aaggagaata agccggcggg atcactttcc gcccattcaa tttcgagcac tggaatatta
     1201 cgctggcttg cgacggtaag ggcaggagag gagctgcctt tttcaacgat taaagccttg
     1261 gtattgagat cagacagata aaagtcaaat tcttcttcgc ggtagctcgg attgagaggc
     1321 gctgtcgtcg cgccagcggc aacggcgata aaggcacttg ccatttccgg cccattcggc
     1381 agcacgatgg cgacccggtc attgcggccg atgcctcgtt cattaagcgc agtgactgtt
     1441 gcttcgacat gcgccagcaa tccaccatag gttagatact g
//
LOCUS       DASCNL010000573         1064 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001187821, whole genome shotgun sequence.
ACCESSION   DASCNL010000573 DASCNL010000000
VERSION     DASCNL010000573.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001187821"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..878)
                     /locus_tag="QF359_07665"
     CDS             complement(<1..878)
                     /locus_tag="QF359_07665"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HJO86821.1"
                     /translation="MRIYRHYYDLPEDHRHGAIAIGNFDGVHRGHREVINQAGKYSHE
                     QGVPWGVLTFEPHPRMVFNPDEPPFRITPFHTKARHIEDMGVEFLVVLHFDGELAKIT
                     AEDFVEQVLVGGFDASYVVSGFNFSFGHKGAGNTALLREMSDKLSFTTNGIEEVLDDD
                     GEIISSTRIRQYLAEAKPRDAAQLLGRWFEIEGRISLGDQRGRTIGFPTANIVLDTNT
                     RPAIGVYAIRAGLDRGPDTVWHDGVANLGYRPTFDGDKCLLEAHLFNFDQDIYGAHLR
                     VALVDFIRPEQKFDGV"
BASE COUNT          276 a          290 c          243 g          255 t
ORIGIN      
        1 tcaacaccgt caaatttttg ttccggcctg ataaaatcga ccaaagcaac acgtaaatgg
       61 gcaccataaa tatcttggtc aaagttaaac aaatgagcct caaggaggca cttgtcgcca
      121 tcaaaggtgg gtctataacc caaatttgcg acgccgtcat gccaaaccgt atccggcccc
      181 cgatctaagc ccgcgcggat ggcataaacg ccaattgccg gccgggtatt cgtatccagt
      241 acgatattgg cagtgggaaa tccaattgtt cggccgcgtt gatcaccaag actaatccgg
      301 ccctcaattt caaaccatcg tcccagcaat tgggcggcgt cccgcggctt ggcctcggct
      361 aaatattgac gaatccgggt cgaggaaatt atctcaccat catcatccag gacctcttcg
      421 attccgttag tggtaaaact gagtttgtcg ctcatctctc gcaacaaagc cgtatttcca
      481 gcacctttgt ggccaaacga gaaattaaag ccagaaacga cgtaagatgc atcgaacccg
      541 ccgaccagca cctgctcaac aaaatcctcc gccgtaatct tggccagctc gccatcaaaa
      601 tgaagcacga caagaaattc gactcccata tcttcaatat ggcgcgcttt ggtgtgaaag
      661 ggcgtgattc gaaacggcgg ctcatccggg ttaaaaacca tgcgcggatg gggctcgaaa
      721 gtcaaaactc cccacggaac tccctgttcg tgagagtact tgcccgcttg gttgatcact
      781 tcacggtgac cccggtggac gccatcaaaa ttgccaatgg cgatggcacc atggcggtga
      841 tcttccggca ggtcataata atgtcggtat atgcgcatgc ggcgtggaaa ttgtcagcgc
      901 aacccttatg ggtcaagtac aaattagtga taatccaagg aatatcttta ttccagtttt
      961 ctcggcctgc ctgtcgaatg cttctgacgt gtcttgcgac ggatatcacg tactaacttc
     1021 tcagctgggt cttttgaact catcgatttc tgcctcatct tcat
//
LOCUS       DASCNL010000574         1167 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001189377, whole genome shotgun sequence.
ACCESSION   DASCNL010000574 DASCNL010000000
VERSION     DASCNL010000574.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1167)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001189377"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="QF359_07670"
     CDS             <1..894
                     /locus_tag="QF359_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HJO86822.1"
                     /translation="QLAKLKSTYTDSLIEQINPKTGRVHTNYGQAIASTGRLSSNDPN
                     LQNIPIRTEDGRKIRTAFVPSKGNVLLSADYSQIELRLLAHVANIDVLKQAFHDGVDI
                     HALTASQVFDVPVKGMNPMVRRQAKAINFGIIYGISAFGLARQLGISRTEAAQYIEAY
                     FARYPGIRDYMDRTKESAAENGYVTTLYGRRCHVPGIKDNNSAKRSFAERAAINAPIQ
                     GGAADIIKRAMLRLPGTLADAGLKAKMLLQVHDELIFDVPKKELEKTAALIKTVMETV
                     AHLEVPLVVDTGYGSNWDEAH"
BASE COUNT          303 a          261 c          317 g          286 t
ORIGIN      
        1 cagctcgcca aattgaagag cacctatacc gattcgctga tcgagcaaat caatcccaag
       61 accgggcggg tgcatacaaa ttatggtcag gcaattgcct cgaccggacg tttaagctcg
      121 aacgatccaa atctgcaaaa tattccgatc cgcacagaag atggccgcaa aatcaggact
      181 gccttcgtgc catctaaggg aaacgttttg ttatcggcgg attattcgca aatcgagctg
      241 cgcctgctgg cccatgtcgc caatatcgat gtgttaaaac aggccttcca tgatggtgtc
      301 gatattcatg cgctgactgc ctcgcaggtg tttgacgtgc ctgtcaaggg gatgaacccg
      361 atggtgcgcc gccaggccaa agcgattaat tttggtatta tttatgggat ttcagccttt
      421 ggactggcac ggcaacttgg catctcaagg actgaagcgg cgcagtatat cgaagcctat
      481 ttcgcccgct atccgggcat tcgggattac atggaccgga ccaaggaaag cgctgccgaa
      541 aacggttatg tgacaacgct ttatggtcgg cgctgccatg tgccggggat caaagacaat
      601 aacagtgcca aacgcagctt tgcagagcgc gctgccatca atgcgccaat tcagggaggc
      661 gctgccgata ttatcaagcg cgccatgtta cgcttgccgg gtacgctggc cgatgcaggt
      721 ctaaaagcga aaatgctgtt gcaggtacat gatgaattga tattcgatgt gcccaagaaa
      781 gagttggaaa aaaccgccgc attgatcaaa accgtcatgg aaacagtggc acatcttgag
      841 gtgccactgg tggttgatac gggatatggt agtaattggg atgaagcgca ttaattatat
      901 agagtatggt gtcaataagg ggtgatgttg tgccggagga attacgttga ttagtcttta
      961 gtgaagagga agttcaagct gcgcttatca attatgcgtt gagaagtgat atgcggttgc
     1021 ccaacgccaa tattcacagt ctccatgttt atgaaaaaga cggcatttcg gctactttaa
     1081 aatttcctgc aaatgctgat ggcgatgcac gggaggtggc gttttcggaa gctcatttgg
     1141 cggccgcaat tatcctttat tgccgag
//
LOCUS       DASCNL010000575         3277 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001189693, whole genome shotgun sequence.
ACCESSION   DASCNL010000575 DASCNL010000000
VERSION     DASCNL010000575.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3277)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3277)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3277
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001189693"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="QF359_07675"
     CDS             complement(<1..512)
                     /locus_tag="QF359_07675"
                     /inference="COORDINATES: protein motif:HMM:NF014662.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HJO86823.1"
                     /translation="MLYAELQSEIEKLQVANTPFCVATIVDGRGSIPQEVGAKAIFTT
                     EGLHAGTIGGGRLEIKCRDKAAELLAANVSEPNFFARWNIQKDVNMTCGGEIAMYFEV
                     FRPESEWNIVVFGAGHVSQKLCRFLIELECRILCIDTRQEWLDKLPKSERLEAHQVDH
                     FEDGVERINPV"
     gene            complement(521..1840)
                     /locus_tag="QF359_07680"
     CDS             complement(521..1840)
                     /locus_tag="QF359_07680"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO86824.1"
                     /translation="MADVIYYDQELECMSRPQLEAYQLGKLRHQLNHVYERSPLYRRK
                     LDEAQIKPDDIRTMADIGRIPLTEKEELQQSQIENPPWGDFGCIQPEEAIRVFQTSGT
                     TGVPVRIMLNRKDWFDNFYEQFMHFRCGYGLTEKDILFVPFNYGLFIAWWGFQAAMEK
                     AGLMIVPGGGQSTKDRLRAMVDWSATAVCGTPSYLLFMAETAATMGIDLAGSSIKKLV
                     AAGEPGAAVPATKQAIEELWGAELFDDIGSTEGGNFGYECICHQGTHVSEGLFIAEVL
                     DPETLNPLPDGETGELVLTNLSSESSPLIRYRMKDLVEFDREPCECGRTNLRLKGGVL
                     GRTDDMFHYAGVNVYPSQIQDILHGISTLSLEYRIIVPRIGSGKHLKIIVEPAATDIK
                     SAKLEQACEELAETFKTHIKLTPDLEIVDAGSLARFEGKGKRLIREE"
     gene            complement(1871..>3277)
                     /locus_tag="QF359_07685"
     CDS             complement(1871..>3277)
                     /locus_tag="QF359_07685"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO86825.1"
                     /translation="IINNAGAYRGSGVVVVFLAWGFTMAPYRVPNLKYEGYSVYTNHT
                     TRAPQRGHGCPQVRFAIESQLDTIAEEIGIDPIEIRLRNARVPDEELPNKDNVHQAGL
                     QECIKIAAKKTNLVAKYGRDRKSPPQDTSIRRGVGIGISSYMSGTLIYPNGSGVIVKM
                     NDDGSAIVLTGAIDLGQGAETVITQIIAEELSLDMDDIKIIASDTDTTPQDIGAWISG
                     LTYVTGNAARQAATNARAKLLVVAAEQMNVTADDLYLDNKEIISQSNPDNRLSYREVI
                     AASVANHRGDTVIGEGFWRTMRDEPNHPSLATTKGRWTENYAFSAQTAEVEVDIETGE
                     ARLAKALTVHDCGFPINPGLVKGQIDGQVSMALGHAFMEEVMTKDGYTLNTSWLDYRM
                     PTIHNMAESEDADVITEQYEVGQSYRTKEVGEGLVSGILAAIANAIYDATGVRLHSTP
                     FSPEKILKGLRELERHQK"
BASE COUNT          730 a          884 c          847 g          816 t
ORIGIN      
        1 actggattaa tccgttcgac gccatcttcg aaatgatcga cttgatgagc ttcgaggcgc
       61 tcgcttttgg gcagtttatc gagccattcc tgccgcgtat cgatacacaa gatacggcat
      121 tccagctcta ttaaaaatcg gcacaatttc tgcgatacat gaccggcccc gaaaacgaca
      181 atgttccatt cgctttcggg gcggaacacc tcaaaataca tcgctatttc gccgccacat
      241 gtcatgttca catctttctg gatattccaa cgggcgaaga agttcggctc ggatacatta
      301 gcggcaagca attcggcagc cttgtcccgg catttaattt ccagccgacc accgccgata
      361 gtcccagcat gcaggccttc ggtggtgaaa atagccttgg cgccaacctc ttgaggaata
      421 ctgccccggc catcgacaat cgtggcgacg cagaacggcg tgttggccac ttgcagcttt
      481 tcgatctcac tttgcagttc ggcatagagc atctaataat ttattcctcc cggattagcc
      541 gtttgccctt gccctcgaac cgagcaaggc tgccggcgtc aacgatttcg agatcgggtg
      601 tgagtttaat gtgcgttttg aaagtctcgg ccagttcttc gcaagcttgt tcaagcttgg
      661 cggacttgat gtccgtcgcg gctggctcga cgatgatttt cagatgcttg ccgctgccaa
      721 tccgaggcac aataatccgg tactctaacg acaaggtact gataccatga aggatgtctt
      781 gaatttgtga aggataaacg ttgaccccgg cataatggaa catgtcgtca gtgcgtccaa
      841 gcactccgcc cttaagccgc aagttggtgc ggccgcattc acatggttca cgatcgaatt
      901 ccaccaaatc cttcatgcgg tagcggatca aaggtgagct ttcactcgat aaattggtca
      961 gcaccaattc accggtctcg ccatctggca gagggtttag ggtttcggga tcgagaactt
     1021 cggcaatgaa caaaccttcg gagacatgag tgccctgatg gcaaatacat tcatagccga
     1081 aattaccgcc ttccgtagag ccgatatcat cgaaaagttc agcgccccat agttcctcaa
     1141 tggcttgctt ggttgcaggt acagccgcac cgggttcacc tgccgccacc aattttttaa
     1201 ttgaagagcc ggcaagatcg atacccatag tggccgctgt ttcggccata aaaagcagat
     1261 aggatggtgt accgcaaacc gcggttgcac tccaatcgac catcgcccgg agccggtctt
     1321 tggtgctttg accgccgccg ggtacaatca tcagcccggc tttttccatc gctgcctgaa
     1381 agccccacca agcgataaac aaaccgtaat taaaaggcac aaacagaatg tctttctccg
     1441 tcaggccgta gccgcagcgg aaatgcatga attgctcgta gaaattatca aaccagtctt
     1501 tgcggttaag catgatcctg accggtacac ccgtggtgcc cgaggtctga aaaacccgga
     1561 ttgcttcttc cggttgaatg cagccaaagt caccccaagg cggattttca atctggcttt
     1621 gctggagctc ctctttttcg gttaggggaa tacggccaat atcagccatg gtgcggatgt
     1681 cgtccggttt gatctgcgcc tcatccagct tgcgccggta aaggggactg cgctcgtaaa
     1741 cgtggttcaa ctgatggcgc aatttaccta gttggtacgc ttccaattgc ggccggctca
     1801 tacattccag ttcttgatcg taataaatta cgtctgccat tctcatcccc ccccggggtc
     1861 ggttatttag ctacttttgg tgtctctcca attcccgtaa acctttaagt atcttctcgg
     1921 gagaaaacgg cgtcgaatga agccgtacac cggtggcatc ataaattgca ttggcgatcg
     1981 ccgctagaat accggacacc agaccttcgc ccacttcctt ggtacggtaa gactggccaa
     2041 cttcgtattg ctcggtaatc acatcagcat cctcagattc cgccatattg tggatcgttg
     2101 gcatgcggta atcgagccag ctcgtgttca gggtatagcc atccttggtc ataacctctt
     2161 ccataaaagc gtggccgaga gccatcgata cctggccatc gatctgcccc ttaaccaggc
     2221 caggattgat ggggaaacca cagtcatgaa ccgtcagggc tttcgctaat cttgcttcgc
     2281 cggtttcaat atcgacttcg acctcggcag tttgggcgct gaaggcatag ttttcagtcc
     2341 accggccttt agttgtagct agactggggt ggttgggttc atcccgcatg gtgcgccaga
     2401 aaccttcgcc aatcacggta tcaccgcgat gattggcgac gctggcggcg ataacctccc
     2461 ggtaggagag ccggttatcc ggattgcttt ggctgataat ttccttgtta tcgagataga
     2521 ggtcatctgc cgtaacgttc atctgctcag ccgcgacgac caggagttta gcccgggcat
     2581 tggtcgcggc ctggcgggca gcgttaccgg ttacgtaggt gagaccactg atccaagcgc
     2641 caatatcctg cggcgtggta tcggtatcgg aagcaatgat cttaatgtca tccatgtcga
     2701 gactaagttc ttcagcgatg atttgggtga tgacagtctc agccccctgg ccgagatcga
     2761 tggcgccggt caacacgatc gccgaaccgt cgtcgttcat tttgacaatc acgccggagc
     2821 catttggata gatcagcgtg ccgctcatat aagaagaaat gccgataccg acaccgcggc
     2881 ggattgaggt gtcttggggc ggcgattttc ggtctcggcc gtatttcgcc accagattag
     2941 tttttttcgc agcgattttg atgcattcct gaaggcctgc ttgatggacg ttgtctttgt
     3001 tgggtaattc ctcgtccggc acgcgggcgt tgcgtaggcg gatttcaatc ggatcaatac
     3061 caatctcttc ggcgatggtg tcgagttggg actcaatggc aaagcggacc tgcgggcagc
     3121 cgtggccgcg ttgcggggcc cgggtggtat gattggtata gacagagtag ccttcatatt
     3181 taaggttcgg tacgcggtaa ggcgccatcg tgaagcccca ggcgaggaac accaccacca
     3241 caccactgcc ccggtaagca ccggcattat tgataat
//
LOCUS       DASCNL010000576         1225 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001192237, whole genome shotgun sequence.
ACCESSION   DASCNL010000576 DASCNL010000000
VERSION     DASCNL010000576.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001192237"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(150..995)
                     /locus_tag="QF359_07690"
     CDS             complement(150..995)
                     /locus_tag="QF359_07690"
                     /inference="COORDINATES: protein motif:HMM:NF015818.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HJO86826.1"
                     /translation="MATGLQGTIAALTGKSPSQLSSLSSGSIADVYKISFPGDTPIVA
                     KLSSGLELEARMLNYLQEHSDLPVPQVIHANESLLLMSYLPSGNALNLPAQIHAADLL
                     AALHGITATKYGFEWDTLIGGLHQPNPQSENWLTFFRDHRLIYMGQLAVDKGRLPSGL
                     FCRLREFCDQLDKWLNVPSAPALIHGDMWGGNVLAQKGQITGFVDPAIYYADAEIELA
                     FSTLFSTFGDDFFSRYQEHRPLAPGFFEERRDIYNLYPLLVHVCLFGGSYINSVDAIL
                     KRFGI"
     gene            complement(997..>1225)
                     /locus_tag="QF359_07695"
     CDS             complement(997..>1225)
                     /locus_tag="QF359_07695"
                     /inference="COORDINATES: protein motif:HMM:NF013607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HJO86827.1"
                     /translation="DYLVAMDRSNIDNLDYLVPTNMTQKIYLFLEFAPRLNHSDVPDP
                     YYGGPTGFDVVLDLIEEASKELLAHIRKIDL"
BASE COUNT          349 a          286 c          298 g          292 t
ORIGIN      
        1 ccgaaatgca aatcgttcaa agtgtgctcg gtgaagtgcc ggtgattggc atgtatgcta
       61 atggtgaaat atccaataac cggcttcata gctacaccgg tgtactcacc ttatttacct
      121 aaaaaagtgt accaggtaca ctttatttat taaattccga agcgtttgag gatggcatcg
      181 accgaattaa tataagaccc gccgaacagg caaacgtgaa ccaagagggg gtagagattg
      241 taaatatcac gccgctcctc gaaaaatccc ggtgccagcg ggcggtgttc ctgatagcgg
      301 ctaaaaaagt catcgccgaa agtcgaaaat agtgtcgaaa atgctagttc aatttcagca
      361 tcggcataat aaattgccgg atcaacaaag cctgtaatct ggcctttttg ggccaacaca
      421 ttgccgcccc acatgtcgcc gtgaataagc gccggtgctg atggtacatt cagccattta
      481 tccagttgat cacaaaactc gcgcaggcga cagaaaaggc ccgatggcaa acggccctta
      541 tccacagcga gttggcccat atagatcagc cggtgatcac gaaaaaacgt cagccaattt
      601 tcagattgcg gattgggctg atgcagcccg ccgatcaacg tgtcccactc aaatccatat
      661 ttggtggcgg taattccatg cagcgccgcc agtaaatccg ctgcatgaat ttgcgccggt
      721 aggttgagcg cgttaccgga aggcagataa ctcatcaata atagactttc gttagcgtgg
      781 ataacttgcg gcaccggcaa atccgagtgt tcttgcagat aatttagcat ccgtgcttcc
      841 agctcaagac cactgctgag cttggctaca attggcgtat cgccggggaa gcttatttta
      901 taaacgtcgg caatgctgcc actggacaaa gaagacaact ggctgggaga tttaccggtt
      961 agagcggcga tggtaccttg aaggccagtc gccatttcag agatcgattt tacggatatg
     1021 ggctagtaat tctttagaag cctcttctat cagatcaagc acaacatcaa atccggttgg
     1081 cccgccataa taggggtccg gaacatcaga gtggttaagc ctaggggcaa attccaaaaa
     1141 aaggtaaatt ttttgcgtca tattagtggg aaccagataa tcgagattat caatattgct
     1201 gcgatccatg gcgaccagat aatca
//
LOCUS       DASCNL010000577         1581 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001201968, whole genome shotgun sequence.
ACCESSION   DASCNL010000577 DASCNL010000000
VERSION     DASCNL010000577.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001201968"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="QF359_07700"
     CDS             complement(<1..495)
                     /locus_tag="QF359_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HJO86828.1"
                     /translation="MARIVQKFGGTSVADIERIKNAALRAQAEYEAGHEVVVVVSAMA
                     GVTNQMVEYVDQMGNLSDAREYDVVVSAGEQSNAGLMALALQDLGIQARSWLGWQIAI
                     HTDEIHGKARITGIDTAELEKRLADGEIAVVPGFQGISLANRVTTLGRGGSDLTAVAL
                     AGALN"
     gene            709..1467
                     /gene="ubiG"
                     /locus_tag="QF359_07705"
     CDS             709..1467
                     /gene="ubiG"
                     /locus_tag="QF359_07705"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HJO86829.1"
                     /translation="MTLSTQNSELSGTASAKEVANFTCLAQEWWNPKGDFKSLHQINP
                     LRMTYIRDQLCAHFNRDSENVSSLEGLSVVDIGCGGGLICEPLARLGAEVTGIDAASE
                     SIEVAATHSKQMGLEITYKNKLPEDLVAEGQTFDVLINMEVIEHVADIGAFMAACAAL
                     LKPGGLMVGATLNRTFKSLTLAKVAAEYVLRWVPAGTHDWRKFVKPSEFGHYVRASGL
                     ELSDLTGLQFNLIGGWSLSKNLDVNYFMSAAKPR"
BASE COUNT          380 a          374 c          397 g          430 t
ORIGIN      
        1 gttaagggca ccggcaagcg ccaccgccgt caaatcagag ccaccgcgcc cgagcgtagt
       61 gacccgattg gcgaggctaa ttccctgaaa tccaggcact acagcgattt cgccatctgc
      121 cagacgtttt tcaagctcag ccgtatcaat gccggtgatt cgtgctttac catgaatctc
      181 gtcggtgtgg atggcaatct gccaaccgag ccacgagcgc gcctgaatac ccaagtcttg
      241 cagcgctaag gccattaacc cggcatttga ttgttcaccg gcggagacta caacatcata
      301 ttcgcgggca tcagaaagat tgcccatttg gtcgacatat tcaaccattt ggttggtcac
      361 accggccatc gccgaaacaa cgacgacgac ttcatggccg gcctcatatt ccgcttgggc
      421 gcgtaacgca gcgttcttaa tacgctcgat atccgcgacg gacgtgccgc cgaatttttg
      481 tacaattcgt gccattttac tcttcccata ccgattttcc ggatgtgtct tccggctgtg
      541 acggttgcgc ctaactacct gataaattta aagaaaccgc aataattcaa tgataaatat
      601 gacgctttct gttgccgtta gccggacgcg cggtatacat actctttctc atgcccattt
      661 tgcaagagat gtggtgtgtt atcggcagat ttcaggtatg aagtattgat gacgttatcg
      721 actcaaaatt ctgaattaag tggtacggct tcggcaaaag aagtcgcaaa ttttacctgc
      781 ctcgcccaag aatggtggaa tccgaaaggt gattttaaat cgttgcatca gattaatccg
      841 ctgcgaatga cctatattcg ggaccaactc tgcgctcatt ttaaccggga ttcagaaaat
      901 gtcagttcgc tagaaggttt gtcggttgtc gatattggct gtggtggtgg cttgatatgt
      961 gagcccttag ctcggctagg cgccgaggtt acaggtattg atgcggcttc ggaaagcatc
     1021 gaagttgcgg cgacccactc caagcaaatg gggctcgaaa ttacttataa aaacaaattg
     1081 ccggaagacc tggttgccga aggtcagacc tttgacgttt tgatcaatat ggaagtgatt
     1141 gagcatgttg ctgatatcgg cgcttttatg gctgcctgtg ccgcgctttt aaaaccaggt
     1201 ggtctgatgg tgggtgcgac actcaaccgg acgtttaaat cgctcaccct ggcgaaagtg
     1261 gcggcggaat atgttttgcg ctgggtgccg gcgggcactc atgattggcg taaattcgtt
     1321 aaaccgtctg agtttggcca ttatgttaga gcgagtggct tggaattatc tgatctaacc
     1381 ggtttgcagt ttaatctgat tggcggctgg tcgctatcta aaaatctgga tgtgaattac
     1441 tttatgtctg cggcaaaacc aaggtaattt ttttaagaaa gattgcgctt tttaaaagga
     1501 atgcgcgaga ccggaatatc ttcctcaacg agattttcga cttcggtttc ggtcgcctca
     1561 ccataaatac cacgttcttc a
//
LOCUS       DASCNL010000578         1725 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001204043, whole genome shotgun sequence.
ACCESSION   DASCNL010000578 DASCNL010000000
VERSION     DASCNL010000578.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001204043"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="QF359_07710"
     CDS             complement(<1..182)
                     /locus_tag="QF359_07710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HJO86830.1"
                     /translation="MTDWMDRPLADMAQALHDGNVSAVEIAETAIARHDAWDDKLTAY
                     KTWNAENALDQAKAAD"
     gene            355..1368
                     /locus_tag="QF359_07715"
     CDS             355..1368
                     /locus_tag="QF359_07715"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HJO86831.1"
                     /translation="MAKKPAKKKAPVSKNIRKKKKGLTKADVIRKGKQLSNWGKWGRN
                     DELGVLNYIKPKDIVDAAKLIKKGKVFRLGLNLDEKGPQNGLFGGRWNPLHHMMATGT
                     DAKEGRQDKTVGIRYADDFINLPTQAASQWDALAHVFAGDKMWNGYDAALVDSSGAHK
                     NGIEKFADKMVGRGVLLDVARYKKKARLADGYGITVNDLNRTAKAQGAEVRRGDFVII
                     NTGQMADCLDKGEWGGYGGGDAPGLAFETVDWIHEKEIAGICSDTWGIEVRPNKTVDG
                     TNQPWHWVTIPYIGIVHGEIWYLRELVADCAKDGVYEFFLCAPPLVITRGTGSPINPQ
                     AIK"
     gene            1380..>1725
                     /locus_tag="QF359_07720"
     CDS             1380..>1725
                     /locus_tag="QF359_07720"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HJO86832.1"
                     /translation="MARRFVDISMHLENDVVSDPPGYGPEIEYLNHQDTAKDVVEFFP
                     GLAKEDLPDGEGWGIERINLITHNGTHLDAPYHFHSTMNKGERAITIDEIPLDWCFRP
                     GVKLDFSDLDDGY"
BASE COUNT          455 a          404 c          464 g          402 t
ORIGIN      
        1 tgatcagccg ccttggcttg atcaagcgcg ttctcggcgt tccacgtttt ataagctgtg
       61 agtttatcat cccaggcatc atggcgggca atggcggttt cagcaatttc aaccgcgctt
      121 acattgccat cgtgtaaagc ctgagccatg tcggctaggg ggcggtccat ccagtcggtc
      181 ataatatcgt gtctacccct ctaaaatttg cggcaatata aaacaccaac aatcaagcga
      241 cggcaaggca cgtgccgaat agtgagcaat tgctcattat gtctcgacag ttaaatgagg
      301 ctgacataaa ctgcgaaaaa agtttcaatc gattgatcca tgggagaatt tataatggca
      361 aaaaaacctg ccaagaaaaa agcacctgtc agcaaaaata tccgcaaaaa gaaaaaaggc
      421 ctgaccaagg ccgacgttat tcgcaagggc aaacaactat cgaattgggg caagtggggc
      481 aggaatgatg aattgggtgt gctcaattac atcaagccca aggatatcgt cgatgctgcc
      541 aaactgatca aaaagggcaa ggttttccgg ctcggtttga atttagatga aaaaggcccg
      601 caaaacgggc ttttcggcgg gcgctggaac ccattgcatc acatgatggc aaccggcacc
      661 gacgccaaag aaggccgtca ggataagaca gtcggcatac gttacgctga tgactttatt
      721 aatctgccga cacaggccgc cagccaatgg gatgcgctgg ctcatgtctt tgccggcgat
      781 aaaatgtgga atggttatga tgccgcattg gtcgactcgt ccggtgccca taaaaacggt
      841 atcgaaaaat tcgctgataa aatggtcgga aggggtgtgc tgctggatgt tgcgcgctac
      901 aaaaagaaag ctcgtctggc tgatggctac ggcatcacgg tcaatgatct caaccgcacg
      961 gctaaggccc aaggtgctga agtgcgtcgc ggtgattttg tcatcatcaa caccggccaa
     1021 atggccgatt gtctcgataa aggtgagtgg ggtggctatg gcggaggcga tgcaccgggc
     1081 ctggcttttg agacggtcga ttggattcat gaaaaagaga ttgctggaat ttgctcggat
     1141 acttggggta tcgaagtgcg gccgaacaag acagtcgacg gcactaacca gccctggcac
     1201 tgggtgacca taccttatat cggcatcgtc cacggcgaaa tttggtatct ccgtgagttg
     1261 gttgcggatt gcgccaaaga cggcgtctat gagtttttcc tctgtgcacc acctttagtg
     1321 atcacccgtg gcacaggctc accgatcaat ccgcaagcta ttaagtagag cacctaacga
     1381 tggcgcggcg ctttgtcgat atctccatgc atttggaaaa tgatgtggtc tcagacccgc
     1441 ccggttatgg gccggaaatc gagtacctta atcatcagga tactgccaaa gacgtcgttg
     1501 agttctttcc cggcctagcc aaagaagacc tgccggacgg tgaaggttgg ggtattgagc
     1561 ggataaattt gatcacccat aacggcaccc atttggatgc gccctatcat tttcattcga
     1621 caatgaataa gggtgagcgc gccatcacaa ttgatgaaat accgcttgat tggtgcttcc
     1681 ggccaggcgt taagcttgat tttagtgatc tcgatgacgg ctatg
//
LOCUS       DASCNL010000579         1110 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001206624, whole genome shotgun sequence.
ACCESSION   DASCNL010000579 DASCNL010000000
VERSION     DASCNL010000579.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1110)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001206624"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..168
                     /locus_tag="QF359_07725"
     CDS             <1..168
                     /locus_tag="QF359_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO86833.1"
                     /translation="PSLGGKIGLDATNKLPPETKRDWGVKIRMTDEVIEKVSDMWDKL
                     GLPGEGKSIWK"
     gene            186..>1110
                     /locus_tag="QF359_07730"
     CDS             186..>1110
                     /locus_tag="QF359_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HJO86834.1"
                     /translation="MTDSSNMLNLLEDLLAKAKAKGADAADAVHIESQSLAVAQRLSN
                     PEKLERSESADIGLRALVGKRQAIVSSSDIGTDALDELVERVVAMAKSVPEDFYCGIA
                     DPDQLATEIVDVESCDPNEPTAETLVDWANRAEESARAIEGITNSEGAEAGWGRATVS
                     VAATNGFAQTYSGSHYSLSASVLAGEGTAMERDYDYTGAVYADDLMTPEEIGTSAGEK
                     AVKRLNPQKAETAEVPVIYDPRVSRGIVIHLTSAINGSSIARETSFLKDKMGEQVFSA
                     GMTIYDDPHRARGLRSKPFDSEGVANKKRKII"
BASE COUNT          287 a          288 c          308 g          227 t
ORIGIN      
        1 cccagcctcg gcggcaagat cggcctcgat gctaccaaca aactgccacc cgaaaccaaa
       61 cgcgattggg gcgttaaaat ccgcatgact gatgaagtga ttgagaaggt ctccgacatg
      121 tgggacaaac tcggactgcc cggagaaggc aaatctatct ggaaataaaa ttgggaacat
      181 aataaatgac cgatagctca aacatgctca atctgctgga agatttactc gctaaagcaa
      241 aagccaaggg cgccgatgct gccgacgcgg tgcacattga aagccagtcc ttggcggttg
      301 ctcaacggct tagtaatccg gaaaagctgg agcgttcgga aagtgctgat atcgggctca
      361 gggcgctggt cggcaagcgt caggcaatcg tttcatcttc tgatattgga acagatgcct
      421 tggatgaact ggttgagcgc gttgtcgcca tggcaaaatc tgtccccgaa gacttttatt
      481 gcggtattgc cgaccctgat caactggcga ccgaaattgt tgacgtcgag agctgtgacc
      541 caaatgaacc gacggcagag actctggtcg attgggctaa ccgcgccgag gaaagtgccc
      601 gtgccattga aggcattacc aattcagaag gcgccgaagc gggctgggga cgtgctacag
      661 tctcggttgc cgcgaccaac ggctttgccc agacttattc cggttcgcac tattctttga
      721 gtgcttctgt cttggccggt gagggcacgg cgatggagcg ggattacgat tataccggtg
      781 cggtttatgc cgacgatcta atgactccgg aggaaatcgg caccagcgcc ggtgagaaag
      841 cagtgaaacg cttgaaccca caaaaagccg aaaccgccga agtgccggtg atttatgacc
      901 cccgcgtatc ccgcggcatt gtcatacatc taacgagcgc cattaacgga tcatcgattg
      961 cgcgggaaac cagcttcctc aaagataaaa tgggcgaaca agtattttcc gccggcatga
     1021 ctatctatga cgatccccat cgcgcccggg gtctccgctc caaaccgttt gacagcgaag
     1081 gggttgccaa caagaagcgc aaaatcatag
//
LOCUS       DASCNL010000580         1339 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001207060, whole genome shotgun sequence.
ACCESSION   DASCNL010000580 DASCNL010000000
VERSION     DASCNL010000580.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1339)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1339)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1339
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001207060"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="QF359_07735"
     CDS             <1..477
                     /locus_tag="QF359_07735"
                     /inference="COORDINATES: protein motif:HMM:NF013739.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO86835.1"
                     /translation="PYELSELLPDITVPTGTRAIVNVHFRLDDPPNLPNGAPFVGLVG
                     STAQWLFKRGDVFSVTISAADELAKKTNDEIAVIIWPEIAKVIGRDDGTIPLVRVIKE
                     QRATIAQTPEQNHRRPDSSTKWQNLFLAGDWTNTGLPATIESAVYSGQKAADLLKK"
     gene            734..1240
                     /locus_tag="QF359_07740"
     CDS             734..1240
                     /locus_tag="QF359_07740"
                     /inference="COORDINATES: protein motif:HMM:NF017945.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HJO86836.1"
                     /translation="MEFGMEYWTFIVRWLHVLSGVMWIGLLWYFNFVQTPTVPTIPDE
                     LKPAIPKHIMPVALFWFRWAALSTLVWGLVLAWMNGYLGDALAIGLTSGAARDASIGF
                     GMWMGVIMAFNVWFIIWPNQQKVIGLVEASDEEKPKAARTAALASRTNTMLSIPMMYS
                     MVSAQNLY"
BASE COUNT          344 a          304 c          336 g          355 t
ORIGIN      
        1 ccttacgaac tatccgagct gctgcctgat atcaccgtgc caaccgggac acgcgccatt
       61 gtgaacgtac attttcgtct cgatgatccg ccgaacttgc ctaacggtgc tccttttgtt
      121 ggtctggttg gcagcaccgc acaatggctg ttcaaacgcg gtgatgtgtt ttcggtgaca
      181 ataagcgctg cagatgaatt agccaaaaag acaaacgatg aaatcgccgt aataatctgg
      241 cctgagatcg ctaaagtgat tggccgtgac gatggcacga taccgctggt tcgcgttatc
      301 aaagagcagc gcgcaacaat tgcccagaca ccggagcaaa accaccgccg ccctgattcg
      361 tcgactaaat ggcaaaattt gtttttggcg ggtgattgga ccaacaccgg attgcctgca
      421 accattgaaa gcgccgtgta ttccgggcaa aaagctgcgg atttactcaa aaaatagaaa
      481 aactgttaat tatttggtaa gaacctacca aataatcttt tgattgtgta tacttatccg
      541 gctgtttgga attaaaatag ctgggggtaa acccttttgg tttaacaatt agctcaggag
      601 aaagagggag aattatggga aatccactcg attcattaac cggcactgtc atcagtggcc
      661 ttattttaac cgtcgtaatg gtcttattga ccaacatgat cgcgtcttaa attagcgaag
      721 aggaggtctt atcatggaat ttggcatgga atattggacg ttcatcgttc gctggctgca
      781 cgttttaagc ggcgtcatgt ggatcggtct gttgtggtac tttaacttcg tacaaacacc
      841 gaccgtaccg accattccgg atgaactaaa accggcgata ccaaaacaca ttatgccggt
      901 agcattattt tggttccgct gggcagcact ttccaccctg gtttggggtt tggtgctggc
      961 atggatgaac ggctatctcg gcgacgcgct ggcaattggt ttgaccagtg gcgctgcccg
     1021 tgacgcatct atcggcttcg gcatgtggat gggtgtcatt atggccttca atgtttggtt
     1081 tattatttgg ccgaaccagc aaaaagtgat tggcttggtt gaagccagtg acgaagaaaa
     1141 gccgaaggct gcgcgcactg cggcattggc atctaggacc aacaccatgt tgtcgatccc
     1201 aatgatgtac tcaatggtat cggcgcaaaa tctttattaa gtagctagct ttaaggctaa
     1261 ccaaggaacg ggatcgctgt ggcggttccg tttttttgtg ccgaaataac caaaaaacta
     1321 ctgtgaccct catcatagc
//
LOCUS       DASCNL010000581         2404 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001208530, whole genome shotgun sequence.
ACCESSION   DASCNL010000581 DASCNL010000000
VERSION     DASCNL010000581.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001208530"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="QF359_07745"
     CDS             <1..315
                     /locus_tag="QF359_07745"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dimethylallyltransferase"
                     /protein_id="HJO86837.1"
                     /translation="LYTKCEVRFDWMIDNGVLDEVRALMELNLEPSLPVMKALGVPEL
                     IAHLRDDITLEDAVIAVKQATRHYAKRQMTWFRGQIVQKYRVNEQYSERLLPEIFSNI
                     VI"
     gene            475..2235
                     /gene="ilvB"
                     /locus_tag="QF359_07750"
     CDS             475..2235
                     /gene="ilvB"
                     /locus_tag="QF359_07750"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HJO86838.1"
                     /translation="MSSNRYTGGEIILKALADQDVEVVFGYPGGVTLPLYNDIYKQNR
                     LRHVLVGHEQGGVHAAEGYARSTGKTGVAMATSGPGATNTVTGLVDALMDSIPVVCLT
                     GQVTSQLIGNDAFQEADTTGITRPATKHNYLVKSTEDLARIIHEAFYIASHGRPGPVL
                     IDIPKDIIMGMGEYVGSEGIEPRNYKPQIKGDREAIEEAVDMIASAKRPIIYAGGGVI
                     NSGPEASKLLTKLAKMTGFPCTTTLMALGAYPTTDRQFLGMPGMHGTYEANLAMHECD
                     VMVNFGARFDDRVTGNTDLFSPRSQKIHVDIDPSSINKNIAVDLAIVGDAKSVLSDII
                     TIWNEKQPKINHDTIDDWWATIEKWRAVDCLGFDQDKKGDIKPQYALSRLSEILNSDD
                     YYVTTDVGQHQMWAAQYVQFDEPNRWMTSGGLGTMGYGIPAAMGVQIAHPDSTVVCVT
                     SEGSMMMNVQEMATIVKEGLAVKILCLNNKVLGMIRQWQELFHENNESECDLSRGPDF
                     CRLAESMGFTALVCDKADDVDASIKALLATEGPAFLLMATDRMQNVFPMIPAGAAHND
                     MVLAPNQKMAIVEDNDNVLA"
     gene            2277..>2404
                     /locus_tag="QF359_07755"
     CDS             2277..>2404
                     /locus_tag="QF359_07755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HJO86839.1"
                     /translation="MFNNSVQVHTFSILVENDPGVLARVIGLLSGRGYNIDSLTVA"
BASE COUNT          618 a          541 c          644 g          601 t
ORIGIN      
        1 ctctacacta aatgtgaagt gcggtttgac tggatgatcg ataacggcgt gctagacgaa
       61 gtgcgcgcac ttatggagct caatcttgag ccaagtttac cggtgatgaa ggcgcttggt
      121 gtgccggaat tgatcgccca tctgcgtgac gatataaccc tggaagatgc cgtaattgcg
      181 gtaaaacagg cgaccagaca ctatgcaaaa cggcaaatga cctggtttcg tggacaaata
      241 gttcaaaaat atagggtaaa tgagcaatat tcggaaagat tactaccgga aatcttttca
      301 aatattgtca tttaaatgtt gacgccgtat cgctaaaggt ataatttccg ccgacttgcg
      361 ccacactgga ccacccacct aggttaatta ggggggacct ggtggcgccc tgtttttcta
      421 aattgctaaa atttgatttg aaggtgccgt ttggcgcgac tatggagaag gaaaatgtcg
      481 agtaaccgat atactggcgg agagatcatt ctgaaagctt tggcggatca ggatgtggag
      541 gtcgtgtttg ggtatccggg tggcgtgacg cttccgctct ataacgacat ctataaacaa
      601 aatcgcctgc gccatgttct ggttggccac gagcaaggcg gcgttcatgc tgccgaaggc
      661 tatgcccgct cgaccggtaa aaccggtgtg gcgatggcga cctctggccc cggtgcgacc
      721 aataccgtaa ctggtctggt tgatgcgttg atggatagca ttccagtcgt ttgtctgacc
      781 ggtcaagtca ccagccaatt gatcggcaat gatgcgttcc aggaagccga taccaccggc
      841 attactcggc cagcaaccaa gcataattat ttagtcaaat caaccgagga tctcgctcgc
      901 attatccatg aagcatttta tattgcttcc catggccggc cgggtccggt gctgatcgat
      961 attcccaagg acatcatcat ggggatgggt gagtatgtcg gctcggaagg cattgagcct
     1021 cgtaattaca agccgcaaat caagggtgac cgcgaggcga ttgaagaggc tgtcgacatg
     1081 atcgcatccg ccaaacggcc aattatttac gctggtggtg gtgttataaa ttccggcccg
     1141 gaagcctcta agctattaac taaactggcc aaaatgacgg gctttccttg cactacaacg
     1201 ttgatggcct tgggcgccta tccgacaaca gataggcaat tccttggcat gcccggtatg
     1261 cacggtactt atgaggccaa cctcgcaatg cacgaatgtg atgtcatggt taattttggt
     1321 gcacgtttcg atgaccgggt aaccggcaat acggatttgt tttcaccgag gtcacaaaaa
     1381 atccacgttg atatcgatcc ttcttcgatc aataaaaata tcgccgttga tctcgctatc
     1441 gtgggggatg cgaaaagtgt tttgtccgat atcattacga tttggaatga gaaacagccg
     1501 aagattaacc acgacacaat cgatgactgg tgggcaacca tagaaaaatg gcgtgcggtt
     1561 gattgtcttg gttttgacca agataagaaa ggcgacatca aaccgcaata tgcattgtcc
     1621 cggttgagcg agatattgaa cagcgatgac tattacgtca ccacagatgt tgggcagcat
     1681 caaatgtggg cagcgcaata tgttcaattt gacgaaccta atcgttggat gacatcgggt
     1741 ggccttggta ctatgggcta tggtattccg gcggcaatgg gtgttcagat cgcgcatccg
     1801 gactcgaccg tggtctgtgt tacttctgaa ggctcaatga tgatgaacgt tcaggaaatg
     1861 gcgactatcg ttaaggaagg tctggcggtt aaaattctct gcctgaataa caaagtgctg
     1921 ggtatgattc gccaatggca ggaactcttc catgaaaata acgagtcgga atgcgacctc
     1981 agccgcgggc ccgatttctg tagattggca gaatccatgg gcttcaccgc tttggtatgt
     2041 gataaggccg atgacgttga tgcctcgatc aaggcgttgc tggcgaccga aggtccggca
     2101 tttctcctga tggcaaccga tcgaatgcaa aacgttttcc cgatgatccc cgccggtgcg
     2161 gcacataatg atatggtcct ggcacccaat cagaaaatgg cgatcgtcga agacaacgat
     2221 aatgtattgg cctaggcaaa acctgatttc ctggggagta aattgaagtg aataacatgt
     2281 ttaacaatag tgtgcaggtc cacaccttct cgatcctggt ggaaaatgat ccgggtgtgt
     2341 tggcacgcgt tatcggcttg ttgtcaggcc gcggctataa cattgacagt ttaaccgtgg
     2401 ccga
//
LOCUS       DASCNL010000582         1621 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001208584, whole genome shotgun sequence.
ACCESSION   DASCNL010000582 DASCNL010000000
VERSION     DASCNL010000582.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001208584"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(15..1343)
                     /gene="senA"
                     /locus_tag="QF359_07760"
     CDS             complement(15..1343)
                     /gene="senA"
                     /locus_tag="QF359_07760"
                     /inference="COORDINATES: protein motif:HMM:NF041186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1903257 - selenoneine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenoneine synthase SenA"
                     /protein_id="HJO86840.1"
                     /translation="MNIFTDKHFEMPAAQLAGMVEDAYDYTLACVADLDDEQLTVPLA
                     EVVNPFRWELGHCAFFYDIFLLRVLDATREPMLENGDNLYNSFAVDHDDRWYLDMPDR
                     QGTLDYMERVKDAVLESLVSSQPDAKETYLHLLAVVHSDMHCEAFTYMRQTLGYAEPA
                     FAGKRANGSGAGPLPGDVDVSGGMFELGADPKAGFTFDNEKWAHTVEVAPFKIARAAV
                     TNAEFAAFIDDGGYLAQDLWSTQGWIWRTKSGAQQPIYWQRGDGGWLRRHFDKIVPME
                     PHAPAVHIAWYEAEAFCNWAHRRLPSEAEWELAASAEPSGGGINGIKRRYPWGDEDPE
                     PELANLDRRMNGCADVASFAEGDSAFGCRQLIGNVWEWTASPFYPYPGYVIDYPYKEY
                     SAPWFGYRKVLKGGSWGTRQRFAYNTLRNFFQPYRNDIFAGFRTCALEHS"
BASE COUNT          391 a          452 c          411 g          367 t
ORIGIN      
        1 aggatttgtg ccgcttagga atgttccaag gcacaggtgc ggaagccggc gaaaatatcg
       61 ttccggtagg gctggaagaa gttccgtaac gtgttgtaag cgaaacgctg gcgtgtcccc
      121 caagagcctc ctttcaacac cttacggtag ccgaaccatg gggccgaata ttccttgtat
      181 ggataatcaa tcacataacc gggataggga tagaatggcg aagctgtcca ttcccagaca
      241 ttgccgatca actgacggca gccaaatgcg ctgtcacctt cggcgaagct ggcaacgtct
      301 gcgcagccgt tcatacgcct atcgaggttg gccagttcag gttcgggatc ctcatcgccc
      361 cagggatagc gtctcttgat gccgttaatg ccaccaccgc taggttcggc gctagccgcc
      421 agttcccatt cagcctcact gggcaatctt cgatgggccc aattgcaaaa tgcctcggct
      481 tcataccacg cgatgtggac ggccggcgca tggggctcca tgggcacgat tttgtcgaaa
      541 tgccggcgca gccagccacc gtctcctcgt tgccaatata tcggttgctg ggcgccgctc
      601 ttggtccgcc atatccaccc ctgggtgctc caaagatctt gtgccagata accgccatcg
      661 tcgatgaaag cagcaaattc agcgttggtc actgcggcgc gcgcgatttt gaaaggcgcc
      721 acttcgacgg tgtgagccca tttctcgttg tcaaaggtga atccggcttt cggatcagca
      781 cccaattcaa acatgcctcc cgaaacatcg acatcaccgg gtagcgggcc cgcgccactt
      841 ccgttcgccc tcttaccggc aaatgcaggt tccgcatagc ccagcgtctg gcgcatatag
      901 gtgaaggctt cgcaatgcat gtcggaatga accaccgcga gcaggtgaag ataggtttcc
      961 ttggcgtcgg gctggctgga cacaaggctt tcaaggaccg catccttcac cctttccata
     1021 tagtccagcg ttccctgacg atcaggcatg tcgagatacc agcggtcgtc atgatctacg
     1081 gcgaaggaat tatataaatt gtcgccattt tccagcattg gctcccgcgt tgcgtccaac
     1141 acgcgaagca gaaaaatatc gtagaaaaaa gcgcagtgac ccaattccca gcggaaagga
     1201 ttgacgacct ccgccaacgg tacggtaagc tgttcatcgt ctaaatcggc gacacaagcc
     1261 aaggtgtagt cgtaggcgtc ctcgaccatt ccggcaagtt gcgcggccgg catttcaaaa
     1321 tgtttgtcgg taaaaatatt catctaactt tccccgtttt tttcgcgccg atgggtcaaa
     1381 taaccggttg aagatcggcg gtcaggaccg tcggctcata aagacagata aaaaactaaa
     1441 ctcggtgtgg gcagataact ttgatataga tcaatttacg ctgttcaaat aaaggccact
     1501 catcaaacct ctacccaatt gccatcaact ttaagccgat gactaatcgg aaaagccaat
     1561 tcaatcgatt gtttggcaaa acagccttct ttggccgcct taacgagccg gattaaatct
     1621 g
//
LOCUS       DASCNL010000583         2315 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001211817, whole genome shotgun sequence.
ACCESSION   DASCNL010000583 DASCNL010000000
VERSION     DASCNL010000583.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001211817"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /gene="argF"
                     /locus_tag="QF359_07765"
     CDS             <1..677
                     /gene="argF"
                     /locus_tag="QF359_07765"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HJO86841.1"
                     /translation="GRGESVADTARVLSRFADAIMIRTDSHQKLEWLAEYASVPVING
                     LTDDSHPNQIMADVMTFEEHRGPIEGKTIAWVGDGNNVAASWLHAAVKFNFKFNIATP
                     QEFRLPDHLIEWANSEDGDITITNIAENAVAGADCVVTDTWVSMGDDDERDKRLELLS
                     PYQVNDALMAGAKSEALFMHCLPAHRGEEVTDTVIDGKQSVVWDEAENRLHAQKGILA
                     YCLDVL"
     gene            690..1616
                     /locus_tag="QF359_07770"
     CDS             690..1616
                     /locus_tag="QF359_07770"
                     /inference="COORDINATES: protein motif:HMM:NF013589.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HJO86842.1"
                     /translation="MTGNQFPNEVQPFSIEGANVRGRLVRLGQAFDDILSSHNYPEPV
                     GGLMGELTAMTAALADSLKYDGLFILQTQSDGPVSMMVVDVTSDGTIRGYARYDKDSF
                     YRDTEINTAVPHIMGSGHIAFTVDQGLDTERYQGITTLEGASLAECAQSYFRQSEQLE
                     TALLLAADSTTRHATALMIQKMPMTGKGAEQRRNLTPEEDDESWRSAVILMSSMTTAE
                     LLDPGLSSLDLLYRLYHETGVRIYTSKPLKFQCRCTEEKISATLASFSPDDLADMKTA
                     KGLIVTTCEFCLTEYNFDDDALATLRALNSPG"
     gene            1665..2255
                     /locus_tag="QF359_07775"
     CDS             1665..2255
                     /locus_tag="QF359_07775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86843.1"
                     /translation="MMKKNASRLFGFCAIALLAACQANLPSEQLPDMTFKHLSLIQLR
                     VIDIQLVSNFERSVDAPHVAHKFPVSPEKALIQWAEDRLQIAGQKNTARFTILRADAQ
                     EIPLKLDKSFKGMFKNQQSDRYDTFIEAQIEILDERNIRQASVTAKAEQSITVSEATP
                     LTDRRKIWYNLVEKLMMKFNTAIENSIVNNFQGYLF"
BASE COUNT          610 a          586 c          565 g          554 t
ORIGIN      
        1 tcgggcgcgg cgaaagcgtt gccgataccg cgcgcgtatt gtcacgcttt gccgatgcga
       61 tcatgatccg gacagattct catcaaaaac tcgaatggct ggcggaatac gcttccgtgc
      121 cggtgatcaa tgggctgacc gatgacagcc accccaatca gatcatggca gacgtcatga
      181 cttttgaaga acatcggggg ccgattgagg gcaaaaccat tgcctgggta ggtgacggta
      241 ataatgtggc ggcgagctgg ctccatgcgg cagttaagtt taactttaaa ttcaacatcg
      301 caacaccgca ggaattccgt ttgccggatc atctgatcga atgggcaaat tctgaagacg
      361 gcgatatcac catcaccaat atcgccgaga atgctgtcgc cggcgctgat tgcgtcgtta
      421 ccgatacctg ggtttcgatg ggcgatgatg acgagcggga taagcgtctt gaattactga
      481 gcccctatca agtcaatgat gcgttgatgg caggcgctaa atcggaagcg ctgtttatgc
      541 attgcctgcc agcgcaccgt ggcgaggaag tcactgatac ggtcattgat ggcaaacaaa
      601 gtgttgtctg ggatgaggcc gaaaaccgcc tgcatgctca aaaaggcatc cttgcctatt
      661 gcctggatgt gctttaacgc tttccaacta tgaccggcaa ccaatttccg aatgaagttc
      721 aacccttcag tattgaaggc gccaatgtgc ggggccgttt ggtacggctg ggacaggctt
      781 ttgacgacat attgagttcg cacaattacc cagagccagt tggtggtctc atgggggaat
      841 tgactgccat gaccgcagca ctagcagatt cgctcaaata cgatgggctg tttatcctcc
      901 aaactcagag cgatggcccg gtgagcatga tggtcgttga tgtcaccagt gacggcacca
      961 tacgcggtta tgcgcgctac gataaagaca gcttttatcg agacaccgaa atcaatactg
     1021 cggtgccgca cataatgggc agtggtcaca tcgcttttac cgtcgaccaa ggactagaca
     1081 ccgaacgcta tcagggcatc acaacacttg agggggcgag ccttgctgag tgcgcgcaat
     1141 cctacttccg ccaatccgaa caattggaga cggccctcct attggcggct gattcaacta
     1201 ccagacacgc tacagcctta atgatccaaa aaatgccgat gactggaaaa ggcgcagaac
     1261 aacgccgtaa tcttacgcca gaagaggacg atgaaagctg gcgcagtgcc gttatcttga
     1321 tgagttccat gacgacggcg gaattacttg atcccggcct tagttctttg gatttgctct
     1381 accggctata tcacgaaact ggcgtcagga tttataccag taagccgctt aagttccagt
     1441 gccggtgtac agaggaaaaa atttcagcga ctttggcatc attttcaccg gatgatttgg
     1501 cagacatgaa aaccgcaaaa ggcctaattg tcaccacctg cgaattttgc ctgaccgagt
     1561 ataattttga tgatgacgcc ttagccactc tgcgtgcatt aaacagtccc ggttaacttg
     1621 aaacactctt gttttttacc cctcctctat gccaccatgg cggcatgatg aaaaaaaacg
     1681 cttcccgttt atttggtttt tgcgccatcg cgctgctagc tgcctgccag gccaatttac
     1741 cctcagagca attaccggac atgactttca agcatttgtc gctgatccaa ttacgcgtca
     1801 tcgacattca attggtttcg aattttgagc gcagtgttga tgcacctcac gtcgctcata
     1861 aatttcccgt ttcaccggag aaagcgttga tccaatgggc cgaagaccgg ctgcaaattg
     1921 ccggccaaaa aaataccgcg cgctttacga tcttgcgcgc tgatgcccaa gagataccgc
     1981 ttaaacttga taaaagtttt aaaggcatgt ttaagaacca gcaatcggac cgctatgaca
     2041 cgtttattga agctcagatc gaaatcctgg atgaacgcaa cattcgccaa gcctccgtca
     2101 ccgccaaagc cgaacaatca attacggttt ccgaagcaac cccgctcacc gaccggcgca
     2161 agatttggta caatctggtt gaaaaactga tgatgaaatt caacaccgcg atcgaaaaca
     2221 gcattgtcaa taatttccaa ggttatttgt tctagcgtga aatattaaag gtaatcacta
     2281 aaaatgcgta tcccaattca tcccagagag ttact
//
LOCUS       DASCNL010000584         3128 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001213378, whole genome shotgun sequence.
ACCESSION   DASCNL010000584 DASCNL010000000
VERSION     DASCNL010000584.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001213378"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(58..447)
                     /locus_tag="QF359_07780"
     CDS             complement(58..447)
                     /locus_tag="QF359_07780"
                     /inference="COORDINATES: protein motif:HMM:NF018949.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HJO86844.1"
                     /translation="MKGLYSLIAIAEMSWVITAYNNAPAEIYWKPHNTFQHFTLSLML
                     ITIISIIAALTPINSDKKTDGPQGIYRVTRHPMIWGIALWSTTHVLANGELYALIFFG
                     GLTVLALAGTVQVDRRKACLEGKIWQA"
     gene            complement(578..1222)
                     /locus_tag="QF359_07785"
     CDS             complement(578..1222)
                     /locus_tag="QF359_07785"
                     /inference="COORDINATES: protein motif:HMM:NF018949.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HJO86845.1"
                     /translation="MIELIASIVVFILTHVIPAYGKLRQGLIERFGKRLYFILYSILS
                     WSIIVWLGFAFIGAPYIELWGQPDWTRWVPLLGMPIACILFIGGLLASNPLSLAIGKR
                     KFDPEQPGIIGLSHHPVMMAFALWALLHIVPNGDAASVLLFGLLMALSFYGPYALDKR
                     KKQNLGEEEWQRLAASKGNLSGSNGWVPGLFGGTAFYLLLIWGHEWVIGVSPLP"
     gene            1461..>3128
                     /gene="dnaG"
                     /locus_tag="QF359_07790"
     CDS             1461..>3128
                     /gene="dnaG"
                     /locus_tag="QF359_07790"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HJO86846.1"
                     /translation="MAFSPRFLDEVKNRIGLAEVVGRRVRLVKKGREHTGLCPFHNEK
                     TPSFTVNEDKGFYHCFGCGEHGSVFDFVMKTDSLSFPEAVERLATEVGLEIPVETPEE
                     RQRQERAKGLYDVMAAACAYYEKQLRMPEGKGALDYLFNRGITENSIEHFHLGFAADN
                     LGGLKAALARENISDQLMIEAGLLIQPDDPSRSPYDRFRGRVMFPITDRRGRIIAFGG
                     RILGVGEPKYLNSPETPLFHKGYNLYAFRQAVEAARQTGTILVTEGYTDVIALHQAGF
                     KHAVAPLGTALTEDQIKLMWRVVSEPVLCFDGDTAGQRAAGRAAERTLPILQPEKSLS
                     FVTLPEGEDPDSLIKAKGAQAIEEVLAQAVPLSEIIWRLETHGHRLTTPEDQAGFEKR
                     LRESTKRINDETVQKYYLNTFKRRLWDEFLKNQPKQGAKQGTKRYERQKPSVQMAEKS
                     GVSAQIDTIWIQQAILVATLINHPELFDTIGEQLGSLEFSASDLDKLRQEVLKTLASS
                     SGLEFQALQDHLIDTGFSKLMNGLLSRQVINHAHFARPDEHSDVARKG"
BASE COUNT          813 a          770 c          835 g          710 t
ORIGIN      
        1 gaaatgggtg cgtttagcga ggatggcggc aaagggaatg tgcgaacttt tggcggctta
       61 ggcctgccaa attttacctt cgaggcaagc tttgcgccgg tcaacttgaa ccgtgccggc
      121 aagtgccaga acggtgagac caccaaagaa aatcagggcg tataactcgc cattggccag
      181 cacatgcgtt gtactccaga gcgcgatgcc ccaaatcatt gggtgacggg tgacccggta
      241 gatgccttgc ggcccatccg tttttttatc tgaattgatc ggcgtaagtg ccgcgataat
      301 cgaaataatg gtgattaaca tcaagctgag ggtgaaatgt tgaaaggtgt tatgcggctt
      361 ccagtagatt tccgccggcg cattgttata ggccgtgatc acccacgaca tttcagcgat
      421 ggcaatgagt gagtagagac ccttgatttt ttacttgccg atcttctgaa tgatgagagt
      481 tcttaccggc agactcgaca tcgcgatgtg gctgaagata aaaacgacca tggcgattag
      541 caggtggctc actgttccgg tcatgttggt tcctttatta agggagcggt gagacgccga
      601 tcacccattc atgaccccat attagcaaaa gataaaacgc ggtgccgcca aaaagtcccg
      661 gcacccaacc gttacttcct gatagattgc cttttgaagc agccaaccgt tgccactctt
      721 cctcaccgag attttgcttt ttgcgtttat cgagcgcata gggtccataa aaactcaacg
      781 ccatcagcag gccgaataat aacaccgagg cggcatcgcc attggggact atgtgcagta
      841 gcgcccacag cgcgaaggcc atcatcaccg gatgatggct gagcccgatg ataccgggtt
      901 gctcggggtc gaattttctt ttgccgatgg cgagcgacaa tgggttgctt gccagtaagc
      961 cgccgataaa caatatacag gcaattggca tgccgagcag aggcacccag cgggtccagt
     1021 ccggctgccc ccagagctcg atatagggcg cgccgataaa agcaaagccg agccagacaa
     1081 tgatgctcca gctcaggatc gaatatagaa tgaaataaag tcgcttgccg aaccgttcaa
     1141 tcagcccctg gcgcaactta ccgtaggcgg gaatgacatg ggtcaggata aaaacaacga
     1201 tggacgcaat aagctcgatc atggcctagt gataagggag ttgacgctta aggaaaagcg
     1261 ggaattcacc acagagttca cagagaacac ggagacttca ttcatttaaa tcgtcacccg
     1321 ggatcaagtc cggggtgacg aggtagcggt ttttaatcac ttgtggataa catattgaaa
     1381 acggggaaaa ttagtcaaat tagcgtctcc tcttatacca tcatctccgc tattattggc
     1441 aacgtaatat tgggagtggt atggcttttt cacctcgttt tttggacgaa gtaaagaaca
     1501 gaattggctt ggctgaagtg gttgggcggc gtgtgcgcct ggtcaagaaa ggccgcgagc
     1561 ataccgggtt gtgtccattc cacaatgaga aaacaccgtc tttcaccgtc aacgaagata
     1621 aaggctttta ccactgcttc ggttgcggcg aacatggcag cgtctttgat tttgtcatga
     1681 aaaccgacag cctatccttc ccagaagcgg tggaacggct ggctactgaa gtaggtttgg
     1741 aaattccggt tgagacgcct gaagaacgcc agcgccaaga gcgcgccaaa ggtctttacg
     1801 atgtcatggc agcggcgtgc gcttattatg aaaagcagct gcgtatgccg gaaggtaaag
     1861 gtgcgttgga ttatcttttt aatcgcggca taacggaaaa ctcgatcgaa catttccact
     1921 tgggcttcgc cgctgataat ctgggcgggc tcaaggcggc actcgcgcgc gaaaatattt
     1981 ccgatcagtt gatgatcgaa gccgggctgt tgatccagcc ggatgatccc tcccgctcgc
     2041 cctatgaccg gttccggggc cgggtgatgt tcccaatcac cgaccggcgg ggtcgcatca
     2101 ttgctttcgg cgggcggata ctaggtgtgg gtgagccgaa atatctcaac tcgccagaaa
     2161 ccccattgtt ccataaaggc tataatcttt atgcttttcg ccaggccgtg gaagcggcgc
     2221 gccaaaccgg caccatcctc gttaccgaag gctataccga tgtcattgcg ctccatcagg
     2281 caggtttcaa acacgcggtg gcgcctttgg gcacggcgct gaccgaagat cagatcaaac
     2341 tgatgtggcg ggtggtttcg gaaccggtgt tgtgttttga tggtgatact gccggtcaac
     2401 gagctgccgg tcgagccgcc gagcgcactt tgccgatcct ccagccggaa aaaagtttaa
     2461 gctttgtcac tttgccggaa ggtgaagacc cggacagtct gattaaagcc aagggcgcgc
     2521 aagcaatcga agaagtatta gctcaagcag tgccgttatc tgaaataatc tggcggctgg
     2581 aaacccacgg gcatcgcctg accacaccgg aagaccaggc cggtttcgaa aaacgtcttc
     2641 gcgagtcaac caaacgcata aacgatgaga cggtacaaaa atattatcta aatacgttta
     2701 aacgccgact ctgggatgaa tttctcaaga atcagccaaa acagggtgcc aaacagggaa
     2761 ccaaacgcta cgaacggcag aaaccttcgg tgcaaatggc cgaaaaatca ggtgtttctg
     2821 cgcaaattga cacaatttgg atacaacaag ccatattagt tgccacttta atcaatcatc
     2881 ccgagctgtt tgacaccatc ggcgaacagc ttggaagcct tgaatttagc gcctcagatc
     2941 ttgacaagct acgtcaagaa gtattaaaga ctctggcttc gtcctcagga cttgaatttc
     3001 aggctctgca ggaccattta atagataccg ggttttccaa gctgatgaac ggccttttga
     3061 gccgacaggt tataaaccac gcccatttcg cccggccaga tgaacatagt gatgtcgcca
     3121 ggaaaggc
//
LOCUS       DASCNL010000585         3977 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001215536, whole genome shotgun sequence.
ACCESSION   DASCNL010000585 DASCNL010000000
VERSION     DASCNL010000585.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3977)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3977)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3977
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001215536"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            159..2099
                     /gene="ftsH"
                     /locus_tag="QF359_07795"
     CDS             159..2099
                     /gene="ftsH"
                     /locus_tag="QF359_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HJO86847.1"
                     /translation="MNFRKNLALWVIIALLIFTLFNMFQGSPNKGPHQSLAFSDFIGA
                     VDSGDVRDVTIQGKKVTGHYGDGREFRTYLPDDPSLIPNLSKKGVHIKAVPTEDELSI
                     FGILISWFPMLLLIGVWIFFMRQMQGGGGKAMGFGKSKAKLLTEKTGRITFEDVAGID
                     EAKQELEEIVDFLKDPAKFQRLGGKIPKGCLLVGPPGTGKTLLARAIAGEANVPFFTI
                     SGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDELDAVGRHRGAGLGGGNDEREQT
                     LNQMLVEMDGFETNEGVILLAATNRPDVLDPALLRPGRFDRQVVVPNPDIVGREKILK
                     VHLRKVPVAPDVDAKVIARGTPGFSGADLANLVNEAALLAARTGGRMVTMANFEASKD
                     KVMMGAERRSMVMTDDEKALTAYHEAGHAIVGINVPKHDPLHKVTIIPRGRALGVTMS
                     LPERDKYSYSKLELKSKLAVMFGGRLAEEITFGEENVTTGAGNDIQQATEMARRMVTE
                     YGFSDKLGRLRYTDNDEEIFLGHSVARHKNVSDATARLIDEEVRRLIEEAEDVANKIL
                     AEKANDLEQLAQALLEYETLSGSEVDALLKGEAIFRPDLDDDHSEGHAKSSVPSSGAA
                     AKKDQYKDTDSGDFTPKPQPEG"
     gene            2109..2909
                     /gene="folP"
                     /locus_tag="QF359_07800"
     CDS             2109..2909
                     /gene="folP"
                     /locus_tag="QF359_07800"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HJO86848.1"
                     /translation="MRSFANLSLDHLLIMGIVNVTPDSFTDGGEFLDVASAIDHGKKL
                     LADGADILDIGGESTRPGAVPVSSKVEAGRVLPVIEGLAKTGAVISIDTRHADVMTRA
                     LDAGAVILNDVSALEGEGSLAVAAKSDAAVVLMHMQGEPATMMDNPTYKDVVGEVSRY
                     LGTRIDACVDAGIDKARIAIDPGFGFGKTRDQNLKLIDNLDQFKELGCPILVGLSRKF
                     GRHKKLHERLPESFAVAVKSVHNGAEILRVHDVAETRDALSALHVEGA"
     gene            3003..>3977
                     /gene="glmM"
                     /locus_tag="QF359_07805"
     CDS             3003..>3977
                     /gene="glmM"
                     /locus_tag="QF359_07805"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HJO86849.1"
                     /translation="MIRKLFGTDGIRGTANLEPMTAETALNVGMAAGLHFTRGDYRHR
                     VVISKDTRLSGYMIEPALTAGFVAAGMDPILVGPMPTPAVAMLTRSLRADLGVMISAS
                     HNPFQDNGIKLFGPDGYKLSDEVELEIETRIDGDMNGDLATPEKLGRALRLDDAQGRY
                     IEFVKRTFPRGLTLDGLKVVVDCANGAAYKVAPTVLWELGAEVIPVGVDPDGYNINSG
                     CGSTATEFMQSQVAAHGADIGIALDGDADRVLVSDEYSKLVDGDQIMAAVAEYWAREG
                     RLTGGGVVATVMSNLGFERFLQEFKLSLIRTKVGDRYVVEHMRANGFNI"
BASE COUNT          948 a          919 c         1104 g         1006 t
ORIGIN      
        1 ctaagaatct ttctaattaa cctggaaata gggcgataat tcgtgtaggg aactctctta
       61 gacctcttga gattgttgaa ttacgtacta tctcatataa ttagagtgtc tattgtatca
      121 atcaccttgt ggcggtttca ttagggaagg gaaataagtt gaatttccgg aagaatttgg
      181 ccctttgggt cattatagcg ttgcttatat ttacgctgtt taatatgttt caaggctcgc
      241 ccaataaagg cccgcatcaa tccttggcgt tttccgattt tatcggcgcg gttgatagtg
      301 gcgatgtgcg agatgttacc attcaaggca agaaagttac cggtcattat ggtgatggcc
      361 gcgagttccg cacctatctg ccggatgacc cgtcgctgat tcctaatctg agcaaaaagg
      421 gcgttcatat taaggccgtc ccaaccgaag atgaactatc gatatttggt attctgatct
      481 cctggttccc gatgcttttg ctgataggtg tctggatttt cttcatgcgg cagatgcagg
      541 gcggtggcgg caaagccatg ggcttcggta aatcaaaagc caaattactg accgaaaaaa
      601 ctggtcgtat cacttttgaa gacgttgccg gtattgatga agccaaacag gaacttgaag
      661 aaattgttga ttttctcaaa gatcctgcca agttccaacg cctcggcggg aaaattccaa
      721 aaggctgctt gctggtcggt cctccaggta ctggtaaaac tttgctggcg cgggcaatcg
      781 ccggtgaagc taatgtgcca tttttcacga tttccggttc tgactttgtt gaaatgtttg
      841 tcggtgtggg cgccagccgg gttcgcgata tgtttgaaca aggcaaaaag aacgcgccgt
      901 gcattatctt tattgacgag cttgatgcgg tcggtcgcca ccgtggcgct ggtctcggcg
      961 gcggtaatga tgagcgtgag caaacactca atcaaatgtt agtcgagatg gatggcttcg
     1021 agactaatga aggcgtaatc ttgctggcgg caaccaaccg tcccgatgtt ctagatccgg
     1081 cactgctccg tcctggccgc tttgaccgtc aagtggttgt gcccaatccg gatatcgtgg
     1141 gtcgggaaaa aattctcaaa gttcacctgc ggaaagttcc ggtggcaccc gatgtcgatg
     1201 ccaaggttat tgcccgtggc acacctggat tctctggcgc tgatcttgcc aatttggtca
     1261 atgaagcagc gctgttggca gcgcgtaccg gtggccgcat ggtcaccatg gctaactttg
     1321 aagcatcaaa agacaaagtt atgatgggag ccgaacgccg ctccatggtg atgacggatg
     1381 atgaaaaagc actgaccgct tatcacgaag ccggccatgc cattgttggc atcaatgtgc
     1441 cgaaacatga tccgctccat aaagtaacca tcataccccg tggccgtgct ttgggtgtga
     1501 ccatgtcgtt gccggaacgt gacaaataca gttattccaa gcttgaactt aaatccaagc
     1561 tggcggtgat gttcggtggc cggttggccg aagaaattac ttttggtgaa gaaaatgtca
     1621 ccacaggcgc cggcaatgat attcagcaag caaccgagat ggcccgccgc atggttaccg
     1681 aatacggctt tagcgataag cttgggcggc tccgctacac tgataatgat gaagaaattt
     1741 tcctcggcca ttccgtggcg cggcataaaa atgtttccga tgcgacggcc agattgatcg
     1801 atgaagaagt gcgtcgtttg attgaggaag ccgaagacgt tgcaaataag attttagctg
     1861 agaaagccaa tgatcttgag caactggcgc aagccttgct ggaatacgaa accctgagcg
     1921 gtagtgaagt cgacgcgctg ctgaaaggtg aagcgatttt ccggcccgac cttgatgatg
     1981 accattcaga aggacacgcg aaatcatccg tgccgtcaag cggagcggca gcgaaaaaag
     2041 atcagtataa agacaccgac agtggcgatt tcacacctaa gccgcaacct gaaggttaaa
     2101 tctttttggt gcgcagtttc gccaatttgt cgctagatca cctacttatt atgggcattg
     2161 taaatgtcac ccctgacagt ttcactgacg ggggtgagtt tcttgatgtt gcttcggcaa
     2221 tcgatcacgg taaaaaacta ttggcagatg gtgcggatat tctcgatatc ggtggcgagt
     2281 cgacacgtcc cggcgcagtt ccggtcagct caaaagtaga agccggccgc gtgctgccgg
     2341 ttattgaagg gctcgccaag accggtgctg tcatctcaat cgatacccgc cacgccgatg
     2401 ttatgaccag agccctggac gccggtgcgg tgatcctcaa tgatgtatca gcactggaag
     2461 gtgagggttc tctcgcagtt gcggccaaga gcgatgccgc tgttgtgctg atgcatatgc
     2521 aaggtgagcc cgccacgatg atggataatc cgacctacaa ggatgtcgtc ggcgaggtca
     2581 gtagatattt aggcacgcgc atagatgcct gcgttgatgc cggtattgac aaagcgcgga
     2641 tcgcgattga tccaggattt ggatttggta agacgcgaga tcaaaatctt aaactcatcg
     2701 acaatctgga tcagtttaaa gaacttgggt gcccgattct agttggtttg tcgcgcaagt
     2761 tcggtaggca taaaaaactg catgaacggc tgcccgaatc atttgccgtt gcggtaaaat
     2821 ctgttcacaa cggtgctgaa atcctccgcg tccatgatgt cgctgagacc cgcgacgccc
     2881 tttctgcact tcatgtagaa ggggcgtaaa atactgcaat aaaaagttag gtgacgctgg
     2941 gtcgagacta tattagaagt gtctcagcgt gagcgcttta attctccgat tgataaagat
     3001 agatgatacg caaactattt ggaactgacg gtatccgcgg caccgcgaat ttggaaccga
     3061 tgacggccga gaccgccctt aatgtcggca tggcagctgg gctgcatttc acccgtggcg
     3121 attaccgtca ccgcgtagtg atcagcaagg atacacggct gtccggatat atgattgagc
     3181 ccgccttaac ggcaggattt gttgctgccg ggatggatcc cattttggtc ggccctatgc
     3241 cgacaccggc tgttgcgatg ctcacccgca gcttgcgcgc tgatctcggg gttatgatct
     3301 cggcgtcgca caacccgttc caggataacg gcattaagct tttcggaccc gatggctata
     3361 aactttcgga tgaggttgag ctagaaattg agacccgcat tgatggtgat atgaacggcg
     3421 atttggctac tccggaaaaa cttggccgcg ctcttcgtct cgatgatgcc caaggccgct
     3481 atatcgagtt tgtaaaacgt acattcccgc gcggtttaac gctcgatggt ttgaaggtcg
     3541 ttgtcgattg cgctaacgga gcggcttaca aggtcgcgcc gacggtgctg tgggagcttg
     3601 gtgccgaagt gataccggtc ggtgtcgatc cggatggcta caatatcaat tccggctgtg
     3661 gttcaacagc gaccgaattt atgcagtcgc aagtggcggc tcatggagcg gatatcggca
     3721 ttgcgctcga tggtgacgct gaccgcgtat tggtatcgga cgagtatagc aagctggttg
     3781 atggtgatca gattatggcg gctgttgccg aatattgggc gcgggaaggc cggctgaccg
     3841 gtggcggcgt tgttgcgacg gtaatgtcca atcttggctt tgaacgcttt ttgcaagaat
     3901 ttaaactttc acttatccgg acaaaggttg gcgatcgtta cgttgtcgag catatgcgcg
     3961 ccaatggctt taatata
//
LOCUS       DASCNL010000586         3117 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001219452, whole genome shotgun sequence.
ACCESSION   DASCNL010000586 DASCNL010000000
VERSION     DASCNL010000586.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001219452"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="QF359_07810"
     CDS             <1..816
                     /locus_tag="QF359_07810"
                     /inference="COORDINATES: protein motif:HMM:NF013618.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HJO86850.1"
                     /translation="TYYGQLAAAKKSTDKHIQFPPSPVNGSKDAEKFEADEIVSVVRV
                     LASAGLFDLLRPFIRKLNKEDASPAWRVNVAKLARQSGRPDLAIYTAKQAYRDGITLA
                     EEGYPVLLISEKSTMDTALLHALIRQESAFNIKAVSHAGARGLMQIMPATAKRVAKKY
                     KLPYRRKNLTTDMEYNLQLGQAYLSGLLEQYNGSYVLSLAAYNAGLKRANRWIKRNGD
                     PRDKNVDAIDWVEMIPFRETRNYVQRVIENLHVYRKRLNQNEIAFDPEGDLRR"
     gene            829..1815
                     /locus_tag="QF359_07815"
     CDS             829..1815
                     /locus_tag="QF359_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HJO86851.1"
                     /translation="MPSIPTISDVEAAAQRLTGYAVQTPVLESERINDQLGCRLLIKA
                     ECLQRTGSFKFRGAFNMISGLSDEERSQGVVAFSSGNHAQGVAAAAKILGIKASIVMP
                     ANAPQIKIDNTRGDGADVILYNRADGNRVAIAKNIIAETGATLVPPYNAPEIMVGQGT
                     LGLELFQQTKDRSVCLDYLLGPCSGGGMISGSAIVFNDRSHSTKIYTVEPVGYDDTAL
                     SLAKGERVKIEPGTPSFCDALLLETPGETTFAVNNELLAGGLVVSQAETAVAMKTAFR
                     EYKIIVEPSGAVALAAALSGKINTQDKTVGIICTGGNVDATTFKDVLNGEYD"
     gene            complement(1812..2282)
                     /locus_tag="QF359_07820"
     CDS             complement(1812..2282)
                     /locus_tag="QF359_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HJO86852.1"
                     /translation="MFTKGTKEDEKNLVPKVSSPPSLLSTGLTVTGNLHSDGEIQIDG
                     RVEGGIHSDVLIVGETAQVNGEITAESVRVHGHVTGQIKATSVSLAKTAHVLGDILHG
                     NLAIEQGAFLEGHCRRVESDKKSGEDTINLQVKEESKNKPEHPPKKSIAEPVKA"
     gene            complement(2263..>3117)
                     /locus_tag="QF359_07825"
     CDS             complement(2263..>3117)
                     /locus_tag="QF359_07825"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF039598.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HJO86853.1"
                     /translation="LENEMKELNSHNFNLKGNLNSVTTDLESALSQRNFVRSQSKKLS
                     RTVAKLENDLETLHKSEKDILINLTERTKSSIDDIHFVLKHTGLKVAQLLKGNQDRSK
                     KKLGQGGPFIAFAPDTEPAQRLKANLSNLNSQLQQFTELQDIMKRLPLAAPLDYFSIS
                     SHYGKRRDPINKRWAVHYGMDFGGLKHASVYVTAPGRVRYAGRKGKYGKLVEIDHGLG
                     FRTKYGHLHKILVKRGQKVNYRTKIGLMGSSGRSTGPHLHYEVIVKGKHKNPWRFIKA
                     GRYVYKRH"
BASE COUNT          819 a          739 c          711 g          848 t
ORIGIN      
        1 acctattatg gccaacttgc ggctgctaaa aaatctactg ataagcatat ccagtttccg
       61 ccctcgccgg taaacggcag caaagacgcc gaaaaatttg aagcagatga aatagttagc
      121 gtcgttcgag tgctcgccag cgcggggctt tttgatcttt tgcgaccttt catacgcaaa
      181 ctcaataaag aagatgcgtc accggcgtgg cgagtgaacg ttgccaaact ggcccggcaa
      241 agcggacgtc ccgaccttgc gatctacacg gccaaacaag cttaccggga tggcattacg
      301 ctcgccgagg aaggatatcc agttttgctg atttcggaaa aatcaacaat ggatacagca
      361 ctcctgcatg ctctcatccg ccaggaaagc gcctttaata ttaaagccgt cagccatgcc
      421 ggagcccgcg gtctcatgca aattatgccg gcaacagcca agcgagtggc gaaaaagtat
      481 aaactaccct atcgccgaaa aaacctaaca accgatatgg agtacaatct ccaactcggt
      541 caagcctatt tgtcaggact tcttgagcaa tataacggct cttatgtatt gtccttggcg
      601 gcttataatg ccgggcttaa gcgggctaat cgctggatca agcgcaatgg tgatccgcgc
      661 gataaaaacg ttgatgccat agattgggtc gaaatgatcc ccttccgtga gacccgcaat
      721 tacgtccagc gcgttatcga aaatcttcat gtctatcgca agcgcctcaa tcaaaacgaa
      781 attgcgtttg atcctgaagg tgatttacgg cgctaggagt caaaaacatt gccatccatc
      841 cccactatca gcgatgttga agctgcagcg caacgcctga ccggctatgc cgtccaaaca
      901 ccggttctag aatccgaacg gataaatgat cagcttggct gccgcctttt gattaaagcg
      961 gaatgcctgc aacgcacggg ctctttcaaa tttcgtggtg ccttcaatat gatttccggg
     1021 ctctcagatg aagaaagatc acagggtgtt gtcgcatttt catctggtaa tcatgcgcaa
     1081 ggtgtagcgg cagcggctaa aatactcggt attaaagcaa gcattgtgat gccagcaaat
     1141 gcgccacaaa taaagatcga taatacgcga ggcgatggtg cggatgtcat actctataac
     1201 cgggcagacg gtaaccgggt ggcgattgcc aaaaatatca tcgctgaaac cggagctaca
     1261 ttggtaccac cgtataacgc ccctgaaatc atggtcggtc agggcacact tggtctcgaa
     1321 cttttccaac aaaccaagga taggagcgtt tgcttggatt atttgctcgg tccttgcagc
     1381 ggcggcggta tgattagcgg ctcggctatc gtttttaatg atagatctca tagtaccaaa
     1441 atctataccg tcgaacctgt tggttatgac gataccgctt tatctttggc aaaaggtgaa
     1501 cgcgtaaaaa ttgaaccggg cacgccatca ttctgtgatg cgctgttgtt ggaaacaccg
     1561 ggtgaaacaa cttttgccgt caataatgaa ttactcgcag gtggcttagt cgtcagccag
     1621 gctgagactg ccgtggcgat gaaaaccgcc tttcgagaat ataaaattat tgttgaaccc
     1681 agtggcgccg tcgctttagc cgcagcttta tcaggaaaaa taaatactca agacaaaacg
     1741 gttggcatta tttgtaccgg cggtaacgtt gacgccacca ctttcaaaga cgtgctaaat
     1801 ggggaatatg actaggcttt taccggttcc gctatcgatt tttttggcgg atgttcaggt
     1861 ttattttttg attcctcttt aacctgcaga tttattgtat cttcacccga ttttttatcg
     1921 gattcgacgc ggcggcaatg gccttctaag aaagcacctt gctcaatggc cagattgcca
     1981 tgcagaatat ctcctaacac atgtgcagtt tttgctaaag agacggaagt cgccttgatt
     2041 tgaccagtga catggccatg aacacgtaca ctttccgcgg taatctcgcc gtttacctga
     2101 gcggtctcac caacaattaa aacgtcagaa tggataccac cttcgactct accatcaatt
     2161 tggatttcac cgtcgctatg aagattacct gtgactgtaa gacccgtgct caaaagtgac
     2221 ggaggagatg atactttagg aacgagattc ttctcgtctt ctttagtgcc ttttgtaaac
     2281 atatcttccg gccttgatga atcgccaagg atttttgtgt ttacctttca ctataacttc
     2341 atagtgaagg tgaggcccag tactacgacc agaactcccc atcaatccta tcttggtgcg
     2401 ataattcact ttttgaccgc gtttaacaag aatcttatgc aaatgaccat atttcgttct
     2461 aaatccaaga ccgtgatcaa tttcgactaa ttttccgtat ttgccttttc gtcccgcata
     2521 tcgcactctt ccaggggccg tcacatagac ggaagcgtgc ttcaagccgc caaaatccat
     2581 gccataatga accgcccagc gtttattgat tgggtcacgg cgcttgccgt aatgactcga
     2641 aatactgaaa taatccaatg gggctgcgag cgggagacgc ttcattatat cttggagttc
     2701 agtaaattgc tgaagctgcg aattgagatt actgaggttg gctttcagac gttgggctgg
     2761 ctccgtatcc ggcgcgaagg cgataaatgg accgccctgc cctaactttt tctttgacct
     2821 gtcttgattt cccttcagca actgagcaac ttttaaaccg gtgtgtttta aaacaaaatg
     2881 aatgtcatcg atgcttgatt tggtacgctc ggtcaaattt ataagaatgt ctttttccga
     2941 tttatggaga gtttcaagat cattttctag ttttgccaca gtccgtgaaa gctttttgct
     3001 ttgagaacgg acaaaatttc tttgtgataa tgcactttcg agatcggtcg taacggaatt
     3061 tagattgcct ttgagattga agttatggct gttcaactcc ttcatctcat tttctag
//
LOCUS       DASCNL010000587         2437 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001219635, whole genome shotgun sequence.
ACCESSION   DASCNL010000587 DASCNL010000000
VERSION     DASCNL010000587.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001219635"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2407)
                     /locus_tag="QF359_07830"
     CDS             complement(<1..2407)
                     /locus_tag="QF359_07830"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO86854.1"
                     /translation="MNWKSMLNSPDRLLYPMKRVDFDPNGERNPQNRGISGYERISWD
                     EALDMVAGEIKRIKKEHGPGAIANSHGSHHTWGNVGYYLSADFKFINTVGMTRVLHNP
                     DSWEGWYWGASHHWGGSLRVGQTETYGTVEDLLKEAEMVVFWSSNPEGTSGAYGSLEG
                     TVRRKWLKELDIDIVHIDPYYNDSAQFLGGKWLAPKPASSPALAMAIANVWMEEDLYD
                     KDYVKDRTTGFDKWHDYIMGKEDGIAKTPEWAEPETGLKAKEIRALARKWGNRKVYLA
                     AGGWGNGHGGACRNQTGIQWARSLVCLMAMQGLGKPGVNMGNLQWGTPVDTNFYFPGY
                     AEGGISGDIHHTAMSVELYQRMPQLPSMNTVEQTIPRLWLPEAIIEGKAEGYAWDGKS
                     IEAQFNKISYPKPGYSPVRMLYKIGGSLISTMADSNRHVKMYQSENLEFCVSQAIWNE
                     GETKFADIILPACTNFERPDISEWAALGGYAFHGQTQLNSRVVVFQHKAIKPMGESKS
                     DYVIFSEICERLGLSAYFTEGISELDWAKRMFDGSDLPQIISWKEFIRKGYVVIPPER
                     EELRDPVSWNWYYEDRKKDVPEPMPLPSDYKDEYLKGIQTQSGKIEFEALSLKRFDAN
                     DPERPPVVKYNNPYNGPEAEKYPLLMITPHPRFSFHTQGDGKDTFVNDIKDHRVEVDG
                     YFYWIIRINTEDAAERGIKMHDLVKVHNDQGAVVCAALVTQRLPRGAVHSYESCAIYE
                     PLGEPGNSVDRGGILNLLTPKKSQIKKGHSMGNSTALVEIELWDGKAEHNITASVAAP
                     EKEP"
BASE COUNT          545 a          660 c          609 g          623 t
ORIGIN      
        1 ccggttcttt ttccggtgcc gctacgctgg cagtgatatt gtgctcggct ttaccatccc
       61 aaagttcaat ctcgaccaat gcagtcgaat tacccattga gtggcctttc ttaatctgcg
      121 attttttcgg cgtcagtaag ttcaagatac cacctcgatc aaccgaatta ccgggttcac
      181 cgagcggctc atagatggcg caggattcat agctatgcac cgcgccgcga ggcaggcgtt
      241 gggtaaccag tgcggcgcaa acgactgcgc cctgatcatt atggaccttg accaaatcgt
      301 gcatcttaat gccgcgttcc gccgcatctt ctgtgttaat ccgaataatc caataaaaat
      361 agccgtcgac ttcgacccgg tggtctttga tgtcgttgac gaaggtatcc ttaccatcac
      421 cctgagtatg gaaggaaaag cgcgggtgcg gggttatcat cagcagcgga tacttctcgg
      481 cttctggacc gttgtatgga ttattatact tcaccaccgg tgggcgttcc ggatcattgg
      541 catcaaagcg cttcagactt aaagcttcaa actcaatttt acccgattgg gtctggatgc
      601 ccttgagata ctcgtcttta tagtcggacg gtagcggcat tggttccggc acatcctttt
      661 tgcggtcttc atagtaccag ttccaggata ccggatcacg cagctcttca cgctccggcg
      721 ggatgacgac ataacctttg cggataaatt ctttccacga aataatctgc ggcagatcag
      781 agccatcaaa catgcgtttt gcccaatcta gctcagagat accttcggtg aaatacgcgc
      841 tgaggcctaa gcgttcgcaa atttccgaga aaatcacata atcggattta gactcgccca
      901 tcggcttaat tgccttgtgc tggaagacga ccacccggct gttgagttga gtttgaccat
      961 ggaaggcata gccgccgaga gccgcccatt cactgatgtc agggcgctcg aagttggtgc
     1021 aggcaggcag aatgatatca gcgaactttg tttctccttc attccagatc gcctggctaa
     1081 cacaaaactc aagattctcc gattgataca ttttcacatg acggttggaa tccgccatcg
     1141 tgctgatcag cgagccacca atcttataga gcattctaac cggtgagtaa ccgggcttcg
     1201 gataggagat tttgttgaac tgggcttcaa tgcttttacc atcccaggca tagccttcgg
     1261 ccttaccctc aataatcgct tccggcagcc aaagccgggg gatggtttgc tcaactgtgt
     1321 tcatgctcgg gagttgcggc atccgctgat aaagctcaac cgacattgcc gtatgatgta
     1381 tatcgccgga tatgccacct tcggcgtaac ccgggaaata gaaattagta tcaaccggtg
     1441 taccccattg cagattgccc atattgacac cgggtttgcc gagaccttgc atcgccatca
     1501 ggcagacgag tgagcgcgcc cattggatac cggtttgatt gcggcaggcg ccgccgtgac
     1561 cgttgcccca gccaccggca gcgaggtaaa ccttacggtt gccccattta cgggccagcg
     1621 cgcggatttc tttggctttc agaccggttt ctggctccgc ccattcagga gttttggcaa
     1681 taccgtcttc tttacccata atatagtcgt gccacttatc gaaaccggta gtacggtctt
     1741 tgacgtagtc tttgtcgtag aggtcttcct ccatccagac attggcgatg gccatcgcca
     1801 gtgccggtga tgaggccggt ttcggcgcca gccacttgcc gccgaggaac tgcgctgaat
     1861 cattataata cggatcgatg tggacaatat cgatgtcgag ctctttcagc catttacggc
     1921 gaaccgtgcc ttcaagcgag ccataagcgc cgctggtgcc ttccggatta ctggaccaaa
     1981 agacaaccat ttcggcttct ttaagcaaat cttcgacggt accgtaagtt tcggtttggc
     2041 caacgcgcag cgagccgccc caatgatggg acgcgcccca ataccagcct tcccaactat
     2101 ccggattatg taatacgcgg gtcatgccga ccgtattgat gaatttaaaa tcggcgctca
     2161 gatagtagcc gacattaccc caggtatgat gcgaaccgtg agaattggca atggcgccgg
     2221 gtccatgttc tttcttaata cgtttgattt cacccgcgac catatcgagc gcttcatccc
     2281 agctaatgcg ttcatagccg gagatgcccc ggttttgcgg attacgttcg ccatttggat
     2341 caaaatcgac ccgcttcatc ggataaagca gccggtccgg tgaattgagc atgcttttcc
     2401 aattcatgcc gtgcggtgcc agcgtggttt tgcgcgg
//
LOCUS       DASCNL010000588         4389 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001220771, whole genome shotgun sequence.
ACCESSION   DASCNL010000588 DASCNL010000000
VERSION     DASCNL010000588.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4389)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4389)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4389
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001220771"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1779
                     /locus_tag="QF359_07835"
     CDS             <1..1779
                     /locus_tag="QF359_07835"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO86855.1"
                     /translation="KRSNSKRKPAQLDGAKLAILANRFGGICSKMGNTLLRTGRSGVL
                     NRAKDFSCCIVTRDCELLHAEESLPIHVLSGPDLMAKSMHEFHPDLKAGDVFLHNSPY
                     HGDSHPADHTLLMPVIDKKGMHQFTLLAKAHQADIGNSISTTYHGTARDVYEEGALIF
                     PAVKVVENYEIKEDIVRMCRMRIRVPDQWYGDFLAMLGAAFIGEREMLTLGEELGWKS
                     LHAFTDQWFDYSEGRMVAAIKKMPHGKGSAKSTHDPIPGTPDDGITILSKVSVDTKKA
                     IIEVDLRDNPDQLSCGLNVSEACTRTSAMIGIFNSVDPSVPKNAGAFRRVKLQLKDGG
                     VVGIPRHPISCSASTTNLADRVQNSTQRALAAIGDPLGMGEIGCFCPPSTSVVSGTDP
                     RNGKPYVNQLFLGHTAGGAVAYQDAWLTMLHAGNGGMCFIDSVELDEIYTPIIVKTRR
                     LILDSEGAGRFRGAPGIEVELGPVNCRMEAGFVADGNINNPKGARGGGDAARSDQFRR
                     RKNGKMERLDQCSQVWIEDGEMMLSIACGGGGYGNPKARDPERVLHDVEEGLVSRKRA
                     REIYSVSITAANKIDLNKTKELRRRK"
     gene            1815..2576
                     /locus_tag="QF359_07840"
     CDS             1815..2576
                     /locus_tag="QF359_07840"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HJO86856.1"
                     /translation="MRLKDKIAIVTGSSMGIGEAIAKRYAAEGATVAVNYFKSPDAAD
                     GVVKAIEDAGGNAKAYKADVSKIPEIKRFSGEVINDFGRVDILVNNAGVFRTVPVMET
                     TEDIWDEQLDLNLKGYFFFVKTLLPHWRETGGGKVVSISSIAGTGGFPNCPAYCASKG
                     GVVNMTRALAAELGKENINVNSIAPGNVATPLNAHVRGPDNEEYVELMKIFTPTGIAF
                     LDPEDMTGTAVFLASDDAKLIHGETIIVDGGWSVW"
     gene            2573..3355
                     /locus_tag="QF359_07845"
     CDS             2573..3355
                     /locus_tag="QF359_07845"
                     /inference="COORDINATES: protein motif:HMM:NF009466.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86857.1"
                     /translation="MSSDGVLAGQSAIVTAGASGIGRAIAECLIAAGAAVHICDVSYE
                     HLNTAKTSVSGLTGSLADVSKPAEVEQLFDDALAQMGGLDILVNNAGIGGPRAEVADI
                     TYDEWDQTIAVNLNGMFYCIKNAASKMVEQKSGCIINISTASVRTGLPMRTAYVTAKQ
                     GVMGLTQNLARELGPSNIRCNAILPGLIDNERGRSIVSNYARENKTSTEKAEADFLKY
                     ISMKSWINPSEIGDTVVFLASNAGRHISGQFIAVDGNFEWEA"
     gene            3365..3703
                     /locus_tag="QF359_07850"
     CDS             3365..3703
                     /locus_tag="QF359_07850"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJO86858.1"
                     /translation="MSAKACDWLGKRAENSDDRPWMLFVSFIAPHFPLIVPREYFDLY
                     PLDQIPPIKPANAELADHPWWRAFNNCYTFDRYFKVDEQRRVAIASYLGLCTFVDELI
                     DNGNLYNFFV"
     gene            3833..>4389
                     /locus_tag="QF359_07855"
     CDS             3833..>4389
                     /locus_tag="QF359_07855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HJO86859.1"
                     /translation="MTKKTAKKAPKKSRYRTVKAYKNEEFLNSCNARSLRIQAEYLEP
                     ETRFEKFNVKDTIVFFGSARTKSRSQAQKALRQARKSSAPSKQIVRAERDLKMSRYYE
                     EARELSKRLTKWSKDLNNEGDERRFVICTGGGPGIMEAANRGASEAKGLNIGLNISLP
                     FEQHENPYITHHLGFEFHYFFMRKF"
BASE COUNT         1137 a         1050 c         1128 g         1074 t
ORIGIN      
        1 aaacgttcca acagcaaacg aaaaccagcg caactcgatg gcgctaaact ggcgatcctc
       61 gccaatcggt ttggtggcat ctgttcaaag atgggaaaca cattgttgcg cacaggccgg
      121 tccggcgtcc ttaaccgcgc caaagatttt tcgtgttgta tcgttacccg ggattgtgag
      181 cttcttcacg ccgaagaaag cttgcccatt catgtgctgt cgggccctga tctgatggca
      241 aaatcgatgc atgagtttca tcccgacctt aaagccggtg acgtgtttct ccataattcc
      301 ccttatcacg gagattctca cccggcagat cacacactcc tcatgccggt gattgataaa
      361 aaaggtatgc atcaattcac actactggca aaggcccatc aggctgatat tggtaactct
      421 atctcaacta cctatcacgg tactgcccga gatgtttatg aagaaggtgc attgattttc
      481 ccggccgtca aagtggtcga aaactatgaa ataaaagaag acatcgttcg catgtgccga
      541 atgcggatta gggttcctga tcaatggtat ggagattttc ttgccatgct gggtgctgca
      601 tttataggtg agcgcgaaat gttgacgctt ggagaagaat tgggctggaa atcgttacat
      661 gcctttacgg accaatggtt tgattattcc gaagggcgca tggttgcggc gatcaaaaaa
      721 atgccacatg gcaaaggctc cgccaaatcg acccacgacc ccatccccgg caccccggac
      781 gacggcatta ccattctatc taaagtttcc gttgatacaa aaaaagcaat aatcgaagtc
      841 gacctgcgcg acaatcctga tcaattgtca tgtggtctca atgtgtccga ggcgtgcacc
      901 cggacctcgg ctatgattgg tatctttaac tcggtcgatc cttccgtgcc caaaaatgcc
      961 ggtgctttcc ggcgcgtaaa actacaactg aaagatggcg gcgtggtcgg tatcccccgc
     1021 cacccaatca gttgctcggc ctcgaccacc aatcttgccg accgcgtgca gaattccact
     1081 cagcgtgcgc ttgcagcgat tggagatccg ctcggcatgg gagaaattgg atgcttctgc
     1141 ccgccatcaa cctcggtagt atccggaacc gatccacgca acggcaagcc ctatgtaaat
     1201 cagttatttc tcggccacac ggctggtggt gcggtcgcgt atcaagatgc ctggctgacc
     1261 atgctgcatg ccggcaatgg cggtatgtgc tttatcgata gtgttgaatt ggatgaaatt
     1321 tacacgccta ttattgtgaa aacccggcgt ctcatcctgg atagcgaagg tgctggccgg
     1381 ttcagaggtg ctcccggcat cgaagtcgaa ttgggtcctg taaattgccg tatggaagcg
     1441 ggtttcgttg ccgacggtaa tattaataat cccaagggcg cccggggcgg tggtgatgct
     1501 gctcggtctg atcaattccg gcgccgcaaa aacggaaaaa tggaacgcct cgatcaatgc
     1561 tcccaagtgt ggatcgaaga cggtgaaatg atgctgtcaa ttgcctgtgg cggaggtggc
     1621 tacggaaatc cgaaagcacg cgacccggaa cgggtgctcc atgacgttga agaaggattg
     1681 gttagccgca aaagggcccg cgaaatctat agtgtttcga taactgccgc caacaaaatt
     1741 gatttaaaca aaaccaaaga actacgccgg cgcaaataat cggtcggctg aattgtaacg
     1801 aggaggaata tgttatgaga ttaaaggaca aaatcgcgat tgttaccgga tcgtccatgg
     1861 gtatcggcga agccattgct aaacgctatg cagccgaagg tgccacagtt gcggttaact
     1921 acttcaaaag cccagatgca gcggatggtg ttgttaaagc aatcgaagat gccggtggaa
     1981 atgccaaggc ttataaagcg gacgtttcca aaattcctga aattaaacgc ttttctggcg
     2041 aagtcattaa cgatttcggc cgagtcgaca ttctggttaa caatgcaggt gtatttcgca
     2101 cagtacccgt catggaaacc actgaggata tttgggacga gcagcttgac ctcaacctca
     2161 aaggctattt tttcttcgtc aaaacactgc ttccccattg gcgggaaact ggcggcggca
     2221 aggtcgtcag tatttcttcc attgccggca ccggcggatt tcccaattgc ccagcctatt
     2281 gcgcctccaa gggaggcgtt gtgaatatga cccgtgcatt ggcagcggag ctaggcaaag
     2341 agaatatcaa cgtgaattcc atcgctcccg gtaatgtggc tactcctttg aacgctcatg
     2401 tgcgcggacc cgacaacgaa gaatatgtcg aactaatgaa aatctttacg ccgacaggga
     2461 ttgctttcct cgatccggaa gatatgacag gtactgctgt gttcctggcc agcgatgatg
     2521 ccaaactcat tcacggtgaa accatcattg ttgacggtgg ttggtcggtc tggtgagttc
     2581 agatggtgtt cttgccggtc aaagcgcaat cgttacagcg ggcgcgtccg gcatcggccg
     2641 cgccatcgct gaatgcctga ttgcagcagg tgccgccgtt cacatatgtg atgtttccta
     2701 tgagcatttg aacaccgcca aaaccagcgt gtccggatta accggctcgc tcgctgatgt
     2761 cagcaaaccg gcggaagtcg agcagctttt tgatgatgcg ctcgcgcaaa tgggcgggct
     2821 agatattctg gtcaacaatg ccggcatcgg tggacctcgt gctgaagtcg ctgacattac
     2881 ttatgacgaa tgggatcaaa cgatagcggt taatttaaac ggcatgtttt actgcatcaa
     2941 gaacgctgcc tccaaaatgg ttgagcaaaa atcaggttgc atcattaaca tttcgacggc
     3001 atcggtacga accggattgc cgatgcgaac agcttacgta acagccaagc agggtgttat
     3061 gggactgact caaaatctgg cgagggaatt ggggccctca aatattcgct gcaatgccat
     3121 tcttcccggg ctgatcgaca atgaacgcgg acgttcaatt gttagcaact acgcccgaga
     3181 aaacaagacc tctaccgaaa aagccgaagc tgactttctc aaatatattt cgatgaaaag
     3241 ttggattaat ccatccgaaa tcggtgatac cgttgttttt cttgcatcaa acgcgggacg
     3301 tcacatcagc ggccaattca tcgccgttga tggcaacttc gagtgggaag cttaggccag
     3361 ggatatttcg gcgaaggcat gtgactggct cggaaaacgg gcggaaaatt cggatgatcg
     3421 tccttggatg ttgtttgttt cttttatcgc cccacatttc ccgttgattg tcccgcggga
     3481 gtattttgat ctttatcccc tagatcaaat tccgccaatc aagccagcga acgcggaact
     3541 ggcggatcac ccctggtggc gggcgttcaa taactgttac acctttgatc gttatttcaa
     3601 ggtcgatgag cagagacggg tggccatcgc ttcttacttg ggcttgtgca ctttcgttga
     3661 tgaactgata gacaacggta atttgtataa tttttttgtt tgaaggggaa gactgatccc
     3721 cggatcaagt ccggggtgac gggttggggc agtgaaaagt gaaacttatt actctgtgtt
     3781 ctcgctgtcc gctgtggtaa tttattgctg gaaacaaata cggaatactt aaatgacaaa
     3841 aaagacagca aaaaaagcgc ccaagaaatc acgctaccgc acggtaaaag cctataaaaa
     3901 cgaagagttt ctaaactcgt gtaacgcgcg gtcattgcgt attcaggcag agtatcttga
     3961 gcctgaaacc cggttcgaaa aatttaacgt taaagacacc attgtgtttt ttggctcagc
     4021 gcgtaccaaa tcccgcagtc aggcccaaaa agctttacgg caagctagga aatccagcgc
     4081 tccttcaaaa cagatcgtca gggctgagcg cgatttgaag atgtcgcgct attacgagga
     4141 agcaagggaa ctctcgaaac ggctaaccaa atggtcaaaa gatctaaaca atgaaggtga
     4201 tgaaaggcgg tttgtcattt gcaccggtgg tggacctggc attatggaag ccgcaaatcg
     4261 tggtgcttcg gaagctaagg gtttgaacat cgggctcaat atttcattgc cgtttgagca
     4321 acacgaaaac ccctatatta cccatcattt gggatttgaa tttcactact tttttatgcg
     4381 taaattctg
//
LOCUS       DASCNL010000589         3765 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001221677, whole genome shotgun sequence.
ACCESSION   DASCNL010000589 DASCNL010000000
VERSION     DASCNL010000589.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3765)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3765)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3765
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001221677"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1121)
                     /locus_tag="QF359_07860"
     CDS             complement(<1..1121)
                     /locus_tag="QF359_07860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HJO86860.1"
                     /translation="MSDKRQLDPTILREYDIRGIVGDGFNADEFRVIGRGFGSVVIEN
                     AGSEKIPTVAVGFDGRLSSPELANALSDGLTAAGVDVIKIERGPTPMLYFAMHEFAAD
                     GGMMITGSHNPPDYNGIKMVLDGHSFFGEEIQALGQRIAEGNFSEGSGRVEERSLSAR
                     YIERMLEDFVAGKDLSVAWDPGNGAAGEIVQELVKQLPGNHFLINAEIDGTFPNHHPD
                     PTVEKNLVQLKELVTKQGCDLGIGFDGDGDRIGIVDSGGRVLWGDQIMVVLARDVLRN
                     HPGTPIISEVKASKVFFDEVAKAGGEPIMWAAGHSLIKSKMAEMKAPLAGEMSGHIFF
                     ADKYYGYDDAIYSALRLLSILTQSDQSVADMRDSLPQML"
     gene            complement(1134..2453)
                     /locus_tag="QF359_07865"
     CDS             complement(1134..2453)
                     /locus_tag="QF359_07865"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HJO86861.1"
                     /translation="MRIAMVGTGYVGLVSGACFSEFGVDVVCVDKDANKIDKLNNGEI
                     PIYEPGLNSLIAKNTEAGRLSFTTDLPAAIKGVDAVFIAVGTPSRCGDGHADLTYVYD
                     AAREIASAMNGYTVVVTKSTVPVGTGDEIEKIMRETSPEGKFDVASNPEFLREGSAIN
                     DFMRPDRVVIGALDEKVQEIMRNLYRPLFLIETPILFTARRTAELIKYAANTFLATKI
                     TFINEIADLCEQVGADVQDVAKGIGLDGRIGSKFLHAGPGYGGSCFPKDTLALVKTAQ
                     DFDRPIKIVEAVVEVNENRKRHMADKIANACGGSVKGKKVAVLGLTFKPNTDDMRDSP
                     SLEIVPALIEGGAEVSAFDPQGMDEAREMLDGVNWCESSYEALEGADVVALVTEWNEF
                     RALDLERVKASMSNPVMVDLRNIYNPEEMVDAGFEYYCIGRTVENGK"
     gene            complement(2470..3339)
                     /gene="galU"
                     /locus_tag="QF359_07870"
     CDS             complement(2470..3339)
                     /gene="galU"
                     /locus_tag="QF359_07870"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HJO86862.1"
                     /translation="MVKPVRKAVFPVAGLGTRFLPATKAMPKEMLPVVDKPLIQYAVD
                     EAREAGIEEFIFVTGRAKSAIEDHFDHSYELECSLKDRGKDDVLKSIQDIIPGAGQVF
                     YTRQQKPLGLGHAVWCARYHIHDEPFAVLLADDLILAKPGCLKQMVETYQKTDGNLVA
                     VEDVPPDHTDRYGILDVVEDDGTIARAQGLVEKPKPAEAPSTLSIIGRYILQPEVFEQ
                     LDRQEKGAGGEIQLTDAMARTIDDVPFHGLRFSGNRYDCGSQLGFIEANLAFGIDRDE
                     IRDDLKIMLKKYT"
     gene            complement(3617..3757)
                     /locus_tag="QF359_07875"
     CDS             complement(3617..3757)
                     /locus_tag="QF359_07875"
                     /inference="COORDINATES: protein motif:HMM:NF012451.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86863.1"
                     /translation="MGLEPGASEDKIKEAHHRLLSKIHPDHGGSTFLATQINQAKDFL
                     LG"
BASE COUNT          963 a         1060 c          827 g          915 t
ORIGIN      
        1 ttgagcatct gcggtaaact atcacgcata tcagcgacgc tctgatcgga ttgcgttaaa
       61 atagacagca acctaagcgc cgaataaatc gcatcatcat agccataata tttgtcggca
      121 aagaatatat gcccgctcat ctcaccggcc agcggcgcct tcatttcagc cattttagac
      181 ttgataagcg agtgacccgc tgcccacatg atcggttcac caccagcctt ggcgacctca
      241 tcgaaaaaaa ctttactggc tttaacttcg gaaataatcg gtgtgccagg atgatttcta
      301 agtacgtcgc gggccagcac gaccatgatt tgatcccccc acagcacgcg cccgccggaa
      361 tcgacgatac caatgcggtc gccatctcca tcaaagccga tacccagatc gcacccctgc
      421 ttagtcacca gctctttcaa ttgcacaaga ttcttctcga ccgtcggatc gggatgatgg
      481 ttcggaaaag tgccatcgat ttcagcgttg atcagaaaat gattcccggg caattgcttg
      541 accagttcct gaacgatctc gccggcagcg ccattgccgg gatcccaggc aacgctgagg
      601 tctttgccgg cgacgaaatc ttccagcatc cgttcgatat accgcgctga aagtgagcgt
      661 tcttcaaccc tgcccgaacc ctcgctaaaa tttccctccg cgatgcgctg accaagcgcc
      721 tggatttctt caccaaagaa cgaatgccca tccagcacca tcttgatgcc gttatagtca
      781 ggcggattat gggagccggt aatcatcata ccgccatcag cggcgaattc atgcatcgca
      841 aaataaagca tcggcgtcgg cccacgttca attttaatga catctacacc agcggcggtc
      901 agtccatctg aaagggcatt agcaagttcg ggtgagctca accggccatc aaagccgacg
      961 gcaactgttg gtattttttc gctgccagca ttctcgataa cgactgagcc gaagccacgg
     1021 ccaatcaccc taaactcgtc agcattaaaa ccgtcaccga caataccgcg gatatcatat
     1081 tcgcgcagga tggtcggatc caactgccgc ttatcactca taagattaac gccctactta
     1141 ccgttttcga cggtgcgtcc aatgcaataa tactcaaaac cggcatcaac catttcttcc
     1201 ggattgtaga tattcctgag atcgaccatc accgggttgg acattgatgc tttcacgcgt
     1261 tctaaatcaa gggcacgaaa ttcattccac tcggtcacaa gggcgacgac gtcggcacct
     1321 tcaagtgcct cgtaagaact ctcacaccaa ttgaccccat caagcatctc gcgtgcctca
     1381 tccatacctt gcggatcaaa agcggaaacc tcggctccac cctcgatcaa agcgggtacg
     1441 atttccaggc tcggcgaatc ccgcatgtca tcggtattgg gcttaaacgt caggccaaga
     1501 actgcgacct ttttaccttt aacactgccg ccgcaggcgt tggcaatttt gtcagccatg
     1561 tgccgtttgc ggttctcgtt cacctcaacc acggcttcga caattttaat cgggcggtca
     1621 aaatcctgcg ccgttttgac caaggccagt gtgtcttttg ggaagcatga gccgccatag
     1681 ccggggccag catgcaggaa tttgctgcca attcgaccat caagcccgat gcctttggca
     1741 acatcctgaa catcggcacc aacttgctca caaagatcgg caatttcgtt gataaaagta
     1801 atcttggtcg ccaagaacgt gttggcagca tatttgatca gctctgccgt gcggcgcgcg
     1861 gtaaacagga ttggcgtttc gatcaggaat agcggccggt aaagattacg cattatttct
     1921 tggactttct catccagggc tccaatcacc acccggtcgg gccgcataaa atcgttgatt
     1981 gccgaacctt cccgcagaaa ttcgggattg gaggcgacgt caaacttacc ttcagggcta
     2041 gtctcgcgca tgattttctc gatctcatca ccggtgccga ccggcactgt cgatttagtc
     2101 accacaaccg tatagccatt cattgctgac gctatctcgc gcgcagcatc atatacataa
     2161 gtgagatcag cgtgtccgtc gccgcaacgg cttggggtgc cgacggcaat aaacaccgca
     2221 tccacaccct taatcgccgc cggtaaatca gtggtaaaag atagacgtcc ggcctcggta
     2281 tttttcgcta tcaaactatt gaggcccggt tcataaatcg ggatttcacc attattcagt
     2341 ttatcgattt tattcgcgtc tttatcgacg caaaccacat caactccaaa ttcggagaaa
     2401 caagcaccag atacgaggcc aacatagcct gttccgacca tcgcaatacg catctattaa
     2461 ttcctaaccc tatgtatatt ttttcagcat tattttgaga tcatcccgta tttcatcacg
     2521 gtcaatacca aatgccagat ttgcttcaat gaaccctaat tggctgccgc aatcatatcg
     2581 attaccgcta aaccgcagtc catgaaaggg cacatcatca atcgtccgcg ccattgcatc
     2641 ggtcaattga atttcaccgc cggcgccttt ttcttgacgg tcgagctgtt caaacacctc
     2701 cggctgcaaa atatagcggc cgataattga cagcgtcgag ggagcttcag cgggtttagg
     2761 tttttccacc agaccttgag cccgggcaat cgtgccatca tcttcaacga catcaagtat
     2821 gccatagcgg tcagtatgat ccggcggcac atcttcaacg gcaaccagat tgccgtcggt
     2881 tttttgatag gtttcaacca tttgttttag gcagcccggc ttggctaaga tcagatcgtc
     2941 ggccagcaac acggcaaaag gctcatcatg aatatggtag cgagcgcacc aaacagcatg
     3001 acccaagcct aaaggctttt gctggcgggt ataaaatact tgaccggcac caggaataat
     3061 atcctggatt gatttaagga catcatcctt accccggtct ttgagcgaac actcaagctc
     3121 atagctatga tcaaagtgat cttcaatcgc cgatttggcg cgtccggtga caaagataaa
     3181 ctcttcaata cccgcctcac gcgcctcgtc gacggcatat tggatcaatg gcttatcgac
     3241 caccggcagc atttctttcg gcatcgcttt ggtcgccggc aggaagcggg ttcctagacc
     3301 agcaacgggg aaaaccgctt ttcgaacagg tttaaccatc attgcctaca gtagtgcaaa
     3361 atttgcacaa gagattcgcg tcttattgcc acaggcgacc tcaagccgca agccgaacat
     3421 ccacacaatc gtttgattta ttgttaagaa tcagcatcga ttatggcgat tcttttcaaa
     3481 aatcacatcc accattcaat aatttagcgc tgcgctcttg atacattagg cgtcgcatgc
     3541 cggattggca ctgccagaca tgaaaccggc ggcaataaca ccgcctgcga tcataagtga
     3601 aataatcagc atggtatcaa cccagcaaaa agtccttcgc ttgatttatc tgcgtcgcca
     3661 aaaaagtcga gcctccatga tcgggatgaa ttttacttag caatcgatga tgggcttctt
     3721 tgatcttatc ttcactggca ccgggctcaa gacccaatat ttcat
//
LOCUS       DASCNL010000590         1320 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001221744, whole genome shotgun sequence.
ACCESSION   DASCNL010000590 DASCNL010000000
VERSION     DASCNL010000590.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001221744"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="QF359_07880"
     CDS             complement(<1..596)
                     /locus_tag="QF359_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbdK family carboxylate-amine ligase"
                     /protein_id="HJO86864.1"
                     /translation="MPFGEPTLTIGVEEEYLIVDPVSRALAEPPDEAFTKCSERLKNL
                     VKPEFMKSQIEVATSVCGTVKEARQQLVELRSTIAEVMGDYDLAPIAASTHPFATWET
                     QFHTNKARYNFLAENMQAVARRLLISGMHVHVGVEDDEMRIEMMSQVAYFLPHLLALS
                     TSSPFWRGENTGLKSYRLCVFDELPRSGLPERFESYGE"
     gene            complement(597..>1320)
                     /locus_tag="QF359_07885"
     CDS             complement(597..>1320)
                     /locus_tag="QF359_07885"
                     /inference="COORDINATES: protein motif:HMM:NF016873.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HJO86865.1"
                     /translation="LPVLLICDHASKTVPQEMANLGLDEATMDLHVGWDIGAAEVVRQ
                     LANDLNCMAVLAGYSRLVIDNNRQPGDPTGIPAVSDDIVIPGNQDLTEAEQIARTDQF
                     FWPYHHAITDGIAHLWRNGLPPALFSVHTFTPSMNGEDRLWHIGVLWNRDPRMAEPVI
                     RKLRDHGEGFHIGDNQPYSGKDIAFSLDMHAGSAGLPHCAVEIRQDLVATPSGAEFWA
                     EILAEVLHDVLSIDELHKVEHF"
BASE COUNT          332 a          371 c          325 g          292 t
ORIGIN      
        1 tattcaccgt aagattcaaa gcgttctggc agaccggagc gcggcaattc atcaaacaca
       61 cagagacgat aggatttaag cccggtattt tcgccccgcc aaaagggtga tgacgttgaa
      121 agcgctaaga gatgtggcag aaaataggca acctgactca tcatttcgat ccgcatttca
      181 tcatcttcga caccgacatg aacatgcatg ccgctgatca gcagccgtcg tgccactgcc
      241 tgcatgttct cagccaggaa attataacgt gctttattgg tatgaaactg ggtttcccag
      301 gtggcaaagg gatgggtcga ggcggcaatc ggagccagat catagtcgcc catcacctcg
      361 gcaatggtcg agcgcaactc aaccaattgc tggcgggctt ccttaacagt accacaaacg
      421 ctggtcgcga cttcaatctg tgatttcata aactccggtt tcaccagatt cttaagacgt
      481 tcgctgcatt tggtaaacgc ttcatctggc ggctcggcaa gggcgcggga taccggatca
      541 acaatcagat attcttcttc aaccccaatg gtcaatgtcg gttcgccaaa cggcatttaa
      601 aagtgctcca ccttgtgcaa ttcatcgata ctcaggacat cgtgcaaaac ttcggccagt
      661 atctcagccc aaaattcagc gccactcggt gtggccacca aatcctggcg gatttcaaca
      721 gcgcaatgag gcagaccggc gctgcctgca tgcatatcca gcgaaaacgc aatatccttg
      781 ccggaatatg gctgattatc gccaatgtgg aaaccctcac catggtcccg cagctttcga
      841 atgacgggct cggccatgcg tggatcgcgg ttccataaaa cgccgatatg ccagagccga
      901 tcctcaccat tcattgaggg tgtaaatgta tgcaccgaaa agagtgctgg cggcagaccg
      961 tttcgccaca gatgcgcaat cccatcggtg atcgcatgat gatagggcca aaaaaactga
     1021 tccgtccggg caatctgttc ggcttcggtc aaatcctgat tgccgggaat aacgatatca
     1081 tcactcacgg caggaatgcc tgtcggatca cccggctgac ggttgttatc gatcaccagg
     1141 cgtgaatatc cggccagcac cgccatgcag ttcaggtcat tcgccaactg ccggaccacc
     1201 tcggctgcgc caatatccca gccgacatgc aaatccatgg tcgcttcatc aaggccgagg
     1261 ttagccatct cctgcggcac tgtcttgctg gcatggtcgc agatcagcaa caccggtaat
//
LOCUS       DASCNL010000591         1299 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001224228, whole genome shotgun sequence.
ACCESSION   DASCNL010000591 DASCNL010000000
VERSION     DASCNL010000591.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1299)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1299)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001224228"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="QF359_07890"
     CDS             <1..285
                     /locus_tag="QF359_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HJO86866.1"
                     /translation="IKAANHQNLALEYDLYHMQIMEGNLVNRMSGILDHIGHIQFADT
                     PGRHEPGTGEINYPFVFKALDKMGWPGWLGAEYVPTSSTEESLGWLEPYI"
     gene            366..>1299
                     /locus_tag="QF359_07895"
     CDS             366..>1299
                     /locus_tag="QF359_07895"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HJO86867.1"
                     /translation="MSDTDQQLIDNCLTDAEFPELPDFYRGKVRDAYGLPDGRRLLIS
                     TDRQSAFDQVLAAVPFKGQVLTQTARYWFDKTADICSNHVISYPDPNVALVKNLDMLP
                     IEMVVRDYLTGSTETSIWPMYERGERLLYGHEFPDGLMKNQKLPETIITPTTKAAQGD
                     HDAPITEAEILETQLVTTEQWHELAEKSLALFTRGREMAVKNDLILVDTKYEFGVDEN
                     GIIVVADEIHTPDSSRYWLADSYPARFASGENPESLDKEFLRLWIAAKCDPYKDPIPE
                     IPAATLIEFSEKYIKLFERVTGQAFEKPDLSISVR"
BASE COUNT          346 a          288 c          338 g          327 t
ORIGIN      
        1 atcaaggcgg ccaaccatca gaatctcgcg cttgaatatg acctctatca catgcagatc
       61 atggaaggga atttggtcaa tcgtatgtcg ggtattctcg atcacatcgg tcatattcaa
      121 tttgccgata cgcccgggcg gcatgagcca ggaaccggcg agattaacta tccatttgtg
      181 tttaaggcgc tcgacaaaat gggctggcca ggctggctcg gcgccgaata tgtcccgaca
      241 agttcgacgg aagaatcttt aggctggctt gagccttata tctagccata ttttttggtt
      301 ttcagaacgc ttcgaatcga gtagtcacct tatatctcta ataacgataa taagggcata
      361 aaaacgtgag tgataccgac caacaactga ttgataattg cctaaccgat gcggaatttc
      421 cagagctgcc ggatttttat cgcggcaaag tgcgggatgc ctatggcttg cctgatggca
      481 ggcggttgtt gatttcgacc gaccggcagt cagcgtttga tcaggtgctg gcagcggttc
      541 cctttaaagg gcaagtgttg actcagacgg cgcgctattg gtttgataaa acagcagaca
      601 tttgttccaa tcacgtgatc agctatcccg atcccaatgt tgcactggta aaaaatctcg
      661 atatgctgcc gattgaaatg gtggtgcggg attatttaac cggctcgacg gaaaccagca
      721 tttggccgat gtacgagcgc ggtgagcggc tactctatgg ccatgaattt ccggatggct
      781 tgatgaaaaa tcagaaactg ccggaaacga ttatcacacc gacgaccaag gcagctcaag
      841 gcgatcatga tgcgccgatt acggaagctg aaattcttga aactcaattg gtgacaactg
      901 agcagtggca cgaattagct gagaaaagct tggccttatt tacgcggggc agggagatgg
      961 cggtgaagaa tgaccttatt ctggttgata cgaaatatga gttcggcgtt gacgaaaacg
     1021 gtataatagt tgttgctgat gaaatccata cgccggattc tagccgttat tggcttgcgg
     1081 atagttatcc agcccgtttc gcatccggcg aaaacccgga aagtttggat aaggaatttc
     1141 tgcgcctatg gatcgctgct aaatgcgatc cttacaaaga tccaatcccc gaaattccgg
     1201 ccgcaacact tatcgaattt agcgaaaagt acataaaatt atttgaacgg gtcacggggc
     1261 aggcatttga aaagccggat ttatccatct cggtccggg
//
LOCUS       DASCNL010000592         1821 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001225015, whole genome shotgun sequence.
ACCESSION   DASCNL010000592 DASCNL010000000
VERSION     DASCNL010000592.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001225015"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1353
                     /locus_tag="QF359_07900"
     CDS             <1..1353
                     /locus_tag="QF359_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86868.1"
                     /translation="AGTIGLNRFGDDPVSYVKKADTAPPEIDAEPAPVVKPETVVLPN
                     EIETHEPSEQQTGMDRTTSSLVLENWLNGEDLENLPVTEIVVEKTGSKSSPAPTLDPE
                     TVLVHQVAPAQPKKHAEVEDQKSIYETERFLEDLRKRATTDPAHAAYLAEGAEAGNSW
                     AKLEIAATWLSDAASSREKTDLGLVYLRDVADTHESYLGAETEAAYFLGEIYRIGMRF
                     SRPNEDLSSKYYVRAASLGHVGAQRSLARQIADALDQNADQEKSFNLIQTIIANALSD
                     RESTSALLHLIEFDWRLTHLAGMQNILKSLVDQGNGIAAKYLGRKALDDNDLEMALKI
                     LNCADELDRHIIDKIMNVIHAGHGQDSTLNALVDLLQKHAVDGNAYAQHQISFAYNQG
                     IGRPQDDLLAYVYINMACAKIHGRERDEVVRQRENLKELLSIEEISAAHKMTRELFNN
                     "
     gene            complement(1369..>1821)
                     /locus_tag="QF359_07905"
     CDS             complement(1369..>1821)
                     /locus_tag="QF359_07905"
                     /inference="COORDINATES: protein motif:HMM:NF026183.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HJO86869.1"
                     /translation="EAFTATNFYVGDVGAGSKMKYLANYLVFVHTVAAAECFVLGQKA
                     GFDPKLIHEVIKKSAGNSRMFEQRGEMMAKSDYRDGTAAVFNIFHKDAAIITDYAAEI
                     KSPIDLFVIAQQKFNSAAALGLDHLELAAVCKAIEMAASIDRDMVEDS"
BASE COUNT          505 a          461 c          428 g          427 t
ORIGIN      
        1 gccggaacca tagggctcaa ccgtttcggc gatgatcctg tttcctatgt aaagaaagct
       61 gacactgctc caccggaaat cgatgcagag cccgctcctg tggttaaacc tgaaactgtg
      121 gttttgccta atgaaattga aacccacgag ccttcggaac agcaaacagg catggataga
      181 acaacttcgt cgttagtcct tgaaaactgg ctgaatggcg aagatctaga aaatcttccg
      241 gtcacagaaa ttgttgttga aaaaaccggg tcaaaatctt caccagcgcc aacgcttgat
      301 cctgaaaccg tcctggtgca ccaggttgct cctgctcaac ccaaaaaaca tgctgaagtt
      361 gaggatcaaa aatcaattta tgaaaccgaa cgatttctcg aggacctccg caagcgggcg
      421 accaccgatc cggcacatgc cgcctattta gctgaaggtg cagaggctgg aaattcctgg
      481 gctaagctgg agatcgccgc cacctggttg agtgacgctg ccagctcccg cgaaaaaact
      541 gacctgggac tggtctattt acgagatgtt gctgataccc atgagagtta cctcggcgct
      601 gaaaccgagg cagcctattt tctcggtgag atttatagaa ttggcatgcg cttttcccgc
      661 cccaatgagg acttgagctc taaatattat gtccgggcag cttcgctggg tcatgtcggt
      721 gcacagcgca gtctggccag acaaatagcc gacgcacttg atcaaaatgc cgaccaagaa
      781 aaatccttta atctaatcca gacaattatt gccaacgcct taagtgatcg tgagagcacc
      841 tccgccctct tgcatctaat cgaatttgat tggcgtctta cccacctcgc aggtatgcaa
      901 aatattttga aatccctggt cgatcagggg aatggaattg ctgccaaata tctcgggcga
      961 aaggccctgg atgataatga tctggaaatg gcgcttaaaa ttctaaattg tgccgatgaa
     1021 ttggatcgcc atataatcga taaaatcatg aacgtcatcc atgctgggca cggtcaggac
     1081 agcacgctaa acgccctcgt cgatctgctg caaaaacatg ctgtcgacgg caatgcttac
     1141 gcccaacacc agatctcttt tgcctacaac caaggtattg gcaggccgca agatgacttg
     1201 ctggcttatg tttacatcaa tatggcttgc gccaaaattc acggccgcga gcgagacgag
     1261 gtggtgagac agcgcgaaaa cttaaaagaa ttattgtcga tcgaggaaat tagcgccgcc
     1321 cataaaatga cccgcgagct gtttaataat taacgccaca gctataaatc agctgtcttc
     1381 gaccatatca cggtcaatgc tggcggccat ttcaattgct ttgcagacgg cagccagttc
     1441 gagatgatcc aacccaagtg ctgcggcaga gttgaacttt tgctgggcaa taacaaatag
     1501 atcaattggc gacttaatct cggcggcata gtccgtaatg atcgcagcat ctttatgaaa
     1561 aatattaaac actgccgccg tgccgtcgcg gtaatcggac ttggccatca tttcgccgcg
     1621 ttgctcgaac atgcgtgagt taccggcact ctttttgata acttcatgga tcaatttggg
     1681 atcaaaaccg gctttctggc cgagcacaaa acattcagcc gcggcgaccg tatggacaaa
     1741 aaccagataa ttggcgagat atttcatctt cgaaccggca ccgacgtcac caacataaaa
     1801 attggtcgcc gtaaaagcct c
//
LOCUS       DASCNL010000593         6878 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001226092, whole genome shotgun sequence.
ACCESSION   DASCNL010000593 DASCNL010000000
VERSION     DASCNL010000593.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6878)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6878)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6878
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001226092"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="QF359_07910"
     CDS             complement(<1..438)
                     /locus_tag="QF359_07910"
                     /inference="COORDINATES: protein motif:HMM:NF013866.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJO86870.1"
                     /translation="MSEQMIKVSAEDGHTFDAFRATPDGDVKGGLVVLQEIFGMTDQL
                     KSVTRSWAADGYDTILPAMYDRIKPNSVIAFDDMENAQGMMKQFDPDGVAADIRAAVA
                     TVDGGKGVSVIGFCWGGGAAMRMASILDLTGAISYYGTMLANNA"
     gene            complement(513..2144)
                     /locus_tag="QF359_07915"
     CDS             complement(513..2144)
                     /locus_tag="QF359_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-(methylthio)propionyl-CoA ligase"
                     /protein_id="HJO86871.1"
                     /translation="MLGKMMDMPLTITSLIQHAARFYGDTEIVSRSIEGPIHRYTYSD
                     AYQRIQKLAKAFIELGVEPGDRIATLAWNGYRHLELYVAVSGIGAVCHTINPRLFGDQ
                     IAYIINHAKDKIIFIDLSFVPVLEGIKDKIDSSAKIVVMTDQAHLPDCQLDGILCYED
                     LLEGQSDHYDWPELDEDTASSLCYSSGTTGNPKGVLFSHRSTVLHAWGACAKDSLGIS
                     AQDAILPVVPMFHVNAWGIPYACAMAGSKLVFPGAGMDGASVYEMLDTEEVTFTAGVP
                     TVWLLLLQYLQESANKLPHLERMVVGGAALPPSIIDAFENEYDCECVHAWGMTEMSPI
                     GTIGYLKRNMKDLSAEEIMSYKVKQGRPVYGVEMKIVDDDDNELPQNGKDFGELLVRG
                     PWITNDYFEDDEATVVSFDKDGWFRTGDVCTIDERGFMQIVDRSKDVIKSGGEWISSI
                     ELENIAVGHADIAEAAVIGIAHPKWDERPLLICVKAEGAEVTAESVLDIFDGKVADWW
                     IPNEVAFVDELPHTATGKLLKTELRKQFSDHTFAD"
     gene            complement(2279..2740)
                     /locus_tag="QF359_07920"
     CDS             complement(2279..2740)
                     /locus_tag="QF359_07920"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJO86872.1"
                     /translation="MPIVVTSAAQPGPDDHVLTLCHMLANRIGKAFATELESQDMTVA
                     EWRVLLTLAQHQNASGQEITGRWAMDKMAVNRAIKNLERGGHIKKKRSKADRRTINLQ
                     LTARGRKIYDDLLPMANDRYHALLSGLDKKEEQQLRQALLKMIAHTDSLID"
     gene            2835..5003
                     /locus_tag="QF359_07925"
     CDS             2835..5003
                     /locus_tag="QF359_07925"
                     /inference="COORDINATES: protein motif:HMM:NF024877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HJO86873.1"
                     /translation="MLNNKRRTRPVELGPYPLERLHRDPAVLKAEAAHSSVSPSPMPT
                     DSHHYLIQSTNVHLDAFEKLREPEPFHKKAPVPDDLTRRSQDIKGAGYFLDASMIGIC
                     EMPQNAWLNNANSTYTHAVAVLVEYGNPIDADNKAADWVAGNEHLLATLRAAEIALDN
                     SGQISSMGFESRVHWTGATDIDLDKVTVLAGLAIREGDQLINPYVDQRFAVAVITTDY
                     ALATDLPLHASARNGRDLNYQLGLTGAVSGLERWRVRKRPSHLGPYPVETLKRIDRLT
                     TEVFDDEVPRVPSRANMYMRSAMGDLSDKSKRQANRWSQKHPVSQGIMRPSWAIKPLQ
                     EGQTAPGTAPDSVNAGDNSKALKALSHYMGSVITGICEIPDYCWYSHDKRGQPIEPYH
                     KYGLVVLIDQGYETFLGASGNDWISGSQSMRAYLRGGEIVGVMAEMIRRMGYGARAHS
                     NLDSHVLHVPMVLAAGLGEQSRVGESAINPFLGMRFKTAVLTTDMPLTADKPIDFGVQ
                     RFCSKCVKCARECPCGAIPYGDKVIFNGYETWKPDSERCTMYRSTNMKGSACGRCVKV
                     CPLSKDTTWDGPLLHQVGSWLGVNAMWLKPVLAPLAIWMDDKLGQGNPVDEKKWWLDL
                     EVMGDKSFRYDPNNYTIAAEGVNRPMIDPAKKPKSADNIALFPASTLPPPDLVGPGST
                     DRKLGLKLATEAETVEQALARRAAGGEMPATYRPSYLDEG"
     gene            complement(5010..5891)
                     /gene="mmsB"
                     /locus_tag="QF359_07930"
     CDS             complement(5010..5891)
                     /gene="mmsB"
                     /locus_tag="QF359_07930"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008442 - 3-hydroxyisobutyrate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HJO86874.1"
                     /translation="MSNIAFIGVGNMGGPMALNLVKAGHNVLAFDIVPSSLDAVVKGG
                     CEKATSAVAAIDGAEVIISMLPAGEHVDAVYNTDVLPNISAHTVLIDCSTIDMATSQA
                     VHEKAATKDCLMVDAPVSGGVKKAVDGSLTIMVGGTADAFAAAEPYLQVMGANIFNCG
                     DAGAGQAVKMCNNMMLGIQMTSTAEAFVLAEKLGIDAEKMFNVINVSSGQCWSLSSYC
                     PVPGLVPSAPVNNDFDGGFGTALMIKDMNLALAAAKAAGSSVDVAEKAAAIYQDYCDE
                     GSGAKDFSGIIELIRGR"
     gene            complement(5917..>6878)
                     /locus_tag="QF359_07935"
     CDS             complement(5917..>6878)
                     /locus_tag="QF359_07935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86875.1"
                     /translation="YDHVRDLVNGNIQPEGIDLNCLIFDVEETFFRFAQSYEWEVSEL
                     SFAKFCSLRSQDDPPVVGIPVFISRMFRHSAFYIRSDGKIKTSADLKSGRIGVPEWTQ
                     TATVYARGWLHHEGGAKLDEVDWVQGGVNEPGRLEMGKTNVPEGVRITRESDRSLTDM
                     LIEGELDALISARAPNAFLSPDGKIVRLIPNYPKVELDYFKRTGVYPIMHIIAIRRDV
                     YERDRWIAMNLMTAFEQAKAKMVERLSDITASRIPFPWMPDQFQQMKQEFFPDHDYWP
                     YGIEGSRVTLETFLAYCDEQGVTKRKMTPEELFVPETQKVFKV"
BASE COUNT         1678 a         1932 c         1656 g         1612 t
ORIGIN      
        1 cgcattgttc gccagcatcg taccataata tgaaatagcg ccggttagat cgagaatact
       61 cgccatccgc atggctgcac caccacccca gcaaaatccg atgacggaaa cgccttttcc
      121 gccatcaacc gttgccacgg cagcacgaat gtccgctgcc acaccatcgg gatcaaattg
      181 tttcatcatc ccttgggcat tttccatatc gtcaaaagcg ataacgctat tcggttttat
      241 ccggtcatac atcgccggca ggatcgtatc atagccgtcc gccgcccagg accgcgtcac
      301 cgatttcaac tgatcggtca tgccaaaaat ttcctgcaga acgaccaaac cgccttttac
      361 atcgccatct ggcgtcgcgc gaaaggcatc aaaggtgtga ccgtcttccg ccgatacttt
      421 aatcatttgc tctgacattt aataatcttc ccgaatttga tttagcttaa tttatttgtt
      481 tcgatcatca ccaataatgc cttaaatgca acttaatcag caaaagtgtg atcgctgaat
      541 tgtttcctaa gctcagtctt caagagtttt cccgtagctg tgtggggtag ctcgtcgaca
      601 aaagcgactt cattgggtat ccaccaatca gccaccttgc cgtcgaagat atccagcacg
      661 ctctcagccg taacctcagc accttcagct ttgacgcaga tcaacaacgg ccgctcatcc
      721 cattttggat gggcgatacc gataacagcg gcctcggcaa tatcggcgtg accgaccgca
      781 atgttttcga gctcgattga actgatccat tcaccaccgg atttgatgac atccttagag
      841 cggtcaacaa tttgcatgaa accgcgctca tcaatggtgc agacatcccc ggtgcggaac
      901 cagccatctt tatcgaaact gaccaccgtg gcttcgtcgt cttcaaaata gtcattggta
      961 atccagggtc cccgcaccag aagttcgcca aaatccttgc cgttttgcgg cagttcatta
     1021 tcgtcatcat cgacaatttt catttcgacg ccataaaccg ggcgaccttg tttgaccttg
     1081 taagacatta tttcttcagc gcttaaatct ttcatgttgc gcttgagata accgatagtg
     1141 ccaattgggc tcatctcggt cataccccag gcgtggacac attcacaatc gtattcgttc
     1201 tcaaaggcat cgataattga cggcggcaag gccgcaccac cgaccaccat gcgctccaga
     1261 tgaggcaatt tgttggcgct ttcctgcaga tattgcagca acaacagcca cactgtcggc
     1321 acgccggcgg taaacgtaac ttcttcggta tcaagcattt cataaaccga agcaccatcc
     1381 ataccggcgc cggggaagac caatttagaa ccagccatcg cgcaggcgta ggggatgccc
     1441 caggcattta cgtggaacat cggcaccacc ggcaaaatag cgtcctgggc tgaaatgccg
     1501 agactatctt tggcgcaagc cccccacgca tgcagcacgg tggagcgatg gctaaacagc
     1561 acccctttcg gattaccggt cgtgccggag ctatagcaca gtgacgatgc cgtatcttca
     1621 tccaattcag gccagtcata gtggtcagac tggccctcga gtaaatcctc gtagcataaa
     1681 ataccatcta attggcaatc cggcagatga gcctgatccg tcatcacaac gattttcgcc
     1741 gagctgtcga tcttatcctt gatgccttcc aagaccggca caaagctgag atcgataaaa
     1801 ataattttat ctttcgcatg attaataatg taggcaatct gatcaccaaa gagacgggga
     1861 ttaattgtgt gacaaaccgc gccaatcccg gagacagcaa cataaagttc taaatgccga
     1921 tagccattcc aagccagggt ggctatccgg tcacccggct caacgcccaa ttcaataaag
     1981 gctttcgcta gtttttggat gcgctgatag gcatcactat aggtatagcg gtgaatggga
     2041 ccctcaatac tgcgtgagac tatttccgta tcgccgtaaa atcttgccgc gtgctggatc
     2101 agcgaggtga tcgttaacgg catatccatc attttaccaa gcatggtttc actcccttac
     2161 tttattattc accgtgaaag tggtgtcctc ttgggtgttc cttatggtgg ggagcatttt
     2221 catagtgctg gcgaataagg tcaacgccaa aatcattgcc gttcggcgtt caggccgatt
     2281 agtcaataag tgaatctgta tgagcaatca ttttgagcaa ggcctgacgc agttgttgct
     2341 cttccttttt atcgaggccc gacagaagcg catggtagcg gtcattggcc attggcaaca
     2401 gatcatcata gattttccgg cctcgcgccg tgagctgcaa attaatcgtg cggcgatcag
     2461 ccttgctgcg ttttttcttg atatgcccgc ctcgttcgag attcttaatc gcccggttga
     2521 cggccatttt gtccatcgcc cagcggccgg tgatctcctg acctgaagca ttttggtgct
     2581 gtgccaacgt caacaacacc cgccattcag cgactgtcat atcttggctt tctaactcgg
     2641 tcgcaaaggc cttgccaatc cggttggcca gcatgtgaca gagcgtcagg acatggtcgt
     2701 ccggtccagg ctgagccgct gaggtgacta caattggcat caagattttt cctctggcat
     2761 aaattaatat catatgatat cattttctga aagctcgggc aatacgagtg atcgaccaga
     2821 ggagagaaaa gctaatgttg aataacaaac gccgcacccg gccggttgag ttgggtccat
     2881 acccactgga aaggttgcac cgggatcccg ctgtcctgaa ggctgaggcg gcgcactcat
     2941 ctgtgtcgcc atcacccatg ccaaccgact cacaccacta tctcatccaa agtacaaatg
     3001 ttcatttaga tgcctttgaa aaactgcggg agcccgaacc tttccataaa aaagcgccgg
     3061 tgccggatga tctcacccgc cgcagccagg atatcaaagg agccggctat ttccttgacg
     3121 cctcaatgat cggtatctgc gagatgccgc aaaatgcgtg gctcaacaac gcaaactcca
     3181 cctataccca cgccgtcgct gttttggttg aatacggcaa tcctattgat gccgataata
     3241 aggcggctga ttgggtggcc ggcaatgaac atcttttggc cacgctccgc gccgctgaaa
     3301 tcgctctcga caatagtggt cagatttcct caatgggatt tgaaagccgg gttcactgga
     3361 ccggggcaac cgacatcgat ctggataagg ttaccgtttt agccggcctt gcgattaggg
     3421 agggcgacca actgatcaat ccttatgttg atcagcgttt tgccgttgcc gtgatcacca
     3481 ccgattacgc tctcgctacg gatttgccat tgcatgcatc ggcccgtaat ggccgcgacc
     3541 tcaactatca gctcggcctt accggcgcgg tatctggtct cgagcgctgg cgtgttcgca
     3601 agcggccatc ccatctcggc ccctacccgg tcgaaacgct aaagcgcatt gaccggctga
     3661 ccaccgaagt tttcgatgat gaagtacccc gggtaccgag ccgcgccaat atgtatatgc
     3721 gcagcgccat gggtgatctc agcgataaga gcaagcgcca agcgaaccgc tggtcgcaaa
     3781 aacatcctgt gtcgcaaggc atcatgcgcc caagctgggc tatcaaaccc ctacaagaag
     3841 gtcagaccgc acctggtacg gcgccggata gtgtgaacgc cggcgacaac agcaaagccc
     3901 tcaaagcgct tagccattat atgggctcgg tgatcaccgg tatttgtgaa attcccgact
     3961 attgctggta ttcccacgac aagcgcggcc agccgattga accctatcac aaatacggcc
     4021 tggtggtgct gattgatcag ggttatgaga cctttttagg cgccagcggt aatgattgga
     4081 tttccggttc ccaatcgatg cgggcttatt tacggggcgg agaaattgtc ggtgtgatgg
     4141 cggaaatgat tcggcggatg ggatatggag ccagggcgca cagcaatctc gacagtcatg
     4201 tcctgcatgt gccgatggtt ttggcagccg gcctcggtga acaaagccgg gtcggcgaaa
     4261 gcgcgattaa tccgtttttg ggcatgcgct ttaaaaccgc cgtgctgacc acagatatgc
     4321 cgctgacagc cgataaaccg atcgatttcg gcgtccagag gttctgctca aaatgtgtta
     4381 aatgcgcccg cgaatgcccg tgcggcgcga ttccctatgg cgacaaagtg atctttaacg
     4441 gctatgagac ctggaagccc gatagcgagc gctgtaccat gtaccgctcg accaatatga
     4501 aaggctcggc ctgcgggcgt tgcgtcaaag tctgcccgct cagcaaggat accacctggg
     4561 atggcccgct acttcatcaa gtgggcagct ggctcggtgt caacgcgatg tggctaaaac
     4621 ccgtcctcgc cccgctggcg atctggatgg acgataagct cggccagggc aatccggttg
     4681 atgagaagaa atggtggctc gatctcgagg tgatgggcga caagtctttc cgctatgatc
     4741 ctaacaatta caccatcgcc gccgaaggcg tgaaccgacc gatgattgat cccgcaaaaa
     4801 aacccaagag tgccgataac attgccctct tcccagcctc gaccctgccg ccgccggatt
     4861 tggtcggccc cggctcaacc gaccgcaagc tcggacttaa attggccacc gaagccgaaa
     4921 cggtcgaaca ggctttagcg cggcgggccg ccggtggcga aatgccggcg acctaccggc
     4981 cgagttattt ggatgaagga tgagactact caacgcccgc ggataagctc gatgatgccg
     5041 gagaaatcct tagcccccga cccttcatcg caatagtctt gatagatcgc cgcggctttt
     5101 tcagcgacat caacggaact gccagctgct ttggctgctg ccaaggctaa attcatatcc
     5161 ttgatcatca aagctgtgcc aaagccacca tcaaaatcat tgttgaccgg cgcactcggc
     5221 accaaaccgg gcaccgggca ataactgctc aatgaccagc attgcccgga agatacattt
     5281 atgacgttga acattttttc agcatcaata cccagcttct ctgccagcac aaaagcttcg
     5341 gcggttgagg tcatttggat gccaagcatc atgttattgc acatcttgac cgcctgcccg
     5401 gcgccggcat cgccgcaatt gaatatgttt gcgcccatca cttgaagata aggctccgcc
     5461 gccgcgaagg cgtcagcagt gccaccaacc ataatcgtca aagacccatc cactgctttc
     5521 ttaaccccgc cagacaccgg cgcatcgacc atgagacagt ctttggtggc agccttttcg
     5581 tgaaccgctt gtgatgttgc catatcgata gttgaacaat cgattagcac tgtatgggcc
     5641 gagatattcg gtaacacatc agtattataa accgcatcga catgttctcc ggccggcagc
     5701 atagagatga ttacttcggc gccgtcaatc gctgccacag ccgaggtcgc tttttcacaa
     5761 ccacctttaa ctaccgcatc cagactggat gggacgatat caaaggcaag cacattatgc
     5821 ccggctttga ctaaatttag agccatcggg ccgcccatat tacccacccc gataaaggct
     5881 atgttgctca tgccaatctc caataaaatt ccaacgctaa accttgaaca ccttctgcgt
     5941 ctccggcaca aacaattctt ccggcgtcat ttttcttttg gtaacgccct gctcatcaca
     6001 ataggccaaa aaggtttcca gtgttacgcg gctaccttcg atgccatagg gccagtaatc
     6061 gtgatccgga aaaaattcct gcttcatctg ctggaattga tccggcatcc agggaaatgg
     6121 aatacgggac gcggtgatat ctgacaatcg ctcaaccatt ttggctttcg cctgttcaaa
     6181 tgctgtcatt aaattcatcg caatccagcg atcccgctca tagacgtcgc gtctgatcgc
     6241 gattatatgc atgatcggat aaacgcctgt gcgcttgaaa tagtcgagct caaccttcgg
     6301 gtaattcggt attaaccgga caatcttacc gtcaggcgac aggaaagcgt tgggtgcccg
     6361 cgctgagatc agggcatcca actcaccctc gatgagcatg tccgtcagtg agcgatcact
     6421 ctcgcgggta atccgcacgc cttccggaac attggtctta cccatttcaa gtcgtcccgg
     6481 ttcattgacg ccgccctgca cccagtcgac ttcgtccaat tttgcgccgc cttcatgatg
     6541 cagccagccg cgggcataaa ccgtcgcggt ctgggtccat tccggcacgc caatgcgacc
     6601 actctttaga tccgccgaag ttttaatctt accgtcgctc ctaatataaa acgccgaatg
     6661 acggaacatg cgggagataa acaccggaat accgacaact ggcggatcat cctgagatct
     6721 cagcgagcag aacttggcaa atgaaagttc agaaacctcc cattcatagg attgagcgaa
     6781 gcgaaaaaag gtttcctcaa cgtcgaagat caagcaattg agatcaatgc cttccggctg
     6841 gatattacca ttcaccagat cacgcacatg atcgtaat
//
LOCUS       DASCNL010000594         2822 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001226431, whole genome shotgun sequence.
ACCESSION   DASCNL010000594 DASCNL010000000
VERSION     DASCNL010000594.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001226431"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="QF359_07940"
     CDS             <1..224
                     /locus_tag="QF359_07940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86876.1"
                     /translation="RRFGALGRSPPALTDASDDEPRDGQRIGPRGAIAGHLARAVKRI
                     LYEQLVDPPHQRQVLRALAFRGVISTASD"
     gene            complement(447..584)
                     /locus_tag="QF359_07945"
     CDS             complement(447..584)
                     /locus_tag="QF359_07945"
                     /inference="COORDINATES: protein motif:HMM:NF013677.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HJO86877.1"
                     /translation="MTKRRRFTAAFKAQVALDALLGDKTIQEIAVHCKVHPNQVSTWK
                     R"
     gene            871..2169
                     /locus_tag="QF359_07950"
     CDS             871..2169
                     /locus_tag="QF359_07950"
                     /inference="COORDINATES: protein motif:HMM:NF019607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HJO86878.1"
                     /translation="MRTIQKLAASVAVSLAFISSPAAALDVKVEAFATGLGAPIDLKE
                     APDGTGRIFIMEQTGAIVVVNADGTMRPKPFLDLRAKIVKQYVRFDERGTLGFAFHPD
                     YKTNGKFYVYSSREIVREKESLVHEIFGNHTTYVSEFKVSDNPNVADAGSERVLMMIE
                     QPQFNHNGGALEFGPDGKLYISLGDGGFADDWGWGHNKKIGNAQDLSNLLGKILRIDV
                     DSKSDGLEYGIPADNPFVNQKGARGEIFAYGFRNPWRMTFDTGGKHELFVADVQQHSY
                     EEVDIVTSGGNYGWRVLEGNQCFDYLNPNDHPKFCNADHKMIAPIIEYNHCVKFKGKN
                     CYGINVIGGSVYRGSHKSWQGKYFFGDWSMTFGGKSGRLYAATKSGGKWGFERANVTN
                     HDFKTHVLAVLQDLKGNIYALTSDSMGPFGSRDTVYKIVP"
     gene            2305..2742
                     /locus_tag="QF359_07955"
     CDS             2305..2742
                     /locus_tag="QF359_07955"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJO86879.1"
                     /translation="MTKVLQFINFALTLGPRLQPATFCPRQRKSSTSLAGMALVLFVF
                     SIAGGAGSANASPEAKALLQEKACGGCHFIPGVEDAYGDAGPSLKGMKTRKRLLGGRL
                     KNTPENMKAWLKDPASVKPGTLMPNLGITNEDADILIEYFKKI"
BASE COUNT          683 a          710 c          734 g          695 t
ORIGIN      
        1 accggaggtt cggggcgctt ggtagatcgc ctccagccct aacagacgca tcagacgacg
       61 aaccccgtga cggccaacgc attggccccc gcggcgcaat tgccggccat ctggcgagag
      121 ccgtaaaacg aatactttac gaacagctcg tcgatccgcc gcatcagcgc caggttctcc
      181 gcgctctcgc ctttcgcggt gtaattagta ccgcgagcga ctgagcgaga gaatgttgca
      241 ttgctggaca atactcagat ccaggttgac atgctcgatc atcgttttac gtttcttggc
      301 ggaacgcgcg ccaacccact agccaaaaaa tcccgttcca ccgccagttc cccgatcttg
      361 gcgtgcagat ggtggacttt ctcctcggga tcgctccctg ccttgtcggc gccgttggaa
      421 aatatcgcgc ccaaaccatc catggcctag cgcttccatg tgctcacctg gttcggatgc
      481 accttgcaat gaaccgcaat ctcctggatc gtcttgtcgc cgagaagcgc atcaagcgcc
      541 acctgggctt tgaaagcagc cgtgaaacgg cggcgtttcg tcatcttcat attcctcctc
      601 acagggcgga atacccttaa tctactgtcc gaattcctgg gaccagctca ttaacgcggt
      661 ttactaaagt ttattaacgc actaacattt gtgtcgttaa acttgtttga cggagaggtt
      721 ctgaaacaat tggttttctt tgtttacacg ccataatggc ttttttcaga ggctttgtgg
      781 tctaacctat agcttgtaaa atcagcgtgt tgctaaagct ttgctctagc aacaagaact
      841 aatgatactc aaaacaggag gaggtttatt gtgcgtacaa tacaaaaatt agctgcatcg
      901 gtagctgttt ccttggcgtt tattagcagc cctgcggcag cgttggatgt caaggttgag
      961 gcctttgcaa cagggctcgg ggctcctatc gacctcaagg aagcacccga tggtaccggg
     1021 cgaattttca tcatggaaca gacaggcgcg attgtcgtgg ttaatgccga cggtacgatg
     1081 aggccgaaac catttctcga cctgagagcc aagattgtca aacaatatgt tcgctttgat
     1141 gagcggggca cgctggggtt tgcgttccat cccgactata agactaatgg caaattttat
     1201 gtctattcga gtcgggagat tgtgcgcgag aaagaaagct tggtccacga gattttcggg
     1261 aatcacacca cctacgtttc cgagttcaaa gtctccgaca accccaatgt tgctgatgct
     1321 ggttccgaac gtgtgctgat gatgatcgaa cagccgcagt tcaatcacaa cggcggtgcg
     1381 ttggaatttg ggccagacgg caaactttac ataagccttg gcgatggcgg atttgctgat
     1441 gactggggtt ggggtcataa taaaaaaata ggcaacgcac aggacttgag caacctttta
     1501 ggtaagatct tgcggatcga cgtcgattca aagtctgatg gtcttgagta cgggattcca
     1561 gcggacaatc cttttgttaa tcagaagggt gctcggggcg agatcttcgc atatggtttt
     1621 cggaatccct ggcggatgac cttcgacacc ggcggcaagc acgagctttt cgtggccgac
     1681 gttcaacagc acagttacga ggaagtggac atcgttacca gtggtggcaa ctacggctgg
     1741 cgcgtattgg aaggaaatca atgcttcgat tacctcaacc cgaatgacca cccgaagttc
     1801 tgtaatgccg accacaaaat gattgcccca atcatcgagt acaatcactg cgttaaattc
     1861 aagggtaaga attgctatgg tataaacgtg attggtggtt ccgtctatcg cggcagccac
     1921 aagtcctggc agggtaaata tttctttggc gactggagca tgaccttcgg cggcaagagt
     1981 ggcaggcttt atgctgcgac caaaagcggt ggcaagtggg gctttgagcg ggctaacgtg
     2041 accaatcatg atttcaaaac ccatgtactg gccgttttgc aagaccttaa aggcaatatt
     2101 tatgccttga cgtcggattc catggggcca ttcggctctc gcgatacagt gtataagatc
     2161 gtaccgtaag cctaaattag ccggttagat tcctggtcgt cgaaaggcgg ccaggtttct
     2221 gccgttttgc agaacgatat cccctgtttg tattgtttaa tttcaattcg gaaagactaa
     2281 tttctcaaat agaaaagacg aataatgacg aaggtactcc agttcattaa ttttgctctg
     2341 acgttaggtc cccgtctcca gcctgccact ttctgtccga gacagcgcaa gtcgtccact
     2401 tccttggctg gtatggcact ggtgcttttt gtctttagca ttgctggggg tgccggaagc
     2461 gctaacgcat cgcctgaggc caaagcgctc ttacaggaaa aagcgtgtgg cggctgccac
     2521 ttcattcccg gtgttgaaga cgcctacggc gacgccgggc cgtccctgaa gggtatgaaa
     2581 acgcgaaaac gcctgcttgg ggggaggctg aaaaacaccc cggaaaacat gaaggcatgg
     2641 ctaaaggatc ctgcttctgt aaaaccgggc actttgatgc caaatctagg cattaccaac
     2701 gaggacgccg atatcttgat cgaatatttc aaaaaaatct gagcccccaa gctagcgctc
     2761 aaatgctaca agccctcctt cgtctacaag cgtgctaccg ggggggctcc agaaaatgcc
     2821 gc
//
LOCUS       DASCNL010000595         3685 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001232980, whole genome shotgun sequence.
ACCESSION   DASCNL010000595 DASCNL010000000
VERSION     DASCNL010000595.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001232980"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            490..2052
                     /locus_tag="QF359_07960"
     CDS             490..2052
                     /locus_tag="QF359_07960"
                     /inference="COORDINATES: protein motif:HMM:NF015558.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HJO86880.1"
                     /translation="MVYTKKHPALLIMGIIFIAIAYLTDSGSMTGLIGYLSAKKFVGE
                     MVGMGYAFGAIGIIIGVWHMWGQHKEGNVDYYLSTIAGAIFILLVAMIVRWYAAPLVA
                     VASKAIGPVMGAKYLHQVLGLNYVVLGILAGIITVNVFGIPEWAENGVRLSRLGLKTG
                     VILLGTLYSLGELASLGSLSAVMVGIFVLGAVGMVLWLGRRRKIPNSMSGVLSAGMGV
                     CGVSATVAAAPVVQAKSVEIAYTIGTILIWGVGCMFLFPVFGHMLDLGHIQFGAWAGT
                     GILNSAQVAGAALAFQPDGIETLKVAEIFNITRVLFLPIIVLWLAVWYVRLEETDPGH
                     TVNVGTVIFEKFPVFVLGFILMFALSSTGVFAPAQHYKGKFFDNNIKAGKLLKTGHVA
                     TLTAEASKLKRADRKQAMASLIENKKIMSIEDETIIRGIYNAKILSKGSNKVLKKATK
                     AVRHTAKMIKKFRQWITLLFAFGLTGLGMQITVAAMKQAGGQPLVIGGIVGTTKAILS
                     LIVILLFVKETI"
     gene            2067..2231
                     /locus_tag="QF359_07965"
     CDS             2067..2231
                     /locus_tag="QF359_07965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86881.1"
                     /translation="MSEHDSQDIDLQEEAGAKFHRGSALSIFVSDRREDFLALIFALL
                     IALGVYIFIG"
     gene            2309..2776
                     /locus_tag="QF359_07970"
     CDS             2309..2776
                     /locus_tag="QF359_07970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HJO86882.1"
                     /translation="MKIVKIIVASHGTPGAKVAETTALNLARENGALLHHLLVVPDFW
                     KGMKGDDWLNNAVTQFRFGNYVENQLAQEAAGEIDRLAGLAAGKSVSYSHDIQLGKPT
                     DCLIKECDAGIFDVAVIGSPRPRGVPGYRSRMALEKLVRGLTAQLIITPRPDQ"
     gene            2773..3390
                     /locus_tag="QF359_07975"
     CDS             2773..3390
                     /locus_tag="QF359_07975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86883.1"
                     /translation="MNDTPPNEDQDAAWVTIETPFNADWLEEFIGDIERLYRINSLME
                     FLELRQTSHRGYHLDAKNLSNGKTLKTNLSIIPGKNKVQVIYSTGLKTSTKFRINLKP
                     GGKAELVITDEYGGTSAKEREARIDEADKSLVQWGRDIHRYLRLWKRWSRVPGWKWYM
                     RRVWQPLKPSARRISFMLIMITLVEFIIFLIIFAIFWLELYRYVD"
     gene            3549..3685
                     /locus_tag="QF359_07980"
                     /pseudo
     CDS             3549..3685
                     /locus_tag="QF359_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087397.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          868 a          937 c          949 g          931 t
ORIGIN      
        1 caagtggcct aaggcaccgg cttttgatgc cggcattcgg aggttcgaat cctcccgccc
       61 cagccaattt tctaaattaa ttaaggggct gacccagcta actagttcaa atatagctca
      121 acccattgtt ttatttatct taattgtatc tttctcattg cccccatgat aacacctaaa
      181 tggcgttaga tgggctagcc ccttaatatt ctttcgatac gcatcaatcg tcaccaataa
      241 tactttttag gcgtcttgac ttcacgtgct tgtgaagcat atggtgtact gtcttaaaaa
      301 ttattttaca gggtattagc gtgaaatatc agggggtcta gtctcgctta ttaatgaatt
      361 aaatcttttc caatgtcgcc aaatccggtt gtaaccagat gaattcagtt atttcctgaa
      421 aagtattgga tacattgggc ctgccccacg gtatcagcgc tgagtttaat attttagggg
      481 gtttcaaaga tggtttatac caaaaaacat cctgccctac tgattatggg cattattttc
      541 atcgctatcg cctatctgac cgattccggt tctatgactg gattgattgg gtatctgtcc
      601 gccaaaaaat ttgttggtga aatggtcggt atgggttatg cgttcggcgc gatcggcatc
      661 atcatcggcg tctggcatat gtggggtcag cataaagaag gcaacgtgga ctactacttg
      721 tccaccattg ccggtgccat cttcattctt ttggtcgcca tgatcgtacg ctggtacgcc
      781 gcgcctttgg ttgcagtggc cagtaaggcc attggacccg taatgggggc caagtacctg
      841 catcaggttc ttggactcaa ttacgtggtg ttgggcattc tggccggcat catcaccgtc
      901 aatgtgttcg gcatccccga atgggcggaa aacggcgtac gtttatccag gcttggtctg
      961 aaaacgggcg ttatcctgct gggtacactt tacagcctcg gcgaactggc ctcgctcggc
     1021 agcttgtcag cggtaatggt cggtatcttc gtcttgggtg cggtcggcat ggttttatgg
     1081 ctgggacggc gaagaaagat ccccaactcc atgagcggcg tactgtccgc cggcatgggc
     1141 gtctgcggcg tctcggcgac ggtcgccgcc gcgccggttg tgcaagctaa atcggtggag
     1201 atcgcctata ccattggcac catcctgatc tggggcgtcg gctgtatgtt cctgttcccg
     1261 gtgttcggcc acatgctgga cctgggtcat atccagttcg gcgcttgggc cgggaccggc
     1321 attttgaatt cggcgcaggt cgccggcgcc gcactggcct ttcaaccgga cggcatcgag
     1381 actctgaaag ttgccgaaat cttcaacatc acccgcgttt tgttcctgcc aattatcgtt
     1441 ctttggctgg ccgtctggta tgtgcgcctc gaagaaacgg atcctggcca caccgtcaac
     1501 gtcggcaccg tgatcttcga gaagttcccg gtcttcgtac tcggcttcat tctgatgttc
     1561 gcgctttcct cgacgggcgt gttcgctccg gcgcagcatt acaaggggaa attcttcgac
     1621 aacaacatca aggccggaaa gcttcttaag acggggcacg tggcgactct cactgccgaa
     1681 gctagtaagc tgaaacgggc agatcgcaag caggccatgg ctagcctaat tgaaaacaag
     1741 aagatcatga gcatcgaaga cgaaaccatc attcgtggca tctacaatgc caagatcctg
     1801 tccaagggtt ccaacaaggt gctcaagaag gccactaaag cggtcaggca cacggcgaag
     1861 atgatcaaga aattcaggca atggatcacc cttcttttcg ccttcggctt gaccggtcta
     1921 ggcatgcaga tcaccgtcgc ggcaatgaaa caggcgggcg ggcaacccct tgtcatcggc
     1981 ggcattgtcg gaaccaccaa ggcgatttta tccttgatcg tgatcttgtt gttcgtaaaa
     2041 gaaaccatct aacaggagga cgggaaatgt cagaacatga tagtcaagac atcgaccttc
     2101 aagaagaagc tggcgcgaag tttcaccgcg gctcggcgtt gtcgattttc gtcagcgacc
     2161 ggcgtgagga ttttctcgcc cttatatttg cgctgcttat cgcgcttggg gtctatattt
     2221 ttataggcta acgggcgtga atgcactccg agactcggcg ccttagttgg gcgccgggtt
     2281 ttcacttgac catccatagg atcgccacat gaaaatcgtt aaaatcattg tggccagtca
     2341 cggcaccccg ggcgccaagg tagccgaaac aacggcgctg aatctagcaa gggaaaacgg
     2401 cgctttactt caccatttac tcgtcgtacc cgatttttgg aaaggtatga agggtgacga
     2461 ctggcttaac aacgcggtga cccaattccg gttcggcaac tacgtcgaaa accaactcgc
     2521 ccaggaagct gcgggggaga tcgaccgctt ggccggactg gcggcaggaa aatccgtctc
     2581 ctattcccac gatatccaac tcggcaagcc gaccgactgc cttatcaaag aatgcgacgc
     2641 cggcattttc gatgttgccg tcatcggttc tcccaggccg aggggtgtgc ccggataccg
     2701 gtcgcgcatg gctcttgaga agctggttcg cggccttacc gctcaactca ttatcacacc
     2761 ccgcccggat caatgaacga cactccaccg aacgaagatc aagatgccgc ctgggtcacc
     2821 atcgaaaccc ccttcaacgc tgactggctc gaggaattta ttggtgatat agagcgtctc
     2881 tatcgtatta attcattgat ggagtttctg gaactgcgcc aaactagtca ccgtggatac
     2941 cacttggacg caaaaaacct cagtaacggc aagacactta aaacgaacct gtcaataatc
     3001 cctggtaaga acaaggttca ggtcatttat tcaactggac ttaagacatc aaccaaattc
     3061 cgcattaacc tgaaaccagg cggcaaggcc gaactggtga ttacggacga atatggaggg
     3121 acatcagcca aagaacgcga agcccgcatc gatgaagcag acaaaagcct ggtacaatgg
     3181 ggccgtgata ttcaccgtta tttgcggcta tggaagcgat ggtccagggt tcccggatgg
     3241 aaatggtaca tgcggcgcgt ctggcagccg ttgaaaccat cggcaagacg catatcattc
     3301 atgttgatca tgataacgct ggtcgaattc atcatattcc tgataatttt tgcaatcttt
     3361 tggttggaac tctatagata cgttgactga ccacattttt ctgaattggg atggtccgaa
     3421 gtatctttta gtagggaata aaccctctac ccgggctgct aactcatcac taaatttttt
     3481 tgcgcatgtg accggcactt gaccttgaat aagcaatgtc gcgaaaccac cttatttaac
     3541 aagagactga tcgtcgtgtt gatgatttaa ccaacgagat cgaggctctg gttaaagctg
     3601 atgatggctg tcagcgttta atgaccatcc ctggcgttgg tccgttgacc gccagcgcca
     3661 tggtcgcggc tgttggtgat ggcgc
//
LOCUS       DASCNL010000596         1512 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001234306, whole genome shotgun sequence.
ACCESSION   DASCNL010000596 DASCNL010000000
VERSION     DASCNL010000596.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001234306"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="QF359_07985"
     CDS             <1..244
                     /locus_tag="QF359_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HJO86884.1"
                     /translation="LLVPDCVELTKDNLSGLKWLPPSCAYRLLNEGKELEWWHPLISG
                     DPNTVHEAGVSVRGRIIEEKDAGDFENYIVTWPEEE"
     gene            241..945
                     /locus_tag="QF359_07990"
     CDS             241..945
                     /locus_tag="QF359_07990"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013980.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HJO86885.1"
                     /translation="MMKNEFSKVISLDGRDVPVRIRRNKRARRIILKVDSDTEGAVVT
                     LPNRASEREALLLVQEKSDWLLARLNDLPAKISFQDGAHIPLLGQNYLLRHDPDLKGV
                     ALKENNTICIGGRSEHFARRLTDWLKKKAKAEILARASDFAAKIDCRLGRITVRDTRS
                     RWGSCSPNGNLSFCWRLIMTPDGALDYVVAHEVSHLRHMDHSPAFWQTVESLGVRVDE
                     ARRWLNDNTEKLQRYG"
     gene            complement(982..1140)
                     /locus_tag="QF359_07995"
     CDS             complement(982..1140)
                     /locus_tag="QF359_07995"
                     /inference="COORDINATES: protein motif:HMM:NF018070.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcB family DNA repair protein"
                     /protein_id="HJO86886.1"
                     /translation="MTRGICRYLRNLGYSPLTEYKLLTRRRVDVIGVNKASQFIIVEI
                     KSSVADYY"
     gene            1307..>1512
                     /locus_tag="QF359_08000"
     CDS             1307..>1512
                     /locus_tag="QF359_08000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HJO86887.1"
                     /translation="MQQAQENLSIKTTGQGLYELTSDVVDWSNGLAFDTGLLTLYCRH
                     TSASLVIQENADSDVMRDLETFFK"
BASE COUNT          387 a          328 c          418 g          379 t
ORIGIN      
        1 gctcttggtg ccggattgtg ttgaactgac caaagataac ctcagtgggt tgaaatggtt
       61 accaccgagc tgtgcctacc ggttgttgaa tgagggtaaa gagcttgaat ggtggcatcc
      121 gctgatttcc ggtgatccga atacggttca tgaagcgggg gtttcggtgc gggggcgcat
      181 tattgaagag aaagatgccg gtgatttcga aaactatatt gtgacttggc cagaggaaga
      241 atgatgaaga atgaattctc gaaagtcatt agcctggatg gccgtgatgt gccggtgcgc
      301 atccggcgca ataaacgcgc acggcggatt attctaaaag ttgatagtga tacagaaggc
      361 gccgtggtga cgctgccgaa ccgggccagc gaacgggaag cgttgctact ggtgcaagag
      421 aaatcagatt ggctgctggc caggctcaat gacttaccgg ccaagatatc atttcaagat
      481 ggtgcacata ttcctttgtt agggcaaaac tatctgctgc gtcatgatcc agatttaaag
      541 ggcgtcgccc tcaaggaaaa caacaccatt tgcatcggtg gccgttccga acatttcgcc
      601 cggcgtttga ccgattggct caaaaagaag gccaaagctg aaatcctggc gcgggccagc
      661 gattttgccg ccaagattga ttgtcggctt ggtcgcataa ccgtgcgcga taccagatca
      721 cgctgggggt cgtgctcacc caacggtaat ttatcttttt gctggcgatt gataatgacg
      781 ccggatgggg cgcttgatta tgtggttgcc catgaagtat ctcatttgcg ccatatggat
      841 catagcccag ccttttggca gacggttgag agtctcggtg tgcgggttga tgaggcgcgc
      901 cgctggttga acgataacac cgaaaagtta caacgctacg gttaaaaaaa tactctacgt
      961 gcgcaagctt cggatagttt tctaataata atcggcaacc gaagatttaa tctcaacaat
     1021 aatgaattgg ctggctttgt tgacgccaat aacatcgacc cggcgtctgg tcagtaattt
     1081 atactcggtc agagggctat agccaagatt gcgcaaatag cggcaaatgc cgcgggtaat
     1141 atagccggcc cgagcgccgg aatatcttgt tcaaactctt ccagtcccat tttttgttca
     1201 ttatttgttc caaccagaga ctgaccttaa acgaattagc cggtctgagg caagaggcct
     1261 tttaaattgg tgggcagctt gggaaaaaga gggtaaaagc gtgaccatgc aacaggcaca
     1321 agaaaatctg tctattaaga cgaccggtca gggattatat gagctgacca gcgacgtcgt
     1381 tgattggagt aatggattgg ctttcgacac tgggttgctg acactttatt gccgccatac
     1441 gtcggcatct ttggttattc aggaaaacgc cgattcggat gtgatgcgcg atctcgagac
     1501 attctttaaa ca
//
LOCUS       DASCNL010000597         1256 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001236194, whole genome shotgun sequence.
ACCESSION   DASCNL010000597 DASCNL010000000
VERSION     DASCNL010000597.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1256)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1256)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001236194"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="QF359_08005"
     CDS             <1..357
                     /locus_tag="QF359_08005"
                     /inference="COORDINATES: protein motif:HMM:NF024844.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HJO86888.1"
                     /translation="LIYFDEKAAKNKGYSGIPVPPTFAFTLAMEAGQSFNILADMGIP
                     KTQAMHGEQGFTYHEPIYAGDAVTGIQRITDIYEKKGGALQFIEAVIELRNQNDTHLA
                     DLRSVIVVRHNVEEKG"
     gene            357..779
                     /locus_tag="QF359_08010"
     CDS             357..779
                     /locus_tag="QF359_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HJO86889.1"
                     /translation="MSNTVDYADLNVGDQIPDMVKENISRTQLALFAGASGDHNPIHL
                     DDEEAKSGGLPGVIVHGMLTMAFLGQALTGWVPVSRVRSWNARFVAMAFPGDTITSKG
                     VIVEKVSEDGEDRVKLDISAENQNGEKILVGSAVVAIS"
     gene            799..>1256
                     /locus_tag="QF359_08015"
     CDS             799..>1256
                     /locus_tag="QF359_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HJO86890.1"
                     /translation="MKIGIDVGGTFTDFFLVKDGEAPLIHKTLSTPEDLSIAVLEGMK
                     DLAGMMEPAMSPENFAKELDTIVHGTTVTTNATLTRRGAKSALLTTKGLRDALEMRRG
                     IREEQYNNRYTNVVPLAERYLRTGVGGRLDRNGKELEPLSKQDILDAIEL"
BASE COUNT          336 a          290 c          324 g          306 t
ORIGIN      
        1 ctcatttatt tcgatgaaaa agcggctaaa aacaaaggtt attctggtat tccggtgccg
       61 ccaacttttg cttttacgct ggctatggag gctggtcaat cgttcaatat actggcagat
      121 atgggcatcc caaaaacaca ggcgatgcat ggcgaacaag gttttactta ccatgaacca
      181 atttatgctg gcgacgcagt aaccggcatt cagcgtatca ccgatattta tgaaaaaaag
      241 ggtggtgcat tgcagttcat tgaggcagtg atcgaattgc gaaatcaaaa cgatactcat
      301 ctagcagatt tacgctctgt aatagtcgtg cgccataatg tcgaggagaa gggctaatga
      361 gtaacactgt cgattatgcc gacctcaatg tcggcgacca aatccccgat atggtcaaag
      421 aaaatatcag tcggacgcag ttggcgcttt ttgccggcgc ctccggtgat cataatccca
      481 ttcatctgga tgacgaggaa gccaaatcag gtggcctgcc cggtgtcatt gtccacggca
      541 tgttaacgat ggcttttctc ggtcaggctt tgaccggttg ggtgcctgta agtcgagtgc
      601 gcagttggaa cgcccgcttt gtcgcaatgg cttttccagg cgatacaatc accagcaagg
      661 gtgtgatcgt ggaaaaagtt tccgaagatg gtgaagaccg ggtcaaactc gatatttcgg
      721 ctgagaacca aaacggcgaa aaaattttgg tgggctcggc ggttgtcgca atttcttaag
      781 aagactggat agaagactat gaaaatcggc attgatgttg gcggcacgtt taccgacttt
      841 ttcctcgtta aagatggaga agcaccgctt attcacaaaa cactttcaac cccggaagac
      901 ctttcgatcg ctgtcctgga aggcatgaaa gatctcgctg ggatgatgga accggcgatg
      961 tcgccggaaa attttgccaa agaacttgat accattgttc acggcacgac agtgacaacc
     1021 aatgcaacac tgacccgccg aggcgccaaa tctgcattgt tgacgaccaa aggcctccgc
     1081 gatgcgctgg aaatgcgccg tggtattcgc gaagaacagt acaataaccg ctataccaat
     1141 gttgtgcctt tggctgagcg ctatcttcgc accggtgtcg gtggccgttt ggaccgtaac
     1201 ggcaaagaat tagagccgct atcgaagcaa gacattctcg atgccattga actgta
//
LOCUS       DASCNL010000598         1123 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001237472, whole genome shotgun sequence.
ACCESSION   DASCNL010000598 DASCNL010000000
VERSION     DASCNL010000598.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1123)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001237472"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(180..>1123)
                     /locus_tag="QF359_08020"
     CDS             complement(180..>1123)
                     /locus_tag="QF359_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238750.1"
                     /note="molecular chaperone; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HJO86891.1"
                     /translation="GIVDSEDLPLNVSREMLQHNVLVGHIKKALVKRIFSELKKKATK
                     KAEEYATFWDNFGAVLKEGLYEDHENRDKLLELVRFKSTESDNLVSLEDYVGRMNEGQ
                     EEIFYISGEDTETLKSSPQIEGFKSRGVEVLLMTDPIDEFWLPMVHVFNKKPFKSVTS
                     SDIELGKIKRSDEAGEEKEKPEAADDAAVAKLLIAFKEELGDAVKDVRASDRLTDSAV
                     CLVAGEGDMDLHLERMLKSQGHMDVPTSARVLEINSTHDLIKQLSGLTDDLTRKEDLQ
                     NMAHLLLDQARISEGEAVSDPAAFSKRLNSALAKGLV"
BASE COUNT          259 a          297 c          260 g          307 t
ORIGIN      
        1 ggtttggata cttcgccatg acgtaaaatt gggtgatccg atccatgtcg aaggcacaga
       61 aaaacgcgtc tggggcgcac gtgatgccga cgcgccgcaa ggcttccgcg ccgaaccggt
      121 gccggtagaa gtccgcgccc tgttgagtgg ggagtaggtt agttctaccc caccagctct
      181 taaaccaaac ctttcgccaa agcgctattg aggcgttttg aaaaggcggc cggatcgctg
      241 actgcttcac cttcgctaat acgcgcctga tcgagcaaca gatgcgccat gttctgaagg
      301 tcttcttttc tggtcaaatc atctgtcagg ccggatagct gcttgattag atcgtgggtc
      361 gaattaattt cgagcacccg ggcactggtc ggcacatcca tatgcccctg gcttttgagc
      421 atgcgctcga gatgtaaatc catatcacct tcaccggcaa ccaggcagac cgcactatcg
      481 gtcagacgat cggaggcgcg gacatcctta acagcatctc cgagctcttc tttaaaggcg
      541 attagcaatt tggcgacagc cgcatcatca gcggcttccg gtttttcttt ttcttcacct
      601 gcttcatcac tgcgtttgat cttaccaagt tcgatatcgc tggaagtcac cgatttaaat
      661 ggttttttgt taaagacatg gaccatcggc aaccagaatt catcaatcgg gtcggtcatc
      721 agcagcactt caacaccgcg tgatttaaag ccttcaattt ggggtgacga tttaagcgtt
      781 tcggtgtctt caccggaaat gtaaaaaatt tcttcctggc cctcattcat ccgcccgacg
      841 taatcttcta ggctgaccaa gttgtcgctt tcggttgatt taaagcgcac caattccaat
      901 aatttatcac ggttttcatg atcctcgtag agaccctctt tgagaacagc gccgaaatta
      961 tcccaaaacg ttgcatattc ctccgctttc ttggttgcct tctttttcaa ttcagagaag
     1021 atgcgtttaa ccagtgcttt cttgatatga ccaaccagca cattgtgctg cagcatttct
     1081 cggctgacat tgaggggcag atcttctgaa tcaacaatgc cgc
//
LOCUS       DASCNL010000599         1535 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001241513, whole genome shotgun sequence.
ACCESSION   DASCNL010000599 DASCNL010000000
VERSION     DASCNL010000599.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001241513"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1535)
                     /locus_tag="QF359_08025"
     CDS             complement(<1..>1535)
                     /locus_tag="QF359_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HJO86892.1"
                     /translation="SEVEKDVRSGFIRVKAKSGIPFEKPDVYIEGPELIFFGKPVANL
                     SHDGVVATIKVPVSEEEKAKIVNASLRLTLKDGARSAERTLTVTEGKSAPTITKTLPF
                     SLPTILAFALLGGLILNLMPCVLPVISLKILGVVAHGGAEDRTVRMSFIASSLGIITS
                     FLAIAGGLVGLKLSGAAVGWGIQFQHPWFIVGLSVLVTLFAYNLWGIFEFRLPSWISD
                     RTSASTGQAQDHQSFGGNFATGAFATVLATPCSAPFLGTAVGFALAGGTFDIFAVFLA
                     LGIGMALPFISIALYPHLTSRMPKPGNWMNTLKKILGAALAATAIWLLSVLAIQLSTS
                     VALIVGALMIAMGLVLVLRNRLSESRQKLASLGIIVVIIGAFWTPYTYTPSAALLNTS
                     MKEAYWHPFAPETIPGHVAEGKTVFVDVTAEWCITCLVNKVTVLNRGQIHELLSSGKV
                     IAMQADWTRPDPKIAAYLKSFGRFGIPFNAVYGPGAPLGKTLPELLTTAIVLDGLTEA
                     SKG"
BASE COUNT          379 a          396 c          441 g          319 t
ORIGIN      
        1 tacccttcga tgcttccgtt agtccgtcca ggacaatagc cgtggtcagc aattcgggca
       61 gggttttacc taagggcgca cctgggccgt aaacggcatt aaacggaata ccaaaccggc
      121 caaaactttt gagataggcc gcgatcttgg gatcgggccg ggtccaatcg gcctgcatgg
      181 cgatcacttt accgctcgat aaaagttcgt gaatttgacc acgatttagc accgtgactt
      241 tattgaccag gcaggtgatg caccactcgg cggtgacgtc gacaaagacg gttttgccct
      301 cggcgacgtg tccgggaatg gtttcaggcg cgaatgggtg ccaatacgct tctttcattg
      361 aggtgtttaa aagtgctgcg gagggtgtgt aagtataggg cgtccagaag gcaccgataa
      421 taacgacaat gatgcccagc gaggcgagtt tctgccggct ctccgataga cgattgcgca
      481 gcaccagcac gaggcccatg gcgatcatca aggcaccgac gatcagagcc acgctggtgc
      541 tgagttgaat ggccaaaact gacagcagcc agatcgctgt ggcagctaag gcagcgccaa
      601 gaattttttt caaagtattc atccaattgc cgggtttggg catacggctg gtgaggtgcg
      661 ggtacagcgc gattgagatg aacggtagtg ccataccaat accaagcgcc aagaagacgg
      721 caaagatgtc aaacgtgcca ccggctaagg cgaaaccgac ggcggtaccg agaaaaggcg
      781 ctgaacacgg tgttgctaaa acggttgcaa aagcgccggt ggcgaagtta ccgccaaaac
      841 tctgatggtc ctgagcttgg ccggtcgaag cgctggtccg gtcgctaatc caggagggca
      901 ggcgaaattc gaagattccc cagagattgt aagcgaacag cgtaaccagc acgctcaagc
      961 cgacaataaa ccagggatgc tggaactgaa tgccccagcc tactgcggcg ccggaaagct
     1021 tcaagccgac cagtccgccg gcgatcgcca ggaaagacgt aataatacca agcgaggaag
     1081 cgataaaact cattcgcacg gtgcggtctt cggcaccgcc atgggcgacg acaccaagaa
     1141 ttttcaacga tatcaccggc agcacacagg gcattaggtt caagatcagt ccgccgagga
     1201 gggcaaaggc taggatcgta ggtaaggaaa atggcagggt tttggtgatg gtcggcgctg
     1261 acttaccttc cgtgacggtc agtgtacgct cagctgaccg cgctccgtct ttgagtgtga
     1321 gccgtaggct ggcattaacg attttcgctt tttcctcttc cgagaccggc actttaattg
     1381 tcgccaccac accgtcatga ctgaggttgg ctaccggctt gccaaaaaag atcagttccg
     1441 gtccttcaat atagacatct ggtttttcga acgggatgcc gcttttggct ttaacccgga
     1501 tgaagccgct gcggacatct ttttcgactt cgcta
//
LOCUS       DASCNL010000600         1325 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001241714, whole genome shotgun sequence.
ACCESSION   DASCNL010000600 DASCNL010000000
VERSION     DASCNL010000600.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001241714"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1286
                     /locus_tag="QF359_08030"
     CDS             <1..1286
                     /locus_tag="QF359_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HJO86893.1"
                     /translation="IHDQEQFGETIRNILEDLDLPAESEGEGEGEQGDESDQENSEDQ
                     EQVDSEDAQQDGGDEDGDHGDMDFEDLDPDELEDMEDMAAEETEEDPASSMQGQPQRP
                     DFPDGKVETYRAFTISHDEIIAAEELCEPEELTRLRGQLDQQLSHMQSVVSRLANRLQ
                     RKLMAQQQRWWEFDLDEGILDAGRLSRVVTNPMHPLSYKVENESSFRDTMVTLLIDNS
                     GSMRGRPISVAAMSADIISRTLERCAVKVEVLGFTTRAWKGGQAREEWVAAGKPANPG
                     RLNDLRHIIYKAADSPWRRARKNLGLMLREGLLKENIDGEALLWAYNRLIGRPEQRRI
                     LMVISDGAPVDDATLSVNPGNYLERHLRDVIDYIENISPIEITAIGIGHDVTRYYRRA
                     VTINDAEELGGTMMQNLTELFDNESNRRKNPTTRH"
BASE COUNT          345 a          335 c          351 g          294 t
ORIGIN      
        1 gcatccacga tcaggaacaa tttggcgaaa ccatccgcaa catcctcgaa gaccttgatt
       61 taccggctga atccgaaggt gaaggcgaag gtgagcaggg cgacgaatca gaccaggaaa
      121 attctgaaga ccaggaacaa gttgatagcg aagatgctca acaagatggc ggtgacgaag
      181 acggcgatca tggagacatg gactttgaag acctcgaccc ggacgagctt gaagatatgg
      241 aagatatggc cgcagaagag accgaagaag accccgcttc ttcgatgcaa ggccagccgc
      301 agcgcccgga tttcccggat ggcaaagttg aaacctaccg tgccttcacc atatcccatg
      361 acgaaataat cgccgccgaa gaactttgtg agccggaaga actaacgcgc ctccgcggtc
      421 aattggatca acagctttcc catatgcaaa gcgtggtctc ccgcctcgcc aaccgcttac
      481 agcgtaaatt gatggcgcaa caacagcgtt ggtgggagtt tgatcttgat gaaggtattt
      541 tggatgccgg gcggttgtcg cgtgtcgtta ccaatccgat gcacccgctt tcctacaaag
      601 tcgaaaatga atctagtttc cgggatacca tggtgacatt gttgattgat aattccggtt
      661 ccatgcgggg ccggccaatt tcggtggctg cgatgagtgc tgatattatc tcacgcacct
      721 tggaacgctg cgcagtgaaa gttgaagttc tcggctttac cacgcgtgcc tggaaaggcg
      781 gccaagccag ggaagaatgg gtcgctgccg gcaaacctgc caatccgggc cgacttaacg
      841 atctgcgcca cattatatat aaagccgccg attcgccatg gcgccgcgcc cgcaaaaacc
      901 tcggcctgat gttgcgtgaa ggcctgttga aagaaaacat cgatggtgag gcgctgttgt
      961 gggcctataa ccgcctgatc ggacggcctg aacaacgccg tattctaatg gtaatttctg
     1021 acggagcacc ggtggatgat gcgaccctgt cggtcaaccc cggcaattat ctcgagcgtc
     1081 atttacgcga tgttatcgat tacatcgaga atatctcacc catcgagatt accgcgatcg
     1141 gtattggtca tgatgtgact cgctattatc gtcgcgccgt caccatcaat gatgcggaag
     1201 agttgggcgg cacgatgatg caaaatctaa ctgaactgtt cgacaatgag tcgaaccgtc
     1261 gaaaaaaccc gactacccgt cactaaattt ctgatttatt tgctgataat ttagatatta
     1321 ctttg
//
LOCUS       DASCNL010000601         1404 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001242171, whole genome shotgun sequence.
ACCESSION   DASCNL010000601 DASCNL010000000
VERSION     DASCNL010000601.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001242171"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="QF359_08035"
     CDS             complement(<1..642)
                     /locus_tag="QF359_08035"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO86894.1"
                     /translation="MGNIDIYSTVAWSAGAGCHGGCGQMLHVQDGKMVKIEGDESHPF
                     NQGRSCPRVLALTQYMYHEDRITQPMKRVGERGSGKFEPISWDDAFDYCEAEMNKIKN
                     QNGPESIVFAQGTGRDIGGPISFLAYSYGSPNWVQLGLSGQSCYTPRLGAMKAVQGDF
                     GVSDCSQFLEKRYDDPEWEVPEVIIVWGQHPPNGCPDAFFGHWIVDCMKRGTKI"
     gene            complement(744..>1404)
                     /locus_tag="QF359_08040"
     CDS             complement(744..>1404)
                     /locus_tag="QF359_08040"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO86895.1"
                     /translation="SSSSLKYTTAAHGAVGLASLPIVTLILAWLFGREQMSRIKIFSV
                     VLAFLGVTVAVSDSLFAEAAGKDLLLGDILMLLATLAVAVYTIFAKPYIARYGPFFFT
                     ALAMVIGVTSLAFVVGYNGGLSAWPQFSPLGWWLLIFLGVIGGAIQFTAYIWALRWIP
                     PSQAGIALTLTPISAFIIAWPALGEPITIEAVIGLALVLTAIFLINRTPPEGRIKIEP
                     G"
BASE COUNT          395 a          347 c          336 g          326 t
ORIGIN      
        1 gattttggtg ccgcgcttca tgcaatcgac aatccaatgg ccgaagaaag catctgggca
       61 gccgtttggc ggatgctggc cccagacgat aataacttcc ggtacttccc attcgggatc
      121 gtcgtaacgt ttttccagga attgtgagca atcagataca ccgaagtcgc cttgcacagc
      181 tttcatcgcg ccgagccgtg gcgtgtaaca agactgacca gagagaccta attgcaccca
      241 gttggggctg ccataactat aagccaggaa cgagattggc ccaccgatat cgcgtccggt
      301 accttgggca aagacgattg attcaggacc gttttgattc ttaatcttgt tcatctcagc
      361 ttcacagtaa tcaaaagcat catcccagga aattggctca aacttgccgg agccgcgttc
      421 acctacgcgc ttcatcggct gagtaatacg gtcctcatga tacatgtatt gggttagagc
      481 taatacgcga gggcaagagc ggccttgatt aaaagggtga ctttcatcac cttcaatttt
      541 gaccatcttg ccgtcttgga cgtgcaacat ttgaccacag ccgccatgac aacccgctcc
      601 ggctgaccag gcaactgttg aatagatatc aatatttccc aaaactactt ccttccctgc
      661 acttgaatat catcatgata taactataat ttataatggt tgcaattgaa actatttttc
      721 aacagaaagc gttataaagc gaattaacct ggttcaattt taatccgacc ttccggtggt
      781 gtccgattga ttaagaatat ggcggttagc accagggcaa ggccaattac agcttcaatg
      841 gtaatcggtt cgccgagggc tggccaagcg ataatgaacg ctgaaatggg tgttagagtt
      901 agcgcaatgc cggcctggga tggtggtatc cacctgagcg cccaaatata agcggtaaat
      961 tgaatggccc cgccaattac gcctaggaat attaacagcc accaaccgag cggtgagaat
     1021 tgcggccatg ccgatagacc accgttgtag ccgaccacaa aagccaatga agtaacaccg
     1081 ataaccatcg ctaaagcagt gaaaaaaaaa gggccatagc gcgcgatgta aggtttggcg
     1141 aaaatggtgt agacggcaac tgccagggtt gccaacaaca ttaatatatc gcccagcaag
     1201 aggtcttttc cggcagcttc agcaaataac gaatcactga ccgcaacggt tacacctagg
     1261 aaagccagaa cgacactgaa tatttttatt cgtgacattt gttcccggcc aaataaccag
     1321 gccagtatca aagtgacgat aggcagcgat gccaacccga cagcgccatg ggcagccgtg
     1381 gtgtatttga gagagctgct ggac
//
LOCUS       DASCNL010000602         2149 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001243925, whole genome shotgun sequence.
ACCESSION   DASCNL010000602 DASCNL010000000
VERSION     DASCNL010000602.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001243925"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..758
                     /locus_tag="QF359_08045"
     CDS             <1..758
                     /locus_tag="QF359_08045"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HJO86896.1"
                     /translation="VPKEHAKFARAQVVGNLVIVSGCQALDHNTVKVETMDFTEQSEI
                     VLEKIKIGMEETGGSLASVVKTNVFLKDLNELARYRDVEREFYQRHVPDIGNNLPAST
                     TIIVDELPRPEFLVEVEAIGVADDKDLNWQVTFTPGDKDASATVSAGNLVFLSGCDSA
                     DTGTVEQQINTALDKVRTNLEVAGSSMDKIVKTLMMLRHIEDYPKMRKVEIEYYERHA
                     LHLVANPPVSTFVQLPEITRPDTLFQIDVTATR"
     gene            complement(765..2006)
                     /locus_tag="QF359_08050"
     CDS             complement(765..2006)
                     /locus_tag="QF359_08050"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86897.1"
                     /translation="MDMAIEGLAEEHQILWQSVHDFVNDVIKPFIKEDPDREWNAAPE
                     DRVPRKIFEAVDKLGIRCIGVPEKFGGVEVDPTIESLVCTLVAMELARGDCGLADKLI
                     QTWKLSVLIRTYASERIQEEWFPEIVADPTFLMGHAVSEPRGSSDRWLPYNVPESNMD
                     TKAVFDNGEWVLNGVKHFITNGYDGNLFIVYANTNSDVGVLEGTSSFVVPRDTPGVSI
                     ARCNETIGARLMNNGEIVLEDVRLPEDHLLVKNDGLPKAEIVFYRLGKLLQAAKNIGV
                     GQDAFDTTAAWVQEHVQGGKILIKHQAVAARVADMKIKLEAVRSFLFRVAYALDRDDP
                     EALNLCNMLKVFAANEVIHICRQGLELHGGYGSMMEMGYEKLMRDALMFPHMDGSEDL
                     CAFRIIKKMFPDTAGTYAGGD"
BASE COUNT          548 a          573 c          522 g          506 t
ORIGIN      
        1 atgtgcccaa ggaacacgcc aaattcgccc gcgcccaggt ggttggtaat ctggttattg
       61 tttcgggctg tcaagcgctc gaccataaca cggttaaagt ggaaaccatg gatttcaccg
      121 agcaaagtga aatcgtgctc gagaaaatca aaattggcat ggaggagacc ggcggttcac
      181 tggcaagtgt ggtcaaaaca aatgtgtttc ttaaagattt aaacgaactg gcgcgctacc
      241 gtgacgtcga gcgagaattt tatcagcgtc atgtgccgga tattggcaat aacttaccgg
      301 ccagcaccac cattatcgtt gacgaattgc cgcgcccaga atttctggtc gaagttgaag
      361 cgattggcgt cgccgatgat aaagacctaa attggcaggt aacatttact ccgggtgata
      421 aggatgcatc tgcgacagtg tccgctggca acctggtgtt cctgtccggc tgtgacagcg
      481 cggataccgg caccgtcgag caacagatta acactgccct cgataaagtc cggactaatc
      541 tcgaagtcgc gggtagttca atggacaaaa tcgtcaagac cttaatgatg ctgcggcata
      601 tcgaagatta tccaaaaatg cgtaaagtgg agattgaata ttacgaacgg cacgcactcc
      661 atctggttgc caatccaccg gtcagcacgt tcgttcaact cccggaaatc acccggcccg
      721 acaccttatt tcagatcgac gtcaccgcca cacgttagct tgagctaatc cccaccggca
      781 taggtgccgg cggtatccgg gaacattttt tttataatgc ggaaggcaca gagatcttcg
      841 ctgccgtcca tatgcgggaa catcagcgca tcacgcatca gcttttcata acccatttcc
      901 atcatcgagc catagccgcc atggagctcg agcccttggc ggcagatgtg aataacttca
      961 ttggctgcga acactttcag catgttgcac aaattgaggg cttccggatc atcccggtca
     1021 agcgcatagg ccacgcgaaa cagaaacgac cgcacggctt ccagcttgat cttcatatcg
     1081 gcgaccctgg cggcgaccgc ctgatgcttg attaatattt tgccaccctg gacgtgctcc
     1141 tgaacccatg ctgccgtggt atcaaaagcg tcctggccaa caccgatatt cttggctgcc
     1201 tgtaagagtt tgccgagccg gtagaaaaca atttcagctt ttggcaagcc atcgttcttg
     1261 accaacaaat gatcctcggg caggcgcaca tcttcgagca ctatttcacc attgttcatc
     1321 agccgggcgc cgatggtctc gttgcagcgg gcgatgctga cgccgggcgt atcccggggg
     1381 acgacaaaac ttgacgtgcc ttcgaggaca ccgacatcgg aattggtgtt ggcgtaaaca
     1441 ataaataaat tgccgtcata gccattggtg atgaagtgct taactccgtt caacacccat
     1501 tcgccattat caaaaaccgc tttagtgtcc atattggatt caggtacatt gtaaggtaac
     1561 cagcgatcag atgagccgcg aggttccgat accgcatggc ccattaaaaa agttggatcg
     1621 gcgacgattt ccggaaacca ttcctcttga atacgttctg acgcataggt gcgtattaac
     1681 accgacaatt tccaggtttg aattaatttg tctgccaaac cgcagtcacc ccgtgccaat
     1741 tccatggcga ccagcgtgca caccagcgat tcaatagtgg gatcaacttc aacaccgcca
     1801 aatttttccg gcacgccaat gcagcgaatg ccgagtttgt cgacggcttc aaaaattttc
     1861 cgcggcaccc ggtcctcagg cgcggcgttc cattcccgat ccggatcttc cttgataaag
     1921 ggcttgataa cgtcgttgac aaaatcatgc acgctctgcc aaagaatctg atgttcctcg
     1981 gcaagacctt caatcgccat atccattatt aaatcctccc catgcaacca gcgagtagaa
     2041 ggcagctgag tagaattccg ctgtctttca ctgcgcttat ggatgctagg cggacagggt
     2101 gggcctatca ttgatcaaaa tcaataacag caatggtttc tatggcgcg
//
LOCUS       DASCNL010000603         1208 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001244226, whole genome shotgun sequence.
ACCESSION   DASCNL010000603 DASCNL010000000
VERSION     DASCNL010000603.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001244226"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            147..920
                     /locus_tag="QF359_08055"
     CDS             147..920
                     /locus_tag="QF359_08055"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HJO86898.1"
                     /translation="MLLAIDSGNTNIVFAVFADDGEVKGEWRAASDVNRTADEFGVWL
                     GQLMERDGLTREDITAAIIATVVPVSRIHLENLCEHYFDCVPLVVGDSDVDLGLEILI
                     DNPKEVGADRLCNAVSAYENYNGPVTIIDFGTATSFDVVDSDGNYRGGIISPGINLSL
                     EALHMGAAQLPRVSIERPEKVVGTGTISAMQSGIFWGYVSMIEGMTARIKQEVGSEMK
                     IIATGGLAAMFADATDAIDHWEQDLTLRGLLAIYRRNQP"
     gene            920..>1208
                     /locus_tag="QF359_08060"
     CDS             920..>1208
                     /locus_tag="QF359_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJO86899.1"
                     /translation="MAKKQDPELLFVPLGGAEEIGMNFNLYGYGAPDDHDWIIIDLGI
                     TFGDDSTPSIEVILPDPTFIEERLDKLAGIILTHGHEDHLGAVPYLWDRLGC"
BASE COUNT          279 a          270 c          343 g          316 t
ORIGIN      
        1 ttgtcgaaag tggttctgaa aaatacattg gaccattttg cgattttgat gagcatggcg
       61 cgttagtcat cgaaaccact aacgggcctc gccgaattac cgctggcgac gtatacttta
      121 gcgatacaga aggtggagaa tcttaagtgc tgctggcaat agattcaggt aacactaata
      181 ttgtttttgc cgtcttcgct gatgatggtg aagttaaagg agagtggcgg gcggcatccg
      241 atgttaaccg gacggcagac gagtttggcg tgtggctcgg tcagttgatg gagcgtgatg
      301 gcttaacccg ggaggatatt accgctgcga ttatcgccac tgtggtacct gttagccgga
      361 ttcatctgga aaatctctgc gagcactatt ttgattgcgt gcctttggtg gtcggtgatt
      421 cagacgtcga tcttgggctg gagatattaa tcgataatcc taaagaggtc ggagccgacc
      481 ggctgtgcaa tgccgtgtca gcctatgaga actataatgg accggtgacg attatcgatt
      541 tcggtacggc aacgtccttt gatgttgtcg actccgatgg caactaccgg ggaggcatta
      601 tctcgccggg tattaatctg tcactggaag cgctgcatat gggagcagct cagttgcccc
      661 gcgtctccat cgagcgacct gaaaaagtcg tcggtacggg caccatctcg gccatgcagt
      721 ccggtatttt ctggggatat gtcagcatga tcgaaggaat gacggcgcgt atcaaacagg
      781 aagtcggtag cgagatgaag attatcgcga ccggcggatt agccgcgatg tttgctgatg
      841 ctactgatgc gattgaccat tgggagcagg atctaacctt gcgtggtctg ctggctattt
      901 accgacgtaa ccaaccttga tggcgaaaaa acaagaccca gaacttctct ttgtgccgct
      961 tggcggtgct gaagaaattg gcatgaattt taatctctat ggttacggcg cgccggacga
     1021 ccatgattgg atcatcattg atctcggcat tacctttggc gacgattcaa cgccgagcat
     1081 tgaagttatc ctaccggatc caacttttat tgaagaacgc ctggacaaac ttgccggcat
     1141 tatccttacc cacggtcatg aagatcattt aggtgcggtg ccgtatctgt gggaccggct
     1201 gggctgtc
//
LOCUS       DASCNL010000604         1157 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001246144, whole genome shotgun sequence.
ACCESSION   DASCNL010000604 DASCNL010000000
VERSION     DASCNL010000604.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1157)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1157)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001246144"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(31..>1157)
                     /locus_tag="QF359_08065"
     CDS             complement(31..>1157)
                     /locus_tag="QF359_08065"
                     /inference="COORDINATES: protein motif:HMM:TIGR00379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HJO86900.1"
                     /translation="DSNSALARLLGVPIILVVDTYGMTRGVAPLLQGYQSFESDIQIA
                     GVILNKVGGARHERKMRAAIEHYTDLKVVGAIGRHPELKIVERHLGLVSVNEMPAADS
                     NIARTARIIEAEVDIDAVQVLAAPAQPKINPEAMVPSIVSSPKVRITIARDVAFGFYY
                     QDDLEALSQAGAELVPFDALHDRHLPEVDGLFIGGGFPEVHMQALSENTSLKTDIREA
                     IEGGMPAYAECGGLLYLARSLSWQGDTYDMVGVIPGDGVMYDRPIGRGYVRLSETGNG
                     IWPHLGETENILEDIPAHEFHYGSLEDLSEDLDYAYKVIRGHGIDGEHDGLIINNLTA
                     CFAHQRNLTSNCWAESFVAFVDQQKTTSQTGPVDPASLTA"
BASE COUNT          307 a          314 c          261 g          275 t
ORIGIN      
        1 aatcaaatta atccgataaa gcagatgctc ctaggcggtt agagacgccg gatcaaccgg
       61 tcccgtctgg ctggtcgttt tttgctggtc gacaaaagct acgaaacttt cagcccaaca
      121 gttggacgta agattgcgct ggtgggcaaa acaagcggtg agattattga ttatcaagcc
      181 atcatgctca ccatcaatac catgaccgcg tatcacctta taggcatagt ctaagtcctc
      241 cgataaatct tctaacgagc cataatgaaa ttcatgggcc gggatatctt caaggatgtt
      301 ttcagtctca cccaaatgag gccaaatccc gtttccggtt tcagagagcc gtacgtagcc
      361 acgcccaatt ggccggtcgt acatcacgcc gtcaccagga ataacgccga ccatatcgta
      421 agtatcacct tgccagctga ggctgcgggc tagatagagc agaccgccgc attccgcata
      481 ggctggcatt ccgccctcaa tggcttcacg gatgtcagtt ttcaaagatg tattttccga
      541 taatgcctgc atatgaactt ctggaaaacc accaccgata aacaacccat caacctcggg
      601 caaatgacga tcatgcaaag catcgaaggg caccagttct gcgccggctt gacttaaagc
      661 ttcgagatca tcttgatagt aaaacccaaa agcgacatca cgagcgatgg taatgcgaac
      721 cttcggagag ctaacgatgc ttggcaccat ggcttcagga tttatcttcg gttgggccgg
      781 cgctgccaat acttgcaccg catcgatatc aacttcggct tcaatgatac gtgccgtccg
      841 agcgatatta gaatccgcgg ccggcatttc atttactgag accagtccaa gatgacgttc
      901 aacaattttc aattccgggt gccgcccaat cgcaccaaca actttcagat cggtataatg
      961 ctctatcgct gcacgcattt tccgctcgtg gcgggcccca cctactttgt ttaaaatgac
     1021 tccagcaatc tggatgtcgc tttcaaaaga ttgatagcct tgcagtagtg gcgctacgcc
     1081 ccgtgtcatg ccataagtat cgaccaccaa aataatcggc acaccgagca acctggcaag
     1141 tgctgaatta ctgtcgg
//
LOCUS       DASCNL010000605         2512 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001246214, whole genome shotgun sequence.
ACCESSION   DASCNL010000605 DASCNL010000000
VERSION     DASCNL010000605.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001246214"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..137)
                     /locus_tag="QF359_08070"
     CDS             complement(<1..137)
                     /locus_tag="QF359_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin, Grx4 family"
                     /protein_id="HJO86901.1"
                     /translation="MNDSPVFERIQSEIDDSPVTLFMKGSPMFPQCGFSAAVVQSLTM
                     LG"
     gene            complement(168..407)
                     /locus_tag="QF359_08075"
     CDS             complement(168..407)
                     /locus_tag="QF359_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HJO86902.1"
                     /translation="MAMDVAEIERLIKEGLPDAEVHIEDLRGDGDHYAAYVASVSFAG
                     LSRVKQHQMVYATLQGKMGTDLHALALQTSVPEST"
     gene            complement(539..>2512)
                     /gene="purL"
                     /locus_tag="QF359_08080"
     CDS             complement(539..>2512)
                     /gene="purL"
                     /locus_tag="QF359_08080"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HJO86903.1"
                     /translation="AGIVDIGDGQAAVFKMESHNHPSYIEPYQGAATGVGGILRDVFT
                     MGARPIANMNALCFGSPDHPKTHHLVSGVVAGIGGYGNCIGVPTVGGETNFHSSYDGN
                     ILVNAMTVGLAQTDNIFYSAATGAGNPVVYVGSKTGRDGIHGATMASTEFNADSEEKR
                     PTVQVGDPFTEKLLVEACLELMATDVIVAIQDMGAAGLTSSSFEMASKGGVGVEMDLD
                     QVPAREVGMTAYEFLLSESQERMLMVLEPGKEYVAQAIMEKWELDFAVVGHLTDTGRM
                     VIKMNGEVEADLPIDPLALASPEYDRPWVKTEPQAEVLASDVAAPESLLGALKQIVGS
                     SDMCSKRWIWEQYDHLVMGDTVQRPGGDAAVVRVQNTQKGLAITTDCTPRYCLADPVE
                     GGKQAVAEAWRNLTAVGAKPLAITDNMNFGNPEKPEIMGQFVGAIEGIRKACTALDFP
                     VVSGNVSLYNETAGQAIQPTPTIGAIGIMADYQKSIGVAFAGEGEAILLLGDTKGHLG
                     QSIYLREIEAREEGAPPPVDLKAERLTGDCVRSLIDAGDLTACHDLSDGGLLMALAEM
                     AMASGIGVTITGEAADLPMHAWAFGEDQGRYLVTTKDVEKVLMTCLGAQLSAEAIGET
                     GGEHLSFNGETISVAELKDAHESWLPDYMAAVE"
BASE COUNT          594 a          725 c          596 g          597 t
ORIGIN      
        1 cccaacatcg tcagtgactg gacgacggcg gccgaaaaac cgcattgcgg gaacattggc
       61 gagcctttca taaacagcgt taccgggctg tcatcgattt cggattgaat ccgttcaaat
      121 actggactgt cgttcatcat gtttccttcg atctgaattt gtgatgttta agtagattcc
      181 ggaacggagg tttgcaaggc cagagcatga agatcagtgc ccatttttcc ctgcaaggtt
      241 gcatagacca tttgatgttg tttgacgcgg gatagacctg caaacgatac ggaggcaacg
      301 taagccgcat aatggtcacc gtcaccgcgc aaatcttcaa tatgaacctc ggcgtccggc
      361 aggccttctt ttatgagccg ttcaatttct gcaacatcca ttgccatcag tattatttcc
      421 ttcagttact tactttatgt ggttatttta gccgatgctg acaacaattt cgcccctaaa
      481 ttaattaggg atatagaacg tttattccaa aaatcaagga tatccagcta ttcctgggtt
      541 attccaccgc cgccatataa tccggcagcc agctctcatg ggcgtcttta agttcggcga
      601 cagagatggt ttcgccgtta aaactgaggt gttcaccacc tgtttcgcca attgcttctg
      661 ccgacagctg cgcgcctaga caggtcatca gcactttttc aacatctttg gtggtcacta
      721 gataacgccc ctggtcctca ccaaaggccc aggcatgcat aggcagatcg gccgcttcac
      781 ccgtaattgt cacgccaata ccggacgcca tcgccatttc agcgagcgcc atcaacagac
      841 cgccatccga tagatcatga caggcggtga gatcaccagc atcaatgagg ctgcgcacac
      901 aatcgccagt taaacgttca gctttaagat caaccggtgg cggcgccccc tcttctcgag
      961 cctcaatttc gcgcaaataa atactttgtc cgagatggcc tttggtatcg ccgagcaata
     1021 aaattgcctc gccctcaccg gcaaatgcaa caccaatgct tttctggtaa tccgccatga
     1081 tgccaatggc accgatggtg ggtgtcggct ggatcgcctg gcccgcagtc tcgttgtaaa
     1141 gtgagacatt accggaaacg accgggaaat cgagcgccgt acaagccttc cggatgcctt
     1201 caatagcgcc gacaaactgg cccatgatct ctggtttttc cggattgccg aaattcatat
     1261 tatcagtgat agcaagcggc ttagcgccaa ctgcggttaa gtttcgccac gcctccgcca
     1321 ccgcctgttt accgccttca accgggtccg ctagacaata gcggggggtg cagtcggtgg
     1381 taatcgccag gcctttttga gtattctgca cccggacgac cgccgcatcg ccgcccggac
     1441 gctgtaccgt gtcacccatc accagatgat catattgttc ccaaatccag cgcttggaac
     1501 acatatccga tgagccgaca atttgtttca gcgcacctaa tagactttca ggcgcagcaa
     1561 catcacttgc cagcacttct gcctgcggct cggtcttaac ccaggggcgg tcatattccg
     1621 gcgacgccaa agccagcgga tcgatcggca gatcagcctc aacctcgccg ttcattttga
     1681 tcaccatccg gccagtatcg gtcagatggc caacgacggc aaaatcgagc tcccattttt
     1741 ccataatcgc ctgggcgaca tattctttgc cgggctcgag aaccatcagc atccgttcct
     1801 gactttccga cagcagaaat tcataggccg tcatgcctac ttcacgggcc ggcacttgat
     1861 cgaggtccat ctcgacgccg acgccacctt ttgacgccat ttcaaaggat gaggaggtca
     1921 gaccagccgc tcccatatcc tggatcgcca caatcacatc tgtcgccatt aattcgagac
     1981 aagcttcgac cagcagtttt tcggtaaagg gatcaccgac ttgaacggtt ggccgctttt
     2041 cttccgaatc cgcattaaac tcggtcgagg ccatggtcgc gccgtgaatg ccgtcacggc
     2101 ctgttttgga accgacatag accaccggat tgccggctcc ggtcgcggcg gaatagaaaa
     2161 tattatcggt ctgggccaag cccaccgtca tcgcattgac cagaatattg ccatcatagc
     2221 ttgaatggaa attggtttca ccgccgacag tcggtacgcc aatgcaatta ccatagccgc
     2281 caataccggc gacaacaccg gaaactaaat gatgggtctt gggatgatct gggctaccga
     2341 aacacagcgc gttcatattg gcgattggtc tggcccccat cgtgaagacg tcacgcaaaa
     2401 taccgccaac accggtggcg gctccttgat agggctcgat atagcttgga tgattgtggc
     2461 tttccatttt gaaaaccgcc gcctggccat caccaatatc aacgataccg gc
//
LOCUS       DASCNL010000606         1687 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001249199, whole genome shotgun sequence.
ACCESSION   DASCNL010000606 DASCNL010000000
VERSION     DASCNL010000606.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001249199"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..855)
                     /locus_tag="QF359_08085"
     CDS             complement(<1..855)
                     /locus_tag="QF359_08085"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019084977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HJO86904.1"
                     /translation="MSNVVIVESPAKAKTINKYLGSDYTVLASYGHIRDLPSKNGSVR
                     PDDNFEMDWEVDSKSQKQIREITAAMKGADHLYLATDPDREGEAISWHVQEVLNEKKL
                     LDGVEVQRVVFNEITKSAILNAFTNPRELDKELVDAYLARRALDYLVGFTLSPVLWRK
                     LPGSRSAGRVQSVALRLITERETEIEAFNPVEYWSIKVQFAKSDNQTFTANLTHLDGK
                     KLDKLALKNGQDAQNAVAQIEAANFAVSKVEKKQSRRNPPSPFTTSTLQQEAARKLHF
                     GAQKTMRTA"
     gene            complement(1101..1445)
                     /locus_tag="QF359_08090"
                     /pseudo
     CDS             complement(1101..1445)
                     /locus_tag="QF359_08090"
                     /inference="COORDINATES: protein motif:HMM:NF014533.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
     gene            complement(1483..>1687)
                     /locus_tag="QF359_08095"
     CDS             complement(1483..>1687)
                     /locus_tag="QF359_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86905.1"
                     /translation="YNLSSNISICCIKKPLALSARATLHSMDIGLQRRSPAPLVKLAI
                     LFPPAWRAVLTAQLTKVRLTLAR"
BASE COUNT          400 a          384 c          427 g          476 t
ORIGIN      
        1 cgctgtccgc atggtttttt gggcaccgaa atgcaattta cgggcagctt cctgttgtaa
       61 ggttgaggtc gtgaacggcg acggtggatt gcgccgtgac tgtttttttt caactttcga
      121 gacggcgaaa ttggctgctt cgatttgagc tacagcattt tgagcgtctt gtccgttttt
      181 gagtgcgagc ttatcaagct ttttaccatc taaatgagtt aaattggcgg taaaggtctg
      241 gttgtcggat tttgcaaatt gaactttaat gctccaatat tcaaccggat tgaatgcttc
      301 gatttcagtt tcgcgttcgg tgattaggcg cagcgccacc gattggacac gtccggcaga
      361 acggctgccc ggtaatttac gccatagcac tggtgaaaga gtgaagccta ctaaataatc
      421 caaagcgcgg cgggcgagat aagcgtcaac cagttctttg tccaattcac gcggattagt
      481 aaaggcattc aaaattgctg atttggtaat ctcgttgaaa acaacacgct gaacttcgac
      541 accgtccagc agttttttct cattcaagac ttcctggaca tgccaggaaa tggcttcacc
      601 ctcccggtcc ggatcagttg caaggtataa atgatccgca cctttcatgg cggcggtaat
      661 ttctctgatt tgtttttggg acttgctgtc gacttcccaa tccatctcga aattgtcatc
      721 cgggcgcacc gagccgttct tggagggtaa atcccggata tggccatagc tcgccagaac
      781 cgtatagtcc gagcctaaat acttgttaat ggttttcgcc ttagcgggcg attcgactat
      841 aacgacgttc gacattttgc tttttataga tcgcctataa ttgaaacctg gttgccggga
      901 tgtcgctcta aacggcctgc taatttgatt tccaacaaga ttgtcgacac cactgcaggg
      961 gacatgtggc atcgtcgaat gatttcgtca acactaactg gcgaagtatt taaaataatt
     1021 tttacctcgc gtcgggctga tttgatttca aaggggtccg gctagggttt attttgttgt
     1081 ttaatttcaa atggttctga ctaggataga ggtctcataa attgctcatt taaaatttga
     1141 ataatttctt cggcatcttc tgccaaatgt gcgccctggc gaattaattc atttgtccct
     1201 ttagttcgag ggtccagggg cgaaccaggc acgacgaaga cttcacggtt ttgtgcgatc
     1261 gccaggcgag cagtgatcaa tgaacccgat cttttaactg cttcggtgat gacgatggtg
     1321 cgggtggcac cggaaataat acgatcgcgg ctcggaaaat ggtgcgcttg tgtcaccgtg
     1381 ccgaccgaca ttttggaaat gacgacaccg gtttcaacga tgcgctcata aagtttttgg
     1441 ttttccttgg gataaccacg tcagcgccgc tggcgcggac ggctaccgtg ctagtgttaa
     1501 gcgcaccttc gtaagctgag cggtcaatac cgcgcgccat gcaggaggaa acaagatagc
     1561 caacttcacc aaaggtgccg gcgaacgacg ctgcaatccg atgtccattg agtgaagcgt
     1621 tgcgcgtgcc gacaatgcca acggcttttt tatgcagcag atggagatgt tcgatgacaa
     1681 attataa
//
LOCUS       DASCNL010000607         3804 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001251811, whole genome shotgun sequence.
ACCESSION   DASCNL010000607 DASCNL010000000
VERSION     DASCNL010000607.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3804)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3804)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3804
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001251811"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="QF359_08100"
     CDS             <1..962
                     /locus_tag="QF359_08100"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJO86906.1"
                     /translation="TIALHKTSIEQRVVIRRNEARARRFVENGVEPHQLKFGGKLDFS
                     TPWALKRQINDFKPDIVLSWMNRATGMCPADGNFVHIGRLGGYYNIKYYRNCDHLIAN
                     TEDIAEFLINNGWAQENVHYLPNFVGAKRAVPVDRQTFYTPQNTPLILAMGRLHENKA
                     FDLLLRAVARVPNAYLWLAGEGSLRKELEYQAEVLGIKPRVRFLGWHDDPEALFAAAD
                     IFVCPSRHEPLGNVVIEAWAQGVPVIAADSIGPGTLITHGENGVLFSIDDEKMLAASI
                     KYLIEEPDRAEYLAVQARAEYEANFTESIIIEKYLKFFERMNS"
     gene            962..2731
                     /gene="asnB"
                     /locus_tag="QF359_08105"
     CDS             962..2731
                     /gene="asnB"
                     /locus_tag="QF359_08105"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HJO86907.1"
                     /translation="MCGLAGILLHDGTPDGAAIDALAAALAHRGPDGSGEFSYQDMKV
                     VHTRLSIIDLETGDQPIQDKRGAVIVANGEIYNYLELRQSLGEKNFQTKSDCEPPLLL
                     YELNGTAFTQALRGMYGIAIADPHNHHIQLARDLFGIKPLYYTEFDGGIAFASETGAL
                     LDAGLAPRRLNPGKRQELLQLQFTTGEETIFQGIKRVKPGQTLTHDGRQVTHSLHHRA
                     LPKAGPESWSEAEALERLEEALMDSVMVHQRADVPYGMFLSGGVDSSVVLACMRDLNE
                     QPVEAFTAGFSGTSVADEREHAKTVAAAAGANFHEIEFSENNFWSLLPKIAAAMDDPA
                     ADYAILPTYKLGQLVKDSGLKVVLSGEGGDELFAGYGRYRKQMRPWYLGGRNMRSKGV
                     FYGLNLLRDQSMDWRDNFDRIWARESNSNRTKLQIAQAVDCADWLPHDLLIKLDRCLM
                     AHGVEGRTPLLDKKVADVAMRLPDNFKVRGRVGKYLLRRWLDQKLPEANAFDDKKGFT
                     VPVAEWIGRRGSDLGKLVTAQESINEICDLTGVEKLFASLEGSHPKRSGQAAWVLLFY
                     ALWHRRHIEGIVPEGDVFEVLGG"
     gene            2780..3052
                     /locus_tag="QF359_08110"
     CDS             2780..3052
                     /locus_tag="QF359_08110"
                     /inference="COORDINATES: protein motif:HMM:NF012798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HJO86908.1"
                     /translation="MLPSLGSTQKVCCLAHGQLLAEGLIGLDSTLFGTHSLRRTKATL
                     IYRRTGNLRAVQLLLGHTKIDSTVRYLGIENVQIKVPLGYLKWRAP"
     gene            complement(3311..>3804)
                     /locus_tag="QF359_08115"
     CDS             complement(3311..>3804)
                     /locus_tag="QF359_08115"
                     /inference="COORDINATES: protein motif:HMM:NF013847.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HJO86909.1"
                     /translation="RQLGEDPDELPATYAKLISDSVKGRPNDMIICIHLCRGNAFSAG
                     FAGGGYEQVADIMFNQTEVDAFFLEYDDERSGGFEPLRFVPNDKKIVLGLVSSKKGAL
                     EEVDNLKARVEKAMDYISPDQLCLSPQCGFSSSTTGPNKIGADEQADKLRLVVEAANA
                     IWA"
BASE COUNT          942 a          874 c         1002 g          986 t
ORIGIN      
        1 taaccattgc acttcataaa accagcattg aacagcgcgt cgtgatccgc cgtaatgaag
       61 cgcgcgccag gcgttttgtc gaaaatggtg ttgaacctca tcaattgaaa tttggcggca
      121 aactggattt ttcaacgcca tgggcactaa agcggcaaat caatgacttc aaaccagata
      181 tcgttttaag ctggatgaac cgtgccaccg ggatgtgtcc agccgatggt aattttgtcc
      241 atatcggcag gcttggagga tattataata ttaaatatta ccgcaactgt gatcacctga
      301 ttgctaatac tgaagatatt gccgagtttt taattaacaa tggctgggct caggaaaacg
      361 ttcactacct gccgaatttt gttggggcca aacgtgcggt gccggttgac cggcagactt
      421 tttatacgcc gcaaaacact ccgcttatat tagcgatggg ccgtttacac gaaaacaagg
      481 cttttgattt attattgcgg gcggttgccc gggtaccgaa cgcttatctc tggcttgctg
      541 gagaaggttc gttgcgtaaa gaattggagt atcaggcaga agttctgggt atcaaaccac
      601 gcgtgcgttt cttgggctgg cacgatgatc cggaagctct ctttgccgct gccgatatct
      661 ttgtttgtcc gtcccgccac gaacccttag gcaatgttgt aattgaggcc tgggctcaag
      721 gtgtaccagt catcgctgct gatagtatag ggcccggtac tctgattacg cacggtgaga
      781 atggcgtatt gttctcaatc gatgacgaaa aaatgttggc ggcttcgatt aagtatttaa
      841 ttgaagagcc ggatcgagcc gaatatttgg ctgttcaggc gagagctgaa tatgaagcca
      901 atttcaccga aagtatcatt atcgaaaaat atcttaaatt ctttgagcgg atgaactcct
      961 aatgtgtggt ctagccggta tcttgctcca tgacgggacg ccagatggag cggcgatcga
     1021 tgctcttgcg gccgcattgg cgcaccgggg cccggatggc agtggcgagt tttcttatca
     1081 ggatatgaag gtagttcaca cgcggctgtc catcatagat ctggagactg gtgaccaacc
     1141 gattcaggat aagcgcggtg cggttatcgt cgccaatggc gagatttaca attaccttga
     1201 actacgccaa tctcttggcg agaaaaactt ccaaaccaaa tcggattgtg agccgccgtt
     1261 attgctctat gagctcaacg gcacggcctt cacgcaagct ttgcgaggca tgtacggcat
     1321 cgccattgct gatccgcaca accatcatat ccagttggcg cgtgatctct ttggcattaa
     1381 gccgctttac tataccgaat ttgatggcgg cattgccttt gcttctgaga cgggcgcgct
     1441 gctggatgcc gggctggcac cgcgccggtt aaatcccggt aagcgccagg aattgctgca
     1501 attgcaattt accaccggcg aggaaacaat ttttcaaggt attaaacgag taaagcccgg
     1561 ccaaacactc acccatgatg gcagacaagt gacccattca ttgcatcacc gggctttgcc
     1621 aaaagccggg ccggaaagtt ggagtgaagc agaagcgctc gagaggttgg aagaagcgtt
     1681 gatggatagc gtgatggttc accagcgagc ggatgtgcct tacgggatgt ttttgtcagg
     1741 tggtgtcgat tcctctgttg tgctcgcctg tatgagagat ttgaacgagc agccggttga
     1801 ggcttttacc gccggttttt ccggaacatc ggttgccgat gagcgcgaac atgccaaaac
     1861 tgttgccgct gctgccgggg ccaattttca cgagattgag ttttctgaaa ataatttttg
     1921 gtcgttgttg ccgaagattg ctgccgcaat ggacgatccg gcggcggatt acgcgatatt
     1981 gccgacttat aagcttgggc aattggtcaa ggattccggt cttaaagtcg tgcttagcgg
     2041 tgagggtggg gacgagctgt ttgccggtta tggccgctac cgcaaacaaa tgcgcccatg
     2101 gtatctcggt ggccgcaata tgcgttcgaa aggtgtcttt tatggtctca atttattgcg
     2161 ggatcagagc atggattggc gtgataactt cgaccggata tgggctcgtg aaagcaactc
     2221 aaatcgcacc aagctccaga tcgcccaggc tgttgattgt gccgactggc tgccccatga
     2281 cttgttgatt aagctggatc gttgtctgat ggctcatggc gttgaaggac ggacgccgtt
     2341 actagataaa aaagtcgccg atgtggcgat gcgattacca gacaatttta aagtccgggg
     2401 acgggtgggt aaatatctac tgcgacggtg gcttgatcaa aaactgccag aagcaaatgc
     2461 ctttgatgat aagaagggct tcaccgtacc ggttgcggaa tggatcggtc gccggggaag
     2521 cgacctcggc aaacttgtca cggcgcagga aagcatcaac gagatatgtg acctgacggg
     2581 cgtagaaaag ctgtttgcat cgctcgaagg atcacaccca aaaagaagcg ggcaggcagc
     2641 ctgggtgctg ttgttttatg ccctttggca ccgccgtcat attgaaggca ttgtacccga
     2701 aggagatgtc ttcgaggtgt tgggcggata attaagggga tagcttactt aataattgtt
     2761 tttctaatct ttctagtccg tgctgccgag tttagggtcg acccaaaaag tttgttgttt
     2821 agcgcatggg caattattag cagaaggctt aataggattg gattcaactt tatttggcac
     2881 acattcctta agacgaacca aagcgacgtt gatttatcga agaacgggga acttaagagc
     2941 cgttcaactt ttactcggac acaccaaaat cgacagtact gtcaggtacc ttgggattga
     3001 gaacgtccaa atcaaggttc cactcggata cttgaagtgg agggcacctt gaactggtgg
     3061 tgacaccgtg acacttagaa agtacagcca aacgtcctta atgcaccccg taaggggttt
     3121 aatgatattg aaattccccc cgccttttaa aaagaggcca ctaatgtttt gaactacagg
     3181 cttaattaag atcagttatc actaaatatt ctgtctcatt cataactcct atctcgttac
     3241 gatgagccag aaattctctc tattaaatac tacaatttag tgccataggc gctgacgtgg
     3301 gacaccggcc ttaggcccag atcgcgttag cagcttcgac gacgagccgc agtttatctg
     3361 cttgttcatc ggcaccgatt ttgttgggac ctgtggtgct gctggaaaaa ccgcattgcg
     3421 gtgacaggca aagctgatct ggcgaaatat agtccatcgc tttttcgacc cgcgctttca
     3481 aattatcgac ttcctccaag gcgccttttt tcgaagaaac tagaccgagc acaattttct
     3541 tgtcattagg cacaaatcgc agcggctcaa acccgccaga gcgttcgtcg tcatattcga
     3601 ggaagaatgc atcaacctct gtttgattaa acatgatatc agcgacctgc tcatagccgc
     3661 cgccggcaaa gcccgcacta aaagcattgc ctcggcaaag atggatacaa attatcatat
     3721 cattgggccg gcctttgact gaatcactga ttagtttggc ataggtggct ggcagttcgt
     3781 ccgggtcttc acctaactgg cgca
//
LOCUS       DASCNL010000608         1026 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001254395, whole genome shotgun sequence.
ACCESSION   DASCNL010000608 DASCNL010000000
VERSION     DASCNL010000608.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001254395"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1026)
                     /locus_tag="QF359_08120"
     CDS             complement(<1..>1026)
                     /locus_tag="QF359_08120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJO86910.1"
                     /translation="TAAADQDCLFPLSLGAEGSCRIGGNLSTNAGGIGVLRYGNTRDL
                     VLGLEVVLPSGEIWDGLSALRKDNTGYDLKQLFIGAEGTLGIITQAVLKLFPAPKTMM
                     TVMAALPELAAILKLFDATRKLYGDRLTAFELISRIGVDLGLTHIPGVVDPFEARYPY
                     YALIELSSPRANDDLRTEIETVLEKAFENGIVMDAVFAESVAQRQELWKIREEIPAAQ
                     TCEGGSIKHDISVPVSQTTAFIDEASKQAVEAMPGVRPCPFGHIGDGNIHFNLTKPEA
                     MAKEDFMGQAEEFHRIVYDLVVEMKGSISAEHGIGTFKREELAHYAATTKINLMQRIK
                     QALDPDN"
BASE COUNT          240 a          284 c          242 g          260 t
ORIGIN      
        1 tattgtccgg gtcgagggcc tgtttgatcc tctgcatcaa attgattttt gtagttgccg
       61 cataatgtgc caattcttcc cgcttaaagg tgccaatacc atgttcagcg ctgatgctgc
      121 ccttcatctc aaccaccaga tcatagacta tgcggtggaa ttcttctgcc tgccccatga
      181 agtcttcttt ggccattgcc tcaggtttgg tcagattaaa gtgaatattg ccatcgccga
      241 tgtgaccgaa cgggcagggt ctaacacctg gcatcgcctc aacagcctgt tttgaagctt
      301 catctataaa ggcagtagtt tgcgagaccg gcaccgaaat atcgtgtttg atgctgccgc
      361 cttcgcaggt ttgagctgcc ggtatttcct cccggatttt ccatagctcc tgcctttggg
      421 caacgctttc agcaaagacc gcatccatta caatgccgtt ttcgaaggct ttttccagca
      481 cggtttcaat ttccgtccgc agatcatcat tggcacgagg tgacgacaac tcgatcaagg
      541 cgtagtaagg gtacctagct tcaaagggat cgacgacgcc gggaatatgg gtcaggccca
      601 aatccacccc gatccgcgag atcagctcaa acgccgtcaa ccggtcaccg taaagtttcc
      661 gtgttgcatc aaataatttc aggatcgcag ctaactcagg tagcgccgcc atcacagtca
      721 tcattgtttt tggtgctgga aatagtttca gtacggcctg cgtgataatg ccgagggtgc
      781 cttccgcgcc aataaagagt tgcttaagat catagccggt attgtcttta cggagcgcgc
      841 tgaggccgtc ccaaatctcg ccactgggta aaacgacttc caaaccgagc accagatcgc
      901 gcgtattgcc gtaacgcaaa accccaattc caccagcatt ggtcgataaa ttgccgccga
      961 tccggcaact gccttcagca cccagactca gtggaaacag acaatcttga tcagctgcgg
     1021 cagtct
//
LOCUS       DASCNL010000609         1127 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001255222, whole genome shotgun sequence.
ACCESSION   DASCNL010000609 DASCNL010000000
VERSION     DASCNL010000609.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1127)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1127)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001255222"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="QF359_08125"
     CDS             complement(<1..221)
                     /locus_tag="QF359_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HJO86911.1"
                     /translation="MPTTWKPPSLIENPVLRYGMVVLAIIYFFWSVGTLEIDWERTLK
                     GLPRAGDMISRMFPPDFDRWELLVRGVVE"
     gene            complement(224..1084)
                     /gene="phnC"
                     /locus_tag="QF359_08130"
     CDS             complement(224..1084)
                     /gene="phnC"
                     /locus_tag="QF359_08130"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008034125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HJO86912.1"
                     /translation="MVPLRLETTVKKVMLEVKSLAKQYDNGFHALHGVDLLVTEPQVV
                     AIIGPSGAGKSTFIRCINRLVEPTTGSINLNGEEITTLDRTGLRRARCRIGMIFQEYN
                     LVERLTVMENVLSGRLGYVSLLNAFRRNYPPNDVQSAYELLDHVGLSGRHNTRADNLS
                     GGQRQRVGISRALMQNPELLLVDEPTASLDPKTSRQIMRLICELAHERGTPVLVNIHD
                     VGLAQDFADRIVGLNEGRVIYDGLPGDLTSDVLTRIYGEDDWSKTIRRVDDEEENGEP
                     DVLDAGASAE"
BASE COUNT          296 a          301 c          254 g          276 t
ORIGIN      
        1 ctttcgacaa cgcctctgac caacagttcc cagcgatcga aatccggtgg aaacatacga
       61 ctgatcatgt cgccggcgcg tggcaaacct tttaaagttc gctcccaatc gatctccaac
      121 gtgccaacag accaaaagaa ataaattatt gcgagcacga ccatgccata gcgcagcacc
      181 ggattctcga ttaaactagg tggtttccaa gttgtcggca tgctcattct gccgaggctc
      241 cagcatccaa aacatcaggc tcgccgtttt cttcttcatc atcgacgcgc cggatggttt
      301 tgctccaatc atcttcgccg taaattcttg tcagcacatc cgacgttaga tcacccggca
      361 ggccgtcgta aatcacccgg ccttcgttta agccgacaat gcgatcagca aaatcctgtg
      421 ccaaaccaac atcgtgaata ttgaccaata caggtgtgcc gcgttcatgc gccaattcgc
      481 aaatgagccg cataatttga cgcgaggttt ttgggtcgag tgaagctgtc ggttcatcaa
      541 ccagcagcaa ttccggattt tgcattaagg cccgtgaaat accaacccgt tgccgctgac
      601 cacctgacag attgtcggcg cgtgtgttat ggcggcccga cagtccgacg tgatccaata
      661 gctcataggc agattgaaca tcatttggtg gatagtttcg gcgaaaagca tttaataaag
      721 aaacatagcc gagccgtccg gaaagaacat tttccatcac ggtcaatctt tcgaccagat
      781 tatattcctg gaagatcata ccgatgcgac agcgagcacg gcgtaaaccg gtgcggtcga
      841 gcgtggtaat ttcttcaccg ttgagattaa tcgatcctgt tgtcggttcg actagacggt
      901 taatacatcg gataaaggtc gatttaccag cccccgaggg tccaataatc gccaccactt
      961 gaggctccgt tacaagtaga tccacaccgt gcagggcatg aaatccattg tcatattgtt
     1021 tggcaaggct tttaacttcg agcatgactt tttttacagt agtttccaaa cgtaacggga
     1081 ccattctcca aacctggaaa atggcccccc caattcaaag gtaattg
//
LOCUS       DASCNL010000610         1132 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001260583, whole genome shotgun sequence.
ACCESSION   DASCNL010000610 DASCNL010000000
VERSION     DASCNL010000610.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001260583"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="QF359_08135"
     CDS             <1..236
                     /locus_tag="QF359_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO86913.1"
                     /translation="DEAMAGLSSSEVDDILKILITLNETTRITIIMIEHIMRAVMSFS
                     ERVICLDAGRIIANGTPDEVIKTPAVEKAYLGE"
     gene            229..957
                     /locus_tag="QF359_08140"
     CDS             229..957
                     /locus_tag="QF359_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO86914.1"
                     /translation="MSKLIIENISAGYGSVQVLHSVSLNVNPGETVVLLGTNGNGKST
                     LLKSVMGLVSPSVGAIRFEVDGQETNLVGKSPEEVVEMGIVMVPEARRLFPLLTVEEN
                     LTLGAYRDAARKKINENLDFCFTTFPRLKERRKQQAGSLSGGEQQMVAVARALMSEPK
                     ILLVDEPSVGLAPILVSQMIAKIKELKEIKNLTVLMAEQNFNQAIKIADRGYIIVHGQ
                     IEFEGKDAAALENNDMIKQYYLGV"
BASE COUNT          339 a          235 c          292 g          266 t
ORIGIN      
        1 cagatgaggc tatggcaggg ctttcaagct cggaggtgga tgatatcctt aaaatattaa
       61 tcaccctgaa tgaaacaaca agaattacga ttattatgat tgagcacatt atgcgtgctg
      121 ttatgagttt ttcggaaagg gtgatctgtc tagatgctgg aagaattatt gcaaatggca
      181 cacctgatga agttattaaa actccggctg tggaaaaggc atatttaggt gagtaaacta
      241 ataattgaaa atattagtgc cggatatggt tcggttcaag ttctacacag cgttagcctt
      301 aacgtgaacc caggcgaaac agttgttctg ttagggacca acggaaacgg gaagagcaca
      361 ctgttgaaat cagttatggg cctcgtaagt cctagtgtcg gtgccattag gtttgaagtt
      421 gatggccagg aaaccaatct ggttggcaag agcccggaag aagttgtgga aatggggata
      481 gtgatggttc ctgaggcaag aagacttttt cctctattga cggttgaaga aaatcttacc
      541 ttaggtgctt accgcgatgc cgccagaaaa aaaataaacg aaaatcttga tttttgtttt
      601 acaacattcc ctcgtcttaa agaaagacgg aagcagcaag ccggcagtct aagcggcggt
      661 gagcagcaaa tggtcgcggt cgcccgcgcc ttgatgtcgg aacctaaaat tcttctggtg
      721 gatgaaccgt cggtaggtct ggcgccgatc ctggtcagtc agatgatcgc caagatcaag
      781 gagctgaagg aaatcaaaaa cctcactgtc ttaatggccg agcagaactt caaccaagcg
      841 atcaagatcg ccgaccgcgg ttatatcatc gttcacggcc agattgagtt cgaaggcaaa
      901 gatgccgccg ccctcgaaaa caacgatatg attaagcaat attatttggg tgtttaaatc
      961 tgataataga caacgctgcc gacagcccta caacccgtaa taccacggtg caaaaaacgt
     1021 aaaagtcagc cacagcacga tgatcagcgg gataccgcca cgggcgaaat cggcaaaggt
     1081 ataatgcccg gggcccatca ccaggagact ggtctgatag ccaattggcg tg
//
LOCUS       DASCNL010000611         1291 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001261210, whole genome shotgun sequence.
ACCESSION   DASCNL010000611 DASCNL010000000
VERSION     DASCNL010000611.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1291)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001261210"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(41..1216)
                     /locus_tag="QF359_08145"
     CDS             complement(41..1216)
                     /locus_tag="QF359_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO86915.1"
                     /translation="MPDTTYLDWPFFDDSHREFAKELSAWAEKEIAPLQADDHHTNEA
                     LDASFGKIIDKLGKAGWLKYTVPAAYGGALDNLDVRSIALARSILGYHTGLADFAFAM
                     QGLGSGSITLFGSEEQKQKYLPEVGSGKRIAAFALSEPSSGSDVASMKVTAELDGNEY
                     VINGIKTWISNAGLADQYVLFARTGDAPGAKGLSAFIVDTDTPGLTVSERIDVIAPHP
                     LGSLTMDNCRIPTSAMLGQSGDGFKVAMATLDIFRTTVGAAALGFARRALDEAIARAK
                     SREAFGQKIGDFQIIQSKIGEMAVKIDAAALLVFRSAWVKDVQDIRVTRESSMAKLYA
                     TDSAQEVIDEAVQIWGGMGVVSGIKVETLYREIRALRIYEGTSEIQKLVIAGQAMAE"
BASE COUNT          284 a          360 c          342 g          305 t
ORIGIN      
        1 tttctattga ccgcgcatcc aactttgaag cgtttcttcg ttattccgcc atggcttggc
       61 cggcgatgac gagtttttga atttcgctgg tgccttcgta aatgcggagg gcgcggattt
      121 cacgatagag cgtctccacc ttaatcccag aaacgacacc catgccgccc catatctgca
      181 ctgcctcatc gatcacttcc tgagcgctgt cggtggcgta aagcttggcc atggagcttt
      241 cgcgcgtcac cctgatatcc tgcacatcct tgacccaggc tgagcggaac accagcagcg
      301 ccgccgcatc tattttgacc gccatctcac cgattttgct ttgaatgatc tggaagtcac
      361 cgatcttctg gccaaaggct tcacgggatt tggcccgggc aatcgcttca tccagggcgc
      421 ggcgggcaaa gcccaaagcg gcagcgccga cggtggttct aaaaatatcg agggtcgcca
      481 tcgccacttt aaagccgtcg ccggattggc cgagcatagc gctggtcggg atacggcaat
      541 tatccatggt tagtgatccc aacggatgcg gcgcgatgac atcaatgcgt tcactgacag
      601 tgagtcccgg cgtgtcagta tcgacaataa aagccgacag acctttggcc cctggcgcat
      661 cgccagtgcg ggcaaacagt acatactgat cagccagtcc ggcattggat atccaggttt
      721 ttattccgtt gatgacgtat tcattgccat caagctcggc ggtgactttc atgctggcaa
      781 cgtccgagcc actgcttggt tctgataagg caaaggcggc tatacgtttg ccgctgccaa
      841 cttccggcaa atacttttgc ttttgttctt ctgaaccaaa tagcgtgatc gaacctgagc
      901 ccaatccctg catggcaaag gcgaaatcag cgagccctgt atggtagcct aagatcgagc
      961 gggccagggc aatcgagcgc acatccagat tatcgagcgc gccgccatag gcggccggca
     1021 cggtgtattt cagccagccg gccttaccca gtttatctat aattttacca aaggaggcat
     1081 cgagcgcttc attggtgtga tgatcatcag cctgcaaggg tgcgatttct ttttctgccc
     1141 aggccgataa ttctttggcg aactcacggt ggctatcatc aaagaacggc cagtcgagat
     1201 aggtcgtatc aggcatattg tatcccttac gctacattac cgagccaccg gcaacaacaa
     1261 tggattggcc ggtgatcgag gcggaggagg g
//
LOCUS       DASCNL010000612         1476 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001261785, whole genome shotgun sequence.
ACCESSION   DASCNL010000612 DASCNL010000000
VERSION     DASCNL010000612.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1476)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001261785"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            416..799
                     /locus_tag="QF359_08150"
     CDS             416..799
                     /locus_tag="QF359_08150"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HJO86916.1"
                     /translation="MAKFDDVYYELWETTEFIAITTKGEDGPHVVGNWGDYVRKLGLR
                     DETIVMPAGSYHQTEKNLSLDNRVTLLIASRQVHGSRTPGQGCKITGTGEIVTTGAIV
                     DEVKELFPWARGALVISVEKVTTQL"
     gene            830..>1476
                     /locus_tag="QF359_08155"
     CDS             830..>1476
                     /locus_tag="QF359_08155"
                     /inference="COORDINATES: protein motif:HMM:NF013228.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HJO86917.1"
                     /translation="MDWSIKYNPAYWEGKRLAYPEVSKEHPKFAQSIAIGNLLFVSGC
                     SGQDTLSGQSAPDNAGDQVGVALEKARKALEAAGSSMANIVKTFFLVRSLDDYQAVRK
                     AETEYYEQYAPLLIEQPPAATLMVIPELARPEYLVEYEVIAALDRDAPDWGVTYYPEF
                     WGGKELAYPHVPKEHAKFARAQVVGNLVIVSGCQALDHNTVKVETMDFTEQSEIVL"
BASE COUNT          382 a          363 c          371 g          360 t
ORIGIN      
        1 ctcctggttt tcggcatcat agcggagcgg tccattggtg accggtcaga ccagaatttc
       61 aagcagcttg agatcaacag tttgagcgtt cattactctc tcaatcactt ctgatattct
      121 gtctcattca taactcctat ctggttatga tgagccagaa actctctctt atcaaatact
      181 acaagctagt gccatagaca ctgacggggg acacaatttg tcctaaccat ttatttctcc
      241 aatattagtg ataatcaagt gttattttgg tgtaattaat taccatttga aaaatctttt
      301 taggccctcg ctgtcgcacc ctcatcaaga tttaatttta agtgcagagt agtgctgtct
      361 tttaccgcaa cgtcggttat gctctcttta aataattgtt aggggggaat tcattatggc
      421 taaattcgac gatgtctatt acgaattgtg ggaaaccacc gagtttattg caatcaccac
      481 caagggtgag gacggtccgc atgtggttgg caattggggc gactatgtcc gcaaactggg
      541 actgcgggat gaaaccatcg tcatgccagc cggtagctat catcaaacgg agaagaatct
      601 gagcctcgat aaccgggtga cgctgctcat cgcttcgcgc caagtgcacg gctcccggac
      661 acctggccag ggctgcaaaa ttaccggcac cggtgaaata gttacgaccg gagccatcgt
      721 agatgaggtt aaagaactct ttccctgggc ccgcggcgca ctagtaatca gcgtcgagaa
      781 agtgactaca cagctgtaat aagtacctaa attaaacgga gggaaaaaga tggattggag
      841 catcaaatat aatccagcct attgggaagg taaacggctg gcctatccgg aagtgtcgaa
      901 ggagcaccca aagttcgccc aaagcattgc catcggtaat ctgctattcg tctccggctg
      961 cagtggccag gatacgcttt ccggtcagtc ggcaccggac aatgcgggtg atcaggttgg
     1021 cgtcgcgctc gaaaaagcca ggaaggcttt ggaagccgcc ggcagctcga tggcaaatat
     1081 cgtcaaaaca tttttcctgg tacgcagcct ggatgactac caagccgtgc gtaaagcgga
     1141 aacagaatat tatgaacaat acgcccccct gttgatcgag cagccaccgg cggcaacgct
     1201 gatggtgata cccgaactgg cccgtccgga atatctggtc gaatatgaag ttatcgccgc
     1261 cctcgaccgc gacgcgcccg actggggcgt tacttattat cctgaatttt ggggcggcaa
     1321 ggaattggcc tacccccatg tgcccaagga acacgccaaa ttcgcccgcg cccaggtggt
     1381 tggtaatctg gttattgttt cgggctgtca agcgctcgac cataacacgg ttaaagtgga
     1441 aaccatggat ttcaccgagc aaagtgaaat cgtgct
//
LOCUS       DASCNL010000613         6188 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001262506, whole genome shotgun sequence.
ACCESSION   DASCNL010000613 DASCNL010000000
VERSION     DASCNL010000613.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6188)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6188)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6188
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001262506"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /gene="ccmB"
                     /locus_tag="QF359_08160"
     CDS             <1..469
                     /gene="ccmB"
                     /locus_tag="QF359_08160"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HJO86918.1"
                     /translation="MDRLFQTDFEDGSLDLLILTPQPLELLVLAKTISHWLTTGLPLI
                     IISPLLALLLNMETSGYGVLLATLALGTPTLSLIGAIGAALILGARRSGVLLSLLILP
                     LFIPTLIFGVSAVDAALIDLPSKPQLLVLGGLLLASFALCPWASAAALRQAAE"
     gene            595..1317
                     /locus_tag="QF359_08165"
     CDS             595..1317
                     /locus_tag="QF359_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HJO86919.1"
                     /translation="MFNYFANPTRFLRLTSKLQPIAMVVTLITMGAGLYYSLFQSPPD
                     YQQSETVRMMYVHVPAAWMAMFCYVALAASSAVALIWRHMVADIVAKSTAPIGACFTF
                     LALATGSLWGKPMWGTWWVWDARLTSVLILFFLYLGYMVLYNAFDEPTRGARAAAILA
                     IVGVINVPIIKFSVDWWNTLHQPASVVKMDGPAIHSSMLTPLLLMAVGYTAFYFWVLF
                     IRSRAELSANKVRALRIRQAEG"
     gene            1321..1494
                     /gene="ccmD"
                     /locus_tag="QF359_08170"
     CDS             1321..1494
                     /gene="ccmD"
                     /locus_tag="QF359_08170"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF016856.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HJO86920.1"
                     /translation="MAEFLSMGGYGPFICSAFGLSAVVLIGILIQSQRFLKISEAELN
                     SLQPEDTSDGVKA"
     gene            1478..1942
                     /gene="ccmE"
                     /locus_tag="QF359_08175"
     CDS             1478..1942
                     /gene="ccmE"
                     /locus_tag="QF359_08175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HJO86921.1"
                     /translation="MALKRKHRRLSFMALCLLVLGAAAALILTAFEDNIVFFHNPTEI
                     TEKFAKNELKPTQRLRVGGLIEKGSVSKTADGVTNRFKVTDLNKSIVVEFRGILPDLF
                     REGQGIVAEGRYNNAVFTATEVLAKHDETYMPPEVAEALKKSGQWKPVAKEK"
     gene            1968..3953
                     /locus_tag="QF359_08180"
     CDS             1968..3953
                     /locus_tag="QF359_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HJO86922.1"
                     /translation="MIVEIGHFALILALFVAALQGTLSMIGTHRRDASLMAIAAPAAL
                     VQLALVMLSFAALTWAFVTSDFSVLNVAQNSHTAKPMLYKISGVWGNHEGSMLLWALV
                     LALYGGAIAAFGNNLRPSLKVRVLGVQALIATGILAFVLLTSNPFLRLSPAPVNGNGL
                     NPLLQDPGLAFHPPLLYLGYVGLSITFSFAVAALIEGRVDTAWARWVRPWTLAAWGFL
                     TAGIVLGSWWAYYELGWGGWWFWDPVENASFMPWLAATALLHSAIVSEKRDTLKSWTI
                     FLAIIAFALSLLGTFLVRSGVITSVHAFASDPTRGVFILLLLVVTIGGAFALFAWRGP
                     SLKGSGLFQPISREGGLLLNNFLLMVAAASILLGTLYPLFIDVLELGKVSVGAPYFES
                     VFIPMMIPMILVMGIAPFLKWKRGNISSASGQLKIAAMITVIGGGLSWLIIDRANALA
                     AFGIALAIWLFVATLIELAGRVKLFRVPFSNSIKRLLRQPRASWGMTLAHAGLAIAIA
                     GMTASSAWRVEKIQVMKFGDSVDVAGYTYTLNSVNEFLGPNYKATRGRFSVTRGDSFS
                     LVLEPEKRVYTTRGMPTTEAAIHPTFLGDLYAVVGDRDKKSGGYITRLYFNPLVPWMW
                     AGSLIMVLGAGISLSDRRHRIGAPAKSKIVPRGAPAE"
     gene            3950..4486
                     /locus_tag="QF359_08185"
     CDS             3950..4486
                     /locus_tag="QF359_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HJO86923.1"
                     /translation="MNRLMYYVPLVLLGILAVYFSAGLGRNPATLESVLINQQVPEFS
                     LPPIEGSSKGIAKVDLKDQVVLVNIFGSWCKACWIEHPFLIDLKEKGVVPVYGINWRE
                     SNRQAGPRWLKKFGDPYTLIGDDPKSKGAIAFGVSGAPETFFVNKHGIIRYKHMGPIT
                     EQNWNDTLKPILEALRKE"
     gene            4483..4905
                     /locus_tag="QF359_08190"
     CDS             4483..4905
                     /locus_tag="QF359_08190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HJO86924.1"
                     /translation="MKQLFLILAIFLLPLAANAVNPGEILKDPVLEKRARAISKGLRC
                     VVCQNQSIDDSDAQLARDLRVLVREQLVAGDSDQAVVDYVVSRYGDFVLLRPPVKAAT
                     LVLWFGPVVIALIGAMGLVLFFRRQKRYAAEINKEVGE"
     gene            4902..6023
                     /gene="ccmI"
                     /locus_tag="QF359_08195"
     CDS             4902..6023
                     /gene="ccmI"
                     /locus_tag="QF359_08195"
                     /inference="COORDINATES: protein motif:HMM:TIGR03142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HJO86925.1"
                     /translation="MSLWIVIAAILLITLAIVVVPLLRGNKASAADHDAIVYQDQLTE
                     IESDVERGLLSSTEAETLIIEINRRLDKTVADETSGATTDSFQFSIVIGIIVIVPLAA
                     LGLYQHLGSPQKPDLPFASRSFAPPQSAAQAKTNAEMARLVDALQQRLEKNPGKLEGW
                     LLLGRSLVTLERYRDASNAFKRAFKLDTSRADIAASAAKTAFMAAGGKFDRDARYFFK
                     TARKLNPREHKALFYLGLDLAEQKKYGEAIQLWVDLVAISPVGAPWLDTVRHRLVDAA
                     KAGNLKITDFSPRLEVPASSTPGPTQDNIKAAQGMSDQDRQAFFRTLVKRLAERLKST
                     PDDIDGWRRLARAYQMLGETQKAAAVKERVKLLAGKLNK"
BASE COUNT         1333 a         1582 c         1642 g         1631 t
ORIGIN      
        1 gatggatcgc ttgttccaga cggatttcga agacggcagt ctcgatttgc tgatcttaac
       61 gccccagccg ttggaacttt tagtattagc taagacaatc tctcattggc tgaccacggg
      121 cctgccgcta atcattatct caccgttatt agctctgtta ttgaatatgg agacgtcggg
      181 ctatggcgtc ttgctagcga cgctggcgct tggcacacca acgctaagtt tgatcggcgc
      241 catcggagct gccttgattt tgggcgcgcg gcgaagcggc gtcttactgt cgctgttgat
      301 tttgccgctg tttatcccca ccttgatatt tggggtgagc gccgttgatg ctgcgcttat
      361 cgatctgccg agtaaaccgc aattgttggt gttgggtggt ttgttgttgg cgtcatttgc
      421 gttgtgtccc tgggccagtg ccgccgccct tcgccaagcc gccgaatgag ggtaaaatta
      481 ttaccaaaaa gtaatgtatt attgagtaag atcaatttgc atctagctaa aataagctat
      541 atccagtacc gaaaattatg ccccgcaatt taattaagat caccgttgag aagcatgttt
      601 aactattttg ccaatccgac ccgttttctg cgtcttacat cgaaactgca gccgattgcg
      661 atggtcgtca cactcatcac catgggtgca ggtctatact attctctttt ccaatcaccc
      721 cctgattatc agcagagcga aaccgtgcgc atgatgtatg tccatgtgcc agccgcttgg
      781 atggctatgt tttgttatgt cgccctcgct gcttccagtg ccgtggcact gatctggcgg
      841 catatggtcg ccgacatcgt cgctaaatcg acagcgccaa tcggcgcttg ttttactttt
      901 ctagcgctcg ccaccggctc gctttggggt aagccgatgt ggggcacttg gtgggtgtgg
      961 gatgcacggc tgacctcggt attgatcctg ttctttctct atctcggcta catggttttg
     1021 tataatgcgt ttgatgaacc aacccgcggc gcccgcgctg ctgcaatatt ggcaatcgtc
     1081 ggcgttatca atgtgccgat tattaaattt tccgtcgact ggtggaacac cctgcatcag
     1141 ccagccagcg tcgtcaaaat ggatggcccg gcgatccact ccagcatgct gacaccatta
     1201 ttgttaatgg ctgtcggtta taccgcattt tatttttggg tgttgttcat ccgtagccgc
     1261 gctgagctca gcgccaacaa agtgcgcgct ctgcgcattc gccaggcgga aggctagttg
     1321 atggctgaat ttttatcaat gggtggttat ggtcctttta tttgttcggc ttttggcctg
     1381 tcggcagtgg tgctgatcgg catactgatc caaagccagc gcttcctaaa aatctctgag
     1441 gccgaattaa attccctgca acctgaggat acctccgatg gcgttaaagc gtaaacatcg
     1501 tcgcctgtcc ttcatggcgc tttgcttatt ggtattgggt gcggcggcgg cgcttatcct
     1561 gactgctttc gaagacaata ttgttttttt ccataaccca accgaaatca ctgagaaatt
     1621 tgccaaaaac gagttaaagc caacccaacg gctgcgggtc ggtggcttga tcgagaaagg
     1681 cagtgtcagc aaaaccgccg atggtgtgac caatcgcttt aaagtgaccg atctcaacaa
     1741 gtccattgtg gtagagttcc ggggaatttt gcctgatctt tttcgggaag gtcaaggaat
     1801 tgtcgccgaa gggcgttata ataatgcggt ctttactgcc accgaagtac tcgccaaaca
     1861 tgatgaaacc tatatgccgc cggaagttgc tgaagcgttg aaaaaatccg gacaatggaa
     1921 gcccgtggca aaagagaaat aaatagaggc tcatcagaga agacagcatg atcgttgaaa
     1981 ttggccattt tgctctgatc ttggcgcttt ttgtggcggc tctgcaaggc acgctgtcga
     2041 tgatcggcac ccaccggcgg gatgcgtccc tgatggcgat tgccgctccg gcagcgctcg
     2101 tgcaattggc cttggttatg ctttcctttg ccgcacttac ttgggccttt gtgacctccg
     2161 atttttcagt gctcaacgtg gcgcagaact cacataccgc caagccaatg ctttacaaaa
     2221 tcagcggcgt ctggggtaac catgaaggct caatgctcct ctgggcgttg gtcctggcgc
     2281 tctatggcgg cgccattgct gctttcggca acaatctcag accgtcgttg aaagtgcggg
     2341 tcttgggggt gcaggcgctc attgcgaccg gtattctcgc ctttgttctg ctgacctcga
     2401 accccttcct gcgtctgtct ccagcaccag tcaatggcaa cggattgaac ccgctgttgc
     2461 aggacccggg tctcgctttt catccgccat tgctttatct cggctatgtc gggctctcga
     2521 tcactttttc atttgctgtc gctgccctta ttgaaggccg ggtcgatacc gcctgggcgc
     2581 gctgggtacg cccttggacc ttggcagcct ggggattttt aaccgccggc attgtgctcg
     2641 gttcgtggtg ggcctattac gagcttggct ggggcggctg gtggttttgg gacccggtcg
     2701 agaacgcatc cttcatgccg tggctggcgg caactgccct gctgcattca gcgatcgtct
     2761 ccgaaaagcg cgacacctta aaaagctgga cgatatttct tgccattatc gcctttgcgt
     2821 taagcctctt gggcaccttc ctggtgcgct ccggcgttat tacctcggtg catgcttttg
     2881 catccgaccc tacccgcggc gtctttattc tattgctgct ggttgtcacc atcggtggcg
     2941 cgtttgcact gtttgcctgg cgtggtccga gccttaaggg cagcggccta ttccagccga
     3001 tctcaagaga gggcgggttg ttgctcaaca atttcctgct aatggtcgcg gcggcatcga
     3061 ttttgctcgg cacgctttat cctttattta tcgatgtgct tgagcttggc aaagtatccg
     3121 ttggtgcgcc ttatttcgaa agcgttttta tcccgatgat gatcccgatg attttagtta
     3181 tgggcatcgc tcccttcctc aaatggaaac gcggcaatat ttcgagtgcc tcggggcaat
     3241 tgaaaatagc cgctatgatt acggtgatcg gcggtggact cagctggctg attattgacc
     3301 gggccaacgc cttggcggcc tttggtatcg ccctggcaat ctggctgttc gtcgcaacac
     3361 tcatcgagct tgccgggcgc gttaaattgt tcagagtgcc atttagcaac agtataaaac
     3421 gtctattgcg ccagcctcgc gccagctggg gcatgacctt ggctcatgca ggtctcgcca
     3481 tcgccattgc cggtatgacc gcatcaagcg cctggcgggt ggagaaaatc caggtgatga
     3541 aatttggcga tagcgttgat gttgccggtt acacctacac cctcaatagc gtcaacgaat
     3601 ttctaggacc aaattacaaa gccactcggg gtcgttttag cgttaccaga ggcgacagtt
     3661 ttagtttggt tctagaaccg gaaaaacgtg tttacaccac ccgtggcatg cccacaaccg
     3721 aagccgccat ccatccgact ttcttaggcg atctttatgc cgtggtcggc gaccgggata
     3781 aaaaaagcgg cggctacatt acccggctgt attttaatcc gctggtgcct tggatgtggg
     3841 cgggctcact catcatggtc ttgggcgccg ggattagtct cagtgaccgc cgccaccgca
     3901 tcggcgcgcc ggctaagagc aaaatcgtgc ccagaggcgc gcccgcagaa tgaaccgctt
     3961 aatgtattac gtacctcttg ttctactggg aatcctagcg gtctatttct cggctggtct
     4021 tgggcgcaac cctgcgacac ttgaatcggt cttaatcaat cagcaggtgc cggaattttc
     4081 attgcctccc atcgagggat caagcaaagg catcgccaag gttgatctta aagaccaagt
     4141 cgtcctggtt aatattttcg gctcttggtg taaagcctgc tggatcgagc accccttcct
     4201 gatagattta aaggaaaagg gcgtggtgcc agtctatggc atcaattggc gagaatccaa
     4261 ccgtcaagcg ggcccaagat ggctcaaaaa atttggtgat ccctacacgc tgatcggcga
     4321 cgatcctaaa agcaaagggg ccattgcgtt tggtgttagc ggcgcaccgg aaaccttctt
     4381 tgtcaataaa catgggatca tccgctacaa gcatatgggg ccgataaccg agcaaaactg
     4441 gaatgacacc ttaaagccga tcctggaggc gctgaggaaa gaatgaaaca gctatttctg
     4501 atattagcaa ttttcttgtt gccgcttgcc gcgaacgccg taaatccagg cgaaatcttg
     4561 aaagacccag tgcttgaaaa acgcgcccgc gcgatcagca aaggactacg ctgtgtggtc
     4621 tgccaaaacc aatcaattga tgattcggat gcgcaactgg cgcgcgatct ccgtgtcttg
     4681 gtgcgggagc aattggttgc tggtgatagc gatcaggcgg ttgttgatta tgtcgtctcg
     4741 cgctatggcg attttgtgtt gctacgccca ccggtcaaag ccgcgacttt agtgttatgg
     4801 tttggccccg tcgtgatcgc cttgatcggc gcaatgggat tggtcttgtt ctttcgccgc
     4861 caaaaaagat acgctgcgga aatcaataag gaggttggcg agtgagcctc tggatcgtca
     4921 tcgccgcgat cctgctgatc accttggcaa ttgtcgtggt cccattattg cggggaaata
     4981 aggcgtcagc tgctgatcat gatgccatcg tttaccaaga tcaactgact gaaattgaaa
     5041 gcgatgttga acgcggtctg cttagctcca cagaagctga gactttaata attgaaatta
     5101 accggcgctt ggataaaacg gtagctgatg aaactagcgg tgccacaacc gatagcttcc
     5161 agtttagcat tgtgattggt attattgtta ttgttcccct tgctgcactt ggcctctatc
     5221 agcatttggg gtcaccgcaa aaaccagacc tgccttttgc gtcacgcagt tttgcgccgc
     5281 cgcaatccgc tgcccaggcg aaaactaatg cggaaatggc gcgactggta gacgctctgc
     5341 agcaacgcct ggagaaaaat cccggtaagc ttgaaggttg gctgctgctg ggccggtctt
     5401 tggtgacatt ggaacgctac cgggatgcct caaacgcttt caaacgagcc ttcaaattgg
     5461 atacttctcg cgccgatatc gccgctagtg ccgctaaaac agcctttatg gcggcaggcg
     5521 gaaaatttga ccgcgatgcc cgttacttct ttaaaaccgc ccgaaaattg aatccgcggg
     5581 aacacaaggc gctcttttat ctcggccttg accttgctga acaaaaaaaa tatggcgaag
     5641 ctattcagtt gtgggtggat ttggtggcga tctcgccagt aggcgcaccc tggcttgaca
     5701 ccgtacgcca tcgtttagtc gatgccgcca aggccggcaa tttaaaaatt accgatttct
     5761 cgccgcgcct agaagtgcca gccagttcaa cacctggtcc aacccaggac aacatcaaag
     5821 ccgcacaagg gatgtctgac caagatcgcc aagctttttt ccgcacgttg gtgaaacgcc
     5881 tggcagaacg gttaaaatca actcccgatg acattgatgg ttggcggcgg ctggcccgcg
     5941 cgtatcagat gttaggtgaa acccaaaaag cggcggcggt gaaggaacgc gttaaactgt
     6001 tggcgggtaa actaaataag tgatttttgc cacttggcat cacggcctaa gtgccatatt
     6061 ttctgggtta tagcactcaa tgggaaacca ctgtctgaac ataaatatcg tcttgtgaca
     6121 cgcactgatt ttgatggcgt cgttgccgat gggttgttga ttaagcgcga catgatcagt
     6181 gatgagat
//
LOCUS       DASCNL010000614         3000 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001262525, whole genome shotgun sequence.
ACCESSION   DASCNL010000614 DASCNL010000000
VERSION     DASCNL010000614.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001262525"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..799
                     /locus_tag="QF359_08200"
     CDS             <1..799
                     /locus_tag="QF359_08200"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO86926.1"
                     /translation="RNPRIQVKMVLDGVADLAWIVPAYTPGRFTDNQVMELPLILRNS
                     KESSVAITRLYNKKLLRGYDDFYVVMLATTGPYAIHTTKPVKKISDLAGMKIRAGGPI
                     AGDSLRALGAVPVGMPIPAVAENISKGILNGSAAEWNVMYAFRIVDVAKNHYMAKLGT
                     VPLALLMNRKKFDSLPKRTREIIRKDSGEKLSRKLGQVFYAIQAVKLAETKKRAGHSF
                     VFPSKADLKKWDDTLNPVIDNWVKKHPKGQMLLTALQKELADIRAGR"
     gene            905..1351
                     /locus_tag="QF359_08205"
     CDS             905..1351
                     /locus_tag="QF359_08205"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO86927.1"
                     /translation="MAIMTITDVLMRWLLNSPIDGVADAGRLIVAVIIASFFPAALAE
                     KHHISIAFLGSWLGQRAKSWLEVMASIVTSIFFTILGWQFVVYTIDLHQNSETTWLLG
                     WPVAPWWGVASLFIVICVPVQLIVVLGNIKAAVNNTSEAINIPNNS"
     gene            1368..2681
                     /locus_tag="QF359_08210"
     CDS             1368..2681
                     /locus_tag="QF359_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO86928.1"
                     /translation="MDPILIALLGLIGMFALIALHIPIGVAMAISGAVGFGYLTGWRP
                     AVSLFATEPVSIFASMDLAVIPLFLLMGSFAGISGLSSDIYRLAYAFVGHRRGGLALA
                     TIGGCAGFGAVCGSSLATAATLGRVALPEMLDRGYSPTLATGCVAAGGTLGMLIPPSV
                     IMVIYAFLAEQFVITMFVAALIPGLIAVLAHFITIGILVRRNPESGPAGPRMSWSERL
                     DILKGSWGVLLLLFTVIGGIYGGVFTVNEAAALGAGLAFMFTVARRKLTLASFRQILS
                     DTASNTAMIYLIISGASIFSSFITLTKMPDALVTAISAADLSPLVVIFVLFAVYLVLG
                     SIFDTIGAMVITMPFVLPLILDLGYHPIWWGIILVMVIEVGMITPPIGMNVFVLFGVA
                     DGIPLKTIFKGIFPFFYADLIRITIIILFPALALWLPGILGYNLN"
BASE COUNT          669 a          695 c          760 g          876 t
ORIGIN      
        1 ccgaaatcca agaattcagg tgaagatggt tttggatggt gttgctgatt tagcttggat
       61 cgtcccggct tatacacctg ggcgatttac tgataatcaa gtgatggaac tacccttaat
      121 tttgcggaat tcaaaagagt cttcagtcgc tatcacacgt ctttacaata aaaaattgct
      181 gcgtggctac gatgatttct acgttgtgat gttagccacg accggtccct atgccattca
      241 tacaaccaag ccagttaaga aaatctccga tctcgcaggc atgaagattc gtgctggagg
      301 tccgattgcc ggtgactctt taagggcttt gggggccgtt ccggttggaa tgccgatccc
      361 ggcggtcgcg gaaaatatca gcaaaggcat tctcaatggt tctgctgcgg aatggaatgt
      421 tatgtatgcg tttaggatcg ttgatgtggc caagaaccac tacatggcta aacttggtac
      481 cgttcccctt gctcttctca tgaaccggaa aaaatttgat agcctgccta aacggaccag
      541 agagatcatt cgaaaagaca gtggcgaaaa attgtcacgc aaactaggtc aagtttttta
      601 cgcaattcaa gctgtgaaac tggcggagac taaaaaacgc gcagggcatt ccttcgtgtt
      661 tccttcaaaa gcggacctga aaaaatggga tgatacactt aacccggtta ttgacaattg
      721 ggtgaaaaaa catcccaagg gtcaaatgct gttgacggct ctccaaaagg aactcgctga
      781 catccgggct ggtcggtaat acggttggtt tcttaccttg ctcaataagt tttcggtatt
      841 ggacgcgcat tgtaatcggg cagtgcgcgt tcttgccgtc atcggtctca ttgggctagt
      901 aataatggcg ataatgacaa ttacagacgt gttgatgcgt tggttgctca atagtccgat
      961 tgatggcgtc gctgacgccg gcaggctcat cgtcgcggtt attattgcct cttttttccc
     1021 ggcggctctg gccgaaaagc atcatatatc aatagccttt ctgggcagtt ggttaggaca
     1081 acgcgccaaa tcctggcttg aagtaatggc gtcaatcgtc acatctattt tcttcactat
     1141 cttgggttgg caatttgtcg tgtacacgat cgatttgcac cagaacagcg aaacaacatg
     1201 gcttttggga tggccggtgg ctccctggtg gggcgtcgct tcattgttta tcgttatctg
     1261 cgttccggtt cagttgatcg tcgtcttggg caatataaaa gccgctgtca ataatacgtc
     1321 cgaagcaatc aacatcccaa ataatagcta gcgggcattg tagtttgatg gatcctattc
     1381 ttatcgcctt gctcggtctt atcggaatgt ttgcgctcat cgccttacat attccgatcg
     1441 gtgtggccat ggccatatcg ggcgccgttg ggttcggata tttgacgggg tggagaccag
     1501 ctgtttctct cttcgccaca gaaccagtta gcatattcgc cagtatggat ttggcggtca
     1561 tacctctatt tctcttgatg ggaagttttg ccgggatcag cggtctgtcg tccgatatct
     1621 atcgtttggc atacgccttc gttggtcacc gaaggggcgg attggccctg gcgaccattg
     1681 gcggatgtgc gggctttggc gccgtctgcg ggtcgtctct ggcgacggcg gcaaccttgg
     1741 gacgggttgc cttaccggaa atgttggacc ggggttattc accaaccctg gcgaccggtt
     1801 gtgttgccgc gggtggcaca ctgggcatgt tgatcccacc ttctgtgatt atggtgatct
     1861 acgcatttct cgccgaacaa tttgtcatca caatgttcgt tgcagccttg atccccggac
     1921 tgattgccgt actggcccac tttatcacca tcggaatttt ggttcgacgt aatccggaat
     1981 cgggaccggc gggaccccgc atgtcgtggt ccgaacgcct ggacattttg aaaggaagct
     2041 ggggggtttt actgctttta tttaccgtga tcggcggaat ttatggcggc gtatttacgg
     2101 taaatgaagc cgctgccttg ggggccgggt tggctttcat gtttaccgtt gcccgccgca
     2161 aattgacctt ggcgtccttc cgacagattt tatcggatac cgcttccaac acggccatga
     2221 tttacctaat catttccggc gcttcgattt tctccagttt cattaccttg acaaaaatgc
     2281 cggatgcatt ggtgacggca atttctgcag ctgatctttc tcctctcgtt gttatatttg
     2341 tcctctttgc cgtttacctc gtcctgggta gtatattcga caccattggc gccatggtga
     2401 ttaccatgcc cttcgttttg ccgcttattt tggatctcgg ctatcacccg atctggtggg
     2461 gcatcatcct agtaatggtt attgaggtcg gaatgatcac gccacccatc ggaatgaatg
     2521 tctttgtctt gttcggtgtc gccgatggca taccgttgaa aacgatattc aaaggaatat
     2581 tcccattttt ctacgccgac ctaattcgca taacgatcat catacttttt ccggcgttag
     2641 ccttatggtt gcctggaatt ctggggtata atttaaactg attaattcga ttgtgggggc
     2701 cttgtcatgt taacagatgg cattgtcaca ttaatatggt cagaatacac tctcagacaa
     2761 tgtccgttat gctagtggaa tttgatgtaa ccgccacgac ctaggcgccg gttcgtagaa
     2821 gtatcaagcg tattccgcag tttacaaagg gccttttaaa aaaaatatat ttagaggtga
     2881 aagttatgag aataattgat ccacatttac atttgaatat gatgcgaggc aaagaccttg
     2941 atgcgctagc gatcgcaggg gtagaggccg ctgtgctccc tatcccacat attatgccat
//
LOCUS       DASCNL010000615         1519 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001262798, whole genome shotgun sequence.
ACCESSION   DASCNL010000615 DASCNL010000000
VERSION     DASCNL010000615.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001262798"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..979
                     /locus_tag="QF359_08215"
     CDS             <1..979
                     /locus_tag="QF359_08215"
                     /inference="COORDINATES: protein motif:HMM:NF015983.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJO86929.1"
                     /translation="FNQPWREDLPKLDRYAHLDVGDGTTKIVGYTEASRGCKHTCCHC
                     PVVPVYQGYFRIIPVDIVLADIRQQIAKGAEHISFGDPDFFNSPRHAITIIEALFKEF
                     SDITYDVTIKIEHLLKHRELLPKLKVTGCLFITTAVESTEEDILRLLDKGHSQADFKN
                     STEIVHAAGLTLAPTFVPFTPWTTKEGFLQLLETIAELDLIENVAPIQLAIRLLIPNQ
                     SALLGLTEIQPHLDGYDHAALSHRWHNRDQSVEKLCSAVQEIVEAGAREKRSRRATFT
                     AIYTAALAACERPAIDLPDLMNASEIAIPSMSEPWFCCAEPTQEQLARL"
     gene            1048..>1519
                     /locus_tag="QF359_08220"
     CDS             1048..>1519
                     /locus_tag="QF359_08220"
                     /inference="COORDINATES: protein motif:HMM:NF037047.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86930.1"
                     /translation="MMRLLLLIPSTSYRVSDFLSAAHRLGVDVTVGSDEQQVLESISD
                     SGTIKLDFSDPEKAAGEIGGFHASYPISAVVAVDDITCVIAAIASIKLGLPHNDPAAV
                     RATGNKMLLREAFTKADLPSPKHQTLALDADPKIAAEQVDYPCVLKPLNLSASRG"
BASE COUNT          387 a          411 c          349 g          372 t
ORIGIN      
        1 attcaaccag ccttggcgtg aggatttacc aaaacttgat cgctatgccc atttagatgt
       61 tggtgatggc acaaccaaaa ttgtcggcta caccgaggcc agccgcggct gcaaacacac
      121 ctgctgtcat tgtccggtcg tgccagtcta tcagggttac tttcgtatta ttccggtgga
      181 tatcgtgctc gccgatatcc gccaacaaat tgccaaaggt gctgaacata tcagtttcgg
      241 tgatccagac ttttttaaca gtccccgcca cgcgataaca atcattgaag ccctcttcaa
      301 agaattctct gatatcactt acgacgtcac gattaaaatt gaacatctcc tgaaacaccg
      361 ggaactcttg ccaaaattaa aagtgactgg ctgtctattt atcactactg cggttgaatc
      421 aactgaggaa gatatattaa ggctgctcga caagggtcac agccaagctg attttaagaa
      481 ctccactgaa atagtacacg ccgctgggtt gacactagct ccgacctttg tgccgtttac
      541 gccgtggaca accaaagaag gcttcttgca actactcgaa accatagctg aattggattt
      601 gatcgaaaac gttgcgccga ttcaactggc cattcgacta ctcattccca atcaatctgc
      661 attgttaggt ttgactgaaa tccagccgca tctcgatggc tatgaccatg cggccttgag
      721 ccatcgctgg cataaccgcg atcagagcgt ggaaaagctc tgttccgcag ttcaggaaat
      781 tgttgaagcc ggtgcgcggg agaaacgctc acggcgtgct acgtttacgg caatttatac
      841 ggcggccctg gccgcttgcg agcgcccggc tatcgacctg cccgacttaa tgaacgcctc
      901 cgaaatcgcc atcccaagta tgagcgaacc ctggttctgt tgcgccgaac caacccagga
      961 acaactcgcg cggctttaaa cacctttcaa atagtaaaca ttgtgctaaa gctaccaggt
     1021 acctttatta catagtaaat ctcgaaaatg atgcgccttc tcctcctgat accttcaaca
     1081 tcctaccggg taagcgattt tttgagcgcc gcccatcggc taggtgttga tgtgaccgtc
     1141 ggctcggatg agcaacaagt gctggaaagc atttcagaca gcggtaccat aaaactggat
     1201 ttttctgacc cggaaaaggc cgctggggaa attggaggct ttcatgccag ctatcctatt
     1261 tcagcggttg tcgcggttga tgatatcacc tgcgtcatcg ccgccatcgc atcaataaaa
     1321 ctgggattac cgcataatga tcccgctgcc gttcgggcga cgggcaacaa aatgctgtta
     1381 cgcgaagctt ttaccaaagc agatttaccg tcgccgaagc atcaaacact tgcgctcgac
     1441 gccgatccta aaattgccgc tgagcaggtg gattaccctt gcgtgctcaa accgcttaac
     1501 ctttccgcta gccgcggcg
//
LOCUS       DASCNL010000616         3428 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001266968, whole genome shotgun sequence.
ACCESSION   DASCNL010000616 DASCNL010000000
VERSION     DASCNL010000616.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001266968"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(94..1182)
                     /locus_tag="QF359_08225"
     CDS             complement(94..1182)
                     /locus_tag="QF359_08225"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HJO86931.1"
                     /translation="MNELVDHLKKRIAAEGPLSVADYMTETLANPKFGYYMIGDPLGK
                     EGDFITAPEISQMFGELIGLWCAVVWQQMGSPASIKLVEIGPGRGTLMADALKALTMV
                     PAFLDAIEAHLIETSPALIKRQQRNLASLELNITWHESFAEMPEGPFILFANELFDAL
                     PIRQFEKSVAGWGERKVGCNDAGDLIWLLDQSAEVPEVLITPDLNDTPPGSIVELCQP
                     GVTLTAAIAESIAEFGGVALFIDYGHDQSGIGDTLQAVKDHQYHDVLLDPGETDLTAH
                     VDFERLAETARAAGASAFGAITQADFLRCLGIKQRAQQLKDAASTRQKADIISSLNRL
                     IGADEMGTLFKVLAITHPDQPIPEGFNG"
     gene            complement(1192..1986)
                     /gene="lgt"
                     /locus_tag="QF359_08230"
     CDS             complement(1192..1986)
                     /gene="lgt"
                     /locus_tag="QF359_08230"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HJO86932.1"
                     /translation="MTFTLAFPNIDPVIFAIGPFAVRWYALAFIAGLLIGWKYITWYV
                     SKPPHAMVRKNVDDFLVWITLGVVLGGRLGYAGFYNAEFYLSNPLAIFQVWRGGMSFH
                     GGLIGVIVVILLFCRQRQLDYWAVGDTVACAVPIGLFFGRIANFINGELFGRVTNVPW
                     AMVFPHGGLLPRHPSQLYEALLEGLVLFIILYVLSKNERWRLKTGFLSGVFMIGYAAA
                     RGFVEFFRQPDAHIGFLFGNFTMGQLLSVPLVLLGLYLIFRTPKTV"
     gene            2138..3043
                     /locus_tag="QF359_08235"
     CDS             2138..3043
                     /locus_tag="QF359_08235"
                     /inference="COORDINATES: protein motif:HMM:NF015366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HJO86933.1"
                     /translation="MTFPDKPIRIILPFGPPGFSSRVGFALGPHIAETLGQEIVFEHI
                     TGGQGGANGPRAAAEAEPDGYSLLMGTIGDIALLPHIMPEYGIDPLTDLTPILKIADT
                     PNILIANLSLGVTTLDDLIAAAKANPGSIRYHAINERSIHRLEFKSFISETDIVLTEV
                     PPKGGSEGAIEAILDGDIDLTITTGPRLLESIQAEDVFAIAAICPERTNVYPYVPTMK
                     ELGLTSTGSGSWMGLFAPAGVPEDIMEALFNAAHKACTEPDVIAVLTEQAATVNPSTS
                     PAEALTFVESETERLRQACMAAGFA"
     gene            complement(3040..>3428)
                     /locus_tag="QF359_08240"
     CDS             complement(3040..>3428)
                     /locus_tag="QF359_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJO86934.1"
                     /translation="TGKARLFQSHHPEYKDGGQMRDFIWVGDCVDVMLWLYENRGVSG
                     LFNCGTGKARAFKDLAVAVFAALDKEPNIDYIPTPENIRDKYQYFTEAKMARLRAAGY
                     NAGSTSLEDGVKRYVQDYLSADDPYC"
BASE COUNT          913 a          927 c          818 g          770 t
ORIGIN      
        1 ctcaccccgc cttcccgggt gaaaaaacca tgtcgaatgg ctggactatt tgtaaattcg
       61 tcaattgtaa tcactggttt cgctcaaaca gtgttagccg ttaaatcctt ctggtattgg
      121 ctgatcggga tgggtgatcg ccaaaacctt aaacagggtg cccatttcat ccgcgccgat
      181 caatcgattt aagctcgaga taatatccgc cttttggcgg gtcgaggcgg catccttcaa
      241 ttgctgggcg cgctgcttta tacctaagca cctcaaaaag tctgcttgag tgatcgcacc
      301 aaaagcagaa gcgccagctg cacgggcagt ttctgccaat cgttcgaagt caacatgggc
      361 ggttaaatcg gtttctcctg gatcaagcaa aacgtcatga tactgatgat ccttgaccgc
      421 ttgcagagtg tcaccaatgc cagattgatc atgtccataa tcaataaaca gcgcgacccc
      481 gccaaattcg gcaattgatt cggcgatggc tgccgtcaaa gttacacccg gttggcaaag
      541 ctcgacaata cttcctggag gcgtgtcatt taaatcaggc gtaattagaa cctccggcac
      601 ctcagcactt tgatccaaca gccagattag atcacccgca tcattgcaac cgactttacg
      661 ctcgccccaa ccagcaaccg acttttcgaa ctggcggatc ggcaaggcat cgaacaattc
      721 attggcaaac agaataaacg ggccttccgg catttcggca aagctttcat gccaagtgat
      781 gttgagttct aagctggcga gattgcgctg ctgacgtttt attaaagctg ggctagtctc
      841 gataaggtga gcttcgatgg catctaaaaa agccggcacc attgtcagcg ccttcaatgc
      901 atcagccatc aatgtgccgc ggccaggacc gatttcaact agtttaatgc tggccgggct
      961 gcccatctgc tgccaaacaa cggcgcacca gagaccgatc agctcgccga acatctgact
     1021 gatttccggt gcggtaatga aatctccttc cttacccagg ggatcaccaa tcatgtaata
     1081 gccaaatttg ggattggcca gggtctcggt catatagtcg gcaaccgaca gcggcccttc
     1141 agcggcaatg cgttttttca gatgatcgac cagctcattc attgagcgat attatacagt
     1201 ttttggcgtg cggaaaatca aatagagacc cagcagcacc agtggcaccg acaacaactg
     1261 ccccatggtg aaattgccga acaaaaagcc aatatgagca tcgggctggc ggaaaaattc
     1321 aacgaagcca cgcgccgccg catagccgat cataaagacg ccggaaagaa agcccgtctt
     1381 gaggcgccaa cgctcgtttt tggacagcac atacaatatg ataaatagca ctaagccttc
     1441 caatagagct tcgtaaagct ggcttggatg gcgcggtagc aaaccaccgt gcgggaacac
     1501 catcgcccaa ggcacattcg taacgcggcc aaacagctca ccattaatga aattggcgat
     1561 gcggccaaaa aacaagccga tcggcacggc gcaggcgacg gtatcgccga ccgcccaata
     1621 gtccagctgg cgctgacggc aaaacaacag gataacgacg atgacgccga tcaagccacc
     1681 atgaaatgac ataccgcccc gccagacctg aaaaatggct aaagggttcg atagataaaa
     1741 ctcagcatta taaaatccgg cataacccag ccggccaccc aagacaacgc cgagcgtaat
     1801 ccacaccaga aaatcatcga catttttgcg taccattgca tgcggcggct tactgacata
     1861 ccaagtaata tatttccacc caattagcag accagcgata aacgccagcg cataccagcg
     1921 cacggcaaat ggcccgatgg cgaagataac cggatcgatg ttgggaaagg cgagtgtgaa
     1981 tgtcatgcct gatcatctac ccgaaagtac cattgaggcc aaataaattc gtaaaaaact
     2041 tattgtgaac tccatttaat atctcccgga agacattatt attgttaacc attgggaatt
     2101 aggtaagctg tccccataat tatatgaggg acctttagtg acgtttcctg ataagccaat
     2161 tcgcatcatc ctgccgtttg gaccgccggg gttttccagt cgggttggtt ttgcccttgg
     2221 tccacatata gcggaaacgt taggccaaga gatcgtgttt gagcacatta ccggtgggca
     2281 aggtggcgct aacggaccac gcgctgcggc tgaagcagag ccggatggct attctctatt
     2341 gatgggcacc atcggcgata tcgccttatt gccgcatatc atgcctgaat acggtattga
     2401 cccgctcacc gacctaacgc caatcctcaa aatagccgac acgccaaata tattgatcgc
     2461 taacctatca ctcggtgtta ccactttgga tgatttaatc gccgccgcca aagccaatcc
     2521 tggctcgatc cgttaccacg ccattaatga gcgcagcatt caccggctcg aattcaaatc
     2581 ctttatcagc gaaactgaca ttgtcctcac cgaagtgcca ccaaaaggcg gttctgaggg
     2641 cgcgattgaa gccattttgg atggtgatat tgatttgacc atcaccaccg gcccgcgcct
     2701 gctggaaagc atccaagccg aagatgtttt tgctattgcc gccatctgcc ccgaacgtac
     2761 aaatgtttac ccctatgttc cgaccatgaa agagctggga ctgacatcaa ctgggtcagg
     2821 ctcgtggatg ggattgtttg ctcctgccgg tgtgccggaa gacattatgg aagcactgtt
     2881 taacgcggca cataaagcct gcaccgagcc cgatgttatt gctgttctaa ccgagcaggc
     2941 ggcaacggta aatcccagca cgtcaccggc agaagccctg acctttgttg aaagtgaaac
     3001 ggaaagattg cgccaagcct gtatggcggc gggttttgcc taacagtatg ggtcgtcggc
     3061 cgagaggtaa tcctgaacat agcgcttgac gccatcttcc agtgaggtcg agccagcatt
     3121 gtaaccagct gcccttaagc gagccatctt ggcttcggta aaatactgat atttgtcgcg
     3181 aatattttcc ggcgtcggga tgtagtcgat attgggctct ttgtccaaag ccgcaaaaac
     3241 cgctacggct aaatctttaa acgcccgcgc tttgccggtg ccgcaattaa acaggccact
     3301 aacaccgcga ttttcgtaga gccacaacat cacatcgaca caatcgccga cccagatgaa
     3361 atcccgcatc tggccgccat ctttatattc cggatgatgc gactgaaaca accgggcttt
     3421 gccggttt
//
LOCUS       DASCNL010000617         1540 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001267768, whole genome shotgun sequence.
ACCESSION   DASCNL010000617 DASCNL010000000
VERSION     DASCNL010000617.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001267768"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="QF359_08245"
     CDS             complement(<1..551)
                     /locus_tag="QF359_08245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation protein PaaY"
                     /protein_id="HJO86935.1"
                     /translation="MSGAQTSNSANSRLPELTVYAVNGIVPVVDPSTFVHPTAVLIGD
                     VIVGPNCFIGPNASLRGDFGRIVVGAGVNIQDSCCVHGSCNDTIVGDDAHIGHGAVIH
                     ACELKRNVLIGINSTIMDLAEIGESAIVTANAFVKIGDKVAPRTLVGGIPAKFIKELS
                     EQDLVKKVNGTSVYHQLVGRCHET"
     gene            complement(663..911)
                     /locus_tag="QF359_08250"
     CDS             complement(663..911)
                     /locus_tag="QF359_08250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86936.1"
                     /translation="MPLVACGSSKLTKWEYKEARLTLAGHPTLCLMIGSEPSALTPSG
                     KRLPSRNKARSVGIDHCSGEAIERQLWTFADPLNISNR"
     gene            complement(1005..>1540)
                     /locus_tag="QF359_08255"
     CDS             complement(1005..>1540)
                     /locus_tag="QF359_08255"
                     /inference="COORDINATES: protein motif:HMM:NF013033.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004800 - thyroxine 5'-deiodinase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="deiodinase-like protein"
                     /protein_id="HJO86937.1"
                     /translation="TGSLTCPMYVKNVRKFIKLKDKYPDVEWLMIYVREAHPGEKIGQ
                     AGTIDKKVAYAKQNRDDYHEERKIFVDSVDGKWHHDWGLLPNMVYVINPEGTVTYRAD
                     WSFANNVDRVLKNRDDIITNEHIVIVGAAPWITIPVTLKGGWIALYDILIIFPKVYYE
                     HLKLDIQTWWGRRKAKK"
BASE COUNT          392 a          393 c          336 g          419 t
ORIGIN      
        1 gtttcgtggc agcgtcctac caactgatga taaacgctgg tgccgttgac ttttttaacc
       61 aaatcctgct cggaaagttc cttgataaat ttcgctggta tcccaccaac caaagtacgg
      121 ggcgcgactt tgtcaccgat cttgacgaaa gcattggcgg taacgatggc gctttcaccg
      181 atttccgcta aatccattat cgttgaattt atgccaatca acacattgcg tttaagctca
      241 caagcatgaa tgacagcgcc gtggccaata tgggcatcgt ctccaacgat ggtatcgtta
      301 caactaccgt gaacacagca actatcttga atgtttacac ctgcgccaac aacgatccgg
      361 ccaaaatcac cgcgaagtga tgcattgggg ccgataaaac aattaggtcc gacgataaca
      421 tcgccgatca gcactgccgt cggatggaca aaagtcgacg gatcgactac cggcacgatg
      481 ccgttgacgg cataaaccgt cagctccggt agccgtgaat tagcggaatt agatgtctgg
      541 gcgccactca taggattacc tttttttgtt agttaaaatt agctgactgg taatatcctg
      601 atgcagcact tgtttcaata acgatgatta cgccatcacc ctctatttgc ctttgggtga
      661 catcagcggt tgctaatatt tagcggatcg gcaaaggtcc agagctggcg ctcaatcgcc
      721 tcacctgaac agtgatcgat acccaccgag cgcgccttat tgcgcgacgg caaacgtttt
      781 ccgctaggcg ttaaagcgga aggctctgat ccaatcatca ggcacaaagt cggatgccca
      841 gccaaagtga gccgcgcctc tttatattcc catttcgtta attttgacga cccgcaggca
      901 accaagggca ttgttagaat aaaatcacct ttgacccact agggaatgct ttaacttctt
      961 tcccccaaaa aattacaaag ttgttattcc actgctcgcc caaactactt ttttgcctta
     1021 cgtctgcccc accaagtttg gatatcaagc ttcaagtgct cgtaatagac cttgggaaat
     1081 ataattagga tatcgtacag agcaatccaa ccgcctttta gcgtgaccgg gatcgtaatc
     1141 cagggagccg cgccgacaat gacaatatgc tcgttggtga tgatatcatc tctgttttta
     1201 agtacccgat caacattgtt ggcgaaagac cagtctgcgc ggtaggtcac cgttccctcc
     1261 ggattgatta cataaaccat atttggaagt aggccccaat catggtgcca tttgccgtcg
     1321 acggaatcga cgaaaatttt tcgttcttca tgatagtcgt ctcggttttg tttggcgtac
     1381 gcaacctttt tatcgattgt tccggcttga cctattttct cgccagggtg cgcttctcgg
     1441 acatagatca tcagccattc gacatccgga tacttatcct taagtttgat aaattttctg
     1501 acgttcttta catacatggg acatgttagg ctacccgtct
//
LOCUS       DASCNL010000618         1171 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001271599, whole genome shotgun sequence.
ACCESSION   DASCNL010000618 DASCNL010000000
VERSION     DASCNL010000618.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1171)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1171)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001271599"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..941
                     /locus_tag="QF359_08260"
     CDS             <1..941
                     /locus_tag="QF359_08260"
                     /inference="COORDINATES: protein motif:HMM:NF020119.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HJO86938.1"
                     /translation="LSAANWGGQGLHSRGNFEGYFRAASENKWLEVHGIEHWTEFYTD
                     YGVSLQKRFFDHFLKGKNNGWGEQPKVQLQVRHPDRFEQRFEQDWPIPRTQWSEFYLD
                     PSNMSLTATPPSDAQDISYDATGNGVTFLSEPLSEVTEIIGPSAVKISVSSSTEDADI
                     FAVLRVFDEHGKEIIFQGAIDPHTPIGQGWLRASHRKIDEELSLPYRPYHSHDEKWPL
                     TPGEVVDLDIEIWPTSIVVPAGYRIGLTLRGNDYEYEGESGGYLSNFKNELKGCGPFL
                     HDDPRDRPLEIFGGTTTLHIDTEQPGYLLLPIIPPG"
BASE COUNT          303 a          284 c          297 g          287 t
ORIGIN      
        1 tgctgtcagc cgccaattgg ggtggtcagg gtctacactc gcgcggcaat ttcgagggct
       61 atttccgggc ggcgtcggaa aataaatggc tggaagttca tggcattgag cattggacgg
      121 agttctatac ggattacggt gtaagtttgc aaaaacgctt ctttgatcac tttctaaaag
      181 gcaaaaataa tggctgggga gaacagccaa aagtccagtt gcaagttcgc catcccgatc
      241 gctttgaaca acgcttcgag caagactggc cgatcccgcg cacccaatgg tcagagtttt
      301 atcttgaccc aagtaatatg tctttgacgg ccacaccgcc ctcagacgcg caagatatta
      361 gctatgatgc gaccggcaat ggcgtgactt tcttaagcga gccgttgagc gaagtaaccg
      421 agatcatcgg gccgtcggcg gtaaaaatca gcgtctcatc ctccaccgaa gatgccgata
      481 tttttgccgt gctgagggtg tttgacgagc acggcaaaga aattattttc caaggcgcga
      541 ttgatccaca tacgccgatt gggcaaggct ggctccgtgc ctcgcaccgt aaaatcgacg
      601 aagagctttc cttgccgtat cgcccctatc atagccatga tgaaaaatgg ccgctgacgc
      661 cgggcgaagt cgtcgatttg gatattgaga tttggccaac ctcaattgtc gtaccggcgg
      721 gctaccggat tggtctgacg ttgcggggta acgactatga gtatgaaggc gaaagcggtg
      781 gttatctttc caattttaaa aatgagctta aaggctgtgg accatttttg catgatgatc
      841 cacgcgaccg gcctctagaa attttcggcg gcacaacaac actgcatatt gataccgaac
      901 aaccgggcta tctattactg ccgatcattc caccgggcta aatcccgcaa ttatgtctgg
      961 gactcttttt agtttccgat ttaagctgtc tgtgatctga ccaaacgcag tgaggggaat
     1021 acaatatggc cgaaatcggc accgatctcg aaaaaaatat tgaaacagct aacgcaccag
     1081 aggatgatca gcgctgcact ttcgatgtcg tcatcaaggc aaatgctaaa actgcctgta
     1141 ccgcgcgtaa tgaagttacc attcattctt t
//
LOCUS       DASCNL010000619         1489 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001272613, whole genome shotgun sequence.
ACCESSION   DASCNL010000619 DASCNL010000000
VERSION     DASCNL010000619.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1489)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1489)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1489
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001272613"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="QF359_08265"
     CDS             complement(<1..208)
                     /locus_tag="QF359_08265"
                     /inference="COORDINATES: protein motif:HMM:NF036807.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HJO86939.1"
                     /translation="MGLAVIGAGFGRTGTESMKTALEILGLGPCQHMKVLLADPKQEA
                     YWRKVLQDEQQGKLPNWDEAYAEYN"
     gene            complement(423..647)
                     /locus_tag="QF359_08270"
     CDS             complement(423..647)
                     /locus_tag="QF359_08270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86940.1"
                     /translation="MKKLTNGVQSQNLSHCQPPKRIGSHLLKKFQIFPVFSFVFEMAD
                     KNAVNIGINQVIAGHVNKTQISQAPEISQL"
     gene            complement(773..>1489)
                     /locus_tag="QF359_08275"
     CDS             complement(773..>1489)
                     /locus_tag="QF359_08275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HJO86941.1"
                     /translation="PFYYGCTGPHTQATIDYVAHAAKEGADGAIIAAPAYICASNEDI
                     VQYFLEVADASDIPIGIYNNPPRVKTDLTTADIVRLAEHPNIVVNKESTTRVGQVAQL
                     CAAKPDLSLMCCCSPNLGLVVPLMALGGHGTANMTGNIIPQEMAVISKPWRDDGDAFN
                     CRETWLKNLPMLHFAYSETNPVAVKSLMRAVDMPAGALRRPLQPLNPQALQVGLDIVR
                     NLELDKKYGYSLKPVLAAAE"
BASE COUNT          371 a          354 c          360 g          404 t
ORIGIN      
        1 agttatactc ggcatatgct tcatcccagt ttggcagttt gccttgttgt tcatcctgca
       61 ggactttgcg ccaataagcc tcttgctttg ggtccgccaa gaggactttc atatgctgac
      121 acggaccgag cccaagaatt tcgagggcag tcttcatcga ctctgttccg gtgcggccga
      181 aaccggcacc aatcactgct agacccatac tcaccacctc cctcgttaaa atgtattttt
      241 taccagcagc aattatacat aatttttgcc gcatcaaaag ccatcctcaa ttacctttgg
      301 cagttaatta tcattctaac caaattgccg gcattaatag cttcaatgct aatttgacaa
      361 tcctgtatac aaaataagcg ctggaaattt attttctgca tacccttata tgattgatta
      421 tattacaact gtgaaatttc aggtgcttgg gaaatttggg ttttgtttac atgacctgcg
      481 attacttgat tgataccgat attaactgcg tttttgtcag ccatttcaaa aacgaagcta
      541 aaaacaggaa aaatctggaa tttttttaac aaatggctgc caattctctt gggtggttgg
      601 cagtgcgaaa gattttggct ttgcacaccg ttggtcagtt tcttcacaat ttggctctca
      661 cgtcgaaagg aagcctttct gggaaatgag ttgggcggtg gcttggtttg ggttacctga
      721 agaatatcta gtcgaatatc cgaatttaga aaaagtttgc agttgagctc tcttattccg
      781 ctgccgccag aaccggtttc agcgaatagc cgtatttttt atcaagctct agattacgga
      841 caatatctaa gccaacctgc agggcctgag ggttcaaagg ctgcagtgga cgcctgaggg
      901 cgccggcagg catgtcaaca gctcgcatca gggattttac cgccaccgga ttagtctctg
      961 aataggcgaa atgcagcatc ggcaagtttt taagccaagt ctcgcggcag ttaaaagcat
     1021 cgccgtcatc ccgccagggc ttggaaataa cggccatttc ctgcgggata atattgcctg
     1081 tcatattcgc cgtgccatgt ccgccgaggg ccattaacgg caccaccagg ccgaggttgg
     1141 gggaacagca acacatcagc gacagatccg gcttggccgc gcacagttga gccacctgac
     1201 cgacccgggt tgtcgattcc ttattgacga cgatgttggg atgttcagca agacggacga
     1261 tatcagccgt cgtcagatcg gttttcactc gcggcgggtt gttgtaaatg ccaatcggaa
     1321 tatcgctggc atcggcgact tccagaaaat actgcacgat atcttcgttg gaggcgcaga
     1381 tataggccgg ggcagcgata atggcaccgt cggcaccttc cttagcggca tgggctacat
     1441 aatcaatagt tgcttgggta tgcgggccgg tgcagccgta ataaaaagg
//
LOCUS       DASCNL010000620         2121 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001273268, whole genome shotgun sequence.
ACCESSION   DASCNL010000620 DASCNL010000000
VERSION     DASCNL010000620.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2121)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2121)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2121
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001273268"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            290..1042
                     /locus_tag="QF359_08280"
     CDS             290..1042
                     /locus_tag="QF359_08280"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJO86942.1"
                     /translation="MFDLTHQDNVSILTLCHPPANAISHAWLEEFDRILDQLEDNGQT
                     NILHIRSDQKIFCGGADLKEYRKRMEANESPEEYKKYLQTFHRLFSRLEKLAKLSIAE
                     IGGAALGGGFELAMSCDLRAAAHEAKLGLPEGRLGLIPGAGGTQRITHLCGPSVANRI
                     ILACEIVGGETALQLGMVQWAAPRDELAAVTQTIIDGCRELSSDALHAAKKCIAAAQD
                     PTVDGFKMEIDVSLELVQNPNSIKRVIEFFDK"
     gene            complement(1210..1770)
                     /locus_tag="QF359_08285"
     CDS             complement(1210..1770)
                     /locus_tag="QF359_08285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86943.1"
                     /translation="MFDRFNVRILPPVFAAFLLTACTFDQGIALSPSEPDTDKDGLPQ
                     VTQATFAQFQDIPIPGNAKMNMDRTLILGEKEAWIGRLVIESRTPQVKLFDFFKHRMG
                     QFGWQEITSVRSATSVLSYSKDNRIMTIQIKSHRFIGTQVNITMSPKGAPTPPPVTNA
                     SFPNDTLTKSDKTVINPASLRPVEVR"
BASE COUNT          544 a          483 c          549 g          545 t
ORIGIN      
        1 cgaaaaaaca agttccggtt tttccggcgt tccttcaacg cggacagaat tcattctttc
       61 ctcccttaac tttcccttgg tcaagatcga agcgccggag caacatagcc aatttcgaaa
      121 ttcagtaatg cggtgtttat aatgtgctgt ttatacaggc aaccggtaaa tgtggtacat
      181 gactgaaatc aaggccggct tttgttaggc caatatattg gttataagaa aacaccaacg
      241 ctggctagtc tttaataagt gcttaattta atttaccggg aaggcaaaaa tgtttgattt
      301 aacgcaccag gacaatgttt ctattttgac tctatgtcat cctccagcca acgcgatcag
      361 ccatgcttgg ctagaagaat ttgaccggat tctggatcag ctcgaggata acggccagac
      421 caatatcttg catattcgca gcgaccaaaa aatcttctgt ggcggtgctg accttaaaga
      481 ataccggaag cgcatggaag ccaacgaaag cccagaagag tataaaaaat atctgcaaac
      541 cttccaccgc ttattcagtc ggctcgaaaa gctggccaag ctgagcattg ctgaaatcgg
      601 tggtgcggcg ctcggcggcg ggtttgaact ggcgatgtcg tgcgatctcc gggccgctgc
      661 tcatgaagct aagctcggtc tgcccgaagg ccggctcggc ttaatacctg gggccggcgg
      721 cacccagcga attacccatt tgtgcgggcc cagcgtcgct aaccggatta tcctggcttg
      781 tgaaattgtc ggtggcgaga ccgccttgca gctcggcatg gtgcaatggg ccgccccccg
      841 ggatgagctt gcggcagtga cgcaaacgat aattgatggt tgccgggaac tttcctcaga
      901 tgctctgcac gcagccaaaa aatgcatcgc cgctgcccaa gacccaacgg tggacggttt
      961 taagatggaa atcgatgtaa gccttgagct cgtgcaaaac cccaattcga tcaagcgcgt
     1021 catcgagttt tttgacaagt aggtgattgt tagaattaag gagacagttt acttaattcc
     1081 cgcgcatgcc gagagggttg gaaaacttgg tttatatact ctccgtctta accgggcttg
     1141 attagggtat ccagttttca actcaactct caaatttagg ggaaggttag gtagggtgac
     1201 gagtagaaac tacctcacct caaccggtcg caaagacgcg ggattgatca ctgtcttgtc
     1261 ggatttagtc agggtgtcgt ttgggaagga ggcatttgtc accggcgggg gtgttggggc
     1321 gccttttggt gacatggtga tattaacctg agtgccgata aaccggtggg atttaatttg
     1381 aatggtcata atgcggttgt ctttggagta gctcagcacg gaggtcgccg aacgcaccga
     1441 agtgatttcc tgccagccga actggcccat ccgatgttta aagaaatcaa aaagttttac
     1501 ctgcggggtg cggctctcga tcacgaggcg gccgatccag gcctcttttt cgcccaatat
     1561 taaggtgcgg tccatattca tctttgcatt gcccggaatt gggatatcct gaaactgagc
     1621 aaaggttgct tgggtcacct ggggcaagcc gtctttatcg gtgtccggtt cactcggcga
     1681 taaggcgatg ccctggtcaa acgtacacgc tgtcagcaga aaagcagcga aaacgggggg
     1741 caaaatccgc acattaaagc ggtcaaacat tggattcctc atacagcaaa tataattatt
     1801 caatctttgc ctagtatatg gcataaacct tactgaaata taaaagaaat ttgcatctaa
     1861 taatggcgga atccagggat ttgtcctcaa tttaagccgc cgtgtgaaat ttttttgaaa
     1921 aaaatgtatt ttgtcgtttg acattagtag gaggtaggcc taaaacccgt cctcaccggc
     1981 gcgggcaacc gctttggtcg tccacaaaga aacgacatgg cgacagccct aataaagggg
     2041 tagttgttcg tgtcactttt ttgctgagta aaatcagcgt ttttatgggc ctgctcttga
     2101 acattgttga tatggaaagg g
//
LOCUS       DASCNL010000621         1495 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001276318, whole genome shotgun sequence.
ACCESSION   DASCNL010000621 DASCNL010000000
VERSION     DASCNL010000621.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1495)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1495)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1495
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001276318"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            302..>1495
                     /locus_tag="QF359_08290"
     CDS             302..>1495
                     /locus_tag="QF359_08290"
                     /inference="COORDINATES: protein motif:HMM:NF013117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HJO86944.1"
                     /translation="MQKLFDPQYIEAQLLALKDWVFSEILVLSSLGQLIFIVLAFLAA
                     WAARPLITSWINKLAEWKEADFWVTKLAEALALMALPFVWIVLQWISSLVAAFASWPH
                     HLLTVTVSLLTAWIIIRLTATLIRDKTWSKLISITAWTIAALNILNLLDATVAFLDSL
                     SMDLGELHVSALTIIKGMMALAVLLWLAQFASRKLEQRVSKLPNMTPSVQVLLIKLFK
                     IFVITIAVVAAMNSVGIDLTGLAVFSGAVGVGIGFGLQKIFANLISGLLILADKSIKP
                     GDVIEVAGTYGWVNTLGGRYASVITRDGVEHLIPNEELINQRVSNWTFSDTEIRIKLP
                     IGVAYDSDLPHAIETCIKTAQAEGRILTSPEPTCLVKGFGDSAIDLELRIWIRDPHNG
                     IANIKS"
BASE COUNT          345 a          362 c          367 g          421 t
ORIGIN      
        1 cgcctgatga ttttagtctt cctgccgggt ttggtgatgt tgctgccgaa tttgctttac
       61 cgataaataa atactggtca tctgaaatga cacaatttgg tctagattgt ggcgttttct
      121 tattgtgatg aagatgtgcc agaaaaaatt aacgattcgc gacaaactat tggcaacctc
      181 ttgaaattca agctacaaac ttaaattaat aaagaggctg accatttctc aaaccgttaa
      241 cggctctttc attggtttct gcgagtatta tgcagcaagt ttgattgctg catgagggat
      301 aatgcagaaa ctatttgatc cacaatatat tgaagctcaa ttgctggcgc ttaaagactg
      361 ggttttcagc gaaatcctgg tgctgagcag ccttggccaa ttgatcttta ttgtcctggc
      421 ttttttggca gcctgggcag cccggccgct tatcacctcc tggatcaata agctcgccga
      481 atggaaagaa gctgacttct gggtcactaa gcttgccgaa gccttggctc tgatggcgct
      541 gccctttgtc tggatcgtgt tgcaatggat ttcgtctctg gtcgccgctt ttgccagctg
      601 gccacatcat ttgcttacgg taaccgtcag cttattgacg gcttggataa tcatccgcct
      661 gaccgccaca ttaatccggg acaaaacctg gtccaagctg atctcaataa ctgcctggac
      721 catagcggcg ctgaatattc tcaatctatt ggatgccacc gtcgctttcc tcgacagttt
      781 gtcgatggat cttggcgagt tgcatgtttc ggcgctgacc atcatcaagg gcatgatggc
      841 cttggctgta ctgctgtggc ttgcccaatt tgcctcacgt aaactcgaac agcgggtcag
      901 caaattaccc aacatgacac cgtcagtgca ggtgttgctg attaagctgt ttaagatatt
      961 cgttatcacc atcgccgttg ttgccgccat gaacagcgtc ggtatcgatc tcacaggcct
     1021 tgcggttttc tctggtgcgg ttggtgtcgg tattggtttc ggtctgcaaa aaatcttcgc
     1081 caatctcatc agcggcctgc tcattctcgc cgacaaatcg atcaaaccgg gcgatgtgat
     1141 tgaggttgcc ggcacttatg gctgggtgaa tactcttggc ggccgttacg cttcagtgat
     1201 cactcgcgac ggtgtcgaac atctgatccc gaatgaagag ttgattaacc agcgggtctc
     1261 caactggact tttagtgata ccgaaattcg catcaaactg ccgattggcg tggcttatga
     1321 ctccgacctg ccgcatgcga tagagacctg cattaagacg gcgcaagctg aaggccgtat
     1381 cctcacctca ccggaaccca cctgtctggt taaaggattt ggcgacagtg cgattgattt
     1441 ggaactgcgg atttggatca gagacccgca taacggtatc gcgaacataa aaagt
//
LOCUS       DASCNL010000622         2856 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001277767, whole genome shotgun sequence.
ACCESSION   DASCNL010000622 DASCNL010000000
VERSION     DASCNL010000622.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001277767"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="QF359_08295"
     CDS             <1..412
                     /locus_tag="QF359_08295"
                     /EC_number="5.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HJO86945.1"
                     /translation="EAAQAAGLIAVVCVGETETERDKGITIDVVAAQIAGSVPPDSNA
                     GNVVVAYEPVWAIGTGRTPTSDEVQDVHAMMRGKILELLGADEAASIHLLYGGSVKPS
                     NAVELLGLPDVDGALVGGASLSHDDFWAIAEACS"
     gene            632..973
                     /gene="secG"
                     /locus_tag="QF359_08300"
     CDS             632..973
                     /gene="secG"
                     /locus_tag="QF359_08300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HJO86946.1"
                     /translation="METVIIVIHLLLAIAMIFLVLIQQSEGGLGGMGGGASGGGMGGF
                     MTGRATANLLTRSTGILATAFFVTSMALAILADQGREKGSILDQPAKPANQTQTPATP
                     SVPSVPTVPGK"
     gene            1071..2702
                     /locus_tag="QF359_08305"
     CDS             1071..2702
                     /locus_tag="QF359_08305"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HJO86947.1"
                     /translation="MTRFIFITGGVVSSLGKGLASAALASLLQARGFKVRIRKLDPYI
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTCVDAKQSDNVTTGRIYSDVIAKE
                     RRGEYLGATIQVIPHITDAIKNFTVSDLDDEDFVLVEIGGTVGDIEGLPFLEAIRQLG
                     NELGRKNTMYIHLTLLPYIAAAGELKTKPTQHSVKELLNVGIQADLLLCRADREISDG
                     ERRKVASFCNVREEAVVPALDVKSIYQVPISYHEQGLDDEVCRHFGIDSKAPKLDAWQ
                     DVVQRATAPEGDVTIAVVGKYTGLLDAYKSLAEALAHGGIANNVKVNLKWLESEIFET
                     DDTDTLHQLEDCHGILVPGGFGERGAEGKIQAAKFARERDVPYFGICFGMQMAVVEAA
                     RNLAGLENAGTTEFGPCDEAVVGLMTEWEKDGIVEQRDEASDKGGTMRLGAYPCTLAN
                     HSRVKQIYAQTDINERHRHRYEVNMAYESQLADKRMIFSGKSPDGILPEIVEITDHPW
                     FIGVQFHPELKSRPFEPHPLFTDFIRAAVEQSRLV"
     gene            2708..>2856
                     /locus_tag="QF359_08310"
     CDS             2708..>2856
                     /locus_tag="QF359_08310"
                     /inference="COORDINATES: protein motif:HMM:NF012991.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HJO86948.1"
                     /translation="MSLNNVKIGPYTVGNDQKITIIAGPCAMESRDHALEMATVLKEI
                     AEQFK"
BASE COUNT          726 a          674 c          767 g          689 t
ORIGIN      
        1 cgaagctgcc caggctgccg gcctaatcgc cgtcgtctgt gtcggcgaaa ccgaaaccga
       61 acgtgacaaa ggcataacaa tagatgtcgt tgcggcgcaa attgccggct ccgttccacc
      121 agactccaac gcgggcaatg ttgtagttgc ctatgagccg gtctgggcaa ttggtaccgg
      181 ccgcacgccg actagtgacg aagttcagga tgttcacgcg atgatgcgcg gtaaaatttt
      241 agaactgctg ggtgctgatg aggcggcgag tatacacctg ctgtatggcg gctcggttaa
      301 acccagtaat gccgtcgaac tgttaggttt gccggatgtt gatggcgctt tagtaggtgg
      361 cgcgagcctg tcccacgatg atttttgggc gattgcggag gcctgctcct aataaaatat
      421 atcgctaact atttcggtga cagtttactt tttaaaaaat cgctcacagt ttacggcacc
      481 aataaaaaag taaattgtca ccgacataaa atctaatttg ccaaatccct ccgaaacata
      541 tacaaggcgc ctaaatttta aagataaaga ttgcttcgca ggcttttgaa cttatatgaa
      601 ggcaagaatt tagcggaaac ggaataaagt aatggaaacg gtaattatcg ttattcactt
      661 gttgttggcg attgccatga ttttcctggt gttgatccag caaagcgaag gcggacttgg
      721 cggcatgggc ggaggcgcat ccggtggtgg catgggtggc tttatgaccg gccgggcgac
      781 ggcaaatctg ctgacgcgct caaccggaat attagcgacg gcgttttttg tcacctcaat
      841 ggcgctcgca atattggcgg atcaaggccg cgagaagggt tcgatcttgg atcagccggc
      901 caaaccggcg aatcaaaccc aaactccggc gacgccgtct gtcccaagcg ttccgactgt
      961 gccgggcaag tgataaaaga tactttaaat ataaagagtt acgaagaggc ggcagaagtg
     1021 ccgcctcttt tggtttcacc cctagagttg ataatataga gtatcggtcc atgacgcgtt
     1081 ttatatttat caccggcggc gtggtttcct cattgggaaa aggcttggcc tcggcggccc
     1141 tcgcttcact ccttcaagcc cgcggcttca aggttcgtat cagaaaacta gacccttata
     1201 tcaatgttga tcccggcacg atgagcccgt atcagcatgg cgaagtcttt gtcaccgatg
     1261 acggggcaga gactgatctc gatcttggtc attatgagcg ttttacctgt gttgacgcca
     1321 aacaaagcga caatgtaaca accgggcgta tttattccga tgtcatcgcc aaagaacgcc
     1381 gcggcgaata tctcggcgcc actattcaag tcatcccgca tattaccgat gcaattaaga
     1441 atttcacagt ttcagatctc gatgacgaag attttgtcct ggttgaaatc ggcggcacgg
     1501 tgggcgatat cgaaggactg ccgttcctcg aagccatccg gcagctcggc aatgaattgg
     1561 gccggaaaaa caccatgtac attcatttga cgttgctgcc ctatatcgct gcggcgggtg
     1621 agcttaaaac caaaccgaca caacactcgg tcaaagagtt gctgaatgtc ggaattcagg
     1681 cggatttact tctgtgccgg gcagatcggg aaatttcgga tggcgagcgc cgcaaggtag
     1741 cttctttttg taacgtacgg gaagaggccg tggtaccggc cttggacgtt aaatcaatct
     1801 atcaggtacc gatcagctat cacgagcagg ggctcgatga tgaagtctgt cgtcatttcg
     1861 gcattgattc taaagcaccc aaactcgatg cctggcaaga cgtggtgcag cgcgctactg
     1921 caccagaagg cgacgtcacc attgctgtgg tcggtaaata taccgggctc ctggacgctt
     1981 ataaatcgtt ggctgaagcg ctcgctcatg gcggcattgc caacaatgtt aaagtgaacc
     2041 tgaaatggct ggaatctgag atttttgaga ctgatgacac agatacgctg caccaactgg
     2101 aagactgcca cggtattctc gttcccggcg gtttcggcga acgcggtgct gagggtaaaa
     2161 ttcaggcggc taaattcgcc cgcgaacgcg atgtaccgta tttcggaatt tgctttggta
     2221 tgcagatggc ggtggttgaa gcggcgcgca atctcgctgg gcttgaaaat gccggaacga
     2281 cagaatttgg cccttgtgat gaggcggtcg ttggtcttat gacagaatgg gagaaagacg
     2341 gtattgtcga gcagcgcgac gaggcaagtg acaagggcgg caccatgcgc ctcggtgctt
     2401 atccttgtac cctagccaac cacagccggg tcaaacaaat ctacgcgcaa acggatatta
     2461 atgaacgcca ccgccatcgc tatgaagtca atatggctta tgaatctcaa ctggctgata
     2521 aaaggatgat cttttccggt aagtcgcccg atggaatttt accggaaata gtcgaaatta
     2581 ccgaccatcc gtggtttatt ggtgtgcagt ttcaccctga gttgaaatcc cggccgtttg
     2641 aaccacatcc gttatttacg gattttatcc gtgccgcggt agagcagtcg agattggtat
     2701 agagaatatg agcctaaata acgtaaaaat cggcccatat acggtcggta atgaccagaa
     2761 aataactatt atcgccggtc catgtgcgat ggaaagccgt gatcatgcac tggaaatggc
     2821 tactgtgctc aaggaaatcg ccgaacaatt taaaat
//
LOCUS       DASCNL010000623         1494 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001280982, whole genome shotgun sequence.
ACCESSION   DASCNL010000623 DASCNL010000000
VERSION     DASCNL010000623.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1494)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1494)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001280982"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="QF359_08315"
     CDS             <1..337
                     /locus_tag="QF359_08315"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86949.1"
                     /translation="LEQRRHQLSGTLSGGEQQMLAVARGLMARPRLLMLDEPTLGLAP
                     LIAEAIFEMMSQLKATGLTLLIVEQDVTRTLQIADYAYVLENGAGVMAGDARGILADP
                     KVRESYLGI"
     gene            complement(354..1226)
                     /locus_tag="QF359_08320"
     CDS             complement(354..1226)
                     /locus_tag="QF359_08320"
                     /inference="COORDINATES: protein motif:HMM:NF019474.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO86950.1"
                     /translation="MERNNILIYLNYTQAELDAQYNQATLVPDLSPYMEHWTKASAEA
                     RATLECNLDVAYGPGEVELLDIFSSKQERTPIHVHLHGGAWRRIGKEHVSYHAPPFVD
                     AGAIFIALNFGLAPRYTLDEIIDQIRKAIKWIWENANTFNGDRDRIFLSGVSSGAHLA
                     ANILADGWRSSYGLPEDVIKGAVLASGPYDLEPVRLSARNEYLKLDQASADRSNPLKH
                     IPASGPPIFVCWGDGELDEFRRQGEAFAQAWQAAGNDCQMLKIENCNHFDVGTLFGQA
                     DSAIIKAALAQMSI"
     gene            complement(1256..>1494)
                     /locus_tag="QF359_08325"
     CDS             complement(1256..>1494)
                     /locus_tag="QF359_08325"
                     /inference="COORDINATES: protein motif:HMM:NF024247.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO86951.1"
                     /translation="FCQSCKICINACPPDAITEEKQLVRGDTKWYTDFDKCIYYFNEN
                     KSCAICLAVCPWSKPGTAPKLSEKMLRKRQKVDV"
BASE COUNT          373 a          375 c          371 g          375 t
ORIGIN      
        1 acttgaacag cggcggcatc agctgagcgg cactttatcg ggcggtgagc agcaaatgct
       61 ggcagtggcg cgtggcctga tggcccgtcc ccgtctgtta atgctcgatg agccgactct
      121 gggattggca ccgctaatcg ccgaggcaat tttcgagatg atgtcgcagc ttaaagcaac
      181 cggtctaacg ctgcttattg tcgagcagga tgtaacccgg accttgcaga ttgccgatta
      241 tgcttatgtg cttgaaaacg gcgccggcgt catggccgga gatgcccggg gcatactggc
      301 tgatccaaaa gtccgcgaga gttatttggg catctgagat tataattttg tactcagatg
      361 gacatctgcg ccagcgccgc tttaataata gcgctgtcgg cctggccaaa taaggtaccg
      421 acatcgaagt gattgcagtt ttcgattttg agcatttggc agtcgttgcc cgccgcctgc
      481 caagcttgag caaaggcctc gccttgccgc cgaaactcat caagttcgcc atcgccccag
      541 cagacaaaaa tcggcggtcc agaagccggg atatgtttta aaggattgct ccggtccgcc
      601 gacgcttgat ccagttttaa atactcattt ctggcactca atcggacggg ttctaaatca
      661 taaggaccac tcgccaagac ggctccttta atcacatctt caggcaaacc gtatgaggat
      721 cgccagccat cagctagaat gttcgctgcg agatgagcac ctgatgacac gccggataaa
      781 aagatccgat cccgatcacc gttaaaggtg ttggcatttt cccaaatcca ttttatcgcc
      841 ttacgaattt gatcgatgat ttcgtccaag gtatatcgcg gcgccaagcc aaaattcaaa
      901 gcgataaaga ttgcgccagc atcgacaaat ggtggagcat ggtaagaaac atgttcttta
      961 ccaatgcgac gccaagcacc accatgaagg tggacatgaa tgggtgtccg ctcttgcttg
     1021 ctggagaaaa tatccaatag ttcaacttcg ccagggccat aggcgacatc caaattacac
     1081 tctagtgtcg cccgcgcttc ggcactcgct ttggtccaat gctccatata aggtgacaaa
     1141 tccggcacca atgtcgcttg attatattgg gcatcaagct ctgcttgggt atagtttaaa
     1201 taaatcagaa tattattcct ttccatcgcc caacagtgga acgcggggct taaaattaaa
     1261 catccacctt ctgccgttta cgtaacattt tttcagataa tttgggtgcc gtaccgggtt
     1321 tgctccaggg gcagacggcg agacagatag cacaactttt attttcattg aaatagtaaa
     1381 tgcatttatc gaagtcggtg taccatttgg tatcaccccg gaccaactgc ttttcctcgg
     1441 tgatggcgtc gggcggacaa gcgttgatgc agattttgca gctttggcaa aaat
//
LOCUS       DASCNL010000624         1203 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001281269, whole genome shotgun sequence.
ACCESSION   DASCNL010000624 DASCNL010000000
VERSION     DASCNL010000624.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001281269"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(74..694)
                     /locus_tag="QF359_08330"
     CDS             complement(74..694)
                     /locus_tag="QF359_08330"
                     /inference="COORDINATES: protein motif:HMM:NF021363.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HJO86952.1"
                     /translation="MFNRREKPPFFSRCCNLLWPRMGWARTGNYWAHRVSRLPGSVYS
                     IAAGFACGAAISFTPFVGLHILIGGLWAWLIRSNIIASVIGTVIGNPWTFPFIWVWIY
                     NLGVWLGFDSVEEHEKDLDFAALFGNAKQAALKFDLTFLAESVWPIFGPMLLGAIPTV
                     IVTWFLFYFAIKHVIKTYRHSRVERVKHKQHETGIEVKTPIEYSDE"
     gene            complement(766..>1203)
                     /locus_tag="QF359_08335"
     CDS             complement(766..>1203)
                     /locus_tag="QF359_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HJO86953.1"
                     /translation="IKGLIPGMALHFAGCCHALPGDRIVGIVTKGRGITIHTIDCEIL
                     EEFADTPERWVDVAWEEDANSELRAGRVEIVVTNEPGSLGELSMVIAKNDGNINNLKI
                     TNRSPEFFDMSVDIEVQDIKHLRNIIAALRASPVINSVERARG"
BASE COUNT          338 a          306 c          261 g          298 t
ORIGIN      
        1 cctggcgtta cggatggttg ctacgtgatc gatattaacg ccgaggcgaa gataatcggt
       61 aaaatcttgt tggttattca tcactgtact caatcggtgt ttttacttct attccggttt
      121 cgtgctgctt atgtttaact cgttcaacgc gggaatggcg ataggtttta ataacgtgtt
      181 taatcgcaaa atagaacaag aaccaagtaa caattaccgt cggtatggca cccaataaca
      241 tcgggccaaa aataggccat acggattccg ctaaaaaagt gagatcaaat tttagcgctg
      301 cctgtttggc attgccaaat agcgcagcga aatccaaatc cttttcgtgc tcctcaacgc
      361 tgtcaaaacc caaccagacc ccaagattgt aaatccagac ccagataaac ggaaaggtcc
      421 atggattacc gatcaccgta ccaatgaccg aagcaataat gttggatcgt atcagccacg
      481 cccacagccc tcctataaga atatgcagac cgacaaatgg cgtaaaggat atagcggccc
      541 cacaagcaaa tcctgcggca atagaataaa ctgaacccgg caggcggctg acccggtgcg
      601 cccagtagtt accggtgcgc gcccaaccca tccgtggcca caagagattg cagcagcggc
      661 taaaaaaggg aggtttttct cggcggttaa acatcggggt ccagttctac caaagatttc
      721 tcgtcacaat tacaacaact taattacttt tagtttaatc acaatctacc ccctggcgcg
      781 ttcaacagaa ttaattactg gcgatgcgcg caatgcagcg ataatattcc gcaaatgttt
      841 tatatcttgg acttcaatat ccaccgacat atcgaaaaat tctggactcc gattggttat
      901 ttttaaatta ttaatattgc catcgttttt ggcgattacc attgataatt cacccaaact
      961 gccgggctca ttggtaacga cgatttcgac ccggcccgcc cggagttcac tattagcgtc
     1021 ttcttcccag gcgacatcaa cccagcgttc aggcgtgtca gcaaattctt ccaaaatctc
     1081 gcaatcgata gtgtggatgg tgatacctcg gcctttggta acaatgccga cgatgcggtc
     1141 gcccggtagc gcatggcagc aaccggcaaa gtggagcgcc atccccggga tcaagccttt
     1201 aat
//
LOCUS       DASCNL010000625         1286 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001286902, whole genome shotgun sequence.
ACCESSION   DASCNL010000625 DASCNL010000000
VERSION     DASCNL010000625.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001286902"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            370..>1286
                     /gene="wecB"
                     /locus_tag="QF359_08340"
     CDS             370..>1286
                     /gene="wecB"
                     /locus_tag="QF359_08340"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HJO86954.1"
                     /translation="MKILSIFGTRPEAIKMAPVIKALEAENSIEHAVCVTAQHRDMLD
                     QVLTLFDINPDFDLDIMADNQDLMHITTAALEGLEKVLDKCQPECVLVHGDTTTSFVA
                     ALAAFYQKIPVGHVEAGLRTGDIYAPWPEEMNRRLTDTICDLHFAPTKSAEQNLLASG
                     AQQSGIIVTGNTVIDALLQVRDRLDNDDSIREQAASHLPELNSDKKLILVTGHRRENF
                     GKGFERICRALAQLAARDDVQIIYPVHLNPNVQEPVNRLLGNLANIHLIDPQDYLPFV
                     YLMKMAHLVITDSGGIQEEAPSLGKPVLV"
BASE COUNT          362 a          308 c          282 g          334 t
ORIGIN      
        1 tacctttctg gtctaggctt ttggcaactt ttttatcgaa gccctggact tcaaggccga
       61 gaaaaccagt ttcagcgcga gccgatccca tccacacggc caatacgcca agaattacca
      121 atattatttt catcaaccga atcttcttcc caacaactta tatagcaaat aaagccataa
      181 tttggcacgg ctcctaaaac ctaacgccta ataattatcc aaacaataga acttttttga
      241 aaaaaataat tatgattcaa tgactttgta aatggatacg cccttgcgaa tggctcaaga
      301 gcgctttatt cactctaata tactggtaaa ttgaaacatt caaaacctga attatagtag
      361 gcataattag tgaaaatact atcgatattt ggcacacggc ccgaagcgat taaaatggcg
      421 cccgtgataa aggccctcga agcagaaaat agcatcgagc atgcagtttg tgtcaccgcc
      481 cagcatcgcg atatgctcga ccaggtgctc acactgtttg atattaatcc tgatttcgat
      541 ctcgatatca tggccgacaa ccaggacctg atgcacataa cgactgctgc acttgaagga
      601 ttggagaagg tattagacaa atgtcaaccg gaatgcgtcc tggtgcatgg tgacacgacc
      661 acgagttttg ttgctgcttt ggcggcattt tatcaaaaaa tcccggtcgg tcatgttgag
      721 gctggtttgc gtactggtga tatctacgct ccgtggccag aggagatgaa ccggcggctt
      781 actgatacga tttgtgacct gcatttcgcg ccaacaaaat cagccgagca aaacttgctg
      841 gctagcggtg cacaacaatc aggcatcatc gtcaccggca atacggttat tgatgcattg
      901 ttgcaggttc gtgatcggct cgataacgac gattctattc gtgagcaagc agcttcgcat
      961 ctgccggaat tgaatagtga caaaaaactg atactcgtca ccggtcaccg ccgcgaaaat
     1021 tttggtaaag gctttgaacg catttgccgg gccctcgctc aattagcggc gcgtgatgat
     1081 gtgcaaataa tctatccggt tcacctcaat ccaaacgttc aggagccggt caatcggctg
     1141 ctgggtaatc ttgccaacat tcatctaatc gacccacagg actacctgcc gttcgtctat
     1201 ttgatgaaga tggcacatct tgtaatcact gattctgggg gtattcaaga agaagcacca
     1261 tcgctcggca aaccggttct ggtaat
//
LOCUS       DASCNL010000626         2492 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001290801, whole genome shotgun sequence.
ACCESSION   DASCNL010000626 DASCNL010000000
VERSION     DASCNL010000626.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001290801"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(9..722)
                     /locus_tag="QF359_08345"
     CDS             complement(9..722)
                     /locus_tag="QF359_08345"
                     /inference="COORDINATES: protein motif:HMM:NF013033.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004800 - thyroxine 5'-deiodinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deiodinase-like protein"
                     /protein_id="HJO86955.1"
                     /translation="MAVAKGETYNYPRFKMSNYELGYFPGPKAGEKVDYNYTLNDLDG
                     NEVNLSNYRGKWLVMETGSLTCPMYVKNVRKFTKLKDKYPDVEWLMIYVREAHPGEKI
                     GQAGTIDKKIAYAKQNQDDYHEERKIVVDSVDGKWHHDWGLLPNMVYVINPEGTVTYR
                     ADWSFANNVDRVLKNRDDIITNEHIVIIGAAPWITIPVTLKGGWIALYDILIIFPKVY
                     YEHLKLDIQTWWGRRKAKK"
     gene            complement(1071..1793)
                     /locus_tag="QF359_08350"
     CDS             complement(1071..1793)
                     /locus_tag="QF359_08350"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO86956.1"
                     /translation="MPSLLITGANRGIGLEFTRQYLSDGWRIYACCRAPEKADTLKKL
                     AEGFSDQLSIYRMDVRNGDEVSAVAEALNGIPIDILINNAGIVDSYGRGVFEGKDDPD
                     LKNYDLDLWLEIFNTNVVSQGRITGEFADNVAASERKMVVMISSGLASINNTWQAGRY
                     AYRTSKAALNMLTRGVGAWLEPRGVTVVTIAPGWTRTELGGPNAHYSVEESISGMRKV
                     LDGLTIKDTGSYWNFDGEQLPW"
     gene            1922..>2492
                     /locus_tag="QF359_08355"
     CDS             1922..>2492
                     /locus_tag="QF359_08355"
                     /inference="COORDINATES: protein motif:HMM:NF014215.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJO86957.1"
                     /translation="MAVENIEFKSDGILLQGYFYTPDEVEGPLPCVVMGGGWCYVKEL
                     IQPEYAKFFTDAGFAAITFDYRNFGDSEGEPRQHINPWEQIDDLINAITYAALLDDVD
                     GNRIGLWGISYAGAHVFPVAALDGRIRCVMSVVPMLDGYYNAIRANSNVGYRELLDII
                     ARDRIERFKTGKQGTIAHSAHPHEKASAFP"
BASE COUNT          633 a          574 c          557 g          728 t
ORIGIN      
        1 cgcccaaatt acttttttgc cttacgtctg ccccaccaag tctggatatc gagcttcaag
       61 tgctcgtaat agaccttggg aaatataatt aggatatcgt acagagcaat ccaaccgcct
      121 tttagcgtga ccgggatcgt aatccaggga gccgcgccga taatgacaat atgctcgttg
      181 gtgatgatat cgtctctgtt tttaagcacc cgatcaacat tgttggcgaa agaccagtct
      241 gcgcggtagg tcaccgttcc ctccggattg attacataaa ccatatttgg aagtaggccc
      301 caatcatggt gccatttgcc gtcgacggaa tcgacgacga tttttcgttc ttcatgatag
      361 tcgtcttggt tttgtttggc gtacgcaatc tttttatcga ttgttccggc ttgacctatt
      421 ttctcgccag ggtgcgcttc tcggacatag atcatcagcc attcgacatc cggatactta
      481 tccttaagtt tggtaaattt tctgacgttc tttacataca tgggacatgt taggctaccc
      541 gtctccatca ccagccattt gcccctgtaa ttagataagt tgacttcgtt tccgtctaga
      601 tcgttcaacg tgtagttgta atcgactttc tctccggctt ttgggccagg gaaataacca
      661 agttcatagt tactcatctt gaaacgggga tagttgtacg tctctccttt agccacagcc
      721 actactctta cctttcaaat taattattgg gcatttctca aacgattttc ctattcatgg
      781 tgatgctact taatttgtat tgttgtggaa ataaattttc ccttttttgc ctataaaaag
      841 acctaaattt tatcatttgg ctgggtccgg agtccaatag ttcaactcta ccgccattaa
      901 ggcacgcttc taccatcata ttacctcgct ttgggtttct tcgccttgta tgttcaaaga
      961 cagatcgccg tgttttaagg aaaaatcgat agaattcgtt ataaatacaa ttgaaaaatc
     1021 aggctgtgaa taattgtgtc tggataacaa agacgatcag gtaatatcaa ctaccacggc
     1081 aattgttcac catcgaaatt ccaatagctt cctgtgtctt tgatggtcag gccatcaaga
     1141 acctttcgca tgccggatat agactcttca actgagtagt gggcattggg gccgccgagt
     1201 tctgtgcgag tccaaccagg ggcaatagta accaccgtga cgccacgcgg ttccagccat
     1261 gcaccgaccc cgcgggtcaa catattgagg gccgctttgc tggtgcgata ggcatagcgg
     1321 ccagcttgcc aggtattgtt gatggacgcc aggccggatg aaatcatgac taccattttt
     1381 cgttcgcttg cagcgacgtt atcggcaaat tcaccagtaa tacgaccttg tgacacgaca
     1441 tttgtgttaa agatttcaag ccagagatcg aggtcataat ttttcaggtc agggtcatcc
     1501 ttgccttcaa atacaccccg gccgtaactg tcgacgatgc cggcattatt aatcaatata
     1561 tcgatcggga tgccgttcaa ggcctcagct acagcggaaa cttcgtcacc gttcctaaca
     1621 tccatcctat aaatcgacaa ttgatcagaa aaaccctcag ctaatttttt gagagtatct
     1681 gctttttccg gcgctcgaca gcaggcgtaa atccgccagc catcggatag atattggcgg
     1741 gtaaattcta gaccgatacc tcgattagcg ccggtgatta ataggctagg cataatgaaa
     1801 ttctaaacac tgctgaccaa tatgcaacgg taaatctgta cgagaaagat ctaattgaag
     1861 tttattgttg tttatacata atggtcaatc tattgaattt gtttagcgag agaaatgaaa
     1921 aatggctgta gaaaatattg agttcaaaag tgatggcatt cttctacaag gatattttta
     1981 cacaccagat gaagttgagg gcccgttacc gtgtgtcgtc atgggagggg gttggtgcta
     2041 tgtgaaggaa ttgattcagc ccgaatatgc caaatttttc actgatgccg ggtttgccgc
     2101 gataactttt gattaccgaa atttcggcga tagcgaaggt gaaccacgcc agcatattaa
     2161 cccctgggaa caaatcgacg atctaatcaa cgccatcact tatgccgccc tgctcgatga
     2221 cgtagatggt aaccgaattg gtctttgggg aatttcatac gctggagcac atgtctttcc
     2281 ggtcgccgcg cttgatggtc ggatacgctg tgtaatgtcc gtagtgccca tgctggacgg
     2341 ttattataat gctatccggg ctaattccaa tgtcggctat cgggaacttc tggatattat
     2401 cgcccgtgat cggatcgagc ggtttaagac tgggaaacag ggtaccattg ctcattccgc
     2461 tcaccctcat gaaaaagctt cggcgtttcc gg
//
LOCUS       DASCNL010000627         1608 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001291863, whole genome shotgun sequence.
ACCESSION   DASCNL010000627 DASCNL010000000
VERSION     DASCNL010000627.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001291863"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="QF359_08360"
     CDS             complement(<1..447)
                     /locus_tag="QF359_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HJO86958.1"
                     /translation="MNAAVSDTVDQAQSVEKYKYGFVTDIEADQAPKGLNVDIIRFIS
                     AKKEEPEWLLGGRLKAYAHWLTMEEPDWPKVKYPPIDYQDSYYYSAPKSNEDGPKSLD
                     DVDPELLATYEKLGIPLYEQEVLAGVKNVAVDAVFDSVSVATTFKDA"
     gene            complement(485..>1608)
                     /locus_tag="QF359_08365"
     CDS             complement(485..>1608)
                     /locus_tag="QF359_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HJO86959.1"
                     /translation="KQTVYFDHNATTPVRAEVAEAVAGALALTGNASSVHTAGRQARQ
                     SVEQAREQIAELVGVSPAQIVFTGSGTEANNLVLRGTDCTHVLASEIEHYSVLAAADN
                     IELLPVDGDGVIDVAVLKSRLEDLDGSALVSVMLANNETGVIEPAAEISRIAKEHGAL
                     IHTDAIQAAGKIKVDWVELGVDFISLSAHKIGGPQGIGALVMNEDIPLTSLIRGGGQE
                     RSRRAGTENVPGIVGFGAAAKLAAENLGKANEIGILRDHLELRVKEIAPDAEVFGESV
                     ERLPNTTCLTMPNIASETQVMKFDLTGIMVSAGSACSSGKVQTSHVLKVMGIVEDVAS
                     TAIRVSLGHGNTMDEVEHFVSQWREIYIQANPDKLKGAA"
BASE COUNT          394 a          448 c          331 g          435 t
ORIGIN      
        1 cgcatcttta aacgtagtcg ccaccgaaac actatcgaac actgcatcaa cagcgacatt
       61 tttaacgccg gccaacacct cttgttcata taaaggaatg ccgagttttt cataggtcgc
      121 caacaattcg ggatcaacat cgtccagact tttaggtcca tcttcattgg atttcggtgc
      181 cgagtagtaa tacgaatcct gataatcaat cggcgggtat ttaactttcg gccaatccgg
      241 ttcttccatt gtcaaccaat gggcataagc ctttagccgc cctccgagca gccattccgg
      301 ctcttctttt ttagccgaaa taaagcgaat gatatctacg ttaagccctt ttggcgcctg
      361 atcggcctca atatcagtaa caaaaccata tttatatttt tcgactgatt gggcttgatc
      421 gacggtatct gaaactgctg cattcattta attgtacctg gtacctttat tgtattcccg
      481 gctattacgc cgcacctttt aacttatcgg gatttgcttg gatataaatt tcccgccatt
      541 ggctgacaaa gtgttcaact tcatccatcg tattgccatg accgagactg acgcgaatgg
      601 cagtagaggc aacgtcctca acgataccca tcactttcaa aacatgtgaa gtctgaactt
      661 taccagaaga acatgccgaa cccgcactga ccataatccc ggttaaatca aacttcatta
      721 cctgggtttc actagcgata tttggcattg ttaggcaggt tgtgttaggc aatctttcaa
      781 cgctttcccc aaaaacctcc gcatccggtg ctatttcctt gaccctcaat tccaaatgat
      841 ctcggagaat tccaatttca ttggctttac caaggttttc cgctgccaat tttgctgctg
      901 caccaaagcc aacaataccc ggtacgtttt ccgtgcctgc tcggcggctg cgttcttgcc
      961 cgccacctcg aattagtgat gtgaggggta tatcttcgtt catcaccaaa gcacctatgc
     1021 cctggggtcc gccaattttg tgggcggata ggctgataaa gtcgaccccc aattccaccc
     1081 agtcgacttt gattttacct gctgcctgga tggcatcggt atgaatcagt gcaccgtgct
     1141 ctttggcgat gcgggaaatt tcggctgccg gctcaatcac accggtttca ttattagcca
     1201 acatgaccga aaccaaggcc gagccatcca gatcttccag ccgagatttt aaaaccgcca
     1261 catcgattac accatcacca tcaaccggca ataattcaat attatctgct gccgccagta
     1321 ccgaataatg ctcaatttct gaagccaaaa catgagtgca atccgtacca cgcaaaacca
     1381 gattattggc ttccgtacca ctgccggtga acacgatttg cgccgggctc acaccaacca
     1441 gttcggcgat ttgttcgcgc gcctgctcta ctgattgccg cgcctgacgt ccggccgtat
     1501 gcacggagga tgcgttgccg gtcaaagcca aagctccggc aaccgcctcg gcaacttccg
     1561 cccgcaccgg cgttgttgcg ttgtgatcaa aataaacggt ttgtttca
//
LOCUS       DASCNL010000628         1570 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001296612, whole genome shotgun sequence.
ACCESSION   DASCNL010000628 DASCNL010000000
VERSION     DASCNL010000628.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001296612"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(74..397)
                     /gene="zapA"
                     /locus_tag="QF359_08370"
     CDS             complement(74..397)
                     /gene="zapA"
                     /locus_tag="QF359_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HJO86960.1"
                     /translation="MAQVTVTINGRKYDIACDDGQEAHLTRLSQYVDRRVNELAATVG
                     QVGDARLLVMISLLVADELSEVNTELDSLRNEKLAPAQSALGASDLEKMATRIESIAD
                     KLEAS"
     gene            complement(399..656)
                     /locus_tag="QF359_08375"
     CDS             complement(399..656)
                     /locus_tag="QF359_08375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86961.1"
                     /translation="MAKPSTQSTSSIQAAKSKLDTALVRLDKVIKAKAKTTKDSRGGN
                     GKLDKELTAAKAEISELKEKNQIVSTRLDGAIDRMKKILES"
     gene            832..>1570
                     /locus_tag="QF359_08380"
     CDS             832..>1570
                     /locus_tag="QF359_08380"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004365 - glyceraldehyde-3-phosphate
                     dehydrogenase (NAD+) (phosphorylating) activity [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HJO86962.1"
                     /translation="MALRVAINGFGRIGRLVYRAILEANNDGIEVVCINDLGPTKSNA
                     HLLKFDSTHGILPQDVKVDGDTMDAGQGPVWVTAERDPAKLPWQELDVDIALECTGFF
                     SSKEKASAHLDAGAKRVIVSAPASGADITVVYGVNSDQISADHTVISNASCTTNCLAP
                     VAHVLHNAVGIERGFMTTIHSYTGDQRTVDTLHSDLHRARTAAGSMIPTSTGAAKAVG
                     LVLPELNGKLDGTSVRVPTPNVSLIDFT"
BASE COUNT          356 a          395 c          390 g          429 t
ORIGIN      
        1 acagctcccg agtagtattt attggccctg gagatttacc acacttcacg ggccccgcag
       61 cgtcaaacta tatttaggat gcttcgagct tgtcggcaat gctttcgata cgcgtcgcca
      121 ttttttccag atcgctggca ccgagcgcag attgagccgg cgcaagcttt tcatttctga
      181 gcgaatcaag ctcggtgtta acttcggata gctcatcggc gaccagcaag gagatcatca
      241 ccagcaagcg ggcgtcgccg acttggccaa cagttgcggc caattcatta acccgccggt
      301 cgacatattg ggaaagcctt gtcaaatgcg cttcctgacc gtcatcgcag gcaatgtcgt
      361 attttctgcc gttaatggtt acagtgactt gggccatatc agctttccag aatttttttc
      421 atgcggtcaa tcgccccatc gagccgggtc gaaacaattt ggttcttttc tttgagctcg
      481 gaaatttcgg ctttggctgc ggttagttct ttatctaact tgccatttcc accacgggaa
      541 tctttggtcg ttttggcttt cgctttgatg actttatcca atcgaacaag cgcggtatca
      601 agcttagatt tcgctgcctg aatagaagaa gtgctttgtg tggaaggttt tgccaagatt
      661 tcttaaactc cccaattagg ttcaaagatt acgcctttgc tagcaattcc gtcaaccgta
      721 cgattgccga aattattaga tagttgccat gaattttgag ggcttgacga gagtggcgta
      781 acttaggatt gtgcgccgca agttgatggt ttttttctaa cggaggaacg gatggctcta
      841 cgggtagcaa ttaatggatt tggcagaatt ggccgcttgg tctatcgcgc aatattagaa
      901 gccaataatg atggtataga agttgtctgt attaatgatt tgggtccaac caaatcgaat
      961 gcacacctct tgaaatttga ttcaacccac ggcattttac cacaggacgt taaagttgat
     1021 ggcgacacca tggatgccgg gcaaggcccg gtctgggtaa ctgctgaacg cgatccagcg
     1081 aaattgccct ggcaagaatt ggacgttgat atcgcgctgg aatgcactgg cttttttagc
     1141 agcaaagaaa aagcatcagc tcatctggac gccggcgcca aacgggtgat tgtatccgca
     1201 ccggcatcag gagccgatat caccgtcgtt tacggcgtca attccgatca gatcagcgct
     1261 gatcatacgg tcatttcgaa cgcgtcctgc accactaatt gtttggcccc tgtcgcccac
     1321 gtcctccata acgccgttgg tattgagcgt ggttttatga ccaccattca ctcttacacc
     1381 ggtgatcagc gcacggttga tacgctccac agcgatcttc atcgcgcgcg cactgctgct
     1441 ggctcgatga tcccaacctc gactggtgcc gccaaagcag ttggcttggt gctgccggaa
     1501 ttgaacggca aactggacgg cacttcggtt cgcgtgccga cgccgaatgt ttctttgatc
     1561 gacttcacct
//
LOCUS       DASCNL010000629         1872 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001298626, whole genome shotgun sequence.
ACCESSION   DASCNL010000629 DASCNL010000000
VERSION     DASCNL010000629.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001298626"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            92..985
                     /locus_tag="QF359_08385"
     CDS             92..985
                     /locus_tag="QF359_08385"
                     /inference="COORDINATES: protein motif:HMM:NF024118.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJO86963.1"
                     /translation="MKIVMLGTGAAIPDADRNDSGIVINVRDKWYMFDCGAGATQQMV
                     RGHMDPTLADIVFLSHLHYDHIADFPYFMIATWMCNRETIPTVVGPEGTKHFVNHLLE
                     DGAYAKDIEARAQFPNRAKNLHVIRPNVVECEPGLIYEDDLVKVTACYVEHIPREISP
                     CFGLRLDTVDGQSVSFSGDTAPCDAFVELSKDVDLMIHECTFPESALEFRRKAQVGTW
                     SHTSPIELGKLAKRANAKSLVATHFGHFDTTNPVTKKLMAIHMPEEIIGPDLLDEVTT
                     DIKKNYDGPLRLAHDLMRIDL"
     gene            complement(991..1194)
                     /locus_tag="QF359_08390"
     CDS             complement(991..1194)
                     /locus_tag="QF359_08390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86964.1"
                     /translation="MWFEGPVFYHEEVEIVQDSKDVINTFNGNDVEITLDRVDADHLT
                     SYSVTEDPSGDIVAVSESEATGS"
     gene            complement(1437..>1872)
                     /locus_tag="QF359_08395"
     CDS             complement(1437..>1872)
                     /locus_tag="QF359_08395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86965.1"
                     /translation="AALNRSNRHFNRPFSAIVDELIEILFTGIVNVCGWAAPDNFDVI
                     DHRDFIGDLPDVFYVTGGRKSRGAKFLDAFENMIVTKAFGYALEFNFWNGHVAPLTKI
                     ICLKIADLGQKVKQSGFFCALALEDKSVRTNQLYTYFCGPTT"
BASE COUNT          499 a          472 c          416 g          485 t
ORIGIN      
        1 tttgaacgac tcgatcgtca ctcaccgttt gacctgaaga acacatattc actatcctct
       61 ttgacaatta ataattggat agggtgtaat catgaaaata gtcatgctcg gcacaggcgc
      121 cgccatcccg gacgcagacc gcaatgattc cggcatcgtc atcaatgtac gcgacaaatg
      181 gtacatgttc gattgcggtg ctggggcaac acagcaaatg gtgcgtggtc atatggaccc
      241 gacactcgct gatatcgtgt tcttatccca tctccattat gaccatatag ctgacttccc
      301 ctatttcatg atcgcgactt ggatgtgtaa tcgcgagact ataccgacgg tcgttggacc
      361 ggaaggaact aaacattttg ttaatcattt actggaggac ggcgcctatg ccaaagatat
      421 cgaggcccgt gcgcagtttc caaaccgcgc aaaaaacctt catgtgatac gtcccaacgt
      481 agttgagtgc gagccgggtc tgatctacga agatgatttg gtaaaagtaa ccgcctgcta
      541 cgttgagcac atcccgcgcg aaatatctcc gtgctttggt ttgcgcttgg acaccgtcga
      601 tgggcaatcg gtatcgttca gcggtgacac ggcgccctgt gatgcctttg tagaactatc
      661 caaagatgtc gatttaatga tccatgaatg caccttcccg gaaagcgctt tggagtttcg
      721 caggaaagcg caagtgggaa cgtggtccca taccagcccc attgaacttg gcaaattggc
      781 gaagcgcgcc aacgccaaga gcctggtcgc cactcatttc ggtcattttg acacgaccaa
      841 tccagtaact aagaaattga tggccattca tatgccggaa gaaattattg gccccgattt
      901 attggatgag gtcaccacag atatcaaaaa gaattacgat ggcccgttac gcctcgcgca
      961 tgatctgatg cggatcgatc tgtgagttgc ctaactgccg gttgcttctg attcagaaac
     1021 ggcgacaata tcgccagacg gatcttcggt gacggaataa ctcgtcaaat gatcggcatc
     1081 gacccgatcc aatgtgattt caacatcatt gccattgaag gtgttaatga cgtctttgct
     1141 gtcctgaacg atctcaactt cttcatgata aaataccgga ccctcaaacc acaattcgtt
     1201 accgagttta aaatctttga cgatgtcgct gccgatttgc cacctttgcg gccttttaga
     1261 tcatcttcac caacatcgcc atactgcata tcgtcgccat catcgcccaa agttccggcc
     1321 gattatgttg caccttcagc cacaccggaa atactgattg atagagtttc tgatgaatcg
     1381 atatccttcc caatttcacg cgtaatttac accttttgag tgttattgtc tgtgatctag
     1441 gtcgtagggc cgcaaaaata cgtatatagc tgatttgtcc gcaccgactt atcttccagt
     1501 gccaaggcgc aaaaaaagcc ggattgcttt actttttggc ccaaatcggc aatcttcaga
     1561 catataattt tagtcagcgg ggcaacatga ccgttccaaa aattaaactc gagggcataa
     1621 ccaaaagctt tggtgacaat catgttctca aaggcgtcca ggaacttagc gccacgactt
     1681 tttctaccac cagtgacata aaagacgtcc ggcagatcgc caataaaatc acgatgatct
     1741 atgacgtcaa aattatctgg tgcggcccaa ccgcagacgt taacaattcc ggtaaagagt
     1801 atctcgatca gttcatccac aatcgcgctg aagggccgat taaaatggcg attacttctg
     1861 tttaaggccg ct
//
LOCUS       DASCNL010000630         2229 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001300633, whole genome shotgun sequence.
ACCESSION   DASCNL010000630 DASCNL010000000
VERSION     DASCNL010000630.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001300633"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..901
                     /locus_tag="QF359_08400"
     CDS             <1..901
                     /locus_tag="QF359_08400"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86966.1"
                     /translation="HSLKAQQVGIIYVSHRLDEIVELSDKCTTLRDGKVVDVSTRGHV
                     EKENIIRLMTGRDLAELHQPHKLEFGETLIEHDNAISLRRGEVLGLAGLLGSGTTGYL
                     RNLLGAGENAVAMNLLGDEIQLKNPIAAIKHGIGMVPGERRHTLIYDLSVRDNIVLPH
                     LSEISNGWRLDLKRIDKLVTDLIEALDIRPRDPKKLVRLLSGGNQQKVVFARWLIGNF
                     KVLLLDEPTHGIDVGAKARIHRLMKEFTERGGGILFASSEMNEVVNMSDNIIAMRQGE
                     IIATMSRETGEYSEGYLREALGG"
     gene            898..1899
                     /locus_tag="QF359_08405"
     CDS             898..1899
                     /locus_tag="QF359_08405"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO86967.1"
                     /translation="MTTSKENQTIAIGALPEANEKRFTVVAVLDQMPLVALVLLCLVT
                     AILSDRFLSPINLTNILLQASVMAIVAMGMTYVIISGGFDLSVGSIVALSGCVSAWVM
                     LETNVPLGIAAGIAIGGVVGYLNGYIVSRLKVNPFIATLGMMVIVRGAVLLITDGRPI
                     VGEDGLPEIFLELGSGRFLGIHYLIWVPVILFIIFSWLLHMTAYGRRLFATGGNREAA
                     YLAGIQVKRVVTSAYVWCGILGGVAGVMLASRLQSGQPTAGEFYELTSIAAVVLGGAA
                     LHGGVGKLYKSMIGVFIMMVLANSLNLLNVHSYWQRVAVGLVIIAAAAADQIKSRRN"
     gene            1983..>2229
                     /locus_tag="QF359_08410"
     CDS             1983..>2229
                     /locus_tag="QF359_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86968.1"
                     /translation="MKKLLILIIGLAAILTTSPAVQAAGKTIGVALASDTNPFYIVMR
                     KGIEIQAKKLGWKVRIVTANEDVNKQVNGVMDLVAQKV"
BASE COUNT          528 a          481 c          602 g          618 t
ORIGIN      
        1 tcattctctc aaggcgcaac aggttggcat tatctatgta tcccatcggc ttgatgaaat
       61 tgttgaactt tcagacaaat gcacgacctt gcgggatggc aaagttgtcg atgtttcgac
      121 tcgtggtcac gttgagaaag aaaacatcat ccgtttgatg accgggcgtg atttggccga
      181 attgcatcaa cctcataaac ttgagttcgg tgagacactg attgaacatg ataacgcgat
      241 ttccttgcgc cgtggtgaag tgcttggcct ggccggtttg cttggcagcg gtaccaccgg
      301 ctatttgcgt aatcttttag gtgctggcga gaatgcggtt gccatgaatt tgttgggtga
      361 cgaaattcaa ctaaaaaacc ctattgcggc gattaagcat ggcattggga tggtgcctgg
      421 cgagcggcgg cacaccttga tctacgatct gtcggtacgt gacaacatcg ttttacccca
      481 tttgtcagaa atttcaaacg ggtggcgtct cgatttgaag cggatcgata agctcgtcac
      541 cgatctcata gaggccttgg atatccggcc gcgtgatcca aaaaaattgg tgcggttact
      601 ttccggcggt aatcagcaaa aagtagtatt tgcgcgctgg ctgatcggca attttaaggt
      661 gctgttgctc gacgaaccca ctcatggcat tgatgttggc gccaaagcgc gcattcaccg
      721 cctgatgaag gaatttaccg aacgaggcgg cggcatctta tttgcttcct ctgaaatgaa
      781 tgaagtggtc aatatgagcg ataatatcat tgccatgcgt caaggtgaaa tcattgccac
      841 aatgtcccgg gaaaccggcg aatatagtga aggctatttg agggaagctc tgggcggatg
      901 acgacatcta aagaaaatca aaccatcgct atcggggccc tgccggaagc aaacgaaaaa
      961 cggtttactg tagtcgctgt attggatcag atgccgttgg ttgccctggt gttgctgtgt
     1021 ttggttacag cgatcctttc tgatcgtttt ctgtcgccga ttaatctgac aaatatttta
     1081 ttgcaggctt cggtaatggc gatcgttgcc atggggatga cctatgtcat tatttccggt
     1141 ggctttgatt tgtcagttgg ctccattgtt gctttatcag gctgtgtttc tgcctgggtt
     1201 atgttggaaa ccaatgtgcc gctggggatt gccgccggga tcgcgatcgg cggtgttgtc
     1261 ggctacctca atggctatat tgtgtcgcgt ttaaaggtaa atccctttat tgcgacgctt
     1321 ggcatgatgg tcatcgtgcg tggtgccgtg ctgctgatta ccgatggccg gccaattgtc
     1381 ggcgaggatg gtctgccgga aatatttctt gaacttggca gtggccggtt tttgggaatt
     1441 cactacctaa tctgggtgcc ggttatctta ttcatcattt ttagttggct gctgcatatg
     1501 acggcttatg gccgccggtt atttgctact ggtggtaatc gtgaagctgc ttatctggcg
     1561 ggtattcagg ttaagcgcgt ggtgacgtcg gcttacgtgt ggtgcggaat acttggtggt
     1621 gttgctggcg ttatgctggc gtcgcgtctc caatccggcc agccgacagc gggagaattt
     1681 tacgaattga cgtcaattgc agccgttgta cttggcggtg ctgcgctgca tggcggtgtc
     1741 ggcaaacttt ataaaagtat gataggcgtg ttcatcatga tggtattggc aaacagcctg
     1801 aatttactga acgtgcattc atactggcaa cgcgtggccg tcggtctggt gataatcgcc
     1861 gccgccgccg ctgaccaaat taaatccaga cgaaattaac cagggaacga aaaccataaa
     1921 attacaacaa gaattcatcc aacccaaaca acaggctaaa tctaactaat aggaggaata
     1981 ttatgaaaaa gttactcatt ctcatcattg gcttggcggc tattttgaca acatcaccgg
     2041 cggtgcaggc ggctggcaaa acaattggtg tcgccttagc ctctgatacc aatccatttt
     2101 acatcgtgat gcgtaaaggc atcgaaattc aggcaaaaaa attgggctgg aaagtccgca
     2161 tagttaccgc caatgaagat gtaaataagc aagttaacgg cgttatggac ctagttgccc
     2221 aaaaagttg
//
LOCUS       DASCNL010000631         2826 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001301022, whole genome shotgun sequence.
ACCESSION   DASCNL010000631 DASCNL010000000
VERSION     DASCNL010000631.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001301022"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(34..906)
                     /locus_tag="QF359_08415"
     CDS             complement(34..906)
                     /locus_tag="QF359_08415"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO86969.1"
                     /translation="MIEWINSIVQGVLTGGLYALFATGLAIIFGVMRLINITHGDLIV
                     LAAFVAMVIIETTGLNPFLSMLAVLPIMFVFGYFLQRGILNFTLGDDLLPPLLVTFGL
                     SIVIQNVLLQIFSADSQRLKVGSIETTSLHLTNNLAVGVFPLIIFVTAVVLIIILQYI
                     FNSTDIGRAFRATSDDPTTAQLMGINNKHIFGLAMGVAMVLVGIAGVFLAIRTNFDPS
                     IGPSRLLYAFEAVIMGGMGSLWGTLAGGIILGVAQNIGAKLDPGWQILAGHIAFLIVL
                     IFRPRGLFQRTFDE"
     gene            complement(903..1607)
                     /locus_tag="QF359_08420"
     CDS             complement(903..1607)
                     /locus_tag="QF359_08420"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO86970.1"
                     /translation="MSLLSVRNLSAFYGDYQALFGIDFTLMQGETVAVIGANAAGKST
                     FLRAITGLVNTRSDEFNYQGNPLDGSAASKIVEMGIAMVPEGRRLFPSLSVEDNLKIG
                     AYSGRAGKWTLQRVYEMFPKLRERSEVSGTSLSGGEQQMVAIGRALMANPDLLLCDEL
                     SLGLAPIIIKDIYDALPAIKAEGVSLLVVEQDINQALAIADRFYCFQEGRITLSGSPE
                     DSSKANIATAYFGRSQ"
     gene            complement(1604..2329)
                     /locus_tag="QF359_08425"
     CDS             complement(1604..2329)
                     /locus_tag="QF359_08425"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO86971.1"
                     /translation="MTRYLEAENLSKSFGSLLVIDNFNMHLDEGEALGIIGPNGAGKS
                     TLFNLIAGTLRPNTGTVSFEGRDISHLPAHDRCRAGIARSYQIPHPFAGMTVFENLLV
                     GGAFGGESGEAETYGFCVDILERTQLICKANVLAGSLTLLERKRLELARALATRPRIL
                     MLDEIAGGLTEHEVDELIDLIREIQTENISVIWIEHIVHALLSVIDRLLVINFGQKMD
                     DGDPQVVIDSPEVQKIYMGISVE"
     gene            complement(2326..>2826)
                     /locus_tag="QF359_08430"
     CDS             complement(2326..>2826)
                     /locus_tag="QF359_08430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86972.1"
                     /translation="DLLVRHDEVLIVSESSRAISPFNINQDNIGFRVNFLMSASGRAY
                     LAYCPFDEKEEIVDKLRHSSDPSYQLAHKREKLDAILREVKEQRFALRDSTYGGGYGL
                     RRPTNQDGMMAIAVPILSETGVEGVVSMVWFPTAVAIDKIIGEFLDELWIAADEIASN
                     LPALVK"
BASE COUNT          797 a          745 c          642 g          642 t
ORIGIN      
        1 gacctttcga cccgatagtc tatggccgac ccgctattca tcgaacgtcc tctgaaatag
       61 acctctggga cggaatatca gaacaataag aaaagcgata tgtccagcca gaatctgcca
      121 gcccggatcc aatttggcac cgatattttg cgccacaccc aaaataattc caccggccag
      181 cgtgccccac agcgatccca tgccccccat aatcaccgct tcaaaagcgt aaagcagccg
      241 tgacggccca atggacggat cgaaatttgt ccggatggcg agaaaaacac cggcaatacc
      301 caccaaaacc atcgccacgc ccatggctaa gccgaaaata tgtttgttgt tgatacccat
      361 caactgggcg gtagtaggat catcggatgt tgcccggaaa gcccggccga tatcagtgct
      421 attgaaaata tattgcagga ttattattag aacgacggcc gtaacaaaaa ttatcagggg
      481 gaaaacgcca accgctaaat tgttcgtaag atgcaagctt gtggtttcaa tgctaccaac
      541 tttgagccgc tgagaatcgg cggaaaaaat ctggagtaaa acgttctgaa taacaataga
      601 cagaccaaaa gtgaccaata agggtggcag cagatcatca ccgagggtaa aatttaagat
      661 gccccgttgc aaaaaatagc cgaatacgaa catgatcggc aatacggcga gcatggaaag
      721 aaatggattt aggcccgtgg tctcgatgat caccatggcg acgaaagcag caagcacgat
      781 taaatcaccg tgggtaatat ttatcagccg catgaccccg aaaataatag cgagacccgt
      841 ggcaaacaga gcatagagtc ccccggttaa gacgccttga acaattgaat tgatccattc
      901 aatcattgtg atctaccgaa ataggcggtg gcgatatttg ccttggaaga atcttcaggg
      961 ctgccactca aggtaatgcg cccttcctga aaacaataaa accggtcggc aatcgccaag
     1021 gcctgattga tatcctgttc gacgaccaaa agcgacacac cttcagcctt aattgccggc
     1081 agggcatcat aaatatcttt gataattatc ggcgccaaac ccagcgaaag ctcatcacag
     1141 agcagtaaat ctggattggc cattaaagct cgtccgatag ccaccatttg ctgctcgccg
     1201 ccactcaacg acgttcccga aacttcgctg cgttctctga gtttggggaa catttcatag
     1261 acgcgttgca gggtccattt tccggcacgc ccactatagg cgccaatttt gagattgtcc
     1321 tcgacgctca gactgggaaa aagccggcgg ccttcaggca ccatggcaat tcccatctcg
     1381 actatcttgc tggccgccga gccgtcgagc gggttgcctt gataattgaa ttcatcggac
     1441 cgcgtattta ccagacccgt gatggcgcgg agaaaggtcg atttgcccgc agcattggcg
     1501 ccgataacgg caacagtttc accttgcatt aatgtgaaat cgataccgaa caatgcctgg
     1561 tagtcgccat aaaatgccga aagatttctg acactcaaga gactcattcg acactgatcc
     1621 ccatataaat tttttggact tcgggactat cgattacgac ttgaggatcg ccatcatcca
     1681 tcttttgccc gaaattgatt accaacagtc ggtcaatcac agatagcagg gcatgcacga
     1741 tatgctcgat ccagataacc gatatatttt cagtctggat ttctcggatt aaatcgatca
     1801 gttcatcaac ctcatgttcg gtgaggccac cggctatttc atctaacatc aaaattcgcg
     1861 gtcgggtcgc taacgccctg gctaactcca agcgcttgcg ttccaacaat gtcaaagacc
     1921 cggccaaaac attggctttg cagatcaact gggttcgctc caatatatcg acgcaaaaac
     1981 cgtaggtttc tgcttccccg gattcaccgc caaaagctcc accaaccagg agattttcga
     2041 aaaccgtcat gccagcgaat gggtggggaa tttgatacga tctggcgatg ccggcccggc
     2101 agcggtcatg ggccggcaga tgagagatat ccctaccttc gaaggataca gtacccgtat
     2161 tgggccgtaa ggtgcccgca atcagattga agagagtgct cttacccgca ccattaggac
     2221 caataattcc caaagcctca ccttcatcca aatgcatgtt gaaattgtcg atcaccaaaa
     2281 gagaaccaaa acttttggac aggttctcag cctcaagata acgggtcatt tcaccagcgc
     2341 cggaagattt gaagcaattt catcagcggc aatccagagt tcatcgagaa attcaccgat
     2401 tattttgtcg atggcaaccg cagtcgggaa ccacaccatg ctgaccacgc cctccacccc
     2461 ggtttcggat aatattggca ccgcaatcgc catcataccg tcctggttgg ttggccgccg
     2521 taatccgtag ccgccaccat aggtggaatc acgcaaagcg aatctctgct ctttcacttc
     2581 ccgcaatatt gcgtctagtt tttccctttt gtgagccaac tgatagctgg gatcgctgga
     2641 gtgacgaagt ttatcgacaa tttcctcttt ttcatcaaac gggcaatacg ctaaataagc
     2701 gcgacctgac gcagacatca aaaaatttac gcggaagcca atattgtctt ggttgatatt
     2761 aaacgggctg atggcgcggc tggattccga aacaataagt acttcatcgt ggcgaaccag
     2821 caaatc
//
LOCUS       DASCNL010000632         2806 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001301533, whole genome shotgun sequence.
ACCESSION   DASCNL010000632 DASCNL010000000
VERSION     DASCNL010000632.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001301533"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="QF359_08435"
     CDS             complement(<1..349)
                     /locus_tag="QF359_08435"
                     /inference="COORDINATES: protein motif:HMM:NF013777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJO86973.1"
                     /translation="MSDVEQNTESIDNAAQLSPGNLDLLSTRPAQTVIGYLSNKWNVL
                     IIRRLSRKTMRYSELRRDIGDISQKMLTQTLRHLERVGLVERKIYPVVPPKVEYSLTE
                     LGWTLVEPINENIN"
     gene            507..1244
                     /locus_tag="QF359_08440"
     CDS             507..1244
                     /locus_tag="QF359_08440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86974.1"
                     /translation="MDQGIRAFWYDLPEDKKDTYIDWLHSTYLLEVLQRPGILWAAHY
                     EVTGGGKHMDEIADHLARVDLEEVGKGQNYVLLVGAGSPHVFFKPIYEEVDAENPKTQ
                     EMLAIRLEERVNVFAEEARVNGPDFDYRIHDSTPGPAIQMGSFCTMELEKEWDLAAWY
                     AQYRMPAMARMPGSINTRKLVSVAGWAKHAVIYEFISLDARQEHFQNHESLAMDETVW
                     TNKIINYTIHAPGSPSVGRRIWPPVKD"
     gene            1267..1518
                     /locus_tag="QF359_08445"
     CDS             1267..1518
                     /locus_tag="QF359_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86975.1"
                     /translation="MSLITIPTDDEANPLQKSMFEHSKKILGRVANAVRVGSHTPKLM
                     QSLFGFIVSSLRQEITGNLPVRTKCLTILKTSTLNGCAY"
     gene            1570..1929
                     /locus_tag="QF359_08450"
     CDS             1570..1929
                     /locus_tag="QF359_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86976.1"
                     /translation="MAEITGDYLNSDSFTAEEKAAMRWAEVMTNKLYQGSPGNPPQHH
                     AALEELKKYYNDAQVIELSMVSGFFNFWNRFTDILEIDIEQGALMDAFSRSTKIDPDD
                     FTAYMRDCWWNDGKETS"
     gene            1942..2124
                     /locus_tag="QF359_08455"
     CDS             1942..2124
                     /locus_tag="QF359_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86977.1"
                     /translation="MVKVKEFPDGAREEFLNRDMPMFEGTPLLPGPPLAERRVALIST
                     AGLHRLVSVSTASFLE"
     gene            2299..>2806
                     /locus_tag="QF359_08460"
     CDS             2299..>2806
                     /locus_tag="QF359_08460"
                     /inference="COORDINATES: protein motif:HMM:NF017945.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HJO86978.1"
                     /translation="MSASKQSKGISAMAWNTLDWLDLMLRWFHIMGGISWIGGSLYLL
                     WLDRIFADPERAAKGEHGEPWMIDQAGSLLVEKLKLEPDGLTKTHIWFKRETILTWVS
                     GILLLLMVAPLPGSLLTGSGGQPINAFTSAAIVVALLALSWFCYDLLWRLSLSRNTAL
                     LLTLSLGLF"
BASE COUNT          725 a          715 c          703 g          663 t
ORIGIN      
        1 ggttaatgtt ctcattgatc ggctcaacga gagtccaacc gagctcagtc agcgaatatt
       61 caacttttgg cggcacaacg gggtaaatct tacgctcaac cagaccaact cgctcaaggt
      121 ggcgcaaagt ctgggtcagc attttctgcg aaatatcgcc aatatcccgg cgcagttctg
      181 aatagcgcat ggttttccgc gacaatcgcc ggataatcag cacattccat ttattggaca
      241 aatagccaat gaccgtttgc gctggacgtg ttgaaagcaa atccaaattt cctggcgaca
      301 gttgggccgc attgtctatc gactcagtat tctgctctac gtctgacata caattaattc
      361 caaaattaac taactctcct tttggtaagt accctacttt taagatagta cattatcaaa
      421 tagcatgtgg cggattatgc atagtaataa tcgtttggga atagtatttt aaaccctgac
      481 gaaattaact tagggagcac agataaatgg accaaggcat ccgggcgttc tggtacgatc
      541 taccggaaga taaaaaagac acctatattg attggctgca cagcacgtat ctgctggaag
      601 ttctgcaacg tccaggtatt ctatgggcag cccattatga ggtcaccggc ggtggcaaac
      661 atatggatga gattgccgat catctagccc gggtagatct cgaagaggtc ggcaaaggcc
      721 agaattatgt cttgctggtg ggcgccggtt cacctcatgt gttctttaag ccaatctatg
      781 aagaagtcga tgccgaaaat cctaaaactc aggaaatgct ggccatccgt ctcgaagagc
      841 gcgtcaatgt tttcgccgag gaagcgcgtg tcaacggtcc ggactttgac taccgcatcc
      901 atgattcaac tcccggccca gccattcaaa tgggcagctt ctgcaccatg gagctggaaa
      961 aagaatggga cctcgccgcc tggtatgcac aataccggat gccggcaatg gcgagaatgc
     1021 cgggctccat caataccagg aaattggtgt cggtcgcggg ctgggccaag catgctgtga
     1081 tatatgagtt tatttcactc gatgcccgcc aggaacattt ccaaaatcat gaatcgctgg
     1141 ccatggatga aaccgtctgg accaacaaaa taatcaacta cacaattcat gcgccgggca
     1201 gccccagcgt cggtcgccgc atctggccgc cagtcaaaga ttaagttaaa taggagaaac
     1261 taactaatgt cactgattac aatccccacc gacgacgagg cgaatcctct gcaaaagtcg
     1321 atgttcgagc attccaaaaa gattctcggg cgggtcgcta atgcggttcg cgtcggctcg
     1381 catacgccga agctgatgca gtcgttgttc ggctttattg tatcatcttt gcgtcaggaa
     1441 attaccggaa acctgccggt acggacgaaa tgtctaacga tcttaaaaac ctcgacgctc
     1501 aacggctgcg cctattgaac aggccataac gaaacgctcg gtcgagcgtt aggtttcagc
     1561 gaagagctga tggcggaaat tacgggtgac tatttaaact cggacagctt cacggcagaa
     1621 gaaaaagccg ccatgcgctg ggccgaagtg atgactaaca agctttacca aggctcaccc
     1681 ggcaatccgc cgcagcatca tgcagcgctg gaggagctta agaaatatta caatgacgcc
     1741 caggtgatcg aattatccat ggtgtccggc ttttttaatt tctggaaccg gttcaccgac
     1801 attctggaaa ttgacatcga gcaaggcgcc ctgatggatg ccttctcacg ctcgaccaaa
     1861 atcgatcccg atgatttcac tgcctatatg cgggattgct ggtggaacga tggtaaagaa
     1921 acgtcataaa ggaaaagtag catggtaaaa gtcaaagaat ttccggatgg cgcccgcgag
     1981 gaattcctca atcgcgatat gcccatgttc gagggaaccc ctctcctgcc cggaccaccc
     2041 ttggctgagc gccgggttgc gttgatctcg actgccggcc tgcaccgcct ggtgtcggtg
     2101 agtaccgcat cattcctaga gtaagaataa gggatatacc gtgaccaatg ggaaaacaga
     2161 cgttacagta gaatttccga atgaggaacg taggggtaga aaaaaaagac agtagaaata
     2221 ccccctttgg aaacgcaaac atcacctctg ccaatctcaa aaaacctgtt gcaccttgag
     2281 gttttatctt cacactcagt gtcagcatct aaacaatcca aaggaatttc agcaatggca
     2341 tggaacaccc tcgactggct cgatctgatg ttgcgctggt ttcatatcat gggcggaatt
     2401 tcctggatcg gcggctcgct ctatctgctg tggctcgacc ggatctttgc agaccccgaa
     2461 cgtgcggcca agggtgagca tggggagccc tggatgattg atcaggccgg ctcgctgctg
     2521 gtcgagaagt tgaaacttga acccgacggg ctgaccaaga cccacatctg gtttaaacgc
     2581 gagaccatac tcacctgggt cagcggcatt ttgctgttgc tcatggtcgc ccctttgccg
     2641 ggcagcctgc tcaccggttc cggcggccaa ccgatcaacg ccttcaccag tgccgccatt
     2701 gttgttgctc tgctggcctt gtcctggttt tgctacgatt tgctatggcg gttaagcctg
     2761 agccggaata ctgccctgct gttgaccctt tccttaggcc tattta
//
LOCUS       DASCNL010000633         1267 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001302346, whole genome shotgun sequence.
ACCESSION   DASCNL010000633 DASCNL010000000
VERSION     DASCNL010000633.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001302346"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="QF359_08465"
     CDS             <1..299
                     /locus_tag="QF359_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HJO86979.1"
                     /translation="ELAGLSPDIAEQIEIIGLYSGYMDRQETDIRAFRADESLIIPED
                     IDFRSIGGLSNEICTKLEEVRPTTLGAAARISGVTPAALTALLGFVRRRARNAA"
     gene            341..1009
                     /gene="rsmG"
                     /locus_tag="QF359_08470"
     CDS             341..1009
                     /gene="rsmG"
                     /locus_tag="QF359_08470"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HJO86980.1"
                     /translation="MDVLTAAGFKNSIDVSRETLDRLSIYVDLLNKWQKSINLVGPKT
                     VADVWRRHILDSAQLFSYIENRDNLVFDLGSGAGFPGLVLAIMGAKNVVLMESNQKKC
                     SFLGEVIRQTACSAKVFNGRIKDYPEQKTAKYITSRALAPLDQLCAWSYPLLVPKGKC
                     LFLKGETYKQELTLCQKKWNIEVQIHPSLIDLDKDGDGDKDVLLQNLQGVLIELGKLS
                     PRDG"
     gene            1002..>1267
                     /locus_tag="QF359_08475"
     CDS             1002..>1267
                     /locus_tag="QF359_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJO86981.1"
                     /translation="MDNEVNSQINISTEQKPRIIAVANQKGGVGKTTTTINLATALAA
                     ARKRVLLIDLDPQGNASTGLGIERVDRLVNAYQVIIGEVTIDEA"
BASE COUNT          352 a          271 c          302 g          342 t
ORIGIN      
        1 cagaattggc ggggctctcg cctgatatcg ctgaacaaat cgaaataata ggcctgtatt
       61 ccggctatat ggatcgtcag gaaaccgata ttcgtgcttt tcgtgctgat gaatcgctga
      121 ttattccgga agatattgat tttcgttcta ttggcggctt gtccaatgaa atctgcacta
      181 aactcgaaga agtgcggcca acaaccctcg gagccgcggc tcgtatatcc ggcgtaactc
      241 cggctgcact tactgcttta ctaggctttg tgcgccgtcg cgcccgcaat gctgcttaat
      301 ttaagcgcga tgtttcacgt ggaatatatg ccattctaag atggatgttt taaccgctgc
      361 agggtttaaa aatagtatcg atgtttcacg tgaaacactc gatcgattgt caatctatgt
      421 cgaccttctc aataaatggc aaaaaagcat aaatctcgtc ggtcctaaaa ccgtggcaga
      481 cgtatggcgt cgccatatat tggattctgc gcaactcttt tcttatattg aaaatcgcga
      541 taatttggtc tttgatttgg gcagtggtgc cggctttccg ggtttggtcc ttgccattat
      601 gggcgcaaaa aacgtggttc tgatggaatc aaaccagaaa aagtgcagtt ttttgggtga
      661 ggttatccgt caaacagcct gttcagcaaa ggttttcaat ggccgtatca aagactatcc
      721 cgagcaaaaa acggcgaaat atattacttc ccgggctctg gcgccgctcg atcaattatg
      781 tgcttggagc tatccacttt tggtgccgaa gggaaaatgc ctatttctaa aaggtgaaac
      841 atacaaacaa gaattgaccc tgtgccaaaa aaagtggaat atagaggttc aaattcatcc
      901 atcactcata gatttagata aagatgggga tggcgacaaa gacgttcttc tacagaatct
      961 tcagggggtt cttatagaat taggaaagct atcaccacgt gatggataat gaagttaaca
     1021 gccaaataaa tatttctacc gagcagaaac cccgaattat agcggttgcc aaccaaaaag
     1081 gcggcgtcgg taaaacgacg acgacaatta atttggcaac tgccttagca gcagcccgca
     1141 agcgtgtttt gttgattgat cttgaccccc aaggtaatgc cagcaccggt ttggggattg
     1201 agcgggtgga ccgtttggtc aacgcctatc aagtgatcat tggcgaagtg acaattgacg
     1261 aagctat
//
LOCUS       DASCNL010000634         4602 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001305645, whole genome shotgun sequence.
ACCESSION   DASCNL010000634 DASCNL010000000
VERSION     DASCNL010000634.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4602)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4602)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4602
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001305645"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="QF359_08480"
     CDS             complement(<1..545)
                     /locus_tag="QF359_08480"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO86982.1"
                     /translation="MGVLDHIWLGVVAVFTADPIFTLAGLPFSTTIMMVVLGFLGGIV
                     VGATPGLGGPFAMAISLPILISIFGFEPDALLPVLGFLVGIMKGSTVGGAVPAILFNT
                     PGTPDSLMTTLDGYPLTKKGKPGKALRIAHFSSVSGDTFSDIVLITCAPFLAILVEKF
                     LDFPEKAALIILSLAFVSAVVG"
     gene            complement(545..1126)
                     /locus_tag="QF359_08485"
     CDS             complement(545..1126)
                     /locus_tag="QF359_08485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86983.1"
                     /translation="MQNEKWTVGLAVFLVIAAAATLFIWIPNDIETGVVETFRRRVTI
                     GDAMAPTMVAAALLVVSILMGVTAYFGGRQQKHAAKAGLDKQSFTFLLRLTIAVGLGL
                     GLMVYTGPVIVDIINSFGGEIGTYRHLKAAFPYKYLGYVLGGFFMVFGLIRVVENRFS
                     ASAAWASIIAVLVLTILYDVPFENLLLPPNGDH"
     gene            complement(1172..2137)
                     /locus_tag="QF359_08490"
     CDS             complement(1172..2137)
                     /locus_tag="QF359_08490"
                     /inference="COORDINATES: protein motif:HMM:NF015366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HJO86984.1"
                     /translation="MSKVTKITTWLTVAGFAAAAFMITTTAQAEWKPKGPITILIGFS
                     AGGGTDTQARLIASELQKRKGWKIIPQNMPGKAGGIMARKLKNMPADGLSIGMAVTES
                     FGYAMLAQKKAGYKVSDFTYIATTTSSQMGIVAKTSKGWKTFKDVIAVAKKGKVFKFA
                     GMSPKHADINFLIEKKFGVKFNTVILRGGRKVMNAITAGDVDLGYGAGIQAKAVLAGQ
                     MVNLASGLAERIRISPNAPTLMELGIPHDIAARFLFVGPAGMPADARKALADGIGSII
                     NDKSTKASQFVSKRYGGPEVITGKKLDDMIAANIAESKMLMKVMN"
     gene            complement(2227..4530)
                     /locus_tag="QF359_08495"
     CDS             complement(2227..4530)
                     /locus_tag="QF359_08495"
                     /inference="COORDINATES: protein motif:HMM:NF023649.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3604 domain-containing protein"
                     /protein_id="HJO86985.1"
                     /translation="MTGENSNIVDSTLVGEVWPAAAPAEDPVLYGQAEISPEGAFEVR
                     SYQTFTLTYTVGRFGLDDNGSIRVVFRFFGDWGGLQMDDPKAPNYVTAVTNLGTKPQL
                     EFRATGGSRPWFKALTARISGGYLSEGDTITITFGDTSGGSPGFKMQTFVESGFEFKV
                     LVDACAVGHYVPILDKPAISIVPGSPAEWRAAISTLRRPNETFQLGIKAEDEWGNPSD
                     QVEAKLRIEPSLPVKNLPATATFNRGQKSLLFENLSVTEEGELRLEVFDAENDNLLCE
                     AGPMIIEDGPFGGYWGDLHGQSGETIGITNSREYFDFARDLAFLDVISHQANDFQVNN
                     AFWKYLNELTAAYHADGRFVTFPGYEWSGNTSVGGDRNIYFREEGRQIRRSSHALLPD
                     QSDIDTDANDARLLFEALKDEDCLAYAHVGGRYADIEFAHDAKIETAMEIHSAWGTFE
                     WLLTDGFPLGHRSGVVCNSDGHKGRPGASYPGASMFGAYGGLTCFFADELSRDGIFDC
                     LKKRHHYGTTGNRLHLTVEAEFKGGGKLFDLDPNVYGEAKFTDSTSAMMGDIVQTDDT
                     SVTLKVVAKSPTPIERIEIRNGIDVVKTLRGYSKNDLGKRYRVIWSGAEYRGRSRNTS
                     WIGNATFKNAKIKRMEKINAWNHERLLEVDGDTGVKWDAITTGNYGGFDVWLDNNENV
                     ELSIETNHGSLTCNLSEMGINDTILDCGGLKRRLKVMRLPEVNSHRELFGEIEIDLSG
                     SGDNQLWVCVTTEDGFQAWSSPIFVFN"
BASE COUNT         1184 a         1196 c         1117 g         1105 t
ORIGIN      
        1 ccgacgacgg cagagacgaa ggctagcgat aaaataatca gcgctgcttt ttcgggaaaa
       61 tcgagaaatt tttcgaccag aatggccaga aaaggcgcgc aggtgatgag aacaatgtcc
      121 gagaatgtat cgccagagac agatgaaaaa tgggcaatac gcagggcttt gcccggttta
      181 ccttttttgg ttaagggata gccgtccaag gtcgtcatca atgaatctgg cgtgcccggt
      241 gtattgaaca aaatcgctgg taccgcgccg ccgacggtcg agcctttcat gatgccaacg
      301 agaaaaccca aaaccggcag cagcgcatct ggttcaaagc caaaaattga aatcaaaatc
      361 ggcagggaga tcgccatggc aaagggacca cccaagcccg gcgtcgcacc gacgacaata
      421 ccacccagga agcccagcac caccatcatg attgtggtcg agaagggcag tccggcgagc
      481 gtgaatatgg gatctgctgt gaagaccgca acaacgccca gccaaatatg atcaagcacg
      541 cccatcagtg atcaccatta ggcggcaata ataaattttc aaacggtaca tcgtaaagaa
      601 tagtcaggac caaaactgct atgatggacg cccaggcggc gctggcagag aagcggtttt
      661 ccaccacccg gattaggcca aagaccatga agaagcctcc caaaacgtag cccaaatatt
      721 tatagggaaa tgcagctttc agatgccggt aagtgccaat ctcgccgcca aagctgttaa
      781 tgatatcgac gatcacaggg ccagtataaa ccatcagccc tagcccgaga ccaacagcaa
      841 ttgtcagtct gagaagaaaa gtaaaacttt gtttgtccag ccctgccttt gcggcatgct
      901 tttgttgccg gccgccaaaa taggccgtca cacccattaa tattgaaacc accagtagcg
      961 ccgcggccac catggtcggg gccattgcat caccaatggt cacccggcgg cggaaagttt
     1021 cgaccacgcc ggtctcaatg tcgttcggaa tccaaataaa aagtgttgcc gcagcagcga
     1081 taacgagaaa aacagccagg ccaacagtcc atttttcatt ttgcatggga aaataaaagg
     1141 gccgggtcca aaaacccagc cctctatatt cttagttcat gactttcatc aacatttttg
     1201 attcggcgat attggcagca atcatatcgt caagtttttt gccggtgata acttctggtc
     1261 caccataacg cttggagacg aattgcgaag ccttggtgct tttgtcattg ataatgctgc
     1321 caatgccatc ggcgagggct ttgcgggcat cagccggcat accggctggt ccgacaaaca
     1381 agaacctggc agcaatatcg tgcggaatgc cgagttccat caaagtcggc gcatttggag
     1441 aaatgcgaat gcgttcggcc aagccggagg cgagattgac catttgcccg gccaagacag
     1501 ctttggcttg aataccagca ccgtaaccaa gatcaacatc accggcggtg atggcgttca
     1561 tgactttgcg gccacctcgc agaatgacgg tattaaattt aacgccaaat ttcttctcaa
     1621 tgagaaaatt gatatcggcg tgtttcgggc tcatgccggc aaatttaaac actttgcctt
     1681 tttttgccac agcgataacg tctttaaagg ttttccagcc tttgctggtt ttagcgacga
     1741 tacccatttg tgagctggtg gtggtggcaa tataggtgaa atcactcact ttatagccgg
     1801 ctttcttttg cgccagcatg gcataaccga atgattcagt gacggccatg ccaatgctca
     1861 aaccatcagc cggcatattt ttaagcttgc gggccatgat accgccagcc ttgcctggca
     1921 tattctgcgg aatgatcttc caacctttac gtttttggag ttccgacgcg ataaggcgag
     1981 cttgcgtatc agtaccgcca ccggcggaaa aaccgatcag gattgtaatc gggcctttgg
     2041 gtttccactc tgcttgcgcg gttgttgtga tcataaatgc agcagcggca aaacctgcaa
     2101 ctgtcagcca tgtcgttatt tttgttacct tggacattat aagtctccct tattgatcgt
     2161 tgagtttatt tagttgttgg tgcagcctta tcattaattt gttaattagt taaagaaatt
     2221 tgttaattag ttaaagacaa aaattggact gctccaggcc tggaaaccgt cttctgtggt
     2281 tacacatacc cacaactggt tgtctcctga tcccgataaa tcgatttcaa tttcaccgaa
     2341 aagctcacga tgagagttaa cttccggcag gcgcataact ttaagccttc ttttcaagcc
     2401 accgcaatcg agaatcgtgt cgttgatacc catttcagat aaattacatg ttagcgagcc
     2461 gtgattcgtt tcaatggata gttccacgtt ttcgttgttg tcgagccaga catcaaagcc
     2521 accataattg ccggtggtga tggcatccca cttaacacca gtatcgccat cgacttcaag
     2581 caatcgctca tgattccacg cattgatttt ttccatgcgc ttgatcttag catttttgaa
     2641 cgtcgcgtta ccgatccaac tggtattacg gcttcggccg cgatattcag caccgctcca
     2701 gatcacccgg tagcgcttgc caagatcgtt cttactatag ccccgcaaag ttttaacgac
     2761 atcaatgccg ttgcgtattt caatacgttc aatcggcgtt ggtgattttg ccacgacttt
     2821 aagagtaaca ctggtatcat cggtttgtac aatgtcgccc atcatcgccg aggtgctgtc
     2881 ggtgaatttg gcttcaccat agacattggg atcgagatca aacagcttac ccccgccctt
     2941 aaactcggcc tcgaccgtta agtggagccg gtttccggtg gtgccatagt gatggcgttt
     3001 tttaagacaa tcaaaaattc catcccggct tagctcatcg gcaaaaaaac aggtgagtcc
     3061 gccataagcg ccaaacatcg aggccccggg ataactggca ccggggcggc ctttatgacc
     3121 gtcactgtta cagacaacgc cggagcggtg accgagtgga aagccatccg tcaacagcca
     3181 ttcaaaggtg ccccaggccg agtgaatttc catggcggtt tcaatctttg catcatgagc
     3241 aaattcaata tccgcatagc gtccaccgac atgggcataa gccagacagt cttcatcttt
     3301 aagcgcttca aagagaaggc gcgcatcgtt ggcatcggtg tcgatgtctg attgatccgg
     3361 cagcagcgca tgggaagagc gcctgatctg gcggccttct tcgcggaaat aaatgttgcg
     3421 gtcgccgcca accgaggtat tgcctgacca ctcatagccc gggaaggtga caaagcggcc
     3481 gtcggcgtga taggccgcag tcaattcgtt gaggtatttc caaaacgcgt tgtttacctg
     3541 gaagtcgttg gcttgatggc tgatgacatc gaggaaagcc agatcacggg caaagtcaaa
     3601 atattcccgg gaattggtga taccgatggt ttcaccgctt tggccatgca agtctcccca
     3661 atagccgcca aaaggaccgt cttcgatgat catgggcccg gcttcacaca gcaaattgtc
     3721 attctcagca tcgaaaacct ctagccgcaa ttcgccttct tcggtgaccg ataaattctc
     3781 gaacaacagt gatttctgcc cccggttgaa ggttgccgtg gcaggcagat ttttcaccgg
     3841 caagctgggc tcaatccgca acttggcttc aacttgatca gacgggttgc cccactcatc
     3901 ttcagctttg ataccgagct ggaaagtctc attgggccgc cgcaaggtcg agatggccgc
     3961 ccgccattcc gcaggcgatc cgggcacaat cgaaatcgcc ggcttgtcca ggatcggcac
     4021 gtagtgaccc accgcgcagg catcgaccag cactttaaat tcaaagccgc tttcaacgaa
     4081 agtttgcatt ttaaaacccg gtgagccacc ggaagtatca ccgaaagtga tggtgatggt
     4141 atcgccttcg gataaatagc cgccggaaat tctcgccgta agcgctttga accacggtcg
     4201 cgacccgccg gtcgcgcgaa attcaagctg tggcttggtg ccgagattgg tgaccgcggt
     4261 aacgtagttg ggcgctttgg gatcatccat ttgcaagccg ccccaatcac caaaaaagcg
     4321 aaacaccacc cggatactac cattatcgtc aaggccaaac cgccccactg tataagtcag
     4381 cgtgaaagtc tgataagagc gtacctcaaa cgcaccttcg ggagatatct cggcttggcc
     4441 atacagcacg ggatcttcgg caggtgccgc agcaggccaa acttcgccga ccaaggttga
     4501 atctacaatg tttgagtttt cgccagtcat agtgccttac actttttccg atttttgtaa
     4561 taagtcctca ataacacctt cgagtttggt tagcattttt gg
//
LOCUS       DASCNL010000635         4192 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001307250, whole genome shotgun sequence.
ACCESSION   DASCNL010000635 DASCNL010000000
VERSION     DASCNL010000635.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001307250"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1142)
                     /locus_tag="QF359_08500"
     CDS             complement(<1..1142)
                     /locus_tag="QF359_08500"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO86986.1"
                     /translation="MIAINDLQMFAASLEERGLLHRIKAPVDRDLELAHVAVMGERAK
                     GPALIFDNVIGFDIPILISAFTSPSRMAVALGVEPGPSMPELSRLWMERTTAGLIPPV
                     TVNNAMVAKNQLTGDDVDVNHFPAPQLYPKDGGRFFGTTAYLVCRDPETGWVNLGTYR
                     MQILEPNRVGVQFLQGKDADHILKKYKARGEKMPAAAVLGGDPLLFLASATFIGTGIS
                     ELDIVGALRQKPVEVWQSDLTGLPLPAGAEIVLEGHIDPDDPCHEGPLGEYTGYYTHD
                     HWSKPALKIQRILHRDQPLFWSCTVGKPVNDIHMLQCLSRTGGIWHDLETMKIPGIES
                     VYVPPEACGWFWTIVSIRQMYPGHANQVGNAVLASSGGHHATKGVIV"
     gene            complement(1221..2867)
                     /locus_tag="QF359_08505"
     CDS             complement(1221..2867)
                     /locus_tag="QF359_08505"
                     /inference="COORDINATES: protein motif:HMM:NF017722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HJO86987.1"
                     /translation="MLQFSEPPRVEINPNECVPLVAMVYFKANEPATAEIEIDDGRKK
                     RVVNYGPDKNPKNGLPIIGMRADTEHKISVTARDESGKSSDTVELSYRTPHLPVDAAA
                     IPRFSLETSNAEDMEPGFTLLSIRRRPVMRAIWMTQKQAVFQNRWSLLVAIDEEAEVV
                     WYYIADSRIAGVHQLQNGNLFFHHVNFRSIEMDMCGNIINQFHATNRPWGPVENSIGI
                     EAESLHHQPHEMPNGNFLALTANAKEIENYYTSEEDPDAPRATQKVVGDTIVEFTPEG
                     DIVWNWNTFDYLDPMRIGYQLLDTYWHTRGFPNHLDWTHGNGVTYDHHDDSIIVSLRH
                     QDAIIKIDRKTKEIIWILGDPAGWEGELKDKLLKPTHDLRWHYHGHNPRVTGENQFVM
                     YDNGICRALPFHGPSAAPHECFSRAIEYQIDPDKMEVSEIWVSSSDESEDRVISWAMG
                     DAHRLPQTDNMLVIDSFCTPVGPALNRLETVTISDLTWNSWNRSEWHPNDLATWARIR
                     EMKRDGDREIVFQVRVDNEHDIVGWEVFGGARVKSLYQAT"
     gene            3173..>4192
                     /locus_tag="QF359_08510"
     CDS             3173..>4192
                     /locus_tag="QF359_08510"
                     /inference="COORDINATES: protein motif:HMM:NF025627.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004062 - aryl sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HJO86988.1"
                     /translation="MRHTTVGVLEFDRARATPGVTIITPLQGKATYLVGMKGEVLHQW
                     DHPIKPGSYAYLLPSGNLLWAGETIEGPSPGGGKGGLLREYDWDGQVVWEYQDDAQHH
                     DFCRLQNGNTLYIGWEKMPKEAQARMIGAEPGSEDDSGNTWSDYLREVSPAGETVWEW
                     HAHTDMEIEEYPLHIMSTRKEFLHCNACTELPNGDIMLSFRKNSMIIVVDKKSKKVSK
                     QWQDNAWGQQHDCTLLENGNVLFFANGIHVPGGIFYSKVIEFDWDSGDEVWSYTGWPL
                     WSLFSPNISGAQRLASGNTLICEGLHGRIIEVTPEGEIVWEFVSPWFIKTPRGPDSSI
                     FRAYRY"
BASE COUNT          986 a         1032 c         1102 g         1072 t
ORIGIN      
        1 acaataaccc ctttggtggc gtgatgacct cccgaggaag ccaacaccgc attacccacc
       61 tggttggcgt gacccggata catctggcgg atcgagacga tggtccagaa ccagccgcag
      121 gcttcgggag gcacatagac gctttcgata cccgggatct tcatggtttc caaatcgtgc
      181 cagatgccgc cagtgcggct tagacattgc agcatatgga tatcattgac cggtttgcct
      241 actgtgcagg accaaaataa cggctggtcc cgatgcagaa tgcgttggat tttaagggcc
      301 ggcttactcc aatggtcatg ggtgtagtag ccggtatatt cgcccagtgg tccttcgtgg
      361 cacggatcgt cgggatcgat atgtccttcc aacacgatct cagcgccggc cggtaggggc
      421 aacccggtaa gatcggattg ccagacctcg actggcttct gccgcaaagc gccgacgatg
      481 tctaattcgc tgataccagt tccaatgaaa gtggctgagg ccaggaacaa cagggggtcg
      541 ccaccgagca ccgctgccgc cggcatcttc tcgccgcggg ctttatattt tttcaaaata
      601 tgatcggcgt cctttccttg taggaattga acccccaccc ggttgggttc cagaatttgc
      661 atgcggtagg tgccgagatt aacccagccc gtttcaggat cgcgacaaac taaataagcg
      721 gtggtgccga agaaacgtcc gccatccttg ggataaagtt gcggcgccgg gaaatggttt
      781 acatccacat catcgccggt cagttggttt ttggcgacca tcgcgttgtt taccgtgacc
      841 ggcggtatca gcccagcggt tgtccgttcc atccaaagtc ggctcaattc cggcatcgac
      901 ggtcccggct ccacacccag cgccaccgcc atgcgtgacg gcgaggtaaa ggcgctgatc
      961 aatatcggga tgtcgaaacc gatgacgtta tcgaaaatca gggccggacc cttggcgcgt
     1021 tcacccatta ctgccacatg cgccagttcc aggtcccggt cgactggcgc cttgatccgg
     1081 tgcaacagac ctcgctcctc gagtgaagct gcaaacatct gtaaatcatt gatagcgatc
     1141 atttggctct cctggagaat tttgattcaa ttgaaacacc gtaagctgtt acagataata
     1201 gtacttacgt ctaatagtac ctacgttgct tggtaaagac ttttcactcg tgccccccca
     1261 aacacttccc agccgacaat gtcgtgttca ttgtcaacgc gtacctgaaa cacaatttcc
     1321 cgatctccat cccgcttcat ttcccgaatg cgggcccagg tggcgaggtc attgggatgc
     1381 cattcggacc ggttccagga attccaggta aggtccgata tggtaacggt ctccaagcga
     1441 ttcagcgccg ggcccaccgg tgtacagaag gaatcaatca ccagcatatt gtccgtctgt
     1501 ggcaacctat gggcgtctcc catggcccag gaaataaccc ggtcctcgga ttcatccgat
     1561 gaagaaaccc aaatctcgct gacttccatc ttatcgggat caatctgata ttcgatggcg
     1621 cgggaaaagc attcgtgagg cgccgccgat ggcccgtgaa aagggagcgc ccggcaaata
     1681 ccgttatcat acataacgaa ttggttctcg ccggtcaccc gcggattgtg tccgtgataa
     1741 tgccagcgca gatcatgggt gggtttcagg agtttatcct tcagctcacc ttcccacccc
     1801 gccggatcgc caagaatcca aatgatttct ttagtcttgc ggtcaatttt tatgatggcg
     1861 tcctgatggc ggagagaaac gataatgctg tcatcatggt gatcataggt aacgccattg
     1921 ccatgggtcc aatcgagatg attgggaaat cctctggtat gccagtacgt atcaagcaat
     1981 tggtagccaa tccgcatagg gtcgagataa tcgaaagtgt tccaattcca gacgatgtcg
     2041 ccctctgggg tgaactcgac gatagtatca ccaacaacct tttgtgttgc ccgcggcgca
     2101 tccgggtctt cttcgctggt atagtagttc tcaatctctt tggcattggc agtaagagcc
     2161 agaaagttgc cgttaggcat ttcatggggc tggtgatgca ggctttccgc ttcaataccg
     2221 atggagtttt ctaccggccc ccagggccgg ttggtggcgt ggaactgatt gatgatattt
     2281 ccgcacatat ccatctcgat ggagcggaaa ttaacatggt gaaaaaagag gttgccgttt
     2341 tgcagttggt gaacgccggc gatgcggctg tcggcaatat aataccaaac gacttcggct
     2401 tcttcatcga tagccaccaa caagctccaa cggttttgaa acacagcttg tttttgagtc
     2461 atccagatgg cgcgcatcac cggacgtcgg cgtatggaga gcaaagtgaa gcccggctcc
     2521 atgtcctctg cattcgaagt ttctagcgaa aagcggggaa tggccgcagc gtcaacgggc
     2581 aggtgcggcg tgcgataaga caattcaaca gtatctgagc ttttgcccga ttcatctcgt
     2641 gccgtcacgg agattttatg ctcggtatca gcgcgcatgc cgataatcgg tagaccgttt
     2701 ttggggtttt tgtcaggtcc gtaattgacc actcgtttct tgcgcccgtc gtcaatttct
     2761 atttccgctg tagcgggttc gttggcttta aaataaacca tagccaccaa tggcacgcac
     2821 tcattaggat ttatttccac ccgcggtggt tcgctgaatt gcagcatgat gattatttct
     2881 cctgttttgg aaatgacttc aggtttttct aaattttttc cacattcccc attgtcctcg
     2941 acggatggtt tcacccttta ctttgccatc ttagttattg ctgtaagcct aaagtgattc
     3001 gacgttttgc cgattattct tcgcgtaata attggtatag taaagccatt tggtaagttc
     3061 gtacatctat gcatttatga agcccttgat gggtgtgaaa ccgtcatgcc attagataga
     3121 aggcgtttcg gcaatcttta catatttata tgggcagact atcgtgtaaa ccatgaggca
     3181 taccactgtt ggagtattgg aatttgaccg cgcccgggcc acaccgggcg ttacaattat
     3241 tactcccctt caaggcaaag cgacctattt ggttggcatg aaaggtgagg tgcttcatca
     3301 atgggatcat cccattaaac caggcagcta tgcctatctg ttgccaagcg gaaacttgtt
     3361 gtgggcaggt gagacaatcg agggaccaag tcctggcggc ggtaagggtg gcctactgcg
     3421 cgagtatgat tgggatggcc aggtcgtttg ggaatatcag gatgatgccc aacaccatga
     3481 tttttgccgt ctccagaacg gtaatacact ttatatcggc tgggagaaaa tgccgaagga
     3541 agcgcaggcg cgaatgattg gcgctgaacc gggtagcgaa gacgatagtg gcaatacttg
     3601 gagcgattat ctgcgtgaag tatcgcccgc tggcgaaacg gtatgggagt ggcatgctca
     3661 caccgatatg gagattgaag aatacccttt acacatcatg agtacacgaa aggagttcct
     3721 gcattgcaat gcgtgtactg aactgccgaa cggcgatatt atgctgagct ttcgtaaaaa
     3781 cagtatgatc attgtggtcg ataaaaagag caaaaaagtt tctaagcaat ggcaggataa
     3841 cgcttggggg caacagcatg attgcacctt gttggaaaac ggtaacgtgc tattttttgc
     3901 aaatggtatt cacgtccctg gcggtatttt ttattccaaa gtcattgagt tcgattggga
     3961 tagcggggat gaagtatggt cttataccgg ctggccgcta tggtcgctgt ttagtcccaa
     4021 tattagcggt gcgcaaagat tggcttccgg caatacgctg atctgcgaag gcttgcatgg
     4081 tcggattatt gaagtaacgc cagagggaga aattgtctgg gagtttgtta gtccgtggtt
     4141 cataaaaaca ccgcgtggac cagatagtag tatctttcga gcttatcgct at
//
LOCUS       DASCNL010000636         1330 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001312320, whole genome shotgun sequence.
ACCESSION   DASCNL010000636 DASCNL010000000
VERSION     DASCNL010000636.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1330)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1330)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001312320"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..962)
                     /locus_tag="QF359_08515"
     CDS             complement(<1..962)
                     /locus_tag="QF359_08515"
                     /inference="COORDINATES: protein motif:HMM:NF024646.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prenyltransferase/squalene oxidase
                     repeat-containing protein"
                     /protein_id="HJO86989.1"
                     /translation="MQKSIENFRTAKSAGQHSTLDEVIQRAEMRLLDCQSEDGHWVFP
                     LEADVTITAEYILLNHYLGEINDEVETKLANYIRRIQSEHGGWPLYHAGEFNVSASVK
                     AYFALKLSGDDPEAPHMTKARDAILAHGGAKEANVFTRITLALFGLVPWRATPVTRIE
                     VLFAPKWFPLHINKVSYWTRTVTVPLLILTALRPQAKNPRNVSLDELFTKSRFEEDYR
                     IKNPTGHWLGSLMIALDNLARTFGNLIPIYFVNRGIDRAMNFITERLNGEDGLGGIFP
                     AMANALMAFDALGIPKDHPNVVTTRQAIEKLLIFQDDEAYCQPC"
     gene            complement(965..>1330)
                     /locus_tag="QF359_08520"
     CDS             complement(965..>1330)
                     /locus_tag="QF359_08520"
                     /inference="COORDINATES: protein motif:HMM:NF012705.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HJO86990.1"
                     /translation="LTNILRDIYEDAERDHVYLPADLLAHHGIANSSVSDIIEHPGIV
                     EVCIELARRAEENYQKASSIIDHCDKKLIQPAIIMMRSYHQLLNLLERRGWEHLDVPV
                     KVSKIWKILLTVRILIFGS"
BASE COUNT          355 a          304 c          310 g          361 t
ORIGIN      
        1 aagcaaggtt ggcaataggc ctcatcatcc tggaaaataa gtaatttttc gatggcttgg
       61 cgggtggtca cgacgtttgg atggtctttc ggaatgccca aagcgtcaaa ggccatcagg
      121 gcattggcca tggctggaaa aataccgccg agcccatctt caccatttaa tcgttcagtg
      181 atgaagttca ttgccctgtc gatcccgcga ttgacaaaat aaattggaat taaatttcca
      241 aacgtccgag ccaaattatc aagcgcgatc attaaactgc caagccaatg accggtcgga
      301 tttttgatcc ggtaatcttc ctcaaagcga gatttggtaa aaagctcatc gagcgaaaca
      361 ttgcgcggat ttttggcttg aggtcggagc gcggttaaga tcaatagagg caccgtaacg
      421 gtacgtgtcc aataggaaac tttattgatg tgcagtggga accatttcgg tgcaaacaag
      481 acttcgatgc gagtcaccgg cgttgcccgc cacggaacca atccaaataa cgccaaagtt
      541 atgcgcgtaa acacgtttgc ttctttagcg ccgccatgag ctaaaattgc gtctcgcgct
      601 ttggtcatat gaggtgcctc cggatcatcg ccagaaagct ttaaggcgaa ataggctttg
      661 actgaggcgc tgacattaaa ttcacccgca tgataaagtg gccagccgcc atgttcgctc
      721 tgaatgcggc ggatgtaatt tgcaagtttc gtttccactt catcgttgat ctcgcccagg
      781 taatgattga gcaaaatata ttcagccgta atggtgacgt ctgcctccag gggaaatacc
      841 caatggccat cttcggattg gcagtcaagt agacgcattt cagctctttg gatcacctca
      901 tccaaagtcg aatgctggcc tgcggatttt gcggtgcgga aattttcgat gctcttttgc
      961 attattaact gccaaaaatt agaatgcgca ctgtcaaaag tattttccat atttttgata
     1021 cttttacggg aacatcaagg tgttcccagc cacgacgttc caataagttc aaaagctgat
     1081 ggtaacttct catcattatg attgccggct gaataagctt cttgtcacag tgatctataa
     1141 tcgatgacgc tttttgatag ttttcttctg cccgtctagc caattcgata cagacttcaa
     1201 ctatcccagg atgctcgata atatcactca cagaggagtt agcaatgccg tgatgggcga
     1261 gtaggtcagc cggtaaatat acatgatcgc gttcggcatc ttcataaata tcgcgcagaa
     1321 tattggtcag
//
LOCUS       DASCNL010000637         1695 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001318687, whole genome shotgun sequence.
ACCESSION   DASCNL010000637 DASCNL010000000
VERSION     DASCNL010000637.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001318687"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1276
                     /locus_tag="QF359_08525"
     CDS             <1..1276
                     /locus_tag="QF359_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HJO86991.1"
                     /translation="LMEQMFKLTELETRFSLNMNVLDAYNTPKVMNLREVLTAFLDHR
                     LKVLIRRTKFRLGKIDARMEVLEGYLITYLNLDEVIRIIREADDAKKSLIKKFKLTEN
                     QAEAILNMRLRSLRKLEEIEIKSENDGLKKERADLNKLIKNKDLRWKKISSEISNIKK
                     QFSGKANPAYKRRTEITSAPKAIDIPVDAFIEKEPVTVICSEKGWIKAAKGHVNLTAE
                     VKYKEGDRGKFIFHAETTDKILLFGTNGRFYTISCDKLPGGRGFGEPVRLMVDLGNEH
                     DIVGLFLYKTEVKYLAASSTGRGFIVKSEDVMAQTKGGKQILNVKGEDEAAAICIIEG
                     DSVAVIGENRKLLLFPLDEIPEMTRGRGVILQRYKDGGLGDIKTFTMKKGLSWKTGDK
                     TRTETDLMAWQGKRAQAGRQPPKGFSRTNKFS"
     gene            1342..1500
                     /locus_tag="QF359_08530"
     CDS             1342..1500
                     /locus_tag="QF359_08530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86992.1"
                     /translation="MRQANTCLQPTLLLPAAVDNWLYKIVLALSGAALLTLSAKIQVP
                     FYPVPMTM"
     gene            1513..1689
                     /locus_tag="QF359_08535"
     CDS             1513..1689
                     /locus_tag="QF359_08535"
                     /inference="COORDINATES: protein motif:HMM:NF014669.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015225 - biotin transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015878 - biotin transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HJO86993.1"
                     /translation="MIIGMAFGWKLGGLTILAYLAEGAFRLPVFAGTPAKGIGLAYMA
                     GPTGGYLVGFYFPL"
BASE COUNT          474 a          380 c          420 g          421 t
ORIGIN      
        1 gctaatggag cagatgttca agctaaccga acttgaaacg cgctttagcc tgaacatgaa
       61 tgttctggat gcttacaata caccaaaagt gatgaattta cgcgaagtgc tgacggcttt
      121 tctcgatcac cgtttaaaag tgctgatacg gcggaccaag ttccgccttg gtaaaatcga
      181 tgcccgaatg gaagttctcg aaggctatct gattacctat ctaaatctcg atgaagttat
      241 tcgcattatt cgcgaggcag atgatgccaa aaagagtttg atcaaaaaat ttaaactcac
      301 cgaaaatcag gccgaagcca tcctcaacat gcgcctacgc tcattgcgca aacttgaaga
      361 aatagaaatc aagagtgaga acgacggtct caagaaggaa cgcgccgacc tcaataagct
      421 gatcaagaat aaagatttac gctggaagaa aatctccagc gaaatcagca atattaagaa
      481 acagttctcc ggcaaagcca accccgccta taaacgccgc actgagatta cttcagcacc
      541 taaggcaatc gacataccag ttgatgcctt tatcgaaaaa gaaccggtaa cagtgatctg
      601 ttcggaaaaa ggctggatca aggcggccaa aggtcatgtc aatctaacag ccgaagtgaa
      661 atacaaagaa ggtgatcgcg gtaagtttat ctttcatgcg gaaaccaccg acaagatatt
      721 actttttggc accaatgggc gcttctatac gatttcgtgt gacaaactgc cgggcgggcg
      781 gggttttggt gagccggtgc gtttgatggt cgatctcggt aacgaacatg atattgtcgg
      841 cttgttcctt tataagacgg aggttaagta ccttgcggct tcgagcacag ggcgcggctt
      901 tatcgttaaa tctgaagatg tcatggcgca aaccaaaggc ggcaagcaaa tcttgaatgt
      961 caaaggcgaa gatgaagcgg cagcgatctg tattatcgaa ggtgacagcg tcgccgtgat
     1021 tggtgaaaat cgtaagcttt tgctgttccc gcttgacgag ataccggaaa tgactcgtgg
     1081 ccgcggcgtt attcttcaac gctacaaaga cggcggtttg ggggatatca aaactttcac
     1141 catgaaaaag ggattatcgt ggaaaaccgg tgataaaacc cggaccgaga ctgatttaat
     1201 ggcctggcag ggtaagcgtg cccaagccgg ccggcaacca cctaaaggtt tctcacggac
     1261 caacaaattc tcttaaatct ttgaattttg tgatcgtcct gctatgaaat ggaaaacaac
     1321 tcttctcggg aacctaaagc tatgcgacag gctaatacat gcttacaacc gacgctgctt
     1381 ctgcctgccg ctgttgacaa ctggctctat aaaatcgtac tcgcactttc tggtgcggcg
     1441 ttgttaacgc tttcggcaaa aattcaagtg ccgttttatc cggtgccgat gacgatgtag
     1501 acatttgccg tactgataat tggcatggcg tttggctgga aactcggtgg tctgacaatt
     1561 ttagcctatc tggcggaagg cgcatttagg ttgccggttt ttgccggcac ccccgcgaag
     1621 ggtattggcc tcgcctatat ggcaggtcca actggtggat atcttgttgg cttttatttt
     1681 ccgctatgac agttg
//
LOCUS       DASCNL010000638         4093 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001319781, whole genome shotgun sequence.
ACCESSION   DASCNL010000638 DASCNL010000000
VERSION     DASCNL010000638.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4093)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4093)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4093
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001319781"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..979)
                     /locus_tag="QF359_08540"
     CDS             complement(<1..979)
                     /locus_tag="QF359_08540"
                     /inference="COORDINATES: protein motif:HMM:NF013707.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HJO86994.1"
                     /translation="MLETASDSAEKKGLSKSAMPIVKLAEHIVEIVSDSGEGAQRCGQ
                     SFASIAARSGNGIWTGEIIPAEIQPPARSTEGTSGNRIRVSSNPVTNGGDEADLVIAF
                     NEQVLLSRINANEIKLGSIILLENKWAAHPDTNIATAYAETLDHLHSDGYNILEIPME
                     VECLKHVPDAKRGKNMFVLGMLCSIYSLDLELGRQQVARIFAKKSDTIINANQILLEA
                     GRDWAADNLDIKYQIPAVKKNTPQIIVNGNTALSLGVLASGMQICAMYPITPATSASH
                     YLSEVFKKVGGLVHQAEDEIAACAFAVGASYAGKCAVTITSGPGYSLKQE"
     gene            complement(972..2513)
                     /gene="gltA"
                     /locus_tag="QF359_08545"
     CDS             complement(972..2513)
                     /gene="gltA"
                     /locus_tag="QF359_08545"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004355 - glutamate synthase (NADPH)
                     activity [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent glutamate synthase"
                     /protein_id="HJO86995.1"
                     /translation="MAKRTIRTIPQEQTPMPIQDAVERVSNFDEVTYGYEVADTLREC
                     ERCLYCPEPACIASCPVAIDIPGFIKKISTKDYRGAYDVISETNLLPAICGRVCPQED
                     QCEGVCPVGDTLKPVAIGRLERWVGDLAIAENWVNVPYMEPNGFKIGIVGSGPAGIAC
                     AAEMAKAGCDVTIYEALHLPGGVLRYGIPEFRLPNSVVDQEIENLKKLGVKIECNVLI
                     GRLFTIQQMVDEFGFDAIFIGTGAGYPKFMGIEGESLNGVVSANELLTRCNLMHAGEF
                     PSYDTPLHLGKRVAIIGAGNTAMDAMRVALRQGAEKVYCVYRRTKDESPARAEEIDHA
                     EEEGVDFQWLTAPVEILDDGDGNVRAMRCIRMELGEPDDSERRRPVPIEDSDYEFETD
                     MVVYAIGTNANPIIGQTSKIKLNEWGYVEVDDNLATSMAGVYAGGDIVTGAATVILAM
                     GLGRRAADNMKAYLGIRDTNTVYADHPVENTETLFGIAANERNFQRVRLAEEITSSTE
                     EEIHA"
     gene            complement(2528..3466)
                     /locus_tag="QF359_08550"
     CDS             complement(2528..3466)
                     /locus_tag="QF359_08550"
                     /inference="COORDINATES: protein motif:HMM:NF004862.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfide/dihydroorotate dehydrogenase-like
                     FAD/NAD-binding protein"
                     /protein_id="HJO86996.1"
                     /translation="MGIPRSSQAGTGEPGFKVVVRQDFSEATFLLEIEHPLMANAAHP
                     GQFVIVIPDEHGERIPLTIADFDRDKGTVTLVIQAVGKTSKEMQRTCRVGSVLFSVTG
                     PMGVPSHITDAKKIICVGGGLGVAPVFPQARAHKENGAYVIGIVGFRSKELVFWDDKF
                     EKYCDEFIVCTDDGSRGIKGLVTKGIEAAAKKHADIDELIAIGPPIMMKACAETTRSL
                     GIKTMVSLNPIMVDGTGMCGGCRVKVDGSIKFACVDGPDFDGHTVDFEDLMNRLQRFK
                     EDEKVALDNWTESCRRLNQSPHEPPQPDNSSPRAEA"
     gene            complement(3640..3858)
                     /locus_tag="QF359_08555"
     CDS             complement(3640..3858)
                     /locus_tag="QF359_08555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO86997.1"
                     /translation="MVNLNEMPYPMTRMLDYLEIGVARGFELMPEKMEAAMQQCVLCN
                     MFHTCDYQVESRYLICPNRIVYDQFEDL"
BASE COUNT          960 a         1070 c         1012 g         1051 t
ORIGIN      
        1 cttcttgctt gagcgaatag ccaggaccgg aggtaatcgt aaccgcacac ttgccggcgt
       61 aggatgcgcc gacggcgaaa gcgcaggcgg cgatctcatc ttcggcttga tgcaccaagc
      121 cgccgacttt cttgaagact tcacttagat aatgggaggc tgaggttgcc ggagtaattg
      181 ggtacatcgc acaaatctgc atacccgagg ccaggactcc aagactgagt gcggtgttgc
      241 cgttaacgat aatttgaggg gtgtttttct taaccgctgg gatctgatat ttgatatcga
      301 gattgtcggc tgcccaatcg cggccggctt caagcaatat ctggtttgcg ttgatgatgg
      361 tgtcgctctt tttagcgaaa atacgagcaa cctgttgacg gcccagttca aggtccaggc
      421 tgtagatgct gcacaacatg ccaaggacaa acatattttt accgcgcttg gcgtccggca
      481 catgcttcag gcattcaact tccatcggta tttcaagaat attatagcca tcgctatgta
      541 gatgatcgag ggtttccgca taggctgttg caatattggt gtcgggatgc gcagcccatt
      601 tattttcaag cagaataata ctacccagct tgatctcgtt ggcgttaatc cggctcaaca
      661 gaacctgttc gttgaaggca ataacgaggt ccgcctcatc gccgccgttg gttaccggat
      721 ttgacgatac gcggatacgg ttgccgctgg tgccttcggt actgcgagcc ggtggctgta
      781 tttcggctgg aatgatctcg cccgtccaaa tgccgttacc tgagcgcgcg gcgatcgagg
      841 caaaagactg tccacagcgc tgggcacctt caccggaatc gctgacgatc tcgacaatat
      901 gctccgccaa cttcacgatt ggcatcgccg acttgcttag cccctttttt tcagcgctat
      961 ctgaagccgt ttcaagcatg gatttcttcc tctgtacttg aggtaatttc ttcggccaaa
     1021 cgtactcttt ggaaattccg ctcattggcg gcaatgccga atagtgtttc ggtgttctcg
     1081 accgggtgat cggcgtaaac ggtgttggtg tcacggatgc caagataggc tttcatgttg
     1141 tctgcggcgc ggcgtccaag tcccatggcc aaaatcactg tggcggcgcc ggtgacgata
     1201 tcgccgccgg cataaacacc agccattgaa gtggccaaat tgtcgtcgac ctcaacatag
     1261 ccccactcat tcaatttgat ttttgaagtt tggccgatga tcggattggc gttggtgccg
     1321 atggcgtaga caaccatatc ggtttcaaac tcatagtcgc tatcttcgat tggaaccggg
     1381 cggcggcgtt cggaatcgtc gggttcacct agctccatgc ggatgcagcg catggcacgt
     1441 acattgccgt cgccgtcatc aagaatttcg actggtgcag taagccattg aaaatcgact
     1501 ccttcttctt cggcgtggtc aatttcttcg gcacgagcgg ggctttcatc cttggtccgg
     1561 cggtagacgc aatagacctt ctccgccccc tgccgcaacg ccacgcgcat ggcatccatg
     1621 gcagtgttgc cggcaccgat gatggcaaca cgcttgccca gatgcaatgg cgtatcatag
     1681 gatgggaact ctccggcatg cattaaattg caccgggtga gaagttcgtt agccgacaca
     1741 acgccgttga gggattcacc ctcaatgccc atgaattttg gatacccggc accggtacca
     1801 ataaatatag cgtcgaaacc aaactcatcg accatctgct ggatagtgaa tagacgccca
     1861 attaacacat tgcattcgat tttaacaccg agctttttca agttttcgat ttcttggtcg
     1921 acaacgctat tgggcaggcg gaattctggg ataccgtagc gcagcacgcc ccctggtaaa
     1981 tggagcgcct catagatggt gacatcgcat cccgctttgg ccatttccgc cgcacaggca
     2041 atgccggccg gcccggatcc gacaatgccg atcttaaagc cgtttggctc catatagggc
     2101 acattgaccc agttttcggc gatggcgaga tcaccaaccc accgttccag ccggccaatc
     2161 gccaccggtt tgagagtatc accgaccggg catacgcctt cgcactgatc ttcctgcggg
     2221 caaaccctgc cgcagattgc cggcaacaga ttggtttcgc tgatgacatc gtaggcgccg
     2281 cggtaatctt tggtggaaat ttttttgata aagccgggaa tatcaatcgc caccgggcaa
     2341 cttgcgatac aagcaggctc gggacaatac agacaacgct cgcattctct tagcgtatcc
     2401 gcaacttcat aaccgtaggt aacttcatca aagttgctaa cccgctccac tgcatcctgg
     2461 atcggcatgg gggtctgttc ctgagggata gttctgatgg ttcttttggc catggttcga
     2521 ttgccggtca agcctccgct cttggtgagg aattgtcggg ttgtggcggt tcatgaggag
     2581 attgatttaa ccgccggcat gattctgtcc aattatccaa ggcaaccttt tcgtcttcct
     2641 taaaccgttg cagccggttc atcagatctt caaaatcgac tgtatgacca tcaaaatccg
     2701 ggccgtcaac acaggcaaac ttgattgatc catcgacttt aacacggcaa ccgccgcaca
     2761 tgcctgtgcc gtcgaccatt attgggttca agctgaccat cgtcttgata ccgagggagc
     2821 gggtagtttc ggcgcaagct ttcatcatga ttggcggacc gatggcaatg agttcgtcga
     2881 tatccgcatg cttcttagct gccgcctcaa tacctttagt cactagccct ttgataccac
     2941 gagaaccatc atcagtgcag acgatgaact cgtcgcagta tttttcgaat ttatcgtccc
     3001 agaaaaccag ttccttagac ctgaagccga cgatgccaat gacataggca ccgttttcct
     3061 tatgagcacg tgcctgggga aaaacaggag cgacgcccaa tccgccgccg acgcaaataa
     3121 tttttttagc gtcggtgata tggctcggaa ctcccatcgg tccagtgacg ctgaaaagaa
     3181 cactgccaac tcggcaggtc cgttgcatct ccttcgatgt tttgccgacg gcttggatga
     3241 ccagcgtaac cgttcctttg tcacggtcga aatcagcaat ggtaaggggg atgcgctcgc
     3301 catgctcatc aggaataaca ataacgaatt gcccaggatg agcagcattt gccattaacg
     3361 ggtgttcaat ttccaatagg aacgtagcct cagaaaaatc ctgccgaacg accaccttga
     3421 aaccaggttc gccggtaccg gcttgacttg atcttgggat acccatcaac cttttcctcg
     3481 ggtttcggtc atccatattc tccgatttta attcggctaa gtccttatat aatcttttgg
     3541 ttctaactgt ttatgaggga tatgaacttg acgttagtca attgggcata attttactag
     3601 caccgtaaaa tttgtccagg gcgggacgcc aaacagatat tacaggtctt cgaattgatc
     3661 ataaactatt ctgttcgggc agattaaata acggctttct acttggtagt cgcaggtgtg
     3721 aaacatatta caaagcacgc actgctgcat tgcggcttcc atcttttcgg gcatcaactc
     3781 aaatccgcgc gccacaccta tctcgagata atcgagcatt cgtgtcattg ggtagggcat
     3841 ttcgtttaaa ttaaccatga ccgcaatcct cgaaattgtc ttgcattata caataaaatt
     3901 gcggcgtcgg taagtttcga atgttcttta tctataatga acaagttgca cagcggttgc
     3961 accaaagcag gcctacctga acaaatacgt tcactctcag ccagaagcag atattttgcg
     4021 ggttataaat tgatgtctaa tcttctaaaa tagcttcaaa gacagtcggc gcgccagcca
     4081 ggaaaacggc aat
//
LOCUS       DASCNL010000639         1534 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001319797, whole genome shotgun sequence.
ACCESSION   DASCNL010000639 DASCNL010000000
VERSION     DASCNL010000639.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001319797"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..306)
                     /locus_tag="QF359_08560"
     CDS             complement(<1..306)
                     /locus_tag="QF359_08560"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HJO86998.1"
                     /translation="MSAPEKFSGVLTPVITPFTSNLLPDAERLIRQCKWMLSQNVSLA
                     VFGTNSEANSLSADEKIELMDRLVEGGIDPKRMMPGTGCCALSDSVKLTAHAAKLGCG
                     "
     gene            complement(397..>1534)
                     /locus_tag="QF359_08565"
     CDS             complement(397..>1534)
                     /locus_tag="QF359_08565"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO86999.1"
                     /translation="QMAERRRIQAFVDRFRAQANKARQAQSRIKMLEKMKPIASVVEE
                     KTISFEFPHPSPLSPPLIALSQASVGYEPGQPILRDLDLRIDMDDRIALIGANGNGKS
                     TMIKLLAGRLKPELGKLVKSKKLEVGYFAQHQAEELDPDGSAIDHITRLREMEPAARL
                     RAHLGRFGFQQERACTKVANLSGGEKARLLFALMSLEKPHIMLLDEPTNHLDIDAREA
                     LVEALNIYEGTVILVSHDAHLVNLVADRLWLVDDGTCEVFEGDLADYERQLLEARATK
                     QSNGNGSTKLSENRKDQRRTRAEKRVESALLRKAVKESEKKIEALSAEIEKIETQMAE
                     PKFYDHSADEIAEWQKLLGKAKKDLTAAETTWLKAHEALEAIEN"
BASE COUNT          325 a          401 c          406 g          402 t
ORIGIN      
        1 accacagcca agcttagccg cgtgcgccgt cagtttgacg ctatcggaga gcgcgcaaca
       61 gccggtaccg ggcatcatcc gtttgggatc aatacctccc tcgaccagcc ggtccatcag
      121 ctcgatcttt tcatccgccg agagggagtt ggcttcactg ttggtgccga acacggcaag
      181 actgacattt tgtgagagca tccatttgca ctgacggatc aggcgttccg cgtcgggtaa
      241 cagattgctg gtaaaaggtg tgatgacggg tgtcaaaacg cctgaaaact tctctggtgc
      301 actcatggcc gggttcccat ttttttgtta tcgttcgtgg cgtagctaaa tgattatcgc
      361 ggttcattgc aagaccgaat taaggagaca acttacttaa ttctcaatag cctctaatgc
      421 ctcatgggct ttgagccaag tggtttctgc ggcggtgaga tcttttttgg ctttaccgag
      481 caatttttgc cattcggcga tttcatcggc tgagtggtca tagaattttg gttcggccat
      541 ttgcgtttca attttctcga tctcggcgga taacgcctcg atttttttct cagactcttt
      601 aacggctttg cgcaaaagag ctgactcgac gcgtttctcg gcccgggtgc ggcgctgatc
      661 ttttctgttc tcagatagct tggtgctgcc atttccattt gattgtttgg tcgcgcgcgc
      721 ctccaataat tggcgttcgt aatcagcgag atcaccctcg aatacttcgc aggtgccgtc
      781 gtcgaccagc cacaggcggt cggcaaccag attgactaaa tgagcatcgt ggctgaccag
      841 aataaccgta ccttcataaa tgttgagcgc ttcgacgagg gcttcccggg cgtcaatatc
      901 gagatggttg gtcggctcat cgagcagcat gatgtgcggc ttttcaagac tcatcagggc
      961 aaatagcaga cgtgctttct cgccacccga tagattggcg actttggtgc aagctcgttc
     1021 ctgttgaaat ccaaatcggc ccaaatgggc gcgcaatcga gctgcgggct ccatctcgcg
     1081 cagccgggta atgtgatcaa tagccgagcc gtccgggtcc agttcttccg cctgatgctg
     1141 ggcaaaataa ccaacttcaa gctttttgga cttcaccagc ttgccaagct caggcttgag
     1201 gcggccggcc agcagtttaa tcatcgtcga tttgccgtta ccattggcgc cgatcagcgc
     1261 tatccgatca tccatatcga tacgcaaatc gagatcacgt aaaatcggtt ggccgggctc
     1321 gtaaccgacc gaagcctggc tgagtgcaat cagcggtggc gacaaaggcg atggatgggg
     1381 aaactcaaag gagatagttt tttcctcaac caccgaggct attggcttca tcttttcaag
     1441 cattttgatc cggctttggg cttggcgggc tttattggcc tgagctcgaa agcgatcaac
     1501 aaacgcctga atacgccgcc gctcggccat ttgg
//
LOCUS       DASCNL010000640         3091 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001323220, whole genome shotgun sequence.
ACCESSION   DASCNL010000640 DASCNL010000000
VERSION     DASCNL010000640.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3091)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3091)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3091
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001323220"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(274..867)
                     /locus_tag="QF359_08570"
     CDS             complement(274..867)
                     /locus_tag="QF359_08570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87000.1"
                     /translation="MKLTITFASTLFLTGAILSASTKAAELTPLMAMKAFDAKGEKEF
                     TAQKIASFKRSFESVDGNKNGFLTEKEYISNSPHFRGHKAGARGFLFASDNDGDGRVS
                     KAEYVMNRIVTDEAKEIYTRIDPNTDWKSIPVFQWKMKRIAFEQSAYFSNRTIATQIF
                     ARMDANKDGVLHLPEYLRVYGPWARAGLPKEAIDGIK"
     gene            complement(1232..>3091)
                     /locus_tag="QF359_08575"
     CDS             complement(1232..>3091)
                     /locus_tag="QF359_08575"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO87001.1"
                     /translation="PRTSDTIASVMLGIPGTAASQATILDGYPLAQQGKAARAFGAAF
                     TVSAFGGVFGAIILAVSLPLILPIIKSFASPELFFLGLLGLAMVGTLSGASVLKGLSV
                     ACLGILLSTIGYGEAESIPRYHFETDYLLDNLPLIPVVLGLFAIPEIMELAIRNVSIS
                     RTPKDQTSDGSMLEGVKDVFRHWWLALRCAAIGTYVGMLPGLGAAIVDWVAYGHAVQS
                     AKDKSKFGFGDIRGVIAPEAANNATRGGSLIPTVAFGIPGSLGTAILLGALLIQGLKP
                     GPDMLTTELHITFSMVWTIVIANIVVAGLLMMWSKQVAKVAFVPGHLLVPGVILFVFL
                     GAWLGGADIGDWISCLTFGVIGFIMKRGGWPRPPLILALILGNIMENAFQISMGAYDG
                     FGWLARPIVLIVIALIAITIFLSVRGITKNKVSQTDNEDEADPAKAGRQEASEGGAKN
                     PLISLPFSIILFALFSWAGVQAFAWPESVNEFPIMSTVPGAIMVFFVLYFDWREASKE
                     IEIHDGFSGAMTAALDKAIVDRAILFFGYLLAMIIIMLIIGQKFAIPLFIFAYLIRWG
                     NYNWRVSLGYAAGGWLMIVGFYDRILDLLWYPSWLSTWLPELLPSWIQPWLFV"
BASE COUNT          900 a          765 c          683 g          743 t
ORIGIN      
        1 atctcactca cttcacataa ttggtatctt ttgccgttga ccttgaccag actgttgaac
       61 aggtaagcaa ggcctatact tgaattatgg tggttagtac cgatctaaca gaatttggac
      121 cgctcagtgg tctcgagacc ggtcctaaaa ctaacttcta cgacaagccg gttgggacac
      181 tgtcaattta actaattcca cgaggaacca aggataagtc gccaactagc ggcctcaacg
      241 taaatatccc gagatgctaa tattttcaag cgactacttg ataccatcaa tagcttcttt
      301 aggaaggccc gcgcgggccc aagggccata tactcttaga tactccggca aatgcagcac
      361 accatctttg tttgcgtcca tgcgcgcaaa tatttgggtg gctatcgtac gattagaaaa
      421 gtaggcgctc tgctcgaagg ctatacgttt cattttccat tgaaatacgg gtatagactt
      481 ccaatccgta ttgggatcaa ttcgagtata aatttctttc gcctcgtcag tgacaattcg
      541 gttcataaca tattcagctt tagagacgcg accatctcca tcattatcac tggcgaacag
      601 aaagcctcgg gcacccgctt tatggccgcg aaaatgaggg gaatttgata tatattcttt
      661 ttcggttaaa aacccgttct tattaccatc caccgattca aaactcctct taaaactggc
      721 aattttttga gcggtaaatt ctttctctcc ttttgcatca aaggccttca tcgccatcaa
      781 gggcgtaagt tcagctgcct tggtggaagc tgacaaaatg gcacctgtta ggaatagtgt
      841 cgatgcaaat gttattgtga gtttcacttt ctttttcctt ctcttaaccc acatttctca
      901 tataccttca aacaggggcc aattgtaggc tggtcttaca agctagtgcc ataggcgctg
      961 acgggggaca tgattatcca ttatatagaa ttttcaatct acttagaaag ctagtcgatc
     1021 cttaacatta atcatcattc cttagataaa aagccatgaa gggagccaag ttggaagcaa
     1081 ttccggcagc caaatcactg tcagacgaat aatttatggc gatgttttga aataacggaa
     1141 tggattgtga tttttcatcc gaaaacatta tgaaaatact gcgaactggt caaaggtgat
     1201 ttttgtctga cagtgccaaa tccaagcccg actaaacaaa caaccagggt tgaatccaag
     1261 atggcaacaa ttcaggtaac caggtcgata accaggatgg ataccaaagc agatcaagta
     1321 ttctgtcgta aaatccaacg atcatgagcc acccgcctgc agcatatccc aatgatacgc
     1381 gccaattata atttccccat cggatgaggt aggcaaatat aaaaagtggt atggcaaatt
     1441 tttgcccaat aatcagcatg ataattatca tcgccagcaa atatccgaaa aataagatag
     1501 ccctatcgac gattgccttg tcgagagcag cagtcatcgc cccggaaaat ccgtcgtgaa
     1561 tttcgatttc cttactcgcc tcgcgccaat caaagtagag cacaaagaac accataatag
     1621 cacccggtac tgttgacatg atggggaatt cgttgaccga ttccggccaa gcaaaagcct
     1681 gaacgccagc ccaactgaac aaggcaaaaa gaatgattga aaaaggtagt gagattagtg
     1741 gattttttgc accgccttca gaggcttctt ggcgtccggc ttttgccggg tccgcttcat
     1801 cttcattgtc agtttgcgat actttatttt tggtgatgcc tctcaccgac agaaaaatag
     1861 tgatcgcaat taaagcgatg acaatgagaa cgatggggcg cgccagccag ccaaaaccat
     1921 cataagctcc catgctgatc tgaaaggcat tttccatgat gttgccaagg atgagggcca
     1981 gaattagagg tggtcgcggc cagccgcccc gcttcatgat aaatccaata acaccaaaag
     2041 tgaggcaaga aatccaatcc ccgatatctg caccgccaag ccaagcacct aagaatacaa
     2101 ataaaatgac gccgggcacc aatagatgac ctggcacaaa cgcaacttta gcgacctgct
     2161 tgctccacat catcagcagg ccagccacaa caatattggc gatcacaatt gtccatacca
     2221 tgctgaaggt gatgtgcaat tcagtggtca gcatgtcagg accaggcttt aatccttgaa
     2281 taagcaatgc gcctaataag atggcagtac ccagactgcc gggaatacca aaggcaacgg
     2341 ttggaataag cgaccctccg cgtgtggcat tgtttgcagc ttctggcgca atcacgccgc
     2401 gtatatcgcc gaagccaaac ttggatttgt ctttggcgct ttgcacggcg tggccgtaag
     2461 ccacccaatc gacaatcgca gcgccaagtc ccggcaacat gccaacatag gtaccgattg
     2521 cggcacatct aagtgccagc caccaatgac ggaaaacgtc tttaacgccc tccagcatgc
     2581 tgccgtcact tgtctgatct ttcggcgtgc gcgaaataga aacatttcga attgccaatt
     2641 ccataatttc cggaatggca aacaggccga gcacgacggg aataagcggt aaattatcaa
     2701 gcaggtaatc tgtttcaaaa tggtatcgcg gtatagattc agcttcgcca tagccaatgg
     2761 ttgaaagcag aatgccgaga cacgcgacgg acagcccttt caacaccgaa gcgccactta
     2821 aggtcccaac catggccaac cccaacaggc cgagaaaaaa taattcaggc gaggcaaagg
     2881 atttaatgat cggcaagatc agcggcagtg acaccgcaag gatgattgca ccgaaaacgc
     2941 caccaaaggc ggataccgta aaggcagcgc caaaggcccg ggcggctttt ccttgttggg
     3001 ccaacgggta gccatccaaa atcgttgcct gagaggctgc ggttcccggg attcccaaca
     3061 tcaccgaagc aattgtgtca ctcgttctgg g
//
LOCUS       DASCNL010000641         1136 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001328524, whole genome shotgun sequence.
ACCESSION   DASCNL010000641 DASCNL010000000
VERSION     DASCNL010000641.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1136)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1136)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001328524"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="QF359_08580"
     CDS             complement(<1..382)
                     /locus_tag="QF359_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HJO87002.1"
                     /translation="MSRIFSGVQPTGDLHLGNYLGALRNWVALQHDYECIYCIVDMHA
                     ITMWQEPELLTPATREVTAGLIAAGLDPKNNVIFNQSAVPAHAELAWIFNCVARLGWL
                     NRMTQFKDKAGKNRENASVGLYAYP"
     gene            complement(466..>1136)
                     /locus_tag="QF359_08585"
     CDS             complement(466..>1136)
                     /locus_tag="QF359_08585"
                     /inference="COORDINATES: protein motif:HMM:NF015013.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HJO87003.1"
                     /translation="LRSGDEAAATASQNRAIEFSLFLTLPAAVALVVIAEPIISVLFE
                     RGAFDATSVKATAGALAIYATGLPAYVLVKALAPGYFARKDTATPVKIAVFALAVNLG
                     LNLILMGPFKHLGIAMATSVSAWCNALILAFVLIRRGHLAFDRRLLNRTPRMIATSLV
                     MGGTVFYGAVALADLPGQSLISNIIAVALLVSGGLVVYGGLSLLFGAASRDDLTRILP
                     RKST"
BASE COUNT          297 a          306 c          291 g          242 t
ORIGIN      
        1 tggggtaggc ataaaggcct accgaagcat tttcccggtt cttacccgct ttatccttga
       61 actgggtcat ccggttcaac cagcccagac gagccacaca attgaagatc caggcgagtt
      121 cggcatgggc cggtacggca ctctggttga aaattacatt gttttttgga tcaagcccag
      181 cagcgatcag gccggctgtt acctcacgcg tcgccggagt cagaagctcg ggctcctgcc
      241 acatggtgat tgcatgcata tcgacgatgc aataaatgca ttcgtaatcg tgttgcaatg
      301 caacccaatt gcgcaaagcg ccgagatagt tacccaaatg tagatcaccg gttggttgca
      361 cgcctgaaaa aatacggctc ataattcgtt tctgcctaaa taaattatgt ttattttaac
      421 tcatgaattc gaagtgcggt gttatggcgg cgcgagacgc ttaggtcaag ttgatttgcg
      481 cggtaaaatt cgtgtgagat cgtcacggct ggccgcgcca aacagcaaag acaagccgcc
      541 atagacaacc agcccgccgc tgacgaggag tgcaacggcg ataatatttg atattaggct
      601 ctgaccaggc agatcagcca gggctacggc gccataaaag acggttccgc ccatgaccag
      661 actggtggct atcatccggg gcgtgcggtt gagaaggcgc cgatcaaatg ccaaatgtcc
      721 gcgtcttatt agaacaaaag ctaggatcaa agcgttgcac caggctgaca ccgacgtcgc
      781 catggcaata cccaaatgtt taaacggtcc catcaaaatt aaattcaagc ccaaatttac
      841 ggccaaggca aaaactgcaa tcttaaccgg tgtagccgta tctttgcggg caaaataacc
      901 gggtgccaag gctttcacca gcacataggc cggcagacca gtggcataaa tcgccagtgc
      961 cccggcagtg gctttaactg aggtcgcatc aaatgcaccg cgctcaaaca acaccgaaat
     1021 gatgggttca gctatcacca ccagcgccac cgccgccggc agggtcagga acagcgaaaa
     1081 ctcgatggcg cggttttggc ttgctgtcgc cgcggcttcg tcaccgctcc tcaact
//
LOCUS       DASCNL010000642         1645 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001329443, whole genome shotgun sequence.
ACCESSION   DASCNL010000642 DASCNL010000000
VERSION     DASCNL010000642.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001329443"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..429)
                     /locus_tag="QF359_08590"
     CDS             complement(<1..429)
                     /locus_tag="QF359_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HJO87004.1"
                     /translation="MDTFNALVLNKDDDGVTSAVESVGIDDLPEGDVVVAVDYSTLNY
                     KDGLILKGLGGLVRNYPHVPGVDLSGVVKSSESADFSAGDRVVLNGWRFGEMCWGGYA
                     QKARVKSDWLVKLPDNISTEQAMAIGTAGYTAMLAVMARED"
     gene            complement(451..1497)
                     /gene="pyrC"
                     /locus_tag="QF359_08595"
     CDS             complement(451..1497)
                     /gene="pyrC"
                     /locus_tag="QF359_08595"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HJO87005.1"
                     /translation="MTEIILRRPDDWHVHLRDDAMLAAVLPFTARQFGRAIVMPNLVE
                     PVTTPALAVDYRHRILQALPDGKEYEHFEPLMTCYLTDETDAGQIEKGYTDSVFAAAK
                     LYPANVTTNSTNGVTDITCLEPVFAKMQEMGMPLLLHGEVTDPEVDIFDREAVYIEQV
                     LSPLIKEFPQLKIVMEHVTTKDAVEFVRAHRDQMAATITAHHLIINRSDIFEGGINPH
                     RYCLPIAKREVHRLALREAATSSDSCFFLGTDTAPHPVSDKEAACGCAGIFTAANALE
                     LYAQVFEEENALDNLEGFAALHGPAFYGMDANESAVTLVKKDWRVPGTIAVPDGSSVR
                     PFRAGRTLNWKMKD"
BASE COUNT          414 a          458 c          371 g          402 t
ORIGIN      
        1 atcttcccgc gccatcaccg ccagcatggc cgtgtagcca gccgtaccaa tagccatcgc
       61 ctgctcggtt gaaatattat cgggcaattt caccagccag tcggatttaa cccgggcttt
      121 ctgcgcatag ccgccccaac acatttctcc gaagcgccag ccatttaaga ccacccggtc
      181 accggcacta aaatctgcgc tttctgagct tttaacgaca cctgaaagat caacaccggg
      241 cacatgcgga tagttccgca ctaaaccacc aagacctttc agtataagac catctttata
      301 atttagcgtc gagtaatcga ccgccacaac gacatcacct tccggcaagt cgtctatgcc
      361 aacgctctca acggcagatg tcaccccgtc atcatctttg ttcagcacaa gggcgttaaa
      421 tgtatccaca atatttaaat cctattcaaa ttagtctttc attttccagt tcaatgtccg
      481 gcctgcccta aaggggcgaa ccgaactgcc atccggcacc gcaattgtgc ccggcacccg
      541 ccaatctttt ttaaccaacg tgaccgcact ttcattggca tccatgccat aaaaagccgg
      601 gccgtgcaaa gcggcaaaac cctcaagatt atcgagcgca ttttcttcct cgaacacttg
      661 ggcgtaaagt tcgagcgcat tcgcagcggt aaaaattcca gcacagccac aggcggcttc
      721 tttgtcactc accggatgcg gcgccgtatc ggtgcccaaa aagaaacagc tatcactgga
      781 ggtcgccgct tcgcgcaaag ccaagcgatg aacttcccgt ttggcgatcg gtaggcaata
      841 gcggtgtggg ttgataccac cctcaaatat atcgctgcga ttgataatca gatgatgcgc
      901 cgtaattgtc gctgccattt gatctcggtg agcgcggaca aactcgaccg catctttagt
      961 ggtgacatgt tccataacaa ttttgagctg gggaaattct ttgatcagcg ggcttagcac
     1021 ctgctcaata tagacggctt cccggtcaaa tatatcaact tcaggatcgg tcacctcacc
     1081 gtggagcaac agcggcatcc ccatttcctg cattttcgca aataccggtt caaggcaggt
     1141 gatgtctgta acgccgttag tcgaattggt cgtcacattg gctggataaa gcttagccgc
     1201 cgcaaataca ctatcggtat agcctttttc aatttgaccg gcgtcagttt catccgtcag
     1261 atagcaggtc atcaggggct caaaatgctc gtactctttg ccatctggta gtgcctgtaa
     1321 aatccgatgc cggtaatcca ctgccagtgc cggcgtcgtc actggttcga caagattggg
     1381 catgacaata gcgcggccaa attgacgcgc agtaaagggc aataccgctg ccaacatcgc
     1441 gtcgtctctg aggtggacgt gccagtcatc tggacgtcgt aggataattt cagtcatgtg
     1501 tttcggtaat ccccgatttt cgtccgctac ttatagcccg aaacttgagc catgtaaaaa
     1561 ttacctgatg acaattgact ctaggcatta ttagtttagg cttaaactaa atcacaaggc
     1621 cagggagcgg aaattggaaa ttgcc
//
LOCUS       DASCNL010000643         4529 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001332293, whole genome shotgun sequence.
ACCESSION   DASCNL010000643 DASCNL010000000
VERSION     DASCNL010000643.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4529)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4529)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4529
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001332293"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="QF359_08600"
     CDS             complement(<1..185)
                     /locus_tag="QF359_08600"
                     /inference="COORDINATES: protein motif:HMM:NF012576.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HJO87006.1"
                     /translation="MSKTRVTLKDVANKVGVHSSTVSRVLNPETRKMVTEEIAAKILS
                     AATEMGYRPNAFAQSLKT"
     gene            291..1226
                     /locus_tag="QF359_08605"
     CDS             291..1226
                     /locus_tag="QF359_08605"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87007.1"
                     /translation="MAKNDLKGKTVGWIGTGRMGYAMAERLLKAGAELSAWNRTKSKA
                     EPLAELGATIVDSPAELADRDIVFTMVAGPADFVEVAKGENGVLSQGGQTPGLLVDCT
                     TISEEASHEVREFATSVGTSMLDAPVSGNAKVVKAGKLSIVASGAKDAYDEALPYLES
                     IAQGVSYVGEGELARMVKICHNVFLGVLIQSLAEITVLAEKGGVPRHAFMDFINKSAV
                     GSMFTAYKTPSLVNLDFAPTFTPLLLRKDMELGLSAARNLNVPMPVASMTREIIQNLI
                     GNGYTDCDFAALIEMQAKNSGYEIKSEDVEVETGL"
     gene            complement(1458..3176)
                     /locus_tag="QF359_08610"
     CDS             complement(1458..3176)
                     /locus_tag="QF359_08610"
                     /inference="COORDINATES: protein motif:HMM:NF006203.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HJO87008.1"
                     /translation="MAIKKMKSGTTADLYLRLLANRGIDYIFANPGTDFAPIIESYAK
                     NENGKDKMPTPISVAHENVAISMGLGYYLATGRMQAVMVHVNVGTANAICGIINAAKD
                     NVPVLMTAGRTPLTETELPGSRSGSIHWAQEMFDQASMVRESVKWDYELRNSEQTEVV
                     VDRAIEVANAVPKGPVYLSLPREVLSSEIKDIEYEAPPRKAAPTPAAPDSSAIDQAAE
                     LLADAERPLILTRSAGRYTPDAEALAKLAQDFALPVTEYRPVYNAMPGDHEMNFGMDV
                     RPHLEQADVVLTLDTDVPWLPDFNGEPPKEAKVIQMATDPLFQSYPIRGFTRDLCITA
                     DLSLGLTALSEALEGRNIAAIDARRAHLADLKAEQKNQSAAILAKIKNQTPIHPGWAS
                     HLLGERLDDDSLIFNDYPLLLPFMNRPQPHTYFGTPNAGGLGWGVGAALGAQLACPDK
                     LVVSACGDGSYMFGNPIAAHHVAKAHDLPVLFLVFNNSLWNAVRRSTLGMYPDGHAAK
                     SNRMALISLDPAPEFDKMMDVCGGYGEKVEDPNELGDALDRAIHVIKVEKRQALLNII
                     FASPAL"
     gene            complement(3189..4169)
                     /locus_tag="QF359_08615"
     CDS             complement(3189..4169)
                     /locus_tag="QF359_08615"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87009.1"
                     /translation="MSTVIDVHTHMLNDRWLSSILEHGGRYSLKELGGQRVIHYDDAP
                     FMTLMDPMFDYAQRITDMDKAGVDIAIVSLTCPSVYWGGEEVSTATAQMMNDDMSDQQ
                     STYPDRIRWFATLPWQYPEKAIAELERACEKGAAGVFVSASITGMSLTNPAIASIWDA
                     IDQRELPVLVHPGAPPGVAEMDMVKYNLAFSVGFMFDTTLAISRMIFDGFFDRYQKVK
                     IIACHAGGTLPYIVGRLDQAFDKMPPCREVISERPSTYFDRLYFDSIAYTQEALELCL
                     HVSGSDRLLYGSDYPHNVGDMPGNLARVDTLAPDIAKKVRGKNAIQLFGF"
     gene            complement(4313..>4529)
                     /locus_tag="QF359_08620"
     CDS             complement(4313..>4529)
                     /locus_tag="QF359_08620"
                     /inference="COORDINATES: protein motif:HMM:NF013706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJO87010.1"
                     /translation="VNDEVRQDSNTDQLVYNVQKCIEYTTTRYTLYPGDIIMTGTPEG
                     VGPVEPGDTMTAEIEGIGHMEVAIRRA"
BASE COUNT         1091 a         1080 c         1160 g         1198 t
ORIGIN      
        1 gttttgaggc tttgggcgaa ggcattaggg cgatagccca tttcggtggc ggctgacaga
       61 atcttagctg caatctcctc ggttaccatc ttgcgggttt ccggattaag cacgcgtgat
      121 acggtcgagg aatgaacccc gactttgttg gcaacatctt ttaaggtaac gcgtgttttg
      181 ctcatgttct tcaaattatc cgataaaaca ctttttctta tccgtgtcag atggtatatg
      241 ttatgcaatc gtttgcatag ttttttatct ttatcgggag ggaccccaaa atggcaaaga
      301 atgatctcaa aggaaagaca gtcggatgga tcggcactgg tcgcatgggc tatgcgatgg
      361 cggagcgcct gttgaaagcc ggcgctgaac tttctgcctg gaatagaaca aaatcaaaag
      421 ccgagccatt ggcggaattg ggggcaacta ttgttgatag cccagccgaa cttgctgatc
      481 gggatatcgt tttcactatg gttgctggac ccgctgattt tgtcgaggtg gccaaaggcg
      541 aaaatggcgt attgtcgcaa ggcggccaaa ctccgggctt gttggtcgac tgcacgacga
      601 tttcggagga agcctcccat gaggtgcgtg agtttgccac cagcgttggc acctctatgc
      661 ttgatgcgcc ggtaagcggc aatgccaaag tcgtcaaagc tggcaagctc agcatcgtcg
      721 cctcgggtgc taaggacgcc tatgatgagg cgctgcctta tcttgaatct atcgcgcaag
      781 gggtcagcta tgtcggtgaa ggcgagttgg cccgcatggt taagatttgc cataacgttt
      841 tcttaggggt cctcattcag tctttagcgg aaattacggt attggctgaa aaaggtggtg
      901 taccgcgtca cgcgtttatg gatttcatca ataaaagtgc cgtgggctca atgttcactg
      961 cctacaaaac accgtcattg gttaatctcg attttgctcc aacctttaca ccgctgttgc
     1021 tgcgtaaaga tatggagctt ggtctgtcgg cggcgcgcaa tttgaacgtg ccgatgccag
     1081 tcgcctccat gacccgtgaa atcattcaaa acttgatcgg taatggctat accgattgtg
     1141 atttcgccgc gctgattgag atgcaggcaa aaaattcagg ttacgaaatt aaatctgaag
     1201 atgttgaggt ggaaaccggt ctttaaatca agcggacttt aggctttatt tacttcgttt
     1261 atcatcatcg ccaactgatc tatttaaaaa ggtttattca aaattgggaa agatatgtta
     1321 gaagcgttgt cttctaatac tgtcttttcc gcatagctcg tcataatgac tacttttaag
     1381 gccggattga tccgcaaggc tttagaagca atactaaaga tggcacgtaa tgttacgtgc
     1441 gacggagccg gaaaaactca taaagcaggt gaggcgaaga ttatatttaa cagtgcttgg
     1501 cgtttttcaa ctttaattac atggatggca cgatctagtg catcacccag ctcgttcggg
     1561 tcttcaactt tctcgccata gccgccacaa acgtccatca ttttgtcgaa ttcaggtgcc
     1621 gggtcgagcg agattaacgc catccgattg cttttggctg catgcccatc aggatacata
     1681 cccagcgtgg aacggcggac cgcattccac aaagaattgt tgaagaccaa aaacaggacc
     1741 ggtaaatcgt gcgctttagc gacgtgatgg gcggcaattg gattaccaaa catataggag
     1801 ccatccccac aggccgagac gaccaattta tccggacaag cgagttgcgc gcctaacgcc
     1861 gcacccacac cccagccaag cccaccggca tttggcgtac caaaataggt gtggggttga
     1921 ggcctgttca tgaagggtag cagcaatgga taatcgttga aaatcaatga atcatcatcc
     1981 agccgctcgc caagcagatg gctggcccat ccgggatgta tcggtgtttg atttttaatc
     2041 tttgctaaaa tcgcagcgga ttgatttttt tgctcggctt taaggtcagc taagtgtgcc
     2101 cggcgggcat cgattgcggc gatgtttctg ccctcaaggg cttcggaaag tgcagttaat
     2161 ccgagactta aatctgccgt gatgcaaagg tcccgggtaa atcctctaat tggatagctt
     2221 tggaacaatg gatcggtcgc catctggatt accttggctt cttttggtgg ttcgccgttg
     2281 aaatccggca accatggcac atcggtatct aaggtaagta cgacatcggc ttgttctaga
     2341 tgaggccgga catccatgcc aaagttcatc tcgtgatcac caggcatggc attgtatacc
     2401 ggcctgtatt ccgttaccgg taaagcaaaa tcctgagcta atttagccaa ggcttcggcg
     2461 tctggtgtgt accgtcccgc cgatctggtt aaaattaacg ggcgttccgc atcagcaagt
     2521 aattcagcgg cttgatctat cgcagaactg tcgggagctg ctggcgtggg cgcggctttg
     2581 cgcggtggtg cttcatattc aatatcttta atctcggagc tgagcacttc gcgtggtaga
     2641 gatagatata ccggtccttt tggcaccgca ttagcaactt cgatagcgcg gtcgacaact
     2701 acttcggttt gctcgctatt ccgcaattcg taatcccatt taacggattc gcgaaccatg
     2761 ctggcctgat cgaacatctc ttgggcccaa tgaatgctac ccgagcgtga ccctggtagt
     2821 tccgtctcag tcaatggtgt acggcctgcg gtcatcaaaa ccgggacatt gtctttggct
     2881 gcattgatga tgccgcagat tgcgttggcg gtgccgacgt tgacatgaac catcaccgcc
     2941 tgcatccggc ccgtcgccag gtaatagccg agacccatgc taatagcgac attttcatgg
     3001 gcgaccgaaa ttggcgttgg cattttgtct ttgccattct cattttttgc ataactctcg
     3061 atgatcggag caaagtcggt accaggattg gcgaaaatgt agtcaatccc ccggtttgct
     3121 aataggcgga ggtagagatc agccgtcgtt cctgatttca tttttttgat tgccattaaa
     3181 cgggtctcct aaaaaccaaa taactgtatg gcattctttc ctctgacctt tttggcaata
     3241 tcaggcgcca aggtgtcaac gcgcgctaaa ttaccaggca tgtcacccac attgtgcgga
     3301 tagtcggaac catatagcag tctgtctgat ccggacacat gtaaacagag ttccagagct
     3361 tcttgagtgt aagcaatgga atcgaagtat aggcggtcaa aatatgtgct tggccgttct
     3421 gaaatgactt cccggcaagg cggcattttg tcgaatgcct gatccagccg cccgacaatg
     3481 tagggtaatg tacctccggc atggcaggct atgattttga ccttctggta gcgatcaaaa
     3541 aacccatcaa atatcatgcg cgatatggcc aaagtcgtat cgaacatgaa gcccactgag
     3601 aacgctaaat tgtattttac catatccatt tcagcgacgc ctggcggcgc gcctggatga
     3661 accaggaccg gcaattcgcg ctggtcaatg gcgtcccaaa tcgaagcaat ggcgggattg
     3721 gttaaggaca tcccagtgat actggctgat acgaatacac cagcggcacc tttttcacag
     3781 gcgcgctcta actcagcgat cgctttctca ggatattgcc aaggcagggt agcaaaccag
     3841 cgaatccggt ctggataggt ggactgttga tccgacatat catcattcat catctgggcg
     3901 gtggcggtgc tgacttcttc gccgccccaa tagacactcg ggcaggtcag cgacacaatt
     3961 gcgatatcca caccggcttt atccatgtcg gtgatgcgtt gggcatagtc gaacattggg
     4021 tccatcaagg tcataaatgg tgcgtcatca taatgaatca cccgttggcc accgagttct
     4081 ttcaaagagt aacgcccacc gtgctccaat atagagctta gccagcggtc attgagcata
     4141 tgcgtatgga catcaattac agttgacatc taatcctccc acagcgattt gctaatatta
     4201 ttcagcagag tatgcggttt atccagccgg catgtaaatc aattgcaggt cgattgttgg
     4261 cttctgcggt gattttattc cgcgatatgg aaagaaggcc tggtaagagg tgttaagccc
     4321 ggcggattgc aacttccata tgtccgatac cctcgatttc tgctgtcatg gtatcacccg
     4381 gttcaaccgg accaacgccc tccggtgtgc cggtcataat aatgtcgccg ggatacagcg
     4441 tgtagcgtgt ggttgtgtat tcaatgcatt tctgaacatt atagacgagt tggtcggtgt
     4501 tggagtcttg ccgaacttca tcattcacc
//
LOCUS       DASCNL010000644         1095 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001332369, whole genome shotgun sequence.
ACCESSION   DASCNL010000644 DASCNL010000000
VERSION     DASCNL010000644.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1095)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1095)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001332369"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1095
                     /locus_tag="QF359_08625"
     CDS             <1..>1095
                     /locus_tag="QF359_08625"
                     /inference="COORDINATES: protein motif:HMM:NF019968.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87011.1"
                     /translation="KIADDEDVEVVSKLLEGKAFKVICDYLEEVKASLLMVGMTGVHA
                     DCNLDIGGNAENLLRMSPCHIWLGRTEHVPPMEVVAEETISWSNEAEEFLKRAPSFVQ
                     EMAKKAVNRYAQEKGHTFITQDIVEIVANEMMPGGGRSQKQLEEEQTVTWSASAEELI
                     KRHVELPMAANIKLRAEKRARRNQAKEVLDEHVLPFIDTSVNIEAGVEGEYVWAAAAL
                     ARLSRVPDAMREATRARIEGVAHERDTTEVTLEIVEAGLEIARVAMSDAIGAKDEEPK
                     ETAEEKGFVCPFAGKAKAEKSEEVKPTIVWAEDAEARMTKIPEGFMRDMTRQRVEVYA
                     EKQNIETITEALVEEKYAEWAKGSAKQKRKM"
BASE COUNT          316 a          248 c          310 g          221 t
ORIGIN      
        1 aagattgccg atgatgaaga tgtcgaagtt gtcagtaaat tgctcgaagg caaagccttc
       61 aaagtcattt gcgattatct cgaagaagta aaagccagcc tattgatggt cggcatgacc
      121 ggcgttcatg ctgattgcaa cctcgatatc ggtggcaatg ctgaaaatct tttacggatg
      181 tcgccgtgtc atatatggct cggtcggacc gaacacgtgc cgccgatgga ggtggttgcc
      241 gaagaaacca tctcctggag taatgaagcg gaagaatttc ttaaacgcgc gccaagcttc
      301 gttcaggaaa tggcaaaaaa agcggttaat cgttatgccc aagaaaaggg tcataccttt
      361 atcacccagg acattgtcga aattgtcgcc aatgaaatga tgccgggtgg cgggcgctcc
      421 cagaaacaac ttgaagaaga acaaaccgta acttggtcag cctcggcgga agagttgatc
      481 aagcgtcatg tcgaattacc gatggcagct aacattaagc tccgcgctga aaagcgggcg
      541 cgtcgcaacc aagctaaaga agtgctggat gagcatgtgc tgccgtttat cgataccagc
      601 gttaatattg aagcgggtgt tgaaggcgaa tatgtctggg ccgccgcagc tttggcacgg
      661 ctttcccggg tgccggatgc gatgcgggaa gcgacgcggg cgcggattga gggtgtggcc
      721 catgaacgcg acaccacaga ggtcacactc gaaattgtcg aagccgggct tgaaatagcg
      781 cgcgttgcca tgagtgacgc catcggtgca aaagatgaag agccaaaaga aacagccgaa
      841 gaaaaaggtt ttgtctgtcc ctttgctgga aaggctaaag ccgaaaaatc tgaagaggtg
      901 aaacccacca ttgtctgggc cgaagacgcc gaggcccgga tgactaaaat cccggaaggt
      961 ttcatgcgcg atatgacccg tcagcgggtt gaggtttatg ctgaaaaaca aaacatcgaa
     1021 accatcaccg aagccttggt tgaagaaaaa tacgccgaat gggccaaagg ctctgccaag
     1081 caaaaacgca aaatg
//
LOCUS       DASCNL010000645         1321 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001340352, whole genome shotgun sequence.
ACCESSION   DASCNL010000645 DASCNL010000000
VERSION     DASCNL010000645.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001340352"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            176..817
                     /gene="nth"
                     /locus_tag="QF359_08630"
     CDS             176..817
                     /gene="nth"
                     /locus_tag="QF359_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HJO87012.1"
                     /translation="MNKAKIHHFYAKLEQQNPEPKGELHYVNDYTLLVAVVLSAQATD
                     VGVNKATKPLFKKIKTPKKMVELGEAKLKNYIKSIGLYNSKAKNVIKLSHMLLDEYGG
                     KIPENRDELQKLPGVGRKTANVVLNIAFSQPTIAVDTHLFRLGNRTGLAPGKTPLEVE
                     KKLEQVTPLEFLRHAHHWLILHGRYVCKARKPDCPTCVVRDECGFKAKTTLDG"
     gene            complement(814..972)
                     /locus_tag="QF359_08635"
     CDS             complement(814..972)
                     /locus_tag="QF359_08635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87013.1"
                     /translation="MEDSPGNDFLDGEKTGDAPAKEVKKPVPDELPDAPKLGRTESED
                     NLLEDPAP"
     gene            complement(984..>1321)
                     /locus_tag="QF359_08640"
     CDS             complement(984..>1321)
                     /locus_tag="QF359_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87014.1"
                     /translation="PKTTDAVEKPTQIAAVEIDLTNFKERLLGLDGSEITELLGEPKF
                     ERSEPPAQIWQYQSNECFVDLFLFEEIGDLTVDHVEVRGKQVEKTDEKICFASILKAA
                     NGGERKQNR"
BASE COUNT          324 a          325 c          310 g          362 t
ORIGIN      
        1 gccgaactgc ctgatgatga ataacgttgg gcattattgc ccttctgttc tgttcccttt
       61 gatctttgac agtttgtctg ccggctgaaa caatatgacc gttgcgtttg agaaacgcca
      121 cctagtttgt taatatttaa aaaggtgaca ggcattttta gaaaaattaa cttttatgaa
      181 taaagctaaa attcaccact tttatgccaa gctcgaacag caaaatcctg agcccaaagg
      241 cgagctgcat tatgtcaatg attatactct gctggtggcc gtcgtcttgt cagctcaggc
      301 gaccgatgtc ggcgtcaata aggcaaccaa gccgctgttt aagaaaatta aaacacctaa
      361 gaaaatggtc gagcttgggg aagccaagct gaaaaattat atcaagtcca ttgggcttta
      421 taattcaaaa gctaaaaacg tcattaaact tagccacatg ctgcttgatg agtacggcgg
      481 caaaataccg gaaaaccggg acgagctgca aaagctgccg ggggttggcc gcaaaaccgc
      541 caatgtcgtg ctcaatatcg cttttagcca gccgacaatt gcagtcgaca cccatttgtt
      601 ccggcttggg aatcgcactg gtctggcgcc cggaaaaaca ccgctggagg tggagaaaaa
      661 actcgagcag gtaacgccgc ttgagttcct gcgccacgcc catcactggc tgatcttgca
      721 cggccgctat gtctgcaaag cgcgcaaacc ggattgtcca acttgcgtcg tccgtgacga
      781 atgcggcttt aaagctaaaa cgacgcttga cggttagggt gccgggtctt ccagcagatt
      841 gtcttcgctt tcagtccggc cgagcttagg tgcgtccggg agctcatccg gaaccggttt
      901 tttaacctct ttggccggcg cgtctccggt tttttcgcca tcaagaaaat cgttacccgg
      961 gctgtcttcc attgccggtt tttttaccgg ttctgttttc tttcgccacc attggcggct
     1021 tttaaaatac tggcaaagca aattttttca tcagttttct cgacttgttt gccacgaacc
     1081 tcaacatgat caaccgttaa atcgcctatt tcttcaaaca aaaacagatc gacgaagcat
     1141 tcattgcttt ggtattgcca aatttgcgcc ggtggttcac tgcgctcgaa ttttggttcg
     1201 ccgagaagct cggtgatttc gctgccgtcg agccccaaca agcgttcttt aaaatttgtc
     1261 agatcaatct caaccgcagc tatttgtgtt ggtttttcga ccgcgtcggt agttttgggc
     1321 g
//
LOCUS       DASCNL010000646         6588 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001343420, whole genome shotgun sequence.
ACCESSION   DASCNL010000646 DASCNL010000000
VERSION     DASCNL010000646.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6588)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6588)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6588
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001343420"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="QF359_08645"
     CDS             complement(<1..248)
                     /locus_tag="QF359_08645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87015.1"
                     /translation="MIGRYTEDMILRPDQLSSLNLYAYDVLRRLYPQFLAFLFYRWEV
                     IMRETAIFGIRGIAILGFYIDSAFADLCFNRALFLNTVT"
     gene            504..1169
                     /locus_tag="QF359_08650"
     CDS             504..1169
                     /locus_tag="QF359_08650"
                     /inference="COORDINATES: protein motif:HMM:NF024583.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HJO87016.1"
                     /translation="MFGKFGKIDSQLQELKAQQEALVESENEVKDGKLLSFYIRIMAK
                     VTDCERCSIFIYDPNKESVWLKAGTGFEERGIEVPVKESIAGQAILSGETIIVSDMAD
                     RPGASKTVEKLTGFVIRNLLCVPIKSSTQNRATGAFQLLNKKDDQEFNQEDISLAEEI
                     AEHLQMETDRIFLDQEVFGLVERHFAPPGKIASIVIAGVILIFLFSIFLLTATGMLAL
                     FVS"
     gene            complement(1197..1967)
                     /locus_tag="QF359_08655"
     CDS             complement(1197..1967)
                     /locus_tag="QF359_08655"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HJO87017.1"
                     /translation="MSESLKDSASGIRVISRAAELLCTLNEESRGLSLGQIAALVKLP
                     RSTVQRIVGALKIEGFVIDGPGESQIRIGPTFFSIAAASLSDFKDPIRPYLEELCDEL
                     DETVDLSILSGSSVVFLDQCSSRRKGLIAVSEVGARFPAHSCAPGKCLLAEVNDSSLS
                     HILPKKLDQLTSATITDLESLQAELNNVRKQGIATDRQEHTEGISAVATVITNLPRGT
                     AAISIPMPTQRFKGNEKRYAEALLAAREKINHALGLNR"
     gene            2099..5110
                     /locus_tag="QF359_08660"
     CDS             2099..5110
                     /locus_tag="QF359_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87018.1"
                     /translation="MKLSLILYVLPWLLRFKAWSHKEFRDRLKEKNLTVQFKVADDSI
                     GRSISIKDGRIISAGSIHPSPDVVISFKSEAIAADLLMLPIDYQVQIDAIKNFNLKAV
                     GPDELITWFSETILMSQTVGWQFGTPVENSEMRYVNQTNGGPVHVYVKDGKIVRMTPI
                     DFQKDDGDTWTVKARGKEFSPPRKTTLSPHGLASKSLVYSKERNLYPMKRVDFDPNGE
                     RNIQNRGITGYERVSWDEALEIVSSEIKRVKRTYGPGAILAARSSHHTWGNVGYYISA
                     YQKFINIIGATMTMLNPDSWEGWYWGGMHHYGNSMRNGAAEIYGQVEDCLQEAEMIVY
                     WSSDPEVTGGVYGSFEGTVRRQWAKELGIEMVHIDPFLNETAAFMGGKWLAPRPTTSP
                     AMAHAITYVWIKEDLYDKVYVESRTTGFDKWRAYIMGDDDEGVAKTPEWAEAETGVPA
                     REIRALARQWGSKKTYLSAGSMGTTLGGACRSATGAQWARSMICLMAMQGLGKPGINF
                     GGLQFGSPIDYNFYFPGYAEGGFSGDSMNSASGVSLYQRMPHLISVNPTMQSIPRLKM
                     PEALIEGKAEGYPIDIRSIEAQFFPVHYPSPGHSPVKMMYKYGSSYISTQPDSNRYVK
                     MYQNEDLEFVVSQTIWNEGEVKFADVILPACTNFERWDIGEWANPGGYGYDWIGQLNH
                     RVISIQHKCIEPLGESKSDYQIFHDVCARLGHAAYFTEGNREIDWVKRMFDASDLPKH
                     ISWEKFRTKGYFVVPAEKEKLRPPTSYKWFADGNKKNVPEPQPLPGSYGEDFLEGLQT
                     QSGKIEFESESLKRYGNDPERPPLNKYIPSWEGIHTSELFAKFPLQLISPHARYSFHT
                     KGDGKDSAVNDIKDHRVNIDGYFYWLVRISATDAKARGIEENDLVKLYNDRGAVICAA
                     RITERLMPGIIHCRQASAVYDPLGKPGYSADRGGCVNLLTPKRMQTEKVHSAAYNSCL
                     IEIEKWDRIDAINGDAASAAESQPESMVPAE"
     gene            5127..5969
                     /locus_tag="QF359_08665"
     CDS             5127..5969
                     /locus_tag="QF359_08665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO87019.1"
                     /translation="MKKWNLIVDVAKCHNSNNCFLSVADEYVGNEHPGYATAMPLHGH
                     HWIDIKRKERGQAPMVDVTYMPTTCNHCDEAPCVAAAENNAITKRLDGLVIIDPEKAQ
                     GQKQLVDACPYGAIWWNEEKEVPQAWIFDAHLLDRGWKEPRPVQACPTGALKSVQVED
                     TEMQKMVTDEELQVLHPEHGTKPRVYYKNLNLFFKCFIGGSVIADIDGVEECVEKAIV
                     LLSKDGHKIAETRSDAFGDFKIDDLEPGSGNYEIEVSHPDHSSKYVEVTLSDSTYVKV
                     VKLG"
     gene            complement(6187..>6588)
                     /locus_tag="QF359_08670"
     CDS             complement(6187..>6588)
                     /locus_tag="QF359_08670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87020.1"
                     /translation="TSKKMLLASLYSLRALVMLGFILLPMNILTVVVLSAAMGMLWLG
                     TVPLTTGLVVQIFGTQYMATLVGFTFLGHQIGSFLGIWLGGWVFDTTGSYDPIFWGGI
                     ILGLLATLAHFPINDKPVARLAEEALRASKI"
BASE COUNT         1740 a         1541 c         1712 g         1595 t
ORIGIN      
        1 gtgactgtat ttaggaataa tgcccggtta aaacacaaat cagcgaaggc gctatcgata
       61 taaaaaccga ggatagcgat accgcgaatg ccgaaaatgg cggtttcccg cattatcact
      121 tcccagcgat agaacaaaaa cgccaggaac tgcggataga ggcggcgcaa tacgtcataa
      181 gcgtaaagat tgaggctcga gagctggtcg ggcctgagga tcatgtcttc cgtgtaacgt
      241 ccgatcaaat ggccgataat ggctccgtta tgtggctaat tttgttggat agatttatct
      301 agctaggtga tctagctgca agtagagcca ttccagcagt tttgacaaaa atcaatgctt
      361 ggtctaacga attttgctta gatacgctca acgcttcaaa aatgccagta cagaaactaa
      421 ggatgattat cgcaaattga atgaagatcg ccatttatta gacgacgagg caacctttcc
      481 attatttgga gttcaagtgt aaaatgtttg gtaaatttgg taaaattgat tcacaactcc
      541 aagaattaaa agcacagcaa gaagctctgg ttgaatccga aaatgaagtg aaagacggta
      601 agctgctttc attttacatt cgtattatgg cgaaagtcac tgattgtgaa agatgcagta
      661 ttttcattta tgatcccaat aaagaaagtg tctggctgaa agccggcacc ggatttgaag
      721 aacgtggcat cgaagtaccg gtaaaagaat cgatagctgg gcaggccatc ctttcaggcg
      781 agactattat cgtatccgat atggcagatc gccccggcgc ttctaaaacg gttgagaaat
      841 taaccggctt tgtgatccgc aacctccttt gcgtgccaat caaaagttcg acccagaata
      901 gagccaccgg tgcgtttcaa ctcctgaaca aaaaagacga tcaggaattt aatcaggaag
      961 atatttcact ggccgaagaa attgctgaac atttgcagat ggagacggac cggatttttc
     1021 tcgatcagga agtctttggg ttggtcgagc gtcattttgc gccgccggga aagattgcct
     1081 ctattgtaat tgctggcgtg atcttaattt tcctgttctc aatctttctg ctgacggcaa
     1141 ctggtatgct tgccttgttc gttagttaat ccttggcgaa tttggcgtgc tatgaattac
     1201 cggttaagac ccagcgcatg attaattttt tcacgggctg ccagcaaagc ctcggcataa
     1261 cgtttttcgt ttcccttaaa gcgctgcgtc ggcatcggga tagaaatggc cgctgttccg
     1321 cgtggcaagt tggttatcac cgtggcgaca gcggaaatac cttctgtatg ttcttgacgg
     1381 tcggtggcaa tgccttgttt gcgcacgttg tttaactcag cctgtaaaga ttccaaatcg
     1441 gtgattgttg cgcttgtaag ctggtccagt ttttttggca atatatgact gagggaacta
     1501 tcatttactt ccgctagcaa acatttccca ggtgcgcagg aatgggcagg aaagcgggcg
     1561 cctacttccg ataccgctat cagtcccttg cgccgagatg aacattgatc aagaaaaacc
     1621 actgagctgc cgctgaggat cgaaagatca acggtttcat ccaactcatc acagagttct
     1681 tcgagataag gccggattgg atctttgaaa tcagataaag aagcagcggc aatactaaaa
     1741 aaagtcgggc ctatgcgaat ttgcgattca ccgggcccat caatgacaaa accttctatt
     1801 ttgagcgcgc cgacaatgcg ttgaaccgtt gagcgaggca gcttgacgag agcggcaatc
     1861 tgcccgagac ttaaacctcg agattcttca ttgagcgtgc acagtagttc cgctgcacgt
     1921 gaaattacac ggataccgga agcggagtct ttgagtgatt ctgacattga catatttccg
     1981 ttaatagata cgattaatca tctagtggac ggaatgtatc acaatacgat acaggcaatc
     2041 aactgcttta aatagagaaa taaaacactg cggcaggaca ggaaataagg acgggctgat
     2101 gaaactttca ctaatattgt atgtgctgcc gtggttgctg cgctttaaag catggagcca
     2161 taaagaattt cgtgaccgcc tgaaagagaa aaatctaact gttcagttta aagtcgctga
     2221 tgattccatt ggccgttcaa tctcgattaa agatggcagg ataatttcag ccggcagtat
     2281 tcatccgagt ccggatgtag ttattagttt taaatcagag gccattgcgg ccgatctgct
     2341 gatgctgccg attgactatc aggtgcagat tgatgcgatt aagaacttta acctgaaggc
     2401 cgtcggtccg gacgaactca tcacctggtt ctcggaaact atcttgatga gccaaaccgt
     2461 cggctggcag ttcggcactc cggtcgagaa cagtgaaatg cgttacgtca atcaaaccaa
     2521 tggcggtccg gttcatgtct atgttaagga tggtaaaatt gtccgtatga cgccaatcga
     2581 ttttcagaaa gatgatggcg acacctggac ggtcaaagcg cgcggcaaag agttttcacc
     2641 gccgcgcaaa acaacgttgt cgccgcatgg cctggcatca aaatctctgg tttattcaaa
     2701 agagcgcaac ctttatccga tgaagcgggt cgactttgat cccaacggtg agcgtaatat
     2761 tcagaaccga ggtatcacgg gctatgagcg tgtttcttgg gacgaggcct tggaaattgt
     2821 ttccagcgaa attaagcggg tcaaacgtac ctatgggccg ggcgcgatct tggcggctcg
     2881 aagctctcac catacctggg gcaatgtcgg ttattacatc agcgcctacc aaaagtttat
     2941 caatattatt ggtgcaacga tgacgatgct caacccggat agctgggaag gttggtattg
     3001 ggggggaatg catcattacg gtaactcaat gcgtaatggg gcggcggaaa tatatggcca
     3061 ggtcgaggac tgtctgcagg aggctgagat gatcgtctac tggtcgagcg atcctgaagt
     3121 taccggcggt gtctatggct ctttcgaagg taccgtccgc cgtcaatggg ccaaagagct
     3181 cggcatcgag atggtgcaca ttgatccgtt cttgaacgaa actgcggctt tcatgggtgg
     3241 taaatggctg gccccacggc cgacaaccag cccggctatg gcccatgcga tcacctatgt
     3301 ctggatcaag gaagatcttt acgacaaagt ctatgtcgaa agccggacaa ctggtttcga
     3361 taaatggcgc gcttatatca tgggcgacga tgatgaaggt gtagccaaga cgccagaatg
     3421 ggcggaagct gaaaccggcg tgccggcgcg tgaaatccgg gctctggccc gtcaatgggg
     3481 cagtaagaaa acctatctgt cagccggttc aatgggaaca acgttgggtg gtgcttgccg
     3541 ttcggcaaca ggcgcgcaat gggcgcgctc aatgatttgt ttgatggcga tgcagggctt
     3601 gggtaagccc ggcatcaatt ttggtggcct gcaattcggc tccccaattg attataattt
     3661 ctattttccg ggctatgccg aaggcggctt ttccggtgac agtatgaact cggcctccgg
     3721 cgtttcactt tatcagcgta tgcctcacct tattagtgtg aacccgacca tgcagtcgat
     3781 accacggctt aaaatgccgg aagcgctgat agagggcaaa gccgaaggct atccgatcga
     3841 tatccgctcc atcgaggcgc agttcttccc cgtgcattac ccgtcgcccg gtcattcgcc
     3901 ggtcaagatg atgtacaaat acggctcatc ctatatcagc acccagccgg acagtaaccg
     3961 ctatgttaaa atgtatcaga atgaggatct cgaatttgtt gtcagccaaa ccatctggaa
     4021 cgagggtgaa gttaagtttg ctgatgtgat tctgcccgcc tgtaccaatt tcgagcgctg
     4081 ggatatcggc gagtgggcca atccgggcgg ttatggttat gattggattg gccagcttaa
     4141 ccatcgggtt atcagcatcc agcataaatg catcgagcct ttgggtgagt caaaatccga
     4201 ttatcaaatt ttccatgacg tttgcgcccg gctcggtcac gccgcctatt ttaccgaggg
     4261 caaccgtgaa attgattggg tcaagcgtat gttcgatgcc tctgatttgc ccaaacatat
     4321 cagttgggaa aagtttcgca ccaaaggcta tttcgttgtg ccggcggaaa aagaaaagct
     4381 gcggcctcca acgtcctata aatggttcgc cgatggcaac aagaaaaacg tgccggagcc
     4441 gcaaccgttg ccgggttctt acggcgagga ttttctcgaa ggtctgcaaa ctcaatcggg
     4501 caagatcgag tttgaaagcg aaagcctgaa gcgttacggc aatgatccgg aacgtccgcc
     4561 gctcaataaa tatattccgt cctgggaggg tattcatact agcgagttgt tcgcgaaatt
     4621 cccgctgcaa ttaatctcgc cgcacgctcg ctatagcttc cacaccaagg gtgacggtaa
     4681 ggacagcgcg gttaatgaca tcaaggatca ccgggttaat atcgacggct atttctattg
     4741 gctggtacgg atcagcgcta ctgacgccaa agcccgcggt attgaagaga acgatctggt
     4801 gaagctctat aatgaccggg gcgctgttat ttgtgccgcc cggattactg agcgcttgat
     4861 gccgggaatc attcattgcc gccaggcctc ggctgtttat gatccgttgg gtaagcccgg
     4921 ctattcagcg gatcgtggcg gctgtgtcaa tttgctgaca ccgaagcgca tgcaaacgga
     4981 gaaggttcat tcggcggctt ataattcctg cttgatcgag attgaaaaat gggaccgcat
     5041 agacgccatt aacggtgatg cagcgtctgc cgccgaatcg cagccagaat caatggttcc
     5101 ggcagaatag gttcaggaaa aaaatcatga aaaaatggaa cctgattgtc gacgtcgcca
     5161 aatgccacaa ctccaataac tgctttttgt cggtcgctga tgaatatgtc ggcaacgaac
     5221 atccaggcta cgcgacggcg atgccgctac atggacatca ttggatcgat atcaagcgca
     5281 aggaacgcgg ccaggcgccg atggttgatg tcacctatat gccaacgacc tgcaatcatt
     5341 gtgatgaagc gccgtgcgtg gcggcagctg aaaacaacgc catcaccaag cgtctggacg
     5401 ggctggtcat tattgatcct gaaaaagccc agggccaaaa gcagctggtt gatgcctgcc
     5461 cctatggcgc catttggtgg aacgaggaaa aagaagtgcc gcaggcctgg atttttgatg
     5521 ctcatctatt ggatcggggc tggaaagaac cccgcccggt ccaggcgtgt ccgaccgggg
     5581 cgctcaaatc cgtccaggtt gaagatactg agatgcagaa aatggtcact gacgaagaat
     5641 tgcaggtatt gcatcccgag cacggcacca agcccagggt ctattacaaa aacctcaatc
     5701 tttttttcaa gtgctttatc ggcggcagtg ttatcgctga tatcgacggc gtcgaagaat
     5761 gtgtcgaaaa agctatcgtg cttctcagca aagacggtca caaaatcgcc gagacccgga
     5821 gcgacgcctt cggtgatttc aaaatcgatg acttggagcc cggcagcggc aattacgaga
     5881 tcgaagtttc ccacccggac cactcgtcaa aatacgtcga ggtcacgctc agcgacagca
     5941 cctatgtcaa ggtggtgaag ctggggtagt tgccggaaag ttgccgattt tttccgtcga
     6001 ttaattagcg gctcatgttc tcaagtatga taatcaagac cacgataacc acagcgacgc
     6061 cttgcagggc gacccttaat ctcatcattt gatttcgaaa aataagctcg tcctttatcg
     6121 ccatatagta ccctgcctgc tttgcggatt attaaaccgg caaattagat gacagtcacc
     6181 tatatattaa attttagatg ctcgtagtgc ttcttcggcg aggcgggcaa ccggtttgtc
     6241 gttgatcggg aaatgggcca aggtcgccaa caggcctagg ataataccgc cccagaaaat
     6301 tggatcgtag ctgccggtgg tatcgaatac ccaaccgcca agccagatgc ctaaaaagct
     6361 gccgatctga tggccaagga aagtaaagcc aaccaatgtc gccatatatt gagtaccaaa
     6421 aatttgcaca actaagccgg tcgtcaacgg caccgtgccc agccataaca tgcccatagc
     6481 ggcagacaga acaaccaccg ttaagatgtt catcggtagc agaataaagc ccagcatgac
     6541 cagggcgcga agactataca gcgacgccag caacatcttc tttgaagt
//
LOCUS       DASCNL010000647         2060 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001343874, whole genome shotgun sequence.
ACCESSION   DASCNL010000647 DASCNL010000000
VERSION     DASCNL010000647.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001343874"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(88..1245)
                     /gene="dapE"
                     /locus_tag="QF359_08675"
     CDS             complement(88..1245)
                     /gene="dapE"
                     /locus_tag="QF359_08675"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HJO87021.1"
                     /translation="MATINALDLTRAMIACPSVTPEDGGTQKVLQDALAGLGFTCHSQ
                     TFSDDNTPDVSNLYARLGSTSPNFCFAGHTDVVPVGDLDSWEDDPFSAEVKDGMLYGR
                     GAADMKSAIACFAEATSRFLENHGSDFGGSISFLITGDEEGPAINGTRKLLEWAKAEG
                     EVLDACLVGEPTNLTELGEMIKIGRRGSLNGTLTVRGVQGHTAYPHLGDNPIHRLVKM
                     LSVLTNEPMDDGTDHFQASTLQISTVDVGNPASNVIPAKAIAVFNIRYNDLHTSATLE
                     SWLRKKLDAVGGEYDLNIYVSGESFLTQPGPLSKIIAGAVQSVTGNAPELSTTGGTSD
                     ARFIKDYCPVAEFGPIGQTMHKSNECIAVQDLAALTDIYTAVLERFFEKSS"
     gene            complement(1255..>2060)
                     /gene="dapD"
                     /locus_tag="QF359_08680"
     CDS             complement(1255..>2060)
                     /gene="dapD"
                     /locus_tag="QF359_08680"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HJO87022.1"
                     /translation="RDGINSETTGEVREAVEAALDLLDSGQERVAEPIAGSNSGWQVN
                     QWLKKAVLLSFSLNGMKTITNSPGDGNWWDKVPSKFSGWTDAEFSAAGFRAVPICVVR
                     RSAYIAPGAVLMPSFVNLGAYVDEGAMIDTWATVGSCAQIGKNCHISGGAGIGGVLEP
                     LQADPVVIEDNCFVGARSEVAEGVIVETGAVLSMGVFIGASTKIIDRATGELHQGRVP
                     AYSVVVPGSLPGKDLPDGSAGPSLYCAVIVKTVDEGTRAKTSVNELLRD"
BASE COUNT          518 a          573 c          504 g          465 t
ORIGIN      
        1 aaaaagccat cccgctggta tcgccgcgag ctaaatgtaa tgcgccgtaa agcgatctaa
       61 taatttcact taaaggagcc atttaattta actgcttttc tcgaaaaagc gttccagcac
      121 cgcggtgtag atatcggtca gcgcagccaa atcctgcacc gcaatacatt cgttagattt
      181 atgcatggtc tggccgatcg ggccaaactc agccaccgga cagtaatcct tgataaagcg
      241 cgcatcagag gtgccaccgg tggtgctgag ctcaggtgca ttgccggtga ccgactgcac
      301 cgcaccggca atgattttac taagcggtcc cggctgggtt agaaagcttt cgccagatac
      361 atagatattc aaatcgtatt caccgcccac cgcatcaagt ttttttctaa gccagctttc
      421 aagcgtcgcc gaagtatgga gatcattgta gcggatgtta aagacagcaa ttgcttttgc
      481 cgggatcaca ttgctcgctg gattgccaac atcgaccgtg gatatttgca aagtggaggc
      541 ctgaaaatga tcagtaccgt catccatcgg ctcattggtt aaaacactca gcatttttac
      601 caagcggtga atcggattat ctcccaaatg gggataggct gtatggccct gcacgccacg
      661 aaccgtgaga gtgccgttga gactgccgcg gcggccgatc ttaatcattt ccccaagctc
      721 tgttagatta gttggctcgc cgaccaaaca ggcgtcgagc acttctccct cggctttggc
      781 ccactccagc aatttgcgag tgccattaat ggccgggcct tcttcgtcac cggtgattag
      841 gaatgaaata gagccgccga aatcactgcc atgattctca agaaaccgcg acgtagcttc
      901 ggcaaagcac gcgatggcgg atttcatgtc ggcagcaccc cggccataga gcatgccgtc
      961 tttaacttcg gcgctaaacg gatcatcctc ccaactatcc agatcaccga ccggaactac
     1021 atcggtgtga ccggcgaaac aaaaatttgg tgaagtagag ccaagccgtg cataaagatt
     1081 actcacatcc ggtgtattgt catcggagaa tgtttggctg tgacaggtaa aaccaagacc
     1141 cgccaaagcg tcttgtagca ctttttgggt gccaccatcc tcgggcgtaa cgctcgggca
     1201 tgcaatcatg gcgcgggtta aatctaatgc atttatcgtt gccacagaag ttatttagtc
     1261 tctcaataac tcattgacgg aagttttggc gcgcgtacct tcgtcgacgg ttttaacaat
     1321 tactgcacaa taaaggcttg gcccggctga gccgtcgggt aaatccttgc ccggcagcga
     1381 gcccggcacg acaaccgaat aagccggaac ccggccttga tgtagttcac cagttgcgcg
     1441 gtcgataatt ttagtcgaag caccaatgaa cacacccata gacaggacgg cgccggtttc
     1501 gacaatcacc ccttcagcaa cttccgagcg tgcaccgaca aagcaattat cttcgataac
     1561 aaccggatca gcttgtaacg gttcaagcac gccaccaatt ccggcaccgc cggaaatatg
     1621 gcagttcttc ccaatttgag cgcacgagcc aaccgttgcc caggtatcga tcatggcgcc
     1681 ttcatcaaca taggcgccga gattaacaaa agacggcatt aacaccgcac ccggcgctat
     1741 ataggcagaa cggcggacaa cgcagatggg caccgcccgg aatccggcgg cggaaaattc
     1801 cgcatctgtc cagccggaga atttagacgg aactttatcc caccaattgc catcaccagg
     1861 gctattggtg atggttttca tgccattgag gctaaacgac aagagcacgg cttttttgag
     1921 ccattgattc acttgccagc ctgaattgct gccggcaatc ggttcggcga cacgctcttg
     1981 gcccgaatcg agcagatcaa gcgccgcttc aaccgcctca cgcacctcgc cggtcgtttc
     2041 cgaatttatg ccatcgcgcg
//
LOCUS       DASCNL010000648         2427 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001344103, whole genome shotgun sequence.
ACCESSION   DASCNL010000648 DASCNL010000000
VERSION     DASCNL010000648.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001344103"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            183..2048
                     /locus_tag="QF359_08685"
     CDS             183..2048
                     /locus_tag="QF359_08685"
                     /inference="COORDINATES: protein motif:HMM:NF012869.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87023.1"
                     /translation="MSDIGHNITHGSAASTGNLRGEEMFGVVFDGNIIRRFIEFVKPY
                     RKTIYVAFAAVIVYTFTQISIPLLIRDAVDSTVGVGRGDYELLILAVQIFFGVVTINY
                     ISNYFQLTIVAKLAERILIDLRRAMFVHLQEVSLSFMDKTEVGRLMSRLQGDVNSIQE
                     FLETSIFAIGDFILLIGIIVVLLTLDWQLGLLTLSVVPALFIVRMVWLPIAKKAFMRA
                     RETSSIVNGALAENINGVRTVQEMTRQSVNFDAYEEKAHDNLRAHLKAVKLAQIMVPT
                     VDTLTGSAMAIVIIVGGNLVLKDSLDLGVMVAFLFYVQRFFDPIRSLTMQYSVMQRAM
                     ASGQRIFEVLDVKIEVEDKPDAEPIGDTDGSVIFKNVTFGYLPDQPVLKNLNFEIKPG
                     ETVALVGPTGSGKTSTTALLHRFYDIWEGEISIGGKDIRDVTQDSLGDTVAMVLQEPF
                     LFTGTVFENIRYHKLDATQQEVETAAKAVGAHDFIEKLPDGYNTILGQRGGSLSIGQR
                     QLISFARAIVADAKILVLDEATANIDSFTERQIQEALAVMLEGRTGIVIAHRLATVKG
                     ADRIMVLQDGKIIETGSHDELMAMDSMYHRLYTLNYASFDDLPDELIKEALDFKS"
BASE COUNT          587 a          550 c          634 g          656 t
ORIGIN      
        1 cgaccattgt gatttcgcat cgcctcagct cgctcatgta tgccgacgaa atattgtttc
       61 tcgacgaagg cagcattatc gagcgaggta gccacgatag cctgttagaa tttaatggac
      121 gctaccgcgc actttacgag ctgcaggctg gactatctgc caaggaggcc aaaggctagg
      181 tcatgtcgga tattggacat aatataaccc atggcagcgc tgcatcgaca gggaatctgc
      241 gcggcgaaga gatgtttggc gtcgtgtttg acggcaacat cattcgccgt tttatcgagt
      301 ttgtaaaacc ctacaggaaa acaatatatg tcgccttcgc agcggtcatt gtctacacct
      361 tcacgcaaat ctctattcca ttgctgatac gtgatgcggt cgacagtact gtcggcgtgg
      421 ggcgaggcga ttatgaactg cttatcttgg cggtgcagat tttctttggc gtggtcacga
      481 tcaattatat ttcaaattat tttcagctca ccatagtcgc caagctggct gagcgcatcc
      541 tgattgatct ccgccgagcg atgtttgtcc atctccagga agtctcactg tctttcatgg
      601 ataagaccga ggtcgggcga ttaatgtcgc gcctgcaggg tgatgtaaat tcaatccagg
      661 aatttctcga aacctcgatt ttcgccatcg gtgattttat tctgttgatc ggcattatcg
      721 tagtgctgtt gactttagac tggcagttgg gattgctgac cctatccgtc gtgccggcgc
      781 tgtttattgt tcgcatggta tggctaccga ttgccaagaa agccttcatg cgagcgcggg
      841 aaacgtcatc gatagtcaat ggcgccttgg ctgaaaacat taacggtgtc aggacggttc
      901 aggaaatgac acgccaaagt gtcaatttcg acgcctatga ggagaaagct catgataatt
      961 tacgggctca tctgaaggcg gtaaaattgg cgcagataat ggtgccgacg gttgatacct
     1021 tgaccggttc ggcgatggcg attgtcatta ttgtcggcgg taatttggtg ctcaaagaca
     1081 gtctcgatct aggcgtcatg gtggcgttcc tattctatgt acaacgcttc tttgatccga
     1141 tccgctcgct gaccatgcaa tatagcgtca tgcagcgggc tatggcttca ggccaacgta
     1201 tcttcgaggt tctcgatgta aaaattgagg ttgaggataa gccggatgcg gaacccatag
     1261 gcgataccga tggctcggtg atttttaaaa atgtcacctt tggctatctg ccggatcagc
     1321 cggtgcttaa aaaccttaat tttgagatta agccgggtga aaccgtcgct ctggttgggc
     1381 caaccggatc gggcaaaact tcgacgacgg ctttactgca ccggttttac gatatctggg
     1441 aaggtgaaat tagcattggc ggcaaagata ttcgggacgt tactcaagac agcctgggtg
     1501 acacagtggc gatggtgtta caggagccat tcctgtttac cggtaccgtg tttgaaaaca
     1561 ttcgctatca taaattagac gccactcaac aagaagtgga aacagcggcg aaagccgttg
     1621 gcgcccatga ctttattgag aaactgccgg acggctataa caccatcctt ggccaacgcg
     1681 gtggcagctt gtcgatcggt caacggcaac ttatcagctt tgcccgggcc atcgtggcag
     1741 acgcaaaaat attagtgctg gatgaagcaa ccgccaatat tgacagcttt actgaacggc
     1801 aaattcaaga agccttagcc gtgatgctgg aagggcggac cggtattgtt attgctcatc
     1861 gcctggcgac tgtgaagggt gcggatcgta ttatggtttt gcaggacggc aaaattatcg
     1921 aaaccggtag tcatgatgaa ttgatggcga tggatagcat gtatcatcgg ctttatacgc
     1981 tgaattacgc ctcgtttgat gacctaccgg acgagctgat caaggaagcg ctcgatttta
     2041 agagctaatc tgtaaattat ttctcgaact gggtagcgat atcctgcgct gtggtttgta
     2101 agtcttcgag atagtcatcg actatttctt taattgaggt ggcttttctg gtccaggcca
     2161 gcgtaatgca gagcccagca cgccctttgt cgccagaatt ggtacagcaa ctgcatccag
     2221 gctgtcatca aagcttgatt tcagtggatt ttgaccgccg ccaaaagatg gcttgcgggt
     2281 ggcatagcca gcttggcgaa tttcatcgaa gattttatta aatctcgcgt cgtttttgac
     2341 actgcagttg gcgatactgg tatatttttt agccgcccaa ttatctccaa tttttcatca
     2401 tcaccgcaga aagcggaaaa tcaatca
//
LOCUS       DASCNL010000649         1195 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001346059, whole genome shotgun sequence.
ACCESSION   DASCNL010000649 DASCNL010000000
VERSION     DASCNL010000649.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1195)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1195)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1195
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001346059"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1195
                     /locus_tag="QF359_08690"
     CDS             <1..>1195
                     /locus_tag="QF359_08690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HJO87024.1"
                     /translation="RDEPPDIDVDFEHERREEVYQYIYEKYGRDRAGITATHITYRSR
                     SAFREIGKVMGLSEDSIQVLSSSSWGSPSRDRPSDDRIRENGLDPNDVTLRMVLNLSQ
                     QIARFPRHLSQHTGGFVITKDPLDSVVPIENATMDDRTVIEWDKNDLNALNILKIDVL
                     ALGMLTCIRKAFDFIEQHHVVKLTLANIPTGDKDTYDMLCLGDSIGVFQVESRAQMNM
                     LPRLKPRCFYDLVIQVAIVRPGPIQGNMVHPYLRQRSGEEEVKYPSEDLRNVLEKTKG
                     VPLFQEQAMQIAIVAAGFTPSEADGLRRAIATFRHTGNILLYHDRMINGMVERGYDAD
                     FAERCFKQIEGFGEYGFSESHAASFALLVYVSSWLKCHYPAAFTAAILNSQPMGFYKP
                     AQIVR"
BASE COUNT          277 a          329 c          309 g          280 t
ORIGIN      
        1 aacgggatga gccgccggat atcgacgttg attttgagca tgaacgtcgg gaagaagtct
       61 atcagtatat ctacgagaaa tatggccggg accgggccgg tatcacggcg acgcacatta
      121 cctatcgttc ccgcagtgct ttccgcgaaa tcggcaaggt tatgggctta tcggaggatt
      181 ctattcaggt gttatccagc tcatcctggg gcagccccag ccgcgaccgt cccagcgatg
      241 atcgtatccg cgaaaacggc cttgatccca atgacgtaac gctgcgcatg gttttgaacc
      301 tatcccagca aatcgcccgg tttccccgcc atctcagtca gcatactggt ggttttgtca
      361 tcactaaaga ccccctcgat agcgtcgtgc cgatcgaaaa tgcgacgatg gacgatcgta
      421 ctgtcatcga atgggataaa aatgatctca acgccctgaa tatcttaaaa atcgatgtgc
      481 tggcgctcgg tatgctgacc tgtatccgca aagcctttga tttcattgag cagcaccacg
      541 tggtcaagct aaccctcgcc aatattccaa ccggcgacaa agacacctat gacatgctgt
      601 gtctgggaga ttctattggt gtcttccagg tcgaaagccg ggctcaaatg aacatgttgc
      661 caaggctcaa accccgttgt ttttatgatc tggtgatcca agtggcgatt gtccgcccgg
      721 gcccgatcca gggcaacatg gtgcatcctt atctccggca gcgcagcggt gaagaagagg
      781 tcaagtatcc gtccgaggat ttgcgcaatg tgctggaaaa aaccaaaggc gtgccgttat
      841 ttcaggaaca agcgatgcag atcgccattg tcgccgccgg ttttactccc agcgaagctg
      901 atggactcag gcgtgccata gcgacgttcc gccatactgg caacattctg ctctatcatg
      961 accgcatgat caacggcatg gtcgaacgcg gctatgatgc ggatttcgcc gagcgctgtt
     1021 tcaaacaaat cgaaggcttt ggtgaatatg gcttctcgga atcccacgcc gccagcttcg
     1081 ccctgctggt ctatgtctcg tcctggctca aatgccatta tccggcggcg tttaccgcag
     1141 cgatcctcaa cagtcagcca atgggttttt ataagccggc ccagatcgtc cgcga
//
LOCUS       DASCNL010000650         1418 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001348269, whole genome shotgun sequence.
ACCESSION   DASCNL010000650 DASCNL010000000
VERSION     DASCNL010000650.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1418)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1418)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001348269"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1388
                     /locus_tag="QF359_08695"
     CDS             <1..1388
                     /locus_tag="QF359_08695"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HJO87025.1"
                     /translation="QNFTGFMSLEDERRIGAKEHPKILKSFGGAYKDQAVTAYVNNIG
                     NQLAVRSELPNIKWTFTVLNSPQINAFALPGGYIYVTRGLMALAGSEAELAGVIAHEI
                     GHVTGRHTAQRHSKATGASIMGAILGIAVGSRAVSELFNVGADLYLQSFSREQEFEAD
                     SLGVRYLSRTNYDTKSMVSFLSKLRSHSQLEAKRHEKDPSSVDQGDMFATHPRTIDRV
                     ERAIKNVKGTKSGARLGTVDYMELLHNMLYGDDPKEGFIKGHTFIHPELRFRFDVPKS
                     FRLFNSPRAVVAKGPGGSIIQFNIAGKPYSGAMTSYIPNVWARRSSFKRVERITVNGL
                     QGATATARVRQRSGTFDLRFVAIRQKMNRSDDRIYRFMFLTPVNLTDRLSLGLRKTTF
                     SLRSISFTEAQQSKPTRILVKPVRAGDGIQTFIRQMNIDDFKEETFRVINGLAANDNL
                     RRGKLVKIISE"
BASE COUNT          340 a          357 c          367 g          354 t
ORIGIN      
        1 atcaaaactt cactggcttt atgtcgctcg aagatgagag gcgcattggc gccaaggaac
       61 atccaaaaat tcttaagtct ttcggtggtg cttataagga ccaagccgtt accgcctatg
      121 tcaataatat tggtaatcaa ctggcggtga gatctgagct gccgaacatc aaatggactt
      181 ttacggtgtt aaattctccc cagattaatg cctttgcctt gccgggcggc tatatctacg
      241 tcacccgcgg cttgatggcc ctggccggca gtgaagccga actggctggt gtgatagcgc
      301 atgagatcgg gcatgtcacc ggccgccata cggcgcagcg tcatagcaaa gcgacggggg
      361 cttcaattat gggtgccatt ctcggcattg ccgtcggctc ccgcgcggtt agcgaattgt
      421 tcaatgtcgg ggcggatctt tatctccagt ctttttcgcg ggagcaggaa tttgaagccg
      481 attccttggg tgtccgctat ttgtcgcgga ccaattacga cactaaatcg atggtgagtt
      541 ttttatccaa gctgcgctcg cacagccagt tggaagccaa gcgccacgaa aaagatccct
      601 ccagcgtcga tcagggcgat atgttcgcga cccacccccg aacaattgac cgggtggaac
      661 gcgcaattaa gaacgtcaag gggactaaat ccggcgcccg gctcggcact gtggattata
      721 tggagctctt gcataatatg ctatatggcg acgatcccaa agaaggcttt attaagggcc
      781 acaccttcat tcatcccgag ttgcgatttc gcttcgacgt acctaaaagt tttcgtttgt
      841 ttaatagccc tcgtgccgtc gtcgctaaag gcccgggcgg ctcaatcatc cagtttaata
      901 ttgccggcaa gccctatagt ggtgcaatga cgtcctatat cccaaacgtt tgggcgcggc
      961 ggtcaagttt caagcgcgtt gagcggatca ccgtcaacgg cttacaagga gcgaccgcga
     1021 ctgcccgggt acggcaacgc agcggcactt ttgatctaag atttgttgcc atccgtcaaa
     1081 aaatgaatag gagtgatgac cgtatttacc gctttatgtt tttaacgccg gtgaatttga
     1141 ccgatcgcct gtcgctggga ttgcgtaaaa cgacttttag tctgcgctcg atatctttca
     1201 ccgaagcgca acaatctaaa ccgacacgga tattggtaaa gccggtgcgc gccggcgacg
     1261 ggattcagac ctttatccgc cagatgaata ttgatgattt taaggaagaa actttccggg
     1321 tgatcaacgg cttagccgcc aatgataatc tgcgccgcgg caagctagtc aaaataatct
     1381 ccgagtaaaa gtgttaattt atcaactttt gagactgc
//
LOCUS       DASCNL010000651         2058 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001350836, whole genome shotgun sequence.
ACCESSION   DASCNL010000651 DASCNL010000000
VERSION     DASCNL010000651.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001350836"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="QF359_08700"
     CDS             <1..288
                     /locus_tag="QF359_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87026.1"
                     /translation="AILQPAKNITKGFETYVVVKKNGRKVVGLKAGEEDGTIELVTKD
                     GDEVSIKKSDIKEITQDKLLSVMPDDLSEEMTVKDYQDVLSFMLMQKGKKK"
     gene            304..1269
                     /locus_tag="QF359_08705"
     CDS             304..1269
                     /locus_tag="QF359_08705"
                     /inference="COORDINATES: protein motif:HMM:NF024834.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJO87027.1"
                     /translation="MSKFKINRFWSVVATILVIYGIVKWIIPAVSRNITSLPFPLTVP
                     GTLVFIYMTLTCVALFALVTFSDEFLEEFWGPIRKMLRGEYTKAFRLVVLVVVPLIVG
                     WQIYDITVPKVQLPSSLRIQHPSSNFPKKFEAIKNPFNEPSKERVAAFIEQVKEDEIK
                     FIPQVQKDIDTWKEEADPDHTLQFLPGEPVKKLLAELKAEKITEATAKQALHQIDLFE
                     GRALYAMNCRPCHGDSVAGDGPMADGFKLRPINFTDNGTIETIVEGYTFWRVMNGGPG
                     LPTEATPWDSAMPEWKKNLTDEERWKIILAEYDLAEKTPRIPESE"
     gene            1302..>2058
                     /locus_tag="QF359_08710"
     CDS             1302..>2058
                     /locus_tag="QF359_08710"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJO87028.1"
                     /translation="MKFTFAAVIALSALFNSPVLAADVAAKPMPEATEEFVEKGREIY
                     IRRCSMCHGLLGDGNGPAADYMDPRPRDFTLGTFKFRKTQSGELPTDADLFRTVSRGL
                     QGTGMQAFDSEIIKNGLSEEKRWQVIAYIKTFAQEFGDEELDPIKTNKLVSLPSNLPP
                     YNDELIAKGKEIFLKAKCWECHGKQGRGNGQKAFDRKDDWGFPIRIRNVTLPWKIKGG
                     SNVEDIYMRFSTGINGTPMPSFAKALSNEDRWAL"
BASE COUNT          559 a          479 c          534 g          486 t
ORIGIN      
        1 gcgatcctcc aaccggccaa gaacatcacc aaaggttttg agacttatgt cgttgttaaa
       61 aaaaacgggc gcaaagttgt tggcctaaaa gccggtgaag aagacggtac aattgaactg
      121 gtcactaagg atggcgacga agtttcgatt aagaaatctg acatcaagga aattacccaa
      181 gacaaactgt taagcgttat gccggatgat ctgtctgaag aaatgaccgt gaaggactat
      241 caggatgtcc tttcattcat gttgatgcaa aaaggcaaga aaaaataagg cggatgaaca
      301 aagatgagta aatttaaaat aaatcgtttt tggtctgtcg tcgcgacaat tctggtgatc
      361 tacgggatcg tcaaatggat aatcccggca gtatcccgaa atattacctc attgccgttt
      421 ccgctcaccg tgccgggcac cctggttttt atctatatga ccctgacctg tgttgcgctg
      481 tttgccctgg tcactttttc cgatgagttc cttgaagagt tctggggccc gatccggaaa
      541 atgctgcggg gtgaatatac caaagctttt cgtttggtgg tattggttgt ggtgccgctg
      601 attgtcggct ggcagattta cgacattacc gtaccgaagg tgcagttacc gtcgagcctg
      661 cgtattcagc atccgtcatc caatttccca aagaagttcg aggccataaa aaatcccttt
      721 aatgaaccga gtaaggaacg ggttgccgcc ttcattgagc aggtgaaaga ggatgaaatc
      781 aaatttattc cgcaagtgca aaaagacatc gatacctgga aagaagaagc cgatcccgac
      841 cataccttgc aattcctacc tggtgaaccg gtcaaaaagc tactggctga attaaaagcc
      901 gaaaaaatta ccgaggcgac ggccaagcag gcgctgcatc aaatcgatct ctttgaaggt
      961 cgggcacttt acgccatgaa ctgccgcccg tgtcacggtg atagtgtggc cggtgacggt
     1021 ccaatggcgg atggtttcaa gctgcgcccg atcaacttta ccgataacgg taccatcgaa
     1081 acgattgtcg aaggttacac cttctggcgg gtgatgaacg gtggaccagg cctgccgacc
     1141 gaggcgacgc cttgggattc agccatgccg gaatggaaaa agaacctcac cgatgaagaa
     1201 cggtggaaaa taattttggc ggaatacgac ctcgccgaaa agacgccacg aattccggag
     1261 tctgaataat gcggggcagc ttgagaaata aagcgaccat tatgaaattt acttttgctg
     1321 ccgttatcgc gctttcggca ctttttaact cgccggttct tgcagccgat gtggcggcaa
     1381 aaccgatgcc ggaagcgact gaagaattcg ttgaaaaagg acgcgagatc tatatccgcc
     1441 gctgctcgat gtgccatggg ctgttgggcg atggtaatgg cccggccgcc gattacatgg
     1501 atcctcggcc gcgtgatttc actctcggta catttaagtt tcgtaaaacc caatcgggtg
     1561 agctgccgac cgatgccgat ctgttccgca cggttagccg tggccttcag ggcaccggca
     1621 tgcaggcttt cgatagcgaa attattaaaa atggcctgag tgaagagaaa cgctggcaag
     1681 tcatcgccta catcaagact ttcgctcagg aattcggtga tgaagagctt gatccgatta
     1741 aaaccaacaa gctggtcagt ttgccatcaa acctgccgcc ttataatgat gagctgattg
     1801 ccaagggtaa agaaattttc ctaaaagcca aatgctggga atgtcatggc aagcaaggcc
     1861 ggggtaatgg ccagaaagct ttcgaccgca aagatgattg gggtttcccg atccgtattc
     1921 gtaacgtcac cctgccgtgg aaaatcaaag gtggcagtaa cgttgaagac atctatatgc
     1981 gcttttcgac tggcatcaac ggcacaccga tgccatcctt tgctaaggca ctctccaatg
     2041 aagaccgctg ggcgttgg
//
LOCUS       DASCNL010000652         3486 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001351727, whole genome shotgun sequence.
ACCESSION   DASCNL010000652 DASCNL010000000
VERSION     DASCNL010000652.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3486)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3486)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3486
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001351727"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1561)
                     /gene="dnaE"
                     /locus_tag="QF359_08715"
     CDS             complement(<1..1561)
                     /gene="dnaE"
                     /locus_tag="QF359_08715"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HJO87029.1"
                     /translation="MSHADFVHLRVHSAYSLLEGSLKVKDLVQRTKELNMPAVAITDT
                     GNLFGALEFSETCRKEGIQPIIGGQLDVTPYRLSGDDENRMSVSNASVMEDPDQIVLL
                     AQNKTGYRNILKLVSQYHLAPDGDGEPRISVGDLAAHNEGVIAFTGGSKGGVGRLLAE
                     GQNNAAEELLLRLKEIFADRLYVEIQRHNLPVEIKIEGALIDLAYKHDLPLITTNECF
                     FDTEDLYEAHDALICIDAGAYIDQLDRRRLTVDHRFKSPQEMRALFADLPEAVDNTLV
                     VAERCAVMSEPHDPLLPNAPKEGGNGDRSDAEVLFELAKAGLAVRLEAQVYQDGMVKA
                     AKETAGKPYIERLEYELGVIEEMGFSGYFLIVADFIKWSKKHEIPVGPGRGSGAGSVV
                     AWALTITDLDPLRFGLLFERFLNPERISMPDFDIDFCQDRRDEVIRYVQDKYGDDRVA
                     QIITFGTLQPRAALRDVGRVLQMPYPQVDRICKLVPNNPAAPVTLQRAIDGEPALQEE
                     IATDDRVAKLVD"
     gene            complement(2077..2748)
                     /locus_tag="QF359_08720"
     CDS             complement(2077..2748)
                     /locus_tag="QF359_08720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87030.1"
                     /translation="MSRALELKSIVQTFHQGETSLEVLRGADLQVEAGEIVALVGPSG
                     AGKSTLLQIAGLLEKPISGEVIVKGESASDLGDDHRTGIRRQELGFVYQYHHLLAEFS
                     AKENIVIPQMIAQTDKKAAGERADELLATMGLTDRATHRPARLSGGEQQRVAIARALA
                     NKPNVLLADEPTGNLDQATADSLFGLLTDMVEQTGIGALIATHNLDLANRMNRIVRLE
                     DGVLA"
     gene            complement(2741..>3486)
                     /locus_tag="QF359_08725"
     CDS             complement(2741..>3486)
                     /locus_tag="QF359_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HJO87031.1"
                     /translation="ISPKGNVTAFGTVPRMKAYKVAAIFNVGMHEYDSSFIFMPLSAA
                     QVYFKLKGAVSYLDVVIKDPDRAPSMARDVWIKLDNMGRVYDWQRTNSSFFNAIQIER
                     NVMFLILTMIIVVAAFNVISSLIMLVKDKARDIAILRTMGATRGMIMRVFLISGASVG
                     VIGTIAGFALGLAFAENIETIRQWLQGLTGTDLFAAEIYFLSRLPAVVDPAEVTAIVL
                     MGLGLSFLATIYPSWRAARLDPVEALRYE"
BASE COUNT          884 a          956 c          837 g          809 t
ORIGIN      
        1 tatcaaccag cttggcaacc cggtcatcgg tcgcgatttc ctcttgcaag gcgggctcgc
       61 catcaatcgc tcgttggagt gtcactggag cggccggatt atttggcacg agcttacaga
      121 tacggtcgac ctgtggataa ggcatttgca gaacgcggcc aacatcacgc agggcagcgc
      181 gcggctgcaa cgtgccaaaa gtaatgatct gagccacgcg atcatcgcca tatttatcct
      241 gcacatagcg gataacttca tcccgccggt cttggcaaaa gtcgatgtca aagtccggca
      301 tcgaaatccg ttcggggttc aagaaacgtt caaacagcag accaaagcgt aagggatcca
      361 aatccgtgat ggtcaacgcc caggcaacca ccgagcctgc acccgaccca cggcctggcc
      421 ccaccggaat ttcatgtttc tttgaccatt tgataaagtc agcaacgatt agaaaatagc
      481 ccgaaaagcc catttcttcg ataacgccaa gctcatactc cagacgctca atgtaaggtt
      541 tgccagcagt ttctttcgct gccttaacca taccatcctg ataaacctga gcttcaaggc
      601 gtacagccaa gcctgctttt gccaattcaa acaatacctc ggcatcggaa cgatcgccgt
      661 taccaccctc cttcggagca ttcggcagca atggatcgtg cggttccgac atcacggcgc
      721 agcgctcggc aacaaccaag gtgttatcaa ccgcttcggg caaatcagca aacagcgctc
      781 tcatttcttg gggtgattta aaacggtgat caacggtcaa gcgccgccgg tccaattgat
      841 caatatatgc gccggcatcg atgcagatca gtgcatcatg ggcttcgtaa agatcctcgg
      901 tatcgaaaaa gcattcattg gtcgtaatca gtggcagatc gtgtttgtaa gcgagatcaa
      961 tcaacgcacc ctcgatttta atctcaaccg gtagattatg acgttgaatt tcaacataaa
     1021 ggcggtcagc gaagatttcc ttgagccgta gcaagagttc ttccgccgca ttattttgcc
     1081 cttccgccag taaccttcca actccgcctt tcgagccgcc agtaaaggca atcacaccct
     1141 cattgtgtgc cgctagatca ccaaccgaga tacgcggttc accatcccca tccggggcca
     1201 aatgatactg gctgacaagt ttaagaatat tgcgatagcc ggttttattt tgcgccagca
     1261 gaacaatttg atccgggtct tccatcacac tcgcgttgct gacactcata cgattttcgt
     1321 catcgccact gagccggtaa ggtgtcacat cgagctggcc accgataatt ggctggatgc
     1381 cttccttccg gcaggtctcg gaaaactcca gcgcgccgaa taggttgccc gtatcagtga
     1441 tggcaacggc cggcatgttg agctctttgg tgcgctggac caggtcttta accttgagcg
     1501 agccttccag caaagaatag gcggagtgta ctcggagatg aacaaaatca gcgtgcgaca
     1561 tgcctaagag agttccacga ttctcctggt gctgtcatca cctaatatga ccttatccac
     1621 aggaaagttt tccttcgcca tgccggactt gaccagaatc tagaaagtag cagattgaat
     1681 tttcacctat aaaaaactgg gcaccggatc atgcccgggg tgacgcaggg aagcttgccc
     1741 tccctcacaa aaagttcgaa gagtgatgat tcatgaaaaa tatggctata cggaaaacca
     1801 gtagtttcgg tatgccttca ttttcacatc ttcttcgtgc tctttgttaa cttcgtggtt
     1861 cattaattta cagacacgtt cctaaattgg tgagtttgaa gagccaaact aagatcagaa
     1921 acatcttgta ggcgcaacct aactgttgac gaactctcga tcaaggtgtc ccctggtctc
     1981 ggaaaaattc gcacgatgta tcatcaaatc agatatcagc gtacgggtct taataatctt
     2041 aaggtgataa ggctgcctaa aggggtgacg aattctttaa gccagcactc catcttctag
     2101 ccggacaatg cggttcatgc gattggcgag gtcaagattg tgggtggcga tcagggcgcc
     2161 gatgccggtt tgctcgacca tatcggtgag caggccaaag aggctatcgg cagtggcttg
     2221 gtcgagattg ccggtcggct catcggctaa tagcacattc ggtttattcg ccagcgctct
     2281 agcaatcgca acccgctgct gttcgccgcc agaaagccgc gctggccggt gagtggcgcg
     2341 atccgtcagc cccatggtcg cgagcaactc atccgccctc tctccagctg cctttttatc
     2401 ggtttgggca atcatctgcg ggatgacgat gttttccttg gccgaaaact cggccagcaa
     2461 gtgatgatac tgatagacaa agccaagttc ctggcggcga atgccggtgc ggtgatcatc
     2521 accgagatca ctagcgcttt cgcctttgac aataacctcg ccgcttattg gcttttcaag
     2581 caacccggcg atttgcagga gcgtcgattt tcccgccccg gacggaccaa cgagagccac
     2641 aatctcaccc gcctcaactt gcaaatcggc cccccgcagc acttccaacg acgtttcgcc
     2701 ctgatggaag gtttgcacga tgcttttgag ttctaatgct ctactcataa cgaagcgctt
     2761 ccaccggatc gagccgtgcc gcccgccaag agggataaat ggttgccagg aaagacaaac
     2821 caagacccat taaaacaatg gccgtgactt ccgctggatc aaccaccgcc ggtaatcgcg
     2881 agaggaaata tatttcggcg gcaaagagat cggtgccggt caacccctgc agccattgac
     2941 ggatggtttc aatattttcg gcgaatgcca agccaagcgc aaagccagca attgttccaa
     3001 taacgccaac gctcgcaccc gatatcagaa acacccgcat gatcatgccc cgcgttgccc
     3061 ccatggtgcg aaggatggct atatcgcggg ccttatcttt caccagcatg atcaagctcg
     3121 aaataacatt aaaggcagcg acaacaatga tcatcgtcaa gatcaggaac atcacattgc
     3181 gttcaatctg gatggcattg aaaaagctcg agttggtgcg ctgccaatca tagacgcggc
     3241 ccatattgtc aagcttgatc caaacatcgc gtgccatcga cggtgcccta tcgggatctt
     3301 tgatcaccac gtcaagataa ctcacagcac ctttgagttt gaaatacacc tgtgcggcgg
     3361 acaaaggcat aaaaataaag ctgctgtcat attcgtgcat accgacattg aagatcgctg
     3421 ccaccttgta agctttcatc cgtggcacgg tgccaaacgc ggtgacgttt cctttaggcg
     3481 aaatca
//
LOCUS       DASCNL010000653         1113 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001352275, whole genome shotgun sequence.
ACCESSION   DASCNL010000653 DASCNL010000000
VERSION     DASCNL010000653.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001352275"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="QF359_08730"
     CDS             <1..330
                     /locus_tag="QF359_08730"
                     /inference="COORDINATES: protein motif:HMM:NF042682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HJO87032.1"
                     /translation="MLKFLAALKPLRSKSAQYAEEQAAIEQWLDAVIKAAAVDNAAAV
                     DNNLAIRTSNLAIMARGYGRVRKTGLTKLNEFFADWHDKLASDPAGLSAEVDQLILLA
                     HANPDET"
     gene            350..850
                     /locus_tag="QF359_08735"
     CDS             350..850
                     /locus_tag="QF359_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJO87033.1"
                     /translation="MSEKRNKTLLHCTVNGKERDDVVKDNMLVADYLREVVGITGTKI
                     GCDGGECGCCTVLIDGVPQHACLRLTATCQDVEIETIEALAEQNRLSALQRGFHEKLG
                     TQCGFCTPGMIMAAEGLLRENPSPSEDEIRQGLAANLCRCTGYIKIIEAVQFAIDELG
                     SKGKAA"
     gene            847..>1113
                     /locus_tag="QF359_08740"
     CDS             847..>1113
                     /locus_tag="QF359_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoyl-CoA reductase subunit alpha"
                     /protein_id="HJO87034.1"
                     /translation="MNEIKPTKSIGVPTPLVDGPEKVSGKAQYSADFMPSDYLVGRIF
                     RSPVSHAEIINVDISAAQALPGVKAVITGDETDETFGILPVARFE"
BASE COUNT          293 a          267 c          293 g          260 t
ORIGIN      
        1 atgctgaaat ttttggcggc gcttaaaccc ttgcgatcaa aatctgcaca atatgcagaa
       61 gagcaggcag ccatcgagca atggctggat gcggttataa aggcggctgc agtcgacaat
      121 gccgctgccg ttgacaacaa tctcgccatc cggacctcaa atctggcaat aatggcgcgc
      181 ggctacgggc gagtgcgaaa aaccggtttg accaagctca atgaattttt tgccgattgg
      241 cacgataaat tagcaagtga ccctgcaggt ttatccgctg aggtggatca gctgatccta
      301 cttgcccatg cgaatcccga tgagacctaa tttttagtgg aagattatca tgagtgaaaa
      361 acgaaacaaa actctcctcc attgtactgt taatggcaaa gagcgcgacg acgttgttaa
      421 agataatatg ctggtcgctg attatttacg cgaagttgtc ggcattaccg gcactaaaat
      481 cggctgtgat ggtggcgaat gcggctgttg caccgtgctg atcgatggtg tgccgcaaca
      541 tgcctgcctg cgtttgacgg caacctgcca ggatgttgag attgaaacga ttgaggctct
      601 cgcggaacaa aatcggctgt ctgctttaca acgcggtttt catgaaaagc ttggcaccca
      661 atgcggcttt tgcacgccag gcatgatcat ggcggcggag ggcctgctga gagaaaaccc
      721 gagccccagc gaagatgaaa ttcgccaagg tttggctgcc aacctttgcc gttgcactgg
      781 ttatataaaa attatcgagg ccgtacaatt tgcgattgat gaattaggct cgaaaggaaa
      841 agcagcgtga acgagatcaa gccaactaaa tctattggcg taccgacacc gctggtcgat
      901 ggccctgaga aagtatccgg caaagcacaa tattcagctg actttatgcc gagcgattac
      961 ctagttggcc ggatattcag aagcccggtc tcccacgctg aaatcattaa cgtcgatatt
     1021 tcggcagccc aagcgctgcc gggtgtaaaa gccgtcatca ccggtgacga aactgacgaa
     1081 acgtttggca ttttacccgt cgcccgtttt gag
//
LOCUS       DASCNL010000654         3897 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001358419, whole genome shotgun sequence.
ACCESSION   DASCNL010000654 DASCNL010000000
VERSION     DASCNL010000654.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3897)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3897)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001358419"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(309..1817)
                     /locus_tag="QF359_08745"
     CDS             complement(309..1817)
                     /locus_tag="QF359_08745"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJO87035.1"
                     /translation="MNVMANDLKTLIPDTQRFLDQEKKHFIGGKWIAGSSGDSFSVID
                     PSNAEVLTQIPAGTAEDIDNAVQAANTALNDPMWRDMPPADRERMMHRFADLIEGHAE
                     ELGQLEALDVGMPSFVGQHVEVGNVLDTLRYMAGWPTKLNGKTMNIGEPMPDKRYFAY
                     TQREPVGVVGAIVPWNVPLMIAMWKIAPALATGCTIVIKPSEVTPLATLRLAELALDA
                     GVPPGVINVINGFGAEAGQALVEHPLVSKISFTGSAVTGKAINRTATDTLKNVTLELG
                     GKSPVILLDDANMEKAVQGISLGIFGNTGQVCVAGSRLYIQAGIFDDAVERLTKEARS
                     LKVGPGLHPETNIGPLVSEAHRDKVMGFINAGLKAGGEAVTGGSAIDGPGFYVEPTVL
                     ANPPQSSDVVQEEIFGPVITAIPFDDLDEAAALANDTTYGLSSYIWSRDIQNVHQLVP
                     KIRAGQVYVNSSPFPHPAMPMGGYKQSGIGRDLGEEVINHYTEHKSVVIGIN"
     gene            complement(1834..3492)
                     /locus_tag="QF359_08750"
     CDS             complement(1834..3492)
                     /locus_tag="QF359_08750"
                     /inference="COORDINATES: protein motif:HMM:NF006122.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HJO87036.1"
                     /translation="MIENLPKKLMSGGEAIVQSLLANDVDTVFGIPGAQTYPIFEALA
                     RVQSRIRTVGTRHEQAAAYMAFGYAKSTGRPGIYSVVPGPGVLNTMAALCTAWGANVP
                     VLCVTGQIPREAMGKLRGHLHELPDQSATLQTLTKWSVRIERAADAPEIINEAFRVMT
                     SGRPGPVSVEMCWDDMAQNEMVGLLPRAETDVPPKVKAAEIAAAAKLVKNAKKPIILV
                     GSGALHASDAVLELAETLQAPVSAFRGGRGVVAEDHELGVSTVAAHDLWRESDVLIGI
                     GTRLEMPYMRWSNPMGAVVNPLAPPHLIRIDIDPLEMSRLVPHAGIVADSVEGARALT
                     KAIKGYKPRPTALTDIAHSKAWANAKVQEIKPNVDYLKVIREVLPRDGFFVEEISQLG
                     FTSTFAFPVYEPMTYVTCGFQGNLGFGFQAALGVKVANPDNVVISITGDGGFMFGVQE
                     LATAAQEQIGLITIVMNNSAFGNVRRDLRRIYKRQPMVSDFKNPDFAALAEVFGIDGY
                     HAENPAEFKTALETAIEKGGPALIEVKVDRNTEKSPWKYIMMTY"
BASE COUNT          955 a         1038 c          926 g          978 t
ORIGIN      
        1 atccgctaat gagatcgaat gtgcgctgat acccatgatg gctcggaaca taagttccac
       61 aatgaagccg aatacattaa cgcatgacca aacccgctat ctcaaattaa ttcttgcaac
      121 acacggtcgg tccatacaat gggtcaggag cagccgaaat tgacacctag agattttgtc
      181 cgctttcggg ggtaaagctg ccatcatttc aatgcagttt aatggcagct aatagccaat
      241 tgcggacata aacacagctc attatattca gttgacagta tattctaatt ttcttcgtgg
      301 ttatgaatct agttaatccc gatcaccaca gatttgtgct ccgtgtaatg gttgattact
      361 tcttcgccca aatcacgtcc aatacctgac tgtttgtagc cacccatcgg cattgccggg
      421 tgagggaatg ggctgctgtt gacatagacc tgaccagccc ggattttagg tacgagttga
      481 tgaacattct gaatatcacg actccatata taagatgaca gaccataggt cgtatcattt
      541 gccagcgccg ccgcttcgtc gagatcgtca aacggtatgg cggtaatcac cggaccaaat
      601 atttcctcct ggactacgtc agaagattgc ggcggattgg ctaatacggt cggctcgacg
      661 taaaagcctg ggccatcaat tgcagaacca cccgttactg cctcgcctcc ggctttaaga
      721 cctgcattta taaagcccat caccttgtcc cgatgcgctt cagaaaccag tggaccaata
      781 ttggtttcgg gatgcaatcc tggcccaact ttcaaagatc gggcctcctt ggtaagccgc
      841 tctacggcgt catcaaagat acctgcttgg atatagagcc ttgatccggc aacacaaact
      901 tgaccggtat taccaaatat ccccaaggat atgccttgaa ctgccttttc catattggcg
      961 tcatcaagca aaattaccgg tgacttacca cccagttcca gcgtcacatt tttcaaggta
     1021 tcggttgcag tacggttaat tgctttgccg gttaccgccg agcctgtaaa gcttatcttg
     1081 ctgaccagag ggtgctcaac gagcgcttga ccggcctcgg cgccaaagcc atttatgacg
     1141 ttgatcacgc cgggtgggac gccggcatct agtgccagtt cagccaatct gagggtagcc
     1201 agaggtgtca cttccgaagg cttgatgaca atcgtacatc cggttgccaa agcgggcgca
     1261 attttccaca tggcaatcat caaagggaca ttccaaggca caatcgcgcc gacgacgccg
     1321 actggttccc gctgggtata ggcaaagtag cgtttatccg gcatcggctc accgatattc
     1381 atcgtcttgc cattgagctt ggttggccag cccgccatat agcggagcgt atccaggaca
     1441 ttgccaactt cgacgtgctg accgacgaaa cttggcatac cgacatccag tgcttcgagc
     1501 tggccgagct cttccgcgtg gccttcaatg agatccgcaa agcggtgcat catgcgctcg
     1561 cggtcagccg gcggcatatc ccgccacatc ggatcattga gcgccgtgtt agccgcttgg
     1621 acggcattgt cgatatcttc ggcagtccca gccggaattt gcgttagcac ctcggcattt
     1681 gagggatcaa tgacagagaa agaatcgcca ctgctgcccg cgatccattt gccgccaatg
     1741 aaatgtttct tttcctgatc caaaaaacgt tgggtatccg ggattaaggt ctttaaatca
     1801 tttgccatca cgttcatgtc attctcctcg cgactaatat gtcatcataa tgtatttcca
     1861 agggctcttt tcggtattgc ggtcgacttt aacttcaatc agcgccggac cccctttttc
     1921 gatcgccgtt tcaagtgcgg ttttaaactc agccggattt tccgcatgat agccatcgat
     1981 gccgaagacc tcggccaaag ctgcaaaatc aggatttttg aaatcgctca ccatcggttg
     2041 gcgcttatat atgcgccgca aatcccgccg aacattgccg aaagcagaat tgttcatgac
     2101 gattgtaatc aagccaattt gttcctgtgc agctgttgcc agttcctgaa cgccgaacat
     2161 gaaaccgcca tcgccggtga tcgagattac cacattatcg ggattggcga ccttgacacc
     2221 gagcgccgcc tgaaagccaa atcctaaatt accctgaaat ccgcaggtta cgtaggtcat
     2281 tggttcatag acgggaaaag caaatgtcga ggtaaagcca agttggctaa tctcttcaac
     2341 aaaaaaacca tcgcgcggca gcacttcacg gatgaccttt aagtaatcaa cattaggttt
     2401 aatctcttgc acttttgcgt tcgcccaagc tttggaatga gcgatatcgg taagcgccgt
     2461 tgggcgcggt ttgtagccct tgattgcttt ggtgagggct cgggcacctt caacagaatc
     2521 agcgacgatc ccggcatggg ggaccagccg cgacatttct aacggatcaa tgtcaattcg
     2581 aattaggtgt ggcggtgcta atggattgac gacggcaccc atcgggttgg accagcgcat
     2641 atagggcatt tccaagcggg tgccgatacc aatgagcacg tcggactcgc gccataaatc
     2701 atgggccgcg acagttgaga caccaagctc atggtcctca gcaacgacac cgcgcccacc
     2761 cctgaaggcg ctcacgggag cctgcagtgt ctcggccaat tcaagcaccg cgtcacttgc
     2821 gtgcaaagcg ccgctgccaa ctaaaataat gggtttctta gcatttttca ccagcttcgc
     2881 cgcggcggcg atctcggctg ctttaacttt cggcggaaca tctgtttctg cccgcggcaa
     2941 taatccgacc atttcatttt gtgccatgtc gtcccaacac atttccaccg ataccggacc
     3001 tggtcgtccc gatgtcataa cccggaaggc ctcgttgatg atttccggcg catccgctgc
     3061 acgctcaatt cggacggacc attttgtcag tgtttgcaag gtcgccgatt gatctgggag
     3121 ctcatgcaaa tggccacgta gtttgcccat cgcctcgcgg ggaatttgac cggttacgca
     3181 cagcacaggc acgttcgccc cccaagccgt gcagagcgct gccatggtat ttaaaacgcc
     3241 aggtcccggg acaacagagt agattccagg tcgcccggta gacttggcat agccaaacgc
     3301 catataggcg gcagcttgtt cgtgacgggt gccaacggtc cgaatacgcg attggacccg
     3361 agccagggct tcgaaaatag gataggtctg agcgccagga ataccgaaga cagtatcaac
     3421 gtcattggct aaaagtgact gaacaatggc ttcaccgcca ctcattagtt tttttgggag
     3481 gttttcaatc aaaattctgt tcctttggct tgaccagatt ttggtccaac tccttaagtt
     3541 tattccacgg tgatggttca gaaattcgac tacgtccaaa agctgctcag cgcttttaat
     3601 tcctggtcaa cgtcccatag tatctagtta taacttcctg gacaattgaa actaaattat
     3661 tatcttatct tgagtgcaat gcgctcaagt tcgatataaa tatgcccagt tcctctaaga
     3721 ttccggtatt tgccctaaat gcggtcaatt caatgtgaaa attgataaaa ttgcagcaaa
     3781 ccgcttcggg taatctctgc ctcataatcc gtctatagcc gtcgtgagtt catggagcac
     3841 cacaaaccga tatcggccgt taaatgattt aattctaacg tgtgaaaatg tcgtacg
//
LOCUS       DASCNL010000655         1546 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001359119, whole genome shotgun sequence.
ACCESSION   DASCNL010000655 DASCNL010000000
VERSION     DASCNL010000655.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001359119"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1412
                     /gene="dnaX"
                     /locus_tag="QF359_08755"
     CDS             <1..1412
                     /gene="dnaX"
                     /locus_tag="QF359_08755"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR02397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HJO87037.1"
                     /translation="VDDVRELIEGVRYKPVSARYKVYIIDEVHMLSRNAFNALLKTLE
                     EPPAHVKFIFATTEIRKVPVTVLSRCQRFDLRRVDIETLSANFSEIAEKEGVKVTDAA
                     ISLIARAADGSVRDGQSLLDQVVATAAKDNAELGEDVVRDMLGLADRERSFDLFELVM
                     KGNVSGALDMLDADYANGADSVLVLQDLLEVVHWLSRVKVTPDIADGPMVPESDRDRG
                     KDLTSRLSMRALTRAWQMLLKGLREAQSAPSPIQAAEMILIRLAYLADLPTPADVVKS
                     INESSGETPNVHPTGGGGNGGGQPVVNAGQQTVQTQAAPQIMPQAETQAMAEIAPEAL
                     SSPQTFEDVIALADKMNERILRSNLVSNVHLVRFEPGTIVFQPGDNMPREFSQELTRF
                     LNGTTDRRWVVTISLDEQGAASVQQREDAAQVARRDEIAQTSFMQSVMETFPGAEIAE
                     VRELGGPEEIVVEEIEGED"
     gene            1415..>1546
                     /locus_tag="QF359_08760"
     CDS             1415..>1546
                     /locus_tag="QF359_08760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HJO87038.1"
                     /translation="MKNLGQMMKQAQEMQSKMTEMQDKLAEMEVTGSSGAGMIEVTLT
                     "
BASE COUNT          399 a          355 c          432 g          360 t
ORIGIN      
        1 gtgttgatga tgtacgcgag ctcatcgaag gggtgcgcta taagccggtt tcagcgcgct
       61 acaaagttta tatcatcgat gaagttcata tgctatcccg caacgctttt aatgcgctct
      121 taaaaacgct cgaagaaccg ccagcacatg tgaagtttat ttttgccact actgagatca
      181 gaaaagtacc ggtgacggtg ttgtcccgct gtcagcgctt tgatctcagg cgcgtcgata
      241 ttgaaacact cagtgctaat ttttcggaaa tcgccgaaaa agaaggggtt aaggttactg
      301 atgcagcaat ttcacttatt gccagagcag ctgatggatc ggtcagagat ggccaaagtc
      361 tgcttgatca agtggtcgca accgctgcca aagataatgc tgagcttggc gaagatgttg
      421 tccgggatat gttgggtctc gccgaccggg aacgcagctt tgatctcttt gagttggtga
      481 tgaaaggtaa tgtttcgggt gccctcgaca tgctcgacgc tgattacgct aatggtgctg
      541 attccgttct ggtgttgcag gacttgctgg aagtcgtgca ttggctgtcc cgggttaaag
      601 tcacaccgga tattgccgac ggtccaatgg taccggaatc ggatcgggac cgtggcaaag
      661 atttaaccag ccggctttct atgagagcct taacgcgggc atggcaaatg ctgttgaaag
      721 gccttcgaga agcgcaatca gctccttcac cgatccaagc ggctgaaatg attttgatcc
      781 ggttagccta tctggctgat ctgccaaccc cagcggatgt ggtaaaatct atcaacgaaa
      841 gttccggtga aactccgaat gtacacccta ccggtggcgg tggtaatggt ggtgggcagc
      901 cagtcgtaaa cgcaggacaa caaaccgtac aaactcaggc ggcaccgcaa atcatgcctc
      961 aagcagaaac tcaagccatg gcggaaattg ccccggaagc gctctccagt ccgcaaactt
     1021 ttgaagatgt gattgccctc gccgataaaa tgaatgagcg tattttgcgc tccaatttgg
     1081 ttagcaatgt tcatctggtg cggtttgaac cgggtaccat cgtgttccag cccggcgata
     1141 atatgccgcg cgagttcagc caggaattaa cccgcttttt aaatggtact acggatcgcc
     1201 gttgggtggt gacaatttcg ctggacgagc agggcgctgc aagcgtgcaa cagcgggaag
     1261 atgctgctca agtggcacgc cgggatgaga tcgcccagac ctcctttatg cagtcggtta
     1321 tggaaacatt tccaggagcg gaaattgctg aggttagaga actcggcggg ccagaagaaa
     1381 tagtagtaga agaaattgaa ggagaagact aagtatgaaa aatctcggcc aaatgatgaa
     1441 gcaggcccaa gagatgcaat caaaaatgac cgagatgcag gataagctcg cggaaatgga
     1501 agtgaccggc tcttccggcg ccggtatgat cgaagtgacg cttacc
//
LOCUS       DASCNL010000656         1062 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001359137, whole genome shotgun sequence.
ACCESSION   DASCNL010000656 DASCNL010000000
VERSION     DASCNL010000656.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001359137"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /gene="thiL"
                     /locus_tag="QF359_08765"
     CDS             <1..1008
                     /gene="thiL"
                     /locus_tag="QF359_08765"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HJO87039.1"
                     /translation="WRNNSLSNEKARPNEFETINKYFAPLCKSEPGAFNLTDDAAIMD
                     PPAGQSLVVTTDALVADVHFFSADPAHDIAAKLLRVSLSDLASMGAVPAHYTLSIAVP
                     PEQNAAWFIAFSQGLAENQSEFEITMIGGDTVSTPGPLTLSLTAIGYIEKGKGLRRNG
                     AQAGDSVWVSGTIGDGALGLLAAENKIPNLSNDDCEYLIQRYRQPIPRTRLGPNLIDI
                     AHAVIDISDGLVADLGHICETSGVGADIQITDIPLSKAARSALAKNPDLLDMILSGGD
                     DFELLFTTKQNFAETANDLTDKSGVALTKIGEIKQSRTIRLIDRAGNEYTLHQKGYTH
                     F"
BASE COUNT          289 a          249 c          241 g          283 t
ORIGIN      
        1 tggagaaata attcgttgtc aaacgagaag gcacggccaa acgaatttga gactatcaat
       61 aaatactttg cgcccttatg caaatctgag cccggagcct ttaatcttac cgatgatgcg
      121 gcaattatgg atcctcccgc tggccaaagt ttggttgtaa ctacagatgc cctggtggct
      181 gacgttcatt ttttctctgc tgaccccgcc catgatatag ccgccaaatt attgcgcgtg
      241 agcctttcag atttggcttc aatgggtgct gtaccagccc attatacact ttcgatcgct
      301 gttccacctg aacagaatgc agcgtggttc atagcatttt cacaaggcct cgccgaaaac
      361 caaagtgagt tcgagataac gatgatcggt ggcgacacgg tttcgacccc cggtccgctg
      421 actttatcgt taactgcgat cgggtatatc gaaaaaggta agggcttgcg gcgcaatggc
      481 gctcaagctg gtgatagtgt ttgggtttcc ggaactattg gcgatggtgc acttggcctt
      541 cttgctgctg aaaataaaat acccaacctc agcaacgacg attgcgagta tttaatccaa
      601 cgttaccgtc agccaattcc acgcaccaga cttgggccga atctcatcga tatagcccat
      661 gcagtgattg atatttccga cggtctggtc gctgatctcg gtcatatttg tgaaacctcg
      721 ggtgttggcg cggacatcca aattaccgat attccgttat caaaagcagc aaggagtgca
      781 cttgcaaaaa acccggacct tcttgatatg atcctcagtg gaggtgatga ttttgaattg
      841 ctttttacca ccaaacagaa ttttgccgag actgctaatg accttaccga taaaagcggt
      901 gtcgctctca ccaagatcgg tgaaataaag caatccagaa cgattcgtct aattgatcgg
      961 gctggcaacg aatacacgct ccatcaaaaa ggatataccc acttttaata tgattgtaat
     1021 caaattaaga taagaactgg aaactaaacg tttgttataa tg
//
LOCUS       DASCNL010000657         1768 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001360366, whole genome shotgun sequence.
ACCESSION   DASCNL010000657 DASCNL010000000
VERSION     DASCNL010000657.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001360366"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(743..>1768)
                     /locus_tag="QF359_08770"
     CDS             complement(743..>1768)
                     /locus_tag="QF359_08770"
                     /inference="COORDINATES: protein motif:HMM:NF013847.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87040.1"
                     /translation="HSELESLQDAAIIEVVKKQEALGLPVVTDGEFRRLNWQLSFSSI
                     AGWDLWEKSWQMFLANPSMLMEGEKPGQRGADAVETFKVPATEKLALRENFPLKEYEF
                     LQIHSNKTAKAMLMGPDRVSQMCDIGGSKPHYGNMQTFLNEVAAIQNNMVGELIEAGC
                     QYVQLDEPSYTGYVDRATLERMALRGEDPMENLARAVTASNLVIEGYEGKACFGIHIC
                     RGNRSSMWHREGTYDGIAEYLFANLKFDRLLLEYDTERAGGFEPLRYMPKEGPLVVLG
                     LITTKTGELEDIDSLITRIEEAQKYIDIDQLAISPQCGFGHNFLSEDEQWHKLEIMQE
                     VAEKVWN"
BASE COUNT          465 a          457 c          364 g          482 t
ORIGIN      
        1 acggttccgg gaatccattg gaccgcgacg gcaatcgcct tggcctatat tgcctggcat
       61 caattcgcct atagtcgaca ggcggctcct acggctaatt aggtactctt tatgtgctgc
      121 tgtcatttgc ccagtttgag cgggaggtaa ccgccgagcg tatctgagac aagattgccg
      181 cttcaaagaa gaaaggctta tgggtgggtg ccgttcaaaa acaccgtcca cgatcaaatt
      241 caccagtgcc agtgcctctt ctacaaaacc aactcaacag tcccaaatgt tttgatgacg
      301 gacacatagc caatagggga cattaaaaca ttttccaatg atttggcatc atgtccaaca
      361 aagtctgccg tcaagcaaag cgcgtagtta acggcagagt atcatcaatt cgcatgcgct
      421 ctctcagcag taactccata agttcgatag tttccgttcc caaagccatg gcgccaatcg
      481 atcatgacac aatttctgct aacatattca gtttttgatc acctaaaaac aataaatcag
      541 ctttcaaaat tccgcccaat gggtttttac ccgcaccaat tatgagtcta taattttgca
      601 accgtcaaag gaaaattacc gttttcagcc aagccacttg ccgagtgaga ataattcaaa
      661 aggtgatgct tgatcacgcg aatgtaatgt aatgatgaga ttttgattac aatatctatt
      721 tggatttcaa ctgggtcgtt tgctaattcc aaaccttctc ggcaacttcc tgcataatct
      781 ccagtttatg ccattgttca tcttcgctca gaaaattgtg accaaatcca cattgtgggc
      841 tgatcgcaag ctggtcaata tcgatatatt tttgggcttc ctcaattcta gtgattaaac
      901 tatcgatatc ttcaagctct ccggtcttgg tggttataag gccaagcacg actagaggcc
      961 cttccttcgg catatagcgc aatggctcaa atccgcccgc gcgttcggta tcgtattcca
     1021 aaagaagcct atcaaatttg agatttgcga ataagtattc tgctatccca tcataggtcc
     1081 cttcccggtg ccacatggag gaacgatttc cgcggcagat atgaatgcca aaacaggctt
     1141 ttccttcata tccctcgatc accaaattgg aagcggtaac ggcccgggcc aaattttcca
     1201 ttggatcctc gccacgcaac gccatgcgtt ccaaggtcgc ccggtccacg tatccagtat
     1261 aactgggttc atcaagttga acatattggc agcccgcctc aattaactcg cccaccatat
     1321 tattttggat ggcagcaact tcattcaaaa acgtttgcat attgccataa tgcggtttcg
     1381 aaccaccgat atcgcacatc tgcgaaacgc gatccggtcc catcagcatg gctttggctg
     1441 ttttattcga atgaatttgc aagaattcat attctttgag gggaaaattt tcgcggagcg
     1501 ctaatttctc tgtcgccggc actttgaacg tttcaaccgc gtcggctcct cgttggccgg
     1561 gcttttcgcc ctccatcaac atactggggt tggcgagaaa catctgccag gatttttccc
     1621 ataaatccca accggcaatc gatgagaaac taagctgcca gttaagccga cgaaactcgc
     1681 catccgtcac gacaggtagt ccgagagctt cttgtttttt cacgacctca ataattgccg
     1741 cgtcctgcaa tgactccaat tccgaatg
//
LOCUS       DASCNL010000658         4000 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001363176, whole genome shotgun sequence.
ACCESSION   DASCNL010000658 DASCNL010000000
VERSION     DASCNL010000658.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4000)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4000)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4000
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001363176"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(267..1571)
                     /locus_tag="QF359_08775"
     CDS             complement(267..1571)
                     /locus_tag="QF359_08775"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO87041.1"
                     /translation="MSTQMIGVISMVGLFGLILLRVPVSIAMGTAGFLGYAAIDGWHR
                     ALITAGLVPYDLTDKYSLTVVPLFILMGSVATRSGISADLYRAANALFSGFRGALAMG
                     TVGACAGFGAICGSSLATAATMTKVAVPQMRHFGYDERLATGVVASGGILGVLIPPSV
                     VLVIYAIMAEEGVPQLFAAALLPGLASAALHIVVISTVGFFQPHRLPKSDSLGIIERL
                     SELKRLWKMVILFSIAVGGIYSGFMSPTEAAAVAAFVAILIGFITRTLSWSEFIESLV
                     ETIWTTGTLFFIIIGAFLFSYFMALTQLPNAITAWVHGLGTAPWVVILLMVAFYVVLG
                     FFLDAISMILITVPVFLPLANAVGYDGIWFGILVLVAVEVGMITPPVGLNIFVIRAQM
                     PDIALKDVYWGIVPFLSTHFVLIAILLLLPGIALWLPGVFYK"
     gene            complement(1593..2081)
                     /locus_tag="QF359_08780"
     CDS             complement(1593..2081)
                     /locus_tag="QF359_08780"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO87042.1"
                     /translation="MARPLGLAAALILVFMMLFTTYAVSMRNFFDAPVLGVVDIMELA
                     LVALIFIAMPGVFLRDENVTVDVIDQLVSRKVRVALRFFGLVLTLGFLIMMMIEMIEP
                     ALDKFNEEEVTMTLEINRFIHWIPIIFGFVVSIFATIWVIYFYARYGAPKDPKLDAEF
                     GN"
     gene            complement(2115..3161)
                     /locus_tag="QF359_08785"
     CDS             complement(2115..3161)
                     /locus_tag="QF359_08785"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO87043.1"
                     /translation="MDKSQKIIGLMSGVALLAATGFVNSVSATELKIAHFVTPKNSYS
                     KWIAGWAKELEAKSKGELKVKVFPGAQMGPPPKYYDIVRRGQADITWLVHGFTPGRFP
                     LTEISNLPYMVQSAEVGARMLNDATLRSKYLDKEHKGVKPLMLWTHQPGVLHLAKKAV
                     HRIEDMKGLRIRFASGPVKDMIKALGATPVGMPPTQMAEAMQKGTIDGAFTDYVGAGM
                     AFKLGPVTKYTTETYSYAVSFCLCMNNKSFAGLPANLKKLIDSSMIGREKEHGAAWDN
                     FDSFAKKLMMKSGMKPIKLSAAEDKRFRAVSAKVVEAKLAVLEKKGLPARAVHKMMAG
                     LAAKHSKTSKNFWK"
     gene            3480..>4000
                     /locus_tag="QF359_08790"
     CDS             3480..>4000
                     /locus_tag="QF359_08790"
                     /inference="COORDINATES: protein motif:HMM:NF019498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO87044.1"
                     /translation="MSQKDISIDGQEASKQATDADFYASMEKAGVTPLWDRYNDLIPP
                     EPTPRDPGTQWRWQDLLPLIERASSDITTEHAERRVLMLLNPIFNGEALTTTGMFGAL
                     QILLPGEMARVHRHSATAFRFVMDGRGAQTTVNGKVCPMNEGDVVLTPNWAWHEHANP
                     GSERVCWFDGLDYP"
BASE COUNT         1143 a          986 c          911 g          960 t
ORIGIN      
        1 agaacgtcat ctaaattcta gagaaacata taaggttcaa cgtgaagctg ctcttgttga
       61 gtggcagcaa ctctgtgctg cataaaattg gcttatcaat gccatactga gacgagttcg
      121 cattcgtctg acagcacccc tttccgtgtt cattgctcca gtattggagc tagagtgtag
      181 aacacggtcg gtccatccca ttagcggaca tcggccaatt gggcatagca gacttgcctt
      241 acgattctct ttagaatgaa attaacctat ttataaaaaa ctccaggtaa ccatagtgct
      301 attcctggta atagcagtaa tatcgctatc aaaacgaaat gagtcgaaag gaaaggcaca
      361 attccccagt aaacgtcttt caaggcaatg tccggcattt gcgcacgaat aacaaagatg
      421 tttagaccaa ccggaggtgt aatcatgccg acttcgacgg ctaccaaaac caagatacca
      481 aaccagatac cgtcataacc cactgcattt gccaacggca gaaataccgg cacggtaatg
      541 agaatcatgc tgatggcgtc aaggaaaaat ccaagcacga cgtaaaatgc caccatcaac
      601 aatatgacga cccaaggagc cgtgccaagc ccgtggaccc aggcggtaat ggcatttggt
      661 aactgggtaa gtgccataaa ataggaaaac aaaaaagcgc cgataataat gaaaaatagc
      721 gtacctgtgg tccaaatggt ctccaccaaa gattcaataa attcagacca actgagcgtc
      781 cgggtgataa agccgattaa aatggcaaca aaggccgcaa ccgctgctgc ttcggtgggg
      841 ctcatgaaac cagaatagat gccgccgacg gcaatgctaa atagaataac cattttccaa
      901 agccttttta gctcgcttaa tctttcaata attcccaacg aatcactttt aggcaaccga
      961 tgaggttgga aaaagccgac tgtactaatg acgacgatgt gcaatgcagc gcttgcaagc
     1021 cccggaagaa gggcagcggc aaagagttgc ggcacacctt cttcagccat aattgcgtat
     1081 ataacgagaa ctacggaggg cgggatcagg acgccgagaa tgccaccgga agcaaccact
     1141 cctgtcgcca ggcgctcatc ataaccaaaa tgccgcatct gcggcaccgc gacctttgtc
     1201 atcgttgccg ctgtcgccaa ggaagaaccg caaattgccc caaatcccgc gcaggcgcca
     1261 acggttccca tcgcgagagc gcctctaaaa ccgctgaaca atgcgttggc ggcgcgatag
     1321 aggtccgcag atatgccgga ccgcgtggcc actgacccca tcaaaataaa aagcggaacc
     1381 accgttaatg aatatttgtc agtcaagtca tagggcacta acccggccgt gatcagggcg
     1441 cggtgccagc catcaatggc cgcataaccc agaaatccag ctgttcccat ggcaatggag
     1501 actggtacgc ggagtaaaat caatccgaac agtcccacca ttgagataac accgatcatt
     1561 tgtgtactca ttcgggtcaa accttctagc ggttaattgc cgaattcagc atcaagcttg
     1621 gggtctttcg gtgctccata acgggcataa aaataaatca cccaaatggt ggcaaatatg
     1681 gacacaacaa aaccgaaaat gatcggtatc caatggatga agcgattaat ttctaaagtc
     1741 atggtgactt cttcttcatt gaacttgtcc aaggcgggct cgatcatttc gatcatcatc
     1801 ataattaaga atcccaaggt caataccaat ccaaagaatc gcagagccac acgaacttta
     1861 cgtgagacca attgatcgat gacgtctacg gttacatttt catcacggag aaaaacgccg
     1921 ggcatggcga taaagatgag ggctactagg gccagttcca taatatcgac cacaccgagc
     1981 accggcgcat caaaaaaatt ccgcatcgac actgcataag tggtgaacag catcataaaa
     2041 acgaggatta gggcggcggc gagacccaaa ggtctcgcca cgcgccttaa caaatattga
     2101 tacggtaaaa tggtttactt ccagaagttt ttagacgttt tagaatgctt tgccgccaac
     2161 ccagccatca ttttatgaac agcgcgagcc ggtagccctt tcttttcgag aacggcaagt
     2221 ttggcctcga caactttggc gctcacagcg cggaatcttt tgtcctcagc tgctgaaagt
     2281 ttaatcggtt tcatgcctga tttcatcatc agctttttgg caaaactatc aaaattatcc
     2341 cacgcggcgc cgtgttcttt ttcccgaccg atcattgaag aatcaatcaa tttttttaaa
     2401 ttggcaggca aaccggcgaa agacttattg ttcatgcaaa ggcaaaaact tactgcataa
     2461 gaataggttt cggtcgtata tttagtgacc ggcccaagct taaaggccat acccgcacca
     2521 acataatccg tgaatgcgcc atcaatcgtg cctttttgca tggcttctgc catttgggtt
     2581 ggcggcatac cgaccggggt tgcaccgagg gctttgatca tatctttcac cggacccgaa
     2641 gcgaaacgaa tgcgcaaacc tttcatatct tcgatacggt gtacggcttt ttttgccaaa
     2701 tgaagaacgc cgggctgatg ggtccacagc atcaaaggtt tgacgccttt atgttcctta
     2761 tcgagatatt tagatcgcaa tgtcgcatcg ttgagcatac gcgcacctac ttcggcactt
     2821 tgcaccatat agggcagatt ggaaatttcg gtcaggggaa agcggcctgg tgtaaagcca
     2881 tgaaccagcc atgttatatc ggcctgtcca cgtcgcacta tatcataata ttttggcggc
     2941 ggacccattt gtgcgcccgg gaatactttt actttcaact cgcctttgga tttagcttca
     3001 agttcttttg cccagccggc aatccatttg gaataactat tcttgggtgt aacaaaatga
     3061 gcaattttta gttcggtcgc tgaaacacta ttcacaaaac cggtggccgc taacaatgcg
     3121 acgccagaca tcaatccaat aattttttga gatttatcca attgtttatc ctccatgttt
     3181 aatagtgact ttatctaata gtaatttttt tatgttttat attttatcga gactagaccg
     3241 ttatcaatat tgagtcacta atttcctctt catctttatt tggcgatatc cattgagtta
     3301 agatagttca ggtaagcatt actggacgcc cactcatggc taatagcagt cattgcacag
     3361 cacaatttcg atgtctgctt tgatctcgaa agctttcaaa aaaatctatt ccactggcag
     3421 taggatatga gtactatatc caaccaaata aaaacgggac tttggcaggg gagggaaaga
     3481 tgtctcagaa ggatatatca atagacggtc aggaagcttc caaacaagca accgatgccg
     3541 atttttacgc cagtatggaa aaggctggag tgaccccact atgggatcgc tacaacgatt
     3601 tgatcccgcc ggagccgacc ccaagggacc ccggcactca gtggcggtgg caggatttgc
     3661 tacccctaat tgaacgggcc tccagcgaca ttaccaccga gcatgcagaa cgccgcgtgc
     3721 taatgctgct aaatccaata tttaacggtg aggccttgac cactaccggc atgttcggcg
     3781 ccttgcagat tttactgccg ggcgagatgg ccagggttca tcgtcattcg gccacagcct
     3841 tccggtttgt catggacggc agaggagccc aaaccacggt caacggtaaa gtttgtccaa
     3901 tgaatgaagg cgacgttgtc ctgacgccca attgggcgtg gcatgagcat gccaatccgg
     3961 gctcggaaag agtgtgctgg ttcgacgggc tcgattatcc
//
LOCUS       DASCNL010000659         1049 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001363196, whole genome shotgun sequence.
ACCESSION   DASCNL010000659 DASCNL010000000
VERSION     DASCNL010000659.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001363196"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..383
                     /locus_tag="QF359_08795"
     CDS             <1..383
                     /locus_tag="QF359_08795"
                     /inference="COORDINATES: protein motif:HMM:NF018095.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HJO87045.1"
                     /translation="DEVNLRTGPGVRYPVDWVYQRKNLPVEVIAEFGTWRKVRDVQGS
                     QGWIHQSLLSSRRMFVVTGQLRTIRKRDDSKSPPIAKLEPNVVGELKQCPDSTGWCKI
                     RVNGYEGWLRRVEFWGAYPQEMIK"
     gene            complement(406..999)
                     /locus_tag="QF359_08800"
     CDS             complement(406..999)
                     /locus_tag="QF359_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3501 family protein"
                     /protein_id="HJO87046.1"
                     /translation="MTLKTALTRKDILDLAVYEKIREQRRGEIVAAKKLRRVAVGPYA
                     TFYFESFDTMWYQVQEMLRIEKGGEVQLTDEIEAYSPLIPKGKELVATVMFEIDDPDI
                     RTAFLAGLGGVEDCMMIKINGEQVVAKPEQDVDRTNAAGKASSVQFVHFKFSADQISK
                     FKENNAHVTVGINHPKYGHMTVLSEERRAALAEDFKS"
BASE COUNT          257 a          256 c          260 g          276 t
ORIGIN      
        1 ccgatgaagt caatctccgg accggacccg gcgtccgcta tccggtcgat tgggtttatc
       61 agcgaaaaaa tttgccggtc gaagtgattg ctgagtttgg cacctggcga aaggttaggg
      121 atgtccaggg ctcgcagggc tggatccacc aaagtttgct gagctcccgg cgcatgtttg
      181 tagtgaccgg ccagcttcga accatccgca aacgcgatga tagtaaatca ccgccgattg
      241 ccaagctgga accgaatgtt gtcggcgaat tgaaacaatg cccggatagt accggctggt
      301 gcaaaattag ggttaacggg tatgagggct ggctccgccg ggttgaattt tggggagcct
      361 atccccaaga aatgattaag tgaaatgatt aaacaagctt tccccttaac ttttaaaatc
      421 ttcggccaac gccgcccggc gctcttccga tagtaccgtc atgtgtccat atttgggatg
      481 attgatgcca accgttacat gagcgttatt ttctttgaat ttggagatct gatcggcgga
      541 aaacttaaaa tggacaaatt gaacggatga agctttaccg gctgcattgg tccggtcaac
      601 atcttgttcc ggtttggcaa caacctgctc accattaatt ttaatcatca tgcagtcttc
      661 gacgccaccg aggccggcca gaaaagcggt tcgaatatca ggatcatcga tctcaaacat
      721 cacggttgca accagctctt tgcccttcgg aatcaaagga ctataggctt caatctcgtc
      781 agtaagttgg acttcgccgc ctttttctat gcgcagcatt tcctgaactt gataccacat
      841 ggtatcgaag gattcgaaat agaaggtggc atagggcccg accgccaccc tcctcagttt
      901 ctttgctgca acgatctcgc cacggcgctg ctcgcggatt ttttcataaa ctgctaaatc
      961 tagaatatcc ttacgggtaa gtgctgtttt aagggtcatt atgagaattt tctccggtta
     1021 acccataagc gtgggctagt atttggacc
//
LOCUS       DASCNL010000660         4861 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001364777, whole genome shotgun sequence.
ACCESSION   DASCNL010000660 DASCNL010000000
VERSION     DASCNL010000660.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4861)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4861)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4861
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001364777"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="QF359_08805"
     CDS             complement(<1..186)
                     /locus_tag="QF359_08805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87047.1"
                     /translation="MKSPTALPSLVSILKVIALGSVGILALTVSKVSGDKNPCMAALK
                     QATTGKQPASHKAPAEPK"
     gene            complement(183..359)
                     /locus_tag="QF359_08810"
     CDS             complement(183..359)
                     /locus_tag="QF359_08810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87048.1"
                     /translation="MSDSLRPVARDRRHQKSHASFQQWRAGRRTKKINMKIKPQPKDA
                     SLISLAVPIYNATR"
     gene            complement(352..1362)
                     /locus_tag="QF359_08815"
     CDS             complement(352..1362)
                     /locus_tag="QF359_08815"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HJO87049.1"
                     /translation="MVTLKTLQVDGEDDGIRLDRWFKRHFPDIGHGRLEKLLRKGQVR
                     IDGKRAKSNTRIEEGQEIRVPPISADPRPRPKKVVKDNVTDRDVELLRQAVIHKDDHI
                     IAINKPAGLAVQGGSGTSKHVDAMLNGLQFEMKERPKLIHRLDKDTSGVLLLARTVKS
                     AAMLSKTFKTKDVHKIYWAAVVGMPKIKYGKINLALEKRPGKHGEQVVADEGGKRAVT
                     YYRTIDNAAGKASWLAMMPETGRTHQLRVHCKELRTPILGDGKYGGRDAFLEGADGVS
                     QQLHLHAKAIKFPHPAGGYFQVVSELSDHMRKTWKYLGFDEKLILDPFEDFYEEWYAG
                     HE"
     gene            complement(1375..1755)
                     /gene="crcB"
                     /locus_tag="QF359_08820"
     CDS             complement(1375..1755)
                     /gene="crcB"
                     /locus_tag="QF359_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HJO87050.1"
                     /translation="MNMILSIAAGGAIGAVGRYLAMAGIGHWFGHGFPYGTLSVNVIG
                     SLILGFLIEISTLTWSPSPEIRAFFVVGVLGAFTTFSAFSQDVAGLIERGEFLLAASY
                     VIASVVLSIAALFLGMIIFRQILV"
     gene            complement(1752..3062)
                     /locus_tag="QF359_08825"
     CDS             complement(1752..3062)
                     /locus_tag="QF359_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019646017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HJO87051.1"
                     /translation="MTTLFEPQAPRPLADCLRPLTLDEVVGQAHLLAEDAPLGRMLAS
                     GRMVSLLLWGPPGTGKTTIARLLAEHTNLHFEPLSAVFSGVADLRKVFEASKNRREAG
                     RGTLLFVDEIHRFNRAQQDGFLPYVEDGTVTLLGATTENPSFELNAALLSRLQVFVLN
                     RLDDAALEELLVRSEELYKKPLPLDKDARAALRAMADGDGRYLLNMTEEISLLPPELI
                     LDTAALTEIVQKRMPLYDKAQEAHYNLISALHKSLRGSDVDASLYWLARMLVGGEDPR
                     YIARRLVRFASEDVGMADPNALPHSIAAWEAYERIGSPESELAIAQCVIYLATAPKSN
                     AVYNAMKSAMRTAKETGSLSPPKHILNAPTGLMKGLGYGKGYEYDPDAEDGFSGQDYF
                     PEEMIRANLYRPRGKGFEKEIVKRLDYWRKLRQDKKRDDGRGEA"
     gene            complement(3059..4393)
                     /locus_tag="QF359_08830"
     CDS             complement(3059..4393)
                     /locus_tag="QF359_08830"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HJO87052.1"
                     /translation="MPQSQAEIKLSFAPLVRKAAPAVVNIFTRKTVTQRSFSPLFDDP
                     FFRRFFGEQFRNGPRSRQKVQNSLGSGVIVEAKGTIITNHHVIKGADEITVVLADRRE
                     FDAKIIGSDKKTDLAVLKISAGREKLPFLAFRDSDDLEVGDLVLAIGNPFGVGQTVTS
                     GIVSALARTQVGINDLNFFIQTDAAINPGNSGGALITLDGKLVGINSAIYSKGGGSVG
                     IGFAIPTNMVRAVLSGLSGSGSVVRPWIGAEGQGVTADIAASIGMKRPAGILISGVYP
                     KGPADRAGIKVGDVITGVGKHDVNDTESLRFRIVTRPIGEILNIRLIRRGKTMRVNFP
                     VEAPPQRPKINKTELSGYNPLQGAIIGNLSPALADQIGMNLLSRGVVILEIKHGSSSQ
                     HFGFQPRDIIKEINGGDVRTVAQVQRLLLQKSKLWKLSINRNGKILSMATNR"
     gene            complement(4560..>4861)
                     /gene="rplQ"
                     /locus_tag="QF359_08835"
     CDS             complement(4560..>4861)
                     /gene="rplQ"
                     /locus_tag="QF359_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HJO87053.1"
                     /translation="FVDKMITLGKRGDLHARRQAMSFLRDKEVVSKLFDSLADRYKDR
                     QGGYSRVLAAGYRYGDSAPMAIIELVDRDEDAKGTADKARVEAESEAEDQRAVST"
BASE COUNT         1232 a         1343 c         1112 g         1174 t
ORIGIN      
        1 tttcggttct gctggcgctt tatgagaagc cggctgcttg ccggtagttg cttgttttaa
       61 tgccgccata cagggattct tgtcaccact caccttactc actgttaacg ccaaaattcc
      121 aaccgaaccc aaggcaatca cttttagaat agataccaga ctgggcaatg ctgtcggtga
      181 tttcaacgtg tcgcattata gatcggcacc gccaggctga taagactagc gtctttcggc
      241 tgtggtttga ttttcatatt gatcttcttg gtgcgccgcc cagcgcgcca ttgttgaaat
      301 gatgcatgcg acttttgatg cctacgatct cgagcgaccg gacgtaggga atcactcatg
      361 accggcgtac cattcctcat agaaatcttc gaacggatcg aggatcaatt tctcgtcaaa
      421 acccaaatac ttccatgtct tacgcatgtg atcggacaat tcagaaacca cctgaaaata
      481 gccgccagcg ggatgcggaa atttaattgc tttggcatgg agatgaagct gctgggaaac
      541 tccatctgca ccttctaaga aagcgtcgcg gccgccatat ttaccgtcac ctaaaatcgg
      601 cgttctgagc tctttgcaat ggacacggag ttggtgagtg cggccagtct ccggcatcat
      661 tgccagccag ctcgccttgc cggctgcgtt atcaatagtg cgataatagg taaccgcgcg
      721 cttgccaccc tcgtcagcga caacttgctc accgtgttta ccaggccgtt tttcaagcgc
      781 cagattaatc ttgccatatt taattttcgg catcccgact acagctgccc agtaaatttt
      841 gtgaacatct ttggttttaa aggtcttgct taacatggcc gcggatttta ccgtccgcgc
      901 cagcaataat actccagaag tatccttatc cagccggtgg atcaacttgg gtcgctcttt
      961 catttcgaac tggagaccat tgagcatggc atcgacatgt ttactggtgc ccgacccacc
     1021 ttgcaccgcc aaacctgctg gtttattgat ggcgataata tgatcatctt tgtggataac
     1081 ggcttggcgc agcaattcaa catcacggtc ggtcacatta tcttttacaa ccttctttgg
     1141 ccgaggacgc ggatcagctg atatgggcgg cacccgaatt tcttggcctt cttcaatccg
     1201 ggtattagac ttagcgcgtt taccgtcaat cctgacctgc cctttacgca gcagtttttc
     1261 caagcggcca tgaccgatat caggaaaatg ccgtttgaac caacgatcca aacgaatgcc
     1321 gtcatcttcg ccatctacct gaagggtttt tagcgtaacc attatttatg cccgttaaac
     1381 cagtatctgg cggaaaatta tcattcctaa aaataaagcc gcaattgaca acacaactga
     1441 tgcaataacg taggatgctg cgagtagaaa ctcacctctc tcaatcaagc cagcaacatc
     1501 ctgagaaaag gccgaaaacg tggtaaaggc gccaagcacg ccaacaacaa agaaggctct
     1561 aatttctgga ctcggcgacc aggttaacgt tgatatttcg atcaagaaac ccagtatcaa
     1621 tgaaccgatc acatttactg acagggtgcc atagggaaaa ccatgtccaa accaatggcc
     1681 aataccggcc atggcgagat agcgcccaac tgcaccaatc gcaccaccgg cagctatcga
     1741 taggatcata ttcatgcttc accccgacca tcatcgcgtt tcttatcttg gcgtagtttt
     1801 cgccagtaat cgagccgttt cacaatttcc ttttcaaatc ccttgcctcg agggcgatat
     1861 aaattggcgc ggatcatttc ttctgggaaa taatcctggc cagaaaaacc atcttcggcg
     1921 tcaggatcat attcataacc tttgccgtag cccaaaccct tcatcagccc tgtcggcgca
     1981 ttgaggatat gtttcggtgg cgacagcgag ccagtttcct tggccgtccg catcgctgac
     2041 ttcattgcgt tataaaccgc attagactta ggtgcggttg ccaaataaat cacgcattga
     2101 gcaatcgcca attcgctctc gggtgatccg atacgttcat aggcttccca cgccgcaatt
     2161 gaatgcggca gcgcattggg gtcggccatg ccgacatctt cggaggcaaa gcgaaccaga
     2221 cgtctggcga tatagcgtgg gtcttctcct cccaccaaca tccgcgccag ccaatagagc
     2281 gatgcatcaa catcggagcc ccgcaagctt ttatgcagcg cagatataag attgtaatgt
     2341 gcctcctgcg ctttgtcata aagcggcatg cgtttctgca caatctccgt gagcgcagca
     2401 gtatcgagta tcagctcagg cggcagcaag gaaatctctt ccgtcatatt taataaatac
     2461 cgcccatcac catccgccat ggcacgcaat gccgcccggg catccttatc aagaggcaat
     2521 ggctttttgt agagttcttc cgaacgcacc agcaactctt caagtgcggc atcatccaag
     2581 cgattgagca caaacacctg caagcgggac aacagggcgg cgttaagctc aaaggaggga
     2641 ttttcagtcg tcgcgcctag cagcgtcacg gtgccatctt cgacgtaggg taagaaaccg
     2701 tcctgttgcg cccgattgaa gcggtgaatt tcatcaacaa acagtaaggt tcctcgcccg
     2761 gcttcgcggc gattcttcga cgcttcaaaa actttgcgca aatctgcgac gcctgaaaac
     2821 accgccgata aaggctcgaa atgaagatta gtgtgttcag ccagcaaacg cgcgatggtc
     2881 gttttgccgg ttcccggcgg cccccacagt agcagcgaga ccatccggcc acttgccaac
     2941 atgcgcccaa gcggtgcatc ttctgccaac aaatgcgcct gccccacaac ctcatccaat
     3001 gtcaaaggtc gtaagcaatc cgccaggggc ctcggggcct gaggttcaaa aagtgtcgtc
     3061 accggttagt cgccattgac agaattttgc cgttccgatt gatggacaat ttccatagct
     3121 tacttttttg cagcagtagg cgttggacct gagcgaccgt cctgacatcc ccgccattga
     3181 tctctttaat tatatcccgg ggctgaaaac caaaatgttg cgaggaagac ccgtgcttaa
     3241 tttccaaaat caccacaccg cgtgacagta agttcatgcc aatctgatcc gctagcgccg
     3301 gtgagagatt gccaataatg gcgccctgca acggattata accactgagc tcggttttat
     3361 ttatctttgg tctttgcggt ggtgcttcga ccggaaaatt tacccgcatc gtcttaccgc
     3421 gccggatcag tctgatattc agaatttcac caatcggccg cgtcacaatg cgaaaacgca
     3481 aactctccgt atcatttaca tcgtgtttac caacaccggt gatgacgtca cccaccttaa
     3541 taccagcgcg atccgccggc cctttcgggt aaacgccact aataagaata ccggccggcc
     3601 gtttcatgcc aatagaggcg gcgatatcag ccgtaacccc ctgcccttcg gcaccgatcc
     3661 agggacgaac cacacttcca ctaccagaaa gtccggagag caccgctcga accatgttgg
     3721 tcggaatggc gaagccaata cccaccgagc caccgccctt ggaatagatc gccgaattaa
     3781 taccgaccag cttgccatca agggtgatta gagctccgcc ggaattgccg ggattgatcg
     3841 ctgcatcggt ttgaataaaa aagtttagat cattgatacc gacttgggtt cgtgccaaag
     3901 cagagacaat cccactggtt acggtctggc caacgccaaa gggatttccg atcgctaaca
     3961 caagatcacc cacttccaaa tcatcagaat cccggaaggc caaaaatggc agcttctcac
     4021 gaccagcgct tattttcagg accgccaagt cggtcttttt gtcgctgcca attatttttg
     4081 catcgaactc ccggcgatca gccagcacga cagtgatctc atcggcgcct ttgatcacgt
     4141 ggtgattggt gatgatggtg cctttggctt cgacaatcac tccggagccg agcgagttct
     4201 gaactttctg acgcgacctc gggccgttac gaaactgctc accaaaaaag cgccggaaaa
     4261 acggatcatc aaaaagtggt gagaaagatc gttgggttac ggtcttgcgc gtaaatatat
     4321 taaccaccgc tggagcggcc ttgcgcacca gcggtgcaaa ggaaagttta atctcggcct
     4381 gagattgagg cacctgcttt tgcgcctgcg cggtatttat taagatcaat aatcccaaga
     4441 aaattccaga taagacaata cgaattttca tatttctatt atacctctca aaacaaaaga
     4501 ggcagccacc agttagatcc aagtgccgcc tcttttaaaa ttgtatacta gaagccagat
     4561 tatgtggaaa cagctctctg atcttccgcc tcagactcgg cttcaacgcg agctttatct
     4621 gcagtaccct tagcgtcttc atcgcggtca accaattcga taatggccat cggcgctgaa
     4681 tcaccgtagc ggtaaccagc agccagcaca cggctataac caccttggcg gtctttatag
     4741 cgatcagcca gggaatcaaa caattttgaa accacttcct tgtcacgcag gaacgacatc
     4801 gcttgacgtc gggcatgcag atcaccacgt ttgccgagcg taatcatctt atcgacaaag
     4861 g
//
LOCUS       DASCNL010000661         2804 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001369696, whole genome shotgun sequence.
ACCESSION   DASCNL010000661 DASCNL010000000
VERSION     DASCNL010000661.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2804)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001369696"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(125..1330)
                     /locus_tag="QF359_08840"
     CDS             complement(125..1330)
                     /locus_tag="QF359_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO87054.1"
                     /translation="MYNTNLDKLTDYPFDRLRALLNSVEAPANKEPMIMSLGEPQHAS
                     PALLTETINKFADQWAKYPPIAGTPDLLDAIRDWLNRRYNLPAGLIEASQNICAVSGT
                     REALYMAGDIAISPQKNGARPVVLIPNPFYQVYIGAALMNRAEPIYMSATPENGFLPD
                     FAALDEATLQRTSLAFLCSPSNPQGAVADLDYLKTAITQARKYDFVLAVDECYAEIYD
                     QSPPPGGLEACQDLGGGQKNNMANVLVFHSLSKRSNAPGLRSGFVAGDPELIKKFKTL
                     RNYGGATLPIPILAASAALWHDDDHVQENQKLYRQKFDQADQILGEQFSYYRPEGGFY
                     LWLDAIDGETAARRLWMEAGVRVMPGGYLARPDASGFNPGTPYIRIALVQKLEFISEA
                     LGRIVETLK"
     gene            complement(1441..1779)
                     /locus_tag="QF359_08845"
     CDS             complement(1441..1779)
                     /locus_tag="QF359_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HJO87055.1"
                     /translation="MKYIVAIIKPSKLDTVREALMEIGVQGLTTSEVSGFGRQKGHTE
                     IYRGAEYAISFVPKTKIEIAVSDDMADRVLETIRNEAGSENIGDGKIFVYELTDAIRI
                     RTGERGDEAL"
     gene            complement(1804..>2804)
                     /locus_tag="QF359_08850"
     CDS             complement(1804..>2804)
                     /locus_tag="QF359_08850"
                     /inference="COORDINATES: protein motif:HMM:NF013104.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HJO87056.1"
                     /translation="GVSTDTLLGSIPEDVFFMFQMTFAIITPALIVGAYVERIKFGAV
                     ILFSALWLIFVYAPSTHWIWGSGLLADLGWASDALKGYATMDFAGGLVVHANAAVAAL
                     VIAKVLGARRGFPDELRPPHNPGLVMIGAAMLWVGWYGFNAGSALAANGSAGMAMTVT
                     HISASAACLTWILIEYIKFGKPSLVGIATGAIAGLATITPGSGFVGPGGALVYGVGSG
                     VLCFYMINVVKSKWNIDDSLDVFAVHGIGGTLGILLTAFFADASLGGNGLPEGITMGT
                     AFLGQLIAAVVTIVWAGVASFILLKITQAVLGLRVTVDDETEGLDITSHGERSYDL"
BASE COUNT          731 a          724 c          705 g          644 t
ORIGIN      
        1 aataccgtta agcaagaagc ggttcgagtt tgtctcggct cacccaattc gagagaaaaa
       61 gtagaagctg gtcttaatat tttgatgcga gtgttaagcg aaacgcgaaa gtcgccgaca
      121 ctgattattt aagcgtctcg acaatccggc ccaaagcttc cgaaataaat tcaagtttct
      181 gaactaaggc aattcgaata tacggcgtgc cgggattgaa gccggatgcg tccggcctcg
      241 caagatagcc accgggcatc actctaacgc cagcttccat ccagagccga cgggcggcgg
      301 tttcgccatc aatggcatcg agccacaaat aaaatccgcc ttcaggtcgg taatagctaa
      361 attgttcgcc gagaatttga tcggcctggt caaatttttg gcggtatagt ttttgatttt
      421 cctgaacgtg atcatcgtcg tgccagaggg ccgccgacgc cgccaaaatt ggaattggta
      481 aagtggcacc gccataattg cgcagggttt taaatttttt tatcaactcc ggatcaccgg
      541 caacaaagcc cgagcggaga cctggcgcat tggagcgttt ggataaggaa tgaaaaacta
      601 atacgttagc catattattt ttttggccac cacctaaatc ctgacaggct tcaagcccac
      661 ccggtggggg cgattgatca taaatttctg cgtagcattc atcgacggct aagacgaaat
      721 catatttacg cgcttgggtg atggccgttt tgagataatc aagatcagca acggcacctt
      781 gcggattgga cggtgagcag aggaaagcca gggatgtgcg ctgcaaggtc gcttcatcaa
      841 gtgccgcgaa atccggcagg aaaccgttct cgggtgtggc cgacatataa ataggttctg
      901 cccggttcat caacgcggcg ccgatataaa cttggtaaaa tgggtttggg atcagcacca
      961 caggtcgggc accgttcttt tgcggtgaga tggcaatatc acccgccata tatagtgctt
     1021 ccctggtgcc ggaaacagca cagatgttct ggctagcctc gatcaatccg gctggcaaat
     1081 tgtagcgcct gtttaaccag tctcggatgg cgtccagcaa atcaggcgtg ccggcaatcg
     1141 gcggatattt tgcccattgg tcagcaaatt tattgatcgt ttccgtcagc aatgccggtg
     1201 atgcatgttg cggctcacct aatgacataa tcatcggctc tttgttggct ggcgcctcga
     1261 cgctatttaa cagcgcccgc aagcgatcaa atggataatc cgtcagtttg tcgagattgg
     1321 tattgtacat cgttaaaacc accacctaaa ataagccccg catatagcgg ggctttaaag
     1381 ttcagatagt tttagctcgc atcacccgct ctcacaagca ggtgaaagag aaataactta
     1441 ttagagtgct tcgtcgccgc gctcgccggt tcggatccgg atcgcatcgg tcagttcata
     1501 aacaaagatt ttgccgtcac cgatattttc cgatccagct tcgttgcgaa tggtttcgag
     1561 aacccggtcg gccatatcgt ccgagacggc gatttcgatt ttggttttgg gtacaaagct
     1621 aatggcatat tcggcaccgc gatatatctc ggtatgacct ttttgacggc caaatcctga
     1681 tacttcgctt gtggtcaaac cctggacacc gatctccata agcgcttctc gtaccgtatc
     1741 caatttagac ggtttgatga ttgctactat atatttcatg agcgtcgctc ctttttatcg
     1801 atcttacagg tcgtaactac gttcgccatg cgacgtaata tcaaggcctt cggtttcgtc
     1861 atcaacagtc acccgcaagc caagtacggc ttgggttatt ttaagaagaa tgaaactggc
     1921 aacaccagcc caaactatcg tgacaacggc tgcaatcaat tggccgagga aagcggttcc
     1981 catggtgatg ccttccggta acccgttgcc gccaagactg gcatcggcga agaacgcggt
     2041 cagtaaaata cccaaagtac cgccaatacc gtgaacggcg aagacatcaa gcgagtcatc
     2101 gatgttccat ttcgacttta cgacattgat catatagaag cagaggactc ccgaaccgac
     2161 accatatacc agggcgccac ccgggccgac aaagccggag ccgggtgtga tcgtcgccaa
     2221 accagcaatc gccccggtgg caataccaac caggctgggt ttgccgaatt tgatgtattc
     2281 gatcaaaatc caggtgaggc aggcagctga cgccgaaata tgtgtcactg tcattgccat
     2341 cccggcgctg ccattggcag ccagggcaga gccagcatta aagccgtacc agccaaccca
     2401 caacattgct gcaccgatca tcaccaggcc cggattatgt ggcgggcgta attcatcggg
     2461 aaaaccccgg cgggcaccca ggactttagc gatgactaaa gctgctaccg cggcattggc
     2521 gtggaccact aggccgccgg cgaaatccat cgttgcatag cctttgaggg cgtcactggc
     2581 ccaaccaaga tcagccagaa gaccactacc ccaaatccaa tgggtggagg gggcatagac
     2641 aaagatcagc cacagagcgc tgaacaagat aaccgcacca aatttaatgc gctcaacata
     2701 ggcgccgaca atcagagccg gagtgataat ggcaaaagtc atttggaaca tgaaaaagac
     2761 atcttccggg atgctgccca aaagcgtatc ggttgatacc ccag
//
LOCUS       DASCNL010000662         1225 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001372448, whole genome shotgun sequence.
ACCESSION   DASCNL010000662 DASCNL010000000
VERSION     DASCNL010000662.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001372448"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(69..>1225)
                     /locus_tag="QF359_08855"
     CDS             complement(69..>1225)
                     /locus_tag="QF359_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019646144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HJO87057.1"
                     /translation="TALPQLVAAFHSLVGLAAVVVAAAAFFSPEAYGIGVLGNIQAAS
                     LIEMSLGTAIGAITFSGSLIAFGKLQGMLSGAPLVFKGQHALNAILGIALVATVVWLV
                     QTNDPNAFWVVVALSIILGFLIIVPIGGADMPVVVSMLNSYSGWAACGIGFTLGNTAL
                     IVTGALVGSSGAILSYIMCKGMNRSIFNVLLGGFGGEVAGPTAGAGGGDKSVKSGSGD
                     DAAFIMKNASKIIIVPGYGMAVAQAQHALREMCDLLKEEGVDVSYAIHPVAGRMPGHM
                     NVLLAEANVPYDEVFELEEINTEFSTADVAFVIGANDVTNPAAKTDPTSAIYGMPILE
                     VENAQTVLFIKRSMASGYAGVDNELFFRDNTMMLFDDAKAMTESIVQALG"
BASE COUNT          338 a          345 c          291 g          251 t
ORIGIN      
        1 caatcgataa aaataataaa aaacggcccc caatctgagg accgtttttt gataaatatt
       61 tagctgctct agccgagtgc ttggacgata ctttcggtca tcgccttagc atcatcaaac
      121 agcatcatgg tattgtccct aaagaacagc tcattatcta cgccagcgta accagaggcc
      181 attgagcgtt tgataaagag cacggtttga gcattttcga cctcaaggat cggcatgccg
      241 taaatcgcac tcgttggatc ggttttcgct gccggattgg tgacatcatt ggcgcctatg
      301 acaaaagcca catccgctgt cgagaactcg gtattaatct cttccagctc aaatacttcg
      361 tcatagggca cattggcttc agccagcaac acgttcatat gacccggcat ccggccagcg
      421 acgggatgga tcgcatacga aacatccacg ccctcttctt tcaacagatc acacatctct
      481 cgtagtgcat gctgcgcttg cgccaccgcc atgccgtaac ccggcacgat gataattttg
      541 ctggcgtttt tcatgatgaa agctgcatca tcgccgcttc ctgatttaac cgacttgtcg
      601 ccaccaccgg caccagcagt aggaccggca acttcgccac caaagccacc gagcagaaca
      661 ttaaaaatcg agcggttcat gcctttacac atgatatagc tgaggatcgc gccagaggaa
      721 ccaacaaggg cgccggtgac gatcaaagct gtattaccga gggtaaaacc gatgccgcac
      781 gccgcccaac ccgaatacga gttcagcatt gagacgacca ccggcatatc agcgccgcca
      841 attggcacaa taatcaggaa gcccagtatg atcgataaag cgacgaccac ccagaaagca
      901 ttggggtcgt tggtttggac gagccacacc accgttgcca ctaaggcaat cccgaggata
      961 gcgttaagcg catgctgtcc cttgaacacc aaaggtgcgc cactgagcat tccctgtagc
     1021 ttaccaaatg cgattaaaga accggagaac gtgatggcgc caatcgcggt gccaagtgac
     1081 atttcgatca ggctcgcagc ttgaatatta ccaaggacgc caatgccata ggcttccgga
     1141 gaaaagaacg cggcggcggc aacaaccacg gcggccaagc caacaagtga gtgaaaggcc
     1201 gcaaccaatt gcggtaaagc cgtca
//
LOCUS       DASCNL010000663         1126 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001374205, whole genome shotgun sequence.
ACCESSION   DASCNL010000663 DASCNL010000000
VERSION     DASCNL010000663.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001374205"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="QF359_08860"
     CDS             complement(<1..193)
                     /locus_tag="QF359_08860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87058.1"
                     /translation="MSTKPQDSSDQTENSTIAVESPTPLASKKYFKRDVIANVVVVAL
                     ILLTMEVWSKFTPEYIMPSV"
     gene            complement(287..>1126)
                     /locus_tag="QF359_08865"
     CDS             complement(287..>1126)
                     /locus_tag="QF359_08865"
                     /inference="COORDINATES: protein motif:HMM:NF020650.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87059.1"
                     /translation="NDLLIDKNFGGKHGVGFDVFNIYGSVRQYYTDIMTGNFDIGVGA
                     WDSFAKFAAKGAPIKIAAIITTGSLAGYITGPNGPNSLAELKGKTLGSMTVTGTYNMG
                     RTWAKVFDGIDFNKDLTVQNVPNPPAVLGLVAANRADAGLIWEHTLSSGLAKIPGSKV
                     FLNLNDHYKKHTNRDMPYFAVGVNTKRMARHPKGSLAKAMASYGDMFQWITNNKAGFT
                     QQASRVKLKPEILESAVNSGRMKFKVRSMTDAKNREDVLHAAKIMNKAGTLPKVSESF
                     FAV"
BASE COUNT          272 a          284 c          273 g          297 t
ORIGIN      
        1 ctaccgacgg cataatgtat tcaggtgtga atttgctcca cacctccatg gtcaatagga
       61 tgagagctac caccacaacg ttagcaatta cgtcacgttt gaaatatttc ttactggcga
      121 gcggcgtcgg tgattctaca gcaatcgttg aattttcagt ttgatccgat gaatcctgcg
      181 gcttcgtact catttagcgt ctccaggtgg tctatatcta accattacgg caagaggaac
      241 cgtgcggcgg tttgatctac cgccgccgcc gcacaattcc cacttactaa acggcgaaga
      301 agctttcgct gaccttcggc aaggtgccgg ccttattcat gatttttgcc gcatgcagaa
      361 cgtcttcacg gttcttggca tcagtcatag atctgacttt aaatttcata cggcctgaat
      421 ttacggcaga ttccagaatt tccggcttaa gtttcacgcg gctagcctgt tgtgtgaacc
      481 cagccttatt gtttgtaatc cattggaaca tgtcgccata cgacgccatg gccttggcga
      541 gcgatccctt ggggtgacgc gccatgcgct tggtgttaac gccaacagca aaatacggca
      601 tatcccggtt agtatgtttt ttatagtgat cattaaggtt gagaaacacc ttagaccctg
      661 gaatcttggc gaggccggaa ctgagggtgt gttcccagat caatccggca tctgcacgat
      721 tggcagcgac caaacctaaa acagcgggcg gattgggtac attctggacg gtgagatctt
      781 tgttgaaatc aatgccgtca aagactttcg cccaagtgcg gcccatatta taggtgccgg
      841 tcacggtcat cgaccccagc gtcttgccct tgagttcagc aagcgaattc gggccgttcg
      901 gtccagtgat ataaccggcc agactacctg tcgtgatgat agcggcaatt tttataggtg
      961 cgcccttggc ggcaaacttg gcgaatgaat cccaggcgcc gacgccaata tcgaagttgc
     1021 cggtcatgat atcggtgtaa tattggcgga ccgatccgta aatattaaac acatcaaaac
     1081 ccacaccatg tttgccaccg aaatttttat cgatcagaag atcatt
//
LOCUS       DASCNL010000664         3855 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001374678, whole genome shotgun sequence.
ACCESSION   DASCNL010000664 DASCNL010000000
VERSION     DASCNL010000664.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3855)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3855)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001374678"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            94..1311
                     /locus_tag="QF359_08870"
     CDS             94..1311
                     /locus_tag="QF359_08870"
                     /inference="COORDINATES: protein motif:HMM:NF037995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO87060.1"
                     /translation="MERIILIGALIAGFALVQPSLAAGKGKELSDRAKAMDANKDGLV
                     QAGEAQGMLKSNFKDMDCDKNGGLDGAEISGFFSGGCPEPAIAKKSVTQQVLKFASPS
                     PARAPINWRFLRPWTKKVTADSDGALKVELKTGRKLATALNVYDRVVANVAQIGWAGL
                     LLSGKFQRSLVTGLPFLLNNSEEGSLALWRLYAKGIIKSEYGEVKPLALTTFPMLGFH
                     TRKKPIKSLADVKGLRIRMTSRLSAQLLKVLGAAPISIPFFDQYQALNRGIIDGTLAQ
                     WTIFYPFKLDEVTKHHLEGLRMGGFPGMVFITHKIYDGLTAASRRAIDANSGEKFSRD
                     FGKFWDGAQTQGRDYVAKKSGHTITKISPEDEAKWRERMKPITTQWIKSLSDGQKILD
                     ALKAELASIRSGN"
     gene            1345..3267
                     /locus_tag="QF359_08875"
     CDS             1345..3267
                     /locus_tag="QF359_08875"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO87061.1"
                     /translation="MNERVERANAICISFTRRIAFGGVLAMLIVAGVTIVDIFFRVVF
                     NSPISAMNEIVAMVFAIAIAACFPAGIAQRVHLRVNILSNYFGEKLSSWLTAIGSLLL
                     FWMFALFTWRIGVYATEMYLRDATTMILNIPRSPFLWAVTFLCGISAIVQYVVFAGDV
                     FTARSKSPGIYRGITTLCLLGGLLITLVAILIFDGAVAALSTPAKASPVMTALVIFGL
                     VWVLLFLLIPIGAVMVLLGFIGMSLLLDPSPALSVVGSEVAEFLTNGQLVVLPLFLMM
                     GVLASAAGLSEDIYRLAQALLGNLRGGLALATIGGCAGFGAVTGSSVATATTIGRVAL
                     PEMSQRGYEVGFSAGCVAAGGTLGALVPPSSALILYAFLTEESIGQLFVAALVPAALG
                     VLLYMLTISAYVRLVPNAAPAPGKIDTTELMSELRRGLTVIVLFAVVMGGIYIGLFTA
                     TEAASVGVIGAFLVALFRGKLRGGAFWNVMGETASITAMIYVLILGGITISFFLGITE
                     LPEFLTKKVAQMDLAPLGIITLLLVVYILLGAVMESFSIMVITVPVIAGLIVDLGFDL
                     TWWGVIMLVVVEIGLITPPFGINVFVLKAVAGADLPLTAVFRGVMPFVGADIVKLILL
                     VLLPSLVLWLPSTMFN"
     gene            3284..>3855
                     /locus_tag="QF359_08880"
     CDS             3284..>3855
                     /locus_tag="QF359_08880"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJO87062.1"
                     /translation="MSLTPEQVQEYTDKGFIVVGSFFKPEEMARISTWLDELRDKEPA
                     PGEEAKYYEASPISGENILVRIENVIGDYNRDISDLLISDQAREALSQLIGEAPVLFK
                     EKINYKLPGCRADKLHQDQAAGWNTYCDFFITMGIAVDENRLDNGALSFMISGNYDKQ
                     LMTEEWQPLTYDDPPYQPEDEYVLIEANPG"
BASE COUNT          905 a          905 c         1019 g         1026 t
ORIGIN      
        1 ttgacaataa ccacatttgt cgtgctaact tgctggccta aaaaatggtg aaaaactcgg
       61 aaaaactcgg tgggcaggga ggggattcta aacatggaac gcataatact tatcggcgca
      121 ctcattgcag gtttcgctct ggtacaaccg tcactcgcgg ctggcaaagg aaaggaactc
      181 tctgatcggg caaaagccat ggatgccaat aaggatgggt tggttcaggc gggtgaagcc
      241 cagggcatgt taaaatccaa tttcaaagat atggactgtg acaagaacgg cggattggac
      301 ggcgctgaaa taagcggttt tttttcaggc gggtgtcctg aacccgctat cgctaaaaaa
      361 tcagttaccc aacaggttct gaaatttgcc tcgccaagcc cagcgcgtgc gccaatcaac
      421 tggcgttttc taagaccctg gaccaaaaag gttaccgccg atagcgacgg tgctctcaag
      481 gtagaactca aaaccggtcg caagctggcg acagcactca atgtttatga tcgcgtggtt
      541 gcaaatgtcg ctcagatcgg ttgggctgga ctgcttttgt ctgggaaatt tcagcgctca
      601 ttggtaaccg ggctaccttt cctactcaat aattctgagg aaggctcgct tgctctgtgg
      661 cggctttatg caaaaggaat aatcaaatct gaatatggcg aggtcaagcc actcgcgctg
      721 accactttcc cgatgttggg attccatacc cgcaaaaaac cgataaagtc cttagcagat
      781 gtgaagggat taagaattcg catgaccagt cgtctgtccg ctcagctcct caaggttttg
      841 ggtgctgccc ccatatcaat accttttttc gaccagtatc aggctcttaa tcgcggaatc
      901 atcgatggca cactcgccca gtggactatc ttttacccgt tcaagctcga tgaggtgaca
      961 aaacatcatc tggagggact gcgcatgggc ggcttcccgg gcatggtatt tatcactcac
     1021 aagatctatg acggtttgac cgctgcgagc cgtcgagcaa ttgatgcaaa ttcgggcgaa
     1081 aaatttagtc gtgacttcgg caaattctgg gacggagctc aaacccaggg gcgcgactat
     1141 gtggcgaaga agtcaggaca taccataaca aaaatcagcc cggaagacga agctaaatgg
     1201 cgggagagga tgaagccaat caccactcaa tggatcaaat cgttgtcaga tggccagaaa
     1261 atcctcgacg cgctcaaggc cgagttggcc agtatcaggt caggaaatta ggcctttcaa
     1321 tttttgtaaa gcggaccatc accgatgaat gagcgagttg aacgcgcgaa cgcgatatgc
     1381 atttcgttca cccggcgcat cgccttcggt ggcgtcttgg ccatgctaat tgtcgctgga
     1441 gtaactattg ttgatatctt ttttcgggtt gtgttcaatt ccccgatctc tgccatgaat
     1501 gaaatcgtcg ccatggtttt tgcgattgcg atcgctgcct gttttcctgc gggcatcgct
     1561 caacgagttc atcttagagt gaacattttg tccaactact ttggcgaaaa gctgagtagc
     1621 tggctgacgg caatcggctc actactattg ttttggatgt ttgccctttt tacctggcgg
     1681 attggcgtct atgccacgga aatgtactta cgggacgcca cgacgatgat cctaaatatc
     1741 ccaagaagtc cgttcttatg ggccgttacg tttctatgtg gtatcagcgc gatagtccag
     1801 tatgtggtct ttgcgggaga tgtctttaca gctcgtagca agtcaccggg aatatatcgc
     1861 ggaataacca cactgtgttt acttgggggg ctccttataa cgctggtagc gattcttata
     1921 tttgatggtg cggttgcagc gctctcaact ccggcaaagg catcacccgt gatgacggca
     1981 ctagtaatct ttggacttgt ttgggttttg ctatttttac ttatccccat cggagccgtc
     2041 atggtcttgc tcggattcat aggcatgtcg ctgttgctgg acccaagtcc agcactttct
     2101 gtcgttgggt ccgaagtcgc ggagtttctg accaacggtc aactcgtcgt actccccctg
     2161 tttttaatga tgggtgttct tgcctcggcg gcaggacttt cggaagacat ataccgtctt
     2221 gcccaagcat tactggggaa tttaaggggc gggcttgcac tagccactat tggtggatgt
     2281 gcaggatttg gggctgtcac cggctcttca gtagcaacgg cgacaaccat cgggcgtgtt
     2341 gccttgccgg agatgagcca acgcggatat gaggttggtt tctcagcggg ttgtgtcgcg
     2401 gcgggaggaa cgctcggtgc cctggtacca ccttccagcg ccctcatcct ctatgctttt
     2461 ctgacggagg aatctattgg tcagctattt gttgctgcat tagtaccggc tgcattgggt
     2521 gtccttctct atatgctgac catatccgct tatgtacgat tggttccgaa tgcggcaccc
     2581 gctcccggga aaatcgatac tacagaattg atgtccgagt tgcgccgcgg tttgacagta
     2641 attgtgttgt ttgccgtcgt aatgggtggc atctacatcg gactgttcac agcaacggaa
     2701 gccgcttctg ttggtgtgat tggcgcattt ttagtagcac tgtttcgagg caagttacgc
     2761 ggtggtgctt tttggaatgt gatgggtgaa acggcatcca taaccgcaat gatttatgta
     2821 ttaattctgg gaggtatcac tatttccttt ttcctcggga tcacagaatt accggagttc
     2881 ttgacaaaaa aagttgccca aatggatctc gcaccacttg gaattattac ccttttattg
     2941 gtggtatata ttttattagg ggcagtcatg gaatcctttt ctattatggt aattacggtt
     3001 ccggtaatcg ccggactgat agttgatctc ggtttcgacc taacttggtg gggggtcatt
     3061 atgttggtgg tcgtagagat cggattgata acaccacctt tcgggatcaa cgtgtttgtt
     3121 ctgaaggccg ttgccggcgc cgacctgcca ctgactgcag tgtttcgagg agtaatgcct
     3181 ttcgtcggcg ctgatattgt gaaattaata ctattggttt tattgccttc gttggtatta
     3241 tggctcccgt cgacgatgtt caattaggta agatcaaacc gcaatgtcat taacaccgga
     3301 acaagtgcaa gaatacaccg ataaaggctt catcgttgtt gggagttttt tcaagccaga
     3361 agaaatggcc agaatctcca cctggctcga cgagctgcgg gacaaagagc ctgccccggg
     3421 cgaagaggcc aagtattatg aagccagccc gattagcggc gaaaatatct tggtgcggat
     3481 tgagaacgtg atcggtgatt ataatcgcga catctcggat ctcttgatct cggatcaggc
     3541 tagggaagcg ctgagccaac taatcggtga ggcaccggta ctgttcaaag aaaagatcaa
     3601 ttacaaactg cccggctgcc gcgccgataa gctgcatcag gaccaagccg ccggctggaa
     3661 cacctattgt gattttttca ttaccatggg tattgccgtg gatgagaacc gcctcgacaa
     3721 cggcgcgctc agctttatga tttccggcaa ttacgacaag caactgatga ccgaggaatg
     3781 gcagccgctg acctatgacg atccgcccta ccagccggaa gacgaatatg tgctgattga
     3841 ggccaatccc ggtga
//
LOCUS       DASCNL010000665         3248 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001375199, whole genome shotgun sequence.
ACCESSION   DASCNL010000665 DASCNL010000000
VERSION     DASCNL010000665.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3248)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3248)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3248
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001375199"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..838)
                     /locus_tag="QF359_08885"
     CDS             complement(<1..838)
                     /locus_tag="QF359_08885"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87063.1"
                     /translation="MSAAPLIIDMHTHFFPETWPDLAEKFGTPDWPWMKHHGDGTATV
                     MVGDKEFRPIYSACWDVDKRLEEMDQYGIDIQVICSTPVLFATTRPADQAAECAHIFN
                     DAALEMCGRSSGRLLPLAQVPLQDIDTACNVLSQAMKDGHLGVQIGNHVDDKDLDDEG
                     LVTFLQHCAAENAAVLVHPWDMLTGNRMKKYMLPWLVAMAAETQLSILSLILSGAFER
                     IDKSLRICFAHGGGSFAYLLGRVDNAWKERDIVRVDCPNLPSSYVDRFFVDSAVFDHG
                     ALD"
     gene            complement(835..1398)
                     /locus_tag="QF359_08890"
     CDS             complement(835..1398)
                     /locus_tag="QF359_08890"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF009763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000334 - 3-hydroxyanthranilate
                     3,4-dioxygenase activity [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HJO87064.1"
                     /translation="MPAHPRLQAFNFEKWVEDNADQLKPPVNNKLMHAGVDMIVMVVG
                     GPNTRVDFHDDPVEEWFHQIKGDMMLKIADEGCIYDITVRESEVLMLPPHTIHAPQRP
                     QEGSIGIVVEAPRQEGMLEGFEWYCFECESRVHRVEVPLGGPEGIVEVLPKIYDAFFE
                     DEEARTCPKCGTLHPGKGQAPEGWIVL"
     gene            1720..2352
                     /locus_tag="QF359_08895"
     CDS             1720..2352
                     /locus_tag="QF359_08895"
                     /inference="COORDINATES: protein motif:HMM:NF015682.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HJO87065.1"
                     /translation="MSAKISDEALKVAAEISAATMHEAVGKIGALPSYLKPIAKGMKI
                     CGRAYPVKGPSGCNLWLHRALAKAEPGDVLIADVGDNPEYGYWGDIMGTSAMTRSIVG
                     LVIDGCVRDSDELEKMGFPVFSSGLCIRGTAKLFDGAGSLAEPITIGKITINHGDLVL
                     GDEDGLAIIPANQVEDGIQKSIEREAKEDATKERLRTGETSLDIYGWDKG"
     gene            2355..>3248
                     /locus_tag="QF359_08900"
     CDS             2355..>3248
                     /locus_tag="QF359_08900"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HJO87066.1"
                     /translation="MAHIPGFPSVHFGFEAVKELPGELKNRGIDRPLVITDQGLVKHG
                     VCQQLLDALPSDIAVSVFDQIPENPTIAGVEGALAVYQENNCNGIIGLGGGSVLDSGK
                     ALRVATNQNMAVIEYLNDLSKITADVAPYITIPTTAGTGAEITFGGGIHPETNAPAIS
                     IRSIHVQPDLAICDPDFTMTLPPLLTAATGMDALTHCVEGFLSNNANPPTEAIALDGT
                     RRVVDFIQRAVEDGSDREARLNMSMAALQGGMAIYMGLGPIHALSMCFGDSPLHHGTL
                     VTVAMPAVMRFFNGKLEDGVLE"
BASE COUNT          808 a          833 c          812 g          795 t
ORIGIN      
        1 agtccaaagc gccatgatca aagacagcgc tgtcgacaaa aaaccggtcg acatagctcg
       61 acggcagatt cgggcaatca acgcgcacga tatcgcgttc cttccaggca ttatcgacgc
      121 gtcccagcaa ataggcaaaa ctaccgccgc catgagcaaa gcaaatcctc aacgacttat
      181 cgatccgctc aaacgcaccc gacaatatca gcgataatat agaaagctgg gtttctgccg
      241 ccatcgccac cagccacggc agcatatatt tcttcattcg attaccggtc aacatatccc
      301 atgggtgaac caggacggcg gcgttttctg cggcgcaatg ttgcagaaac gtgaccagac
      361 cttcatcatc caagtctttg tcatcaacat ggttaccgat ctgcacccca agatggccat
      421 ctttcatcgc ctgacttagg acgttgcaag ctgtgtcgat gtcttgcaat ggcacctggg
      481 ccaagggcag caaccggccg ctggaacgac cgcacatttc aagtgcagca tcattaaaaa
      541 tatgtgcaca ttcggccgcc tgatcagctg ggcgagtggt cgcaaacagc accggcgtcg
      601 aacatatgac ttgaatatct atgccgtatt ggtccatttc ctccaaacgt ttgtcaacat
      661 cccagcaggc ggagtaaatc ggtctaaatt ctttatcgcc gaccattacg gtcgccgtgc
      721 catcgccatg gtgtttcatc catggccaat ccggcgtgcc gaacttctcg gccaaatccg
      781 gccaggtctc cggaaaaaaa tgggtgtgca tatcgatgat gagaggcgca gcactcatag
      841 gacaatccaa ccctccggcg cttggccttt gccgggatgc agggtgccac atttcggaca
      901 ggtgcgtgct tcttcatctt caaaaaacgc atcatagatt ttaggcaaaa cctcgacaat
      961 gccttccgga ccgcctagcg gcacttcgac cctgtgaaca cgagattcgc attcaaagca
     1021 ataccactca aagccctcga gcataccttc ctggcgtggc gcttcgacaa cgatgccgat
     1081 agagccttct tgtgggcgct gaggtgcatg gatggtgtgg ggcggcaaca tcaacacttc
     1141 actctcacga acggtaatat catagatgca accttcatcg gcgatcttca acatcatgtc
     1201 gcctttgatt tgatgaaacc attcttcaac cggatcatca tggaaatcca cccgggtgtt
     1261 cggaccaccg acgaccataa caatcatatc aacaccggca tgcatgagct tattgttgac
     1321 cggtggtttt agttggtcgg cattgtcttc aacccatttt tcgaagttga aagcttgtag
     1381 gcgtggatgt gcaggcatga cagctcctat ttatacaatc tcttattaag gtaggatcag
     1441 tttaaaggat taacagtaac tgtctaatgt ttagaataat tttgaaaagc agttaatttt
     1501 gcgtgaatcg cactgccccc gaaagcagac gtggtcccaa gtatttacca cttattatga
     1561 gcaaaattgt tatccaattg ctttatttat taaaggcggg ttagaatttt gtgcaagtgc
     1621 cgtaggatac ccaaattgtt ttgtcgccat cgaggttttt gccatatatg taagagcgag
     1681 tatatttgtt acccttgaat aaccagtgag tggattataa tgagtgccaa aattagcgat
     1741 gaagcgttaa aagtggcagc ggaaatttca gctgcgacga tgcatgaagc ggtcggcaaa
     1801 atcggtgccc tgccatctta tttgaaacca atcgccaaag gcatgaaaat ttgcggccgc
     1861 gcctatccgg ttaaaggacc atcgggatgc aatttgtggc ttcaccgggc gttggccaag
     1921 gctgaaccgg gtgacgtgct aattgccgat gtcggcgata atccagagta cggctattgg
     1981 ggagatatca tgggtaccag cgctatgacg cgcagcattg tcggtctcgt catagacggt
     2041 tgcgtacgcg actccgacga attggaaaaa atgggattcc cggtgttttc gtccggcctg
     2101 tgcattcgcg gcaccgccaa attgtttgat ggcgccgggt ccttggcaga gccgatcacg
     2161 attggcaaaa ttactataaa tcacggtgat ctcgtcttgg gagatgagga cggcttggcc
     2221 atcattccag ccaatcaggt tgaggacggt attcagaaat ccattgagcg tgaagctaag
     2281 gaagacgcca ccaaagaacg ccttagaacc ggcgaaacct cgcttgatat ttatggttgg
     2341 gataagggct agtcatggca catattccgg gttttccgag cgttcacttt ggttttgaag
     2401 cagtaaaaga actgccaggc gagctcaaaa atcgcggcat tgaccggcca ttggttatca
     2461 ccgatcaggg attggtcaaa catggcgtct gccagcaatt actggatgcc ctaccctcag
     2521 atatagcggt ttcagtattt gaccaaatcc ctgaaaatcc aaccatcgct ggggtcgagg
     2581 gcgcgctcgc ggtttatcag gaaaataatt gcaacggtat aatcgggctc ggtggcggct
     2641 ccgtacttga ttccggcaag gcacttcgcg ttgccactaa tcaaaatatg gcggtcattg
     2701 aatacctcaa tgatctcagc aaaataaccg ccgatgttgc tccgtatatt accattccaa
     2761 cgaccgccgg cactggcgcg gaaatcacct ttggcggcgg catccatccc gaaaccaatg
     2821 cgccagcgat atccattcgc tcgatccatg tgcaacctga tctggcaatt tgtgatcctg
     2881 acttcaccat gaccctgcca ccacttttaa cggcagccac cggtatggac gcgctcaccc
     2941 attgcgttga gggctttctt tccaataacg ctaatccgcc aaccgaagcg attgctttgg
     3001 acggtacgcg ccgtgtggtc gattttattc aacgcgctgt tgaggatggc agtgaccgcg
     3061 aggcgcgcct caatatgtcg atggcagcct tgcagggcgg catggcgatt tatatgggtc
     3121 tcggccctat tcatgcgctg tcgatgtgtt ttggcgacag cccgctgcat catggtacgc
     3181 tggtcaccgt agcgatgccg gcggtaatgc gcttttttaa tggtaaactt gaggatggcg
     3241 tgcttgag
//
LOCUS       DASCNL010000666         1091 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001375644, whole genome shotgun sequence.
ACCESSION   DASCNL010000666 DASCNL010000000
VERSION     DASCNL010000666.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001375644"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1091)
                     /locus_tag="QF359_08905"
     CDS             complement(<1..>1091)
                     /locus_tag="QF359_08905"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJO87067.1"
                     /translation="MLQEPKSLLADVRVIEMSHVMAAPTTGLMLADMGADVIKVERLP
                     MGDDVRRLAPYVDDESAPFAMMNRNKRSIGLNLKTDVGKAALKRLIEGADVFVENYRQ
                     GAMEHYGVGYEQIKDDNLGLIYCSISGYGRTGPYAEKGGFDLVAQGMSGIMSITGESA
                     ERPPVKVGAPVTDITAGTLGAMGILGALFHKAQSGEGQFVDTSLFEAGIMHTYWQSAI
                     FMASGELPVAMGSAHPLMAPYQAFQTSDGWLNIGSANQGLWQKLTAFLGVPELADDPR
                     FREPKDRIDNLAELVDELTSFFKTDTTEAWQQKLEAAGIPAGPVLNIEQMTANEQTLA
                     RDMVADVGSSEGSSLRVLGHPVKYSETPA"
BASE COUNT          239 a          335 c          279 g          238 t
ORIGIN      
        1 cgccggtgtc tcagaatatt taaccggatg gccgagtacg cggagtgaac tgccctcgga
       61 cgagccaacg tcggcgacca tatcccgcgc tagagtttgc tcatttgccg tcatttgctc
      121 gatattgagc accggacccg ccggaatgcc cgccgcttca agcttttgct gccaagcttc
      181 ggtagtgtca gttttgaaaa agctagtgag ctcatcgacc agctcagcca aattatctat
      241 gcgatccttg ggttcccgga agcgtggatc atcagcaagt tcgggcacgc ctagaaacgc
      301 cgtcagtttc tgccagagcc cctgattggc cgagccaatg ttgagccagc cgtcgctggt
      361 ctgaaaggcc tgatagggtg ccatcaacgg atgcgccgag cccatcgcca ccggcagttc
      421 tccggaagcc atgaaaatcg ccgattgcca ataggtgtgc ataatgccgg cctcaaatag
      481 cgacgtatca acaaactggc cctctccgga ctgggcttta tgaaaaagcg ccccaagaat
      541 acccattgct cccaacgtgc cggcagtaat gtccgtcacc ggcgctccga ctttgaccgg
      601 cgggcgttca gcgctttcgc cggtgatact catgatacca ctcatgcctt gggcaaccag
      661 atcaaagccg cccttctccg catagggccc ggtccgccca tagcccgaga tcgaacagta
      721 aatcagaccg agattgtcat ctttgatttg ctcatagccg acgccgtaat gctccatcgc
      781 gccctggcga tagttttcaa cgaagacatc ggccccttcg atcagccgtt tgagcgccgc
      841 tttaccgacg tcggttttaa gattaagccc aatgctgcgc ttgttgcggt tcatcatcgc
      901 gaacggcgca gactcgtcat caacatatgg tgctaggcgg cggacatcat cacccatcgg
      961 caaacgctcg actttaatca catccgcccc catatcagcc agcatcaacc cggtcgttgg
     1021 cgccgccata acgtggctca tctcgatgac ccgcacatca gcgagtaggg atttgggttc
     1081 ttggagcata g
//
LOCUS       DASCNL010000667         1722 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001375683, whole genome shotgun sequence.
ACCESSION   DASCNL010000667 DASCNL010000000
VERSION     DASCNL010000667.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001375683"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1480)
                     /locus_tag="QF359_08910"
     CDS             complement(<1..1480)
                     /locus_tag="QF359_08910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87068.1"
                     /translation="MSRYLDLIFVGPEQAVPIIVALVLWLGLVGLGALITSRDRITET
                     NVIFGWAVVSGVFTVVGIFVRAPFLYLAIALAVLAVIGIIHVLRSGQHLFVPGAWRVL
                     VLALPLLWIAGAMDPSQWDEFSHWLPASQYLLAINGFPNNQLPYLGAFMFPGYPFGWP
                     MLTYLSSLIAGQFLNNIGGVLNILLLLTFSTFALRTALRVAGRELSVQINWGFAAFIV
                     LFATIFNPTFIQKIVLTAYSDVSTSVVTGFSFLLGYYFIESLARRIKLPPVAAALQLA
                     LALSLLVNVRQSNLVLLVIIVFAVTVLALRDQEINFGAYLRYLSLAVIPAIIIYLAWR
                     YHIVISLGKVSNAELTLRAFDSWYIEGIPAIISQMGVVAFKKIGFFAPMLIACIFAIR
                     GLIRFETKFDRISVLVAVLFLGYTAFLLMMYVGYFGRQSALAVISFWRYSTHNGMVAV
                     AFISTGLIYLFRHRLSHDQLPVWLNGFGILLVVVLPFGLAHKL"
BASE COUNT          577 a          412 c          376 g          357 t
ORIGIN      
        1 gtaatttgtg cgccaatccg aatggtaaaa cgacaactaa cagaatgccg aaaccattta
       61 accaaaccgg taattgatcg tgactgaggc gatgtcgaaa cagataaatc aaaccggttg
      121 aaataaaagc cacggcgacc atgccattgt gagtgctgta acgccaaaat gaaatcacag
      181 ccaaagcgct ctgtcggcca aaatagccga catacatcat cagcagaaat gctgtgtagc
      241 ctaaaaataa aacagcgacg agaaccgaaa ttcgatcaaa ctttgtctca aatctgatga
      301 gaccgcgaat ggcaaatatg caagcaatca gcattggggc gaaaaagccg attttcttaa
      361 atgccacgac tcccatctga gaaatgatcg ctggtatacc ttcaatgtac caactgtcaa
      421 aagcccttaa tgttaattcc gcattggata cttttccgag gctgataaca atatggtagc
      481 gccaagccaa ataaataata atcgccggta ttacagcaag agagagatat cgcagatagg
      541 caccgaaatt aatttcttga tccctaagcg ccagtaccgt cacggcaaag acgatgatca
      601 cgagcaatac gagattggat tggcgcacgt taaccaatag gcttaaagct aatgccaatt
      661 gcaaagcggc ggcgacaggc ggcagcttaa tccgtctggc aaggctctcg ataaagtaat
      721 aacccaacaa aaatgagaat ccggtaacaa ctgatgtgct gacatccgaa taggctgtaa
      781 gtactatttt ctgaataaag gtcggattaa atattgttgc aaacaaaaca atgaaagcgg
      841 caaatcccca atttatctgt accgataatt cccggccggc aacccgcaaa gccgttctga
      901 gagcaaatgt cgaaaacgtt aaaagcagta ggatatttaa cacaccgcca atattattca
      961 gaaattgacc agcaattaga ctggatagat aggtgagcat gggccaacca aagggataac
     1021 cgggaaacat aaaggctccg agatagggca gttggttatt tggaaaacca tttatggcca
     1081 agagatattg tgacgccggc aaccaatggg aaaattcgtc ccattgggag gggtccatcg
     1141 caccggcaat ccaaagcagc ggcaatgcca aaaccaatac ccgccaagct cccggaacaa
     1201 acagatgttg accggatcgt aaaacatgaa tgatcccaat cacggctaga accgccaacg
     1261 cgatcgcgag gtacaagaat ggtgcgcgaa caaagatgcc aacaacagtg aaaacgccag
     1321 aaacaacagc ccagccaaaa atcacattgg tttctgtaat tctgtctcga cttgtgatca
     1381 gcgcaccgag ccccactaag ccaagccata aaacaagcgc gacaattata ggaactgctt
     1441 gttcggggcc aacaaatatt aaatcaagat aacgagacat ttatttctct atgtatttaa
     1501 gatgtgcaaa ttaaaaaaac cgcacccgag gttttacccc aaaacgcggt tcttttataa
     1561 gcatttaagc taaatagttt gtgaacagct ttacatcatg ccgcccatac cgcccatgcc
     1621 gcccatatcg ggcatcgcgg gcgcaccagc cggtgcttct gacggcttat cggcgaccat
     1681 ggcttcggtg gtgatcagca gacccgcaat cgacgccgca tc
//
LOCUS       DASCNL010000668         1456 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001376585, whole genome shotgun sequence.
ACCESSION   DASCNL010000668 DASCNL010000000
VERSION     DASCNL010000668.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1456)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1456)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001376585"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="QF359_08915"
     CDS             complement(<1..447)
                     /locus_tag="QF359_08915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HJO87069.1"
                     /translation="MNKIFKLTSLLAIITAGIVFIIDPALAAEEKPKLDTGDTAWLLT
                     STAIVLLMTIPGVALFYGGMTRKKNVLATLMQSFAITCLISVIWMVIGYSLAFSKGSN
                     SYVGNFDLAFLEHLTVGAINGTIPDSLFVVFQMTFAIITAALITGAV"
     gene            complement(468..806)
                     /locus_tag="QF359_08920"
     CDS             complement(468..806)
                     /locus_tag="QF359_08920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HJO87070.1"
                     /translation="MKLITAIVKPAKLDDVRTALVDIGIQGLTSSEVSGFGRQKGHTE
                     IYRGAEYAISFIPKIKIEVAVSDDQVDAVIEAISGAAGTGNIGDGKIFVLDLGQAVRI
                     RTGETGNEAL"
     gene            1083..>1456
                     /locus_tag="QF359_08925"
     CDS             1083..>1456
                     /locus_tag="QF359_08925"
                     /inference="COORDINATES: protein motif:HMM:NF013646.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HJO87071.1"
                     /translation="MTKSAENNLHFDLLADVLIVGGGMAGCSLACALAGTGLNVVILD
                     CVKQSVQTADEFDGRASAIAEAPKKMLDQIGMWRHLGKNFAPILDIRVADGESRLFLH
                     YDHEDIGEDAFGYMVENRHFRQA"
BASE COUNT          398 a          339 c          337 g          382 t
ORIGIN      
        1 aactgcaccg gtgatcaaag ctgcagtaat aatcgcaaag gtcatttgga aaaccacaaa
       61 cagagaatcg ggaatggtgc cgttaatcgc gccgaccgtt agatgttcca aaaaggcgag
      121 gtcgaaatta ccaacataag aattgctacc cttggagaag gcgaggctgt agccaatcac
      181 catccaaatc acggagatca gacaggtaat agcaaagctt tgcattaaag tggcaagcac
      241 gtttttcttt cgcgtcatac cgccataaaa tagcgccacg ccgggaatgg tcatcaaaag
      301 aacaatcgcc gtcgatgtga gcaaccaggc cgtatcgccg gtatcaagtt tgggtttttc
      361 ctctgccgcc aaggcagggt caataataaa gacaatacct gccgtaataa tcgccagcag
      421 agatgtcagt ttaaatatct tgttcatagt attactcctg agatcgatta aagggcttcg
      481 ttgccagttt cgccggtgcg aattcggaca gcctgaccca gatctaaaac gaaaattttg
      541 ccatcaccga tattaccagt accggcagca ccagagatag cttcaatcac cgcatcgact
      601 tgatcgtcgg atacggcaac ttcgattttt attttcggaa taaaactgat ggcatactcc
      661 gcgccacgat aaatttcagt atgtcctttt tgacggccaa agcctgatac ttcgcttgac
      721 gtcaaacctt gaatgccaat atccaccaaa gcggttctga catcgtccag cttggctggt
      781 tttacaatcg ctgtgatgag tttcatctcg cgactccttt ctattaagcg ttcactcaat
      841 ttgccacgac actcaacccg tcataggcca agcctgtctt tggctcgata gcgtttacat
      901 tccaagaact atgccaaaat cttaaaatcg tttaaatata ataggttagg tagtttatcg
      961 ggtggggtgt ctaaatttat atgcctattt attaatcaaa ttagcaccaa tattattata
     1021 tggtgataat ttaggcataa tagagactgg acaatcgctc gaatggagcg cagtggtgtt
     1081 gcatgactaa gtctgccgaa aacaaccttc atttcgactt gttggccgat gttttaattg
     1141 tcggtggcgg tatggcaggg tgcagcctcg cctgcgctct ggccggcacc ggattaaacg
     1201 tcgtaatcct tgattgcgtc aaacaatctg tccaaacagc agatgagttt gacggccgcg
     1261 cctcagccat cgcggaggca ccgaagaaaa tgctcgacca gattggcatg tggcggcatt
     1321 tagggaagaa ttttgcgccg atattggata tccgcgtcgc tgacggtgag tcccggctgt
     1381 ttctccatta cgatcatgaa gatatcggtg aggatgcgtt tggctatatg gttgagaacc
     1441 gtcattttcg ccaagc
//
LOCUS       DASCNL010000669         1879 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001377743, whole genome shotgun sequence.
ACCESSION   DASCNL010000669 DASCNL010000000
VERSION     DASCNL010000669.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001377743"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="QF359_08930"
     CDS             complement(<1..205)
                     /locus_tag="QF359_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HJO87072.1"
                     /translation="MAAPAWTQAPPATTGKPLPRFVSLRADEVNLRTGPGVRYPVDWV
                     YQRKNLPVEVIAEFGTWRKVRDVQ"
     gene            514..1497
                     /locus_tag="QF359_08935"
     CDS             514..1497
                     /locus_tag="QF359_08935"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HJO87073.1"
                     /translation="MSSKVKVVVTRKLPDAVETRMMELFDTRLNLNDIALTHEELIMA
                     VQSAEILVPTVTDNIDAEVINSAGDQLKMIANFGAGVDHVDLTAAAEKGIIITNTPDV
                     LTEDTADLTMALVLMTPRRMGECERFVRAKEWSGWTPTFMMGNRINGKRLGIIGMGRI
                     GTAVAERARGFGLAVHYHNRHRVNEELERELEVTYWENLDQLLTHMDIVVVTCPSTPA
                     TYHLLSEQRLKLMQPHSYVVNTSRGNIIDETALVSLLEQGLIAGAGLDVFENEPAIHP
                     KLYDMENVVILPHIGSSTIEGRVAMGERVIVNAKTFIDGHKPPNRVLETLL"
     gene            complement(1535..>1879)
                     /locus_tag="QF359_08940"
     CDS             complement(1535..>1879)
                     /locus_tag="QF359_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase"
                     /protein_id="HJO87074.1"
                     /translation="AILRFDGQLSVFKPHLRTDGDCPCYRCLYPEAPPPDMVLSCAEA
                     GVLGALCGTIGSLQAAEVLKEITGAGESLAGSLIIFDGLRTEFRKIRIKPDPKCTLCS
                     NQASTTDLSANL"
BASE COUNT          486 a          454 c          474 g          465 t
ORIGIN      
        1 cctggacatc cctaaccttt cgccaggtgc caaactcagc aatcacttcg accggcaaat
       61 tttttcgctg ataaacccaa tcgaccggat agcggacgcc gggtccggtc cggagattga
      121 cttcatcggc ccggagtgaa acgaaacgtg gcagcggctt gccggtggtg gcaggcggtg
      181 cctgagtcca agcgggcgca gccaataccg aaaccaacaa ggccgtaaca aacgaaattt
      241 ttaaatttct tgagtaattg atcatgagct tgatttacta aactaatccc agcgacaaaa
      301 aaagatagtt ttaaagaact aaaaatcact tcctctcatt tgctatgagt atattatttg
      361 aaccttaacg ctcgattaac tgataagcaa taaggcattc gctatgtggc ctggacaaga
      421 gccctgctta ttggtattgc catctctgaa agaagtgcgt aatccacctg ttatgtcact
      481 caacttttgg gatttttggg gaaaaatttt tccgtgtcta gtaaagttaa agtagttgtt
      541 acccgcaaat tacctgatgc cgttgaaacc cggatgatgg agttgttcga tacgcgcctt
      601 aatcttaatg atattgcgct cacccatgaa gaattaatta tggctgtgca gtcggctgag
      661 attttagtcc ccaccgttac cgataatatt gatgcagagg ttatcaactc tgctggcgac
      721 cagctcaaaa tgatcgccaa tttcggtgct ggtgttgatc atgtcgatct cacggcggcg
      781 gctgaaaaag gcattatcat caccaataca ccggatgtct tgaccgaaga tacagctgat
      841 ctcaccatgg cgctggtttt aatgacgccc cggcgtatgg gcgaatgtga gcgctttgtc
      901 cgcgctaaag aatggtccgg ctggaccccg actttcatga tgggaaaccg gattaacggc
      961 aagcgcctag gcattatcgg catgggccgg atcggcacgg cagttgctga acgcgccaga
     1021 ggatttggtc tggccgtcca ttatcacaac cgccatcggg tcaacgaaga acttgagcgc
     1081 gaattagagg tgacctactg ggaaaacctc gaccagttgc tcacccatat ggatattgtt
     1141 gtcgtaacct gtccatcaac gccggcgacc tatcatttat tgtccgagca acggctcaag
     1201 ctgatgcagc ctcacagcta tgtagtgaac acgtcgcgcg gcaacatcat tgatgaaact
     1261 gcactggtga gtctgctgga acaaggtttg attgctggtg ccggacttga tgtttttgaa
     1321 aatgaaccgg ccatacatcc taagctttat gatatggaaa acgtcgttat cctgccgcat
     1381 ataggctcgt cgaccattga gggccgggtg gccatgggag agcgggtgat tgtcaacgct
     1441 aagaccttta tcgatggcca taaaccgccg aaccgggtgc tcgaaacgct attgtaatag
     1501 ttaaccattg taaaaaatgt accaggtacc tttattacaa atttgcggaa agatcagtgg
     1561 tgctggcctg gttgctgcaa agggtacatt tcgggtctgg tttaattctg attttgcgaa
     1621 actcggtgcg cagcccgtca aaaataatca acgagcccgc gaggctttca ccggcacccg
     1681 ttatttcttt taaaacttca gctgcctgta acgagccaat ggtaccacag agagcgccca
     1741 atacccccgc ctcagcgcag ctcagcacca tatcgggagg cggggcttca gggtagaggc
     1801 agcggtaaca aggacagtcg ccgtcggttc tgagatgcgg tttaaacacg cttagctggc
     1861 cgtcaaaacg taggatggc
//
LOCUS       DASCNL010000670         2213 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001378726, whole genome shotgun sequence.
ACCESSION   DASCNL010000670 DASCNL010000000
VERSION     DASCNL010000670.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001378726"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="QF359_08945"
     CDS             <1..267
                     /locus_tag="QF359_08945"
                     /inference="COORDINATES: protein motif:HMM:NF024858.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HJO87075.1"
                     /translation="KEESLMANTALSARSAIRKRSVLTSGHRTSISLEQAFWLKLKEL
                     SDANKKSINQMVTEIDNDRLNNPNGNLSSAIRVYILEQLEALQP"
     gene            complement(268..>2213)
                     /locus_tag="QF359_08950"
     CDS             complement(268..>2213)
                     /locus_tag="QF359_08950"
                     /inference="COORDINATES: protein motif:HMM:NF024893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HJO87076.1"
                     /translation="APTPVLNPLAALAPLGEFDANITIDLKSLTVQEIPIKGLNLDTS
                     IFDGKLTVKEFRTANAAGMTVNVSGNIDGLKKSNKLIDPAFKNFKFSLRGKSLARLFS
                     LAKFKPPASAGQIGAVRLSGTLNGRPHALNVTTNTAMLGGKFTLNGVVRPLTVTPSVD
                     GEFSANHPNLMKLLRRLGSKYRPSGKITGGINLRGRIAGNAQLMAFSKLAGKAAGINL
                     QGGAAMDLSRARPIITANLKTGPIVIDDLLPAKRTAHHDQKLREFEHALWNSQKTPML
                     VQASFNRAPKNLATPMSILKVVAKSSAPWSNDPIDLAFLKSFDGNIQLQSDSLRFQKY
                     LVSSVNLATALNSGVFDLQWLTGNAYGGDIKIDGRVIAGDKRNQFQTRFNIAGFDAGT
                     LLQSLGTKGFQRGALDVVGEFRTLGRSTVDLVRELGGGGTISVRGLDISSAARRGSAL
                     SGIAGLFLSLNQFGNTLTRGKTSSKSADFRTSFRMAKGVARFDDMSLASGLGAGSAKG
                     TIDLPNWRISTVGEIELSQNILAQLLLRNSSKQPVLPFNISGRLDNPKVKLETAALTK
                     GGIRLPGSIGKKLDKLRKKKGVGAILDQIFPQAKSGSTGSSSSPSSGAPPPQSPPPQH
                     VPQQQQKPKVEDFLKGILKGLGR"
BASE COUNT          562 a          577 c          543 g          531 t
ORIGIN      
        1 aaagaagaaa gcttaatggc caataccgct ctttcagcgc gcagcgcgat acgcaaacgc
       61 tcggtcctga catcgggcca ccgcaccagc atatccttgg aacaagcgtt ttggctcaag
      121 ctgaaggagc tcagcgacgc caacaaaaaa tcaatcaatc aaatggtcac cgagattgac
      181 aacgaccggc tcaataatcc aaacggcaat ctgtcgagcg ccattcgtgt ctatattttg
      241 gaacaacttg aagcgctcca accgtaatta tctgccgaga ccctttagaa tacctttgag
      301 aaaatcctcg actttgggtt tctgttgctg ctgcggcaca tgttgaggtg gtggcgattg
      361 cggcggggga gccccgctgc taggcgaact tgaggagccg gtagaacctg acttcgcttg
      421 cgggaatatt tgatcgagaa tagcgccaac cccctttttc ttccgcaatt tatcgagctt
      481 tttaccaatg cttccgggca ggcggatacc gcctttggtg agggctgcag tttctaactt
      541 aactttcgga ttatccaggc ggcccgaaat attaaatggc agcacaggtt gtttactaga
      601 attgcgcagt agcagttggg ccaaaatatt ttgcgacaat tcaatttcgc ccactgtact
      661 gatgcgccaa tttggtaaat ctatcgtacc cttggctgag ccggcaccca atccggatgc
      721 caaactcatg tcatcaaatc gcgccacgcc tttagccatc cgaaagctgg tgcgaaaatc
      781 ggctgatttg gaagaggttt taccgcgcgt caaggtgttg ccaaattggt tgagcgacag
      841 gaacagaccg gcaatgcctg agagggctga gccgcgtctg gcagctgagc taatatccag
      901 gccacgcact gaaatcgtac cgccgccgcc aagctcccgc accaaatcca cagtgctgcg
      961 gccaagcgtg cgaaattcac cgaccacatc taacgcgcct cgctggaagc ccttggtgcc
     1021 cagagattgc aagagcgtgc cggcatcaaa gccggcgata ttaaaccggg tttggaattg
     1081 atttctcttg tcaccggcaa taacccggcc atcgatttta atatcaccgc cataggcgtt
     1141 accggtcaac cactgcaaat caaaaacacc gctattgagg gcggtagcta aattaaccga
     1201 actgaccaga tatttttgaa accgcaaaga gtctgattgc agttggatat tgccatcaaa
     1261 tgatttgaga aaagccaggt caatcggatc attggaccac ggcgcactgc tttttgccac
     1321 cactttgagt attgacattg gcgtagccaa gttttttggc gcccggttaa atgacgcctg
     1381 caccaacatg ggtgtttttt gggaattcca tagggcgtgc tcaaattcac gcagcttctg
     1441 atcatgatgg gctgttcgtt tggcgggcaa gagatcgtcg atcactatcg gaccggtttt
     1501 aaggtttgca gttataatcg gtcgcgcccg gctgagatcc atcgccgcac cgccctgcaa
     1561 attaataccg gcggcctttc cagccaattt tgagaacgcc attaattgag cattgccagc
     1621 aatccggccc cgcaaattaa tgccccccgt tattttaccg gacggccggt acttgctgcc
     1681 aaggcgacgg agcaatttca tcaaatttgg gtgattggcg gaaaattcac cgtcaacact
     1741 gggagtcacc gttagaggcc taaccacacc gttcaaagta aactttcccc ccagcatagc
     1801 ggtgttggtg gtcacgttca gggcatgagg tctgccattt aatgtacccg acagacgcac
     1861 ggcaccgatc tggccagctg aagccggcgg cttaaattta gccagactaa aaagccgggc
     1921 gagactttta ccgcgcagac taaatttgaa gtttttaaaa gctggatcga tcagcttgtt
     1981 agatttctta aggccatcga tattaccact gacattaacc gtcatcccgg cggcgttagc
     2041 ggtgcggaat tctttcaccg tcaacttacc atcaaatata ctagtatcta aattcaggcc
     2101 tttgatcgga atttcctgaa ctgtcagcga tttcaaatca atcgtgatat ttgcatcaaa
     2161 ttcaccaagc ggcgctaagg cagccaaggg gttcagaacg ggagttggag ccg
//
LOCUS       DASCNL010000671         1900 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001379095, whole genome shotgun sequence.
ACCESSION   DASCNL010000671 DASCNL010000000
VERSION     DASCNL010000671.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001379095"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(269..1309)
                     /locus_tag="QF359_08955"
     CDS             complement(269..1309)
                     /locus_tag="QF359_08955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HJO87077.1"
                     /translation="MLSQIFGFLSADMAIDLGTANTLVYVKGKNIVLNEPSVVAITEV
                     KGKKQVLAVGNDAKQMLGRTPGNIQAIRPLRDGVIADFEIAEDMIKYFIRKVHNRRSF
                     ASPMIVICVPSGSTPVERRAIQESAEAAGARKVFLIEEPMAAAIGAGLPVTEPTGSMV
                     VDIGGGTTEVAVLSLGGIVYARSVRVGGDKMNEAIIAYIRRNHNLLVGEGSAESIKEE
                     IGSACSPEEGEGRTMEIKGRDLMNGVPKELIISERQIAESLTEPVSQIIEAVKSTLEH
                     TAPELAADIVDKGIVLTGGGALLTNMNYVLLHATGLPVSIAEGPLSCVAMGTGRALEE
                     MKKLHHVLTTMY"
     gene            complement(1524..>1900)
                     /locus_tag="QF359_08960"
     CDS             complement(1524..>1900)
                     /locus_tag="QF359_08960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /protein_id="HJO87078.1"
                     /translation="INLEKLEVLCGTEHQPPKASMTLNVDGEQKSTKMTGDGPVDAIF
                     KGIKQLTGMEPHLQLYQVHAVTQGTDAQAEVTVRLEEDGKTVNGQGADTDTMVASARA
                     YINALNKLLVKREKSAPSALSA"
BASE COUNT          482 a          513 c          409 g          496 t
ORIGIN      
        1 catcggtaac ttcggcgcgc acccggtcca ccagcacgac atcaactttg ccaagcagca
       61 tcaagccaaa ggctacagca atgagcccaa ggtacatgaa ccgctgagcc gaacttttca
      121 gcggcaccgc aatgcgtaaa agcgcgctag ggcgctgttc caatttgcgt ctccatttcc
      181 tctaacggcc taattttact accataataa aatggtacca aaggtcgccg tttttaactg
      241 gtgtacttta gttcaattcg cacccagatt aatacatcgt tgtcaacaca tggtggagtt
      301 ttttcatttc ctccaaggcg cgtcctgttc ccatggctac acaagacaat ggtccttcgg
      361 caatcgatac cggcagaccc gtcgcatgga gcaaaacata attcatattt gtcaacaagg
      421 cgccgccacc ggtcagcacg atacccttat caacgatatc ggcagccagt tctggcgcgg
      481 tatgctctaa cgtggatttc accgcttcaa ttatctgact cactggttca gtaaggcttt
      541 cagcaatttg gcgttcgctg atgattaatt ctttcggcac gccgttcatc aaatcgcggc
      601 ccttaatttc catcgtccgg ccttcgcctt cttccggcga acaggctgag ccgatttctt
      661 ccttaatgct ctcagcacta ccttcaccaa caagcaaatt atgattgcgg cggatatagg
      721 caatgatggc ctcgttcatt ttatcgccac cgacccggac agagcgcgca tagacgatac
      781 cgcccaaact cagcaccgca acttccgtcg taccaccacc gatatcaaca accatcgagc
      841 cagttggctc ggtcaccggc agccctgcac caatcgcagc agccatcggt tcttcgatta
      901 gaaacacttt gcgagcaccg gcggcctcag ctgattcctg aatagcgcgg cgttccacag
      961 gggtcgagcc cgagggcaca caaattacaa tcatcggtga agcgaaactg cggcgattat
     1021 gcactttacg gataaagtat ttgatcatgt cttcggcgat ttcaaaatcg gcaatgacac
     1081 catcgcgcaa aggacgaatg gcctgaatgt tgcccggtgt ccggcccagc atttgcttgg
     1141 catcattgcc gacagccaag acctgcttct tgcccttaac ttcggtaatg gcgaccacgg
     1201 acggttcatt cagtacaata tttttgcctt tgacataaac cagggtatta gccgtaccaa
     1261 ggtcgatggc catatcagcc gataaaaatc caaaaatttg cgacagcatt taggctctca
     1321 atatctaaaa attctgataa gtcctggtaa ttatatacaa tcagggctaa ttcttaatat
     1381 tctctaaccg attcgctaag attaatcaaa gagatacgac tagtgtttca ataaaatacc
     1441 ggggtatttc tggattctac cccagtattt caggaactaa aacgatgaat tggtacgtat
     1501 tgggaaaaaa ttcaccctat ttatcaggct gacagagcag acggtgctga tttctctcgt
     1561 tttaccagta gtttattcaa cgcattaata taagcgcggg cagaggcaac catggtatcc
     1621 gtatccgccc cttggccgtt gacggtttta ccgtcttctt caaggcgcac ggttacttcg
     1681 gcttgggcat cagtgccttg ggtcaccgcg tgaacttgat acaattgcag atgtggctcc
     1741 atgccagtta gttgcttgat acctttgaaa atcgcatcaa ccggaccgtc acccgtcatc
     1801 tttgtcgatt tttgttcgcc atcaacattg agcgtcatcg aagcttttgg cggctgatgt
     1861 tcggtgccgc acaacacttc caatttttcc aaattgatta
//
LOCUS       DASCNL010000672         2407 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001380122, whole genome shotgun sequence.
ACCESSION   DASCNL010000672 DASCNL010000000
VERSION     DASCNL010000672.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001380122"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1144
                     /locus_tag="QF359_08965"
     CDS             <1..1144
                     /locus_tag="QF359_08965"
                     /inference="COORDINATES: protein motif:HMM:NF014758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO87079.1"
                     /translation="KRAGISHARIKKVDVSEAEKMPGIMATLIGKEIPVNSFGPSYQD
                     QPLLADNIVRHAGDGVAAVTAVTEQQALDALEKIKVEYEELTPVYDPLEAMKDDAVKI
                     YNDESNVYSTKTIKKGDVEKGFEESDHIFESTFTTQMVEHVPMEPHASIAEWDANGRV
                     TIHTSLGRITLGRADISRTLELPINRIRIIATVVGGNFGGKNEITTEPILALLSKKTG
                     CPVKSVYTREDEFISSTTRHPFIMEYKTGMSKEGKIMARKVRLICDGGAYCSWSETTL
                     GKACILSAGPYNIDNFRVDAYAVYTNKTMTGAMRGFGAPQVCFAYESHMDDMAKALGI
                     EPVELRLRNTFHEGSASPTGQVLEAVVVRDSLEMATERFGWKEWQK"
     gene            1141..2175
                     /locus_tag="QF359_08970"
     CDS             1141..2175
                     /locus_tag="QF359_08970"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO87080.1"
                     /translation="MKHRGKGVGCMWYPIGFTVLANPSAATVKVNEDGTATLLTGTVE
                     TGQGSLTVLGQIAAEELGISTDDVHVVSADTDTTPMDTGAIASRTTYVTGNAIKLAAE
                     NAKQILFEVAAPMLDVRPDQLEAIDRKIQVKYFPQRCLPIADVALQAQFVMGRPAIGS
                     ASYNPPTVAMNSETGQGKPFSTYVYATQCAEVEVDDETGEVDVIYMSAAHDCGTAINP
                     MLVEGQIEGGISMGIGYALQEEMLFDDEGKQINPNLTNYIMPTSLDMPEINVDIVENF
                     DPTGPFGAKGVGEPTAVPTAAAICNAIHDAVDVRITSLPATAEKVLKAIKEKNGPQIG
                     EEQKALPAAE"
     gene            complement(2228..2407)
                     /locus_tag="QF359_08975"
                     /pseudo
     CDS             complement(2228..2407)
                     /locus_tag="QF359_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611382.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          616 a          581 c          661 g          549 t
ORIGIN      
        1 caagcgggcg ggcatttctc atgccaggat caagaaagtt gatgtaagtg aggctgagaa
       61 aatgccgggc atcatggcga cgctgattgg caaggaaatt ccggtcaata gtttcggccc
      121 atcttaccag gatcagccct tgctggcaga caatattgtc cgccatgccg gtgacggcgt
      181 tgctgcggtt actgcggtaa ccgagcagca agctttagac gcgctcgaaa agattaaggt
      241 ggagtatgaa gagctgacac cggtctatga tccgcttgaa gcaatgaagg atgatgcggt
      301 caaaatttat aatgatgaaa gcaatgtcta ttcgaccaag accatcaaaa aaggtgacgt
      361 cgaaaaaggc tttgaagagt ccgaccatat ctttgagagc accttcacca ctcagatggt
      421 tgagcatgtg ccgatggaac cccatgcttc aattgccgaa tgggatgcca acggaagggt
      481 gacaattcat accagcctcg gtcggattac cctgggccgc gccgatatat cacgtaccct
      541 cgaactgccg atcaaccgta ttcgtatcat tgcaacagtg gtcggcggga acttcggcgg
      601 taaaaatgag atcaccacag agccgatcct ggcgttgctt tccaagaaaa ccggctgccc
      661 ggtgaaatct gtttataccc gggaagatga gtttatctct tcaacgacac gccatccttt
      721 catcatggaa tataaaaccg gcatgtcgaa agagggcaag attatggccc gcaaggtccg
      781 gctcatctgt gacggtggtg cctattgttc ctggtctgaa acgacgttgg gcaaggcctg
      841 catcttgtcg gcgggcccct ataacatcga taacttccgt gtcgatgcct atgcggtcta
      901 caccaacaag accatgaccg gggcgatgcg gggctttggc gcaccgcaag tgtgttttgc
      961 ttatgaatcc cacatggatg atatggcgaa ggcactgggt attgagccgg tggaactccg
     1021 cctcagaaat actttccatg aaggttcggc gagcccgact gggcaagtgc tggaagccgt
     1081 tgttgtcagg gattcgctgg agatggcgac cgaaagattt ggctggaagg agtggcagaa
     1141 atgaaacatc gtggaaaagg cgttggctgc atgtggtacc caattgggtt taccgtcctt
     1201 gcgaacccaa gtgctgcaac agttaaagta aacgaagacg gcacggcgac tttactgacc
     1261 ggcacggttg aaaccggcca aggctccctg accgtattgg gtcaaatcgc cgccgaggag
     1321 cttggcatct ccaccgatga cgttcatgtc gtctcagccg ataccgatac aacaccgatg
     1381 gataccggag ccatcgccag ccggacgacc tatgtcaccg gtaatgcaat caagctggcg
     1441 gcggaaaacg ccaagcagat attgtttgaa gtggcagcgc cgatgttgga tgtccggccc
     1501 gatcagctag aagcaattga ccgaaaaatt caggtcaaat actttccgca acgctgcctg
     1561 ccaattgcag atgttgcgct gcaggcgcaa tttgtcatgg gccgcccggc gattggttct
     1621 gcgtcttata atccgccaac cgtcgcgatg aattcggaaa ccggccaagg taaaccgttc
     1681 tccacttacg tttatgcaac ccaatgcgcc gaagttgaag tcgatgacga aaccggcgag
     1741 gttgatgtca tctatatgtc agccgcgcat gattgcggca cggcgatcaa tccgatgctg
     1801 gttgaaggcc agattgaggg gggcatttcc atgggtattg gctatgctct acaagaggaa
     1861 atgctgtttg atgatgaggg taaacaaatc aatcctaatt tgaccaacta cattatgcca
     1921 accagcttgg atatgcccga gatcaatgtc gatatcgttg aaaacttcga tccgaccggg
     1981 ccgttcggcg ccaaaggtgt tggtgagcca acagcagtgc cgactgctgc ggcgatttgt
     2041 aacgccatcc acgatgcagt tgacgttaga ataacctcct tgccggcgac agctgaaaaa
     2101 gtgctgaagg cgatcaaaga aaaaaatggg ccacaaatag gggaagagca gaaagcgttg
     2161 ccagctgctg aataattgag ctaggttgtg taaagccccc tttttatgta ccattttgat
     2221 gtagagtctc cggcaccggc ggtctcatat ttaaagactg gtgaggccgg atatgattgt
     2281 actgtctgag ccagatatta atgacgatct gagcctgttt gatggtcgag aaccattcgg
     2341 cattgaggac ttcttttctg agcgtgccat taaagcgttc gttgtatcca ttctcccaag
     2401 gactgcc
//
LOCUS       DASCNL010000673         2080 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001381088, whole genome shotgun sequence.
ACCESSION   DASCNL010000673 DASCNL010000000
VERSION     DASCNL010000673.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2080)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2080)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2080
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001381088"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(70..1260)
                     /locus_tag="QF359_08980"
     CDS             complement(70..1260)
                     /locus_tag="QF359_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJO87081.1"
                     /translation="MSLKKASTALARFTVLDLTRVRSGPTAIRQLADWGANVIKVEMP
                     EKADKSLLGGPREGSDFQNLHRNKRSLTLNLKSDQGVEIFKKLVTNADVVVENFRPDV
                     KTRLGIDYDSLKALNPKLVYASISGFGQDGPYKDRPGFDQIAQGMGGLMSITGLPGQG
                     PVRAGIPIADLTAGLFCAQGIMIALLEREASGEGQWIQTSLLQAQAFMLDFQASRWLV
                     DQDVPDQAGNNHPTIIPMGVFETADGHMNIAAGGKAIWRRFCAATELTELLDHPDYAK
                     AADRSINRDALNKIIEAKTKLQTTDHWVQFLNDNGVPCGEINTIDQVFTNPQVKHLGL
                     AQKINSTERGEIELVGQPIDMSRTPSKLAEPPPTCGEHTDEVLADIGYSVEEIARLRE
                     AEII"
     gene            complement(1273..1797)
                     /locus_tag="QF359_08985"
     CDS             complement(1273..1797)
                     /locus_tag="QF359_08985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HJO87082.1"
                     /translation="MIYALGDFEPSYASDTHWIADSANLVGNIYIGAEANIWWNAVLR
                     GDNEPIVIGDRSNIQDGSVLHTDPGFPLTVDTNVTVGHMSMLHGCEIGDGSLIGIGST
                     VLNGARIGKNCLIGAHSLITEGKEIPDNSLVMGSPGKVIRELDAAQIAGLKENTDGYV
                     ERAKYYAKELRQIG"
BASE COUNT          480 a          568 c          514 g          518 t
ORIGIN      
        1 caaaaaatgc cgggccgccg ttgaattttt aaccaacaca gcttgtacgg ttcattctgg
       61 acggttaggc taaatgatct cagcctcccg caaccgggca atttcctcaa cgctatagcc
      121 aatatcagcg agcacttcat cggtatgctc accacaagtt ggcggtggtt cagccagctt
      181 gctcggggtc cggctcatat caatcggctg gccgaccagt tcgatctcac cgcgctcggt
      241 cgagttaatt ttctgtgcaa ggccgagatg cttcacctgc ggattggtaa acacttgatc
      301 gatggtgttg atctcgccgc agggcacgcc gttgtcattt agaaattgca cccaatgatc
      361 ggttgtttgc agtttggtct tagcttcgat gattttgttt aaggcatcgc ggttgattga
      421 gcgatcagct gccttggcat aatccggatg gtcaagcagt tcggttagtt ccgtcgccgc
      481 gcagaaccgc cgccagatcg ctttcccacc agcggcaata ttcatatgtc cgtcagcggt
      541 ctcaaacacg cccatgggaa taattgttgg gtgattattg ccggcctgat cgggcacgtc
      601 ctggtcaacc agccagcgcg aagcctgaaa atccagcatg aaggcttgcg cttgcaacag
      661 ggaggtttga atccactggc cctcgccgga ggcttcgcgc tctaacaacg caatcatgat
      721 gccttgggcg caaaacagcc cggcagtcag atcggcgata gggatgccgg cccgcaccgg
      781 cccttggccg ggcaaaccgg tgatcgacat cagcccgccc ataccctggg cgatttgatc
      841 gaagccgggc cggtctttat aggggccatc ctgaccaaag ccggatatgc tggcataaac
      901 caatttcggg tttaaggctt tcaaactatc atagtcgata ccgaggcgtg ttttgacatc
      961 aggccgaaaa ttttcaacga cgacatctgc attggtgacc agctttttaa atatctcaac
     1021 gccctgatct gatttgagat ttagggtgag gctgcgttta ttgcgatgga gattctgaaa
     1081 atcggacccc tcacgcgggc cacccaagag agacttatcc gccttctccg gcatttctac
     1141 cttgatgacg ttggcgcccc aatcggcgag ctggcggatg gccgttggac cagaacgcac
     1201 ccgggtgaga tctagtacgg taaaccgcgc aagagccgtg ctcgcttttt taagagacat
     1261 cattacctcc atttacccaa tttggcgcaa ttccttagcg tagtatttag cccgctcgac
     1321 atagccgtcg gtattttctt ttaaacctgc aatctgtgca gcatccagct cgcgaatgac
     1381 cttgccgggt gagcccatga ccagtgaatt atcaggaatt tctttacctt cggtgatcag
     1441 tgaatgcgca ccaatcagac agtttttacc tatcctggca ccgttcagca ccgtgctgcc
     1501 aataccgatc aaggagccat caccgatctc gcagccatgc agcatggaca tatgaccaac
     1561 cgtgacattg gtgtcgacgg ttaagggaaa gccgggatcg gtatgcagta cgctgccgtc
     1621 ctgaatgttc gagcgatcgc caataacgat cggttcgtta tcgccgcgca acaccgcgtt
     1681 ccaccagata ttggcttccg ccccaatgta aatgttaccc accagattag cgctgtcagc
     1741 gatccaatgg gtgtcgctgg catagcttgg ttcaaaatcg ccgagggcat aaatcatcgt
     1801 attactccat tttctaaaac gtaatttttt gtgactgtag cggagaaggg agggcgagtc
     1861 ccgcctccaa tttgccttta atcaggaatt cttgtctttc tgtgccacct taaaatcttt
     1921 ataagattga gcataacgac aacaaaaata gaactattct gggaactgaa ctaaatgacc
     1981 caagctgaaa caccggccca acccccggat caatctccaa aatcctttgc tgctcttcgc
     2041 catccgggat tccgcgcttt ttttgtttgc gccgcactgg
//
LOCUS       DASCNL010000674         2860 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001381535, whole genome shotgun sequence.
ACCESSION   DASCNL010000674 DASCNL010000000
VERSION     DASCNL010000674.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001381535"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..691
                     /locus_tag="QF359_08990"
     CDS             <1..691
                     /locus_tag="QF359_08990"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO87083.1"
                     /translation="EGLGCVAMWRDFPEKLCQELGLNGFVYSRQGYGASDPIPLPRPV
                     EYMHHEGLNVVSPVLDAAGISSAILIGHSNGGSIAIIHAGAVKDPRVKAIILIAAHIF
                     NEEVTVNSIAKAKIAYETTDLRQGLTKYHGDNVDCAFRGWNDIWLHADFWHWNIEEFL
                     PGINVPSLVMQGADDQYGSIAQVNAIEAGLNCLTETVIIEGAKHSAHLDQPAATIKAI
                     TNFIDQHGVSE"
     gene            774..1244
                     /locus_tag="QF359_08995"
     CDS             774..1244
                     /locus_tag="QF359_08995"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJO87084.1"
                     /translation="MNDIDPTKPFSIKRPIRFTHTDPAGYVFFPRYFEMFQAVVEDWF
                     TKRLDTNFADMILVQGIGQPTAQLDCQFVKPCRLGESIEMAIVLEKFGTSSFELRFLG
                     TVEREVRLRAHSVQVLISMETGRPTPFSDHLRAELEAYHRQVIPPENLLDEVRR"
     gene            complement(1296..>2860)
                     /locus_tag="QF359_09000"
     CDS             complement(1296..>2860)
                     /locus_tag="QF359_09000"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87085.1"
                     /translation="SRAELWLQIRPGTDGALALGMLNVIINENLYDKEFVEKWTHGFE
                     ELKQRVQDYPLAKVSEITWIPTEDIVKAAHMYAKANPGAIRFGQPLDSNAQATATMHA
                     LNCLWAITGNTDIPGGNIICRPPYGVSLYPYSTEEVIQLYGEELVNNLNKKRIGADKF
                     PLVKNFRAWALADTVLEQMESGDPYPIKGLWLYTNNFMAGTAQDPRRHYEAVKKLNFN
                     VVVDNFMTPTASAIADIVLPGQTMAEKDSVFTTGVILNAMHGPLKIGDTKSGWDVAFE
                     MGKRLNPQAVPWDTLQDLFTERLRPAGVTFNELVENNGMLTPKDHISGGRPYRRHEKG
                     QLRPDGEPGFRTPTGKIELYSTKFEEYGLDPLPFHEEPVESPISTPEIFKEYPLIMIT
                     GRRNPTYYHSEHRQIPWLRQFDGEPYVELHQETAAELGVEDGEWVWIEGVRGKVKRKL
                     RTTPVVHRQMAMAPHGWWYPEKENKAPILNGIWDINLNQLIPMGHQGKSGFGGAPLKT
                     MLCKIYPMEKVS"
BASE COUNT          701 a          727 c          709 g          723 t
ORIGIN      
        1 tgaaggattg ggctgtgttg cgatgtggcg cgattttccg gaaaaactct gccaggaatt
       61 agggctgaat ggttttgttt atagccgcca aggctatggc gcctccgatc cgatcccgct
      121 gccgcgaccg gtagagtata tgcaccatga aggattgaac gtggtgtctc cggtgcttga
      181 tgcggcgggt atctcttcgg ccattttgat cggtcatagc aacggcggtt cgattgcgat
      241 tattcatgcc ggcgcggtta aagacccgcg ggttaaagct atcatcttaa tagccgccca
      301 tatttttaat gaagaagtca ccgtgaatag tatcgccaag gccaagattg cctatgaaac
      361 aacagatttg cggcaaggcc tcaccaaata tcatggtgac aatgtcgact gcgcttttcg
      421 cggctggaat gacatttggc tccatgcgga tttctggcat tggaatatcg aagagttttt
      481 acccggcatc aacgttccct cactcgttat gcagggagct gatgatcaat atggctcgat
      541 tgctcaagtt aatgcgattg aagccggctt aaattgccta accgaaacag ttataatcga
      601 aggtgccaaa cactcagcgc atttggatca accagctgca acgatcaagg cgataaccaa
      661 ttttattgac cagcacggtg tttccgaata ggtcaataac ctagggacat gcaaaaaagt
      721 cgcaatactt gagaacataa aatcaattcg cggcactagt gtaggattaa agaatgaatg
      781 atatcgaccc aaccaaacca ttttcaatca agagacccat cagattcacc catacggacc
      841 cggccggata tgtttttttc ccgcgttatt ttgaaatgtt tcaagccgtt gtcgaagatt
      901 ggttcaccaa acggctcgac acaaattttg ctgacatgat cctggtccaa ggaattggcc
      961 aacccactgc gcaacttgac tgccaatttg tgaaaccctg ccgtttgggg gaatcgatag
     1021 aaatggcaat cgttctggaa aaattcggca cctcttcttt tgagcttagg tttctcggta
     1081 ccgttgaaag agaagtccgc ctgcgtgccc attcagttca agttctgatc agcatggaaa
     1141 ccggacgccc aactccgttc tcggatcacc taagggctga gcttgaagct taccatagac
     1201 aggtaatacc gcctgaaaat ctgcttgacg aagtacggcg ttaatccacc ccgtcgacaa
     1261 tcgataaagt cgattcaatt ttattgctaa gcactctaag agactttctc catcggataa
     1321 attttgcaca gcatggtctt gagtggcgcg ccgccaaagc cggatttacc ttgatgaccc
     1381 attgggatca attggttgag gttgatatcc caaatgccat tgagaatcgg cgctttgttt
     1441 tccttttccg gataccacca accatgcggc gccatcgcca tttgccggtg caccaccggc
     1501 gtagttctga gcttgcgttt gaccttgccg cgtacgcctt cgatccagac ccattcgcca
     1561 tcctcaacgc caagttcggc agcagtttcc tgatgcaact cgacataggg ctccccgtca
     1621 aactgccgca gccaggggat ttgccggtgc tcactatggt aataagtcgg attgcgtcgc
     1681 ccggttatca tgatcagcgg atactctttg aatatctccg gtgtgctaat cgggctttca
     1741 acgggttctt cgtggaaagg cagcgggtcg aggccatatt cctcgaactt ggtcgaataa
     1801 agttcgatct taccggtcgg tgtacggaaa ccgggttcac catccggccg cagctgacct
     1861 ttttcatgac ggcggtaggg tctgccaccg gaaatgtgat cctttggcgt cagcatacca
     1921 ttattttcaa ccaattcatt gaaggtgacc cccgccgggc gcaagcgttc ggtaaacaga
     1981 tcctgtagcg tatcccacgg taccgcctgc ggattgagcc gtttgcccat ttcaaaggca
     2041 acatcccagc cagacttggt atcgccgatt ttaagcggcc catgcatggc gttaagaata
     2101 acaccggtgg taaaaacaga atctttttcc gccatggtct ggccgggtaa tacgatatcg
     2161 gcaatagccg aggcagtcgg tgtcatgaag ttatcgacaa cgacattgaa attgagtttc
     2221 ttaaccgctt cataatgtcg cctcgggtcc tgtgccgtgc cggccatgaa attgttggtg
     2281 tagagccaga gtcccttgat cggataaggg tcaccggact ccatctgctc aagcactgta
     2341 tcggccagcg cccaggcgcg gaaattcttc accagtggga acttgtcagc gccgatacgt
     2401 tttttattga ggttattgac taactcctca ccataaagct ggatcacttc ctcggtcgaa
     2461 tacggataaa gcgacacgcc ataaggcggg cggcagataa tgttaccacc gggaatatcc
     2521 gtattgccgg taatcgccca cagacagttg agcgcatgca tggtagcagt ggcttgagcg
     2581 ttggaatcca atggctggcc aaaccggatg gcgcctggat tggccttggc atacatgtgg
     2641 gcagccttga caatatcttc cgtcggaatc caggtaatct cagaaacctt ggccagtgga
     2701 tagtcctgca cccgttgttt aagttcctca aaaccgtggg tccatttttc aacgaattcc
     2761 ttatcgtaga ggttctcgtt aataataaca ttgagcatac cgagcgccag cgcaccatcg
     2821 gtgccaggac ggatttgcaa ccacaactca gcccgggacg
//
LOCUS       DASCNL010000675         3106 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001383192, whole genome shotgun sequence.
ACCESSION   DASCNL010000675 DASCNL010000000
VERSION     DASCNL010000675.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3106)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3106)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001383192"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="QF359_09005"
     CDS             complement(<1..217)
                     /locus_tag="QF359_09005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HJO87086.1"
                     /translation="MLKIRIIPCLDVDKGRVVKGVNFVDLVDAGDPVEQAKVYDAAGA
                     DELTFLDITASHEDRETIFDVVAQTAEQ"
     gene            complement(210..947)
                     /gene="hisA"
                     /locus_tag="QF359_09010"
     CDS             complement(210..947)
                     /gene="hisA"
                     /locus_tag="QF359_09010"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HJO87087.1"
                     /translation="MIFFPAIDLKDGQCVRLLRGEMDQTTVFGDDPAAQALLFQEAGC
                     TWLHVVDLNGAFVGEPVNGTAVDGILEVTTMKVELGGGIRDLATIETWLKKGITRVIL
                     GTVALKNPDLVKQACRVFPDQVAVGIDAKGGFVAVEGWAEVSEITALDLARKFEDAGV
                     TAIIYTDIDRDGLMTGPNTEATIRLAKAISIPVIVSGGVSSMADLQALKDAGGDLLEG
                     VISGRAVYDGAIDPTQAIALLQEDNDA"
     gene            complement(944..1579)
                     /gene="hisH"
                     /locus_tag="QF359_09015"
     CDS             complement(944..1579)
                     /gene="hisH"
                     /locus_tag="QF359_09015"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HJO87088.1"
                     /translation="MTVIIDYGSGNLRSVAKAFEHARVEDVLVSNDPAALKDASHIVL
                     PGVGAFADCKAGLEAVPGMIEALEEQVINAKKPFLGICVGMQLMATLGREHGETAGFD
                     WIGGEVVEIKPNDATLKIPHIGWNALEFVAGVHPVLQGFETGVHAYFVHSYHFAAANS
                     ENVLASVDYGGKVTAIVGRDNMIGTQFHPEKSQQFGLAFIENFLKWDGQPA"
     gene            complement(1597..2010)
                     /locus_tag="QF359_09020"
     CDS             complement(1597..2010)
                     /locus_tag="QF359_09020"
                     /inference="COORDINATES: protein motif:HMM:NF022400.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HJO87089.1"
                     /translation="MRIYTLHQPSKSKNAAAEAVPVKEGFSWPGFFFSVIWALWYRLW
                     FWAIAFAVANIVLGWVLARAGGNEFVQSTTSLALALIIGWTANDLRRRKLAKQGFKER
                     AVMVANNKETALARYRMAQPAAPAVDFMNRAGGPW"
     gene            complement(2023..2646)
                     /gene="hisB"
                     /locus_tag="QF359_09025"
     CDS             complement(2023..2646)
                     /gene="hisB"
                     /locus_tag="QF359_09025"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014746873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HJO87090.1"
                     /translation="MGTLNSPNDRIASVERNTNETRISVSVNLDGTGAYNVSTGIGFL
                     DHMLEQLSRHSLMDLDVKAEGDTHIDFHHSTEDTGIAIGEAVKQALGDRAGITRFGVA
                     HCPLDEALTRAVVDCSNRPSLTWKVGFSRPKVGEFDTELFREWFQAFAQSAGLTLHVE
                     NFYGENDHHIIESSYKALARALRQAITIDERAVDSVPSTKGTLSDNK"
     gene            2851..>3106
                     /locus_tag="QF359_09030"
     CDS             2851..>3106
                     /locus_tag="QF359_09030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase proteolytic subunit"
                     /protein_id="HJO87091.1"
                     /translation="MADTNSHDSNYPNWHATTILCVRKGSDVVVAGDGQVSMGDTVVK
                     ANAMKVRRLHNDTVITGFAGATADAFTLFERLEAKLDQHPG"
BASE COUNT          791 a          888 c          730 g          697 t
ORIGIN      
        1 attgctcggc tgtctgcgca acaacgtcaa agatcgtctc gcggtcttcg tggctcgccg
       61 taatatccaa aaaggtaagc tcgtcagccc cggcagcatc ataaaccttg gcctgctcga
      121 ccggatcacc ggcatcgacg agatcaacaa agttaacgcc tttaacaaca cggcctttat
      181 caacatcgag gcaaggtata atgcgaattt taagcatcat tatcttcctg cagcaaagca
      241 atggcttggg ttggatctat ggcgccatca taaacggccc ggcccgaaat cacaccttca
      301 agcaaatcgc cacccgcatc cttaagcgcc tgcagatctg ccatcgatga cacaccgcct
      361 gacacaatca ccggaataga aatcgccttg gcgagcctga tcgtcgcttc ggtgttggga
      421 ccggtcatta aaccgtcccg gtcaatatcg gtatagatga ttgccgtcac cccagcatct
      481 tcaaattttc gcgccagatc gagagccgtg atttccgaaa cttcggccca gccttcgaca
      541 gcgacaaagc cgcctttggc atcaatacca acagccactt gatccgggaa tacccggcag
      601 gcctgtttaa ccaggtctgg gtttttaagt gcgaccgtac cgagaatcac acgcgtgatg
      661 cctttcttca gccaggtttc gatggttgcc agatcacgga tgccgccacc aagctcaact
      721 ttcatggtgg ttacttcaag aatgccatcg acggcggtgc cattaaccgg ctccccgaca
      781 aaggcgccgt tgagatcaac cacatgcaac caggtgcagc cggcttcctg gaacaacaag
      841 gcttgcgctg ccggatcatc accaaacacg gttgtttgat ccatctcacc ccggagcaag
      901 cggacacatt gtccgtcttt gagatcaatg gcggggaaaa agatcatgct ggttgtccgt
      961 cccactttaa aaaattttcg ataaaggcca agccgaactg ctgacttttt tccggatgaa
     1021 actgagtgcc gatcatattg tcacgaccga ctatcgccgt cactttcccg ccatagtcga
     1081 cgctcgccaa aacgttctcc gaattagccg cggcaaaatg ataggaatga acaaaatacg
     1141 catgtacacc ggtctcaaag ccctgcagca ccggatgcac acccgcaacg aattcaagcg
     1201 cgttccaacc tatgtgaggg atttttaaag tagcgtcatt gggtttgatc tcaacaactt
     1261 caccaccaat ccagtcaaag ccagccgtct caccatgttc acggccgagc gttgccatca
     1321 attgcatacc aacgcaaata cctagaaaag gttttttggc attgatcacc tgttcttcaa
     1381 gcgcctcgat catgcccggc accgcttcga gccccgcttt gcaatcagca aaggcgccga
     1441 cacccggcaa cacaatgtgg ctggcatcct tgagcgccgc cggatcattg ctcaccagaa
     1501 cgtcttcaac tctggcatgt tcaaaggctt tggccaccga gcgtaaattg ccggagccat
     1561 aatcaataat aacagtcatt ttatttatct gggccattac cacggccctc cagcacgatt
     1621 cataaaatct actgccggcg ctgccggttg tgccatccga taacgggcga gggcggtttc
     1681 tttattgttc gccaccatca ctgcgcgttc tttaaagcct tgcttggcca atttgcggcg
     1741 gcggaggtca ttagccgtcc agccgataat caacgccagg gctaaagatg tggtcgattg
     1801 cacgaactca ttgccgcctg cccgcgccaa gacccagccc agcacaatat tagcaacggc
     1861 aaaagcgatt gcccagaacc ataggcggta ccagagagcc cagatcaccg agaagaaaaa
     1921 gcccggccag ctgaaacctt ctttaaccgg cacagcttcg gctgccgcgt ttttgctttt
     1981 tgacggctgg tgtaaggtat aaatgcgcat ggcttgaaac ttctatttgt tgtccgacaa
     2041 ggtacccttg gtcgatggca cggaatcaac agcccgctcg tcaatcgtta tggcctgacg
     2101 aagtgcccgg gcgagcgctt tatagctcga ttcaataata tggtgatcgt tctcaccata
     2161 aaaattttcg acatgcaaag tcaggcctgc tgactgagca aaggcctgaa accattcgcg
     2221 aaatagttcg gtatcaaact caccgacttt gggacgtgag aaaccaactt tccaagtcag
     2281 gctgggccgg tttgaacaat caaccaccgc gcgggtcaag gcttcgtcca acggacaatg
     2341 agcgacgcca aaacgggtga tgccggcccg gtcaccaagc gcctgcttga ccgcttcacc
     2401 aatggcaatg ccggtgtctt cggtggagtg gtgaaaatca atgtgagtat cgccctcggc
     2461 tttgacgtct agatccatca aactgtgacg ggacagctgc tccaacatgt gatcgagaaa
     2521 accgatcccg gttgaaacat tgtatgcgcc ggtgccgtca agattgacgg acacgctgat
     2581 ccgcgtttca ttcgtattgc gctcaacgct ggcaatacgg tcatttgggc tgtttaaagt
     2641 gcccatttta cctactccaa ttgatttcct taagtaaagt cgcgctcttg taacaggaac
     2701 aaaggatttt agctagattt ttacaataaa tcgtaaatat cctggccaag ccctcctgta
     2761 ccggggctcc cgaattccag aaccattgac tgcaagccat ttagaaacta catcccccta
     2821 acagactgaa tcctgaaaag gttaaaaacc atggccgaca ccaacagcca cgatagcaat
     2881 tacccaaact ggcatgcaac gaccatcttg tgtgtccgca aaggcagcga tgtcgtggta
     2941 gccggcgatg gccaggtcag catgggtgac accgttgtaa aagccaatgc gatgaaagtg
     3001 cgccgcctcc acaatgacac ggtaattacc ggttttgccg gcgcgaccgc cgatgctttt
     3061 acgctgtttg aacggcttga agccaagctc gatcaacacc ccggtc
//
LOCUS       DASCNL010000676         1372 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001383454, whole genome shotgun sequence.
ACCESSION   DASCNL010000676 DASCNL010000000
VERSION     DASCNL010000676.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1372)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1372)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001383454"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="QF359_09035"
     CDS             <1..540
                     /locus_tag="QF359_09035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87092.1"
                     /translation="EYMNSTGIEGVDPFSKTIKTDFDDIKFEGGAIYPRTRAARMIER
                     FDLNDPTSPQKEARIDQFDYNFVGDERIYVTGDCRPMPFSKSASVAISEAKHVAKVIA
                     TRLRGREVKWVTPESVCYSMVNTQPREAILSHSFYRFDENSKQWAFDPRSKPYNNRSE
                     RLGAETYLWGKTHFREIFG"
     gene            626..1285
                     /locus_tag="QF359_09040"
     CDS             626..1285
                     /locus_tag="QF359_09040"
                     /inference="COORDINATES: protein motif:HMM:NF024498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HJO87093.1"
                     /translation="MNKSKFISLLVILVFVLFTITQPVEAKGKKMPKPVVNEDGLHEQ
                     KWFHDSFLDLKEDLEEAKASGKRLVLIWEQKGCPYCKRTHEVNFRIPKIVKFITDNFV
                     VIQMNLWGDKEVTDFDGEVTIEKKLSQKWAVRFTPTIQFFPDDPKSIGKKSGNAVEVM
                     RIPGYFKPFHFYFLFKYVKAKAYKTEPNFQRWLGLEGDKLAEKGYDIQKLLWADDLLI
                     D"
BASE COUNT          394 a          283 c          334 g          361 t
ORIGIN      
        1 gagtatatga actcgacggg gattgaaggc gttgatccgt tcagtaaaac aataaaaacg
       61 gattttgatg acatcaagtt tgagggcggg gcgatctatc cgcgcacgcg tgctgcccgc
      121 atgatagaac gctttgactt gaacgatcct acgagcccgc aaaaagaagc taggatcgat
      181 caatttgact acaatttcgt tggcgatgag cgaatttatg tcactggtga ttgtcgcccg
      241 atgccgtttt ccaaaagcgc tagtgttgcc attagtgaag ccaagcatgt tgccaaagtt
      301 atcgctacgc gcttacgggg gcgcgaggtg aaatgggtga cgccggaatc cgtttgctat
      361 tcgatggtca acactcagcc gcgggaagcg atactttcgc actcgtttta ccgctttgat
      421 gaaaacagca agcaatgggc cttcgatccg cggtcaaaac cctataataa tcgcagtgag
      481 agacttggtg ccgagactta cctctggggt aaaacacatt tccgtgagat attcggctaa
      541 atttaaggtt ttactaaatt aacaattaca atttacacga aattttgtaa aataagcttc
      601 tcgggaagtt gcggaggaat taactgtgaa taagtctaag tttatcagtc tgttggtaat
      661 tttagtattc gtgttattta ccattacgca gccggtcgaa gccaagggta aaaagatgcc
      721 caaaccggta gttaacgaag atggcctgca tgagcaaaaa tggttccatg atagttttct
      781 tgatctcaag gaagacctgg aagaggccaa agccagcggc aaacgcttgg tgcttatttg
      841 ggagcaaaaa ggttgtcctt attgcaaacg cacccatgaa gttaatttcc gcattccaaa
      901 aatcgttaaa tttatcaccg ataattttgt cgttattcaa atgaatttat ggggcgataa
      961 agaagttacc gactttgacg gtgaagtgac gatagaaaaa aaactgtcgc aaaaatgggc
     1021 cgtgcgtttt accccgacca ttcagttctt tcccgatgat cccaaatcga tcggcaagaa
     1081 aagtggtaat gctgtagagg tgatgcggat acccggctac ttcaaaccgt ttcattttta
     1141 cttcttgttc aaatatgtca aagctaaagc gtataaaact gaacccaact ttcagcgttg
     1201 gcttgggctt gaaggtgata agctcgccga aaaaggttac gacatccaaa aactgctctg
     1261 ggcggacgat ctgctgattg actagccgaa ttttgtaaat actggaaccg tctcaagcag
     1321 ccaatttgct gcttcggcga gatcgccggt aaagacggcg atgccggtga tg
//
LOCUS       DASCNL010000677         2497 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001384877, whole genome shotgun sequence.
ACCESSION   DASCNL010000677 DASCNL010000000
VERSION     DASCNL010000677.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001384877"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>2497
                     /gene="metH"
                     /locus_tag="QF359_09045"
     CDS             <1..>2497
                     /gene="metH"
                     /locus_tag="QF359_09045"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008332965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HJO87094.1"
                     /translation="TDIIETNTFNATTISQADYGLEDIVHELNFEAARIAKEAAAAAA
                     KKDGRVIYVAGVLGPTNRTASISPDVNDPGFRNISFDELAEAYRQAAGALIDGGADIL
                     LVETIFDTLNAKAALYAVMKLQKERGIDVPLMISGTITDSSGRTLTGQTPEAFWNSVA
                     HAKQLIIGLNCALGTADLRPHIQALAGIAPTFVSLHPNAGLPNAFGGYDDTPEYMAAM
                     LNEFAASGFLNVVGGCCGTTPDHVRAIAESVQGMTPRELPNLTRHGRLSGLEPLNIDE
                     VTGFINVGERTNVAGSARFRKLIMEEDYETALDVARQQVENGAQIIDVNMDEAMLDAE
                     AAMDRFLKLVASEPDICRVPVMIDSSKWSVIEAGLKCVQGKGVVNSISLKEGEGAFKI
                     QAQEILYYGAAAIVMAFDEQGQADSYERMIEICEKSYRILTEEVGFPPQDIIFDPNIF
                     PVATGIEEHRNFSKAYIDAVKYIKENLPFANISGGLSNVSFSFRGNNAVREAIHAVFL
                     YHAVSAGMNMGIVNAGQLAVYADIELDLRERIEDIILNRREDATERLLEVADQAQDQA
                     KEKAEDLSWREGSIGERMAHALVKGITEYIVEDTEEARQQFDRPIEVIEGPLMDGMNL
                     VGDLFGSGQMFLPQVVKSARVMKQAVAHLVPFIEAEKEASGVIESKGKILLATVKGDV
                     HDIGKNIVGVVLQCNNYDVVDIGMMVPYEKIIEAAKAEKVDIIGLSGLITPSLEEMAV
                     VAKELSRDKFDIPLLIGGATTSKVHTAVKIAPNYQGSTIYVTDASRAVGVASNLLSDT
                     LRDQDVAEVGREYDKIREEFGGRDRSDNLTAIA"
BASE COUNT          631 a          588 c          683 g          595 t
ORIGIN      
        1 gtaccgatat cattgagacc aatacattta atgcgacaac aatttcgcaa gctgattatg
       61 gtctcgaaga tattgtccat gaattaaact ttgaagcagc ccggattgct aaggaggcgg
      121 cagcggcagc ggccaaaaaa gacgggcggg tgatttacgt cgccggtgtt ttaggcccaa
      181 ccaatcgaac agcttcaatc tcgccggatg tcaatgatcc aggatttcgg aatatttctt
      241 tcgatgaatt ggccgaagct tacaggcaag ctgccggggc actcatcgat ggcggtgcag
      301 acatcctgct ggtcgaaacg atttttgata cgttgaatgc taaggcggcg ctttatgcgg
      361 tgatgaagct gcaaaaagaa cgcgggattg atgtgccact gatgatctcc ggcaccatca
      421 ccgactcatc tggccggaca ctcaccggtc aaacaccaga agcgttctgg aactcggtcg
      481 cccatgccaa acagctgatt ataggactaa actgtgcatt ggggacggcc gatttgcgcc
      541 cccatattca agcccttgct gggattgctc cgacctttgt cagtctgcat ccaaatgccg
      601 gcctgccgaa cgccttcggc ggctatgatg atacgcctga gtatatggcg gcaatgctca
      661 atgaatttgc tgccagcggc ttcttaaatg tcgtcggcgg ctgttgtggc acgacgcccg
      721 atcatgtgcg cgccattgct gagagcgtcc aaggaatgac gccgcgtgag ctgccaaatc
      781 tcacccggca cggtcgcctc agtggcttgg agcccttgaa cattgatgag gttaccggct
      841 tcatcaatgt cggcgagcgg accaatgttg ccggctcggc gcggtttaga aagctgatta
      901 tggaagagga ttatgaaacc gccctcgatg ttgcccgtca acaggtcgaa aacggtgccc
      961 agatcatcga tgtcaatatg gatgaagcga tgctcgatgc cgaagcggcg atggatcgat
     1021 tcttaaaatt agtcgcctct gaaccagata tctgccgggt accggtgatg atcgatagtt
     1081 ctaaatggtc ggtcatcgaa gccggtctca aatgtgtgca aggcaagggc gtagttaatt
     1141 caatcagcct caaggagggt gaaggcgcct ttaaaatcca agcgcaagaa atcctttatt
     1201 acggagcggc cgccattgtc atggcgtttg atgagcaagg ccaggccgac agttatgagc
     1261 ggatgatcga aatttgcgag aaatcctatc gcattttgac cgaagaggtg ggctttccac
     1321 cacaggatat catttttgat cccaatattt ttcccgttgc gacgggcatt gaggaacatc
     1381 gcaatttttc caaagcctat attgatgcgg ttaaatatat taaagaaaat ctgccgtttg
     1441 ccaatatcag tggcgggctc agcaatgtct ctttttcctt ccgcggcaat aatgcggtcc
     1501 gtgaagctat acacgcggtg tttctttatc acgccgtcag tgccggcatg aatatgggca
     1561 ttgttaatgc cggtcaactc gccgtctacg ccgatattga gctggactta agagagcgca
     1621 tcgaagacat catcctcaac cgccgtgaag atgccaccga acgactgctg gaggtcgctg
     1681 accaggcgca agaccaagcc aaagaaaaag ccgaagattt atcctggcgt gagggctcaa
     1741 tcggtgaacg tatggcacac gctctggtta aaggcattac cgaatacatt gttgaagaca
     1801 ctgaagaggc acgccagcaa tttgaccggc cgattgaagt tatcgaaggg ccgttgatgg
     1861 atggtatgaa tttggtcggt gatttgtttg gctccggcca gatgttcctg ccgcaggtgg
     1921 tcaaatccgc ccgggtgatg aagcaggcgg tagcccatct ggtgcccttc attgaagctg
     1981 aaaaagaagc cagcggcgtt atcgagagca agggtaagat tttactggcg acggtgaagg
     2041 gcgatgtcca tgacatcggc aaaaacattg ttggtgttgt attacaatgt aacaattacg
     2101 atgtcgtcga tatcggaatg atggtgcctt atgagaaaat tattgaagct gctaaggcag
     2161 aaaaagtcga tatcattggc ttgtccggct taatcacgcc gtcgctggaa gaaatggcag
     2221 tggttgccaa agagctatcc cgcgataaat ttgacattcc gttgctgatt ggtggggcga
     2281 caacatcaaa agtgcatacg gcggtcaaga ttgcccctaa ttatcaaggt tcgaccattt
     2341 atgtcaccga tgcgtcgcgt gcggtcggcg ttgccagcaa tcttctgagc gataccttac
     2401 gcgatcaaga tgtagcggaa gtcggccggg aatacgataa aattcgcgaa gaatttggag
     2461 gccgtgaccg cagtgataat ctcaccgcca ttgcaga
//
LOCUS       DASCNL010000678         5364 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001384992, whole genome shotgun sequence.
ACCESSION   DASCNL010000678 DASCNL010000000
VERSION     DASCNL010000678.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5364)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5364)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5364
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001384992"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1282
                     /gene="gcvPA"
                     /locus_tag="QF359_09050"
     CDS             <1..1282
                     /gene="gcvPA"
                     /locus_tag="QF359_09050"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HJO87095.1"
                     /translation="DMAALYKDVATEVLLDQPVDLPSVKGELEVEQIISGLAAKNLGS
                     GAAPFFLGAGNYSHHIPAATDHLIQRSEFLTSYTPYQPEVSQGTLQALFEFQTQVAMI
                     TGMEIANASLYDGATAAAEAAMMACRITRRNKVILSGGLHPHYAEVTATNAKFLTIDI
                     VTNPADPLAQEDFSAQIDDKTACVIVQNPGFFGQVRNHSELAVACHNKGALLVVVVTE
                     IVSLGAVLSPGDMGADIVAAEGQSLGNALNFGGPHVGLFAVRKKYLRQMPGRLVGETE
                     DVGGKRGWVLTLSTREQHIRREKATSNICTNSGLCALAFSIHLTLLGEAGFTRLAQLN
                     HATAIALADKLNAIKGVEVINDTFFNEFTLRLNQPAAGVVDALAANNLLAGLPASRLY
                     PSDKALENLLLVAATETVTPTDMDQLVGALEEAL"
     gene            1282..2790
                     /gene="gcvPB"
                     /locus_tag="QF359_09055"
     CDS             1282..2790
                     /gene="gcvPB"
                     /locus_tag="QF359_09055"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HJO87096.1"
                     /translation="MEMATGNRALQLEEKLIFEQNSPGMTAVDLPNPAELTNVKSRLG
                     DAARKDPIGLPGLSEPQVVRHYLRLSQKNFAIDGGFYPLGSCTMKHNPRLNEKMARLP
                     GIADIHPLQPKATVQGAYELLDMTAHWLKVLTGMPAVAMSPAAGAHGELCGLMTIRVA
                     LEARGDARQRVLVPESAHGTNPASAHMCGYKVEAIPATGQGRVDLQALKKKLGPDVAA
                     IMVTNPNTCGLFENEIIEITQAVHECGGLVYCDGANFNAIVGRVRPGDLGIDAMHLNL
                     HKTFSTPHGGGGPGAGPVVLSEALEAYAPLPYIVHGKDGFDMVEHVADAGNDQPFGRM
                     KGFHGQFGVIVRSLAYMLSMGAEGLRQASSDAVLNANYLMAELSDILTLSYDGPCMHE
                     VLFDDRFLKDTDVTTLDFAKAMIDEGFHPMTMYFPLVVHGALLMEPTETEGKATLDEF
                     IGVIRALAEKAQNGNADDFKAAPIYTPRRRLDETKAARTPVLIYQSEQAAAE"
     gene            3137..3985
                     /locus_tag="QF359_09060"
     CDS             3137..3985
                     /locus_tag="QF359_09060"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJO87097.1"
                     /translation="MILLEAINNQGENMTDTTSAIQTHYALNNLTDRILKALEVAGHD
                     TKNLTVGMLNLVDQLHGGGLNSTIAQARMVKIMENTQVFDAGCGVGGSSRYLAHTFGC
                     QIEAIDLTLEYIEAAARLNKLCGIDDKISVNQGSVTDIHQEDQSFDLVWCQNVTMNVR
                     DKTRMFAETYRVLVPGGQYTFSHLAGGPAGEPYYPLPWARDPAYSFLSTPEMIIQCLE
                     EVGFTNIENRSRTGGSGNAARQSTDDLAQSVILGEDMPERQTNAMRSRKEGRIIGMLV
                     TAERPA"
     gene            complement(4218..>5364)
                     /locus_tag="QF359_09065"
     CDS             complement(4218..>5364)
                     /locus_tag="QF359_09065"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HJO87098.1"
                     /translation="LDLAGKRVLLRVDMNVPMQDGVVTDPARIEKIVPTISEILTGGA
                     GIVLASHFGRPKGEVVPEMSLAPLAEVLSGYLVDTEVIFSADGAHVAQPGEIVLLENL
                     RFNAGEEGNDPDFAKNLAAHGDIYVNDAFSCAHRAHASIDGVARLLPAAAGRLMQQEL
                     ETLCSALESPIHPVAALVGGNKISTKLGVLENLITKVDHLIVGGAMANTFLFSAGLTV
                     GQSHSEEDMAETARTITAKAKETGCKIHLPIDAVVAGALEAGTATATVAIDAVPADQM
                     ILDVGPKTTAAISALLSDCNTLVWNGPLGAFEFEPFDRGTNATAQAAAKLTQTGSLLS
                     VAGGGDTMAALANAGVTETFSYISSAGGAFLEWLEGKTLPGIALLMG"
BASE COUNT         1289 a         1393 c         1452 g         1230 t
ORIGIN      
        1 agatatggcg gcgctctaca aagatgttgc caccgaggtt ttgcttgatc agccagttga
       61 tttgccgagc gtgaagggtg agctggaggt cgaacagatt atctcaggtt tggcggcaaa
      121 aaatctcggt tccggagcgg cacctttttt cctcggcgcc ggcaattact cccatcatat
      181 tccggccgcc accgatcatc ttatccagcg cagcgaattt ctgacctctt acacacccta
      241 ccagccggaa gtttcgcagg gtacgctcca agccttgttc gagtttcaaa ctcaggtcgc
      301 aatgattacc ggcatggaga ttgccaatgc ctcgctctat gacggcgcaa cggctgccgc
      361 cgaagcggcg atgatggcgt gccggataac ccggcggaac aaagttatct tatcgggcgg
      421 gctgcatccg cattatgcgg aagtcacggc caccaatgct aaatttctca ccatcgatat
      481 tgtcaccaat ccggctgatc ccttggctca agaagatttc tctgctcaaa tcgatgataa
      541 aaccgcctgc gtgatcgtgc aaaaccccgg cttttttggt caggtacgca atcattcaga
      601 attggctgtg gcatgccata acaaaggtgc cttgctggtc gtggtcgtca ccgagattgt
      661 gtcgctgggc gctgtcttgt cgcccggtga tatgggggcg gatattgtcg ctgccgaagg
      721 ccaatcgttg ggcaatgcgc tcaatttcgg cggaccccat gttgggctgt tcgcggtcag
      781 gaaaaaatat cttcgccaaa tgccaggccg cctagtcggg gaaaccgaag acgttggagg
      841 caagcgcggc tgggtgctga ctttgtcgac ccgggaacag catatccgcc gggagaaagc
      901 gaccagtaac atctgcacca actcaggcct ctgtgccttg gcgttctcga tccatctgac
      961 gctattgggt gaggcgggct ttacccgtct cgctcaactg aaccacgcga cggcaattgc
     1021 gcttgccgac aagcttaacg cgattaaagg cgttgaggtg atcaacgaca ctttttttaa
     1081 cgaatttacc ctgcgcctca accagccggc agcgggtgtg gttgatgccc tggcagcaaa
     1141 taacctattg gcaggtttgc ctgcttcgag actctatccc agtgacaaag cgcttgaaaa
     1201 tttgttgttg gtggcagcta cggagacagt aacaccaaca gatatggatc agttggttgg
     1261 tgcattagag gaggccctct gatggagatg gccaccggca accgcgcctt gcagcttgag
     1321 gaaaaactga tctttgagca aaactcaccg ggtatgacag cagtagattt accaaatcca
     1381 gcggaactta ccaatgtcaa aagccgcctc ggtgatgcgg cacggaaaga tcccatcggg
     1441 ctaccgggat tgtctgaacc gcaggtggtt aggcattatc tacgtctcag ccagaaaaat
     1501 tttgccattg atggcgggtt ttatcccttg ggctcctgca ccatgaagca taatccgagg
     1561 ctcaatgaaa agatggcacg cctacctggt atcgctgata ttcatccctt gcagccaaaa
     1621 gcaaccgtgc aaggtgccta tgagctgctc gatatgacgg cgcattggct gaaagtctta
     1681 accggtatgc cagccgtggc aatgtctccg gccgccggtg cgcatggtga gctctgtggc
     1741 ttgatgacca tccgggtggc tttagaggct agaggagatg cacgacagcg tgtgctggtg
     1801 ccggaatcag cccacggcac caacccggcg agtgcccata tgtgcggcta taaagttgaa
     1861 gccatcccgg cgaccgggca aggccgggtc gatctccaag ccctcaaaaa aaaacttgga
     1921 ccggatgtcg ccgcgatcat ggtgaccaat cccaacacct gcggcttatt tgaaaatgag
     1981 attatcgaaa taacccaggc ggtgcatgaa tgcggcggac ttgtctactg tgacggcgcc
     2041 aatttcaatg ccattgtcgg ccgggtcaga ccgggcgatc tcggtattga cgccatgcat
     2101 ctcaatttgc ataagacgtt ctcgacgccg catggcggcg gcgggccggg agccggacca
     2161 gtggtgctgt ccgaagcgct cgaagcctat gcgccgctgc cttatatcgt gcacggtaaa
     2221 gatggctttg atatggtcga acacgtggct gacgcaggca atgaccagcc gtttggccgg
     2281 atgaaaggct ttcacggcca gttcggcgtg attgtccgct cgctggctta tatgctgtcg
     2341 atgggtgcgg aaggcttgcg tcaggcctca agcgatgccg tgctcaatgc caattatctg
     2401 atggctgaac tcagcgatat tttaaccctg tcttacgatg ggccctgcat gcatgaagta
     2461 ctattcgatg accggttctt gaaagatacc gatgtcacca ctctcgattt cgccaaggca
     2521 atgatcgatg agggcttcca tccgatgact atgtatttcc cgctggttgt ccacggcgcg
     2581 ctgttgatgg agccgactga aaccgaaggc aaagcgaccc tcgatgagtt tatcggtgtt
     2641 atccgggcgc tggccgagaa agcgcagaac ggcaatgccg atgattttaa agcagcgccg
     2701 atatatacgc cgcgccgccg ccttgatgaa accaaggctg cccgcacccc ggtgcttatt
     2761 tatcaatcgg aacaggccgc cgccgagtag ccgttagcta cttgcaagta ctggcagtta
     2821 tgccgcatcc atctttaaga cgcccattca ccacagagcg cacagaatac gcaaagttac
     2881 taattttgct tcgcgttctt tgagtgcttc gtggtttgat ttgttgttcc agcaaaagac
     2941 aaaatttaaa aataaaattt gtttggccaa aagatggacc ccggacctgc cttcgccgaa
     3001 gctacgcgca ggcagatcaa gtccggggtg acggaaggga tatgagtgat aattaatctt
     3061 tggctgtaat tttcggatga agtacacttt ttagaacgtg tgcgggacgg agttggttcg
     3121 gttgtttcca cgagggatga tacttttaga agcgatcaat aatcagggag aaaacatgac
     3181 tgacacaaca tctgcgatcc aaacacatta tgctttgaac aatctcaccg accgcatatt
     3241 gaaagctcta gaagtagcgg gacatgacac aaaaaacctt acagtcggga tgctaaattt
     3301 ggtggatcag ttgcatgggg gtggccttaa ttcgacaatc gcccaagcca gaatggttaa
     3361 aattatggaa aacactcagg tttttgatgc cggatgtggc gttggcggct caagccgata
     3421 tctcgcccac acatttggtt gtcagattga ggcgattgac ctcacgctgg aatatatcga
     3481 agcggcggcg cgtctgaaca aactttgcgg cattgatgac aagatttccg tcaaccaggg
     3541 aagcgttacc gatattcacc aagaagatca gagctttgat cttgtgtggt gtcaaaacgt
     3601 caccatgaat gtcagggata aaaccagaat gttcgctgag acctatcgcg tgcttgttcc
     3661 gggtggtcaa tacacgttca gccatttggc tggaggacct gccggagaac cttattatcc
     3721 attgccttgg gccagagacc cggcatacag ttttctcagc acgcccgaga tgattattca
     3781 atgtctggaa gaggtcgggt tcaccaacat tgaaaaccgg agcagaacag gcggctcggg
     3841 aaatgccgcg agacaatcta ctgacgattt ggcgcaaagc gtgattttgg gcgaagacat
     3901 gcctgagcgt cagaccaatg cgatgcgctc cagaaaggaa ggtaggatta ttgggatgct
     3961 tgtcaccgct gaacgaccag cgtgataaaa accaactgac gaccctgtaa gctaccgtca
     4021 aacttgcttc caatatctgc tcagaggtaa agctgacatt ttgaagtggt accgaaacca
     4081 ccggttttcc gtacaaacgc aaatttcttt ctctgtgaaa tctgtggtga aataatctgc
     4141 ttcatcaccg caagagagga cacgttaggc gacaaattga taagtcgata agacgtgcca
     4201 agaacatgtc cccgttacta ccccatcaac agggcgatgc cagggagggt tttgccttca
     4261 agccattcga ggaaggcgcc gccggccgat gagatatagg aaaacgtttc agtgaccccg
     4321 gcattggcaa gtgccgccat ggtgtcaccg ccaccagcca cacttaagag agaacctgtt
     4381 tgggtgagct tggccgcggc ctgggcggtg gcattagtgc ctcgatcaaa gggttcaaat
     4441 tcaaaggcgc cgagggggcc gttccaaacc agagtattgc aatcgctgag cagcgccgag
     4501 atcgcggcag tagtcttagg cccgacatcc aagatcattt gatccgccgg caccgcatct
     4561 atggcgacag ttgctgttgc ggtacctgct tccaacgctc cggctaccac ggcatcgatc
     4621 ggcaggtgaa ttttacatcc cgtctctttg gctttggcag tgatcgtccg ggccgtctcc
     4681 gccatgtctt cttctgagtg cgattgacca acggttagac cagccgaaaa taagaaggtg
     4741 ttggccatgg cgccgccaac gatcaaatga tcgactttgg tgataagatt ttccagcacg
     4801 ccaagcttgg ttgatatttt attaccgccc accagtgccg ccaccggatg aatagggctt
     4861 tccagcgcgc tgcaaagcgt ttctaattcc tgctgcatca accggccggc tgctgctggc
     4921 aagagccgcg ccacaccatc aattgaggcg tgggcccggt gcgcacagga gaaggcatca
     4981 ttgacataga tgtcgccatg ggcggcgaga tttttggcaa aatctggatc attgccctct
     5041 tcgcctgcat tgaagcgcaa attctctagt agcacgattt cgccaggctg ggccacatgc
     5101 gcgccatcag cggaaaaaat cacctcggtg tccacgagat aaccacttaa gacttcggcc
     5161 aagggtgcca aagacatttc gggcacgacc tcgcctttgg gacggccaaa atgactggcc
     5221 agcacaatac cggcgccacc ggttaaaatt tcgctgatgg taggtactat tttttcaatc
     5281 cgcgctggat cggtgacaac gccatcctgc atcggcacat tcatatcgac cctaagcagc
     5341 acacgcttac cggctaaatc gagg
//
LOCUS       DASCNL010000679         1165 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001387615, whole genome shotgun sequence.
ACCESSION   DASCNL010000679 DASCNL010000000
VERSION     DASCNL010000679.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001387615"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1165
                     /locus_tag="QF359_09070"
     CDS             <1..>1165
                     /locus_tag="QF359_09070"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HJO87099.1"
                     /translation="DKGAPLNTPVTAEKVLFLSESSARSVPSLCLPPAMHNKGNYIIS
                     LGNLCRWLGEQAETLGVEIYPGFAAAEILYHEDGSIQGIATGDMGVLEDGTQGPNYQP
                     GMELYAKYTFFSEGCRGHLGKQIKEKFELEKDVQSQTHGIGIKELWEVDPDKHQQGLV
                     IHTAGWPLDNQTYGGSFLYHLEDNQVAIGLVIGLDYQNPYLSPYDEFQRFKLHPSIRP
                     TLEGGRCIAYGARALNEGGLQCLPKLHFPGGVLTGCDAGTLNMPKIKGTHTAMKSGML
                     AAEAAFAAIAQGRANDDLVEYGDAFKKSWVQQELHTARNVRPSFKWGLLAGTMYTGID
                     QILLRGKAPWTLKHHGLDHEQLKKASACTAINYPKPDGEITFDKLTSVSFSATN"
BASE COUNT          288 a          300 c          296 g          281 t
ORIGIN      
        1 gacaaaggag caccgctcaa tacgccggtc acagctgaaa aagtattgtt tctgtccgaa
       61 tctagtgccc gtagcgtgcc tagcttgtgc ttgccgccgg caatgcacaa taaaggtaat
      121 tatattatca gcctcggcaa tctctgccgt tggctcggcg aacaggcgga gacgctcggc
      181 gttgagattt atccgggctt tgcggcggct gaaattcttt atcatgagga cggctccatt
      241 caaggcatcg ccaccggtga tatgggtgtc ttggaagatg gcacccaagg cccgaattat
      301 cagccgggta tggaactgta tgctaaatat actttctttt ccgaaggctg ccgcggtcac
      361 cttggtaaac agatcaaaga aaagtttgag cttgagaaag atgttcaatc acagacccac
      421 ggtatcggca tcaaggaatt gtgggaagtc gacccggata aacaccagca aggcctggtt
      481 attcacaccg ccggctggcc acttgacaat caaacttatg gcggctcgtt tctttatcac
      541 ttggaagaca atcaagttgc catcggttta gtcattggtc tcgattatca aaatccttat
      601 ctcagccctt atgacgaatt tcagcgcttt aaattgcatc catcaattcg gccaacgctc
      661 gagggcggcc gctgcattgc ctatggtgcg cgcgctttga atgagggtgg cttgcaatgc
      721 ctacctaagc ttcatttccc tggtggagtc ttgaccggct gcgatgcggg cacgcttaat
      781 atgcccaaga ttaagggcac tcatacggca atgaaatcag gcatgttggc agctgaagca
      841 gcctttgcgg cgattgccca gggccgcgcc aatgacgatc tggtggaata tggtgatgct
      901 ttcaaaaaat cctgggtgca gcaagaactg catactgccc gtaacgtgcg gccctctttc
      961 aaatggggct tgctggccgg caccatgtat accggcatcg atcaaattct gctccgcggc
     1021 aaagcgccct ggacactcaa acatcatggg cttgatcacg agcaattaaa gaaagccagc
     1081 gcttgcacag cgattaacta cccaaaaccg gatggtgaga ttactttcga caaacttacc
     1141 agcgtctcct tttcggcgac caatc
//
LOCUS       DASCNL010000680         1513 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001388548, whole genome shotgun sequence.
ACCESSION   DASCNL010000680 DASCNL010000000
VERSION     DASCNL010000680.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001388548"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            303..1181
                     /locus_tag="QF359_09075"
     CDS             303..1181
                     /locus_tag="QF359_09075"
                     /inference="COORDINATES: protein motif:HMM:NF013465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HJO87100.1"
                     /translation="MLHLISKIAVMALLLGSLFVSPVTAEINVVTTIKPLHSIVNNIM
                     LGVGKPALLMLSAVSPHDYKLKPSDIRTLQRANVIFWVGPQLESRLTKLIQQRGQTAK
                     VVTLLSSKELRILKITGRKTIDPHIWLSPENTRTIAAIVQRTLSTEDPKNTAIYLKNF
                     KKLDKTLIQLRREISAGLSIVLKAPFIVYHDGLLYFEDEFGLNNQGAILVSPEHHPGA
                     KRLSYIRRLIKKQKIRCVFGEPHYSQKLLKTVTAHSPAKIGTLDLIGVKLAPGPNLYA
                     SLMRNLAASFKSCLQD"
     gene            1230..>1513
                     /gene="hisI"
                     /locus_tag="QF359_09080"
     CDS             1230..>1513
                     /gene="hisI"
                     /locus_tag="QF359_09080"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HJO87101.1"
                     /translation="MSNIEKPAIEQVLDSLSFNDDGLIPAIAQQHDSGEVLMMAWMNR
                     DAITATLEEGRVVYWSRSRQALWHKGESSDQVQALKEMRWDCDSDTLLLQV"
BASE COUNT          429 a          366 c          328 g          390 t
ORIGIN      
        1 ttttaagcac ttccaggatc gaatatgcac cgattggcct gtggttcgac caaatgagct
       61 caagcacccg ccgcctgatc tgcgtcaacc gggcaccgcg ctgactgcaa agcgccgcgg
      121 ccttatcaag cgcatcaaca atgcaaatac gatgatcgtg cgaacccgca gaccccatcc
      181 aatcacgctt tgtagtcttt ttagaatgta tcatgattag ttctgtccaa aaccaaaatg
      241 ttatgttgta tcatttaatc ataaatgtta tactataaca attaataata ttggtatcag
      301 gcgtgctcca tttaatatct aaaattgctg ttatggccct gctgctggga tcgctttttg
      361 tcagcccggt gacagccgag ataaatgtcg tgacgacgat caaaccgcta cactccatcg
      421 tcaacaacat tatgctgggc gtcggaaaac cggctctttt gatgctctct gctgtctcgc
      481 cccatgatta caagctgaaa ccatcagata tacgaaccct tcagcgagct aatgttatat
      541 tttgggttgg gcctcaattg gaaagcaggc taaccaaact cattcaacaa cgtggccaaa
      601 cggcaaaggt agttacgttg ttgagttcaa aagaactaag aattttaaaa atcactgggc
      661 gtaaaactat cgacccacac atttggctta gcccagaaaa tacgcgcacc atcgccgcta
      721 ttgttcagcg cacattgtca acagaagacc ccaagaacac ggccatctac ctcaagaact
      781 ttaaaaagtt agataagact ttaattcaat tacgcagaga aataagtgcc ggcctttcga
      841 ttgttcttaa ggcacctttc atcgtttacc atgatggctt gctctatttt gaagatgaat
      901 ttggacttaa taatcaaggt gcgattttag tttcgcccga gcatcaccca ggtgccaaac
      961 gcctatctta tatacggcga ctaatcaaaa aacagaaaat tcgctgtgtc tttggtgaac
     1021 cgcactatag ccaaaaatta ctcaaaaccg tcaccgctca ctcgcccgct aaaattggga
     1081 ctttagattt gattggcgtt aaattggcgc ccggtccgaa tttgtatgca tcgctgatgc
     1141 gaaatttagc ggcttccttc aaatcctgtc tccaggatta acttaggcta aaccttgaca
     1201 gcgatagctg aaaagacgat tacctagcta tgagtaacat tgaaaaacca gcgatagaac
     1261 aggtgcttga ctcgttgtca tttaacgatg acgggttgat cccagcgatc gcccagcagc
     1321 atgatagtgg tgaagtgcta atgatggcct ggatgaaccg ggacgcgatc acggcgacac
     1381 ttgaagaagg ccgcgtcgtc tattggtcgc gctctcgtca agctctgtgg cataaaggtg
     1441 aaagctcgga ccaggtacag gcgcttaagg aaatgcgctg ggattgtgac agcgacaccc
     1501 tccttctgca agt
//
LOCUS       DASCNL010000681         1160 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001388801, whole genome shotgun sequence.
ACCESSION   DASCNL010000681 DASCNL010000000
VERSION     DASCNL010000681.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1160)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1160)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001388801"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="QF359_09085"
     CDS             <1..219
                     /locus_tag="QF359_09085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87102.1"
                     /translation="LSISAIAIAYASSFASATYYTALTLLPVMLGFAWVGSKFFHGVS
                     DEKFRRLLNFILILVGLAIIARTFLLPN"
     gene            complement(282..>1160)
                     /locus_tag="QF359_09090"
     CDS             complement(282..>1160)
                     /locus_tag="QF359_09090"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87103.1"
                     /translation="QILDMDDERLELMDKNGIEYAILSNNAPGVQGILDTNEAIEISK
                     IANDAMADAVTKHPKRYGAFAALPMQDPDAASAELTRCVKEMGFKGAMVNGFTQKDEP
                     DSAIYYDIPEYRSFWATVSELNVPFYLHPRMQIPSRAPIYDGHPWLKSSPWGFAVETS
                     THALRMCGSGMFDDYPDLKIFIGHLGEHIPYDLWRIDARMAFSRREYRGNRPLGEYFL
                     DNFMITTSGNFSDPAFRCCLEVVGIDRMFFSADYPFETMEDACEWFDATQVIDDKQRL
                     QIGRTNAINFFNLDLN"
BASE COUNT          304 a          282 c          268 g          306 t
ORIGIN      
        1 ttatcaattt cagcaattgc aattgcctat gccagctcct ttgcttcggc aacttattac
       61 actgccttaa cactgctacc ggtgatgctt gggtttgcct gggtgggatc aaaattcttc
      121 cacggcgtat cggatgaaaa gttccgccgc ctgcttaatt ttatcttgat cctggttggt
      181 ttagcgatca ttgcccggac ttttttactc cctaactgat aacaaaaaac tcagatgcag
      241 ttgcctacac ctgagtttta ttacgttagg tcgagccgca gctaatttaa atcaagatta
      301 aagaaattga tcgcgttggt gcggccaatt tgcagacgtt gtttatcatc gataacttgc
      361 gttgcgtcaa accactcgca ggcatcttcc atggtctcaa acggatagtc agctgagaag
      421 aacatgcggt cgataccaac aacttccaag cagcagcgaa aagccgggtc ggagaagttg
      481 ccactggtgg tgatcataaa gttatcgagg aaatattcac caagcggacg attgccgcga
      541 tattcccggc gtgaaaatgc catccgcgcg tcaatccgcc acaaatcata cggaatatgt
      601 tccccgagat ggccaatgaa aattttgaga tcgggataat catcaaacat accggaaccg
      661 cacatcctga gcgcatgggt cgaggtttca acggcaaagc cccagggtga gcttttgagc
      721 catggatgac catcataaat cggcgcccgt gacggaattt gcatccgcgg gtgcagatag
      781 aacggcacat ttaattcaga taccgtcgcc caaaagctgc ggtattcggg aatgtcgtaa
      841 tagattgctg aatccggctc atctttttgg gtgaaaccat taaccattgc gcctttaaaa
      901 cccatttcct tgacgcagcg cgtgagttct gccgacgcag catccgggtc ctgcatcggc
      961 agagcggcaa aagcgccata acgtttagga tgtttggtaa ctgcatccgc catcgcatca
     1021 ttggctattt tagaaatttc gatggcttca ttggtatcga gaataccctg cacaccgggg
     1081 gcattattcg aaagaattgc atattcgata ccgttcttat ccattaattc aagacgttca
     1141 tcgtccatat cgagaatctg
//
LOCUS       DASCNL010000682         2856 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001389454, whole genome shotgun sequence.
ACCESSION   DASCNL010000682 DASCNL010000000
VERSION     DASCNL010000682.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001389454"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(189..353)
                     /locus_tag="QF359_09095"
     CDS             complement(189..353)
                     /locus_tag="QF359_09095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87104.1"
                     /translation="MSLCDFGDAMQAPALLQGVVFAFLSFGDDSDSIALIGDRGSSRL
                     LGVEDTLNWW"
     gene            442..1743
                     /locus_tag="QF359_09100"
     CDS             442..1743
                     /locus_tag="QF359_09100"
                     /inference="COORDINATES: protein motif:HMM:NF023330.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3422 domain-containing protein"
                     /protein_id="HJO87105.1"
                     /translation="MTFRDHPLRKSLAGELHARPYGTIATPAQISHLALASGEDMAAA
                     EIAHLTTLCSHFHVGAPPHGASLFNADLGAIRLKWERHTEFSTYTLIAENNFDIPFKN
                     SAVAAVSGDWLSALPGDVIAALHITVQESTIQDTDSDKVREFFDNNTLVGGLLGDDQA
                     CWWTDFVVHSDGFSRFLIRGQNLLATTLGRITQRIIDMETYRMMAMLALPNAQAARPQ
                     VAQMETHLSAILQELADPDTAQSERELLKELTDLAAQSERVSGAVTYRFSASRAYAEI
                     VRQRVRALREDRVAGIQPAGDFLLTRFEPAMETCENLARRLNALGDRVTRASNLLRTR
                     VDVTVEEHNRDLLHSMDRRAQTQLRLQATVEGLSVAAITYYVISLIIYLAEGAVELGS
                     SINPYVAGMIALPFVTVAIWCGIRRVRKALTNGGEADDSWA"
     gene            2139..>2856
                     /locus_tag="QF359_09105"
     CDS             2139..>2856
                     /locus_tag="QF359_09105"
                     /inference="COORDINATES: protein motif:HMM:NF019607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HJO87106.1"
                     /translation="MINISKIGAAAIAFSIAFGASFQASSDANINKLLSTIKLPPGFK
                     ISLFAKVPRARSMAIGTPLGTVFVGSRHGTIHMLRDRDKDGVAEEIVLKTDKLKVPNG
                     VAYNGMSLYIVEQNQITFWAGPSEFDTARPLVPLIPIVKNLPDKFLHGWRYAAFGPDK
                     KLYVSVGSPCNVCQVSGHEGKIIRMDGNGKNIEIVASGVRNSVGFDWHPKTRELFFTD
                     NGSDGMGDDIPADELNHVTKM"
BASE COUNT          739 a          737 c          701 g          679 t
ORIGIN      
        1 ccaaataact tcaattattc ctcactttgg tcttcatcat acccctaccg gggtgtatta
       61 aggacgtgta gccgtcctta ataatcctca ccaccaactg ttgtcagttg gatcacaaga
      121 cgttaagtaa agaaagtagt ctacagaacc gccatgaagt atggcggtaa gtcccaagtg
      181 ttacggtgtc accaccagtt caaggtgtcc tccactccaa gtaaccgtga ggaacctcga
      241 tcaccaatca gagcgatgct gtcagaatca tcaccgaaag acagaaaagc aaagaccaca
      301 ccctgcaaca gcgccggcgc ttgcatcgca tcgccaaagt cgcataaact caaacaaagg
      361 agccggtcac tcttcttatc aacatatcca aatcgtctaa aatcatctga cgatttaaca
      421 gtatggagta tactaagacg catgacattt cgtgatcatc cgttgcgaaa gtcgctggcc
      481 ggtgagttgc acgccaggcc ttacggaacc atcgcaacac cagctcagat ttctcatctg
      541 gcgctggcta gtggcgagga tatggctgct gccgaaatcg cccatcttac gacactctgc
      601 agtcattttc atgtgggcgc gccgccgcat ggtgcgtccc tttttaatgc tgatctcggt
      661 gctatccgtc tgaagtggga acgtcatacg gagttttcca cctatacact tattgctgaa
      721 aacaatttcg acataccatt caaaaactca gcagttgctg ctgtatctgg cgattggctc
      781 tcggcactcc ccggcgatgt tatcgccgcc ctgcatatta ccgtgcagga atccaccata
      841 caggacactg attctgacaa ggtacgtgaa ttttttgata acaatacgct tgtcggtgga
      901 cttctgggcg acgatcaagc ttgttggtgg accgatttcg ttgttcatag tgacggcttt
      961 agccgttttt tgatccgcgg gcagaacttg ctggcgacaa cgctagggcg gatcacgcaa
     1021 cgcatcatcg atatggaaac ttaccgcatg atggcaatgt tagctttgcc gaacgcgcag
     1081 gccgctaggc ctcaggtcgc gcaaatggaa acccacctat cggccattct gcaagaacta
     1141 gcagatcccg atacagctca gagtgaacgc gaattgttga aagaactgac tgatctggcc
     1201 gcccagtccg agcgggtttc aggcgcggtg acctatcgct tcagcgccag ccgcgcttat
     1261 gcggagatcg ttcgccaacg cgtgcgggcg ctacgcgaag atagggtcgc gggcattcaa
     1321 ccggcaggcg acttcctgct gacacgcttt gagccagcca tggagacttg tgaaaacctg
     1381 gccagacgcc tgaacgcact cggtgatcgt gttacccgag catcaaacct gcttcgaaca
     1441 agggttgacg tgacggtgga agaacataat cgagatttac tccattcgat ggaccgccgc
     1501 gcgcagacac aattacgcct acaagctacc gtcgaaggac tttcggttgc cgccattacc
     1561 tactacgtca ttagcctgat catttatctg gctgaagggg cagtagaact tggctcatct
     1621 atcaatccct acgtggccgg tatgatagca ctacccttcg tcacggtggc catctggtgc
     1681 ggaatccgac gagtccgcaa ggctctgacc aatggaggag aggcagacga ttcctgggct
     1741 taagtcaatc ttagtcttta ccaaggtgac tgtgaggacg cttaagatcg atggtaaatg
     1801 ctccctttcg cgtgctccct agaacgaata atggatcagc tattttcagc taatccatta
     1861 attattccaa taatatcaac taattaagtg gtgggcgata taggatttga acctataccc
     1921 aatgattaat gatccaaaaa cctattggct tagcattaaa agttaaggta acaatgcccg
     1981 gcattacaat gaattcgaag caattaaata ggcaggtggt tcgttgctgc gtttggtatg
     2041 aacgaaaact acagcctgta aactgcttaa atgttaggtg aaaaattcaa ataatgatag
     2101 gatttgtggc gaaaatatat tcgcgagagg aaatcataat gatcaacata tcaaaaatag
     2161 gggccgccgc gattgctttt tcgatcgcgt ttggtgcgtc gtttcaggca tcgtccgacg
     2221 ccaacatcaa caaattgctc agcacgataa aactaccgcc cggcttcaaa atcagcctgt
     2281 tcgccaaagt gccgcgagcc cgttccatgg ccatcggtac gcctttaggg acggtcttcg
     2341 tcggctcccg ccacggcacc attcatatgc tgcgagaccg cgacaaagac ggtgtggcgg
     2401 aagaaatcgt gctcaagacc gacaagctga aagtgcccaa cggggtcgcc tataacggca
     2461 tgtccctcta tatcgtcgag cagaatcaga taactttttg ggccggaccg tccgaattcg
     2521 atacggcgcg tcctctggtg ccgctgatcc caattgtcaa gaatctgccg gacaaattcc
     2581 tgcacggttg gcgctatgcg gccttcggcc cagacaagaa actatatgtc tcggtcggtt
     2641 caccctgcaa tgtctgtcag gtcagtggtc acgaaggcaa gattattcgc atggacggca
     2701 acggcaagaa tatagaaatc gtggccagcg gtgtccgtaa ttcggttggt tttgactggc
     2761 atccaaaaac cagggaactg tttttcaccg ataacggctc ggatggcatg ggcgacgaca
     2821 ttcctgccga tgagttgaac catgttacca aaatgg
//
LOCUS       DASCNL010000683         2578 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001389829, whole genome shotgun sequence.
ACCESSION   DASCNL010000683 DASCNL010000000
VERSION     DASCNL010000683.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001389829"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="QF359_09110"
     CDS             <1..677
                     /locus_tag="QF359_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HJO87107.1"
                     /translation="IEASGAEIVTVAVRRVNITDPAQPMLVDYVDPKKYTYLPNTAGC
                     FTADDAVRTLRLAREAGGWDLVKLEVLGDEKTLYPKMIETLDAAEILLKEDFKVMVYC
                     SDDPILAKRLEDIGCHAIMPLAAPIGSGLGVQNPVNIRLIKEQSSVPVLVDAGVGTAS
                     DATIAMELGCDGVLMNTAIAEAKDPLKMARAMKAGIEAGRLAYLAGRMPRKKYADPSS
                     PLSGLI"
     gene            1103..2338
                     /locus_tag="QF359_09115"
     CDS             1103..2338
                     /locus_tag="QF359_09115"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87108.1"
                     /translation="MTDENAVRKKERYVVGLISAAHFFSHFYILALPPLFLAMKEDLG
                     VTFTELGLITSVYAVGSFSGQYPMGILTDKFGPRWFLIFGTLTVSSVFVLMGLFPIYW
                     VMVGLALFAGWGDSVFHPADFVVMTASVRPKRSGRAYAIHSFFGFAGFAAAPVIVDPL
                     RVYFSWQTALVVIGCLGLAMTVMLLANKSLLVGEDDAIHSEATQIQPSQSMGVMEFIK
                     FPPILILFFFYIAVALAGNGIQQFSPSALPSMYDIELSTANRVLFVFMVGISVGVLFG
                     GYIADRVQRLELVATVSYIISIITLCIVALNFLPFFLAAAALVLGGFMTGIVMPSRDV
                     LVRAVTPKGNAGKAFGFVNSGFGFGGMVGPLVFGSIMDSGEVNGIYYASAGFMFFAII
                     TALAAGHYARAGTASQPAE"
     gene            complement(2342..>2578)
                     /locus_tag="QF359_09120"
     CDS             complement(2342..>2578)
                     /locus_tag="QF359_09120"
                     /inference="COORDINATES: protein motif:HMM:NF027449.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase C-terminal
                     domain-containing protein"
                     /protein_id="HJO87109.1"
                     /translation="LAREPDNVRATSLLTEVESQDTHQAMVTTLGLEKEINTFFRLGS
                     SSVIDKLREAFPDLPANPDEKTVFLKLRELRNDW"
BASE COUNT          536 a          604 c          690 g          748 t
ORIGIN      
        1 caatcgaagc atcgggagcg gagattgtca ccgtcgccgt caggcgggtg aatatcacag
       61 atcctgctca gccgatgctg gtcgattatg tcgatcccaa aaaatatacc tacctgccaa
      121 atactgccgg ctgctttact gccgatgacg ccgtccggac tttgcgcttg gcccgtgaag
      181 ccggtggctg ggatttggtc aaactcgaag tcttaggcga tgaaaagaca ctttatccga
      241 aaatgatcga gacccttgac gcggcggaaa ttctactcaa ggaggatttc aaagtgatgg
      301 tctattgcag tgatgatcca attctcgcca agcgtctcga agatataggc tgtcatgcca
      361 ttatgccttt ggcggcgccg attggctcgg gcctcggggt gcaaaatccg gttaatattc
      421 gcctgatcaa agagcaatct tcagtgcctg tgctggtcga tgctggcgtt ggtacggcct
      481 ctgatgcgac aattgccatg gagcttggct gtgatggcgt gttgatgaat acggcgattg
      541 ccgaagccaa ggatccgctt aaaatggcgc gcgccatgaa agctggtatc gaggccggcc
      601 ggctggctta tctagccggg cggatgccgc gcaaaaaata tgctgatccg tcttcgccgc
      661 tctctggcct gatttaaatc ggtgaggaga gatggcctca ctagaaaagt tgtttgccaa
      721 ggcgtaggca catcatcagg cgaatattga ccggattttg ataacattca cgggctcaag
      781 ctagtaccat gtctccgaga tggatagccc ctggtcgctg acgtctggca cgcgttttgg
      841 ggcacagcaa tttcaggttt atctggaaaa tagtctcgtc tgttgtacgt ggtttgctgg
      901 tggtcagcgt ttggttgatg tcgctaatcc agcccagcca aaagaggttg gtttatttta
      961 taccagaacc gcgagaaggc ttttcagtcc cgcaaagcaa tgacgtcgag attgaagatc
     1021 ggggattgat gtatctgttc aatcgtgaca gaggttttga tatcttggaa ttcaccggat
     1081 aagatttggg gataagaact ctatgacaga tgaaaatgcg gtacgtaaaa aggaacgcta
     1141 tgtcgtcggt ctaatttctg ccgcgcattt cttttcgcat ttttatattc ttgccttacc
     1201 gcctctgttc ctggcgatga aggaagactt gggtgttacc ttcaccgaac ttggtttgat
     1261 cacctcagtt tatgccgtgg gatcattttc tggccaatat ccaatgggta ttttgaccga
     1321 taaatttggt ccacgctggt ttttgatctt tggtactttg accgtttcca gtgtttttgt
     1381 actgatgggt ctgttcccaa tttattgggt gatggtcgga ctcgctttgt ttgctggctg
     1441 gggggatagc gtttttcacc ccgccgattt tgtcgtcatg actgcatcgg tccggccaaa
     1501 aaggtcggga cgggcttatg ccatccactc attttttggc tttgccggct ttgccgccgc
     1561 gccggtgatt gtcgatccac tcagggttta ttttagctgg cagacagcgt tggtcgtgat
     1621 tggttgtcta ggcctcgcaa tgacggtgat gttgctggcc aataaatcac tcctggtcgg
     1681 agaggatgac gcgatccata gcgaagccac tcaaattcag ccatcgcaaa gcatgggagt
     1741 gatggaattt atcaaattcc cgcccattct aatcctgttt ttcttctata tcgcggttgc
     1801 actggccggc aacggtattc agcaattttc accttccgct ttgccgagta tgtatgacat
     1861 tgaattatca acagcaaacc gtgttttgtt cgtatttatg gttgggattt cagttggcgt
     1921 gctatttggt ggttacatcg ccgatagagt ccaacgcttg gaattagtgg cgaccgttag
     1981 ttatataatt tccattatca cgctttgtat tgttgctttg aattttctgc cgttcttttt
     2041 agccgccgcg gcgttggttc tgggcggttt catgactggc atcgttatgc cgtcgcgcga
     2101 cgtcttggtt cgcgccgtca cgcctaaagg caatgccggt aaagccttcg gcttcgttaa
     2161 ttccggtttt ggctttggcg gcatggtcgg cccgctggtc ttcggctcta ttatggattc
     2221 cggcgaagta aacggaatat attacgcgtc cgcgggcttt atgttctttg ccattattac
     2281 tgctttggcg gcaggccact atgcccgtgc cggaactgcg tctcagccag ccgaataata
     2341 tttaccagtc gttacgcaac tcacgcagtt tcaaaaatac agttttctca tctggattag
     2401 caggcaggtc ggggaaagct tcccgtaatt tatcgatgac gctggaactg cccagccgga
     2461 agaacgtgtt aatctctttt tccaaaccca aggtggtcac cattgcttga tgcgtatcct
     2521 gactctcgac ttcggtcagc aggcttgtag cgcgcacgtt gtcgggctcc cgggcgag
//
LOCUS       DASCNL010000684         1441 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001390319, whole genome shotgun sequence.
ACCESSION   DASCNL010000684 DASCNL010000000
VERSION     DASCNL010000684.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001390319"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1215)
                     /locus_tag="QF359_09125"
     CDS             complement(<1..1215)
                     /locus_tag="QF359_09125"
                     /inference="COORDINATES: protein motif:HMM:NF024753.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HJO87110.1"
                     /translation="MSQKLKPIVSYSLLFLAAIVLTGCDNYFGQNKAPSLSGKRISIL
                     IQQRSIEPDSSAAGHKIVLPAPTPNNDWPQAGGYANHAMHHMRIGKALQERWSISVGR
                     GTNDEERLMAQPIVAGNTLFSMDSETIVSAYNLKDGAEIWSVELTPKEEDDDHVNGGL
                     AYENGKVFATTGFGQVVAVAAKTGKVLWRRNVGAPVRSAPTARGNRVFAIAVTNKLFA
                     LNGETGAVLWSHSGIEEAINLLGGSSPAVDSGVVVAPYSSGELFALKVENGQELWADS
                     LAGTRRGATSSALGTIRGRPIIDRGIVFAISNSGQFAAINLRTGRRIWERPVGGIESP
                     WIAGDYLFVISNNTDLLALGRLNGRIYWVMALPEWEDPEDREGKITWTGPILASDRLI
                     VAGSSGEALSVSP"
     gene            complement(1247..>1441)
                     /locus_tag="QF359_09130"
     CDS             complement(1247..>1441)
                     /locus_tag="QF359_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87111.1"
                     /translation="RLERLRNGTSPWRHSAKELSALLAQKSGNKDKARKLFQEIADDA
                     TAPSGIRTRAAELTAILGGE"
BASE COUNT          341 a          390 c          363 g          347 t
ORIGIN      
        1 cggagaaacc gacaaggctt cacctgacga gccggcgacg atcaatctgt cgctggccaa
       61 tatcggaccg gtccaggtga tttttccttc gcggtcttcc gggtcttccc attctggcaa
      121 cgccatcacc caatatatac ggccattgag gcggcccaag gcaagcaggt cagtattgtt
      181 ggatatgaca aagaggtaat ctccagcgat ccacgggctt tcaataccac caaccgggcg
      241 ttcccagatg cgtctgccgg tacgcaaatt aatggccgcg aattgaccgc tattgctaat
      301 cgcaaatacg atgccacgat caataatagg acgtccgcgt atggtgccga gagcggagga
      361 agtcgcgccg cgtctggtac cagcaagcga atctgcccac agctcttggc cgttttccac
      421 ttttaaggca aacagttcac cagaagaata gggagcgacg acaacgccac tatcgacagc
      481 cgggctgcta ccgcccagga gattaatggc ttcttcaata cctgaatggc tccaaagaac
      541 tgcaccggtt tcaccattta aagcaaatag tttattggta acggcaatag caaaaacccg
      601 gttgccacgt gccgttggtg cagaacgaac cggggcgcca acattgcggc gccaaagaac
      661 tttgccggtt tttgccgcga ccgcaacaac ctgtccaaac cctgtggtgg caaagacttt
      721 gccattttca tacgccagcc cgccattgac gtggtcatca tcttcttcct ttggcgtcaa
      781 ttctacgctc caaatctcgg ccccatcctt caaattgtag gcgctgacaa tggtttcaga
      841 atccatcgag aagagagtgt ttccagcgac aattggctgg gccataaggc gttcttcatc
      901 attggtcccg cgaccgacgc taatactcca gcgttcttga agtgctttgc caatgcgcat
      961 gtgatgcatg gcgtgattgg catagccgcc ggcttggggc caatcattat tcggtgttgg
     1021 cgcgggcagc acaattttgt gcccagccgc agaagaatcc ggctcaattg aacgttgctg
     1081 gatcaatatc gaaattcgtt taccggaaag ggagggtgct ttattttggc caaaataatt
     1141 atcacaaccg gtcaatacta ttgctgccag gaaaagcagc gaataagaaa ctatgggttt
     1201 taatttctgc gacatattat cgtttcctgg gaccattatt agcggtctac tccccgccca
     1261 gaattgctgt taattcggct gccctggtgc gaatgccgga tggcgctgtc gcgtcgtcgg
     1321 caatttcctg gaacagtttc cgagccttgt ccttattacc ggatttttgt gcgagcaagg
     1381 cggaaagctc tttggcgctg tgccgccacg ggcttgtacc attcctcaac cgttcaagac
     1441 g
//
LOCUS       DASCNL010000685         1454 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001392338, whole genome shotgun sequence.
ACCESSION   DASCNL010000685 DASCNL010000000
VERSION     DASCNL010000685.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1454)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1454)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001392338"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..870)
                     /gene="senB"
                     /locus_tag="QF359_09135"
     CDS             complement(<1..870)
                     /gene="senB"
                     /locus_tag="QF359_09135"
                     /inference="COORDINATES: protein motif:HMM:TIGR04348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenoneine biosynthesis selenosugar synthase
                     SenB"
                     /protein_id="HJO87112.1"
                     /translation="MKISLITPAKKRSKNGNRTTALRWARILRDLGHRVEIAVEYEGQ
                     NADLMIALHAWRSASPIKLFRDIYPNHPLVLALTGTDINEFIRTDPEPTLAAMETADA
                     LVCLHDLTIDVTPKKFHQKLHVIYQSAPPLPKKRRPAKMHFDICLIGHVRDVKDPLRG
                     ALALRDVSESSKLRLIHMGKAHNNAWEKRGLAEMKRNPRYLWQGEKAGWQVRRELGKT
                     NLMIITSLSEGGANVVSEALVAGVPVIASEINGNVGMLGKDYSGYYPVGNEKALQKLL
                     LKCENDKMFLADLT"
     gene            907..>1454
                     /locus_tag="QF359_09140"
     CDS             907..>1454
                     /locus_tag="QF359_09140"
                     /inference="COORDINATES: protein motif:HMM:NF024273.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HJO87113.1"
                     /translation="MTEIVSTQTLVDLLEDANSRTLELVDGLDSDQIIGPQLPIVNPL
                     LWEIGHVGWFYEQFILRMLYGSKKTLENGDDMYDSIAIEHGVRWDLSLLPLPDSLKYI
                     DEVRDRLIDRLGEISANNMASEQDSFIYPFATFHEDMHTEAYTYTRNTLEYPQPEFAA
                     AKELTKAELETGPLPGDVEIPGG"
BASE COUNT          377 a          360 c          319 g          398 t
ORIGIN      
        1 ggtcagatca gccagaaaca ttttatcgtt ttcgcatttg agtaataatt tctgcaatgc
       61 tttttcattc cctacgggat aataacccga gtagtcttta cccagcatcc ctacattacc
      121 gttaatttct gacgcaatta ccggcacgcc ggcgaccagc gcttcagaaa caacattggc
      181 cccgccctcg gacaaagacg taataatcat cagattggtt ttgcccagct cgcggcgcac
      241 ttgccatccg gccttctctc cctgccaaag atagcgcgga ttacgtttca tttcggccag
      301 accccttttc tcccaagcgt tattgtgagc cttacccata tgaatcagcc gaagctttga
      361 actttccgat acgtcccgga gcgccagggc gcctcttaag ggatctttga catcccgcac
      421 atggccaatc aggcaaatat caaaatgcat tttggccggt cggcgttttt taggtaatgg
      481 cggcgctgac tgataaatca catgaagttt ctggtggaac tttttgggtg taacatcaat
      541 ggtcagatca tgcagacaaa ccagtgcatc ggcagtttcc atcgctgcca aagttggttc
      601 tggatcagtt cggataaatt cattgatatc ggtaccagtt aaagccaaaa ccagcggatg
      661 attagggtaa atatcccgaa acaatttaat cgggcttgca ctccgccacg catgcagcgc
      721 aatcatcaga tctgcatttt gaccttcata ttcaactgca atttcgacgc gatgacccaa
      781 atcacgcaaa atacgtgccc agcggagtgc cgtagtgcga tttccgttct ttgacctttt
      841 ttttgccggt gtgattaggc taatcttcat ttaagtttcc acatatttcc ctgacggaaa
      901 gatattatga ctgaaattgt tagcacacaa actttagtag atttactgga agacgcgaat
      961 tcacggactc ttgaactggt cgatggtctc gatagtgatc agatcatcgg accccaactg
     1021 ccgatcgtaa atccattgct gtgggaaatt ggtcatgttg gctggtttta tgaacaattt
     1081 attctacgca tgctttacgg tagtaaaaaa acgcttgaga acggtgatga tatgtatgat
     1141 tccatcgcca ttgagcatgg cgtgcgatgg gatttatcgc ttttgccgct tcccgactca
     1201 cttaaatata ttgatgaagt tcgagaccgc ctgatcgacc ggctcggcga aatttcagcc
     1261 aataatatgg caagtgaaca ggatagcttt atttatcctt ttgccacctt ccacgaagat
     1321 atgcacacgg aagcctatac ctatacccgc aacacgcttg aatatccgca gccggaattt
     1381 gctgcagcca aggagcttac caaagcagag cttgaaacag gacctctgcc gggtgatgtc
     1441 gaaatacccg gcgg
//
LOCUS       DASCNL010000686         1788 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001393241, whole genome shotgun sequence.
ACCESSION   DASCNL010000686 DASCNL010000000
VERSION     DASCNL010000686.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001393241"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="QF359_09145"
     CDS             <1..681
                     /locus_tag="QF359_09145"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87114.1"
                     /translation="LNVMIWHIFSAWGIRLLGSGQASIIAYTMPLWAVVFSMMFVGER
                     PTAQRLLGLFLGLIGLGTLTVGEFGIFTVAPLGTTFMVIAAISWGAGTAVQKRVNWQM
                     SAIALAGWQLLLGGVPITIIAFFLERDQWLAITQTISPAAIWSTILVLVYPIIFCWFA
                     WFRIVKEVPVSVSTVSIMLVPVIGVYSGNLILDEPISWHEVGGLLLVCSALALVLLPS
                     YKKCVQSN"
     gene            complement(929..1783)
                     /gene="panC"
                     /locus_tag="QF359_09150"
     CDS             complement(929..1783)
                     /gene="panC"
                     /locus_tag="QF359_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HJO87115.1"
                     /translation="MSNDIEIVRTVADLRQRLTAWRQDGLTVGLVPTMGALHDGHFSL
                     VEQAVQSNDRTITSLFVNPKQFGSTEDLDVYPRDEATDVAALAARGVDLLFAPNVEEM
                     YPDSAVTAITVPGIGDVLEGAFRPGFFTGVATVVAKLLIQSLPDRAYFGEKDYQQLCV
                     IKRLTKDLDLPIDIAGCPIVREPDGLALSSRNAYLNAGERQAAPALHQTLVSTGDALA
                     KGAAVAASVSAATAELLKAGFTKVDYIAVCDPASLEELEKVSGQARLLAAAWLGKTRL
                     IDNIAIEI"
BASE COUNT          412 a          449 c          441 g          486 t
ORIGIN      
        1 ctcaatgtga tgatctggca tatattcagt gcttggggta tccgtttgct gggttccgga
       61 caagcctcga tcattgccta cacgatgccg ctttgggccg tcgttttcag tatgatgttc
      121 gttggtgaac ggccaacagc acagcgtctt ctagggttat ttctaggtct gatcgggctc
      181 ggtacgttaa ccgtaggcga gtttggtatt tttaccgtcg cccccctcgg cacaactttt
      241 atggtgatcg cagcgatttc ctggggggcg ggtacggcag ttcaaaaacg agtgaattgg
      301 caaatgtcgg ctattgccct agccggctgg cagctgcttc taggtggtgt gccaattacg
      361 ataattgcct tctttctgga acgtgatcaa tggctggcga taactcagac aatttcacca
      421 gcggcaattt ggtcaactat tttagttctc gtctatccaa ttattttttg ctggttcgcc
      481 tggttccgca ttgtcaaaga agtaccggtt tcagtctcca ccgtgtcgat catgctggtg
      541 ccggttatcg gcgtctacag cggcaatcta attttggatg aaccgatcag ttggcatgaa
      601 gtcggcggtt tattacttgt ttgcagtgcc ttggcgttgg ttttattgcc atcctacaaa
      661 aaatgtgttc aatccaatta atagggatta ttttgcagtt atttgcagtt caacgcatcg
      721 tttatagcag caagtgtttc gggaatatca attggcttgg ttaaatattg caagaatcca
      781 gccgccatac cctttctaat ttgtgatggt attgcgttag ccgtgaccgc gattattggt
      841 gtcgaagaca tagatttgct ggtcctgaaa acgtctagcg cttgacgcgc ggatcgtagc
      901 caataaatat tctgattata tattttacct aaatttcgat tgcgatattg tcgatcagcc
      961 gggtcttgcc gagccaagcc gccgctagta gccgtgcttg acccgaaacc ttttcaagtt
     1021 cttcgagact ggccggatca caaactgcaa tataatcaac tttggtaaag cctgctttaa
     1081 gaagctcggc cgttgccgcg ctaacgcttg cggcaaccgc agcacctttt gccagcgcgt
     1141 caccggtgct caccagcgtt tgatgtaaag caggcgccgc ttgccgctcc ccagcattca
     1201 aataggcgtt gcgcgatgat aaggcgagcc cgtccggctc acgcacaatt ggacaaccag
     1261 caatgtcgat gggtaaatcc aaatctttgg tcaggcgttt gatgacgcaa agctgttggt
     1321 aatctttctc accaaaatag gcacgatccg gcaaagattg aataagcagt ttggccacca
     1381 cggtcgcaac accggtaaaa aaccctgggc gaaaagctcc ttccagaacg tcaccaatcc
     1441 ctgggacagt gatcgcagtc acggcgctat ccggatacat ttcctcaacg ttgggcgcaa
     1501 ataacagatc aacgcctctg gcagccaagg cagccacgtc tgtcgcttca tcccgcggat
     1561 atacatctaa atcttcggtt gatccaaatt gcttcggatt gacaaacagg ctggtgatgg
     1621 tgcggtcatt tgattgaaca gcttgctcaa ccagcgaaaa atggccgtca tgcagcgccc
     1681 ccatggttgg caccagccca acggttaggc catcctgccg ccacgccgtc agccgctgcc
     1741 ggagatcagc aaccgttcgg acaatctcaa tatcattaga catgtatt
//
LOCUS       DASCNL010000687         2262 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001393643, whole genome shotgun sequence.
ACCESSION   DASCNL010000687 DASCNL010000000
VERSION     DASCNL010000687.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001393643"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /locus_tag="QF359_09155"
     CDS             complement(<1..1011)
                     /locus_tag="QF359_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HJO87116.1"
                     /translation="MEIPDGLTFDDVLLEPAASDVLPAHTNTQTRLTKSIELGIPLLS
                     AAMDTVTESALAIAMAQAGGIGVIHKNLEADEQAAEIKKVKKFESGMVVNPITIEPNA
                     TLSDAQALMNHNGFSGFPVVEEGDSKLVGILTNRDVRFATEPKQKVYELMTRHSDDKP
                     LVTVEEGVDLEEAKRLLHQHRIEKLVVVDDNFACVGLITVKDMEKAQAFPDACKDEKG
                     RLRVAAATGVGNAGLARAEQLLDAEVDVIVVDTAHGHSAGVLGAVEKIKKLSNYCQVL
                     AGNIATADGAKALIDAGADSVKVGIGPGTICTTRMIAGVGMPQFSAVFEAAEICKKAG
                     IPV"
     gene            complement(1119..1868)
                     /locus_tag="QF359_09160"
     CDS             complement(1119..1868)
                     /locus_tag="QF359_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HJO87117.1"
                     /translation="MSKKPGGTNPRAKKQSSGNKSGRGGRDLKVRVKTAKGRKGSSTR
                     WLQRQLNDPYVAAAKRAGLRSRAAFKLEELDDKFKFLKPNMRIVELGAAPGGWTQVLV
                     SRVGTEKPDSKAKIIAIDLTEMDSLPGAKVVLLDFMDDEAPEIIKKTLGGPADAVLSD
                     MAPKITGHPKTDHLRVIGLVEAAYKFATEVLAPGGCFVSKVFQGGTEQTLLADMKRTF
                     AKVHHAKPPSSRNESAEMFVVAQNYRGGNTD"
     gene            complement(1865..>2262)
                     /locus_tag="QF359_09165"
     CDS             complement(1865..>2262)
                     /locus_tag="QF359_09165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87118.1"
                     /translation="TANNVQMLGTSGTVTTLGAVHLELDQYNRLLIDGLDLTFNDLNN
                     ATNKLTKLDYDGRSEIPCIGNERAELVIPGCAILEAICQTWPVGQLRVADRGLREGML
                     LELMINNGVPVLGNPAANYQHNAEIRPAQ"
BASE COUNT          523 a          583 c          558 g          598 t
ORIGIN      
        1 cacgggaatg ccagcttttt tacaaatttc ggcggcctca aagacagcgg agaattgcgg
       61 catgccgaca ccagcaatca ttcttgtggt gcagatagtg ccaggaccaa taccgacttt
      121 gacagaatct gcgccagcat cgatcaaagc tttggcaccg tctgccgtcg caatattacc
      181 ggctaaaacc tgacagtagt tgctgagttt tttaatcttt tcaacagcgc ctaaaacgcc
      241 ggcggaatga ccgtgcgcag tatcgacgac aatcacatca acctcggcat caagtaattg
      301 ctcggcgcga gccaatccag cgttgccgac gccggtagct gcagcgaccc gcaagcggcc
      361 tttttcgtcc ttgcaagcat ccgggaaggc ttgtgctttt tccatatcct taactgtgat
      421 cagtccaacg caggcgaaat tatcatcaac gacaactagt ttttcgatcc ggtgttgatg
      481 gagaaggcgt ttggcttctt ctaaatcaac accctcttca accgtcacca gcggcttgtc
      541 gtcactgtgg cgggtcatga gttcatagac tttttgtttg ggttcggtgg caaagcgaac
      601 atcgcggttg gtcaggatgc cgaccagttt actgtcgcct tcttcgacca ccggaaaacc
      661 ggaaaaaccg ttgtgattca tcagcgcctg agcgtcggag agtgtagcat tgggttcgat
      721 ggttattgga ttaaccacca taccggattc gaattttttt accttcttaa tttcggcggc
      781 ttgttcatca gcctcaagat ttttgtggat tactcctatg ccaccggctt gcgccatggc
      841 gatcgccagc gcgctttcgg tcacagtatc catggcagct gataacagcg gaataccaag
      901 ctcaatcgat ttggtcagcc tagtctgtgt gttggtatgg gctggcaaga catccgatgc
      961 tgcaggttca agcaatacat cgtcaaaggt aaggccgtcg gggatttcca tgccatctcc
     1021 acttcttgag ttggcaacgc atcatacaga gaaagtctat aaagccaagt cgctatgtgg
     1081 agaattggaa aagttattaa aaccaaacgt ttgtcagctt aatcggtgtt tccgccgcga
     1141 tagttttggg cgacaacaaa catttccgcc gactcgttgc ggctcgatgg aggcttggca
     1201 tggtggactt tggcgaatgt gcgtttcatg tcagccagca aggtctgttc cgtgccgcct
     1261 tgaaagacct tcgagacaaa acaaccccct ggggcgagca cttctgtggc aaatttataa
     1321 gcggcttcga ccaagcctat gacacggaga tgatcggttt ttggatgacc agtgattttt
     1381 ggcgccatat cgctaagcac ggcatcagcc ggaccaccta aagttttttt tataatttcc
     1441 ggcgcttcgt cgtccataaa atccagcagt acgactttgg cgcccggcaa cgagtccatt
     1501 tcggttaaat caatggcgat gatcttggct ttcgagtccg gcttttctgt gccgactcgg
     1561 ctcaccagga cttgggtcca gccgccgggt gcggcaccca actcgacgat acgcatatta
     1621 ggtttgagga atttaaattt atcgtcaagc tcttcaagtt tgaaagccgc ccgcgatcgc
     1681 aatccggcac gcttcgcggc ggctacataa ggatcattta attgccgctg gagccagcgt
     1741 gttgacgaac ctttacgtcc ctttgcggtt ttgactcgaa ctttaaggtc acgcccgccc
     1801 cggcctgatt tattgccgga agactgcttt tttgctctgg gattcgtgcc tccaggcttt
     1861 ttgctcactg agctggcctg atttctgcgt tgtgttgata attggcggct ggattaccta
     1921 acaccggcac accattattg atcatcaact cgagcagcat accttcacgc aaaccccgat
     1981 cggcaacccg tagctggcca actggccaag tctggcaaat ggcttccaaa attgcgcagc
     2041 cgggaataac cagttcggcc cgttcattac caatgcaggg tatttcagag cgtccgtcat
     2101 aatcgagttt ggtcaatttg ttagtagcat tgttgagatc attgaaggta aggtcgaggc
     2161 catcgatcaa taacctatta tattgatcta actccaaatg caccgcgccc aaagtcgtaa
     2221 ccgttcctga tgtgcctaac atttgaacat tgttggcggt aa
//
LOCUS       DASCNL010000688         4951 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001393690, whole genome shotgun sequence.
ACCESSION   DASCNL010000688 DASCNL010000000
VERSION     DASCNL010000688.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4951)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4951)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4951
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001393690"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="QF359_09170"
     CDS             <1..406
                     /locus_tag="QF359_09170"
                     /inference="COORDINATES: protein motif:HMM:NF015883.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87119.1"
                     /translation="VIKDDNGQVTELRCSYDPATKGGNAPDGRKVKATLHWVSAEHAI
                     DAQIREYEHLFTTKIPGADGEFLNDINPDSLTIVENCKLEPALQDASEGETVQFERVG
                     YFCLDKDTSTEKMIFNKTIGLRDTWARTQAKS"
     gene            424..849
                     /locus_tag="QF359_09175"
     CDS             424..849
                     /locus_tag="QF359_09175"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HJO87120.1"
                     /translation="MAKKIEHLQWPDAPDMWMPYAPAIKVTSGSTIYCAGVTAAPVYH
                     HHPHRPEEFDDMPNDMEGQARAVMENLRRGLEAAGATFADVIVCDRFLTDMEQQDDLN
                     KVWNEYFTDHSPASTTVQIVRLATDPRCLLEVNAIAVID"
     gene            complement(846..3218)
                     /locus_tag="QF359_09180"
     CDS             complement(846..3218)
                     /locus_tag="QF359_09180"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HJO87121.1"
                     /translation="MSEIPVKQKDDWTRRLALGMAFILVLMGMANNLPNIPGLLEAVQ
                     SIPGLAELPRLSKYNSEFFFPLAFAFMMIIGLLTSSFARDWKPQGNGKYAAGVALDLL
                     MLSIIIGVAIVYLIENEQVCLIDTLNGDRARFMAENLARAAEYEAIFGTPPDEDFPDC
                     VSNLGAWILPFLVLTIAVFFIYIIKVWGFPIVAVAIAIALYTLISSAAWYFDWTDNRY
                     LTTSIGTVVDGVRNVSAGVVGARNSIILESNGILGQFLNITVNVVFPYVVLGSLFGAS
                     AGGRSLIKMAVVITRKLRGGPAHAAIVGSATFGTISGGPVVNVLGTGTLTIPMMMKTG
                     FKPTFAGGVEAAASSGGQIMPPVMGIAAFVLAALSSVPYSEVIVAAFIPALAYFFSLF
                     LMVVFESRRMKIEAVRVLTEEQKLTREDKKNLLMIAGPILVILILLLSTKDNVGTGFS
                     AFLFGYDKASGDPLPWLLQVYQNAAGDPDSAGFWAVFVLVILLFLDPEIRQAPSKVIR
                     ALADAGIIIGELFLLLVAVSVIDVCISFTNFTGILTIDVLNWLRSVSTFSFFGNEFTI
                     GGSLYLMLALVVTMFATILLGMGMPTLPAYVNVILIIGPLLAALGTSFFTAHMFVFYF
                     AVASAITPPVAIAAFAASTISKADPLATGFAAVRAGIVMFTIPFVFAFYPEILLIEQA
                     QIMQSLDGGVSTEKNYLPGYDGTIHMAALSWLLFKMAIVLYLVASALSRQDKFGLSIM
                     EILLRFLLALLILLKMPFIANTALVVAGVYLAFHHFGGTKLLMRKQAPED"
     gene            complement(3346..4392)
                     /locus_tag="QF359_09185"
     CDS             complement(3346..4392)
                     /locus_tag="QF359_09185"
                     /inference="COORDINATES: protein motif:HMM:NF028178.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HJO87122.1"
                     /translation="MKKLLLAGAAALMLTSAAQAQGVKLTSASASPGGASDISARFLA
                     EVAAADKVATIQVQGGQVLTKTMVQVAQGKNDITASAFILNFLMSRGLGPYSGLGKEK
                     GKVLAGNLQLLFPFHLAHFVLVSFQTSGIDSYAKLKGKKVHNGPPRGGALVTARSVIR
                     LSSGGLVDGKGYIGKQVAWGQANSIFLDGSVDAAVRPATNPASWMPIYMAAGKLNMVS
                     VPKKLFEGKAWTKYTNAPGNVPTVFPISDLAHYGPNVRIISDDNMFRTVSNAGGTMVN
                     KSMGKKLAKALTASFIKHLPDLYRKTAFARTSQFGNVADKNFNFCRAGIKFHPGAVEA
                     WEEAGHKIIACAKP"
     gene            complement(4600..>4951)
                     /locus_tag="QF359_09190"
     CDS             complement(4600..>4951)
                     /locus_tag="QF359_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019085260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HJO87123.1"
                     /translation="TGDVCNKIGTYLKALAAHDNSVPFYVGLPSPTIDWTVEDGVRDI
                     PIEERDATEVTMMVGKDKSGVVSEVQITPDGSPAANYAFDVTPRRLVTGLITERGVSD
                     ASADGLKKLFPEFM"
BASE COUNT         1447 a         1230 c         1156 g         1118 t
ORIGIN      
        1 agtaatcaaa gatgacaatg gtcaggtaac cgagctgcgc tgctcctatg atccggcaac
       61 caagggcggc aatgcgccag atggccgcaa ggttaaagca acgctccatt gggtttcggc
      121 tgagcacgcg atagacgccc aaattcgcga atacgagcat ttgtttacga ctaaaattcc
      181 gggtgcagat ggtgaattcc tgaatgatat caacccagac tcattaacga tagtggagaa
      241 ctgcaaactt gaacccgctt tgcaagatgc aagcgaaggt gaaaccgtac aatttgagcg
      301 cgtcggctat ttctgtttag ataaagatac gtcaactgag aaaatgatct ttaacaaaac
      361 catcggcctc agagacacct gggcaagaac tcaagcaaag agttaaatta gaggaaaatt
      421 aaaatggcga agaaaatcga acacctgcaa tggccggatg caccggatat gtggatgcca
      481 tatgcgccgg caattaaagt caccagcggc tcgaccatct attgcgccgg cgtcacggca
      541 gcaccggttt atcatcatca tccccaccgt ccggaagaat ttgatgacat gcctaatgac
      601 atggaaggcc aggctcgcgc cgtgatggaa aaccttagaa gaggattgga ggcagccggc
      661 gctacatttg cggacgtcat tgtatgtgac cgatttctaa ccgatatgga acagcaggac
      721 gatttgaaca aagtatggaa tgaatatttt accgaccaca gcccggcttc gacaacggtt
      781 caaattgtgc gtcttgccac tgatccccgc tgcctgttgg aggtcaacgc aatcgcggtt
      841 atcgactagt cttcaggcgc ttgttttcgc atcagtaact tggtgccgcc aaaatgatgg
      901 aaggcgagat agacgccagc gacaacgagc gcagtattgg caatgaaggg catcttcagc
      961 aagatcaaca gagcgagcag gaaccgcaat aatatttcca ttattgaaag gccgaactta
     1021 tcctgccgac tgagagcact ggccaccaaa taaagaacga tggccatctt aaacagcagc
     1081 cagcttaaag ccgccatgtg gatggttcca tcataacctg gcaagtagtt tttctctgtg
     1141 ctcacaccgc cgtccaaaga ctgcatgatc tgagcctgct cgatcaatag tatctcaggg
     1201 taaaaggcaa agacgaacgg aatggtaaac ataacaatgc cagcccggac tgcggcgaaa
     1261 cctgtcgcca gcggatccgc cttagagatg gttgacgccg caaacgcggc gattgccacc
     1321 ggcggggtaa tggccgaagc aaccgcaaaa taaaacacaa acatgtgggc ggtgaaaaag
     1381 gatgttccta gagcagccag caatgggccg ataatcaaaa taacgttcac ataagccggt
     1441 aaggtaggca tgcccatacc gagcaagatc gtcgcaaaca ttgtcacgac gagggccagc
     1501 atcaggtaaa gggatccgcc aatggtaaat tcgttgccga aaaatgaaaa cgtcgaaaca
     1561 gacctgagcc aattcaacac atcgattgtc aagataccgg tgaagttggt gaagctaata
     1621 cagacatcaa tgaccgaaac ggcaaccaac aacaagaaca actcaccaat aataatgcca
     1681 gcatcggcta aggcacggat aactttactt ggtgcttgtc gaatttcagg atcaaggaac
     1741 agtaagatta ccaacacaaa gaccgcccaa aaaccggctg agtccggatc gcctgcggcg
     1801 ttctggtaga cctgaagcag ccacggtaaa ggatcgccag atgctttgtc ataaccaaac
     1861 aaaaacgctg aaaaaccagt accaacgttg tccttggtac ttaaaagcaa aatcaaaata
     1921 accagaatag gtccggcaat catcagcagg ttctttttgt cttcccgcgt caacttttgt
     1981 tcttcggtca acacacggac ggcttcgatt ttcatccggc gagattcaaa aacaaccatc
     2041 aggaacaggc taaagaaata ggcgagcgcc ggaataaaag cggcaacgat aacttctgaa
     2101 tagggcacgg atgaaagcgc cgccaagacg aaagccgcaa tccccatcac cggcggcata
     2161 atctggccac cacttgaagc cgcggcttcg acgccaccgg caaaagtcgg tttaaagccc
     2221 gttttcatca tcattggaat ggtgagcgtg cctgtaccga gcacattgac cactggcccg
     2281 cctgaaatgg tgccaaaagt cgccgaacca acaatggcgg catgggccgg accacctcgc
     2341 aatttgcggg taatcaccac ggccattttg atcaaggagc gaccaccggc agaggcgcca
     2401 aacaatgatc ctagcacaac gtacgggaac acaacgttca cagtaatatt gaggaactgg
     2461 ccaagaatgc cattcgattc aagaataata gaatttctcg cacctacaac accggcggaa
     2521 acattccgca ccccatcaac cactgtgccg attgatgtgg tcagatacct gttgtcggtc
     2581 caatcaaagt accaggcggc ggatgaaatc aaagtataga gcgcgatggc gattgccact
     2641 gcgacaatcg ggaagcccca aaccttaata atatagataa aaaagacagc aatagttaaa
     2701 accaaaaacg gcaaaatcca tgcgccaaga ttactcacac agtcgggaaa atcttcatca
     2761 ggcggagtgc cgaatattgc ctcatattcc gctgcgcggg ccaagttttc cgccataaaa
     2821 cgtgctcgat caccattgag agtatcgatc aggcaaactt gctcattttc gattaagtaa
     2881 acgatggcga caccaataat gatgctgagc atcagaagat cgagggcgac gccagcagca
     2941 tattttccat tcccctgcgg tttccaatcc ctggcaaagg acgatgttaa aagaccaatg
     3001 atcatcataa aggcgaaggc gagcgggaaa aagaactcag aattatactt gcttaaacgc
     3061 ggcagttccg cgagccccgg aatcgattgc acggcttcta gcaagccagg aatgttgggc
     3121 aaattgttcg ccatacccat gagcacgagg ataaaggcca tcccaagcgc tagccgcctc
     3181 gtccaatcgt ctttttgttt cactggaatt tctgacatgc caattattag ctctttaagt
     3241 actgtatctg cttaatgaca gattttttta tttttcttga taaacaagag ccggagaact
     3301 atttgcgctc cggctctcac aataacgtat tacctgatcg aggttctaag gctttgcgca
     3361 ggcaatgatt ttatgcccag cttcttccca agcctcgaca gcaccaggat gaaatttgat
     3421 cccggctcgg cagaaattaa agttcttatc tgcaacgttg ccaaactgtg aagtcctggc
     3481 aaaagccgtt tttctatata gatccggcag gtgttttata aaggatgctg tcaacgcctt
     3541 ggccagtttt ttacccatac tcttattgac catagtgcca ccagcattgg agaccgtccg
     3601 aaacatatta tcgtctgaga taatacggac attcgggcca taatgggcaa gatcggaaat
     3661 tggaaaaacg gtaggaacat tgccaggggc gttggtgtat tttgtccaag ccttaccttc
     3721 aaataatttc ttcggcaccg aaaccatatt gagtttaccg gctgccatat aaatcggcat
     3781 ccaagaggcc ggatttgtgg caggacgtac agctgcatca accgacccgt ccaagaaaat
     3841 agaattggct tgcccccaag caacctgctt gcctatataa cctttaccat ccactaatcc
     3901 accggagctt aagcggatga cacttcgcgc cgtcaccagt gcgccacctc gcggcggacc
     3961 attatgtact tttttccctt tgagcttggc atagctatcg atacccgagg tttgaaaaga
     4021 gaccaaaaca aagtgggcaa ggtggaaagg aaaaagcaat tgtagattac ctgccaatac
     4081 cttgcctttt tctttaccga gaccagaata gggacctaaa ccccgggaca ttagaaaatt
     4141 aaggataaag gcactcgccg tgatgtcgtt cttgccttgg gcaacctgaa ccatggtttt
     4201 ggttaaaact tgtccgcctt gcacctgaat tgttgcaact ttatcagcgg cggcgacttc
     4261 tgctaggaat ctagcggata tatctgaggc gccacctggc gaagcggaag cactggttaa
     4321 tttgacacct tgggcttgtg cggcgcttgt aagcatcaaa gcagccgctc cagctaacaa
     4381 taactttttc atgagatttt ccttcctgtt taaaattata tgtttttgca cgttattttt
     4441 gcacgttatt ttatgtgctt actttaaaat cctaacatat gggatttttc gagtcttgaa
     4501 agaaattcta ataattactc aaaaatataa cttatgttga gatgtccaac ctatagacac
     4561 ttaagatttg tgcggcatca ataagtttgg gctattgcgt cacataaact cgggaaaaag
     4621 tttttttaaa ccatcggcac tggcatcact gacaccgcgc tcggtgatca gccccgtgac
     4681 caggcgccgg ggcgtcacat caaaagcgta attggccgct ggcgagccgt caggggtgat
     4741 ttgaacctcg gaaactacac cggacttatc cttaccgacc atcatcgtga cttcggtggc
     4801 gtcgcgctct tcgattggaa tatcgcgcac accatcctcg accgtccaat ctatcgtcgg
     4861 cgacggcagg ccgacataaa acggcacgct attgtcgtgc gctgccagtg ctttcagata
     4921 agtaccgatt ttattacaaa catcgccggt a
//
LOCUS       DASCNL010000689         1858 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001394207, whole genome shotgun sequence.
ACCESSION   DASCNL010000689 DASCNL010000000
VERSION     DASCNL010000689.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001394207"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..691)
                     /locus_tag="QF359_09195"
     CDS             complement(<1..691)
                     /locus_tag="QF359_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HJO87124.1"
                     /translation="MARNKIALVGAGNIGGTLAHLAGLKELGDVVMFDIVKGLPQGKS
                     LDLAESSPVEGFDAKMVGANGYGAIKGADVVIVTAGVARKPGMSRDDLIGINTSVMQS
                     VGEGIKQNCPSAFVICITNPLDVMVGVLRDACGLPHNKVVGMAGVLDSARFRYFLAEE
                     MKVSVEDVTAFVLGGHGDSMVPSVRYSTVAGIPLTDLVKMKWITQKKLDEIVQRTRDG
                     GAEIVGLLKTGS"
     gene            complement(1019..>1858)
                     /gene="zapE"
                     /locus_tag="QF359_09200"
     CDS             complement(1019..>1858)
                     /gene="zapE"
                     /locus_tag="QF359_09200"
                     /inference="COORDINATES: protein motif:HMM:NF015902.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HJO87125.1"
                     /translation="RRVHFHAFLQNVHNRFNDFRENNSEGGDPIPSVAAAIADEAWLL
                     CFDELQVVNIVDAMILGRLFEGLLERDVVIVATSNRPPGDLYKDGLQREKFLLFIDLI
                     YEHLDILQLGAARDYRLERMLGMQVFHQPLDDEAVKDLDQYFADLTEGYTAAPDKIEV
                     KGRIVEIPLVAAGVGRTSFNSLCAEALGPADYLEIAKRYHTLILDDIPRMDEALKSEA
                     QRFITLIDALYENKVNFICSADAPPDELYVLGEGAFEFERLVSRLMEMQSEEYLALPH
                     GAV"
BASE COUNT          510 a          514 c          394 g          440 t
ORIGIN      
        1 cagaaccggt tttaagcaaa ccaacgattt cagcaccacc atcacgggtg cgttgcacga
       61 tttcgtcaag ttttttctgg gtgatccatt tcattttaac cagatcggtg agcggaatac
      121 cggcgactgt tgaataacgt accgacggca ccatactgtc accatgaccg cccaaaacga
      181 atgccgttac atcttcgacg gacaccttca tttcttcggc caagaaataa cggaagcggg
      241 ctgaatcaag cacgccggcc ataccaacga ctttattatg cggcaagcca caggcatcac
      301 gcaacacgcc gaccatcacg tcgagcggat tggtaatgca gataacgaaa gcgctcgggc
      361 aattttgttt aataccttcg ccaacagatt gcatcacact ggtattgata ccgatcagat
      421 cgtcgcggct catgccaggc ttgcgggcaa cgccggctgt cacaatgaca acatcagcac
      481 ctttaatcgc gccataacca ttagcaccga ccatttttgc atcgaagcct tcaactggcg
      541 agctttccgc caaatccaat gatttacctt gggggagacc tttgacgatg tcgaacataa
      601 cgacatcacc caactctttt aaaccggcca aatgagccag cgttccgccg atattgcccg
      661 caccaacaag cgcaatcttg tttcttgcca taaatctttt tcctctctta acggcttgtt
      721 ttggaccgtt caactgcaac cgctttatat gcatcaattt cgctcgttat tgagcgcttt
      781 aatatgtccc ggctacgtag cgcataatag gtttgagagc aagacctaga acccctaact
      841 cctttaagac attgaagaat ttaagccacc tccttgaatc cgcctcactt tcattcgtca
      901 ccgaaccaca aaccggcgag gaaagccact gcgtcacact catatgatca gatattaata
      961 aaactgtgaa atttcaaaag ggtaagtggt aaaaaacgag attaggtagc tttttcacct
     1021 ataccgctcc atggggcaaa gcgagatact cttctgactg catttccatc aaccgcgaaa
     1081 ccaggcgctc gaactcaaaa gcgccctctc ccaagacgta taattcatcg ggtggtgcat
     1141 cggccgaaca aatgaaattg accttgtttt catagagcgc atcaatcaag gtaataaacc
     1201 gttgcgcctc gctttttagg gcctcatcca tgcgcggaat atcatccagg ataagcgtgt
     1261 gataacgctt cgcgatctca agataatcgg ccggacctaa ggcttcagcg cataaactat
     1321 taaagctggt tcgcccaacc ccagccgcca ccagcggaat ttcaacgatc cggcctttga
     1381 cttcaatttt atctggtgca gcggtgtagc cttcggtcag atcagcaaag tattgatcca
     1441 agtctttaac cgcctcgtca tccagcggct gatgaaagac ctgcataccg agcatacgtt
     1501 caagccggta gtcgcgcgcc gcgcctaatt gcagaatatc caaatgctcg tagattagat
     1561 caataaagag cagaaatttc tcgcgctgca ggccatcttt gtaaagatca ccgggtggac
     1621 ggttggatgt cgcgacgatc accacatcac gctcaagcag gccttcaaac aagcgtccta
     1681 aaatcatcgc atcgacaatg tttaccacct gcaactcatc gaaacacagc agccaggcct
     1741 cgtcggcaat tgcagcggcg acgctaggga tcgggtcacc accttcgcta ttgttttccc
     1801 gaaaatcatt aaaccggttg tgaacgttct gcaaaaatgc atgaaaatga acccggcg
//
LOCUS       DASCNL010000690         1800 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001396667, whole genome shotgun sequence.
ACCESSION   DASCNL010000690 DASCNL010000000
VERSION     DASCNL010000690.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001396667"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="QF359_09205"
     CDS             <1..603
                     /locus_tag="QF359_09205"
                     /inference="COORDINATES: protein motif:HMM:NF024989.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HJO87126.1"
                     /translation="HVGVAMDALATPYKVLRRTRIRPGETVVVFGAGGGLGIHQLMMA
                     KWANARVIAVDTKASKFDTCREAGADDVVDASSENVVEALMDLTGGHGVDVAVDYVSA
                     KVTLEQAVQSLGKHGRMVTLGGAGETFEVKASHLLAKEIDVLGSRYVSPLEILETYDL
                     MVRKEVWPIVTEIRPLEEAEIVHELVEKGKVTGRAALLIG"
     gene            complement(689..1702)
                     /locus_tag="QF359_09210"
     CDS             complement(689..1702)
                     /locus_tag="QF359_09210"
                     /inference="COORDINATES: protein motif:HMM:NF012335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HJO87127.1"
                     /translation="MKAALLNGPSDVTITDRATPASGEGQVLVRITHVGICGTDTKIY
                     DGGILANYPVVMGHEGVGEIIEGQAADGSGPGNRVIIDPVLYCGNCFYCARGDTHLCE
                     NGGMLGREVDGVYTENYLAPAGNVFALGDNINMTEGPLIQVMTTVLHAQNRANIQADE
                     VVVVLGLGVTGLLQIQVAKALGAKAVVGVSRNAHKRGLAEQMGADCVVEHGEAAKVAV
                     LKLTDGRGADVVIEAVGYISVLAEAMDLARFGGRIIPFGIYAALEGKLPFYELYFKEL
                     DLINTRAALPSDFPASIKLVEEGKVNLAPFITHTYPLEELTEAIKLLMEPSDERLKVI
                     LEV"
BASE COUNT          420 a          498 c          466 g          416 t
ORIGIN      
        1 catgtcggcg tcgctatgga tgccctggcg actccctaca aagttttgcg ccgcacccgc
       61 attagacctg gcgaaaccgt ggttgtcttt ggcgccgggg gcggcctcgg tattcatcaa
      121 ttgatgatgg cgaaatgggc caatgcacgg gttattgccg tcgataccaa agccagcaaa
      181 ttcgatactt gccgggaagc cggtgccgac gacgtggtcg atgcttcgag cgaaaatgtg
      241 gtcgaagcat tgatggatct caccggtggc cacggcgtcg atgttgcagt tgattatgtt
      301 tccgccaagg tgacgctgga gcaagcggtg cagtccctcg gcaaacatgg ccgcatggtg
      361 acacttggcg gtgcgggtga aaccttcgag gttaaggcta gccacctgct cgccaaggaa
      421 atcgacgtgc tcggcagccg ctatgtctcg ccactggaaa tcttggagac ctatgacctg
      481 atggtgcgga aagaggtctg gccgattgtc accgaaatcc gtcccctgga agaagctgaa
      541 attgtccacg aattggttga aaaaggcaag gtcactggcc gcgccgcgtt attgatcggc
      601 tagttgcaaa cggctgcgat tccggtactg ggtaccagat ccgcaacaac taccctctaa
      661 tttcaagtcc ggtacccggt accttggact atacttccag aattactttc aatcgttcgt
      721 cgctgggttc catcaacagc ttgatcgcct cggtgagctc ttccaatgga taggtgtggg
      781 tgatgaatgg cgcgaggtta actttaccct cttcgaccag cttaatgctg gctggaaaat
      841 cactaggcag cgcggcgcga gtattgataa ggtcgagttc cttaaagtaa agttcataaa
      901 acggcagctt gccttcgagc gcggcataga tgccgaatgg aataatgcgt ccaccgaagc
      961 gggctaaatc catcgcttcg gcgagcacgg agatataacc aaccgcttcg atcaccacat
     1021 ctgcaccacg gccatcagtt agttttaaaa ccgccacttt agccgcctca ccatgttcaa
     1081 cgacacaatc ggcgcccatt tgttccgcca gaccacgttt atgagcattg cgtgaaacgc
     1141 caacaaccgc tttggcacca agcgcctttg ccacttgaat ttgcaacaac ccagtaacgc
     1201 caaggcccag cactacgaca acttcatcgg cttgtatatt ggcgcgattt tgagcgtgga
     1261 ggaccgtcgt catcacctgg ataagcggcc cctcggtcat attaatgttg tcaccgaggg
     1321 caaacacatt gcccgccggg gcgagataat tctcagtata aacgccgtca acttcacgtc
     1381 ccagcatccc tccattttca caaagatggg tatcacctct agcgcaataa aagcagttcc
     1441 cacaatagag caccggatca atgatcacgc gattacctgg gccactgcca tcggcggctt
     1501 ggccttcgat aatttcaccc accccttcat gacccataac gacgggataa tttgctagaa
     1561 taccgccatc ataaatttta gtatcggtgc cgcaaatacc gacatgggtg atccgcacca
     1621 ggacctgacc ttcgccgctg gccggggtgg cgcgatccgt tatcgtaaca tcgctgggtc
     1681 cgttaagaag ggctgctttc atttaattac tctcacaata gtttatctaa tctggcacta
     1741 agttccgcca tgcggtgggc tgctgtttgt tcagccagga accgctgacg tgcggctcgg
//
LOCUS       DASCNL010000691         1710 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001397755, whole genome shotgun sequence.
ACCESSION   DASCNL010000691 DASCNL010000000
VERSION     DASCNL010000691.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001397755"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1616
                     /locus_tag="QF359_09215"
     CDS             <1..1616
                     /locus_tag="QF359_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJO87128.1"
                     /translation="FALGYAHRVVDSKKLAFATIIVVCGLTGVATWAFLPKLEYLPEG
                     NRNLIIARIATPPGYNLDAVREIAANTFQRLRPNLTSPDNMSQPADGPVKMSRFWFVI
                     RRGFTIAAGAAVDPTRTKELIPIIRRAIFQEPGSRGFVFQTSLFGRGFGGGRNINLDI
                     SGPDLNDVLEVAGRAFQTIARMFPRSQGNQVRANPGLQNASPEIRLVPDPRALSDNGM
                     TAKELGQIVDAFNDGMRVAEVTVGGNRMDLTLMGPDKHINRTENISNLPIVTRSGLVL
                     PASSLAKIVVTSSPDQIRHLERVRTVTLQIRPSRAVALEVAMEQVRHDVMDKLKAEGL
                     PPGISLAMGGTADALTKTFDSMMLNLFLALVIVYLVMAILFESFIYPFIIIFTVPLAT
                     AGGVAGLTILNSIRFQALDMLTLLGFVILIGIVVNNAILLVHQTLIHVREEGMNATDA
                     IMEATRNRIRPIFMSTLTSVFGMLPLAIFPGAGSELYSGLGSVVIGGLSLSAILTLLI
                     IPPLLSLFSFSLKPKHIEAPADVVNSPAE"
BASE COUNT          401 a          416 c          417 g          476 t
ORIGIN      
        1 gttttgccct tggctatgcg caccgcgtag tcgacagcaa aaaactcgca tttgccacta
       61 ttattgtggt ttgcggttta acgggggtcg ccacttgggc attcctgccg aagcttgaat
      121 acctgccgga aggtaaccgt aatcttatta tcgcgcgaat tgcgacaccg cccggctaca
      181 atctggatgc agtgcgcgaa attgcggcga atacgttcca aagattgcgg ccgaatttga
      241 cgtcaccgga taacatgtcc caaccagcag atggtccagt caaaatgagc cgcttttggt
      301 ttgttattcg gcgaggattt accatcgccg ccggcgctgc tgttgatccc acacgtacaa
      361 aagagctcat tccaattatc cgccgggcaa ttttccaaga acctggcagc cgcggttttg
      421 tcttccaaac gtctttattt ggtagaggtt ttggcggcgg ccggaatatc aatctcgaca
      481 tatcgggccc cgatttgaac gatgttttgg aagttgcagg tcgtgctttc cagactatag
      541 cccgcatgtt cccacgtagt cagggtaatc aggtacgcgc taatcctggc ttgcaaaacg
      601 cctcacctga gattcgtttg gtaccggacc cacgagcctt atccgacaat ggcatgaccg
      661 ccaaagagct tggccaaatt gttgatgctt tcaatgatgg catgcgggtc gctgaagtaa
      721 cggttggtgg taaccgcatg gatttaacct tgatgggccc agacaaacac atcaaccgga
      781 ccgaaaacat cagcaatctg cctattgtaa cgcggtcggg cctggtactg ccggcgagtt
      841 cgctggcgaa aatcgttgtt acctcgagcc cagaccaaat tcgtcaccta gagcgggtac
      901 gcactgttac gttgcaaatc cggccatcac gcgctgtcgc cttggaagtc gccatggagc
      961 aagtccgcca cgacgtaatg gacaaattga aagcggaagg attgccgccc ggcatatctc
     1021 tagctatggg tggtacagct gacgcgctga caaaaacttt tgatagtatg atgctgaatt
     1081 tatttctcgc tttggtcatc gtatatctcg tgatggcgat tttgttcgag agttttattt
     1141 atccgtttat tattattttc accgtgccac tggcgaccgc cggtggtgtc gctggactta
     1201 caatattgaa ctcgattcgt ttccaagcct tggatatgtt gactttgctt ggcttcgtta
     1261 ttttgatcgg tattgtcgtg aacaatgcta ttttactagt tcaccaaacg ctgatacatg
     1321 tccgtgaaga aggcatgaac gccactgatg caattatgga agcaacccgt aatcgcattc
     1381 ggcctatatt tatgtccacc ttaaccagtg tgtttggcat gttgcctttg gcgatattcc
     1441 caggcgccgg ctcagagctt tatagtggct tgggctcggt ggttattggc gggctatctt
     1501 tatcagcaat tttaacgctg cttattatac cgccgttact cagtctattt tcattctcat
     1561 taaaaccaaa acatattgaa gccccagctg acgtggttaa ctcgccagca gaataattga
     1621 taggaccaca aatgaatttt tccaatagcg attctaacgc tacctctaaa ttgtgtgcgg
     1681 ccagtggaat taatgtttta aaatcgatgg
//
LOCUS       DASCNL010000692         1206 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001398636, whole genome shotgun sequence.
ACCESSION   DASCNL010000692 DASCNL010000000
VERSION     DASCNL010000692.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001398636"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="QF359_09220"
     CDS             complement(<1..480)
                     /locus_tag="QF359_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87129.1"
                     /translation="MSTTAPNVSSDRDDVSAIGSGSTLASHSFEVSWFWRILPAGMRR
                     RWWLFRCFDLLVRYWPVFKRRQGLLVVRMDGIGDMVLFRRSLDEYADLFGVDKSNITV
                     LGCKSWGPIATEIFAGYRLFIIDEHAFARRFIYRFGIGFMVRQIAPAVTICDSYLRRA
                     "
     gene            complement(499..>1206)
                     /locus_tag="QF359_09225"
     CDS             complement(499..>1206)
                     /locus_tag="QF359_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HJO87130.1"
                     /translation="IRAAGVSFTTAPGENGAPTARCLICVTPDAERTMQTFLGACIDL
                     GPADVDDQVIGASKVVYLEGYLWDPPRAKEAFVKAAKTAEQAGRQVALSLSDPFCVDR
                     HRDEFLDLVDNHVNILFANEDEIKSLYQVGEFDDALQHVRGHCDIAALTRSSQGSVVI
                     ASDEVHVLNAEKVDHVVDTTGAGDSYAAGFLYGLTQGKDLASCGRMGGILAAEIISHY
                     GARAENNLKTVLNEKLK"
BASE COUNT          349 a          327 c          271 g          259 t
ORIGIN      
        1 tgcccgccgc agataggaat cacagattgt tacagcagga gcaatttggc gcaccataaa
       61 accaatgcca aaacggtaaa taaaccggcg ggcaaaggca tgctcatcaa tgatgaacag
      121 ccggtaaccg gcaaaaatct ccgtcgcgat tggcccccaa cttttacacc caagtaccgt
      181 gatattggat ttatcaacgc cgaacaagtc cgcatattcg tcaagggagc ggcgaaataa
      241 taccatgtct ccaattccgt ccatgcgcac taccaataga ccttgacgtc gtttaaaaac
      301 tggccaatag cgcaccagga gatcaaagca acgaaacagc caccagcgcc gccgcatacc
      361 agccggtaaa attcgccaaa accaggaaac ctcaaaggaa tggctggcta atgtagaccc
      421 ggaaccaatg gcgctgacat catctctatc agatgaaaca tttggtgcgg tagttgacac
      481 tgatagcgcc acgatcaatc acttcagttt ttcgtttagc acggttttga gattgttttc
      541 cgcccgggca ccataatgag aaatgatttc agcagccaaa ataccgccca tgcggccaca
      601 acttgccaag tctttacctt gcgtcaggcc atacaaaaat cctgcggcat aagaatcgcc
      661 cgcacccgtg gtgtcgacaa catggtctac tttttcagca ttcagcacat gcacttcatc
      721 actggcaata acgaccgagc cttgagagct ccgggtaagg gcagctatat cgcaatgtcc
      781 ccggacatgc tggagagcgt catcaaactc accaacttga tagagagatt taatttcgtc
      841 ttcattggcg aacaaaatgt taacgtggtt atcgaccaaa tcgagaaatt cgtcgcgatg
      901 gcgatcaaca caaaatgggt ccgatagact tagcgcaacc tgacggccag cttgttcagc
      961 tgttttagct gcctttacaa aagcttcttt tgctcgcggc gggtcccata gatagccttc
     1021 caggtaaaca acttttgaag cgccaataac ttgatcatca acatctgcgg ggccgagatc
     1081 aatacaggca cccaaaaaag tctgcatggt tcgctcagca tctggtgtca cgcaaatgag
     1141 acaccgggct gtcggcgcac cattttcacc aggcgccgtg gtgaacgaaa caccggcagc
     1201 acgaat
//
LOCUS       DASCNL010000693         2009 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001404221, whole genome shotgun sequence.
ACCESSION   DASCNL010000693 DASCNL010000000
VERSION     DASCNL010000693.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001404221"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /gene="rplJ"
                     /locus_tag="QF359_09230"
     CDS             <1..443
                     /gene="rplJ"
                     /locus_tag="QF359_09230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HJO87131.1"
                     /translation="YIGMTMPEMTDLRNRMREAGASFKVTKNRLTRLALQDTDFESLT
                     ELMTGPTALAYSADPVTAAKTAINYAKDNDKLVILGGVFNGQSLDVDDVKNLAKLPSL
                     DELRGKLVGMIQTPATRIAGVLQAPAGQVVRVIGAYGAKGDEAA"
     gene            487..864
                     /gene="rplL"
                     /locus_tag="QF359_09235"
     CDS             487..864
                     /gene="rplL"
                     /locus_tag="QF359_09235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HJO87132.1"
                     /translation="MADLEKIAEDLSALTVIEAAELSTMLEEKWGVSAAAPVAVAAGP
                     AGDTGGEEAAEKDVFEVVLAAVGDKKINVIKEARAIMGLGLKEAKDLVESAPATVKED
                     ATKEEAEEIKGKLEEAGATVELK"
     gene            1162..>2009
                     /locus_tag="QF359_09240"
     CDS             1162..>2009
                     /locus_tag="QF359_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HJO87133.1"
                     /translation="MANRTFTGRKRVRKSYGRIPTVTPMPNLIEVQKNSYESFLQREI
                     TKEDRTDTGLQEVFKSVFPIKDFSERGTLEFVDYEFEEPKYDVEECQQRGMTYAAPLK
                     VTLRLVVWDIDEETEARSVRDIKEQVVYMGEMPLMTDNGTFVVNGTERVIVSQMHRSP
                     GVFFDHDKGKTHSSGKFLFAARVIPYRGSWLDFEFDAKDLVYVRIDRRRKLPATTMLL
                     GLDNAATDAKRKRLAAKGEALDSLDAEGMTPEEILKFFYDTVDYVRAKKGWQIPLDAE
                     ALRGLKL"
BASE COUNT          519 a          456 c          531 g          503 t
ORIGIN      
        1 attatattgg gatgacaatg ccggaaatga ccgatcttcg aaaccgtatg cgcgaagcag
       61 gtgccagttt taaggtcact aagaatcgcc ttacgcgtct cgccctacaa gataccgatt
      121 ttgaatcctt gactgaacta atgacgggtc caaccgctct tgcttattcc gccgatccgg
      181 tgacagcagc gaaaacggcc atcaattatg ccaaggataa tgacaaattg gtcatcttgg
      241 gtggtgtctt caacggacaa tcactggatg ttgatgatgt caaaaactta gccaaactgc
      301 cgtccctgga cgagctacgc ggcaagcttg ttggcatgat ccaaactcca gctacccgga
      361 tagccggtgt gcttcaagca cccgctggtc aggttgtccg cgtgattggc gcctacggtg
      421 cgaaaggtga cgaggctgct tagcggcttt aagtaacaaa cagtttgagc caaaggagaa
      481 attattatgg ctgatttaga gaaaattgct gaggacctct cagctttgac cgtgattgaa
      541 gcggccgagt tgagcacaat gttagaagaa aaatggggcg tttctgccgc tgcaccggtt
      601 gcagttgcgg ctggccctgc tggcgatact ggtggtgaag aagcggctga gaaagacgta
      661 tttgaagtcg ttctggctgc tgttggtgac aaaaagatca acgtgattaa agaagctcgc
      721 gccatcatgg gtctgggctt gaaagaagcg aaagacttgg tcgaatccgc accagctact
      781 gtcaaagaag acgctactaa agaagaggcc gaagaaatta aaggcaagct tgaagaagct
      841 ggcgctacgg tcgaacttaa ataaggttta tctgctgaca ttatatatgt gtcggtagcg
      901 ttatccgcga tattaggcgg cttgtttact aaatcagccg cccgatatcg aacatataga
      961 atacacatct gccacggatg ggtcctgccg cgaccgagat agtggatgtg caattccggc
     1021 attacctgct cattaacaga gcgcgtgtgc ctttttgctt ctctgctgga ttgtccggtg
     1081 gaggcggtgt ccggttcttc gcccaatgcg gcgattggaa gaagttcggg acgtagtgat
     1141 ttatagctac gaggggctgc aatggctaat cgcactttta ctggtcgtaa acgcgttcga
     1201 aaatcttatg gacgtattcc tactgttaca ccaatgccga accttattga ggttcaaaaa
     1261 aattcatatg agagtttcct gcaacgggag atcaccaaag aagaccgcac cgatacaggt
     1321 ctccaggaag ttttcaaatc cgtctttccg attaaggatt tctccgaacg gggaaccctg
     1381 gaattcgttg attacgaatt cgaagagccc aaatatgacg ttgaagagtg tcagcaacgg
     1441 ggcatgacct atgccgcgcc gttgaaggtg accctccgtt tggtggtttg ggatatcgac
     1501 gaagaaaccg aagcccgttc ggtgcgtgat attaaggaac aggtcgtcta tatgggtgaa
     1561 atgcccttga tgaccgataa tggcacgttt gtcgtcaatg gcaccgagcg cgtcatcgtt
     1621 tctcaaatgc atcgttcgcc gggcgtgttc tttgatcacg ataaaggtaa aacccattcc
     1681 tctggtaaat ttctgtttgc cgcccgagtt ataccctacc gtggttcttg gctcgatttt
     1741 gaattcgatg ctaaagattt agtctacgtg cgtatcgatc gccgccgtaa attaccagca
     1801 accaccatgt tgctgggact tgataatgcg gcaactgatg ccaaacgtaa aagactggcg
     1861 gccaaaggcg aagcgcttga ttcgcttgac gccgaaggta tgacgccgga agaaatcctt
     1921 aaattctttt acgataccgt cgattatgtt cgggcgaaaa aaggctggca aattcccctt
     1981 gatgccgaag ccttgcgtgg cctgaaact
//
LOCUS       DASCNL010000694         1414 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001404411, whole genome shotgun sequence.
ACCESSION   DASCNL010000694 DASCNL010000000
VERSION     DASCNL010000694.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1414)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1414)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001404411"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(157..399)
                     /locus_tag="QF359_09245"
     CDS             complement(157..399)
                     /locus_tag="QF359_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87134.1"
                     /translation="MLGFSLPKLIVLVVIIAAIWYGFKLYSRGQSLTKTNQPGDDTDS
                     VIPDAVDMVKCATCGDFVPVKDARSCGKEGCPYPGS"
     gene            complement(463..1359)
                     /locus_tag="QF359_09250"
     CDS             complement(463..1359)
                     /locus_tag="QF359_09250"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HJO87135.1"
                     /translation="MTYLSPMIRKYLEKWRVPGFRNPKPVVAVVRLSGVISDRSGISR
                     SGLSAAGLVTVLETAFKMPNLKAVALAINSPGGSPVQSSLIGKRIRALAEEHEVPVIA
                     FAEDVAASGGFWLACAADEIYADDSSVIGSIGVISAGFGFQNAIKKLGVERRVYTAGE
                     MKSTLDPFLREKPDDIERLAELQHDVFNAFKEMVRERRKDKLNASEDELFTGAFWTGR
                     RALEMGLIDGLGELTSVMQERYGDKVRFRPVEQRQNWLKQKLGFGMTNRNWPAPKGAM
                     SSIVDEVLVAIEERGLWNKFGL"
BASE COUNT          364 a          388 c          342 g          320 t
ORIGIN      
        1 ctggaaaatt gagggctatt ataaaggcta gctcgaggac ggcgttggca ctgctttcag
       61 gccgacaatt tcagtataaa atttgatggt agcgttctta atccgcggtc gccatggcga
      121 catgatgcat atcgatgata tcagacatca aagcgttcaa ctcccgggat aaggacagcc
      181 ttctttaccg caagatctcg catctttcac cggcacaaaa tcaccacagg tcgcacattt
      241 aaccatatca acggcatctg gaatgacact atcggtatca tcgccaggct ggttggtttt
      301 ggtgagactt tggccacggc tataaagttt aaagccgtac cagatcgctg caatgatgac
      361 gacgagaacg attaattttg gtaaactgaa tccaagcatg gtcaaggttg tagagggaga
      421 aggtttgcca ggtcaaccat ttagacagca gttaggcggt atttagaggc caaatttgtt
      481 ccacagccca cgctcttcaa tcgccaccag aacttcgtca acgatagaag acattgcccc
      541 cttgggggcc ggccaattcc ggttggtcat gccaaagcca agtttttgct taagccaatt
      601 ttgacgctgc tcgaccgggc ggaaccgtac cttatcgcca taacgttcct gcatgacaga
      661 agtcagctca ccaagtccat caattagccc catttccagc gcccggcgac cggtccaaaa
      721 ggcgccggta aacagctcgt cttcggaggc gttcagttta tctttacggc gctcacgcac
      781 catttcctta aacgcattaa agacgtcgtg ctgcagctcg gccaggcgct cgatatcatc
      841 cggcttttcg cgtaagaatg ggtcgagggt cgatttcatc tcgcctgcgg tatagacccg
      901 gcgctcaaca cccaattttt taatcgcgtt ttgaaagcca aagcccgccg atattacacc
      961 gatcgagcca atcacggacg aatcgtcggc gtatatttca tccgccgcac aggccagcca
     1021 aaagccgccg gaggctgcaa catcttcggc aaaggctatc accggcactt catgttcctc
     1081 agctagcgca cggatgcgtt taccgatgag cgaagattgc accgggctgc cgccaggtga
     1141 attgatcgcc agcgcaacag ctttgagatt gggcatttta aaagcggtct ccaggaccgt
     1201 caccaaccca gccgccgata atccagaacg gctaatgcca gagcggtctg aaatcacgcc
     1261 ggaaagccgc accacagcta ccaccggctt gggattacga aagcccggca cccgccattt
     1321 ttctaaatat tttctaatca tgggactaag gtaggtcacg aatccagggg tcgcaagggc
     1381 agttataact ttaaagcccc agcttcacgc aaaa
//
LOCUS       DASCNL010000695         2080 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001408773, whole genome shotgun sequence.
ACCESSION   DASCNL010000695 DASCNL010000000
VERSION     DASCNL010000695.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2080)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2080)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2080
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001408773"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1043
                     /locus_tag="QF359_09255"
     CDS             <1..1043
                     /locus_tag="QF359_09255"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87136.1"
                     /translation="VIQLGLILFILVSLAWGFLFYTDTLEMWHAVVLLIIHGVAGVFW
                     GPAANMMVHDIVGNEQLQSGVRLSATSRTLGVLMGPAIGGGLLLLVGPAWGIIINAAI
                     YLPYVLWLIKAPYGHAYRRKIGDIDHAAPPPRAIKGFADIIQTFKEVAGNRVIVSMTL
                     LAGAASLLVGNTYQPLMPGFARDLGATEATFFYSALLTASAAGALAAGIILEMKSLML
                     PQARTAFRQVIIWCILMGGFAFATNFYLALILLFAAGFLELSYKSMTQTLVQLRAPVE
                     IRGRVIGLYSSSSLGLITFSGVTVGFGAELIGIHWSLGLSSMALLIVMISLYTYSEIK
                     KRAKEAVETAAE"
     gene            1232..1307
                     /locus_tag="QF359_09260"
     tRNA            1232..1307
                     /locus_tag="QF359_09260"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1266..1268,aa:Glu,seq:ctc)
     gene            complement(1310..1987)
                     /locus_tag="QF359_09265"
     CDS             complement(1310..1987)
                     /locus_tag="QF359_09265"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF001453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HJO87137.1"
                     /translation="MTKSYEKMSHRLMSELQESVRTAERWTGRTVLSEQVRAALQSVP
                     RHLFVDDENTPLAYANRPLPIGYGQTISQPTVVAIMTDLLDIQNSDRVLEIGTGSGYQ
                     TAVLAEVAKQVYSVEVVPELAVAAKRRLGQLGYENIEQISGQGRDGWRDQAPFQAIMV
                     TAAAEDIPITLINQLDRNGRMIIPIGPNGGPQNLIRICKDHAGNVTESPVLPVSFVPL
                     VQDLAIE"
BASE COUNT          451 a          551 c          537 g          541 t
ORIGIN      
        1 gagtcatcca attgggtctt attctattta tcctggtatc gctggcctgg ggattcttgt
       61 tttacacgga cacgcttgaa atgtggcatg cggttgtgct gctgatcatt catggtgttg
      121 ccggggtgtt ctggggaccg gccgctaata tgatggtcca cgacatcgtt ggcaacgaac
      181 aactgcaaag cggcgtcaga ttgtcggcga cgtcacgtac gctcggcgta ttaatgggcc
      241 cggcgattgg cggcgggctt ttgctgttag tcggccccgc ctggggcatc attataaatg
      301 ccgcgattta cctgccctat gtgctgtggc tgataaaagc accttatggc catgcttatc
      361 gccggaagat cggtgatatt gaccatgccg cgccgccacc gcgcgcgatt aaaggctttg
      421 ccgatattat tcagaccttc aaggaggtcg ccggtaaccg ggtgattgtc tcgatgactc
      481 tgctagcagg ggcggcttcg ctgctcgtcg gcaacaccta tcagccgctg atgcctggct
      541 ttgcccggga cttgggcgcg actgaagcaa cctttttcta tagcgcgctg ttgacagcga
      601 gtgctgccgg cgctttggcg gcaggcatta tcttggaaat gaaaagcctg atgctaccgc
      661 aagcgcggac ggctttccgg caagtcatca tctggtgcat cttgatgggc ggctttgctt
      721 tcgccaccaa tttttatctc gctcttattt tattgtttgc agcgggcttt ctcgaacttt
      781 cctataaatc gatgacacag accttggtac agctccgggc cccagtagaa attaggggcc
      841 gggtgatcgg cctttattcg tcttcgagcc ttggcctcat tacctttagt ggcgttaccg
      901 tcggctttgg tgccgaactg atcggcatcc actggtcact gggattgagt tcgatggcac
      961 tcctgatcgt aatgattagc ctctatacct attccgaaat taagaaacgc gccaaagagg
     1021 cagtggaaac ggcggcggag taggacggcg gcgatccgcc gaacagccct atcccaaatg
     1081 ggcaatcgaa gcgctaccaa tgtcgagatc acaacttttt ccggccatga tattgcatca
     1141 aatgttttat ctgattatgt taaacccgac tggaaagtta ccattaggct tcccaaaaac
     1201 ggtgaagtgt tgagtagttg cagaaatgag tgtccccatc gtctagtggc ctaggacgct
     1261 ggcctctcac gccggaaaca ggggttcgac tccccttggg gataccaaat tattctatcg
     1321 ccaaatcctg caccaacggc acgaaagaaa ccggcaaaac cggtgattcc gtcacgttgc
     1381 ccgcgtgatc tttgcatatt ctaatcaggt tttgtgggcc gccattagga ccgattggaa
     1441 tgatcatccg cccattacgg tcaagctgat taatgagggt aattggaata tcttcagcgg
     1501 cagctgtcac cataatggcc tgaaaaggcg cttgatctcg ccaaccgtcg cgtccttgac
     1561 cgctaatctg ctcaatattt tcatagccca attgaccaag ccgccttttt gccgcgactg
     1621 ccagttctgg aacgacttca accgaataaa cctgcttagc aacttcagct agaaccgccg
     1681 tctgatagcc tgacccagta ccgatttcca acacccggtc agagttttga atatccagca
     1741 gatcagtcat tatggcgacg acagttggct gcgatattgt ctggccgtaa ccgattggca
     1801 ggggtcggtt ggcataagcc agcggggtat tttcatcatc aacgaaaaga tggcggggta
     1861 cgctctgaag cgcggccctt acctgctcac taagaaccgt acgcccagtc caacgctctg
     1921 ctgttcggac gctttcctgg agctcgctca tcaaccggtg gctcattttc tcgtaagatt
     1981 tggtcataaa tctatgtgtg ttagaaacca tttcaccact gtatccaatt catccgtcag
     2041 atagccccac actgttgccg cgatcttttc cggtatgcca
//
LOCUS       DASCNL010000696         1640 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001409748, whole genome shotgun sequence.
ACCESSION   DASCNL010000696 DASCNL010000000
VERSION     DASCNL010000696.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001409748"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="QF359_09270"
     CDS             <1..444
                     /locus_tag="QF359_09270"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274437.1"
                     /note="Catalyzes first step of the de novo purine
                     nucleotide biosynthetic pathway; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HJO87138.1"
                     /translation="GGKLKHNANRGGLAGERVVLVDDSIVRGTTSEKIVEMVRAAGAK
                     EVHMRISSPPTTHSCYYGIDTPEREQLLASSLDVEAMAKHIDADTLSFISMDGLYRAV
                     GEDQREPDVPHYCDACFSGEYPIDLTDQNGGTASAQLSLLSEQDQ"
     gene            444..1184
                     /locus_tag="QF359_09275"
     CDS             444..1184
                     /locus_tag="QF359_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87139.1"
                     /translation="MNTAAGKLAGRIAVITGASRGIGAATAKIFTAEGAHVILVARTQ
                     GGLEEIDDEIRAAGGTATLVPMDLTDYDKIDEMGATIFERYGKLDILIANAGMLGTMG
                     PINHIDPKIWEQTLAVNVTANWRLIRSFDPLLRQSDAGRAIFLTSFAAQVHRPYWGIY
                     ATSKAALDMMVMTYAQEILKTNVTANLFNPGKTRTIMRAEAYPGEDPETVKVPEFTAS
                     QLVDLVLPSCKLNGEIITAQEPSEEPAD"
     gene            1202..1453
                     /locus_tag="QF359_09280"
     CDS             1202..1453
                     /locus_tag="QF359_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87140.1"
                     /translation="MKECSKTIMRRLHEPNFANRYFDGNGLDVGGRPDPLGLYVELFL
                     RMLGVKVWDKEDDDSQKMIAMTSSTLLVASNISTIRRHF"
BASE COUNT          416 a          389 c          429 g          406 t
ORIGIN      
        1 ggcggcaaat tgaagcacaa cgccaatcgc ggcggtcttg caggcgaacg agttgttctg
       61 gtcgacgatt cgattgtgcg cggcacaact tctgaaaaaa ttgtcgaaat ggtgagagca
      121 gctggcgcca aagaagttca tatgcgcatt tccagcccgc cgacaaccca ttcctgttat
      181 tacggtattg atacgccgga gcgtgagcaa ttattggcgt ctagtttgga tgtcgaagcg
      241 atggccaagc acattgatgc ggatactctt tcctttattt caatggatgg gttgtatcgt
      301 gcggtcggtg aggatcaacg ggaacctgat gtgccgcact attgtgatgc ctgcttctcc
      361 ggtgaatatc ccattgactt aaccgaccaa aacggtggca ccgcctccgc ccaattgtct
      421 cttcttagcg aacaggatca atagtgaaca ccgcggctgg taaattggca ggacgtattg
      481 ctgtcattac gggtgcgtct cggggtattg gcgccgccac cgccaagata ttcaccgccg
      541 aaggcgctca tgtcatattg gtcgcccgta ctcagggcgg ccttgaagaa atcgacgatg
      601 agatccgcgc tgccggagga acagcaacct tggtgccaat ggatttaacc gattacgaca
      661 aaatcgatga aatgggcgct acaatttttg aacgctacgg taagctcgat atcctgatcg
      721 ccaatgccgg catgcttggt accatggggc cgatcaatca tattgatcca aagatttggg
      781 agcaaacatt ggcggtcaat gtcacggcaa actggagatt gatccgaagt tttgatcccc
      841 tgctgcgcca gtcggatgcc gggcgggcaa ttttcctgac ttcttttgcc gcccaggttc
      901 atcgtcccta ttggggaatt tatgccacca gcaaagcagc cttagatatg atggtcatga
      961 cttatgccca ggaaattctt aaaaccaatg tgacagcgaa tttatttaac ccgggtaaaa
     1021 cgcggacgat tatgcgagct gaagcctatc cgggagaaga tccggaaacg gttaaagtac
     1081 cagagtttac ggccagtcag ttggtcgatt tggttttgcc gtcctgcaaa ttaaacggtg
     1141 agattattac cgcccaagag ccttccgagg aacctgctga ttaagtaaga gagtttgcac
     1201 tatgaaagag tgcagtaaga cgatcatgcg gcgcttgcat gaaccgaatt tcgctaatcg
     1261 ctattttgac ggcaatggct tagatgttgg cggcagacct gatccgctcg gtctctatgt
     1321 cgagctattc ctgcgtatgc tgggcgtcaa ggtctgggat aaggaggacg acgattcgca
     1381 gaagatgata gctatgactt cgtccactct tctcgttgcc tcgaacatct cgacgatccg
     1441 gcgacacttt tgataacttt ttcattacca cggaaatctc ccgttcagtg tcgcatctaa
     1501 ccagtatcat aatatggata ttgtggcaaa aagcggcaaa tgatggcgag atttctagcg
     1561 atgaagcgca aaagaagggc gaaaagcacc tcaatgaaga catcttcacc aaacgtcggg
     1621 acattaccga tattgatctg
//
LOCUS       DASCNL010000697         1970 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001412099, whole genome shotgun sequence.
ACCESSION   DASCNL010000697 DASCNL010000000
VERSION     DASCNL010000697.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1970)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001412099"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1097
                     /locus_tag="QF359_09285"
     CDS             <1..1097
                     /locus_tag="QF359_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HJO87141.1"
                     /translation="NYEKVTNVILPTLGEERRATYSPFLPICPKTGVVLQVPVIAHDV
                     EAGSITYQNADGAEVTTPVTSGACKMQWKVDWAMRWVALGVDYEMSGKDLIDSVKLSS
                     AITRILGATPPQGYTYELFLDDVGRKISKSIGNGISMEEWLRYAPPASLSHFMYQKPT
                     QAKRLFFDVIPKNVDEYLQHVSKYPEQDAKTQVSNPVFHIHGGTPPSEDAHISYNILL
                     NLVSVVNTEDKAVLWHFISRYVPEATPENAPTLDKLTEYAVNYFQDFIKTNKQYRAPD
                     DMERAALEDLLKTIGTLPEGSEGSDIQTEVYEVGKRHEFEDLKAWFKCLYEILLGQST
                     GPRMGSFIALYGLDETKALVQKVLDGESLG"
     gene            1494..>1970
                     /locus_tag="QF359_09290"
     CDS             1494..>1970
                     /locus_tag="QF359_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87142.1"
                     /translation="MKQYLGLILGIFFAIGLIGAAQAQVNLSAETAGPTGVPGNVMGH
                     MADVLGEKKIANLQVAQGQTLTNSVRNVAQGKTDLASAPIILPFLLSRGVGPYGKIGK
                     KKGAELAANLRALWTYNAGGFYGFAFANKGWTSWADFKGKTIWNGPPRGAALNNARA"
BASE COUNT          539 a          451 c          486 g          494 t
ORIGIN      
        1 aaaattacga aaaagtcacc aatgtaatat tgccgaccct cggagaagaa cgccgggcaa
       61 cctattcacc gtttttgccg atttgcccaa agaccggcgt cgttctgcag gtgccggtga
      121 tagctcatga tgtggaagct ggctcgatca cctaccagaa tgctgacggt gcagaggtaa
      181 ctacgccggt aactagcggc gcctgcaaaa tgcagtggaa agtcgattgg gccatgcgct
      241 gggttgcgct gggtgttgac tatgagatgt ccggcaagga tttgatcgat tcggtgaaac
      301 tgtcctcggc aattacgcgt attcttggtg cgacgccgcc gcagggttat acctatgaat
      361 tattcctcga tgatgtaggc cgcaaaattt ccaaatcaat cggcaatggc atctcgatgg
      421 aagaatggtt gcgttatgcg ccaccggcgt cactgagcca ttttatgtat caaaaaccga
      481 cccaggcaaa acggttgttt tttgatgtga tacccaaaaa tgtcgatgag tatctccagc
      541 atgtttcgaa atacccggaa caagatgcca aaactcaagt aagtaatccg gtgtttcata
      601 ttcatggtgg cacaccgccg agcgaagacg cgcatatctc gtataatatt ctactcaact
      661 tggtgagcgt cgttaatacc gaagacaaag ccgtactctg gcatttcatt tctcgctatg
      721 tgccggaagc gacgccggaa aatgccccga ccttggacaa gctcaccgaa tatgcggtca
      781 attacttcca ggacttcatc aaaactaata aacaataccg cgcgccagac gatatggagc
      841 gcgccgccct cgaggatttg ctcaagacga tcggcacgtt gccagaaggt tcagaaggct
      901 cggacatcca aaccgaagtt tatgaggtcg gcaaacgcca tgagtttgaa gatctcaaag
      961 cctggtttaa atgtctttat gagattttac tcggccaatc gacgggcccg cgcatgggtt
     1021 ctttcattgc cctctacggc ttggatgaaa ccaaagctct ggtccaaaag gtactagatg
     1081 gcgagagttt gggttaaact aaattaacca tcaatttttt tccgagagca gcagcaaatc
     1141 gctgtcccgt agcgatggcg gcgatgccat aaggaaacgt ggcgcctaag atagactatt
     1201 gtccggcaag ctcgccgttt aactcctcaa aagcgtctat gctcatcatc acgctaaaaa
     1261 aataactact attgtaacaa aaataagaac ttcctataat cgataataaa gtgtttataa
     1321 gtggcaggct cggcaatata gataagctgt gaatttgtga gtagaaaggg cgacggtgaa
     1381 tcgttaaact tgaggtggtt ggctatgccc ctttggctag caggaagtgt tggggttgtg
     1441 gttatctaaa atcactgact atgttttaac ttagtgttca agtaggagtt attatgaaac
     1501 aatatctagg actaatatta ggaatttttt tcgcaatagg tttaatagga gccgctcagg
     1561 cgcaggtaaa cctctcagcg gaaacagcag gaccaactgg tgtacctggc aatgtcatgg
     1621 gacacatggc cgatgtgctg ggtgaaaaga aaatcgccaa tctccaagta gcgcaaggtc
     1681 aaaccctcac aaattctgtg cgcaatgtcg ctcaaggtaa aaccgatctt gcttctgccc
     1741 ccattatcct gccttttctc ctttctcgcg gcgttggccc ttatggtaag ataggaaaga
     1801 aaaaaggtgc tgaattggcg gcaaaccttc gcgccttatg gacttataac gctggtggtt
     1861 tttatggctt tgcctttgcc aataagggct ggacaagctg ggcagatttc aaaggcaaaa
     1921 ctatttggaa cggccctcct cgcggcgccg cactaaataa tgcacgtgct
//
LOCUS       DASCNL010000698         1488 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001412337, whole genome shotgun sequence.
ACCESSION   DASCNL010000698 DASCNL010000000
VERSION     DASCNL010000698.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1488)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1488)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001412337"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(363..527)
                     /locus_tag="QF359_09295"
     CDS             complement(363..527)
                     /locus_tag="QF359_09295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87143.1"
                     /translation="MILSRLALMDQAAVLNGQFFDLFSPFDDGGVTPEVGGGGCAWRR
                     QVKLAVRIVS"
     gene            630..>1488
                     /locus_tag="QF359_09300"
     CDS             630..>1488
                     /locus_tag="QF359_09300"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87144.1"
                     /translation="MNIIQPNAVEKSTKKTKPKIDQWVPSSCALCYGSCSVLAHRVDD
                     VIVKIEGNPNSVVGKGRLCGKGVSGIMSHYDPNRLTVPLRRTNPEKGIGVDPKWQEIS
                     WDEALDEIAEVLKKLRAEDPRKLVVQRTTTLTASRIPFTTFAAGFGTPNHSTAGGGLH
                     CGNGAHLISGVMHASWGILPDFQYCNYAMFFGASKGHSAGHASTSNMVMAADARDRGM
                     KLVVIDPMCNFASAKATEWVPLKVGTDGALALSMCNVLANELEALDVAYLKAKTNGPY
                     LIGSDQQYVR"
BASE COUNT          405 a          364 c          363 g          356 t
ORIGIN      
        1 gaccgggttg atctagtaag cgcatgaagt ttcttcccta agcgatgggt aatgattttg
       61 attttggaaa ttattgccgg cgattttata cagagacatc ataaggaaca agcttgagag
      121 ttgaaaatca gaaaaggaaa attcgatggt tctggggatc aatggaaaga cagcatttat
      181 attgcaacct tcggctgcca gtgcccgcgc gataccggct ccaatacctt gcgatgcccc
      241 caacacccga gccattccct tgagctatat ttcttaaatg ttgtttgttt gcggcagcgc
      301 aaaaatcgac ctgatgtctc aattaacaaa cgctaggaac cctcgtggta aattcagatt
      361 attcagctga cgattcgaac ggcaagtttt acttgccgcc gccaggcaca cccgccgccg
      421 cctacttcgg gcgtcacacc accatcatcg aaaggagaga aaagatcaaa aaactgacca
      481 ttcaaaaccg ccgcttgatc catcaacgcc aagcggctta atatcaatcc aagatgagcc
      541 aggtcctctt ctaggaaacc tgttcagaca gaccaattgt tttgatgacg gacatggcct
      601 atgaagatgg ataaaaagga aaagtggaaa tgaacatcat ccaaccaaat gcggtagaaa
      661 aatcgaccaa aaaaactaaa cctaaaatcg atcaatgggt gccatcttcc tgcgcgctat
      721 gctacggctc gtgctctgta ttggcccatc gggtggacga tgtaattgtc aaaattgaag
      781 gcaatcccaa tagtgtcgtc ggcaaaggcc ggctttgtgg taagggggta agcgggatca
      841 tgtcgcacta cgaccccaac cgtctcaccg tgccactccg ccgcaccaat ccagaaaaag
      901 gcatcggcgt tgatcctaaa tggcaggaaa tttcctggga tgaggcactc gatgaaattg
      961 ccgaggtgct caagaaactt cgtgccgaag atccccgaaa actggtggtg cagcggacta
     1021 ccacgttaac cgcgagccgc atacctttta ccacttttgc tgccggtttc ggtacgccca
     1081 atcactcgac cgccggaggc ggattgcatt gtggcaacgg cgcgcatttg atcagtgggg
     1141 ttatgcatgc ctcatggggc atcttaccgg actttcaata ttgtaattac gccatgttct
     1201 tcggagcatc caaaggtcat agcgccggtc atgcttcgac gtcgaatatg gtcatggcag
     1261 ccgatgcacg tgatcgcggc atgaagcttg tggtaattga tccgatgtgt aattttgcct
     1321 ccgccaaggc gaccgaatgg gtgccactta aggttggcac cgatggtgcg ttagctctat
     1381 caatgtgcaa tgtcttagcg aatgaacttg aagctttgga tgtagcttat ctcaaagcca
     1441 agacaaatgg accatatctg attggttctg atcaacaata tgtccgcg
//
LOCUS       DASCNL010000699         1652 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001418733, whole genome shotgun sequence.
ACCESSION   DASCNL010000699 DASCNL010000000
VERSION     DASCNL010000699.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001418733"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..669
                     /locus_tag="QF359_09305"
     CDS             <1..669
                     /locus_tag="QF359_09305"
                     /inference="COORDINATES: protein motif:HMM:NF012273.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO87145.1"
                     /translation="GVVPTLVVDGKPVIESTLICEFLDETYPEPCLKPADAYDRTRMR
                     LWSKAVDEGLFEGVMDLSFSAMFRERVLNMTGEQRAQRFANVGDPRRRERVMSTFQEG
                     VASPFVFNGIAAYEKAFKTMEKDLGDGRTWLLGEQFTLADINLMPFVARLGFLGLLDI
                     WIAGRPLVQSWRERALARPSFASGITDHFKPGEVEEMKDFGAKIKDQVAERYAEYLAQ
                     FPNT"
     gene            complement(779..1237)
                     /locus_tag="QF359_09310"
     CDS             complement(779..1237)
                     /locus_tag="QF359_09310"
                     /inference="COORDINATES: protein motif:HMM:NF014376.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO87146.1"
                     /translation="MAKVKILDSEGGNLYERANDMFVKVTAGDTDGSYEVCEERCPAG
                     FASRPHMHTVSHETFYVLKGSATFLLGEEKHVGKVGDIIHIPPGVPHQMIAGDDGVRV
                     LMVYSPGTTEAMFADMTALTPEERADFETGAAVAAKHNTIWVENFPENQG"
     gene            complement(1462..>1652)
                     /locus_tag="QF359_09315"
     CDS             complement(1462..>1652)
                     /locus_tag="QF359_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87147.1"
                     /translation="EAVMGKGSGIDNCKHWLDKFQIQANEDEAMEVLMAVKEWGLVHK
                     RLMKDEEFATLAKEVLEN"
BASE COUNT          374 a          393 c          420 g          465 t
ORIGIN      
        1 ggcgtggtgc caactctcgt ggttgatggc aagccagtta tcgaatcgac gttgatctgc
       61 gaatttttgg atgaaactta tcccgaacct tgcctcaagc cggcggatgc ctatgaccgc
      121 acacggatgc ggctctggag caaagctgtt gatgaaggcc tgttcgaagg agttatggat
      181 ttgagtttct cggcgatgtt ccgtgagcgc gtgctgaata tgaccggcga acaacgggcg
      241 caaagatttg ccaatgtcgg cgatcccaga cggcgggaac gggttatgtc gacctttcag
      301 gaaggtgttg cctcgccatt tgtttttaac ggcatcgcgg cttacgaaaa agctttcaaa
      361 accatggaaa aagatcttgg tgatggacgg acctggttgc tgggcgagca gtttaccctc
      421 gctgatatca atctgatgcc cttcgtggcc cggcttgggt ttttaggact gctcgatatt
      481 tggattgccg ggcggcctct ggtgcaaagc tggcgcgagc gggcactggc gcggcctagc
      541 tttgctagtg gtatcacaga tcattttaag ccgggtgaag ttgaagaaat gaaagacttc
      601 ggcgccaaga tcaaggatca ggtggctgaa cgttacgccg aatatttggc gcaatttcct
      661 aacacttaag tgatttattt attctttacc gatatttccc atataacctt caaactgggg
      721 tcaattgtag gtcagtctgg ccacagttgg catgtttatt acccctttta agtttttttt
      781 aaccttggtt ttctggaaag ttttcgaccc aaatggtgtt gtgtttggca gcaacggcgg
      841 caccggtttc aaaatcagcc ctttcttccg gggtcaatgc tgtcatatct gcgaacatcg
      901 cttcggtggt gcccgggcta tagaccatca acacgcggac gccatcatcg ccagcgatca
      961 tttgatgcgg aactcccggt ggtatgtgaa tgatatcccc gactttacct acatgttttt
     1021 cttcgccgag caggaaagtc gcactgcctt tgaggacata aaaagtttcg tggctgaccg
     1081 tgtgcatatg cgggcgcgag gcgaagccgg ccgggcaacg ttcttcacaa acttcataag
     1141 agccatcggt atcaccggcg gtgactttga cgaacatatc attggcgcgt tcatagagat
     1201 tgccgccttc tgaatcgagt atttttactt tagccatttt tattctcccc atttgtctaa
     1261 ttctataacg tttctcaaag tgtcattaac aaactagttt tgttgcggat tttgtaatcg
     1321 aagccattga aaaacgcgct gccaatagct taatcccagc gtctcggtaa aacaaatcca
     1381 tttttcaaaa agtcgtgatc aagtacaaaa aaagcccagc ctcgtgtgga gaccgggctt
     1441 tttggaaaag cgtatatccg cttagttttc aagcacctct ttcgccaagg tggcgaattc
     1501 ttcgtctttc atcaggcgct tgtgaaccag gccccattcc ttgacggcca taagaacttc
     1561 catggcttcg tcttcgttgg cctggatctg gaatttatcc agccagtgtt tgcagttgtc
     1621 gatgccggag cctttgccca tgacagcttc cg
//
LOCUS       DASCNL010000700         4068 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001419976, whole genome shotgun sequence.
ACCESSION   DASCNL010000700 DASCNL010000000
VERSION     DASCNL010000700.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4068)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4068)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4068
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001419976"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(273..1256)
                     /locus_tag="QF359_09320"
     CDS             complement(273..1256)
                     /locus_tag="QF359_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HJO87148.1"
                     /translation="MTKAIVIHQYGGPEVLQWEDIDIGDPGPDEVRIKHEAVGLNFRD
                     TYHRSGSYGVPGDRFPTIIGGDGAGTIEAVGEKVSNLSVGQRVTYGNGPMGSYAQSRL
                     MPAKFVLPLPDGIEFQTAAAMMVKGMTAQYLIRSCYPVSSGDTILIQAVAGGVGLILC
                     QWAKHLGATVIGTVSTEEKAELAHSYGCDHAINYSEEDFAKRVREITDGEGVPVVYDG
                     VGLSTFEGSIDSLRVRGTLVGYGNASGNFPKFDPLLLMDKGSLYFQRTSMRHFVRDRA
                     ELEQVSGEIMALVSEGTIKIEVNKTYPLEEAPQAHIDLEARKTSGSIVYIP"
     gene            1566..3494
                     /locus_tag="QF359_09325"
     CDS             1566..3494
                     /locus_tag="QF359_09325"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HJO87149.1"
                     /translation="MIDKFELFMRQIGLWIGFVLAAAAIYGAGPFPFIDQGLRLGGAI
                     GSAVVITLSLKPLAKEFGGSSEFRRLFLWLIDIVILFGFIFTLFNFAEVYESLWDGVI
                     ILEAPTLAIGFFGTLVIIEMVRRAFGIILPIICIVMLVYAQFGDLPGIFGHRGFTFEE
                     VVEVSWFSFSGVFGRPTDIVSSIVLVFIVFGAVLEATGATTILLKMATTATARIRGGT
                     AHSAIVASALFGTISGSPVANVVGTGVFTIPMIKRQGFTNAFAGAVEAAASSGGQFTP
                     PIMAAVAFIMAELIGVPYLQIAIAAAIPALFYYFSLFASVYAEAVRLGIEPLEEDQIP
                     VLTKDDWIEAARFIVPLVVVVAVLFAGRSAAMAGFSAIVAAIVTGIGIDLIYVEKRQH
                     IGAYGKQLVDALQKGGAQCAQIMVAVGSIGIVIAVVSLTGIAGNFGTLVAELAEGSLF
                     AALAVTAIACLILGMGLPTLPAYLFIVLFVGPVIGQLGIPVLLVHMFVLYFGVLSNVT
                     PPVAIAAYAAAPIAQSNPMSTGFQAIKISAVGFIIPFILIYYPSISIVIGFDWGPFMW
                     ILVRMPVAVWLVATAFIGCDQHTLPAYERILRTAAAVAMLIVDPTLQIGGLVVGVGLI
                     ALHRIRAKNKTAVTEAGQ"
     gene            3614..>4068
                     /locus_tag="QF359_09330"
     CDS             3614..>4068
                     /locus_tag="QF359_09330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87150.1"
                     /translation="MIIKLSKFVIAALVAAFTFTAATTLEAADKRYTLGSLAAGTTPF
                     LVNTAWAKAVGKYVPGHKIQVSAVGAATKHMVLVIKRRMDFTMGAQVAYRLMAYEIGP
                     FKKLKNGLAQANKLSGLFSYPIGLYHAVAYEGSGIKTYNDIKGKKVFIGP"
BASE COUNT          914 a          979 c         1006 g         1169 t
ORIGIN      
        1 tctggcgccg aggcctctaa tttcatggcc accgtcatta cggatttggc cctatctgaa
       61 taggagctaa ttaccaacaa tggctcggcc gatagtatct tcatcggtgt cgaaccaaac
      121 tgttccagtc gctgcgtaat aatgcatgtc gcggacaatg ccggcgcttg acggtattgg
      181 cgtgatcaaa aatattttat tctgcgctgg atcgaagcct aagatgatgg tcgattcctg
      241 tcaagaaaac cgacgaatgg ctggcatcac atttatggta tgtagacgat ggagcccgaa
      301 gttttgcggg cctcgagatc aatgtgggct tgcggcgctt cttctagcgg ataggtttta
      361 tttacttcga tcttgatcgt tccttcagat accagtgcca ttatttctcc tgacacttgc
      421 tcaagctcgg cacggtcgcg aacaaaatgc cgcatcgacg tccgctgaaa atagagcgag
      481 cctttatcca ttagtaacag cggatcgaat ttcgggaagt tgccggatgc attgccgtag
      541 ccgaccagcg tgccacgcac cctaagactg tcgatcgagc cctcaaaggt tgataatccg
      601 actccatcat agacgaccgg cacgccttca ccatcggtga tttcccgcac tcgtttggca
      661 aagtcttctt cagaataatt gatagcatga tcgcagccat aggagtgggc gagctctgct
      721 ttttcttcgg tacttaccgt gccgatgacc gtagcgccta aatgcttggc ccattggcac
      781 aggatcaaac cgacgccgcc cgcaaccgct tgaatgagga tggtatcgcc ggaactcacc
      841 ggatagcagg agcgaatgag atattgcgcg gtcatgccct taaccatcat ggcggcggca
      901 gtttgaaatt caataccgtc gggtagaggt aatacaaatt tggccggcat aagccgggac
      961 tgggcgtaag agcccatcgg gccattgcca taggtaaccc gctgaccaac gcttaaattg
     1021 ctgacttttt cgccgaccgc ttcaatcgta ccggcaccgt cgccaccgat aattgttgga
     1081 aacctatctc ccggtacgcc gtaggagccg gaacgatgat aggtatctct aaaattcaga
     1141 ccgacagctt catgcttgat tctgacttca tctggtcccg gatcaccgat gtcaatgtct
     1201 tcccactgaa gtacttccgg tccaccgtat tgatggatga caattgcttt ggtcataaat
     1261 tcccccatta taaaaatcaa atttattgtg atgcgctttt gtagaaaacc atagtatcga
     1321 ctacacggtc aatattatgg aatagcgaaa cgcccgctag ttattctttg acggaccaga
     1381 cggtgttcgg gtcgaactga ttgagttaag ataacaactt cagtaaaacc gcgacttgac
     1441 ccaaactcca accccaggta tctaacgctc actcaagggt caggactcat taacctcatt
     1501 ttattcaaaa agtatgttat tagaaatatt gacgtaagca gttaatacag ggacggcatt
     1561 aacgaatgat agataaattt gagcttttta tgcggcaaat tggactttgg attggatttg
     1621 ttcttgctgc cgcggccatt tatggtgccg ggcctttccc ttttatcgat caagggttac
     1681 gcctcggtgg cgccattggt tcggcggttg tcattacgtt atcccttaag cctctggcca
     1741 aggaattcgg cggcagctct gaattcagac ggctgttttt gtggcttatc gacattgtaa
     1801 ttttgtttgg ctttatcttt acgcttttta attttgccga agtttatgaa agcctttggg
     1861 acggcgtgat tattctggaa gcgccgacat tagccattgg ctttttcggc actttggtga
     1921 tcatcgaaat ggtgcgccgt gcgtttggta ttattttacc tattatttgc atcgtgatgc
     1981 tggtttatgc ccagttcggt gatctgccag gtatttttgg ccatcgaggt tttacgtttg
     2041 aagaagttgt cgaagttagc tggtttagct ttagtggtgt ctttggccgg ccaaccgata
     2101 tcgtttcttc gattgtgttg gtcttcatcg tctttggagc tgtcctggaa gccaccggtg
     2161 cgaccacaat tttacttaaa atggcgacaa cggcaactgc ccgcattcgc ggcggtacgg
     2221 cgcattcggc aatcgttgct agcgccttat tcggtaccat ctccggcagt cctgtcgcca
     2281 atgttgtcgg tacgggcgtc ttcaccattc caatgattaa acgccagggc tttaccaatg
     2341 cctttgccgg tgcggtcgaa gcggctgcat cgtccggcgg ccagtttacg ccgccaatta
     2401 tggcggccgt tgccttcatt atggccgagc ttatcggtgt accctatttg cagattgcga
     2461 ttgcagcagc cattcccgcc cttttttatt atttcagttt gttcgccagt gtttatgcag
     2521 aagcggtgcg tctcgggatt gagccactcg aagaagatca gataccggtt ctaaccaagg
     2581 atgactggat tgaggcggcg cgctttattg tgcctctcgt tgttgttgtc gcagttttgt
     2641 ttgcaggtcg ttcggcagcc atggccggat tttcagccat cgttgccgcc attgtaaccg
     2701 gtatcggcat cgacttaatt tatgtcgaaa aacgccaaca tattggcgct tatggcaaac
     2761 aactggttga tgccttgcaa aaaggtggtg ctcaatgtgc gcagattatg gtggcggttg
     2821 gttccatcgg tattgtcatc gccgttgtca gtttgaccgg tatcgccggc aattttggca
     2881 ccctggtcgc cgagttggcg gagggatcgc tctttgccgc cctggcggta accgcaatcg
     2941 cctgtttgat cctagggatg ggattgccga cgctgccagc ctatctgttt attgtcttgt
     3001 ttgttggtcc agtcatcggc caacttggta tccccgtatt gctggtccac atgttcgtgc
     3061 tttatttcgg tgttttgtcg aacgtgactc cgccggtggc tattgccgcc tacgctgcag
     3121 ccccgattgc gcaatcaaat cccatgtcaa cgggatttca agcgatcaaa atatcggccg
     3181 tgggtttcat tatcccgttt attctgattt actatccgtc gataagtatc gtcatcggtt
     3241 ttgattgggg tccatttatg tggattttag ttagaatgcc cgttgcggta tggctagtag
     3301 caaccgcttt tatcggctgc gatcaacaca cactgcctgc ttatgaacgt atcctgcgca
     3361 ccgccgccgc cgtggcgatg ctcattgttg atccgacgct gcagattggc ggcctagttg
     3421 ttggtgtcgg cttgatcgcc ctgcatcgaa ttcgggcaaa aaataaaaca gccgtgacgg
     3481 aagctggtca ataacaggag aatagtaagt atttagcacc gtaatttaga caggatggtt
     3541 aaattatagt actgttttgc ctatgaataa tgttaagatt ttttagtttc tttattaaca
     3601 gggagtccca aatatgatta tcaagctaag caaattcgta atcgcggcat tagttgctgc
     3661 ttttaccttt accgcagcaa cgaccctcga agctgcggat aaacgctata ccttgggcag
     3721 cttggctgct ggcaccacac ctttcctggt taacaccgcc tgggcgaaag ctgttggtaa
     3781 atatgtgcca ggccataaaa ttcaggtttc tgccgttggt gccgcaacca agcacatggt
     3841 tttggtcatc aaacgccgca tggatttcac catgggtgcc caagttgcct atcgtctgat
     3901 ggcttatgaa attggaccat ttaagaaatt gaaaaatggt ctcgcgcagg caaataaatt
     3961 atcaggccta ttttcttacc cgatcggtct ttaccatgcc gtcgcatacg aaggttctgg
     4021 cattaaaacc tataatgaca tcaaaggaaa aaaagtcttc ataggtcc
//
LOCUS       DASCNL010000701         3648 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001421374, whole genome shotgun sequence.
ACCESSION   DASCNL010000701 DASCNL010000000
VERSION     DASCNL010000701.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3648)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3648)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3648
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001421374"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2084
                     /locus_tag="QF359_09335"
     CDS             <1..2084
                     /locus_tag="QF359_09335"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006097 - glyoxylate cycle [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HJO87151.1"
                     /translation="PDAFWQAFEDVLNDLAPKNKALLQKRDDLQTKIDAWHVEHKGQD
                     HDAAAYKQFLLDIGYLVPEGDDFEISTSNVDPEIATIAGAQLVVPTSNARFALNAANA
                     RWGSLYDALYGTDVIDETDGKERSGGYNEIRGAAVIDYAASVLDQANPLASGSQKDAT
                     GYAIKDGALAVALGEDSTGLADPTQFAGYQGSADAPSLILLVHNGLHIEIQIDRDHAI
                     GKDSAAGVKDVVLEAAITTIQDFEDSVAAVDAEDKALIYENFLGLIKGDLEDTFDKSG
                     SSMTRRMNPDRDYTTPDGGTLTLSGRSLLLVRNVGHLMTNPAILDKDGNEVPEGIMDA
                     MFTGLVGIHDLKGTGAFKNSREGSIYVVKPKMHGPEETAFTCELFSRVEDALGIPAKT
                     MKVGIMDEERRTTVNLKECVRAAVDRVVFINTGFLDRTGDEMHTSMEAGPFLPKADIK
                     TEPWINAYEDWNVDIGLETGFRGKAQIGKGMWAMPDEMAAMMDTKIGHPQAGANTAWV
                     PSPTGATLHAIHYHQCSVTDRQEELASRGRASLDDILTIPLLGGRNLSADEVQNELDN
                     NAQGILGYVVRWVEQGVGCSKVPDINNIALMEDRATLRISSQHIANWLHHGVCAEDQV
                     METMKRMAAVVDSQNAGDSAYHNMAPDFDNSIAFGAACDLVFKGLEQPAGYTEPILHA
                     KRQEAKAKLGQ"
     gene            2112..>3648
                     /gene="nadB"
                     /locus_tag="QF359_09340"
     CDS             2112..>3648
                     /gene="nadB"
                     /locus_tag="QF359_09340"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HJO87152.1"
                     /translation="MQDRRQQIPEPRPGIDSQSTYDVLIIGSGAAGLTLALQLSADVR
                     AAVLSKGALTEGSSYYAQGGIAAVLEEGDTFASHIEDTLNAGGGLCDLEAVKFTVENG
                     PAAIGQLIDHGVAFTSNDETSDKYPYHLTREGGHSQRRVIHVADATGKSVENTLIVRA
                     KERQNISMFENILAVDLVREKLAGGYLGRCVGAYALDTQDGRVKLIKARAVVLATGGA
                     SKVYLYTSNPDGSTGDGIAMAWRAGCRVGNMEFSQFHPTCLYHSEAKSFLITEAVRGE
                     GGILTTPDGNRFMARYDERLELAPRDIVARAVDHEMKRLGVEHVYLDISHQPTSFIEE
                     HFPTVYERCLEYGCDMTKEPLPVVPAAHYTCGGVVTDQRGRTDVEGLWAVGEVAFTGL
                     HGANRMASNSLLEGLVFAGAAARDIDVTLDERAAPPELPAWDETFVTDSDEEVVVAHN
                     WDELRRFMWDYVGIVRTSKRLERARHRVELLLHEIAEYYWNFRVTSDLLELRNLSQVA
                     ILII"
BASE COUNT          845 a          896 c         1059 g          848 t
ORIGIN      
        1 aacccgatgc tttttggcag gcttttgaag atgtgctcaa cgatctggca ccgaaaaaca
       61 aagcgctgtt gcaaaagcgt gatgatctgc agaccaagat cgatgcctgg catgtcgagc
      121 acaaaggtca ggatcatgat gcggcggctt ataagcagtt cttgctcgat atcggttatc
      181 tcgtgccgga aggcgacgat tttgaaattt ctaccagcaa tgttgatcct gagatcgcga
      241 cgattgccgg ggcacagttg gtggtgccga cttcgaatgc ccgctttgcc ttaaacgctg
      301 ctaatgcgcg ttggggcagc ctctatgatg cactttacgg cactgatgtt attgatgaaa
      361 cagacggtaa agaacgcagt ggcggctaca acgagattcg tggggcggcg gttattgatt
      421 atgctgccag cgtactggat caagctaatc cgcttgcatc gggcagtcaa aaagatgcga
      481 ccggctatgc cattaaagac ggcgcgcttg cggtggcgct tggtgaagat agtacaggtt
      541 tggctgatcc aactcagttt gccggttatc agggctcggc agatgcacct tcattgatat
      601 tgttggtcca taacggactt cacatcgaga ttcaaatcga ccgcgaccac gccatcggta
      661 aagacagtgc ggctggcgtc aaagacgttg ttttggaagc agcgatcacg accattcagg
      721 attttgaaga ttccgtagcg gctgtcgatg ctgaagacaa ggcgcttatt tatgagaact
      781 tccttggtct gattaagggc gatcttgaag atacctttga taaaagtggc tctagcatga
      841 cccggcggat gaacccggac cgggactaca cgacacccga tggtgggacg ttgacgctat
      901 ctgggcgttc acttctgcta gtgcggaatg tcgggcattt gatgaccaat ccggccattc
      961 tcgataaaga cggtaatgaa gtgccggaag gtattatgga tgcgatgttt accgggctcg
     1021 ttggtattca tgatctcaaa ggaaccggtg cattcaaaaa cagccgtgaa ggctcaatct
     1081 atgtggtgaa acccaaaatg cacggaccgg aagaaaccgc ctttacctgt gagcttttca
     1141 gccgcgttga agatgcactc ggtattccgg caaaaacaat gaaggtcggc atcatggacg
     1201 aagaacgccg caccaccgtt aaccttaagg aatgtgtgcg ggccgcagtt gatcgtgtgg
     1261 tgttcattaa taccggcttc cttgatcgca ccggcgatga aatgcacacc agcatggaag
     1321 cgggaccgtt cttgcccaaa gccgacatta agaccgagcc ttggatcaat gcttatgaag
     1381 actggaatgt tgatattgga ctcgaaactg gctttagggg caaggcgcaa atcggtaaag
     1441 gtatgtgggc gatgccggat gaaatggccg cgatgatgga caccaagata ggtcatccgc
     1501 aagctggcgc taataccgcc tgggtgccat cgccaacggg cgcgacctta cacgccattc
     1561 actatcacca atgcagcgtc accgaccgtc aggaagaact agccagccgt ggccgcgcca
     1621 gcctcgacga tattctgacc attccattgc tgggtgggcg caatctgtca gccgacgaag
     1681 ttcaaaacga gctcgataac aatgcgcaag gcatcttggg ctatgtcgtc cgttgggtcg
     1741 aacagggggt tggttgctcc aaagtgccag atatcaataa cattgcattg atggaagacc
     1801 gggcgacgct caggatttcg agtcagcaca tcgccaactg gctgcatcac ggtgtctgcg
     1861 ccgaagatca agtgatggag acgatgaagc gaatggcggc ggtggttgac agccagaatg
     1921 cgggagacag tgcttatcac aacatggcgc cggacttcga taacagcatt gcctttggtg
     1981 cggcgtgtga tctcgtgttt aagggcctcg aacaacccgc cggctacacc gaaccgatac
     2041 ttcacgccaa acgccaagag gccaaggcga agctcgggca gtaagccagc cgaaacttat
     2101 tgggagcaat catgcaggat cgtcgccagc aaatacctga accgcgtcct ggcattgata
     2161 gccagtccac ctatgatgtt ctaatcattg gttctggggc ggcagggttg accctcgccc
     2221 tgcaattgtc cgcggatgtg cgggccgccg tgctcagcaa aggggcgttg accgaaggca
     2281 gttcttatta tgcccaaggt ggtattgcgg ctgttctgga agaaggtgat accttcgcct
     2341 cccacatcga agatacattg aacgccggtg gagggctctg tgatctggaa gctgtaaagt
     2401 ttacggtgga aaatgggcca gccgccattg gccagctgat tgatcatggt gtagcattta
     2461 cctcaaacga tgaaaccagt gacaaatatc cctatcacct gacccgcgaa ggcgggcact
     2521 ctcagcgccg tgtgatccat gtcgctgatg cgacgggtaa atcagttgaa aatacgctaa
     2581 tcgttcgggc caaagagcgg cagaacattt caatgttcga gaatattctc gctgttgatt
     2641 tggtgcggga aaaactcgcg ggcggctacc ttggacgctg tgttggggcc tatgcactcg
     2701 acacgcaaga cggtcgcgtc aaactgatta aggcccgggc cgtggtgctg gcaaccggtg
     2761 gcgccagtaa agtttatctc tacacttcca atcccgatgg ctcgactggt gatggtatcg
     2821 ctatggcgtg gcgggcaggg tgccgggttg gcaatatgga gttttcccag tttcacccga
     2881 cctgcctgta tcattctgag gctaagtcgt ttctgattac tgaagccgtc cggggcgaag
     2941 gtggtatttt gacaacacct gacggcaatc gttttatggc gcgttacgat gagcgtttgg
     3001 aattagcacc ccgcgatatt gttgcccgag ctgtcgatca tgaaatgaaa cgcctcggtg
     3061 tcgagcacgt ttatctcgac atcagtcacc agccaacatc gtttattgag gagcattttc
     3121 ctactgtcta tgagcgctgt ctagagtatg gttgtgacat gaccaaagag ccgctgcccg
     3181 ttgtcccggc tgctcactac acctgtggcg gtgtggtgac cgaccagcgc ggccggactg
     3241 atgtcgaagg cctgtgggcc gttggcgagg tcgctttcac cggcttgcat ggcgccaatc
     3301 gcatggccag taactcttta cttgaggggt tggtttttgc tggtgcggcg gcgcgggata
     3361 tcgatgtgac attggatgag cgggccgcgc ctccggaatt gccagcctgg gatgaaacct
     3421 ttgttaccga ttccgatgag gaggtggtgg tggcacataa ctgggacgag ctgcgccggt
     3481 tcatgtggga ctacgttggt attgtccgaa cctccaagcg attggagcgg gcacggcacc
     3541 gggtagagct gctgctccac gaaatcgctg agtactattg gaattttcgc gtcaccagcg
     3601 atcttttaga actgcgcaat ctttcgcaag ttgccattct gattatcc
//
LOCUS       DASCNL010000702         1200 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001425659, whole genome shotgun sequence.
ACCESSION   DASCNL010000702 DASCNL010000000
VERSION     DASCNL010000702.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1200)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1200)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001425659"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            207..995
                     /locus_tag="QF359_09345"
     CDS             207..995
                     /locus_tag="QF359_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MinD/ParA family protein"
                     /protein_id="HJO87153.1"
                     /translation="MAIAPSQSSTAAQVGAKAHGRIAVASGKGGVGKTWFAITLAHAL
                     ANKGKKALLFDGDLGLPNVDIQLGLMPKHDLGGVVAGRLPLNQAAMTYEDGGFDIIAG
                     RSGSGNLANIPANRLQSLNEGLTMLSSSYDHIIFDLGAGVERTVRNLANQAETVLVIT
                     TDEPTALTDAYAFIKLTHMERPNIDLRIVVNMANSTKEGERTYNTILKACQGFLKFSP
                     PLAGVIRRDTKVRETIHNQTSILVRFPNTEAATDVGNIVDKLIG"
BASE COUNT          342 a          280 c          269 g          309 t
ORIGIN      
        1 agaacaacga aagttgggca aaatgaacca tatatctatc ggtaaattgg gcgcttccgt
       61 ccgtctacgg ttattatgtc gcaaaacgaa attcatccaa aagcgaaaat aaaaaccgtc
      121 ggacaagttt aatttttacc aaattaaatt cataatagga ctcagtatat ttggctaaga
      181 ctaatagaat aaggtaaaca ccttttatgg caattgcccc ctcccaatct tccaccgccg
      241 ctcaagtagg tgcaaaagcg catggcagaa ttgccgttgc ctccggtaaa ggcggcgtgg
      301 gtaagacgtg gttcgccatt accttagctc atgcgctcgc taacaaaggc aaaaaggctt
      361 tactgtttga cggtgatcta ggtttgccca atgttgatat tcaattgggc ctgatgccga
      421 agcacgattt aggtggcgtg gtcgctgggc gtttgccgct taatcaggcc gcaatgacct
      481 atgaagatgg tggtttcgat atcattgccg gacgctcagg ttcaggtaac ctcgccaaca
      541 taccagccaa tcggctgcaa tctttgaatg aaggcctcac catgctgtca tcttcatatg
      601 atcacattat attcgacctt ggtgccggcg ttgaacggac ggtgcgcaat ttagccaatc
      661 aagcggaaac cgttctggtt attacgaccg acgaaccgac tgctctcacc gatgcttatg
      721 cctttataaa attgacccat atggaaagac ccaacattga tctgcggatc gtggtgaata
      781 tggcaaattc gactaaagaa ggagagcgga cctacaacac gatcctcaaa gcttgccagg
      841 ggtttcttaa attttcgcca cctttagcgg gtgttatccg gcgtgatacc aaggtccggg
      901 aaacgatcca taaccaaacg tcaattctcg tccgcttccc taataccgaa gccgccaccg
      961 acgtaggaaa tatagtcgac aagctcattg ggtgatgaat gacgaccatt attcctcaag
     1021 cccaacatct ctttataatt gcctcccaaa cgctatatct tccaaacacc aaataacgga
     1081 atgcgtgtga tttctaaggt gtattgcaat cgtttgacgg ttggaggagt aaaaaatact
     1141 atgccgatac gttaacatta agaccagtta tgagcgtagg gagactgttg atttcatatg
//
LOCUS       DASCNL010000703         1088 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001427528, whole genome shotgun sequence.
ACCESSION   DASCNL010000703 DASCNL010000000
VERSION     DASCNL010000703.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001427528"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            96..512
                     /locus_tag="QF359_09350"
     CDS             96..512
                     /locus_tag="QF359_09350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87154.1"
                     /translation="MQDNPNELEKYSVRSSDVIYTVCAEAVKIGNDYLVYLWGGEAPH
                     IGAVAAAQPRPSLVDPAEISASSSVLTYVGHKEDIVAKQVAEDLSSALDENVVVTAGI
                     HWDNIEKTGIEKVVAGCREVTEALIEVLGKHNEETK"
     gene            509..>1088
                     /locus_tag="QF359_09355"
     CDS             509..>1088
                     /locus_tag="QF359_09355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HJO87155.1"
                     /translation="MTQPLVVAVTGATGVIYGVELLKVLKELGEETHLILSESAGRNL
                     KIETEYELDDVRALADVVYSNKDIGAAVASGSFLTRGMVVAPCTIKSLSAIANSYNDN
                     LVARAADVTLKEKRRLVLMVRETPLHKGHLDLMSRAADLGATILPPMPSFYHGPQTIQ
                     DIINQSIGKVLDQFSIEHNLFRRWKGDERVSDR"
BASE COUNT          276 a          251 c          302 g          259 t
ORIGIN      
        1 cgaagacttc gatgccgtgg ttgcagccct gacaaatgct agttttacgc tgttggaagc
       61 ttgccctgag gtgcaaaata ttcaaaatac aagcgatgca ggataaccct aacgaacttg
      121 agaaatattc cgttcgcagt agcgatgtga tatacacggt ttgtgccgag gcggtaaaaa
      181 tcggtaacga ttatttggta tatttatggg gtggtgaagc gccgcatatc ggcgctgttg
      241 ccgcggctca gccccggccc agcctggtag acccggctga aatcagtgct tcatcctcgg
      301 tgttgaccta tgttggtcac aaagaagata ttgtggcaaa acaggtcgct gaagatttat
      361 ccagtgcgct tgatgaaaat gttgttgtca ccgccgggat tcactgggat aacatcgaaa
      421 aaaccggcat cgaaaaagtt gttgcgggat gccgggaagt aaccgaggca ctgattgagg
      481 tgctcggcaa acacaacgag gaaacgaaat gacacagcct cttgtcgtcg ctgttaccgg
      541 tgccaccggc gtgatttacg gcgttgaatt gctgaaggtt cttaaagaac tcggtgagga
      601 aacccatctg atattaagtg aatccgctgg ccggaatttg aagatcgaaa ctgaatatga
      661 actcgatgat gtgcgcgcgc tcgccgatgt tgtttacagc aacaaagata tcggcgccgc
      721 agtcgccagt ggatcgtttc tgacccgggg tatggtggtt gcgccttgca cgatcaaaag
      781 cctgtcggca attgccaatt cctacaatga taatctcgtt gcccgggcgg ctgacgttac
      841 cttgaaggaa aagcgccgct tggtgttgat ggtccgggaa acgcccttac acaaaggcca
      901 tctcgattta atgtcacgcg ccgccgattt gggggcaacg atcctgccgc cgatgccgtc
      961 cttctatcat gggccgcaaa ccatccagga tattatcaat caaagcattg gtaaggtgct
     1021 ggatcaattc agcatcgagc acaatctttt ccgtcgttgg aaaggcgatg aaagggtgag
     1081 cgataggg
//
LOCUS       DASCNL010000704         1848 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001427744, whole genome shotgun sequence.
ACCESSION   DASCNL010000704 DASCNL010000000
VERSION     DASCNL010000704.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001427744"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="QF359_09360"
     CDS             <1..678
                     /locus_tag="QF359_09360"
                     /inference="COORDINATES: protein motif:HMM:NF012707.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HJO87156.1"
                     /translation="FNFKNEDGKLMGYDVDVAKGVAGLIGADLEFVCQKWDGMIPALL
                     ANKFDIVVASMSITDKRLKKMDFSDTYRISVGRLVGKKDSGWKLFDDSGKPIPANFAG
                     LKVGLERATTYSDWFENELPEATVVLYDTNEALYLDLVNGRTDMIMTNPMKAHLRFLS
                     KENGAGFEFVSPQIDEKKYFGIGVGIGLRQGNDDLKARLNGALKTLTDGGYLEQYALQ
                     YFPFAIH"
     gene            789..1484
                     /locus_tag="QF359_09365"
     CDS             789..1484
                     /locus_tag="QF359_09365"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO87157.1"
                     /translation="MTAVSGWWDEFFWGSLVVVELFFVALIMTILFGLIGAGAKLSNN
                     RVAKSIASGYTVVFRGTPEILVLLLFYFGSAIILTTIAQIFDPEIKFVDFPPFWAGSF
                     AIALIIGSYATETFRGAFLGVDPGQIEAARALGISSLKTFIYVRIPAMWRLALPPFGN
                     HMLSLVKDTALVAIIGLEETLFVAEQAIAYTAKPFTMYIVVGAIYLGFSTIITLTVMG
                     LERYANRHLEVTR"
     gene            1481..>1848
                     /locus_tag="QF359_09370"
     CDS             1481..>1848
                     /locus_tag="QF359_09370"
                     /inference="COORDINATES: protein motif:HMM:TIGR01726.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJO87158.1"
                     /translation="MSFDIDLILDSIPKMLMGIGLTFELLFLSLVLGTVLGIFLLILR
                     ISGRWYLAAPTMVYIYIFRGTPILVQIFIIYYGLPQLEFVRDSIFWPILREPFGCAIV
                     ALSLNSGAYLSEIFRGGVLGV"
BASE COUNT          396 a          440 c          487 g          525 t
ORIGIN      
        1 ttcaacttca agaatgaaga tggcaaactt atgggctatg acgtcgatgt cgcaaagggc
       61 gttgccggtc taatcggtgc cgatctggaa tttgtctgcc aaaaatggga cggcatgatc
      121 cctgccttgc tggccaataa gttcgatatc gtagtagcgt ccatgtccat tacagacaaa
      181 cgcctgaaaa aaatggattt ctccgacacc taccgcatat cggttggccg tttggtcggt
      241 aaaaaagatt ccggctggaa gctcttcgat gattcgggta agccgattcc tgccaacttc
      301 gccggcctta aagtcggtct ggagagggct acgacttatt ccgactggtt tgaaaatgaa
      361 cttcccgaag ctacggtggt tttatatgat accaatgaag cactctatct cgacctggtg
      421 aatggacgaa ccgatatgat tatgaccaat cccatgaagg cccacctcag gtttctcagc
      481 aaggagaacg gcgcgggatt tgaatttgtc agtccgcaga tcgacgagaa aaaatacttc
      541 ggtattggtg tgggcattgg cctccgacaa ggtaatgatg acttgaaagc tcgattgaat
      601 ggtgccttga agaccctgac tgatggtgga tatctggagc agtacgctct gcagtatttc
      661 cccttcgcga tccactaggc gattactttt cattggtgcg gtgggggttt tgaagcaacc
      721 ctcgccgcac catccgctaa aaaagcaatg ctgaatcaca ctttgacttc cggtggaaat
      781 gggaggctat gactgcagta agcggttggt gggacgaatt tttctggggc tcgctggtcg
      841 tcgtcgaact tttttttgtc gccctgatta tgacgattct attcggactg atcggtgctg
      901 gcgccaagct gtcaaataat cgggtcgcca aatcgattgc cagtggttat acggttgtct
      961 ttcgcggtac acctgagatt ctggttcttt tgctgtttta tttcgggtcg gcgatcattc
     1021 tgacgacgat tgcccagatt tttgatcccg agatcaagtt tgtggatttc ccgccatttt
     1081 gggccggctc attcgccatc gcgttgatca tcggatctta cgcgacagag acctttcgcg
     1141 gtgccttcct cggcgtcgac ccgggacaga tcgaggctgc ccgggcgctc ggtatctcga
     1201 gcctaaaaac tttcatctat gttcgcattc cggcaatgtg gcggcttgca ttgccgccat
     1261 tcggcaatca catgctctcg ctggtcaagg atactgcact ggttgccatc attggtctgg
     1321 aagaaacatt gtttgtcgct gaacaggcga ttgcttacac ggccaagccg tttaccatgt
     1381 acatagtggt cggtgcaatc tacctgggat tttcaaccat catcacctta acagtcatgg
     1441 ggcttgagag gtatgccaac cggcatttgg aggttacgcg atgagctttg atatcgacct
     1501 catcctggac agcattccta aaatgctgat gggaatcggc ctgacgtttg agttgctgtt
     1561 cttgtcgctc gtgttgggta cggtgctcgg catattcctg ctgattctgc gaatcagtgg
     1621 ccggtggtat ctagccgcgc ctacgatggt ctacatctat atatttcgcg gcacccccat
     1681 tctggtgcag attttcatta tttattacgg cttgccacaa ttggagtttg ttcgcgacag
     1741 tattttctgg ccgattctaa gagagccctt cggctgtgca attgttgcct tgtcattgaa
     1801 cagcggagcc tatctttcgg aaatatttcg cggcggggtt cttggtgt
//
LOCUS       DASCNL010000705         2313 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001431351, whole genome shotgun sequence.
ACCESSION   DASCNL010000705 DASCNL010000000
VERSION     DASCNL010000705.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001431351"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(218..361)
                     /locus_tag="QF359_09375"
     CDS             complement(218..361)
                     /locus_tag="QF359_09375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87159.1"
                     /translation="MVTIIRFKDLSANTNAAPPCEIFYGITKKTVPNTNLVIGHTRSG
                     PDI"
     gene            complement(442..1314)
                     /locus_tag="QF359_09380"
     CDS             complement(442..1314)
                     /locus_tag="QF359_09380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87160.1"
                     /translation="MSSEAKFKFILVPPFHLPDQNQFTVPAYSEPADAPKVQRLLNSD
                     FVLKHLEDVDWDLHPGAEPPYGNWSVETREEFAYAATARIECVREACESGKYNAIILL
                     GGGEPGFMESREIGREHSVVVTANAFSQMYLATILGDSFSIIDIEGVHNVYYRDLVRT
                     HQLQGRCRSIRGIGYSLPRPGDTDPDTLTAQCEAAARSEKSIAVERAIDQAEAAIVED
                     GAEVITLGCSMTFFLQPHIRDGLKARGFDVPVLEGYTASIELAKLMVNLGVNASGITY
                     QGARSERYLSKIHI"
     gene            complement(1712..1873)
                     /locus_tag="QF359_09385"
     CDS             complement(1712..1873)
                     /locus_tag="QF359_09385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87161.1"
                     /translation="MQKQPPNWQSSILRALRHTNYLGLRKLKPGLRTLAGILLIIGGM
                     FGFLPILDF"
     gene            complement(1873..2097)
                     /locus_tag="QF359_09390"
     CDS             complement(1873..2097)
                     /locus_tag="QF359_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255349570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(2065..2067),aa:Sec)
                     /transl_table=11
                     /product="SelT/SelW/SelH family (seleno)protein"
                     /protein_id="HJO87162.1"
                     /translation="MKISIEYCAQUNYEPRALRVREQLNELLQADIDLVAGGGGMFEI
                     TVDGQLVFSKKSEGRFPTDEDLQSLAANLA"
BASE COUNT          582 a          573 c          567 g          591 t
ORIGIN      
        1 ccttaacatt attgatgtcg gtgtagcaga acaccagaag gcccggctca tccagtaaaa
       61 tgtaggcgcc gtaaatttca ccaagcggaa taaaattaaa attgccctca ccaaaggaga
      121 cctccgtgat gtcatgatca ggcccgcaca gcttcgtgtc attgcctttg attttgcact
      181 ggccggcacc gctccgcgga tgataatgac gctgatttta tatgtcggga ccggagcggg
      241 tatggcctat gacgagattg gtattgggca ccgtcttttt ggtgatgccg taaaaaatct
      301 cgcagggcgg cgcggcattg gtatttgccg acaagtcttt aaatcgaata attgtcacca
      361 tgctctcccc ctttttaaaa taacactata tccaagcggg caccttgagc attgattttt
      421 ctcaaataac tcaagctctc cctaaatgtg aattttgctc aaataccgtt ctgaacgcgc
      481 gccctggtag gtgatgccgc tggcattgac accgagatta accatcagct tggcgagctc
      541 aattgaagcg gtatagcctt ccagtactgg tacatcgaag ccgcgcgctt ttaggccgtc
      601 gcgaatatgc ggctgcaaaa agaacgtcat cgagcagcca agcgtaataa cttcggcacc
      661 atcttcgaca atcgccgctt cagcctgatc aatagcacgc tcgacggcga tagatttttc
      721 gctccgtgcc gccgcctcgc attgcgccgt caacgtatcc ggatcggtat cacccgggcg
      781 tggtagactg tagccaatac cccggattga gcggcaacgg ccttgtaatt ggtgggtgcg
      841 gacaagatcg cggtaataga cattatgtac gccttcaatg tcgatgatcg aaaaactatc
      901 gcccaaaatt gtcgccagat acatctgcga aaaagcatta gcggtaacga cgacgctgtg
      961 ctcgcggcca atctcacggg attccataaa gccgggctct ccaccgccca aaagaatgat
     1021 ggcattatac ttacccgact cgcaagcttc gcggacgcac tcaatccggg ccgtcgcggc
     1081 gtaggcgaat tcttcccggg tctcgaccga ccaattgcca tatggcggct cagcgcccgg
     1141 atgcagatcc caatcaacgt cttccaaatg ctttaagaca aaatcgctat tgagcaaccg
     1201 ctgaaccttg ggcgcatccg ccggttccga gtaggcaggc acggtaaatt ggttctggtc
     1261 cggcagatga aacggtggga ccaatataaa tttaaatttg gcttcagagc tcatcaattt
     1321 tccccatata cttgctttga ttgggctgac cgtttcggtc atagccatct ggcaacatga
     1381 attatcaggc gcacccaatt agttcaaacg aattagcctg gacgtctcac catgtgagcc
     1441 agttccttgt cccgcctatc tcccaacttc tttaccaatt tcggcgatga tacttcttac
     1501 ccagctatga gccggtgaat gatgggtccg attgttccag aattgatata gcgagactcc
     1561 ggtttcgaac ggacttggta atattttaag gttagcgggt aatagtctgc cgaggatgga
     1621 gcttttgttt caatttcagc aaccagagct gaatcgggcg gcggaatatg ggtatatcca
     1681 aggcgatcaa aagcaagccg acagagatca ttcagaagtc aagtattggc agaaagccaa
     1741 acataccgcc gatgatcaac aggataccgg ccagggtgcg aaggccaggc tttaatttac
     1801 gcaaacccag atagttggtg tggcgcagcg cccgtaagat agaggattgc caatttggcg
     1861 gttgtttttg cactaggcca aattcgcggc aagtgattga aggtcttcgt cagtgggaaa
     1921 gcgcccttcg ctctttttcg aaaaaacgag ctgtccatcc acggttattt caaacatccc
     1981 gccaccacca gctaccaaat cgatgtcggc ttgaaggagt tcgttcagtt gttccctcac
     2041 acggagggca cgcggttcat agtttcattg ggcgcaatat tcgatggata tcttcaaact
     2101 acaatgtccg ttcctgttaa ttggtctaga tagtattatt ttgcctgaat atttgccaat
     2161 tcgaggcttt tgtaccatat atctgtctaa tcctgcatct cggtaggtgc gtgaagggtt
     2221 ccatgttaaa atagtgcacg tagattagtc aaattaggtt ggaaatttgc gaaaagtaaa
     2281 ttgctttaga ggtttggcag gaggcgcttt gtt
//
LOCUS       DASCNL010000706         1190 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001434235, whole genome shotgun sequence.
ACCESSION   DASCNL010000706 DASCNL010000000
VERSION     DASCNL010000706.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1190)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001434235"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            183..>1190
                     /locus_tag="QF359_09395"
     CDS             183..>1190
                     /locus_tag="QF359_09395"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO87163.1"
                     /translation="MTEALIGFAILIVFVFLRIPIAFAMGLVGVAGFAFLSGWGPSLA
                     MVGTRFSETALSYGLSVVPMFILMGNLVSKAGLSAELFSASHAFLGHRRGGLSMATIV
                     ACGGFSAICGSSLATAATMSKVAYPEMRRYGYAESLSTASIAAGGTLGILIPPSVILV
                     IYGLMTETSIRELFAAGFLPGLLGILLYLCAVQFVVWRNPEAGPRVVKMDWGERMQAL
                     KGVWGTMLLFILVIGGIYGGIFTPTEAAGVGAGGGFLLALARGVRSFRDYFEVLVDSA
                     RTSAMLFTVLFGAMLFSNFVNRAGLPDGLLSMVTGFNVSPLVVIFIIVAIYIVLGCIF
                     ES"
BASE COUNT          238 a          297 c          309 g          346 t
ORIGIN      
        1 ccgcgcacaa aggcctggtc aatcttcagg gtatcaaaag gtaatttcgt caaataagcc
       61 aggcttgaat atcccgcgct atataaaagg tcaggggcca ctatcacccg gtcatgatgg
      121 atcagatcat gacgacccaa aatcaactta atttatgatt taaccagtag ataggattgc
      181 cagtgactga agcccttatc ggatttgcca tccttattgt ttttgttttt ctacggatac
      241 ctatcgcatt tgccatgggt ttagtcggcg ttgccggctt tgctttcctc agcggctggg
      301 gaccttcatt ggctatggtc ggcacacgtt tttccgaaac cgccttgagt tacggtctgt
      361 cggtcgtacc gatgttcatc ctgatgggta atttggtctc taaagccgga ctatcagctg
      421 aattatttag tgcctcgcac gcttttcttg gccaccgccg gggcggcctg tcgatggcaa
      481 ccatcgtcgc ttgcggcggc ttcagcgcga tctgcggctc aagcctggca acggctgcca
      541 ccatgtcaaa agtcgcctat cccgaaatgc gccgttatgg ctacgctgaa agcctatcga
      601 ccgcctcaat tgccgccgga ggcacgctgg gtattttaat cccacccagc gttattctgg
      661 ttatttatgg cctcatgacc gaaaccagca tccgcgaact gtttgccgcc ggattcctac
      721 caggattgtt aggaattcta ctctatcttt gtgccgtaca gtttgtcgtc tggcgaaatc
      781 ctgaggccgg cccccgcgtt gtcaagatgg attggggtga acgcatgcag gcgctcaaag
      841 gagtttgggg cactatgttg ttgtttattc tggtgatcgg cggcatctat ggcggtattt
      901 tcacgccaac tgaagctgca ggtgtcggcg cgggtggtgg atttctgcta gcactcgcca
      961 gaggtgtgag aagcttccgc gactattttg aagttttggt tgatagcgcc cgaacttccg
     1021 ccatgctgtt cacggtgctg tttggcgcta tgttgttttc gaacttcgtc aatcgcgctg
     1081 ggctaccaga cggtctttta agtatggtta ccggatttaa cgtgtcgcca ctcgtggtaa
     1141 tttttattat cgttgcaatt tacattgtac tcggctgcat atttgaaagt
//
LOCUS       DASCNL010000707         1724 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001436354, whole genome shotgun sequence.
ACCESSION   DASCNL010000707 DASCNL010000000
VERSION     DASCNL010000707.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001436354"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            221..586
                     /locus_tag="QF359_09400"
     CDS             221..586
                     /locus_tag="QF359_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87164.1"
                     /translation="MKDSRDLVVTVRNKGSLGVVWQEAAARIYFTKMIQFFGYMIGVL
                     VLTLLIGQKIFMPIYMAIYLIRRGQYRPKLAVGYAFGGYLVLVAFYDRAMHLLWHPSW
                     LDSWASELLSDWLQRWLFF"
     gene            complement(590..1093)
                     /locus_tag="QF359_09405"
     CDS             complement(590..1093)
                     /locus_tag="QF359_09405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87165.1"
                     /translation="MRKLSFSLILLLGFVSFYAQAAEEDQPPYGVVFGQIYDAMEHKT
                     LKRRGNVRSVKLRTADRPTDTEELRAEICDEYGLQIITWRSYIRSLSSAAARHVEITE
                     EFTVKYGKPKLRRGSAFWQAKGFVVVAKIRSKDKIHQNQIRYFGPKNEPCFEKLIIHQ
                     QQQLKNK"
     gene            complement(1096..>1724)
                     /locus_tag="QF359_09410"
     CDS             complement(1096..>1724)
                     /locus_tag="QF359_09410"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJO87166.1"
                     /translation="TRPAWHQRKGPFLENLATADVAPEDVDFVMCTHLHADHVGWNTR
                     LVDGAWQPTFPNAQYLFAEKEFNHWQLEHEKHPTEPILSGSYIDSVLPVMASGQAQLV
                     ASNHQIASGIHMEAAYGHTPGNIIIHIEDTDSHVILCGDAIHHPVQLIHPEWSTNFCS
                     DPEQSRATRMAFLSDYADTQTAILPAHFQAPDYGRIERDGKSFRLAGH"
BASE COUNT          403 a          394 c          462 g          465 t
ORIGIN      
        1 taaataaaac acgcagtgag atcagtcaca ccatctttta ggcggcattt gagagttttt
       61 cgcgaccatg cggcctatcc aatcccagtt cagggccttt gggtatgatg ccgtttgtcg
      121 caatcggccc gccaagcaaa tagatgcgtt tttacatcaa tacgatatca ctgacttcag
      181 cgacaccggg aatttggtat agatcgcgct ttatacattg ttgaaggaca gccgagacct
      241 tgtcgtaacg gtgcgcaaca aaggcagttt gggtgtggtt tggcaggaag ccgcggcaag
      301 gatttacttt accaaaatga tccagttttt cggctatatg attggcgttt tggtgctgac
      361 attgttgatt gggcaaaaaa tcttcatgcc gatttatatg gcgatctacc ttatccgcag
      421 gggccaatac agacccaagc tggccgttgg ctatgcgttt ggaggatatt tagtgctcgt
      481 cgcgttttat gatcgggcga tgcatctgct ctggcatccg tcctggctcg attcctgggc
      541 gtcggaactt ctgtcggatt ggctgcagag gtggttgttt ttctaaacgt tatttgtttt
      601 taagctgctg ctgttgatgg ataatcaatt tctcaaaaca gggttcattt ttgggaccga
      661 aatagcgaat ttggttttga tgaattttat ctttgctgcg aatttttgcg acaacgacaa
      721 aacctttcgc ttgccaaaaa gctgaaccac gccgaagttt tggtttgccg tattttaccg
      781 taaattcctc ggtgatctcg acatgccggg cagcagcgga gctaagcgag cggatatagc
      841 tgcgccaagt gatgatctgc aggccgtact cgtcacatat ttcggcgcgc aattcttcgg
      901 tatcggtggg ccggtcagca gtacgaagct tgactgagcg gacattgcca cggcgcttta
      961 aagtcttgtg ttccatcgcg tcgtaaattt gaccaaacac cacgccatag ggcggctgat
     1021 cttcttctgc ggcttgggca taaaaagaga caaagcccaa cagtaaaatc aaactaaagg
     1081 ataacttgcg catgcctagt gaccggcaag ccgaaagctt ttgccgtcac gttcgatccg
     1141 gccgtagtcg ggcgcttgaa agtgtgccgg caaaattgcc gtctgagtat cagcatagtc
     1201 gctcaaaaaa gccatccggg ttgcgcgaga ttgctctggg tcagaacaga aattcgttga
     1261 ccattcggga tggattagct gaaccgggtg atggatagcg tcgccacaga ggatgacatg
     1321 gctatcggtg tcttcgatgt ggataatgat attgcccggt gtgtgaccgt aggcggcttc
     1381 catatggatg ccagaagcaa tttgatgatt acttgcgacc aattgtgctt gccccgacgc
     1441 catcaccggc aagacactgt cgatatatga gccagataaa attggctccg ttgggtgttt
     1501 ttcatgctcc agttgccagt ggttgaactc cttttcggca aatagatatt gcgcgttcgg
     1561 gaaagtcggc tgccatgcgc cgtcgacaag cctagtgttc cagccaacat gatcggcatg
     1621 taaatgggtg cacatgacaa aatcaacatc ctcaggtgct acatcagccg tggcgagatt
     1681 ttcgagaaac ggtcccttgc gctggtgcca ggctgggcgg gttg
//
LOCUS       DASCNL010000708         1647 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001442652, whole genome shotgun sequence.
ACCESSION   DASCNL010000708 DASCNL010000000
VERSION     DASCNL010000708.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001442652"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="QF359_09415"
     CDS             <1..522
                     /locus_tag="QF359_09415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HJO87167.1"
                     /translation="GFMKPPFVVKPYNEGSSVDVHIVMDGDNYEPSKKEWSFGRSVMV
                     EKFIPGRELTVSVLEGQALAVTEITTGHDFYDYDAKYADGGSQHQVPADIPKDIYDEA
                     TRISVLAHESLGCRGVSRADIRYDGTDLFMLEVNTQPGMTPTSLVPEQAAYANISFNE
                     LVSWLVENAATDD"
     gene            535..1491
                     /locus_tag="QF359_09420"
     CDS             535..1491
                     /locus_tag="QF359_09420"
                     /inference="COORDINATES: protein motif:HMM:NF015739.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HJO87168.1"
                     /translation="MAWFSKSDAATKKATSKRGQKRRRVKPLWRSPLFVTVYVLVITS
                     SASLAGWCVWQSGWVQTTVERVKWIVIAGAAKTGFSVREIFVEGRFETPRKSLLKALR
                     LERGAPILAFDPQAARERVEALPWVRQAVIERQLPDVVHLQLNERHPMALWQRGGKFT
                     LIDTNGELIPLKDVSNYTNLIVVIGKDAPRHAAVLFEVLATEPKLASRVKAAVRVGAR
                     RWNLHLNNKIKIQLPEDDPGAAWSHLAELNQKHALLARNLISVDLRLADRIVIREVKK
                     GSPDEKFNIVPNLPKQKQKPKLRPFNRPNRHPGGRLISERDT"
BASE COUNT          425 a          375 c          451 g          396 t
ORIGIN      
        1 ggcttcatga aaccaccatt cgtggtgaaa ccatataatg aaggttcgag cgttgacgtt
       61 cacattgtca tggatgggga caattacgag ccgagcaaaa aagaatggtc ttttggccga
      121 tccgtgatgg ttgagaaatt tattcccggc cgcgagctta ccgtgtcggt tttggagggg
      181 caagctttgg cggtcactga aatcaccacc gggcacgact tctatgatta tgatgccaaa
      241 tatgccgatg gaggctcgca acaccaagta cccgctgata ttcccaaaga tatttatgac
      301 gaagcgacgc gaatctctgt gctggctcat gagagtctgg gttgtcgggg tgtgtcgcgc
      361 gctgacatcc gctatgacgg cactgatctt tttatgctgg aagtgaacac tcagcccggc
      421 atgacaccga catccttggt gccagaacag gctgcctacg caaatatttc gtttaacgag
      481 ttggtaagct ggctcgtgga gaatgcagct actgatgatt aatggcgata gataatggca
      541 tggtttagca aatccgatgc cgccactaaa aaggcaacta gcaagcgcgg ccaaaaacga
      601 aggcgcgtga agccattgtg gcgaagtcca ttgtttgtta ccgtctatgt gttggtgatt
      661 acctctagtg ccagccttgc tggttggtgc gtctggcaaa gtggctgggt gcaaacaacg
      721 gtcgagcgtg ttaaatggat agtaattgct ggggccgcaa aaaccggctt ctcggtacgt
      781 gaaatatttg ttgaaggccg tttcgagacg ccccggaaaa gtctcttgaa agcactgcgg
      841 cttgagcgtg gggcaccgat tctggccttt gatccgcaag cggcgcgtga gcgggttgag
      901 gctctacctt gggtacgcca agcggtgatt gaacggcagt tgccggatgt agttcatctg
      961 caattgaatg aacggcaccc catggccttg tggcaacgcg gtggaaaatt cactcttatt
     1021 gatactaacg gcgaattgat cccgctaaaa gatgtcagca attacactaa tttgattgtc
     1081 gtgattggca aggatgcacc gcgacatgca gcggtacttt ttgaagtatt ggcaactgaa
     1141 cccaaattgg cgagccgggt taaagccgcc gtccgggttg gtgcgcgccg ctggaatctt
     1201 cacctcaaca acaagatcaa aatacagctg ccggaagatg atccgggcgc ggcttggagt
     1261 catttggctg agctcaatca aaaacatgca ttactggccc gcaacttaat tagcgtggat
     1321 ttgcgtctgg ccgatcggat tgtcatccgt gaagtcaaaa agggctcgcc ggatgaaaaa
     1381 ttcaatatcg taccaaattt gccgaaacaa aagcaaaaac caaaattaag gccatttaac
     1441 cgacccaacc ggcatccggg tggccgcttg attagcgaaa gagatacgta aagttgaaaa
     1501 catgatacag aaagcgttat ctaaatcagc caaccgaact ggccttatta ccgccttaga
     1561 tatcggcacg accaaggttg tgtgttttat tgcccgccct ttggaaaatg gtgatgctga
     1621 ggtaattggc gtcgggcatc aagtgtc
//
LOCUS       DASCNL010000709         1474 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001443799, whole genome shotgun sequence.
ACCESSION   DASCNL010000709 DASCNL010000000
VERSION     DASCNL010000709.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1474)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1474)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001443799"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1298)
                     /locus_tag="QF359_09425"
     CDS             complement(<1..1298)
                     /locus_tag="QF359_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HJO87169.1"
                     /translation="MATKRMLIDAAHPEEIRVAVMDGNQLEELDVESAARRQLKSNIY
                     LAKVTRVEPSLQAAFVDYGGNRHGFLAFREIHPDYYQIPVADREELLAEELAASDNDD
                     ADDDIDEETSENGNDQENDGKTVETVGGDDIDEVETRRKFFPAKRYKIQEVIKRRQIL
                     LVQVVKEERGNKGAALTTYMSLAGRYCVLMPNTGKGGGISRKISNGSDRKRLKTIISD
                     FDIPDGMAVIVRTAGADRSKAEIKRDYEYLIKLWSSVRDLTLESTAPAMIHEEASIIK
                     RAVRDHYSRDVAEVIVEGEEGYRTAKDLMKMLIPSHAKKVQPYKDTTVPLFNRYHIES
                     QLETMNSANVQLKSGGYIVINITEALVAVDVNSGRATRGRNIEETALKTNLEAANEVA
                     RQLRLRDLAGLVVIDFIDMEIHRNQTAVEHRLKEAMRKDRA"
BASE COUNT          325 a          376 c          357 g          416 t
ORIGIN      
        1 gcgcgatctt tacgcatcgc ttctttaagg cggtgttcca ccgcagtctg gttgcgatga
       61 atttccatgt cgatgaagtc gatcaccacg aggccagcca aatcgcgcaa gcgtaattga
      121 cgggcaactt cgttggcggc ttcgagattg gttttaagcg cggtttcttc gatattacgc
      181 ccgcgcgtcg cccggccaga gttcacgtcg accgcgacca gggcttcggt aatatttatc
      241 acaatgtagc cgcctgattt tagctgcaca ttagcactgt tcattgtctc aagctggctc
      301 tcgatgtgat agcgattaaa cagcggcacg gtggtgtctt tatagggctg aactttcttg
      361 gcatggctcg gtatcagcat tttcatgaga tccttggccg tccggtaacc ttcttcacct
      421 tcgacaataa cctcggcgac atcgcggcta tagtgatcgc gcacggcccg cttaattata
      481 cttgcttctt catggatcat ggcaggagcc gtagattcca aagtcagatc acgcacgctg
      541 ctccataatt taatgagata ttcgtaatcg cgtttgattt cagctttgct gcgatctgca
      601 ccggcagttc taacgattac agccatacca tccggaatgt cgaaatctga aataattgtt
      661 ttgaggcgtt tgcggtcgct accattagag atcttgcggg aaatcccgcc gcctttgcca
      721 gtgttaggca tcaagacaca atagcgtccg gccaaggaca tatatgtcgt tagtgcggca
      781 cctttattgc cacgttcttc tttgacgacc tgcaccagca aaatctgacg gcgtttgata
      841 acttcctgga ttttatagcg tttagccggg aagaacttgc ggcgcgtttc aacttcgtcg
      901 atgtcatcgc cgccgacggt ttctaccgtt ttgccgtcat tttcctgatc attgccgttt
      961 tcgctagttt cttcgtcgat gtcgtcatcg gcatcatcat tatcagatgc agccaattct
     1021 tcagccaaca gttcctctcg atcggcgacc gggatttgat agtagtctgg atgaatttct
     1081 ctaaaggcga gaaaaccgtg acgatttccg ccatagtcga caaacgctgc ttggagagac
     1141 ggctcgactc gtgtgacttt ggcgagataa atattgctct ttaactgacg ccgggcagcc
     1201 gattctacat caagttcttc gagttgattc ccgtccatga ccgcgactcg gatttcttcc
     1261 gggtgggcgg catcgattaa cattcttttg gttgccattt acttgtaaac tccgaatatg
     1321 caaacgcacc cgatcagata gatccatggt gtgccgcatt atgttttgag aaaagcttgt
     1381 ggcgccaacg gacaggtcaa cacgagaggg cacaatgttc gccaacatta cgaacggcaa
     1441 tgcatatgtg ttatctgtac gggctgctct caca
//
LOCUS       DASCNL010000710         1723 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001443905, whole genome shotgun sequence.
ACCESSION   DASCNL010000710 DASCNL010000000
VERSION     DASCNL010000710.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001443905"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1405)
                     /locus_tag="QF359_09430"
     CDS             complement(<1..1405)
                     /locus_tag="QF359_09430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HJO87170.1"
                     /translation="MPPPILILRDINLTFGGTPLLEGAELSVFEHDRICLVGRNGSGK
                     STLLKIAAGLVEPDNGEVFVQPGITVRYLPQEPDFAGFATTLRYAEAGLAPGDDPHRA
                     AYLLAQLGLTGKEDPNQLSGGEARRVALARVLAPEPDIILLDEPTNHLDVEAIEWLEN
                     EFKSIRSALVMISHDRRFLENLSRTTIWLSLGATRRLDQGFQSFQSWRDEILEQEELD
                     RHKLDRKIVREEHWLRFGVTARRKRNVRRLKDLYNLRQQRREQRVDDGTVKMAVTKAM
                     SSGKLVFEAEGISKTFDGRPIVKNFSTRVLRGDRLGFVGPNGAGKTTLLKMLTGELTP
                     DEGSVRPGAKLEMVSLDQRRESLKPNWSLSDALTGGGSDMVFIGDQPRHVVAYMKDFL
                     FQPEQAPTLVSALSGGERGRLLLARAFARPSNLLILDEPTNDLDLETLDLLQELIADY
                     NGTVLLVSHDRDFLDCIV"
BASE COUNT          413 a          494 c          416 g          400 t
ORIGIN      
        1 tgacaatgca gtcgagaaaa tcccggtcat ggctgaccag cagaaccgta ccgttataat
       61 cggcgatcaa ttcctgcaac aaatcaaggg tctcgagatc aagatcattg gtcggctcat
      121 ccaggatcag taaattcgag ggccgggcaa aagcacgcgc cagcaacaac cgccctcgct
      181 cgccgcctga caaggcgctg accaaagtcg gcgcttgctc gggctgaaac aaaaagtctt
      241 tcatataggc aacgacgtgg cgcggttgat caccgataaa taccatgtca ctgccgccgc
      301 cggttaacgc gtcgctcaaa ctccaattag gtttgaggct ttcccggcgc tgatccaaac
      361 tgaccatttc caatttggca ccgggccgca ctgacccttc atccggtgtc aactcaccgg
      421 tcagcatttt caacagcgtt gtcttacccg ctccattggg gccaacaaaa ccaagccggt
      481 caccccgcaa cacccgagtc gagaagtttt tgacaatcgg ccgcccgtca aaggtttttg
      541 aaataccctc agcctcaaag accagtttgc cggacgacat tgccttggtt accgccattt
      601 tgaccgtccc gtcatcgacc cgttgctcgc gccgttgttg gcggagatta tagaggtctt
      661 tcagacgccg cacattgcgc ttgcgcctcg ccgtcactcc aaaacgcagc cagtgttctt
      721 cacgcacgat tttgcggtca agtttatggc gatcgagttc ctcttgttcc agtatctcat
      781 cccgccagga ctgaaaggac tgaaagccct gatccagtcg ccgggtcgct cctaaactta
      841 gccagatcgt tgttcgcgat aagttttcca aaaacctccg atcgtggctg atcatcacca
      901 gtgctgagcg gatggatttg aactcgtttt ccagccattc gatcgcttcc acatcgagat
      961 gattagtcgg ctcatccagc aaaataatat ccggctccgg cgccagcacc cgcgccaagg
     1021 caacgcggcg tgcttcacca ccggaaagct ggtttgggtc ttctttacca gtcaagccga
     1081 gttgcgccag caagtaggcc gcccggtggg gatcatcgcc cggcgccagc cccgcttcgg
     1141 catagcgaag cgtcgttgca aagccggcaa aatctggttc ttgcggcaga tagcgcacgg
     1201 tgataccggg ttggacaaag acttcaccgt tatccggctc aaccagccca gcggcgattt
     1261 tcaacagtgt tgatttaccc gagccattgc ggccaaccaa gcaaatccgg tcgtgctcaa
     1321 ataccgaaag ctctgcccct tcaagtagcg gggtgccgcc aaaggtcaaa tttatatcgc
     1381 gtaaaataag gatgggtggt ggcataagag gtgtatgtat agccgcgaga ccctctgtgc
     1441 aagggtccaa aaggctggcc aaaatttact acaaatttta gagcatcttt tttctgaccc
     1501 gtccgctagt gtccccaaaa ttatctggat actcgaaagg atgccgacag tgtcaacttt
     1561 ggtttatatc tcccaggccg cggcaaaatg atcaattttc ctcagatttt tgccaatatt
     1621 ctctactatt ttgaatttat tttgcgtacg atggagcatg aaatggaggc taaaccacct
     1681 acagaacttc gccacattgg caacaggcat ttgcgcgata ttg
//
LOCUS       DASCNL010000711         1283 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001444396, whole genome shotgun sequence.
ACCESSION   DASCNL010000711 DASCNL010000000
VERSION     DASCNL010000711.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001444396"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(81..>1283)
                     /locus_tag="QF359_09435"
     CDS             complement(81..>1283)
                     /locus_tag="QF359_09435"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HJO87171.1"
                     /translation="NGKNAEQAGLNCMSEQNPDLLKIVVSVHGRWHGFDLANGLHQRG
                     YLARLLTTYPASVAAKFLPLGVPVMAAPWLELRRRFYEKFPFGGKPDLAIAKAFGKFA
                     CRHAVGQVDVLVGWSSATLEAIPLAHEFGTKVVIERGSSHIAHQTEVLSAAYQEFGLD
                     FAGTQPEMIVREEQEYAAADAITVPTQFAASTFTERGLGEKLIVNPYGVDLTRFSPNA
                     EPNQNTKPRILFVGSVGIRKGVPWLLRAFEGLSNFAELHLIGPVEKGFEKILTQYNMA
                     SVTLRGALASDQLPAELKAADIFCLPSLEEGFPLSMLQAMASGLPVITTRETGAEDII
                     EPGVEGLVLPSKDSTGLTEALRPLVNNAEQRHQMSIAARRRVEQGFSWDDYIDRAIAA
                     YHALVAAT"
BASE COUNT          313 a          362 c          308 g          300 t
ORIGIN      
        1 atcagtggtt tctcaaaaat atctctgatt agcagccgtt caaattttgc tttttcacca
       61 gccgacattg atcccagccg ctacgtcgcc gccaccaacg cgtgataggc cgcaattgca
      121 cggtcgatat aatcatccca gctaaagccc tgctcaaccc ggcggcgagc ggcgatactc
      181 atttggtggc gctgttccgc attattaacg agtggtctga gagcttcggt taagccagtg
      241 ctatcttttg acggcagaac cagtccctca acacctggtt caataatatc ttcagccccg
      301 gtttccctgg tggttatgac cggcaatcca ctagccatgg cttgcaacat cgataatggg
      361 aaaccttctt caagtgatgg caggcaaaag atatcagcag ctttaagttc agctggtagt
      421 tggtctgaag caagcgcccc tcttaacgtc acgctggcca tattatactg cgtcaatatt
      481 ttctcaaacc ccttctccac tggaccaata agatgcagct cagcaaaatt tgaaaggcct
      541 tcaaaagcgc gcagcagcca cggcacgcct ttgcggatac cgacgctgcc gacaaagagg
      601 atgcgtggct tggtattttg gttcggctcg gcgtttggcg agaatcgcgt taagtcgaca
      661 ccgtatggat tgacgataag tttttcaccc aagccgcgct cggtaaaggt tgaggcggca
      721 aactgcgttg gcacggtaat cgcatcggcc gccgcatact cctgctcctc acgtacaatc
      781 atttccggtt gggtgccggc aaaatccagc ccaaactcct gataggccgc agacaaaact
      841 tcagtctgat gggcaatatg gctggaacca cgctcgatca ccactttcgt gccaaactca
      901 tgggccaacg ggatggcttc aagcgtggct gaactccagc cgaccagcac atcaacttga
      961 cccaccgcat gacggcaggc aaatttacca aaagctttgg cgattgccag atcaggtttt
     1021 ccaccaaatg gaaatttttc gtagaaccgg cggcgtaact cgagccaggg tgcagccatc
     1081 actggcacgc ccaagggcaa gaattttgcc gccactgatg ccgggtaagt tgtcaacaaa
     1141 cgggccaaat atccccgctg gtgcagaccg ttcgccaagt caaagccatg ccaccggcca
     1201 tgcacggaga caacaatttt taacaggtct gggttttgct cactcatgca attcaggcct
     1261 gcttgctcag cattttttcc att
//
LOCUS       DASCNL010000712         3473 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001445746, whole genome shotgun sequence.
ACCESSION   DASCNL010000712 DASCNL010000000
VERSION     DASCNL010000712.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3473)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3473)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3473
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001445746"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..529
                     /locus_tag="QF359_09440"
     CDS             <1..529
                     /locus_tag="QF359_09440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87172.1"
                     /translation="RLVLTPDAETPDNPTFARIKNLEFHNGVIEIEVAGRPLPDAIPE
                     ARGFIGVAFRIKDDLSAFECMYLRPTNGRAEQQLRRNRATQYFSYPDWKFDRLRTEVP
                     GHYEAYVDLVTGAWTKMRIEVKGNKAKLFVHDNEHPTIIVNDLKHGPDLAGGIGLYID
                     NGTEGFFKNLMVTQG"
     gene            557..820
                     /locus_tag="QF359_09445"
     CDS             557..820
                     /locus_tag="QF359_09445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87173.1"
                     /translation="MSRKRARVVITSGSLESVEDGSGNADYSPFAMAFLDALNANNDV
                     LDSTKLFNTIRHPVMVNINQTPQYSDVRRAGHDGGDFLFVRRR"
     gene            complement(828..2114)
                     /locus_tag="QF359_09450"
     CDS             complement(828..2114)
                     /locus_tag="QF359_09450"
                     /inference="COORDINATES: protein motif:HMM:NF012575.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HJO87174.1"
                     /translation="MLEESRNELLMNVGAGTPMGELLRRYWMPIGAVTEFDGKETKPV
                     RLMGEELVLYKDLSGTFGLVDRHCPHRHADLSYGFVEETGLRCNYHGWLFDEKGDCVG
                     QPYEDTVDPEQKLRAGCSVKAYPVEEKAGLLWAYLGPDPVPLVPNWEPFSWQNGFVQI
                     VFTEIPCNWFQCQENSCDPVHFEWMHANWTKRLKEDGSDYVPTHLEVAFEEFEYGISY
                     KRVREDTDKKNPLWTIGRHCLWPNALYTGDHFEWRVPVDDDTTLSVGWFFNRVPNEME
                     PYVQESIPHWYGPLVDEETGRWITSHVMNQDFVAWVGQGARSDRTQEHLGRSDRGIAM
                     IRKRFLDDIKAIENGDDPKAIVRDEKVNECIKFPLIGSEVMINGYPKAELENLDSPLV
                     RSKRQFIFQAGQPEHVTKAYEVAIGIKADKGGLTGG"
     gene            complement(2142..2777)
                     /locus_tag="QF359_09455"
     CDS             complement(2142..2777)
                     /locus_tag="QF359_09455"
                     /inference="COORDINATES: protein motif:HMM:NF015682.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HJO87175.1"
                     /translation="MRLNKLSTSTVSDAMDRLGIAGQCLGIKPVDVKFRLCGRAYTMR
                     TVPAEVVAGSVGDYIDDVPAGAVVVIDNGGRQDKTVWGDILTFLAEKNGVAGTVIDGN
                     CRDIHRCIEINYPVFSRGWSMRTGKDRVQLDQINIPVSIGDARVEPDDLLLGDADGVL
                     AIPKEHEDRVVELAEEIEAAEEKIMEALRQGKKLYDARMEFKYHELQRRED"
     gene            complement(2801..>3473)
                     /locus_tag="QF359_09460"
     CDS             complement(2801..>3473)
                     /locus_tag="QF359_09460"
                     /inference="COORDINATES: protein motif:HMM:NF015682.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87176.1"
                     /translation="PTMSDLAVERLRKIDSCAVSDALDALQLKGTVMGLSSISVLRRI
                     AGRVQTVKLGKASPDIPKKHLCSSAVNAARPGDVIVVENHATDFAAGWGGILSTAAAA
                     KGLSGTIVDGPARDADESRDVDYPVFARAATPFTARGRIAEHDWNIQIDVGGVVVNPG
                     DLALADGSGVVFVPQAQEEDVLDKAEEIQAKEAAMAAAVQAGKPVSDVMGGDYENMLV
                     TKDSK"
BASE COUNT          845 a          992 c          787 g          849 t
ORIGIN      
        1 ccgtctggtg ctgacaccgg atgctgaaac acccgacaat ccgacttttg cccgcatcaa
       61 aaacctcgaa ttccacaatg gtgttatcga gattgaagtg gccgggcggc cgttgccgga
      121 tgccatcccg gaggcacgcg gttttatcgg cgtcgctttc aggatcaaag atgatctttc
      181 agcttttgag tgtatgtatt tgcggccaac caatggcaga gccgaacaac agcttcgccg
      241 caatcgcgcc acccagtatt tttcctatcc cgattggaag tttgatcgcc tccgcaccga
      301 agtgccgggc cattatgaag cttatgtcga cctcgtcacc ggggcttgga ccaaaatgcg
      361 gattgaagtt aaaggtaata aagccaaact gtttgtccat gacaacgaac atccgacaat
      421 catcgtcaac gatcttaagc atgggccgga tttagctggc ggaattggtc tctatatcga
      481 taacggcacc gaaggttttt tcaagaattt gatggtaacc caaggctagc ccgatattaa
      541 aaaagtaatg cagaaaatgt cccgcaaacg ggcgcgtgtg gtaattacct cgggtagttt
      601 ggagtcggtc gaagacggca gcggtaacgc tgactattcg ccttttgcga tggcattcct
      661 ggacgccctc aatgccaaca atgatgtatt agatagcacc aagcttttta acaccatccg
      721 ccaccctgtt atggtgaaca ttaatcaaac accgcaatat tcagatgtcc gccgtgccgg
      781 acatgatggc ggcgatttct tgtttgtacg gcggaggtag gcgagcgtca tccccccgtc
      841 agaccgcctt tatcagcttt aatacctatc gccacttcgt aagctttggt tacgtgctcc
      901 ggctggccgg cctgaaaaat aaactggcgc tttgatctaa ccagcggcga gtccagattt
      961 tcaagctccg ccttggggta gccgttgatc atcacttccg agccaatcag cggaaactta
     1021 atacattcgt tgactttttc atcgcgcacg attgccttcg ggtcatcacc gttttcaatc
     1081 gctttgatat cgtccaaaaa gcgttttcgg atcatggcga taccacggtc actgcggcct
     1141 agatgttcct gggtacgatc agatctggca ccctgcccaa cccaggcgac aaaatcctgg
     1201 ttcatcacat gggaggtgat ccagcggccg gtttcctcgt caaccaatgg gccataccaa
     1261 tgcggaatgc tttcctggac ataaggttcc atctcgttcg gcacccgatt aaagaaccag
     1321 cccacactca acgtggtgtc atcatcaacc ggcacccgcc actcgaaatg atcaccggtg
     1381 tagagcgcgt ttggccacaa gcaatgacgg ccaattgtcc acagaggatt tttcttgtcg
     1441 gtatcctccc gtacgcgttt gtagctgatg ccatattcga attcttcaaa cgccacttcc
     1501 agatgagttg gcacataatc ggagccgtct tctttcaagc gcttagtcca gttggcatgc
     1561 atccattcga aatgcaccgg atcacaggaa ttttcctggc attggaacca attgcaggga
     1621 atttcggtaa aaacgatttg aacaaatccg ttctgccaag agaacggctc ccaattcggc
     1681 accagcggca cgggatcagg accgagataa gcccacaata agccggcttt ttcctcaacc
     1741 ggataggctt tgacgctgca gccggccctt agtttttgct cgggatcgac cgtatcttcg
     1801 taaggctggc cgacacagtc gcctttttcg tcaaaaagcc agccgtgata attgcagcgc
     1861 agcccagttt cctcgacgaa cccataggac agatcagcat gacgatgcgg gcaatggcga
     1921 tcgactagac cgaaagtacc actgaggtcc ttgtatagca caagctcttc acccatcagg
     1981 cgaacgggtt tggtttcttt gccatcaaat tcagttaccg caccgattgg catccaataa
     2041 cggcgcaaca gctcacccat tggcgtaccc gcgccaacgt tcatgagtag ttcattccta
     2101 gattcttcaa gcattttcac attccctaat ttattttttt attagtcttc ccggcgttga
     2161 agttcatgat atttaaactc catccgcgca tcatacaatt ttttgccttg gcgcagcgcc
     2221 tccatgattt tttcttccgc cgcttcaatt tcttcggcca gttcaacgac acgatcttca
     2281 tgctcttttg ggatcgccaa tacaccatcg gcgtcaccca gcaggagatc atcaggctcc
     2341 actctagcat caccgattga aaccggaata ttgatctgat ccaactggac ccggtcctta
     2401 ccagtacgca tcgaccagcc gcggctgaaa actggataat ttatctcaat acagcggtgg
     2461 atatcccgac aattgccatc gatcaccgtg ccagcaacac cgtttttttc ggctaaaaat
     2521 gtcaggatat caccccagac agttttgtcc tggcgtccgc cattatctat tacaacgacc
     2581 gcaccggcag gcacatcatc aatatagtct ccgaccgagc cggcaacgac ttcggccggc
     2641 accgtccgca tggtataggc gcggccacag agccggaact ttacatcaac cggtttaata
     2701 ccaagacatt gaccagctat gccgagccgg tccatggcat cacttaccgt cgaggtcgac
     2761 aatttattta agcgcactat gatttcttcg cccattttat ttacttacta tccttggtga
     2821 ctagcatgtt ttcataatcc ccacccatga catcactgac cggcttgccg gcctgaacag
     2881 ctgcagccat ggcggcttcc ttggcctgaa tttcttctgc tttatcaagc acgtcttctt
     2941 cctgcgcttg aggcacaaaa acgacgccgc tgccatcggc caaggccaga tcaccaggat
     3001 tgaccacgac accaccaaca tcgatttgaa tattccaatc atgctcagca atgcggccac
     3061 gcgcagtaaa cggggtcgcc gcccgggcaa agacaggata atcaacatcc cgactttcat
     3121 cagcatcccg cgccgggcca tcgacaatag tgccggataa tcctttagcc gcggctgccg
     3181 tcgataatat gccaccccaa cctgcagcaa aatcagtggc gtgattttca accacaatca
     3241 catcacccgg ccgagccgca ttaaccgccg aagagcacaa atgctttttc gggatatcgg
     3301 gactggcttt accgagtttg acggtctgca cacgcccggc gatgcggcgt aaaaccgaga
     3361 tcgaactcaa tcccataaca gtgcctttta gctgcagcgc atccaaggcg tctgatacgg
     3421 cacagctatc gatcttacgc agtctttcga cagctaagtc actcattgtt gga
//
LOCUS       DASCNL010000713         1661 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001447475, whole genome shotgun sequence.
ACCESSION   DASCNL010000713 DASCNL010000000
VERSION     DASCNL010000713.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001447475"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(114..644)
                     /locus_tag="QF359_09465"
     CDS             complement(114..644)
                     /locus_tag="QF359_09465"
                     /inference="COORDINATES: protein motif:HMM:NF020965.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyloxyacyl hydrolase"
                     /protein_id="HJO87177.1"
                     /translation="MTRSALKLLIGLLVAFAVMPLVLPAAPVWAQDGKKDDPAFLSFG
                     AGYYDFNRRKETGAEFRVEYRSDKKFAIFKPFAAASYTSTQQGFVGAGVLIDLFLGRR
                     FVMTPSFAPHYYWGGNSKLDLGHALEFRSQLELAYRFDNRARLGVAISHYSNASIGNT
                     NPGTETVTLYYSLPLQ"
     gene            complement(787..>1661)
                     /gene="pip"
                     /locus_tag="QF359_09470"
     CDS             complement(787..>1661)
                     /gene="pip"
                     /locus_tag="QF359_09470"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HJO87178.1"
                     /translation="MYWEVSGNPDGIPVVFLHGGPGAGAAPSHRRFFDPEHYRIVIFD
                     QRGSGRSRPFADINNNTTQYLISDMEVLRQHLNIDKWLVFGGSWGSSLALAYGIEHTE
                     RVSGFILRGVFLCSQKELEWFLDGIKAVFPENWREFSEFLPAEERADLLGFYHKRLVD
                     PDHQIHEPAARMWARFEGACSTLLPSSRSVSELDSGRASLALARIEAHYFVNDLYLSD
                     DYFIDNIDRIRHLPGTIVQGRYDMVCPIGTADALAKELPEMNYVVVPDAGHSAMEPAM
                     RSALVAATERFKMR"
BASE COUNT          446 a          438 c          419 g          358 t
ORIGIN      
        1 ctctatccga ctgagctacg aggacccaat gataacaagt gtgataatac gcggacaacg
       61 atagcttata tcacagccac gctggtcaac aattttaaaa ctcgggaaat atcttattgc
      121 agcggcaggg agtaatagag cgttaccgtt tcggtgccgg gattggtgtt accgatgctg
      181 gcatttgaat aatgcgagat ggcgacgcca agccgtgccc ggttatcaaa ccgataggcc
      241 agttccaact gtgatctaaa ttccagggcg tgacccaaat caagcttgct gttgcctccc
      301 caataataat gcggtgcaaa agacggtgtc atgacaaagc gccgacccag aaaaagatca
      361 atcagcacgc ccgcgccaac aaagccctgc tgggtgctgg tgtaagatgc ggcggcaaag
      421 ggtttgaaaa tagcaaactt tttatccgag cggtattcaa cacgaaattc cgccccggtt
      481 tctttgcggc ggttaaaatc gtaatagccg gcgccaaaag acagaaaagc cggatcgtct
      541 tttttgccgt cttgagccca aacaggcgca gcgggcaata ccagcggcat tacggcgaag
      601 gccaccaata gtccgatcaa taattttaac gcactgcggg tcacggttaa gtttcaccta
      661 agttgaattt gtatcagtaa tgtcgggcat cttacggttg attgggccaa atgcaagaaa
      721 atgatgcaag aaaatatcgg tctttctgaa tgacttagcg ctttttagtt taattttggc
      781 ctattattaa cgcattttaa atcgctcggt tgcggcgaca agagcggacc gcatcgccgg
      841 ttccatcgcc gaatgaccag catccggtac caccacatag ttcatttccg gcaattcttt
      901 ggccagagca tcagccgtcc ctatcgggca gaccatatcg tagcggcctt gaacgatggt
      961 cccgggaagg tggcgaatac gatcaatatt atcgataaaa taatcatccg acagatagag
     1021 atcattgaca aaataatgcg cctcgatgcg ggctaaggcg agtgaagctc ggccggaatc
     1081 gagctctgag acactgcggg atgacggcaa tagcgtcgag caggcgcctt caaagcgcgc
     1141 ccacatgcgg gcggcgggtt catgaatttg atggtccgga tcaaccaaac gcttgtggta
     1201 gaatccaagc aaatccgcgc gctcctctgc cggcaaaaat tcgctaaact cccgccaatt
     1261 ttccggaaat actgctttga tcccatccag gaaccactcc agctctttct gactgcagag
     1321 aaaaacaccg cgcaagataa agccggacac ccgctcggta tgttcgatac cgtaggcgag
     1381 cgccagggac gatccccagg aaccgccaaa caccagccat ttatcaatat tgagatgttg
     1441 ccgcagcact tccatatcgc tgatcagata ctgggtggta ttattgttga tatcggcaaa
     1501 cggccttgag cggccgctgc cgcgctgatc aaaaatcacg atgcggtaat gctcgggatc
     1561 aaaaaaccgc cggtgcgacg gcgccgcgcc cgcgcccggc ccgccatgca gaaagaccac
     1621 cgggataccg tccgggttac ccgagacctc ccaatacatt t
//
LOCUS       DASCNL010000714         2385 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001449918, whole genome shotgun sequence.
ACCESSION   DASCNL010000714 DASCNL010000000
VERSION     DASCNL010000714.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001449918"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="QF359_09475"
     CDS             <1..416
                     /locus_tag="QF359_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014625960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cobyrinic acid a,c-diamide synthase"
                     /protein_id="HJO87179.1"
                     /translation="MLSSSYDHIIFDLGAGVERTVRNLANQAETVLVITTDEPTALTD
                     AYAFIKLTHMERPNIDLRIVVNMANSTNEGERTYNTILKACQGFLKFSPPLAGVVRRD
                     TKVRETIHNQTSILVRFPNTEAATDVGNIVDKLIG"
     gene            complement(869..2014)
                     /locus_tag="QF359_09480"
     CDS             complement(869..2014)
                     /locus_tag="QF359_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase"
                     /protein_id="HJO87180.1"
                     /translation="MKHQHVAVVGAAETTEMGVIPNLTELQLHADAALNALADAGLTT
                     ADIDGIACAGVAPDVLASYLGVTPTWIDGTHIGGSSFMLHVRHAMVAIQAGHCKTVII
                     THGESGRSAVGAAGFPEFFAGRLGGEFEVPYGGNIPPTMFTIPALRYLKEFDLTIEDL
                     AQVAVAQRKWAALNPRATFKDPITIDDVLNSKMIAYPFTLLMCCLRTDGGGALILTSA
                     DRAKDFSQPPVYILGTGESCEGPMISQMEDYTTSRAFRVAGEIAFAEAGIERDDVDHV
                     MIYDAFAHVPLYGLEDLGFCKPGEAAGFIRDGHTSLGGKLPTNTNGGGLSYMHSGMYG
                     MYAMQESVRQIRGLAPAQVPGAKISVALGIGGMFSVSGTIIFGNELP"
     gene            complement(2020..>2385)
                     /locus_tag="QF359_09485"
     CDS             complement(2020..>2385)
                     /locus_tag="QF359_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HJO87181.1"
                     /translation="SQHFWDGTKEGELRLQRCGECGKSYFPPRPFCPFCSSRNVLVYP
                     ASGQATLYSYVINHLPTPGFDGPHAVAVVTLEEGPRMMTNIVDCEQTPDTLVLDMPLE
                     VTFERQNDDITLPLFKPAS"
BASE COUNT          609 a          612 c          606 g          558 t
ORIGIN      
        1 ccatgctgtc atcttcatat gatcacatta tattcgacct tggtgccggc gttgaacgga
       61 cggtacgcaa tttagccaat caagcggaaa ccgttctggt tattacgacc gacgaaccga
      121 ctgctctcac cgatgcttac gcctttataa aattgaccca tatggaaaga cccaacattg
      181 atctgcggat cgtggtgaat atggcaaatt cgactaacga aggagagcgg acctacaaca
      241 cgatcctcaa agcttgccag gggtttctca aattttcacc acctttagcg ggtgttgtcc
      301 ggcgtgatac caaggtccgg gaaacgatcc ataaccaaac gtcaattctc gtccgcttcc
      361 ctaataccga agccgccacc gacgtaggaa atatagtcga caagctcatt gggtgatgaa
      421 tgacgaccat tcttcctcag gcccaacacc tcttcatagt tgccccccaa acgctatatc
      481 ttccaaacac catataacgg aatgcgtgta atttttagag cgtattgcaa tcgtttgacg
      541 gttggaggag taaaaaatac tatgccgata cgttaacatt aagatcagtt atgagcgtag
      601 ggagactgtt gatttcatgt ggtatgttta cttcctagaa cttggcaaca gtgacatcta
      661 tgtcagcgtg gaaaatgaaa agaatgtgcg tgacctggga aaatacttta aatcgagatc
      721 aggcaaagct tttgccaaaa agagattttt ctaattacgg atcctcaata catataattg
      781 gtgttcgagc cgaagcgtgt taaacgagcg caggccggtg agccaaactt atttggcgag
      841 ataatccctt tccctcaacc cttattatct atggtagttc gttgccgaag ataatcgtgc
      901 cgctgaccga gaacataccg ccgataccga gcgccacgga tatcttggcg ccgggcacct
      961 gggccggtgc aaggccacgg atttgccgga cactttcctg catggcatac ataccgtaca
     1021 tccccgaatg catgtagctc agtccgccgc cattggtatt ggtcggcaat ttgccaccaa
     1081 gtgaggtatg accgtcgcgg ataaagccag ccgcttcacc gggcttacaa aagccgaggt
     1141 cctcaagacc ataaagcggc acgtgggcga aggcgtcata gatcatgacg tgatcgacgt
     1201 cgtcgcgttc aatgccggct tcggcaaagg ctatctcgcc ggcgacccga aaagcgcggg
     1261 acgtggtgta atcctccatc tgacttatca tcggaccttc acagctttcc ccggtgccta
     1321 agatgtaaac cggtggctgg gaaaagtctt tagcccggtc ggcagatgtc aggattaagg
     1381 cgccaccgcc gtcggtacgc aggcagcaca tcaacagcgt gaacggataa gcgatcattt
     1441 ttgaattcag gacatcgtcg atggtgatcg ggtctttgaa tgtcgcccgc ggatttaaag
     1501 ccgcccattt gcgttgagcc acggctacct gcgccaagtc ttcaatagtc aggtcaaatt
     1561 ctttcaggta acgtagcgcc gggatcgtaa acatggtcgg tggaatgttg cccccataag
     1621 gcacttcaaa ctctccacct agccggccgg cgaaaaattc ggggaaccca gcggccccga
     1681 cagcggagcg gccactttca ccgtgggtaa taataacagt tttacagtga ccggcttgga
     1741 ttgccaccat ggcgtgacgg acatgcagca tgaatgaact gccaccaata tgcgtgccat
     1801 cgatccaggt cggcgttact cccaaatagc tcgccaaaac atcaggtgcc acaccggcac
     1861 aagcaatacc gtcgatatcg gcggtagtaa gtccggcatc cgctaaagca ttgagcgcgg
     1921 catcagcgtg gagctgcaat tcagtcaggt tggggataac acccatttcc gttgtttcgg
     1981 cagcgcctac cactgctaca tgttgatgtt tcattgttgt taactcgcgg gtttgaatag
     2041 aggaagtgta atatcatcat tttggcgctc gaaagtaacc tcaagcggca tgtccaaaac
     2101 gagggtatct ggtgtttgtt cgcagtcgac gatgttggtc atcatgcgcg gcccttcttc
     2161 aagggtcacc actgcaacag catgcgggcc gtcaaagccg ggcgtgggga ggtggttgat
     2221 aacgtaactg taaagcgttg cctgaccgct tgccgggtaa accaatacat tacggctgct
     2281 gcaaaaaggg caaaaagggc ggggtggaaa ataggatttt ccgcattcgc cgcatcgctg
     2341 cagccgtaat tcaccctctt tggtgccatc ccaaaaatgt tgaga
//
LOCUS       DASCNL010000715         1196 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001450746, whole genome shotgun sequence.
ACCESSION   DASCNL010000715 DASCNL010000000
VERSION     DASCNL010000715.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001450746"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(762..>1196)
                     /locus_tag="QF359_09490"
     CDS             complement(762..>1196)
                     /locus_tag="QF359_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO87182.1"
                     /translation="EYANQPTYGTDSADFAVHTYEDRSSVEIIPAEDFFLGYYNHTPM
                     HRRSENTINKDNVLGNFDERFNSLDEQQVIDEAERCLSCGMCFECDNCLVYCPQDAIT
                     RVAKDKRAMGRYVETDYTKCVGCYICADVCPSGYINMGLGGD"
BASE COUNT          315 a          296 c          257 g          328 t
ORIGIN      
        1 tcttcggtca gtccgaactg catctctggc tcctaagtct ttgtactacg gtcgacgcgg
       61 ccatcatggt ttaaaattag tgctttccca accgaaataa tcggttaaat gaagcttgtg
      121 agatattttg accttaaaat agtaattagg tactttaata ccaaattaca gagaaaatac
      181 aagagctttt gagaatatct accctattaa tcaaattcgg ttgagtgtgg aaagcgacta
      241 aattattgtg gtgtggtgcc acgctacgac tgcaaactga tcaaatccaa tttagcggag
      301 cggcccatac gatcaggcgc tatcagtcta tagccatttc cgcacgcagc cattcacaca
      361 atttagcagc cagttgacgt tcgccccctc tttccgatga atggagctcg cccaaccgcc
      421 gagcaagagt gactaaaatt ttctcgcagc gctccagaga gcgcgtttcc atcataaaat
      481 tggtgatcag cttatggaat tttgcttcca ggtgctcccg agattattct tccagatcgg
      541 tccgcagcgg ctttgaagtg tcctctctaa tacaacgaac acggtccaat atctcggatt
      601 cgcaaagact gagggcaggg gcgattgctt ttaccttttc gaaatcgacc atgccttcaa
      661 atgctggaag cactaacctg ctcgttcagt tcagagcgct gttttgatgc ccgtgaaacg
      721 ctgatcatat tttccatacc tactaccctc ctaatctttg attaatctcc tcctaaaccc
      781 atattaatgt aacccgacgg acacacgtca gcgcaaatat agcagccgac gcatttagta
      841 taatcagtct cgacatagcg gcccatggct cgcttgtctt tggcaactcg ggtgatggcg
      901 tcctgaggac aataaacaag acagttatcg cattcaaaac acatgccgca gctcaaacag
      961 cgttcggcct cgtcaatgac ctgttgttca tccaggctat taaatcgttc gtcaaaattg
     1021 ccaagcacat tatctttgtt aattgtgttc tcgctgcgcc ggtgcatggg cgtatggtta
     1081 taatagccga ggaaaaagtc ctcagccgga ataatctcaa ccgatgatct gtcctcataa
     1141 gtgtgaacgg caaaatcggc gctatcggtg ccgtaggttg gttggttggc atattc
//
LOCUS       DASCNL010000716         4505 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001457693, whole genome shotgun sequence.
ACCESSION   DASCNL010000716 DASCNL010000000
VERSION     DASCNL010000716.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4505)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4505)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4505
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001457693"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1489
                     /locus_tag="QF359_09495"
     CDS             <1..1489
                     /locus_tag="QF359_09495"
                     /inference="COORDINATES: protein motif:HMM:NF014899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87183.1"
                     /translation="FNEWKVTGAGGGLSIVSNTSIMARYYTGLVLIVLSTFAVWYLLR
                     SRYGQALTAVRDDEEAANSIGIDIRRVKTLVFLVSAPMAGLAAGLFYIDNVTITPSDA
                     FSIRWSAVVVFVVVAGGMGSLAGPIVGAVIFVIVDRVVSGYIGSGELALGVFSVLIII
                     LLPRGVMGVVNDLRQSDKKRKHRVRTGPSGFGPPNIGKSKISAVKSPEDWKAEQVASP
                     SLPPGLVSVFLVPGSPLPYLRPDNPPWVPIMEAFKTVQQALEASRPDVILVYSTQWAA
                     VLDQLWQSRPRLHGIHVDANWYEYGDLPFDISIDRPLAERLGKASQAAGVSSKTVDYD
                     QFPIDSGTIVANNMLNPDGRIPLVIAANNMYHDFDTTRRLGALAVKEAIADGRRVALV
                     GVGGMSGSIFREEINIADDRIIDATDDRWNQKILELMAHGDHMQLEKVMAEYASEAKA
                     DMGFKHFAWLLGGMGNNWLGARVHAYGPVYGSGAAVVEFELPTGE"
     gene            complement(2060..3022)
                     /locus_tag="QF359_09500"
     CDS             complement(2060..3022)
                     /locus_tag="QF359_09500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HJO87184.1"
                     /translation="MAVRKVTAKSLIYYTAEPAVLKAIEDWQRWMMVEKNYSQHTMDA
                     YGRDLAAFFGYLGNHLGFTPGLGDLENLTTTDFRGYLAKRHNDGLSRSSTARAVSTLR
                     NFFKFLDRHELAHNAAIKAVKTPKLPRSIPKPLSEVEAREALLSIGDLHDTPWIAARD
                     IAILTLLYGCGLRISEALNLNVEDVPDGDAVVITGKGKKQRVVPVLPIVLDAIQYYLD
                     LYPQRLKKNGPLFVGVQGKRVNSGVIQRQVRKLRAYLGLPASATPHALRHSFATHLLA
                     GGGDLRTIQELLGHESLSTTQRYTEVDQARLIKVYRDSHPRARN"
     gene            complement(3004..3714)
                     /locus_tag="QF359_09505"
     CDS             complement(3004..3714)
                     /locus_tag="QF359_09505"
                     /inference="COORDINATES: protein motif:HMM:NF016243.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 family protein"
                     /protein_id="HJO87185.1"
                     /translation="MNSKSEARKVDASYVTEYLRENPDFLKENPELLEVISPPSRWED
                     GEAGNVVDMQTSMLDRMRDESSNLKDAANLLISTTRSNMMIQTHTHAAVIAILGADNL
                     ERLVHVVCFDLPLLLDIDVASLCLETGEEGSLELGETDIRWLAPGTVDNVLGGPDEFA
                     KLIEHIKDDGSVFGETAGIVKSAALGRLQPGYGIPNGMLALGSRNRGAFHGGQGTDLL
                     IFVTRVLELTLNRWLSEK"
     gene            complement(3735..4391)
                     /gene="fsa"
                     /locus_tag="QF359_09510"
     CDS             complement(3735..4391)
                     /gene="fsa"
                     /locus_tag="QF359_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HJO87186.1"
                     /translation="MKFFIDTADVGEIRELAETGMIDGVTTNPSLIAKSGRQFTDVIE
                     EICSFIDGPVSAEVAAIDAPTMIKEAHKLAKIAKNITIKVPLTVDGLKTCKILSSEGT
                     MVNVTLCFSPGQAILAAKAGATFISPFVGRLDDISQDGMDLIADICEIYENYTDFETE
                     VLVASVRSPKHVVDAARMGAHVVTIPPSALRQLYNHPLTEKGLDSFLKDWAGTGQSIL
                     "
BASE COUNT         1061 a         1083 c         1150 g         1211 t
ORIGIN      
        1 gtttaacgaa tggaaagtga caggcgctgg tggcgggctg agcattgtct ctaatacatc
       61 catcatggcg cgttattata cgggcttggt cttgattgtt ctatctacct ttgccgtttg
      121 gtatttatta cgcagtcgat acggccaagc tttgaccgcg gttagagatg atgaagaagc
      181 agctaactca atcggcattg atatccgtcg ggtgaagacg ctggtcttcc tagtttcagc
      241 gccgatggca gggttggcgg cagggctttt ctacattgat aacgtcacca tcacgccgtc
      301 cgatgcgttc agtatacgct ggtccgcggt cgtggtattc gtcgtcgttg ctggcggaat
      361 gggaagtttg gccgggccga ttgtcggtgc ggtcattttt gttattgttg accgcgtcgt
      421 atcaggatat atcggctctg gtgagctggc acttggtgtt ttctcggtgc tcatcattat
      481 tctactcccg cgcggtgtga tgggcgttgt taatgatctt cgtcaatctg acaaaaagcg
      541 aaagcaccgc gtgcgcactg gcccatctgg ctttggccca cccaatatcg gcaagtcgaa
      601 aataagtgct gttaaatcgc cggaagattg gaaggctgaa caagtcgcaa gcccttcttt
      661 gccgccagga ttggtgtcag tatttttggt gccgggcagc ccactgccat acctacgccc
      721 agataatcct ccttgggtac caattatgga agcttttaag acagtccaac aggcactcga
      781 agcttctcgt ccggatgtta ttctcgttta ttctactcaa tgggcggcgg tgcttgatca
      841 gctttggcaa tctcgcccgc gccttcatgg cattcacgtt gatgccaatt ggtatgaata
      901 tggtgatctg ccctttgata tttcgatcga caggcctttg gcggagcgac ttgggaaagc
      961 cagtcaggca gcgggcgttt cgtccaaaac agttgactat gatcagttcc caatcgatag
     1021 cggcacgatc gttgctaata atatgctcaa tccagatggc cgaattccct tggtaattgc
     1081 tgccaataat atgtatcacg attttgatac aacgcggcgt ctcggtgctc tcgccgttaa
     1141 agaagctatc gctgatggtc ggcgcgtggc cttagttggc gttggcggga tgtctggctc
     1201 tatcttccgc gaagaaataa atatcgccga tgatcgcatc attgatgcga cggatgatcg
     1261 ctggaatcaa aaaattctcg aacttatggc tcacggtgat catatgcagc tggaaaaagt
     1321 gatggccgaa tatgcctcag aagccaaagc agacatgggc ttcaaacatt tcgcctggct
     1381 cctcggtggt atgggtaaca actggctcgg cgctcgtgtc catgcctatg gcccagttta
     1441 cggcagtggt gcagcggttg tcgagtttga actcccgact ggggagtaag cgggttaaat
     1501 tcgatccctg attataaaat ttacttccct gttatcgcag taaaattctc agttaaatta
     1561 ttagggaatt tggaggtaaa ttgaggctag gcttgctcct ttgatctttt agacgtgtga
     1621 atttaattca gaatttacaa tattccctat attttccctg ttaaacaggg aagtctggtg
     1681 gagacagttt cgctgctgac tgcgtccacc gccatataat caacttaact tattgtttta
     1741 tattattttt ttatcttaat tataattata cccccaaact accccccatt ttatttgatt
     1801 ttgcatggta aacacacctc tattggctag acgcacgggt gcacgtcttt ctgagccatc
     1861 aaggtgtgtg gggattaaga tttcatgggt gccttatagt gccgattagc ttagagtgta
     1921 atagagtgat taaacgccgt gcgctcacgt tccagctcac tggatttttt ttgatggtta
     1981 tgtttggtgg atttttcgcc ctggcgtggt ttttaaacga cgtgatagcg ctgatcgcca
     2041 gataaatctt agaagaaatt tagttccggg cgcgcggatg agagtcccgg tagaccttaa
     2101 tgaggcgtgc ctgatcgacc tcggtatagc gctgggttgt cgacagtgat tcgtgaccga
     2161 gtaactcctg aatggttcta aggtcaccgc cgccagctaa taaatgggtc gcgaaactat
     2221 ggcggagcgc atgaggtgtt gccgatgcgg gcaatcctaa ataagcccgc aatttccgga
     2281 cttggcgctg gataacgccg gagtttaccc gcttgccctg aacgccaaca aaaagtgggc
     2341 cattcttttt taaacgttgg gggtagagat ccaggtaata ttggatcgcg tccagcacaa
     2401 ttggcagcac cggcacgacg cgttgctttt tgcctttacc ggtaattacc acggcgtctc
     2461 cgtcaggcac atcctcaaca ttcagattaa gcgcttcgct gatgcgcaat ccgcagccat
     2521 aaagcagcgt caaaatcgca atatcgcgcg ccgctatcca aggcgtgtcg tgcagatcgc
     2581 cgatgctcag gagggcttct cgcgcctcca cttcggataa gggtttgggg atgctgcgcg
     2641 gcagttttgg tgttttaact gctttgatgg cagcattatg ggcgagttcg tgacgatcca
     2701 gaaatttaaa aaaattgcgt aaagttgata ctgcacgggc ggttgaggag cgtgaaaggc
     2761 cgtcattatg acgtttggcg agatagcctc taaaatccgt tgttgtcaga ttttcgagat
     2821 cacccaagcc cggcgtgaaa ccgagatgat tgcctaaata tccaaaaaaa gcagcgaggt
     2881 cccgcccgta agcatccatg gtatgctgag agtaattttt ctcaaccatc atccagcgct
     2941 gccaatcctc aatcgccttg aggacagcgg gttcggcagt ataatagatt aagctttttg
     3001 ccgttacttt tcggacagcc atcggttaag cgttagctcc aacacgcggg taacgaatat
     3061 cagcaaatct gtgccctgac cgccgtggaa agcaccgcga ttacgcgatc ccagggctag
     3121 cataccattg gggataccat aacccggttg caaccggccc aacgctgctg attttacgat
     3181 gccggcggtc tcaccaaaca ccgagccgtc atctttgatg tgttcaatca gcttggcgaa
     3241 ttcgtcgggg ccgccgagaa cgttatcgac ggtgccgggg gccagccagc ggatatcggt
     3301 ctcacccaat tcgagggaac cctcttcacc ggtctccagg caaagcgagg cgacatcaat
     3361 atccagcaat aggggcagat caaaacagac gacgtgaacc aatcgctcca aattgtcagc
     3421 gcccaaaatt gcgataaccg ctgcatgagt gtgggtttgg atcatcatat tggagcgggt
     3481 tgttgagatc agcagattgg cagcgtcttt aagattgctc gattcatcac gcatacggtc
     3541 gagcattgaa gtttgcatat caaccacatt gccagcttca ccatcctccc agcgcgacgg
     3601 cgggcttatg acctccaaca gttccgggtt ttctttcaga aaatcaggat tctcacgtaa
     3661 atattctgta acgtaggagg catctacctt acgtgcttct gatttgctgt tcataattta
     3721 ccccctttat tccctcataa aatcgattga ccagtccccg cccaatcttt caggaacgag
     3781 tctaacccct tttcggttaa cggatggtta taaagttggc gaagcgcaga cggtggaata
     3841 gtgacgacat gggcacccat gcgggcggcg tcaacgacat gtttgggcga gcgcacggag
     3901 gcaaccagca cttcggtctc aaagtcggta tagttttcgt aaatctcaca aatatcggcg
     3961 atgagatcca tgccgtcctg gctgatatca tcaagccggc cgacaaacgg ggaaataaag
     4021 gtcgccccgg ctttggccgc caaaatcgcc tgccccggtg aaaagcagag cgtcacattg
     4081 accattgtgc cttcgctgga caatattttg caagttttca aaccatcaac cgtgagcggg
     4141 actttgatgg tgatattttt agcgatcttg gcgagcttat gagcttcctt gatcatggtg
     4201 ggtgcgtcga ttgcggcaac ttcggcactg acgggtccgt cgataaatga acaaatttcc
     4261 tcaatcacat cggtaaactg gcggccagat tttgcgatta gggacggatt tgtggtaacg
     4321 ccatcaatca tcccggtttc ggcaagttct cgaatttcac caacatcggc agtatcaata
     4381 aaaaatttca tgatctctga ttctactcct tagatagtcg atgattgttc tttgattgat
     4441 aacagctaaa gtgtaccgca tgacaggtaa cagcaccaca tcacttgatt ttggcgacga
     4501 ccctc
//
LOCUS       DASCNL010000717         1567 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001461544, whole genome shotgun sequence.
ACCESSION   DASCNL010000717 DASCNL010000000
VERSION     DASCNL010000717.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001461544"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1201
                     /gene="mutS"
                     /locus_tag="QF359_09515"
     CDS             <1..1201
                     /gene="mutS"
                     /locus_tag="QF359_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043743125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HJO87187.1"
                     /translation="EVSTRQAEAMPAGPEDIFIHRQTMKNAVRYTTVELGELEGKIAS
                     AANKALAMELELHDDLVQNTTAQAEEIALAASALARLDVASALAGLAVDQRYCRPSID
                     DSLNFEIIGGRHPVVEVALAQDPNLEGAGSFVANDCNLGDISQLWLLTGPNMAGKSTF
                     LRQNALITVLAQIGSFVPAESVQLGIVDQLFSRVGAADDLARGRSTFMVEMVETAAIL
                     SQATERSFVILDEIGRGTATFDGLSIAWATVEHLHEVNKSRALFATHYHELTNLASKL
                     DGLTCHTMRVKEWKGTVVFLHEVATGAADRSYGIHVGQLAGLPEAVIARAENVLAALE
                     EGDQAGAVTRLTDDLPLFAARSKSPRSREPEISALEQELDAILPDELSPKEALDLIYK
                     LKKLRDK"
     gene            1282..>1567
                     /locus_tag="QF359_09520"
     CDS             1282..>1567
                     /locus_tag="QF359_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87188.1"
                     /translation="MNQITQIGQKRKIIDRLEVIERLDAVLGGKAYKSLKRPELVAIL
                     KAALRDGKAEVQRRFEAGGRGSEVVHGNSFLVDQLVRIIYDITVSRAYRVS"
BASE COUNT          362 a          390 c          448 g          367 t
ORIGIN      
        1 tgaagtgtcg acgcgccagg cggaagcgat gccagccggg ccagaagata tattcattca
       61 tcgtcaaacc atgaagaatg ccgtccgcta caccaccgtc gaactcggcg agttggaagg
      121 caagatcgcc agcgctgcca ataaagcact cgctatggag ctggaactcc atgatgatct
      181 ggtgcaaaac acgacagccc aggcggaaga gattgcactg gcggcgtcgg ctttggcgcg
      241 gcttgacgtt gcctctgcat tggctggttt ggcggtagat cagcgctatt gccgtccctc
      301 gatcgatgac agcctgaact ttgaaattat tggtgggcgc catccggtgg tcgaagtagc
      361 cttggcccaa gaccccaacc ttgagggtgc gggcagtttt gtcgccaatg actgtaattt
      421 gggtgacatt agtcaattgt ggttgctgac cggcccgaac atggccggta agagcacatt
      481 tctccggcaa aatgccttga tcacagtgct ggcgcaaata ggttccttcg tgccagcgga
      541 aagcgttcaa cttggcatcg tcgatcaatt attctcgcgg gtgggggcag ctgatgatct
      601 ggcgcggggc cgttcgacct tcatggttga gatggtcgag accgccgcca ttctaagcca
      661 ggcaaccgag cgctcctttg ttatcttgga tgaaattggc cgtggcacgg caacttttga
      721 cgggttgtct attgcttggg cgacggtcga gcatcttcat gaagttaata aatcccgcgc
      781 gctgttcgcg acccattatc acgagcttac caatctggcg tcgaagcttg atggcctgac
      841 atgtcacacc atgcgggtta aggaatggaa aggcactgtg gtatttctcc acgaagtcgc
      901 gactggagcg gctgaccggt cttacggtat tcatgtcggg caattggccg gcttgccaga
      961 ggcggttata gcgcgcgccg aaaatgtttt ggcggcattg gaagaaggcg atcaggcagg
     1021 cgccgtgaca cgattaaccg atgatctgcc gctctttgcc gccaggtcta aatcgccacg
     1081 ttctcgtgaa cccgaaattt ccgccttgga gcaggagctg gatgcaattt tacccgatga
     1141 gcttagcccc aaggaagcgc tggatctgat ttacaaactt aagaaactta gggataagta
     1201 gctgcaaaat tcccgccctc gaaaaactcg atttaatccc ctatattggc tgcaatagag
     1261 ttctttaaga gatagattcg aatgaatcaa atcacccaaa ttgggcaaaa gcgcaaaatt
     1321 atcgaccgtc ttgaagtaat cgagcggctt gacgcggtgc tgggcggtaa ggcatacaaa
     1381 tctttaaagc gtcctgagct ggtggcaatc cttaaagcgg cactacggga tggtaaagcc
     1441 gaagtgcagc ggcgctttga ggcaggtggc cggggcagtg aagttgtcca cggcaattcc
     1501 ttcctggtcg atcaattggt gcggatcatt tatgacataa ccgtttcccg cgcttaccgg
     1561 gtttcca
//
LOCUS       DASCNL010000718         3436 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001462298, whole genome shotgun sequence.
ACCESSION   DASCNL010000718 DASCNL010000000
VERSION     DASCNL010000718.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3436)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3436)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001462298"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="QF359_09525"
     CDS             complement(<1..253)
                     /locus_tag="QF359_09525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87189.1"
                     /translation="MSNKLLTSLSIGAVAGLIAFSPTNTSAQGILKGDTGGVGSVNHT
                     FMIIMSTVLQKKIGINLQVNEGQTLTKSALKLGQGKIDVS"
     gene            complement(834..1772)
                     /locus_tag="QF359_09530"
     CDS             complement(834..1772)
                     /locus_tag="QF359_09530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87190.1"
                     /translation="MHIKLYSPAPGHTETHRHNVALADLITKSDVAMTACATSLAWPD
                     SINRLSDVAPESKAAQLVLVNHFDFLCAVEQKGPDWHSYDRANTDLKFVANLFGSGIG
                     FLTADPVIKSPNDVIGKRIYVLARPSAVRAIAEIVLRDGWGILDQVELLDGQPALGSE
                     ASAIGNGDVLLVSTIETQGGYKLVAPLSEGTYPPMNWIDIDEQAINRMTAATGVTFDR
                     RVHPPLKDRAHLPFDQGAEPEAGLVRFDEGLSAWDGTAPGVVAKLLSLFVAEGNRWNE
                     STGSVPFDAKRLRNWSPLDDSYIHQGAKQFYTDNGL"
     gene            complement(1982..2698)
                     /locus_tag="QF359_09535"
     CDS             complement(1982..2698)
                     /locus_tag="QF359_09535"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HJO87191.1"
                     /translation="MPHNFQMPKKYVDRMVERLGREHVQETFDTEKTALVVVDMQNYF
                     MDENQPAGCPVGTTIVDNVNHIADTVRRTRGIVIWIQNLAPDDTPTSWKTAHERYSTE
                     KAEIRIKSMARGEWPFELWPTLDVRDADHLVIKRRYSAFIQGSSDIELILKDNGIENI
                     LVCGVATNVCCESTARDAMMLNYRTLMVSDGCATFSDEEHANALIAFYTHFGDVQNTE
                     ELCARLEASNRRNVTADSTR"
     gene            complement(2823..2969)
                     /locus_tag="QF359_09540"
     CDS             complement(2823..2969)
                     /locus_tag="QF359_09540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87192.1"
                     /translation="MVCWRDEIFVDRLTAETDDHLADFFGNGFELRCVGATRDQRAAE
                     IIGT"
BASE COUNT          897 a          826 c          792 g          921 t
ORIGIN      
        1 tcgacacgtc gatcttgccc tggccaagtt taagggctga ttttgtcaag gtttggccct
       61 cattcacctg caaattgatg cctatttttt tttgcagaac cgtcgacata atgatcatga
      121 atgtgtgatt cactgaacca acaccgccgg tgtcaccttt caatatgccc tgcgcggacg
      181 tgttggtcgg actgaaggca attaggccgg cgacggcgcc aattgacaaa ctagttaata
      241 atttattgga catttgttct gttctcccta ttgaacgttt attagccgtt atttactgta
      301 aagtgcatta ttcttagact tacggcttct aacttgctaa cttgcatgaa ttattcatca
      361 aagcaaatta ttagaattca tatattatat aagaaaattt aattaattga gcatgtattg
      421 ctactaaaat tcttaaatct gtatagcgca ctctgcatta gaagtccgcc ttgatttcat
      481 cgccacaaaa gaatctacct aaaactatgg cattatcacg ttaacatcca ataggcacat
      541 aaaatcggta gcgtttcttc taggcttcag atcgatctcg ccctggcagt ggcggtgctg
      601 ataattgatc ccttaatcca ctggccggcg gcaggatttg ccctagattt cctggtttgg
      661 cattggctga aatttcgctc ggtcagaccg gcgccaccgg acgcggctgt ttagatggac
      721 ttaagtgatt aggtcgcttt tggactttac caaccactcc atcctcactt ccagcagatt
      781 gccggcgcag ccgagcaaga tgcccctgga aggtccgcgt cttggttagt gagttagagt
      841 ccgttatcgg tataaaactg tttggcgcct tgatggatat aggaatcgtc caggggcgac
      901 cagttcctca accgtttggc atcgaacggc acactgccgg tgctttcgtt ccaacggttt
      961 ccctcggcga cgaataggct gagcagttta gcaactacgc cgggagccgt gccgtcccaa
     1021 gcgctcaaac cttcatcaaa ccggacaagt cccgcttcgg gctcagcgcc ttggtcaaag
     1081 ggtagatggg cgcgatcctt aagtggagga tggacgcggc ggtcaaacgt cacgccggtt
     1141 gcagcagtca tccggttaat tgcctgttcg tcaatatcga tccaattcat gggtggatag
     1201 gtaccttccg aaagcggtgc aaccaattta taaccccctt gagtttcgat ggtcgagaca
     1261 agtaagacat cgccgttccc gatcgcggaa gcttcagaac ccagtgcagg ctggccgtct
     1321 agcagttcga cctgatccag aattccccat ccgtcgcgaa gcacaatctc agcgattgct
     1381 cggactgcgc tgggcctggc caagacgtaa atgcgcttgc cgatgacgtc gtttggagat
     1441 tttatcaccg gatcagccgt cagaaacccg atcccgctgc caaagagatt ggcaacaaat
     1501 ttcagatccg tattcgcgcg atcataagaa tgccagtccg ggcctttctg ctccacggcg
     1561 cagagaaagt cgaaatgatt gaccaggacg agctgagctg ccttggattc cggcgctacg
     1621 tcgctcaggc ggtttatcga atctggccag gcaagagagg ttgcgcaggc tgtcatcgcc
     1681 acatcggatt tggtaatcaa atcggccagc gccacattat gccggtgggt ttcagtatgc
     1741 ccgggtgccg gtgaataaag cttgatgtgc aatggtattt cctttcaaat tattcgcttg
     1801 aatgtaccga atcgcatacc gcttaacaat tcagattggc acgaccttgt agcttgagac
     1861 tgatgatcaa ccattccaca ctaactttag acattttgga aatttaatcc ttatccagca
     1921 ttgataaaga cacgtcgaat gttacgaatc gaggcgctgg cttcaatcaa attgcactgc
     1981 actatcgcgt agaatcagca gtgacgttac gtcggttgga agcttctagg cgtgcacaca
     2041 attcctcagt attctgcaca tcaccgaaat gtgtatagaa ggcaattagc gcgttcgcgt
     2101 gttcctcatc cgaaaaagta gcgcaaccgt cagaaaccat cagcgtgcgg taatttagca
     2161 tcatcgcatc acgcgcggtg gattcgcaac aaacattggt agcaacgcca catacgagga
     2221 tattttcaat tccattgtcc tttaggatta gttcaatatc tgatgagccc tgaatgaatg
     2281 cgctataccg gcgcttgata accagatggt cagcgtcgcg tacatcaagg gttggccaga
     2341 gttcaaacgg ccattcaccg cgcgccatcg atttgatccg tatttccgcc ttttccgtcg
     2401 aatagcgttc gtgcgcggtt ttccacgacg taggagtatc atcgggagca agattctgta
     2461 tccatattac gatgccacgc gtgcgcctta ctgtgtcagc aatatggttt acgttgtcca
     2521 cgatggtcgt gccaacagga caaccagctg gctgattttc gtccatgaag tagttctgca
     2581 tatcaacgac gactagggcg gtcttttcag tatcaaacgt ttcctgcaca tgctcgcggc
     2641 ccaaccgttc caccatccgg tcaacatatt ttttaggcat ttggaaatta tgaggcattt
     2701 gattcctact attaatgatc tcaaagatag accaacagct aaattttttc aatgaagcac
     2761 gggagcacta acattcaacc tggaccactt aagtccgaat aacagggctt ggcaagattg
     2821 ttttaggtgc cgataatttc ggctgcacgc tgatctctcg tggcaccgac acagcggagc
     2881 tcgaaaccgt tgccgaagaa atccgccaaa tgatcatcag tctcggcggt gagccgatcg
     2941 acgaagatct catcacgcca gcaaaccacg aaatcttgtc attcatttga attatgtact
     3001 ccccccatac aatttgtgat gatgacgatt ggttgcgctg aacaaccaga attcttacct
     3061 gaggagtgta acaaaaagta aaatagatac cgttacatgg aaacactttc tttgaatatc
     3121 taaatttttt tgacatccca gccagttggt agatataatt ttatttgaac ggttatcacc
     3181 tacagataat actttagatg ttcacaaaaa ttaaattcga gccgttcgtc gtcagtcaat
     3241 tagtatttaa attggaaaca ttttatatgg ttttagaaat gaacatgaag cagttcaccg
     3301 aagaacaaag gcttatgtgg cagaccactc acgatctgat gaatgatgtg gtgataccct
     3361 gggtgaaaca aaatgtgaac cgtgaatggg aaatggatcc taataagcgt ttgccaatag
     3421 aaatgctcaa ggcaat
//
LOCUS       DASCNL010000719         1220 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001463333, whole genome shotgun sequence.
ACCESSION   DASCNL010000719 DASCNL010000000
VERSION     DASCNL010000719.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1220)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1220)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001463333"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(66..812)
                     /locus_tag="QF359_09545"
     CDS             complement(66..812)
                     /locus_tag="QF359_09545"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004057 - arginyl-tRNA--protein
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016598 - protein arginylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HJO87193.1"
                     /translation="MKHSITQRPTSFFITAPLPCPYLGEKVERRMVTELSGVDSTSLH
                     DTLSRVGFRRSHNLVYAPICQDCCACLAVRTLVEKFEPSASQRRVLRLNNNVIAVEKS
                     AEATSEQYELFSRYQDSRHTGGDMATMDFYDYQALVEETPVETMLVEFKNDAGMLVGG
                     CLVDIMADGFSAIYSYFDPKYHKNSLGTYMILWLIKRAKQLKLPYVYLGYWVGGNQKM
                     AYKDKFLPLEYFAADGWQEFNKKNLLSAVE"
     gene            complement(853..>1220)
                     /locus_tag="QF359_09550"
     CDS             complement(853..>1220)
                     /locus_tag="QF359_09550"
                     /inference="COORDINATES: protein motif:HMM:NF018028.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HJO87194.1"
                     /translation="ISIILGIVFVGLGILGLVTFGVTWGIMGIVLFLIPFAYHTILIG
                     GSQSATFGMRFMELEVRRWIGGQPDYVQAAVQTILFYGSIALTAWFILLVALFGSTGR
                     CLHDYFSGIVVVNKLDALG"
BASE COUNT          374 a          288 c          245 g          313 t
ORIGIN      
        1 tgtgcaacaa aggaacacgc atttgttatc gttaatttga gaggcaatta tgacggaaag
       61 ttaatttatt caacggcaga taacaggttt tttttattaa actcttgcca gccgtcggcg
      121 gcaaaatatt caagtggcag gaacttatct ttgtacgcca ttttctggtt gccgccaacc
      181 caatagccaa gatagacata tggtaattta agttgtttgg cgcgcttgat gagccataat
      241 atcatgtaag ttccgagact attcttgtga tatttaggat cgaaatagct gtaaatggct
      301 gaaaaaccat ccgccataat gtcaaccaaa cacccaccta ccaacatgcc ggcatcattt
      361 ttaaattcaa caagcatagt ctctaccggc gtttcttcaa ccaaggcctg ataatcataa
      421 aaatccattg ttgccatatc tccaccggta tgccgagaat cctgatagcg tgaaaacaac
      481 tcatattgtt ccgatgtcgc ttcagccgat ttttcgaccg caatgacatt attgtttaac
      541 ctgaggacgc gccgttgaga tgctgatggt tcaaattttt caactagggt ccgtacggcc
      601 agacaagcgc agcaatcttg gcaaatcggc gcataaacaa ggttatgact acggcgaaat
      661 ccaacccgcg acaatgtatc gtgcagagat gttgaatcga cacctgatag ctcggtcacc
      721 atccggcgct ctactttttc gcctaaataa gggcagggta atggtgccgt aatgaaaaaa
      781 gaagtcggcc tttgagttat actatgcttc attggatagc tattccgtcg cctttacttc
      841 gatatgctta atttatccta gcgcatctaa tttgttgacg acaacaattc ctgaaaaata
      901 atcgtgcaaa catctgccag tgctaccaaa gagagcaacc aatagtataa accaagcggt
      961 caacgcgatt gagccataaa ataaaatagt ctggaccgca gcttggacgt aatcaggttg
     1021 cccgccaatc caacgcctta cctctaactc cataaagcgc ataccaaatg tggccgattg
     1081 agagccgcca ataagtatcg tgtgataggc gaacgggatt aggaacagga caattcccat
     1141 aatcccccaa gtgacaccaa aggtgaccag ccccaatatc cccaagccaa caaatacaat
     1201 acccaatata atgctaatgg
//
LOCUS       DASCNL010000720         1173 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001467234, whole genome shotgun sequence.
ACCESSION   DASCNL010000720 DASCNL010000000
VERSION     DASCNL010000720.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001467234"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="QF359_09555"
     CDS             <1..525
                     /locus_tag="QF359_09555"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87195.1"
                     /translation="DVTDNLTIETVSRILRAEKIDLLLNNAGLYGSRAVAFGETDYED
                     WSDVFRVNTQAPLKMAECFVEQVANSDKKLIVSISSRLGSIGENDEGQQYTYRSTKAA
                     LNAINKSMSVDLVGRGITTVVLHPGWAQTDMGGPNAAVDPVDSVAGMRSVIDNLTTAD
                     TGRNISYDGSSIDW"
     gene            540..698
                     /locus_tag="QF359_09560"
     CDS             540..698
                     /locus_tag="QF359_09560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87196.1"
                     /translation="MADPIEFLFDSFSPYAYVATHRIEELGDKHDREVIWRSFLLGAM
                     FQVNGHDH"
     gene            695..1141
                     /locus_tag="QF359_09565"
     CDS             695..1141
                     /locus_tag="QF359_09565"
                     /inference="COORDINATES: protein motif:HMM:NF013488.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HJO87197.1"
                     /translation="MKEQALKWDYSSYNLARIDRLYDVQWTLPEKFSIATETAGRVFY
                     WIDDQDIELAKKFALAAYQEYFAKGIDIRSKEVIAGMAAELRFAKTDSLAAMGDENYK
                     QKLKDVTADAIKRNVCSSPFFFIGSELFWGSDRLEMMDLWLKKGCY"
BASE COUNT          321 a          236 c          304 g          312 t
ORIGIN      
        1 gatgtaacag ataatctgac aatcgaaacc gtttcccgaa tattacgtgc cgagaagatc
       61 gatctattgc taaacaatgc tgggctttac ggttcacgtg cagtcgcctt cggtgaaacc
      121 gattatgagg attggtctga cgtttttcga gtcaataccc aggcaccgct taaaatggct
      181 gaatgttttg ttgaacaggt ggcaaattca gataagaaac tcatcgtctc gatttccagc
      241 cgtcttggca gtattggtga aaacgatgag ggccagcaat atacttaccg gtcaaccaaa
      301 gcggcgctca acgccataaa taagtcaatg tcagttgact tagtagggcg gggcataacg
      361 actgtggtgc tgcatccggg ctgggcacaa acggatatgg gtggtcccaa tgcggccgtc
      421 gacccggttg atagtgtcgc aggtatgcgc tctgtcattg acaatttaac gactgccgat
      481 accggcagaa atattagcta tgacggttca tcgattgatt ggtaggagaa ttctggaaaa
      541 tggctgatcc aattgagttt ctatttgatt ccttctcacc ctacgcttac gttgcgaccc
      601 atcgcatcga agaacttggg gataagcatg acagagaggt gatctggcgg tcgtttttat
      661 taggtgcgat gtttcaggtg aacggccacg accactgaag gagcaagccc taaaatggga
      721 ctattcaagc tataatctag cgcggataga ccggctttac gatgtccaat ggacgctgcc
      781 ggaaaaattt tcgatcgcca ccgagacggc cgggcgagtt ttttactgga ttgatgatca
      841 agatattgag ctcgcgaaga aatttgcact ggccgcttat caggaatatt ttgccaaagg
      901 tattgatatc cggtcgaagg aagttatcgc cggtatggcg gctgaattga gatttgctaa
      961 aactgatagt ttggccgcta tgggggacga aaactacaaa caaaagctca aagacgttac
     1021 cgcagacgcg attaagcgga atgtttgtag ctcaccattt ttctttattg gcagcgagct
     1081 gttctggggc agtgaccgtc ttgagatgat ggatttatgg cttaaaaaag gctgttatta
     1141 aattaatata taaggttaga taaatattat aac
//
LOCUS       DASCNL010000721         2588 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001467871, whole genome shotgun sequence.
ACCESSION   DASCNL010000721 DASCNL010000000
VERSION     DASCNL010000721.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2588)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2588)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2588
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001467871"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="QF359_09570"
     CDS             <1..611
                     /locus_tag="QF359_09570"
                     /inference="COORDINATES: protein motif:HMM:NF013381.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HJO87198.1"
                     /translation="QAPYDMFVDFFRGSKSGMLDMFRNKDKMLAATAKARDFMLENAI
                     KEAREANCPYVLIPLHWGLDGFMSLDQFKVFYWPDLRKMIIELINNELTPVIKWEGDC
                     TSRLETIGDIPAGKAVYWFELTDLVTAKEMIGDTVCLRGNVPASILNTATPDDVDEYC
                     KNIINKVGKGGGLILDGAIGVPDEARIENVVAMAQSVKKNAF"
     gene            644..1474
                     /locus_tag="QF359_09575"
     CDS             644..1474
                     /locus_tag="QF359_09575"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HJO87199.1"
                     /translation="MSIEQTRIYPINTGWIKVDHGTYLFWKGNAGNDTAIPVICYLVD
                     TRDHKIMVDTGLPDEARATRWHHDCNKRGCLDSPDAVRHLGFDPAAIDICLFTHLHWD
                     HTHNMKDFTNARYICTAEELRWAHNPLPLYYRSYESPKLGIEAPFTGCDFEVVEGEAE
                     IVPGVSVFPTPGHTPGHQCVSVETSAGKIVIAGDAIFLYENLEPNLDEQWRHWVPARF
                     VNVIDGWQSIEEIDKRADYVLPTHDERVLEHDVFPFGGMPLRDKHRQVSGASFYFGGD
                     "
     gene            1482..>2588
                     /locus_tag="QF359_09580"
     CDS             1482..>2588
                     /locus_tag="QF359_09580"
                     /inference="COORDINATES: protein motif:HMM:NF002674.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tm-1-like ATP-binding domain-containing protein"
                     /protein_id="HJO87200.1"
                     /translation="MVQSPTVVVVATLDTKGVDAAFVRDLILEKGLATLLVDVGVLGD
                     ITVTPDIGREEIAEYAGTTLAELIDTKDKGLTITTQSAGLVALVQDLYDQGRLTGIIG
                     LGGGQGTAIISPALRALPIGVPKLMVSTVANGKHQFGSYVGSRDICMMYSVADIQGLN
                     RLSRPILENAANAITGMAVHQRPVPDSERPAVAVTMMGVTTPGVQKALARFDTKGFDG
                     VPFHAVGSGRTMEDLAGEGMFAGILDYSTHEIIDDLFDGVGGAPERLSVLSRTAIPTV
                     ISVGACDYMIYRSADHIPTAFQGRPTLFYNPQMTFVRPAPAEMTKVAKTIAERLNQAL
                     GPTLMLIPKRGFSAPNIDGGPLWGAEGNQAMIDGL"
BASE COUNT          605 a          672 c          721 g          590 t
ORIGIN      
        1 ctcaagctcc ttatgacatg ttcgttgatt tttttcgtgg ctctaagagc ggcatgctcg
       61 atatgttccg taataaggat aaaatgctgg ctgcaaccgc caaggcccga gactttatgc
      121 tcgaaaacgc tatcaaggag gcgcgggaag ccaattgccc ttacgtacta attccactgc
      181 attggggatt ggatggcttt atgtcgctcg atcagttcaa agtattttac tggcccgacc
      241 tcagaaaaat gatcatcgaa ctgatcaaca atgaattgac cccagtgatt aagtgggaag
      301 gtgattgcac ctcacggttg gaaacaatcg gcgatatccc agccggtaaa gccgtttact
      361 ggttcgaact tactgatttg gtaaccgcca aagagatgat aggcgatacg gtctgcctgc
      421 gtggcaatgt accagcgtcg atcctcaata cagcgacgcc agatgatgtc gatgaatatt
      481 gtaagaacat tattaacaaa gtgggcaagg gcggcggcct gatcctcgac ggtgccatag
      541 gcgtacctga cgaggccagg atcgaaaacg ttgtcgccat ggctcagtcg gttaagaaaa
      601 acgcgttctg aattaccggt gaggaatgag aaaaatatag taaatgagca ttgaacaaac
      661 ccgcatttat ccaatcaaca ccggctggat caaagtcgac cacgggacct atctgttctg
      721 gaagggtaac gccggcaacg atacagccat tccggtaatt tgttatctgg tcgatacgag
      781 agaccacaag atcatggtcg ataccggctt gcccgatgaa gcgcgcgcga ccaggtggca
      841 tcacgattgc aacaaacgag gctgcctaga tagtcccgat gcggtgcggc atttgggatt
      901 tgatcctgcc gctattgata tctgcctgtt tacccatctg cactgggatc acactcacaa
      961 catgaaggat ttcaccaatg cccgctatat ctgcacggcg gaggaactgc gctgggccca
     1021 taatccgttg ccgctttatt accggtctta tgaatcaccg aagcttggta ttgaagcgcc
     1081 cttcaccggt tgcgactttg aggtcgttga aggggaagct gaaattgtcc ccggcgtcag
     1141 cgtttttccg acgccaggcc ataccccggg ccaccaatgc gtcagtgtcg agactagcgc
     1201 cggtaagatc gtcatcgctg gcgatgcgat tttcctctat gagaatttgg aacctaacct
     1261 cgacgaacaa tggcgccatt gggtgccggc ccggttcgtc aatgtgatcg atggctggca
     1321 aagtatcgaa gagatcgata aacgagctga ctacgttttg ccgacccacg acgaacgcgt
     1381 ccttgaacat gatgtttttc cttttggggg aatgccactg cgtgacaagc atcggcaggt
     1441 gagtggtgcc tcattttatt ttggcggcga ctgaataggt catggtgcaa tctccgacag
     1501 tggtggtggt ggcaaccctc gataccaagg gggtagatgc tgcgttcgtc cgcgatctca
     1561 tcctggaaaa agggctggcg accctgctcg tcgatgtcgg cgtccttggg gatataacgg
     1621 tcaccccgga tatcggccgg gaggagatcg ctgaatacgc tggcaccaca cttgcggagc
     1681 tgatcgatac caaagataag ggattgacaa tcaccaccca atcagcggga ctggtggcgt
     1741 tggtccaaga cctctatgac caggggcggc tcaccggtat tatcggcttg ggcggcggcc
     1801 aaggcaccgc gatcatcagt ccggccttgc gtgctttgcc gattggtgtg ccgaaactga
     1861 tggttagtac agtggccaac ggcaagcacc aattcggatc atatgttggc tcgcgcgaca
     1921 tttgcatgat gtattcagtg gccgatatcc aaggccttaa tcggctcagc cggccaatcc
     1981 tggaaaacgc cgccaacgca attaccggta tggcggtgca tcaacggccg gtacctgaca
     2041 gtgagcgtcc agcggtcgcc gtcaccatga tgggcgttac cacgcccggt gtgcagaaag
     2101 cccttgcccg cttcgatact aaaggatttg acggcgtgcc gtttcatgcc gtaggcagcg
     2161 gtcggacgat ggaggatctg gccggtgagg gcatgtttgc tggaatattg gattacagca
     2221 ctcatgagat tatcgacgat ctgtttgatg gcgtcggtgg ggcgcccgaa cggctcagcg
     2281 tattgtcccg aacagccatc ccgacagtga tttcagtggg agcttgtgac tatatgatct
     2341 accgctccgc cgatcacatc ccaaccgctt tccagggacg tccaaccctg ttctacaatc
     2401 cgcagatgac ctttgtccgg ccggcaccgg ctgaaatgac caaagtcgcc aaaacgattg
     2461 ccgaacgtct caaccaggcc cttggtccga ccttgatgtt gatccctaag cgcggctttt
     2521 cggcgcccaa cattgacggt ggcccgctct ggggagcaga gggcaaccaa gcgatgatcg
     2581 acgggttg
//
LOCUS       DASCNL010000722         3979 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001470545, whole genome shotgun sequence.
ACCESSION   DASCNL010000722 DASCNL010000000
VERSION     DASCNL010000722.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001470545"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..124
                     /locus_tag="QF359_09585"
     CDS             <1..124
                     /locus_tag="QF359_09585"
                     /inference="COORDINATES: protein motif:HMM:NF013923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJO87201.1"
                     /translation="NPTEEEVRDMLSGHLCRCTGYAGIVNAIMATAKQRQENKS"
     gene            complement(155..1567)
                     /locus_tag="QF359_09590"
     CDS             complement(155..1567)
                     /locus_tag="QF359_09590"
                     /inference="COORDINATES: protein motif:HMM:NF013584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HJO87202.1"
                     /translation="MGEHILDRPIRGIASAVRKGKTSFEEVMGEAVARHERHDDILQA
                     FKHFNGKGAIEAARLADALLAKGHDVGPLMGLPISAKDIFGVTGMPTFGGTNREMDPE
                     WEVDGPVMQALRRYMAIPTGKTHTIEFAFGAVGTSYHYGAPRNPWDAKEHRVSGGSSV
                     GAGVSLTEGSSLLALGTDTGGSIRIPASVTGNVGLKVTIGRWSTDGIVPLSTTFDTPG
                     YLTRSVEDAIIGFGAVDPDYDDSEALFNDLDGIDAGDLRLGICDEHFWDNCAPGVAEG
                     VQGAIDELAKKGAHLIKIPMAEATEARKCLYDAFMFGVEGLSHVRQFFEDRMDSVDPT
                     IERRLKAGIDITGVDYYTSVRTLERLNGVVCDRLRHVDALVVPTVPHTPPTVQEVEDI
                     DDYFAANGLMTQNTQPINMLALCGVTIPVALDKAGMPVGLQLVGASGTEERVLSTALA
                     CERHFGTARERFGVPPLLAG"
     gene            1883..2998
                     /locus_tag="QF359_09595"
     CDS             1883..2998
                     /locus_tag="QF359_09595"
                     /inference="COORDINATES: protein motif:HMM:NF012335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HJO87203.1"
                     /translation="MTEKAYAAVLTTERQFDYRDVDIPDIGPDEGLLRMEAAGLCGTD
                     YEQFEGHFTGTVYGTLPMTPGHEILGWIDRLGANAAKRWSVKEGDRVIVETSIPCGDC
                     IPCQDDRPIYCDENMGYGIRLGFDRIPHLWGGYASHLYLHPKSRLHKVPNDIPTDAMS
                     LFNPLSNAVRWVAAKPNLKAGQSIVIEGPGQRGLLSVIVARELGAENIIVTGTSTDEN
                     RLKVARQFGATATINVEKEDPVERVIELTDGRKVDVVLDVSAGSTEPILQGIEMIRKG
                     GTFVVAGVKTHNALNDFYTDKLIFNEISMLGVLSSDWTDTAKAVEILKEHWQELKVLC
                     THSYPIGEAEKAVRVLGREIDDGGDPVHIYLDTTIAP"
     gene            3016..>3979
                     /locus_tag="QF359_09600"
     CDS             3016..>3979
                     /locus_tag="QF359_09600"
                     /inference="COORDINATES: protein motif:HMM:NF020650.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87204.1"
                     /translation="MTKTLPIRMAAGSGPTFGVDDLACAAATHLGCWKEEGLDVTWTP
                     VHGGVAAMQSVLNGETDVSYGGLGPVLKFRAESQPVRIIVSMARSLAQNLFVQPNITS
                     PEELRGKSWAIDGFGALSHHMARLVVRALKIGEEEIDWQAVGPPPERIANLLAGTIDV
                     SLIRVEEATSLDSDTSNDLHTLLGFAELKELVPVQPHGVLATTETYEQAHPEELHRLT
                     RGMIRASRALNDDFENFRKVYDHNVTVKVDDEKIHDIWQKETDSGGFAVNGELTNGHW
                     KNQMELFYELNSELPEISRDDVIAENFVMRALEDLGIQPAQDEPG"
BASE COUNT         1006 a         1063 c         1016 g          894 t
ORIGIN      
        1 caaccccacg gaagaagaag tccgtgatat gttgagcggc catctctgcc gctgcaccgg
       61 ctatgcgggg atcgtcaacg ccatcatggc aaccgccaag cagcgccagg aaaataaatc
      121 ctaaaaaagt gctgctgaat agcgctctct atttctaccc agccagcaga ggcggaacac
      181 cgaaacgttc gcgggcagta ccaaaatgac gctcacaagc aagtgcggtc gacaacaccc
      241 gttcttcggt tccggatgca ccgaccaact gcaagcccac tggcatcccc gccttatcca
      301 acgccaccgg aatggtaacg ccgcagagcg ccagcatatt aatcggctgg gtattttggg
      361 tcatcaaacc attggcggca aaatagtcat cgatgtcctc aacctcttgc acggtcggtg
      421 gcgtatgcgg tacggtcggc accaccagcg cgtcgacatg gcgcaagcga tcacaaacaa
      481 cgccgttcaa ccgctccaat gtgcggacgc tggtatagta atcaacaccg gtaatatcga
      541 tgccggcttt aagccgccgc tcgatggtcg gatcgacgga atccatacgg tcttcaaaaa
      601 actggcgcac atgagacagt ccttcaacgc caaacataaa ggcatcatac aaacatttgc
      661 gcgcctcggt cgcttcagcc atcggaattt taattaaatg tgcgcctttc ttggccaatt
      721 catcaatcgc cccttgcact ccttcggcaa cgccgggggc gcagttgtcc caaaaatgct
      781 cgtcacaaat gccgagacgt aaatcaccgg catcgatacc gtcgagatcg ttgaacagcg
      841 cttccgaatc atcataatcc ggatcaacag caccgaagcc aataatcgcg tcttcaaccg
      901 agcgtgtcag ataaccgggc gtatcaaaag tcgtgctgag cggcacgata ccatcggtcg
      961 accaccgtcc aatagtaact ttgaggccga cattgccggt gacgctagcg gggatacgga
     1021 tcgagccacc ggtatcggta ccgagcgcca ataaagatga accctcagtc aggctgaccc
     1081 cggcaccgac gctggagccg ccactgaccc tatgttcctt ggcatcccat ggattgcgcg
     1141 gtgcgccata atgataactc gtaccgacgg caccaaaggc gaattcgatg gtgtgggttt
     1201 tacctgtcgg gattgccata tagcggcgca gcgcttgcat caccgggcca tcgacctccc
     1261 attccggatc catttcccgg ttcgtgccgc caaaggtcgg cataccagta acgccgaaga
     1321 tgtccttggc cgaaatcggc agccccatca gcggtccgac atcatgcccc ttagcgagca
     1381 aggcgtcagc caggcgtgct gcttcaatgg cacccttgcc attaaaatgc ttaaaagctt
     1441 gcaaaatatc atcatgacgt tcgtggcgcg ccacggcttc acccatcact tcttcaaagc
     1501 tggtttttcc tttccggacc gctgaagcga ttcccctgat tggccggtct aaaatatgtt
     1561 ctcccacgat gctcgttcct tattttaata aaaaaattaa cggtaaaatc agtggcgttt
     1621 cacagccaat atgagcccaa aatataccta aaaaatttac ctttggaaag catataaaaa
     1681 tccaaaatac cgcagaatac taggaattaa agcaccttaa ggcggaactg aaaaatcttt
     1741 ccaaggaggt aatctctatt gttatttgtt gttagtactt tattctttcc gtattgtcac
     1801 tgaggctcaa tacgtcgcct attttttgct ccctcgtcat cggcattggc ggctttttga
     1861 agtaataata tggatttaga taatgactga aaaagcctac gccgccgttc ttaccacaga
     1921 acggcaattc gattaccgtg atgtcgatat tcctgatatc ggaccggatg aaggtttgct
     1981 ccgtatggaa gcggcgggtc tgtgcggtac tgattacgaa caattcgaag gacatttcac
     2041 cggcactgtc tatggcaccc tgccgatgac gccgggtcac gagatattgg gttggataga
     2101 ccggctcggc gccaatgctg ccaagcgctg gagcgtcaag gaaggcgacc gcgtaatcgt
     2161 cgaaacctca atcccgtgcg gtgactgtat accctgccag gatgaccgcc cgatttattg
     2221 tgatgaaaat atgggctatg gcattcgctt gggctttgat cgaattcccc acctgtgggg
     2281 cggctatgcg tcacatcttt atctccatcc taaatcccgg ctacataaag tgccgaacga
     2341 cattccaacc gatgctatga gcctgtttaa cccgctctcg aatgcggtcc gctgggtggc
     2401 ggcaaaaccc aaccttaaag ccggccagtc catcgtcatc gagggtccag ggcaacgcgg
     2461 cttgctgagc gttatcgtcg cccgcgaatt aggcgccgaa aatataatcg ttaccggcac
     2521 cagcaccgac gaaaacagat tgaaggtggc gcgccaattc ggcgccaccg ccaccatcaa
     2581 tgtcgagaaa gaggacccgg tagaacgggt tattgaactg accgatggcc gcaaagtcga
     2641 tgtggtgctg gacgtatcgg cgggctcgac ggaacctatt ttgcaaggca tagaaatgat
     2701 cagaaaaggc ggcacctttg tcgtcgccgg ggttaaaacc cacaacgcgt taaacgattt
     2761 ctatactgat aaattaattt tcaatgaaat ctcaatgctt ggtgtgctct cctccgattg
     2821 gacggatacc gccaaggccg tggaaattct gaaagaacat tggcaggaac ttaaagtcct
     2881 ctgcacccac tcatatccca tcggtgaggc tgaaaaggca gtgcgggtgc tgggccgaga
     2941 aattgatgac ggcggggacc cggttcacat ttatctggat acgaccatag caccgtaaaa
     3001 atactggaag agttcatgac aaaaactttg ccaatccgca tggcggcggg atcgggaccg
     3061 accttcgggg ttgatgattt ggcctgcgcc gccgccaccc atcttgggtg ctggaaagaa
     3121 gaaggacttg atgttacctg gacgccggta catggcggtg ttgctgccat gcagtcggtg
     3181 ctcaacggtg aaacagatgt gtcttatggc gggctcggtc cagtattgaa gtttcgcgct
     3241 gagagccagc cggttcgtat cattgtttcg atggcgcggt ccttggcaca aaatctattc
     3301 gtacaaccta acatcaccag cccggaagaa cttcgcggca agtcgtgggc aatcgatgga
     3361 tttggtgcac ttagccacca catggcgagg ttggtagtcc gggctttgaa aatcggtgag
     3421 gaagaaatcg attggcaggc cgttgggccg ccaccggaac ggattgctaa tctgctcgcc
     3481 ggcaccatcg atgtttccct aatccgtgtc gaagaagcga cttccttgga tagcgataca
     3541 agtaacgatc tccatacttt acttggtttc gctgaattaa aggaacttgt tccagttcaa
     3601 ccccacggcg tcttggcgac aacggaaact tacgagcagg cgcatccgga ggaactgcac
     3661 cgtctgaccc ggggaatgat ccgggcctcg cgggccctaa acgatgattt cgaaaatttt
     3721 cgcaaagtct acgatcacaa tgtcacggtc aaagttgatg atgagaaaat ccacgatatt
     3781 tggcagaaag aaacggattc cgggggcttc gcggttaatg gagagctcac caacggtcat
     3841 tggaaaaatc agatggaact attctatgag ttaaattccg aacttccgga gatatcccgt
     3901 gacgacgtga ttgctgaaaa ctttgttatg cgcgcgctgg aagatttggg tattcagccg
     3961 gctcaagatg agcccggtt
//
LOCUS       DASCNL010000723         4873 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001470734, whole genome shotgun sequence.
ACCESSION   DASCNL010000723 DASCNL010000000
VERSION     DASCNL010000723.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4873)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4873)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4873
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001470734"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="QF359_09605"
     CDS             <1..202
                     /locus_tag="QF359_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87205.1"
                     /translation="IISVTLPRYMSNASTIGISMLAEITLLARWIGAESVLAIKYSTE
                     IGLPIPPKLKETKKEKPKETPK"
     gene            203..373
                     /locus_tag="QF359_09610"
     CDS             203..373
                     /locus_tag="QF359_09610"
                     /inference="COORDINATES: protein motif:HMM:NF019511.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HJO87206.1"
                     /translation="MPKEIGGPKGSEPTRYGDWEKTVDVLIFNIERGHLPGTSYQAVR
                     RSPKVSPLAVLK"
     gene            complement(647..2584)
                     /gene="acs"
                     /locus_tag="QF359_09615"
     CDS             complement(647..2584)
                     /gene="acs"
                     /locus_tag="QF359_09615"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HJO87207.1"
                     /translation="MSEDLIFPVPDQVAADAWVDNDKYLEMYQASVDDSESFWSEQGK
                     RIDWIKPYTQVKDVDFADNARIKWFYDGTLNASFNCLDRHLDTRGDQTAIIWEGDDPE
                     DSKTITYNELHKQVCRLANAMKNEGIQKGDVITIYMPMIPEAAVAMLACTRIGAIHSV
                     VFGGFSPDALAGRIQDCDSNCVVTADEGVRGGKAIPLKANTDAAVAKCSTVKKVFVVK
                     RTGGDIDWDDSRDIWYHEATSAADAACEPEEMGAEDPLFILYTSGSTGKPKGVMHTTG
                     GYMVYVSMTHQYVFDYKDGDIYWCAADVGWVTGHSYILYGPLANGAITTMYEGLPNWP
                     DASRIWRVVDKHNVNILYTAPTAIRALMREGEEPVKKTNRKSLRLLGTVGEPINPEAW
                     MWYYKVAGDERCPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVKPALVDPDG
                     TILEGANSGNLVLLDSWPGQMRTVYKDHPRFIETYFSTYPGRYFTGDGCRRDEDGYYW
                     ITGRVDDVINVSGHRMGTAEVESALVAHPKVSESAVVGYPHDIKGQGIYAYVTLMEGI
                     NPSEILRQELSDWVRKEIGPIAKPDLLQWAPGLPKTRSGKIMRRILRKIAENDPSNLG
                     DISTLADPSVVENLVNERMNT"
     gene            complement(2850..3023)
                     /locus_tag="QF359_09620"
     CDS             complement(2850..3023)
                     /locus_tag="QF359_09620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87208.1"
                     /translation="MMTKKGTEKMLIVIRRNNNAFVYINSCPHIVEPLDLQPGKFLSH
                     DKKYHLLNPRYAV"
     gene            complement(3013..3528)
                     /locus_tag="QF359_09625"
     CDS             complement(3013..3528)
                     /locus_tag="QF359_09625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87209.1"
                     /translation="MFKTLKSGLANHFKGRAMNSSRKAVQDYIIGLRQMTDQDLGVIL
                     AVSTVIRINMENQEYLPKGLYSDQSLLSTTELGRYQMDLNKLVRDFNKMKQHTDAVGT
                     LLISYSLRCLNVPEVRDLGREMWAEMQRGYPHVKDALKQGEEEKGESFPERAWQEWQQ
                     IPVGLEPLDDD"
     gene            complement(3538..3825)
                     /locus_tag="QF359_09630"
     CDS             complement(3538..3825)
                     /locus_tag="QF359_09630"
                     /inference="COORDINATES: protein motif:HMM:NF015735.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HJO87210.1"
                     /translation="MLFHIRCKDKPSQMNMRASTRAVHLKYLANFGDSIFFAGPTYTD
                     EGETVTGSVFLIDLEDMAAAENFAKGDPYRKVGLFESVEIEQIRKVIPTDD"
     gene            complement(3866..4858)
                     /locus_tag="QF359_09635"
     CDS             complement(3866..4858)
                     /locus_tag="QF359_09635"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HJO87211.1"
                     /translation="MSKIGIIGAGAWGTALAMAAIRAGNEVVIQAHEPEVAEAINLHH
                     ENSIFLPSYELDLGIKATSVMVDAVDADVVLLVAPAQHMRGVCDAAAADWPSGVPAII
                     CAKGIEQGSCALMSEVVGEMLPGKPIAVLSGPTFAAEVARDLPTAVTLACDDETMAKV
                     LMETLSTRYFRIYRSRDVIGSQIGGAVKNVLAIACGIVEGRKLGDNTRAALVTRGLAE
                     ISRLGIAKGAHAETLAGLSGMGDLTLTCNAVQSRNFSLGVALGSGQRLEDILSERNSV
                     AEGVFTASSVTDLARRLNVDLPICSAVDGVLNHGANIDATINGLLARPLKAETT"
BASE COUNT         1247 a         1267 c         1153 g         1206 t
ORIGIN      
        1 gattatttcg gtaactttgc cacggtatat gagtaacgcc agcaccatag ggatcagcat
       61 gctggcagaa attacattat tggcgcgctg gattggcgcc gagtcagtac tggccataaa
      121 atatagtacc gagataggac taccaatacc gccaaagcta aaagaaacaa aaaaggaaaa
      181 acctaaagaa acgccaaaat agttgccgaa agaaattggt ggccccaaag gctccgaacc
      241 cacccgctac ggcgattggg aaaaaacggt agatgttctg atttttaata tagaaagggg
      301 gcatcttcct ggtacatcct atcaagctgt acgccgatcc cctaaggtgt ccccgcttgc
      361 ggtgttgaag tgatttcatt caacacgaag accaccaaga ccatgaagaa tttaatagtg
      421 catccccacc acgtcaccac ggtcatcaaa taacaaatgt cgccatacgt ggacttgacc
      481 tgcctccgcc gaagttacgc gcaggcaggt ccgcgtatcc atcgtcaaga agtccattca
      541 ccacagaaaa cttataaaag ccccaatcct aaaccttaaa aaaggggaca cgtaacccac
      601 taattgtctt tggcatgtcc cctttttcta aattacttca cccgcattac gtattcatgc
      661 gctcattgac caggttctcg acgacgctgg ggtcagcgag ggtcgagatg tcgcccaaat
      721 tcgacggatc gttctcggca attttacgca atatacgacg catgattttc cccgaccggg
      781 ttttcggcag acccggagcc cattgcagca gatctggttt ggcaatcggg ccaatttcct
      841 tgcgcaccca atcgctgagc tcctggcgta gaatttctga tggattgatg ccttccatca
      901 gcgtgacata ggcataaatg ccctgacctt taatgtcatg cggatagccg acaacagcgg
      961 attccgatac tttcggatgg gcaaccagcg cgctttccac ttcagccgtg cccatgcggt
     1021 ggccagagac attgatcaca tcatcgaccc ggccggtaat ccagtaatag ccgtcttcgt
     1081 cacggcgaca gccatcaccg gtgaaatagc gtccgggata ggtcgagaaa taggtttcaa
     1141 taaagcgagg atgatctttg taaaccgtcc gcatttggcc gggccagcta tcgagcaaca
     1201 cgagattgcc ggaattggcg ccttccaaaa tagtgccgtc gggatcgacc aaagctggct
     1261 tcaccccaaa aaacggtctc gtggccgagc ccggtttcaa ggccgtcgca cccggcagag
     1321 gcgtgatcaa aataccaccg gtttcagttt gccaccaggt atctacgatc gggcaacgtt
     1381 catcgccagc gactttataa taccacatcc aggcttctgg gttgatcggc tcgccaaccg
     1441 tgcccaatag ccgcaaagat ttacggttgg tttttttgac cggctcctcg ccttcccgca
     1501 tcaaggcgcg gatcgccgtc ggtgcggtgt aaaggatatt gacgttgtgt ttatcgacga
     1561 cccgccaaat acgtgacgcg tccggccagt tgggcaggcc ttcatacatc gttgtgattg
     1621 cgccattggc gagcggccca tacagaatat agctgtggcc agtaacccag ccgacatcag
     1681 ccgcacacca atagatatcg ccatctttat aatcaaaaac atattgatgg gtcatcgaga
     1741 cataaaccat atagccgccg gtggtgtgca tgacgccttt aggtttgcca gtcgagcctg
     1801 acgtataaag tatgaataac gggtcttcgg cgcccatttc ttcaggttcg caagccgcat
     1861 cagccgccga ggtggcttca tgataccaga tgtcccggct gtcatcccaa tcaatgtcac
     1921 cgccggtgcg cttaacgaca aagacctttt tgaccgttga gcatttagcg actgccgcat
     1981 ccgtattggc tttgagaggg atcgctttac caccgcgcac accttcatca gcagtgacga
     2041 cacaattgga atcacaatcc tggatacggc cggccaaggc atccggtgaa aaaccaccaa
     2101 ataccactga gtgaatggcg ccaatccgtg tacaggccag catggcgaca gcggcttcag
     2161 ggatcatcgg catatagatc gtgatgacat cgcctttttg gatgccttca tttttcattg
     2221 cattggcgag gcgacagact tgtttgtgaa gctcattata ggtgattgtc ttcgaatctt
     2281 ccgggtcatc accttcccaa ataatggcgg tttgatcacc ccttgtatcg agatggcgat
     2341 caaggcagtt aaatgacgcg tttagcgtgc catcgtaaaa ccacttaatc cgggcattat
     2401 cggcaaagtc gacgtcttta acttgggtgt agggtttgat ccaatcgatc cgtttgccct
     2461 gttcactcca aaaactttcc gagtcatcaa cggacgcctg gtacatttcc aaatatttat
     2521 cattatctac ccaggcatca gcagcgacct gatcgggcac gggaaatatt aaatcttctg
     2581 acatgttagg cctttgaacc tccctataga acgtaacggt ccttatacgc agccaactcc
     2641 tgaatgcggt cgcgatgatc tgttgatctt acaaatgttt tatcctgatc tgttgactaa
     2701 aaacaagtgc cgaaaacaaa gattaaataa aaatattagg ggaactaatt tagccagtat
     2761 acaagacttc gccgttttca acctaaatcg gaaaaacgtc aagatgattg tctttgcagg
     2821 ggccaaaaac acaatggcca gtataaattt caaacagcgt accgtgggtt gagcaaatga
     2881 tattttttat catggctgag gaatttaccc ggctgtaaat caagcggctc tacgatatga
     2941 ggacaggaat taatgtagac aaaagcatta ttgttgcgac ggataacaat cagcattttt
     3001 tccgtgcctt ttttagtcat catctaacgg ttctaatcca actggaattt gctgccattc
     3061 ctgccaggca cgttccggaa aagattcgcc tttttcctcc tcaccttgtt tgagcgcatc
     3121 tttaacatgc ggatacccgc gttgcatttc cgcccacatt tcgcggccaa gatcacgcac
     3181 ttccggtacg ttcaggcagc gcaaactata ggagattagc agcgtgccaa ctgcgtcggt
     3241 gtgttgtttc attttgttga aatcccgcac cagtttgttg aggtccatct gatagcgccc
     3301 tagctcagtg gtggagagca gagattgatc ggaatagagt ccttttggca gatattcttg
     3361 gttttccata ttgatgcgaa taaccgtgga gaccgcgaga ataacgccaa gatcttgatc
     3421 tgtcatttgg cggaggccga tgatatagtc ttgcaccgct ttgcgactcg aattcatcgc
     3481 ccgacctttg aaatgattgg cgagacctga tttcagcgtt ttaaacatcg actttggtta
     3541 atcgtcggtt ggaataactt tgcggatttg ttcaatctca accgattcaa ataggccgac
     3601 tttgcgataa ggatcgcctt tggcaaaatt ctctgccgcc gccatatctt cgagatcaat
     3661 gagaaataca ctgccggtaa ccgtttcgcc ttcatctgta taagtcgggc cggcaaaaaa
     3721 tatactgtcg ccaaaattag cgagatattt cagatgaact gcacgcgtag aggcgcgcat
     3781 attcatttgg ctgggtttat ctttacaacg aatgtgaaac agcattgtct ttgcctcttt
     3841 ctggccttct aaagtactga attaattaag tggtttcagc ttttagcgga cgcgccaaaa
     3901 gaccgttgat ggtcgcgtcg atattagcgc cgtgatttag cacgccatca acagcagagc
     3961 aaatcggcag atcaacatta agccggcggg caagatcggt aaccgatgag gcagtaaaaa
     4021 caccttcggc aactgaattt cgttcgctta agatgtcttc gaggcgttga ccactgccaa
     4081 gggcaactcc cagtgaaaaa ttgcgtgatt gaacggcgtt gcaagtcagc gtcaaatctc
     4141 ccatccccga caggcccgcg agggtttccg catgggcgcc tttagctatg cctaagcggc
     4201 taatttcggc gagaccgcgg gtgaccagtg cggcccgtgt attgtctcca agtttgcggc
     4261 cttcaacgat gccgcaggct atggccagca cgtttttgac cgcaccacca atttgcgagc
     4321 cgataacatc ccgcgagcgg tatattctaa aataccgggt gctcaaggtt tccattagaa
     4381 ctttagccat ggtttcatca tcgcacgcca aggttacggc cgttggcaga tcacgcgcta
     4441 cttcagcagc aaaagtgggg ccagataaga cagcgatggg tttgcccggc aacatttcgc
     4501 ccaccacttc gctcattaag gcacagctgc cttgctcgat tcccttggcg caaataattg
     4561 ccggcacgcc acttggccaa tcagccgccg ccgcgtcaca aacgccacgc atatgttgag
     4621 cgggagcaac cagcaataca acatccgcat caacagcgtc caccataacg ctggtagctt
     4681 ttatgcccag atcaagctcg taacttggta gaaaaatact gttttcgtga tggaggttga
     4741 tggcttccgc aacttccggc tcatgggctt ggatgacaac ttcgttgcca gccctgatgg
     4801 cggccattgc cagggcagta ccccaggcgc ccgcgccgat gataccaatc ttactcatga
     4861 attatttatg ccg
//
LOCUS       DASCNL010000724         2739 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001471991, whole genome shotgun sequence.
ACCESSION   DASCNL010000724 DASCNL010000000
VERSION     DASCNL010000724.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001471991"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="QF359_09640"
     CDS             <1..440
                     /locus_tag="QF359_09640"
                     /inference="COORDINATES: protein motif:HMM:NF025627.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HJO87212.1"
                     /translation="VNRQTNEIIWEMADRSWGGQHDSQQLDNGNIILFANGSEQSSPE
                     HSRILEIDPNTKETVWQYKGQPAVTFFSPRVSGVHRMANGNTFICEGFHGRMFEVTQA
                     GKIVWEYISPFYNAVPQIGTTNQIFRARKYSRDDQRLGNIFQN"
     gene            557..2254
                     /locus_tag="QF359_09645"
     CDS             557..2254
                     /locus_tag="QF359_09645"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl sulfatase dimerization domain-containing
                     protein"
                     /protein_id="HJO87213.1"
                     /translation="MSLDTVSASVHPELAQHQEAMEPRVHTLKGHIHSALAYSVVNCT
                     LIEGDDACILVDTMTSMETAELVATEFRKITDKPIKTIIYTHFHADHVSGTHAFVTEE
                     DIASGKVDVIGQEELTDHVMRDVGLIAPILGRRAMYQFGMRLPVGEDGTVGAGLGPPQ
                     RPGKRTFAPPTKTFDDIYRGETGGIKFEIHLIPSETEDQCAVWLPDEKVLMSADAVYC
                     SFPNVYALRGTRFRNPMIWAHGVDRLREFGAEALVPHHGFPVEGASKIDELLTDYRDA
                     IQYVHDQTLRFMNKGYTPDEIKEIVEMPERLKDHPWLGEYYGSYKHSIPAIFAGYLGW
                     YQGDPVTLNPTPWAEKAKRYVELMGGRDKILVLAEEALNNDEVQWAAELLTWLVRMDR
                     QDQEARAMKAEALRRWAYGQKNATWRNWGLTSAKELDGELDLGAGGMVLGSPDQVRGF
                     PLTNIMQVMTVRLISESSSETNIRIAFVATDSNESCALEIHRSVCQFFETPPDERDAT
                     VYFDRAFLLKWIFGQTTFDDAVAAGDITIDGEVATVSNFLAKFEPFNQTEEIAIAAR"
BASE COUNT          736 a          643 c          680 g          680 t
ORIGIN      
        1 tggttaatcg tcagactaat gaaataattt gggaaatggc agatcgaagt tggggaggtc
       61 agcacgatag ccagcaattg gataacggca acataatttt gtttgccaat gggtccgaac
      121 agtctagccc agagcattcc cgcattttag aaattgatcc aaatactaaa gaaacagttt
      181 ggcaatacaa aggacagcct gcagtcactt ttttctcacc tcgcgtcagt ggagtgcacc
      241 gcatggccaa cggcaataca tttatttgtg agggtttcca cgggcgaatg tttgaagtta
      301 cccaagcggg caagattgtt tgggagtata tttcgccttt ctacaatgcc gttccccaga
      361 ttggaacaac caatcaaatt tttagagccc gtaagtattc acgagatgac cagagattgg
      421 gtaatatatt tcaaaattaa ttacgtgcgc ttttgactat ggtctcaatt gatcgacgca
      481 atttaggaag gtgatttaaa ttattcgctt ttcttccaat tcatagaaaa agaaagaccg
      541 caaccaggag aagttcatgt cattagatac agtttcagca tccgttcatc ccgaacttgc
      601 tcagcatcag gaggcgatgg agccacgggt ccataccttg aaaggccata ttcatagtgc
      661 gcttgcttac tctgtagtca attgcaccct gattgaaggc gatgatgcct gtattctggt
      721 ggacaccatg accagtatgg aaacagcgga gctggtagcg accgagttca ggaagattac
      781 cgacaagcct atcaaaacaa ttatctacac tcattttcac gccgaccatg tcagcggcac
      841 ccatgcgttc gtcactgagg aagatattgc ctctggtaag gtagatgtta tcggtcagga
      901 agagttgacc gaccacgtca tgcgggacgt gggtctgatt gcgccgatcc tgggtcgccg
      961 cgcgatgtat cagttcggta tgcgcctgcc agtgggtgag gatggcactg tcggtgctgg
     1021 tctgggacca cctcagagac ccggcaagcg cacctttgcg ccaccaacca agacctttga
     1081 tgacatctac cggggtgaga ccggtggcat taaatttgaa attcacctga tcccgtcaga
     1141 gacagaagat cagtgcgcgg tttggctacc ggacgagaaa gtactgatgt ctgcagacgc
     1201 cgtttattgt tcttttccca atgtctatgc ccttcgaggc acacggtttc gcaatcctat
     1261 gatctgggcc cacggcgttg accggctcag ggaatttgga gccgaagctc ttgtgcctca
     1321 tcacggcttt ccagtggagg gggccagtaa aatcgacgag cttctgactg actaccgcga
     1381 tgccattcaa tatgtgcatg atcagacact ccgttttatg aataagggat atacgccgga
     1441 cgagatcaag gaaattgtcg aaatgccaga acggttgaaa gaccatcctt ggctgggcga
     1501 atattacggt tcctataaac attccatccc ggccatcttt gccgggtacc tcggctggta
     1561 ccagggagat cccgttaccc tcaacccaac cccatgggca gagaaggcca aacgttacgt
     1621 cgaattgatg ggcggccgag ataagatttt agtcctcgcc gaggaagcac taaacaatga
     1681 cgaagttcaa tgggcggcgg aactgctaac ttggctggtt cgaatggatc gtcaagatca
     1741 agaggcccgt gctatgaaag ccgaagccct gcgccgttgg gcatatgggc agaagaacgc
     1801 cacttggcgc aactgggggc taacgtcggc caaagaattg gacggcgaac tggatcttgg
     1861 ggctggcggc atggtgctgg gttcgcccga ccaggtgcga ggctttccac ttacaaacat
     1921 tatgcaggtg atgacggtgc gcctgatatc cgaatcaagc tcggagacaa atattcggat
     1981 cgctttcgtg gctacggaca gtaatgaaag ttgcgcttta gagatccacc gtagcgtctg
     2041 ccagtttttc gaaacaccgc ccgatgaacg ggacgctaca gtctacttcg accgggcatt
     2101 cctactaaaa tggatattcg gccagaccac gttcgatgat gctgttgcag ccggcgatat
     2161 cacgattgac ggcgaagttg ccaccgtctc caacttcctg gctaagttcg aacctttcaa
     2221 ccaaaccgag gagatcgcca tcgcggcgcg ataattcggc caccacgata tgatgttaaa
     2281 cgtgtagcaa accaattttg aagctggcgt ccgttatggg tcaaaagctg ccacaaacgt
     2341 gattgccaaa agtcacatta tccccgtttc attttcagtt aaaaatgacc gaagatcctt
     2401 gatgtcactc attaaaatta ttaccccaac ccatattctc tttttatgtt catatattaa
     2461 agtaaaaaca agaacaataa ttagggcggg tatctattgg aatcaggtca aacgtttgaa
     2521 taccatttat gtctccttct gactattagc cgacatcagg tggcgtcaaa ataacgtttg
     2581 cttaacaccc gaaagcagac attgggtgat aactgatctt aattaagcca gtagttcaaa
     2641 acattagtgg cctcttttta aaaggcggga ggaatttaaa tagctccccg aaccgtagtc
     2701 tttaccgaag atgagaattt tgatctaaaa agtggagat
//
LOCUS       DASCNL010000725         1601 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001472129, whole genome shotgun sequence.
ACCESSION   DASCNL010000725 DASCNL010000000
VERSION     DASCNL010000725.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001472129"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(346..1212)
                     /locus_tag="QF359_09650"
     CDS             complement(346..1212)
                     /locus_tag="QF359_09650"
                     /inference="COORDINATES: protein motif:HMM:NF015901.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HJO87214.1"
                     /translation="MKPGKLNILFLTIAILGLAGAPSLSLAQSLDLATGKSDQPIEIT
                     ADNGIEWQRDKQVMIATGNAKATRGTANVEADTLRAYYQKGQTGASNLSRLDAVGRVR
                     ISSPTQTVTGQSGVYDLEQAVLVVTGKEVTLTSGKNRITATQQMEYYEKKQMAVARQN
                     ATANHDGKMLRANTLVALFAKDKNGKSQVSRVQAFENVRVVTPTESIWASKGIYDVTT
                     GIVTLNGNVRITRDGNQLNGDNAIINLNTGISKLLTDPGAQSPRMEQDNLNNRQLRKK
                     KRVRGLLVPKRK"
     gene            complement(1209..>1601)
                     /gene="lptC"
                     /locus_tag="QF359_09655"
     CDS             complement(1209..>1601)
                     /gene="lptC"
                     /locus_tag="QF359_09655"
                     /inference="COORDINATES: protein motif:HMM:TIGR04409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HJO87215.1"
                     /translation="NQPFSITADLAKNIVLGSSAVELEMPKADIGIKDGTWLVVTAST
                     GLYDQKGKTLELVGGVNLFHDSGYEFNTEKANIDLGKGIATSNVKISGQGPFGNLTAE
                     GFRIENKGNQFIFTGKSKLIIYPNAGKK"
BASE COUNT          361 a          376 c          377 g          487 t
ORIGIN      
        1 gcccagattc tcggccgtca ggccgcgaaa attatccgct attaggcggg gtgggccgtc
       61 attgctggtt agtgtatctg aagactcatt ggcagcgacg gctcgaatat taatcgaagc
      121 cggattatct ggaccaattg aattacttgg tgtgttgtcg tcgctcgcca tgttttacag
      181 tttggttcgt tgttgtaatt tactgccaat tatcgcatct ttattacatg cagtgaatcc
      241 aagcctgaaa caagcaaata ttgcctcaga aggaccaatt taaacctttg gtgcctgaaa
      301 gcaaacagcg tgagaaaatg gagtattttt agacacacac cgttattatt ttcgtttggg
      361 caccaataag ccacgaaccc gcttcttttt acgcagttgc cggttattta agttatcttg
      421 ttccatacga ggtgattgtg caccagggtc agttaacagc ttactaattc cggtatttaa
      481 atttataatc gcgttatcgc cgttgagttg gttaccgtca cgggtgatgc ggacattccc
      541 attcaaggtg acgattccgg tggtgacgtc atagatgcct ttgctcgccc aaattgattc
      601 ggttggcgtg acaacgcgga cgttctcaaa agcctgcacc cggctgactt gcgattttcc
      661 atttttatct ttagcgaata gcgccaccag cgtatttgca cgcaacattt taccatcatg
      721 gttggcagtg gcgttttgcc gcgcgacagc catttgcttt ttttcgtaat attccatttg
      781 ctgggtcgcc gtaatccggt ttttgcctga ggtcagtgtt acttctttac cggtgacaac
      841 gaggaccgct tgttcaagat catatacgcc ggattgtccg gttacggttt gggttggcga
      901 ggaaatccta acccgtccga ctgcatccag gcgcgataaa ttcgatgcgc cagtttggcc
      961 tttttggtaa taagcgcgaa gcgtatcggc ttcgacattt gctgtgccac gggttgcttt
     1021 agcgttaccg gtggcgatca tgacctgttt gtcgcgttgc cattcgatgc cattatcggc
     1081 agtaatttcg attggttgat cagactttcc ggtagcgaga tcaagagatt gcgccaggct
     1141 taatgatggt gcgcccgcca gtcctaagat cgcaattgtg aggaataata tattcagttt
     1201 gccaggcttc attttttccc cgcattcgga taaataatca atttcgattt gccggtaaag
     1261 atgaactggt tgcccttgtt ctcaattcga aatccttctg ccgtcaaatt gccaaacggg
     1321 ccttgaccgg aaatctttac attgctggtt gctatacctt tgccaagatc gatattcgct
     1381 ttctcagtat tgaactcata accggaatca tggaacagat taacgccgcc aactaattcc
     1441 aaggttttcc ccttttggtc ataaaggccg gtactggccg tcaccaccag ccaagtgccg
     1501 tctttgatgc cgatatccgc ttttggcatt tctagttcaa ctgccgaact gccaagcact
     1561 atgtttttgg ctaaatccgc agtaatcgag aacggctggt t
//
LOCUS       DASCNL010000726         1626 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001474935, whole genome shotgun sequence.
ACCESSION   DASCNL010000726 DASCNL010000000
VERSION     DASCNL010000726.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001474935"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(200..1450)
                     /locus_tag="QF359_09660"
     CDS             complement(200..1450)
                     /locus_tag="QF359_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HJO87216.1"
                     /translation="MSIFSIGAILVGLSALFGYINHRFLHLPHTIGLVVIALAASLSI
                     IGFDLIQPSFHIGKQITGVLHQIDFNETLMHGMLSFLLFAGALHADFSSFRTRRLTIG
                     VMACLGTLISTFVVGTVMWLLLGLFEIEFPFIWALVFGALISPTDPVAVLSLFKTVEV
                     PDTLQAKMAGESLFNDGIGVVVFTVVVAIAVTDNGQGGNMGAIEIIQLFLTEAVGGAV
                     LGLAAGYIGYRAMYGIDEPSLEVLISLALVMVTYALALSLHMSGPIAMVIAGLFIGNR
                     GVKYAMSEQTREYVLTFWTLVDEILNSILFLLIGLEVLVVAESIDLLGIAFLAIPVTL
                     FARSLSVTIPIAILSRWETFTKGAVPVLIWGGLRGGIAVALALSLPDNEYKAAILSIT
                     YGVVLFSIIVQGLTVKPLVKRMVG"
BASE COUNT          465 a          420 c          382 g          359 t
ORIGIN      
        1 aagacccgca taaataaatt gtttgttgga aatggctgtg gaaattgatg tcatcgtacc
       61 gctccttcag attaacagtg aaactaagaa ggagcatcat gcagcatgta gcatccttca
      121 gcctcatagc atctttcggc tattaactgc cgttaatcag tttcaaaatc atggcagctt
      181 tagccccgaa agcggtcatt caaccgacca tccttttaac caacggtttt acggtcagac
      241 cctggacgat tattgaaaac agcacgacac cataagtgat gctcaaaatg gccgccttgt
      301 attcattgtc tggcaaggat agggctaggg caaccgcgat tccgccacga agcccgcccc
      361 atatcaacac tggcactgca cccttggtga aggtttccca gcgtgagagg attgcgatgg
      421 ggatggtgac actgagtgac cgagcaaaga gagttacagg tatcgccaga aaggcaattc
      481 ctaaaaggtc gatgctttcg gcgacgacca acacttccag gccgataagc aggaatagga
      541 tagaattaag aatctcgtca accagcgtcc agaacgtcag aacgtattca cgggtctgct
      601 cgctcatggc gtatttaacg cctctgttgc cgataaacag gccggcgatc accatggcaa
      661 tcggcccact catatggaga gaaagggcta acgcataagt gaccatcacc agcgccaggg
      721 agattagaac ttcgaggctc ggttcatcga tcccatacat ggctcggtaa ccgatatatc
      781 cagcggctaa gccaaggacc gcgccgccga cggcttcggt aaggaacagt tgaatgattt
      841 cgatcgcccc catattgccg ccttgtccgt tatcggtaac agcaatcgcc acgacgaccg
      901 taaagacgac gaccccaatg ccatcattga acagagattc acccgccatc ttagcttgta
      961 aggtgtcggg gacctccacc gttttgaaaa gactaagaac tgcgacggga tcagtggggc
     1021 tgatcaacgc gccgaatacc aacgcccaga taaagggaaa ctcaatctca aacaatccca
     1081 ataagagcca catcaccgtc ccgaccacga aggttgaaat caaagtgcca agacaggcca
     1141 tcacgccgat tgttaagcgc cgggttctga aggaggaaaa atcggcatgc aaggcaccgg
     1201 cgaacaatag gaagctcagc atgccgtgca tcagagtttc attgaagtcg atttgatgca
     1261 gtacgcccgt gatttgcttg ccaatgtgaa atgacggttg gatcaaatca aatccaataa
     1321 tcgacagcga agcagcaagc gcgatcacca cgagtccgat cgtgtgtggt aggtgcaaaa
     1381 atcggtgatt aatgtagcca aataaggcgg agagccccac aaggatcgcg ccaatgctaa
     1441 atatgctcat cgttcccttt atctcattcc ataacgaact tcgtttgcag tttcctctga
     1501 acctacagta attcaatacc tctaccaatg tctccttctg gcggcactgt cagactaaaa
     1561 tcaactttga cgatgtcgca gcattctcat aatgttttgg gatgaaaaat tccaatcctt
     1621 ttcgct
//
LOCUS       DASCNL010000727         1133 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001476206, whole genome shotgun sequence.
ACCESSION   DASCNL010000727 DASCNL010000000
VERSION     DASCNL010000727.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001476206"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1099)
                     /gene="prfB"
                     /locus_tag="QF359_09665"
     CDS             complement(join(<1..1029,1031..1099))
                     /gene="prfB"
                     /locus_tag="QF359_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_121218802.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HJO87217.1"
                     /translation="MRAEIESQVSEIEQSIELLRRRLDYDKAVRRIDELNALAEDPKF
                     WDDPTKAQGLMRERTKLETGLKAVDEITGNLNDNVELLELGEAEDDQEVVKEAEEAIG
                     ALGGKVKTARIQALLSGEADGNDCYLEIHPGAGGTEAQDWASIMLRMYTRWAESHGYK
                     LEWLEESAGEEAGIKSVTLRVNGTDAYGWLKTESGVHRLVRISPFDSSARRHTSFASV
                     WIYPVIDENIKVEVEEKDLRIDTYRASGAGGQHVNKTDSAIRITHLPTGIVVQCQNDR
                     SQHRNRAAAYDMLRARLYEVELQKREDQAQAEHDAKTDIGWGHQIRSYVLQPYQMVKD
                     LRTEVETSNTKAVLDGDLDDFMAAALAARIEG"
BASE COUNT          243 a          330 c          268 g          292 t
ORIGIN      
        1 cccttcaatc cgcgccgcca gggcagcggc cataaaatca tcgagatcgc catcaagcac
       61 agccttggta tttgaagttt ccacctcggt gcggaggtct ttgaccatct ggtagggctg
      121 caaaacgtaa gagcgaatct gatgacccca gccgatatcg gtttttgcat catgttcagc
      181 ttgcgcttgg tcttcacgtt tttgcaactc aacttcataa agccgggcgc gcaacatatc
      241 gtaagcggcg gcgcggttgc gatgttggga gcggtcattc tgacactgca cgacgatgcc
      301 ggttggtaga tgcgtgatgc gaatggctga atcagtttta ttaacatgct gaccaccagc
      361 gcccgacgcc cgataggtat cgatgcgcaa atctttttct tcaacttcga ctttgatatt
      421 ttcgtcgatc accggataaa tccaaaccga cgcaaaactg gtgtgccgcc gagcacttga
      481 atcaaacggc gatattcgca ccagtcgatg tacaccgctt tcggttttga gccaaccgta
      541 ggcatccgtg ccattgaccc tgagagtcac cgatttaata ccagcctcct cgccggcgct
      601 ttcttccagc cattccagct tataaccatg gctttcggcc catcttgtat acatccgtag
      661 cataatagag gcccagtcct gagcttcggt accgccagcc cccggatgga tttccagata
      721 acagtcattg ccgtccgctt cacccgacaa caacgcctgg atgcgggctg ttttgacctt
      781 gccacccaac gcgccaatgg cctcttcggc ctccttgacg acttcttggt cgtcttcggc
      841 ttcacccagc tccaacagct caacattgtc gtttagatta ccggtaattt catcgacagc
      901 tttgaggccg gtttcgagct tggtgcgctc acgcatcaaa ccttgcgctt tggtagggtc
      961 gtcccagaat tttggatctt cggcgagcgc gtttaactcg tcgatacgcc tgacagcttt
     1021 gtcatagtca aagccgcctc ctcagcagct cgatagactg ctcaatctcg ctgacttggc
     1081 tctcgatctc tgcgcgcatg ggatggaaac ttccaaacaa tttatagctt gaa
//
LOCUS       DASCNL010000728         3431 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001487809, whole genome shotgun sequence.
ACCESSION   DASCNL010000728 DASCNL010000000
VERSION     DASCNL010000728.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3431)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3431)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001487809"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="QF359_09670"
     CDS             <1..291
                     /locus_tag="QF359_09670"
                     /inference="COORDINATES: protein motif:HMM:NF024858.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HJO87218.1"
                     /translation="TYKHVRNNVTIHGHRTSMSLETAIWSGLEEICKREDITFNQLCS
                     LIDRSRETTSRTSAVRTFIVNYYRYITDKCSDRNCIEGKVGIGLELIAVKSD"
     gene            complement(307..861)
                     /locus_tag="QF359_09675"
     CDS             complement(307..861)
                     /locus_tag="QF359_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2889 domain-containing protein"
                     /protein_id="HJO87219.1"
                     /translation="MPLSPPVNRKHIHTREIRCVGYEREDGLWDIEGRITDTKTYTFD
                     NRERGMISAGTPVHDMFLRLTVDSELVVQDAEASTEAGPFHICPAVNDGVKALKGLKI
                     TPGWTRNVHKAIGGIKGCTHINQLLVGPLATTAYQSIIPKKASLTKKPEKRPIVIDTC
                     HAFTADGPIVKNFWPDYYEGAETD"
     gene            complement(952..2220)
                     /locus_tag="QF359_09680"
     CDS             complement(952..2220)
                     /locus_tag="QF359_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HJO87220.1"
                     /translation="MLTMLAAIAVLIILSAFFSGSETALTGASRPLMHQLEQKGNHFA
                     QTVNKLQEGKGQLIGAILIGNNLVNILASALATSILIGKFGEAGIAYATVIMTALVVM
                     FAEILPKTYALQNADRTALRIAPIIRPLVFILSPITFATQWAVRIALRVFGVHLHSGE
                     DFVSKTDELRGAIELHQSGEEDDETVQHERAMLRSVLDLAEVEVGEIMVHRKTVTMIN
                     ANEPAAEIVSQVLASPYTRMPLWRDQPDNVIGVIHTKEVLRAIHDNDGNFDINIEDLA
                     SEAWFIPETTPLLDQLQAFRDRHEHFALVVDEYGSLEGVVTLEDILEEIVGDIVDEHD
                     ISVPGLRPQPDGSYIVDGSFTIRDLNRQFEWNLPDEEAATIAGLILHESRRIPEVGQA
                     FMFYGLRFDIMRRHRHQITAIRITPPQPAE"
     gene            complement(2233..3351)
                     /gene="aroB"
                     /locus_tag="QF359_09685"
     CDS             complement(2233..3351)
                     /gene="aroB"
                     /locus_tag="QF359_09685"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HJO87221.1"
                     /translation="MPKYETLNVELGERSYDIHVGDGLLAEAGALIKPVIRSQRVIVV
                     TDENVAPLYLASLEISLNTAGLNSESIILPAGEQTKSIDYFEQLFDQILAMKIDRQCA
                     LIALGGGVIGDLTGFAAASVLRGIDFVQIPTTLLSQVDSSVGGKTGINSQHGKNLVGA
                     FYQPRLVLADIDTLDSLPKREVLAGYAEVAKYGLIDNPDFFTWLEQIGCELCNGNKNH
                     QHQAVVMSCRSKAKIVAEDETEQGRRALLNLGHTFGHTLEAETGFSEKLLHGEAVGLG
                     ICLAFDLSAHLGLCTQDDVNRVRAHYAAVGLPTSPTDVAGITWNTDALLDHMQSDKKV
                     EDGKITFILAHAIGETFVARDIDMADARLIIDNAIRCD"
BASE COUNT          877 a          835 c          834 g          885 t
ORIGIN      
        1 acttacaaac atgtacgcaa taatgtaacg atccacggtc accgaactag catgagcctt
       61 gaaacggcga tttggtctgg cttggaagaa atttgtaaac gcgaagatat cacttttaat
      121 caattatgtt ctttgatcga ccgttcacgg gaaaccacca gcagaacatc tgcggttcgc
      181 acttttatag tcaattatta ccgctatatt actgacaaat gttcggatag gaactgtatt
      241 gaaggtaaag taggcatagg gcttgagtta atcgcagtta aatccgatta gtctaaactt
      301 caatacctaa tcagtttctg ccccttcata ataatcgggc cagaaattct taactatcgg
      361 gccatcagcg gtgaaagcgt gacaagtgtc aataactatc ggccgctttt ccggtttttt
      421 tgtgaggctg gcctttttag ggatgatcga ctgataagct gtcgtcgcta agggccccac
      481 taataattga ttgatatggg tgcagccttt gatgccgccg atggctttgt gcacattacg
      541 ggtccagccg ggagttattt tcaatccttt gagcgctttg accccgtcgt taacggctgg
      601 gcagatatga aatggcccag cttcggttga tgcctctgcg tcctgaacga ccaattcact
      661 atcgacggta agacgaagga acatatcgtg gaccggcgtg ccggcgctaa tcataccgcg
      721 ttccctattg tcaaaagtat aggtcttggt gtcggtgata cgcccttcaa tatcccacaa
      781 accatcttca cgctcataac ccacacaacg tatttctcgg gtgtggatat gtttccgatt
      841 tacaggtggt gacaacggca tgataaaact ccttaagacc tggtgattca attcccaggc
      901 cggtcttagg ttaataaatg cgattggtca aatcgatcgg agatgggcgg tttattcagc
      961 tggttgcggt ggagtgatgc gaatggccgt gatctgatgg cgatgacggc gcataatatc
     1021 aaagcgcagt ccataaaaca taaaggcttg accaacctcg ggaatacgcc tggattcgtg
     1081 aagaattagg ccggcaatag tggcggcttc ctcatccggc agattccatt caaattggcg
     1141 attaagatcg cggatggtaa aactaccgtc gacaatataa gagccatccg gctgcggtct
     1201 gagccccggt acgctgatgt catgttcatc gacaatatcg ccgacaattt cttccaatat
     1261 atcttcgagc gtgacgacac cttcaaggct gccatactca tcgacaacga gagcaaaatg
     1321 ttcatgacga tcacgaaaag cctgtaattg atccagcaag ggcgtggttt ctggaataaa
     1381 ccaggcttca gacgccaggt cctcaatatt aatatcgaaa ttaccgtcat tgtcgtgaat
     1441 agcgcgcaag acctctttag tgtgaataac accaatgaca ttgtccggct gatcacgcca
     1501 caacggcatc ctggtataag gactggcgag tacctgactg acgatctctg cggcgggctc
     1561 attggcatta atcatggtga cggttttgcg gtgaaccata atttcaccaa cttcgacttc
     1621 cgccagatcg agtacactgc gcagcatggc gcgttcatgt tgcactgttt cgtcatcttc
     1681 ttcgccactt tgatgaagct cgatcgcgcc ccgcaattca tcggttttgg aaacaaagtc
     1741 ctcaccgctg tgaagatgaa cgccaaatac acgcagggca atccgcactg cccattgggt
     1801 cgcaaaggta attggcgaga gaatgaaaac caaagggcgg ataattggtg ctatgcgcaa
     1861 ggctgtccga tcggcatttt gcagcgcata ggtcttaggc aaaatctcgg caaacatcac
     1921 cactagtgcc gtcatgatca cggttgcata ggcaatacca gcttcgccga acttgccgat
     1981 aagaatactg gtagccaacg cagaggccag gatattgact agattattgc cgatcaaaat
     2041 cgcgccaatg agttggcctt taccttcttg cagtttattg acagtctgag cgaagtgatt
     2101 acctttttgt tccagttggt gcatcagcgg gcgcgaggca ccggtcagcg ccgtttccga
     2161 gccggagaaa aaagcagata aaataatcaa tacagcaata gcggccagca tggtcagcat
     2221 aatattatcc agttagtcgc acctaatcgc attgtcaatg atcaggcggg catccgccat
     2281 gtcgatatcg cgggcgacga aggtctcgcc aatcgcgtgg gcaagaataa aggttatttt
     2341 gccgtcctcg acttttttat ctgattgcat atggtccaat agagcatcgg tattccaggt
     2401 gatcccggca acgtcggttg ggctggttgg caggccaaca gcagcgtagt gcgcgcgcac
     2461 gcgatttaca tcgtcttggg tgcataatcc caggtgagcc gaaagatcga aggctagaca
     2521 tataccgagg ccaacagctt caccgtgcaa caatttttcg ctgaaaccgg tttcagcctc
     2581 cagtgtgtga ccaaaggtat gaccgagatt tagcaaagcc cggcggcctt gctcggtttc
     2641 gtcttcggcg acaatcttcg cttttgaccg acaactcata acaacggctt ggtgctggtg
     2701 gtttttattg ccgttgcaga gttcacaacc aatttgttcg agccaggtaa agaaatccgg
     2761 attatcgatg aggccgtatt tggctacttc cgcatagccg gccagcactt cgcgtttcgg
     2821 caagctgtcc aatgtatcga tatcggcaag caccaagcgc ggttgataaa aggcgccgac
     2881 taaattcttt ccgtgttgtg agttgatacc ggttttaccg ccaactgagc tgtcaacttg
     2941 ggacaataaa gttgtcggta tttgcacgaa atcgatacca cgcaacaccg acgccgccgc
     3001 aaaacccgtt aaatcgccga taacgccgcc gcccagcgca atcagcgcac attggcggtc
     3061 aattttcatt gctagaattt ggtcaaaaag ctgttcaaaa taatcgatgc ttttggtttg
     3121 ctcaccagcc ggcagaatga tgctttctga gtttagcccc gctgtattaa gtgaaatctc
     3181 caagcttgcc aaataaagtg gagcaacgtt ttcatcagtc accacgatga cgcgctggct
     3241 acggattaca ggtttaatta atgcgccagc ctcagccagc agcccatcac cgacatggat
     3301 atcatagctg cgttcaccca actcgacatt aagtgtttca tatttaggca ttaggggttt
     3361 ggttcctttg gtatatttgc cggtgggtga ttttttaact cccgcatgat ccttttggcc
     3421 gtttccgatg c
//
LOCUS       DASCNL010000729         1280 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001489617, whole genome shotgun sequence.
ACCESSION   DASCNL010000729 DASCNL010000000
VERSION     DASCNL010000729.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1280)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1280)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001489617"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="QF359_09690"
     CDS             complement(<1..607)
                     /locus_tag="QF359_09690"
                     /inference="COORDINATES: protein motif:HMM:NF020295.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU N-terminal domain-containing protein"
                     /protein_id="HJO87222.1"
                     /translation="MFIQTEAMPDPLRMKFFPGEAVMPTGSAEFFDEEAAERSPIATR
                     LFQVDGVETVTLYEEFIMVIKEETFDWQLMKPMILGAIMDHYTAGDPILLGATVADLD
                     LETALEAFFEDADQDQKAVAQIVELMESRVAPAAEQMGGEVIYKGFKDGVIYVEFIGP
                     TSALAGGMTNIFGHYIPDVRAVKDYRDAIPKPGLDTDEGRAI"
     gene            990..1187
                     /locus_tag="QF359_09695"
     CDS             990..1187
                     /locus_tag="QF359_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87223.1"
                     /translation="MTAFGYRIGIILVNANASVRVNTFFTGKLFKLPKRRIIETHNEE
                     SILAGMVEKSANEFSGGDVYA"
BASE COUNT          336 a          304 c          301 g          339 t
ORIGIN      
        1 taattgcgcg gccttcatca gtatcaaggc cgggtttcgg gatcgcatca cgataatctt
       61 tgacggcgcg aacgtccggg atgtagtgac cgaagatatt ggtcataccg ccggcaagag
      121 ccgaagtcgg accaataaat tcgacataga taacgccgtc cttaaagcct ttgtaaatta
      181 cttcaccgcc catttgttct gcggcaggag cgacacggct ttccatgagc tcaacgattt
      241 gcgcgacagc tttctgatct tggtcggcat cctcgaaaaa agcctcgagg gcggtttcta
      301 aatctagatc ggcaacggtt gcacctagca agattgggtc gcccgccgtg taatggtcca
      361 taattgcacc cagtatcatt ggcttcatta actgccaatc aaaggtctct tctttaatca
      421 ccatgataaa ttcttcatag agcgttacag tttctacacc atccacttga aacaagcgtg
      481 tcgcgattgg agagcgctcg gcggcttctt catcaaagaa ttcagcggac cctgtcggca
      541 tcacagcttc gcccggaaaa aacttcatgc gtagtggatc gggcatcgcc tcagtttgga
      601 taaacattca aaatctccga aagaattttt tttcgctcca ttgggaacgg tacatcacat
      661 ggtcctatat ttagtgcttt aaattggatt tttccagcac gatattaata taaccatgtt
      721 aaccgtaggg ttttaggggt ggtagcggca aattccgagc ttggtcagcc agtttaaagt
      781 tcggatgaga tcgtagagtt caaacgggca aatcaacgca tcccaacttt gtgtcggggc
      841 agttaaatat tgcccgaccg tatccatgat actgtcagtt gaactcgcat gaacgaggct
      901 gcttacacta tagagatact atagagattt tggccaaatt gccgtcgtgt ccagatatgt
      961 tttaagaatc ccggatcgca tctaaatagg tgaccgcttt cggctatcgt atcggcatca
     1021 ttctggttaa cgccaatgca tcggtccggg tcaacacgtt cttcactggc aaattgttta
     1081 aactgcccaa gcgccgcatt attgaaacac acaacgagga aagtatcttg gctggcatgg
     1141 tggaaaaaag cgcgaacgaa ttttcgggtg gcgacgtcta tgcctaggga cgctcgtcgt
     1201 cctcactatg accatcgaaa tttattgccg ttgacatcgg ggcaaggtgc ctgagcaata
     1261 accaatatta agaaaatgct
//
LOCUS       DASCNL010000730         3327 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001496095, whole genome shotgun sequence.
ACCESSION   DASCNL010000730 DASCNL010000000
VERSION     DASCNL010000730.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3327)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3327)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001496095"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            270..1889
                     /locus_tag="QF359_09700"
     CDS             270..1889
                     /locus_tag="QF359_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HJO87224.1"
                     /translation="MPNAYEELDQVTANFVPLSPLSFIERSAKVYPNRVAVIHGERRY
                     TWAETYARSRQLADALVKRGVGRGDTIAIMGANTPETYEAHFGVPMTGAVLNTLNIRL
                     DAATIAFILDHGEAMAFITDREFSPTVKAALEQCDVEPIVIDIDDVLAEGGELIGEMD
                     YEAFISEGDLDYDWHLPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAIGNVMAWD
                     MDQHPVYLWTLPMFHCNGWCFPWTIAAHAGTNVCLRNVSAKGIFDAIADHKIDHFCGA
                     PIVLGMIVNASKEEQKPFDYIIHVMTAGAPPPVAILQSMSDAGFDVTHAYGLTETYGP
                     ATVCAWQDEWGKLAAAGQAAMKSRQGVNYVVLDQLNIIDPETMEPMPADGETMGEVMF
                     RGNNVMKGYLKNPDTTEKSLAGGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISS
                     IEVENALFQHPTVLLAAVVAKEDEKWGETPCAFIELKPDAGEVTEEEIINFARDNLAH
                     FKCPRHVVFGELPKTSTGKIQKFVLRERANA"
     gene            1911..2528
                     /locus_tag="QF359_09705"
     CDS             1911..2528
                     /locus_tag="QF359_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HJO87225.1"
                     /translation="MGDLDVYEKQNFGNSSGIGTNPAMLIVDFVNGFADPEQFGGGNI
                     QAAIDKTVDLLAFARAQNMPVASTRVVYADDGSDHGVFCLKAPGLKALTEDAPASQIV
                     DALAPIDGEYVVSKTQPSGFFGTDLADWYLGRGVDTVLVTGCTTSGCIRASVIDAMSY
                     NFKTVVVTDCVGDRALGPHEANLFDMGQKYADLMTADEVMAAING"
     gene            complement(2562..2720)
                     /locus_tag="QF359_09710"
     CDS             complement(2562..2720)
                     /locus_tag="QF359_09710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87226.1"
                     /translation="MVNVFSPETSYGEHTKLGKPVITCNQATLWAALRAAGIDDRLED
                     RGLLLKKY"
     gene            complement(2720..>3327)
                     /locus_tag="QF359_09715"
     CDS             complement(2720..>3327)
                     /locus_tag="QF359_09715"
                     /inference="COORDINATES: protein motif:HMM:NF012885.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87227.1"
                     /translation="SETFNQRNQATGIAETLAEFSEIADKVVQAGLKLSATIGAAFGC
                     PFEGNVETAKVARIAKQLTGGGCVEIGMADTIGAGVPTQVTEIYGLVRDAVGMDIGLG
                     FHLHNTRNTGFANAAIAVGEGALFLDSSVGGLGGCTFAPNATGNIATEDLAYMLRNMG
                     YETGIDIDTYIGIANWVEGFFDAPLPGQIMKAGLFPETAVQ"
BASE COUNT          839 a          866 c          835 g          787 t
ORIGIN      
        1 tgatggcttt cccaggacag acttttttct tccaaaagaa gtctcacccg cgccgagcag
       61 tttgatatgt gggcgtgata aaggtgtaaa cctttaaagt ctaatactgc caaattttgt
      121 ggttcaacaa aaaccatcga ccctactcct cctgcctaag tgaaagggtt cgtccttgta
      181 acctagcatc tccttatggc aatgtttagg caagaaataa agctgggaaa ctcaccacaa
      241 tatcggcaaa acaccgcgag gaaaactcaa tgcctaatgc ctatgaagaa cttgatcagg
      301 tcacggcaaa ctttgtgccg ctgtcacccc tgagctttat agaacgctcc gccaaggttt
      361 atcccaaccg ggttgccgtt attcatggcg agcggcgcta cacctgggcg gagacctatg
      421 cacgctcccg tcaactggct gatgccttgg tcaaacgcgg cgtcggcagg ggtgatacga
      481 tcgcgattat gggtgccaat acaccggaaa cctacgaagc tcatttcggc gtgccgatga
      541 ccggggccgt cctcaacaca cttaatatca ggcttgatgc agcaaccatt gcttttattc
      601 tcgatcacgg tgaagcgatg gccttcatca ccgaccggga attctcgccc accgtcaaag
      661 cagcccttga acaatgtgat gtagaaccta tcgtcattga catcgatgat gtgttggccg
      721 aaggcggcga actcatcggc gaaatggatt atgaagcctt tatatccgaa ggtgaccttg
      781 attacgactg gcacttgccg gatgatgagt ggcaggccat atcgcttaat tacacatccg
      841 gcacgacggg taatcctaag ggtgttgtct accatcatcg cggcgcctat ttaaatgcga
      901 ttggcaatgt gatggcttgg gatatggatc agcatcccgt ttatctatgg acactaccga
      961 tgtttcattg caatggctgg tgtttccctt ggaccattgc tgcccacgcc gggacaaatg
     1021 tctgcctgcg caatgtcagc gccaaaggca tatttgatgc catcgccgat cataaaatag
     1081 atcacttctg tggcgcgcca atcgtgcttg gtatgatcgt taatgcctct aaagaagaac
     1141 aaaagccatt tgactacatc attcatgtca tgacggctgg cgcaccaccg ccagtcgcca
     1201 tcctgcagtc aatgagcgat gctggatttg acgtaaccca cgcctatggg ctgacggaaa
     1261 cctacggccc ggcaaccgtt tgtgcctggc aagatgagtg ggggaaattg gcggccgctg
     1321 gccaagcggc aatgaaatcc cgccagggcg ttaactatgt cgtacttgat cagctcaata
     1381 ttattgaccc cgaaaccatg gagccgatgc cagccgatgg cgaaaccatg ggcgaagtga
     1441 tgtttcgcgg caacaacgtg atgaagggtt atctcaaaaa cccggacacc actgaaaagt
     1501 ccttggccgg cggctggttc cattccggcg atcttggtgt catgcatccg gatggctata
     1561 tccaactgaa agaccgctct aaggatatta ttatttccgg cggcgagaac atttcctcca
     1621 ttgaagtgga aaatgcacta tttcaacatc ccaccgtatt gctggcggct gtcgttgcca
     1681 aagaggatga aaaatggggc gaaacgccct gcgcttttat tgaactaaaa cccgatgccg
     1741 gtgaggtgac ggaagaagaa atcattaatt ttgcccgtga caatttggcg cactttaaat
     1801 gcccgcgtca tgttgtcttc ggtgaactgc caaaaacctc aactggtaaa attcaaaaat
     1861 ttgtcctgag ggaaagagca aatgcctagg gctgggcggg gaaattagct gtgggtgatc
     1921 tcgatgttta tgagaaacag aatttcggca attcaagtgg aattggtacg aaccctgcta
     1981 tgctgatcgt cgattttgtt aacggcttcg ccgatcccga acaattcggc ggcggcaata
     2041 ttcaagccgc catcgataag acggttgatc tgctggcctt cgcccgcgca caaaatatgc
     2101 ccgttgcttc aacccgggtg gtctatgccg atgacggctc tgaccatggg gtgttttgtc
     2161 ttaaggcacc aggcctgaaa gcgctgacag aagacgcacc agcgagccaa attgtcgatg
     2221 ctttggcgcc aatcgatggt gaatatgtcg tcagcaaaac tcagccaagc ggattttttg
     2281 gcactgattt ggctgactgg tacctgggcc gaggcgtcga tacggtcctg gtcaccggct
     2341 gtacgacgtc cggctgtatt cgcgcctcgg tcatcgatgc gatgagctat aatttcaaga
     2401 ccgtggtggt gaccgattgc gtcggtgacc gcgccctcgg cccccatgaa gcaaatttat
     2461 ttgatatggg acagaaatat gccgacctga tgaccgccga cgaggtcatg gcggcgataa
     2521 atggttaatt tttctaaagg tgcctgtcac ctttgaaaaa attaatactt tttgagcaac
     2581 aacccacgat cttcaagccg atcatcaata cccgctgccc gcaaggccgc ccagagcgtt
     2641 gcttgattgc aggtgatcac cggcttgcca agcttggtgt gctctccata cgaagtctca
     2701 ggagagaaca cattcaccat tattgaacgg cagtctcggg aaatagaccc gctttcatga
     2761 tctggcccgg cagcggtgcg tcaaaaaagc cctccaccca attggcaatg ccgatatagg
     2821 tgtcaatatc aatacctgtt tcatagccca tattacgcag catataggcc aaatcctcgg
     2881 tggcgatatt accggtcgca ttgggggcaa acgtacaccc ccccaagccg ccaacggacg
     2941 aatccaaaaa taacgccccc tcacccaccg caattgccgc attggcaaaa ccggtgttgc
     3001 gagtattgtg aagatgaaaa ccgagcccaa tatccatgcc gacagcgtca cgaacaagtc
     3061 cataaatttc cgtcacttgg gtcgggacac cggcaccgat ggtatctgcc atgccaattt
     3121 cgacacagcc gcctccggtt aattgtttgg cgatacgggc aactttagca gtttctacat
     3181 taccctcaaa tgggcagccg aaagcagcgc caatggtagc ggataacttc aatccggcct
     3241 gcaccacttt atcagcgatt tcagaaaatt cagccagtgt ctcagcaatg ccggtggcct
     3301 gattgcgctg attaaaggtt tcactgg
//
LOCUS       DASCNL010000731         1610 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001496954, whole genome shotgun sequence.
ACCESSION   DASCNL010000731 DASCNL010000000
VERSION     DASCNL010000731.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001496954"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(84..1502)
                     /gene="pyk"
                     /locus_tag="QF359_09720"
     CDS             complement(84..1502)
                     /gene="pyk"
                     /locus_tag="QF359_09720"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HJO87228.1"
                     /translation="MRRERAAKIISTLGPSSTSPEVIANLFEAGADVFRLNFSHGQHE
                     EHKELYDSIRKIEADYNRPIGIIADLQGPKIRVGNFVDKKIVLGNSVNFTLDSDQDKD
                     GDEKRVSISNPEIYPSLEPGVELLLDDGKLKLVVEQNNGDSIDTKVLVGGILSNHKGI
                     NIPGAILPMSALTEKDRRDLQFALDIGVDWIALSFVQRPEDVAEARALVVGRAGVLAK
                     LEKPLAIEHLKQIVELADAIMVARGDLGVEAPPEDVPGLQKKIIRRARSEGKPVIVAT
                     QMMESMINSPTPTRAEASDVATAVFDGADAVMLSAETAAGEYPVEAVSIMDRIIRSAE
                     QDDHYKLSNMRERRQTRGTDADAITAAAKQVAQTLNAAAIVTFTTTGSTTLRAARERP
                     TVPILGLTPDVKTARRLVLAWGVHPVETSHFTEFIDVVNCATEVATKEKFAAPGQRLI
                     ITAGVPFGTPGATNVLRIVWAE"
BASE COUNT          404 a          426 c          366 g          414 t
ORIGIN      
        1 gcaataatgg aaaatagctg agtgatcatg agggcgttgt gctggaggat ttagcacccg
       61 tcaagcaacg cactcgaagg aacctattcc gcccagacaa tgcgcagaac gttggttgca
      121 cccggtgtgc caaacggcac gccagcagta atgatgagac gctgtcccgg agcagcgaat
      181 ttttctttcg ttgcaacttc ggtcgcgcaa ttgaccacat ctataaattc tgtgaaatgc
      241 gatgtttcca ccggatgaac gccccaggcc aacaccaatc gccgcgccgt ttttacatca
      301 ggtgttaagc ctaaaatggg tacggtaggc cgttcccgcg ccgcccgtaa agtcgtcgag
      361 cctgtcgtcg taaaggtcac gatggcggcc gcattcaacg tttgggcgac ctgcttggca
      421 gcggccgtaa tcgcatctgc atccgtaccc cgggtttgcc ggcgctcccg catatttgat
      481 aatttatagt gatcatcctg ctcggcacta cggattatcc gatccataat cgacaccgct
      541 tcaaccggat attctcccgc tgcagtttca gccgatagca taaccgcgtc agcgccatca
      601 aaaaccgctg ttgcaacatc ggacgcctcg gcacgggttg gagtcggtga gttgatcatg
      661 ctctccatca tttgcgtggc gacaattact ggtttgcctt ccgagcgcgc ccggcggata
      721 attttctttt gcaagcctgg tacatcttcc ggcggcgcct ccacgccgag atcaccgcgg
      781 gcaaccataa tggcatccgc caattcgacg atctgcttta aatgttcaat cgccaacggt
      841 ttttccaatt ttgccaaaac tccggcgcgc ccgacaacta atgcccgagc ttcagcaaca
      901 tcttccggac gctgaacaaa agaaagcgca atccaatcaa cgccgatatc gagggcaaat
      961 tgaagatcgc gccggtcttt ttcggtcaag gcagacattg gcaagatagc acccggaata
     1021 ttgatcccct tgtgatttga aaggatgccg cccaccagta ctttggtgtc aatggaatca
     1081 ccgttattct gctcaactac cagctttaac ttgccatcat cgagcaaaag ttcaacgccc
     1141 ggctctaacg aaggataaat ttccgggttg gatattgaaa cgcgtttttc atcgccatct
     1201 ttgtcctgat ccgaatcaag cgtaaaattt acactatttc cgagcactat ttttttatca
     1261 acaaaattgc caacacggat tttaggcccc tgaagatcgg caattatgcc aattggccga
     1321 ttatagtcgg cctcaatttt acgaatggag tcgtagagtt ctttatgttc ctcatgttgg
     1381 ccatgactaa agttcaaccg aaatacatca gctccagcct caaacaaatt ggcgattact
     1441 tccggagatg tactagaggg acctaaagta gatataattt ttgccgcacg ttctcttctc
     1501 atgttggcca gcataggtat ttttcaaaac atgtcacttt aaaaaaatca actatacaat
     1561 ctgcttggat tggtacagtg acatgctggt tatctttcgg atatgattga
//
LOCUS       DASCNL010000732         1274 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001497303, whole genome shotgun sequence.
ACCESSION   DASCNL010000732 DASCNL010000000
VERSION     DASCNL010000732.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001497303"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            38..433
                     /locus_tag="QF359_09725"
     CDS             38..433
                     /locus_tag="QF359_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6165 family protein"
                     /protein_id="HJO87229.1"
                     /translation="MAVKSVLVDIAPAELIDKITILAIKSECMDDEAKLANVRHELDI
                     LTANRDKVIQASPELDVLAAKLKTVNEALWKIEDDIRECEAAKNYSQKFIDLARAVYV
                     SNDERANLKREINLLLGSDIVEEKSYKPY"
     gene            complement(430..888)
                     /locus_tag="QF359_09730"
     CDS             complement(430..888)
                     /locus_tag="QF359_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HJO87230.1"
                     /translation="MPQPIDIIEQITGESGAYGFAVRLSQPLTLEIGKFAQVSLPKGL
                     YFYGGSAFGPGGLKARLGRHIRPKSKLHWHIDHVTSAGNMVAAGVVENSSECKIIAAA
                     SAMPGALIPLPGFGSSDCRNCASHLVKLRRISDISKIFEAVEAAQSWRFA"
BASE COUNT          364 a          302 c          286 g          322 t
ORIGIN      
        1 tgaaaccaat ccattgcaaa ttcagaaaaa gatatagatg gcggtgaaat ctgtccttgt
       61 tgatatcgcg cccgctgaat tgatcgataa aatcaccatt ctcgccatta aatctgagtg
      121 tatggatgat gaagccaaac tcgcaaatgt acgccatgag ctggatattt tgaccgccaa
      181 cagagataaa gttattcaag catcacctga gctggatgtg ttggcggcca aactgaaaac
      241 cgtcaatgaa gctttgtgga aaatcgaaga cgatatccgt gagtgcgaag cggctaagaa
      301 ttattcccag aaatttattg atcttgcccg tgcggtttat gtctctaatg atgagcgcgc
      361 caatttaaaa cgtgaaatca atctgctgtt gggttcagac attgttgaag aaaaatccta
      421 taaaccttat taggcaaatc tccagctctg cgcggcttca accgcctcaa atattttact
      481 gatatcactg atccgccgaa gtttaaccag atgtgaagcg caattgcggc aatccgagct
      541 gccaaaaccc ggcagtggta tcaacgcccc cggcatggct gaagccgcag caataatctt
      601 acattctgaa ctattttcaa ccacccccgc ggctaccata ttcccggcgc tggtgacatg
      661 atcgatatgc caatggagct tggatttggg tcggatatgt cgcccgagcc gggcttttaa
      721 gccgcctggg ccaaacgcac tgccgccata gaaataaagc ccttttggca ggcttacctg
      781 ggcaaattta cctatctcaa gcgttaatgg ctgagatagt cgcacagcga acccataggc
      841 accagattct cctgtaattt gttcaataat atcaataggt tgcggcataa tctattttaa
      901 cggcaataac gatcatttag caacataatt gcattgttta gagcgaaaaa cgcaatttag
      961 agcacgagtg agccgccaaa catgcatggc atggaacaaa aatattcaga tagtgagatt
     1021 atcttccgtg aaggtgatcc aagctcgtcg gcatttgtaa ttctctccgg tcaggtcgaa
     1081 cttctcaaaa acgcacccaa tggcatggac cgcaaacttt ttactcgctc gcttaaccga
     1141 ggatttggag catttagaag gcgctgccga agcctttgat aaggctcttg agatctatca
     1201 ggcttatggc gctgccctgt taagccgcgt caccgagcgc aacataacca aggcggagaa
     1261 cttattatgt gccc
//
LOCUS       DASCNL010000733         1141 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001499003, whole genome shotgun sequence.
ACCESSION   DASCNL010000733 DASCNL010000000
VERSION     DASCNL010000733.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1141)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001499003"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            28..600
                     /locus_tag="QF359_09735"
     CDS             28..600
                     /locus_tag="QF359_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethoxyubiquinone hydroxylase family protein"
                     /protein_id="HJO87231.1"
                     /translation="MPRKAKHYGRLPGDPTKDEMIERIIRVDQAGEYGAKRIYEGQLA
                     VLGDTKDGPILREMAAAEEKHLEAFNKMVVERRVRPTALTPLWHIAGFALGAGTALLG
                     REAAMACTVAVEEVIEEHYADQSAKLEALPKNDKENELQHVIEEFKAEEIEHRNIGLE
                     NDAEQAPGYPVLLAAIKSGSRLAIWLSERI"
     gene            615..>1141
                     /locus_tag="QF359_09740"
     CDS             615..>1141
                     /locus_tag="QF359_09740"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87232.1"
                     /translation="MTQKPAADTASLIQGFLWMGGAVLSFLIMAIAVRELSDTMNTFE
                     ILTLRSIVGLAITFAFVMRFGWHEIRTERLKLHLVRNVFHFGGQFGWFLGISLLPLAT
                     VFTLEFTIPVWAAMLAVIVLRERLHHARIIAIICGFGGVLIIMKPGAEVVDLASLIVV
                     GAAFGYAVSYITTKPL"
BASE COUNT          261 a          264 c          321 g          295 t
ORIGIN      
        1 aaatataata cggaattaga gtagccaatg ccccgcaaag caaaacatta tggccggttg
       61 cccggcgatc caaccaagga tgagatgatt gagcggatta ttcgcgtcga tcaggccggt
      121 gaatacggtg ccaaacgcat ctacgaggga caattggctg tgttgggtga taccaaagat
      181 ggtccaattt tacgtgaaat ggcggcggcg gaagaaaaac acctggaggc ttttaataaa
      241 atggtggttg agcgccgagt gcggccgaca gcactgacgc cgctttggca tatcgccgga
      301 tttgccttgg gtgccgggac ggctttgctg ggccgggaag ccgccatggc ctgtacggtt
      361 gccgtcgaag aagtcatcga ggaacattac gccgatcaat ctgctaaact agaagccttg
      421 ccaaaaaacg ataaagaaaa tgagcttcag cacgtgatcg aagagttcaa agcagaggag
      481 attgaacacc gcaatattgg tttggagaat gatgccgaac aagcacctgg ttacccggtg
      541 ctgttagccg cgattaaatc cggctcgcgc ctggccatct ggctctcgga acgcatctag
      601 ggtcgggacc caggatgacg caaaaacctg cggctgatac cgcatctttg atccaaggct
      661 ttctgtggat gggtggggcg gtactatcct ttctgattat ggctatcgct gtgcgtgaac
      721 tctccgatac gatgaacacc tttgagattt taacgcttcg ctcaattgtt ggtttggcca
      781 ttacgttcgc tttcgtcatg cggtttggtt ggcatgagat tagaaccgag aggctcaagc
      841 tccatttagt gcgcaatgtt tttcattttg gtggtcagtt cggctggttc ctgggtattt
      901 cgctgctgcc cttggcaaca gtttttacgc tcgaatttac cattccggtt tgggcggcaa
      961 tgctggcagt tatcgtcctg cgtgagcgac tgcaccatgc gcgcatcatc gccataattt
     1021 gcggctttgg tggtgtttta attattatga aaccaggcgc tgaagtggtt gatctagctt
     1081 cgcttatcgt cgttggcgcg gcgtttggct acgcggtatc ttatatcacg acaaagcccc
     1141 t
//
LOCUS       DASCNL010000734         1210 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001500470, whole genome shotgun sequence.
ACCESSION   DASCNL010000734 DASCNL010000000
VERSION     DASCNL010000734.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001500470"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..690)
                     /locus_tag="QF359_09745"
     CDS             complement(<1..690)
                     /locus_tag="QF359_09745"
                     /inference="COORDINATES: protein motif:HMM:NF025910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJO87233.1"
                     /translation="MDGNQALRADELSIGEYHHRAGNLARAESVYRQVLASDPEHSEA
                     LRLLGLLAHQTGNLEQANNLLSRATKAQPDNVEAYFNLGVVYLDQGAPEKAVAAFEMA
                     LALEPKNFSYLVNFGNALVAAGRFDEAVKQSKRALEIDANCVEAHSNLGQALAKTGNL
                     TGAMKASRRAILLRPEDGRLFNNLGVIEQAIGLLDNANRTYRRALEVDPNCYLAERNL
                     LINALNLPQQSS"
BASE COUNT          319 a          278 c          284 g          329 t
ORIGIN      
        1 actggattgc tgcggcaaat tcagcgcatt gatcagcaga ttacgttccg ccaagtagca
       61 attgggatcg acttccagcg cccggcgata ggtccggttg gcgttgtcca gcaatccgat
      121 cgcttgttca ataacgccga gattgttaaa taaacgccca tcttcaggcc gcagcagaat
      181 ggcgcgcctg gaagctttca tcgcgccggt caaattaccg gtttttgcca gcgcctggcc
      241 gagattgcta tgggcttcaa cacaattggc atcaatttcg agggcacgct tagattgctt
      301 aactgcttcg tcaaatcgac cggcagcaac aagggcattg ccaaaattaa ccaggtagga
      361 gaagttttta ggctccagcg ctaaggccat ttcaaacgcc gctactgcct tttcgggcgc
      421 tccttgatcc aaataaacga cacctagatt gaaataggct tcaacattgt ccggttgcgc
      481 tttggtggcg cgcgacaaaa ggttgttcgc ttgctcaaga ttacctgttt gatgggctaa
      541 taaaccgagt agacggagcg cctcactatg ctctggatca cttgccagga cttggcggta
      601 taccgattca gcccgagcaa gattgcccgc ccggtgatgg tattcaccga tcgaaagttc
      661 atcagcccgt aatgcctgat taccatccat ttggctcgcc actcaatata agggttataa
      721 atatccggcc tatagtggcg aactaatgtt aaagagcggt aaaggtgtcg gaagcaaggg
      781 ctaattattt tttgcgtaaa cgtaagagaa gttcgttata ggagtcgtca ttttttattt
      841 gcgttaatgc ggcatcaaac tttttgataa attccatctc caaattagat ttcttggata
      901 acaacaaggt aaaattcatc tgcgcatata ttttaggcag tgtgatcagc actttttcca
      961 gtccaaaaga actaatcgcc gtattggcaa tggttggatg agaacgtcag cgcggccaat
     1021 attttccatg cgcagacagg ccagtacatt cgacgctgtc atgaaattaa tccgcagcga
     1081 tgaatttgct cgtgattgcc attaaggtgg aacttaaatt tcttaccttt ggttgatttc
     1141 accaaggatt tgagttctaa cctgttcgca taagtataac aggattcaag gaactcactg
     1201 aaatagcatt
//
LOCUS       DASCNL010000735         3515 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001502140, whole genome shotgun sequence.
ACCESSION   DASCNL010000735 DASCNL010000000
VERSION     DASCNL010000735.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3515)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3515)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3515
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001502140"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1288
                     /locus_tag="QF359_09750"
     CDS             <1..1288
                     /locus_tag="QF359_09750"
                     /inference="COORDINATES: protein motif:HMM:NF013086.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO87234.1"
                     /translation="NFNGKLLKPKLGAAVRQSGCKVFNRIMTVDLLTKEGRVVGAMGF
                     QNRTGDVFVFNAKTTIIATGNTNRLYENPRLNPFNTWLCPYNTGDGQMMSFNAGAALT
                     NMEYMRMTVLPKGFSAPGFNALVGMGGRFMNSLGDYYMEENHPLGNKAPRYDVVFNTL
                     YEVRNGRGPVYIDCRHLKEEDMAHLKTTLGYDKDTLPDYFEQRGEDLAKEPVEVMVSE
                     GMQAGPTEVTGSGVKIDGEGAATIDGLFACGDSADHNRCVHGAITGGYKAGKSAAISA
                     LNERFADAPSKATISEMADRFLAPLYRETGYPYEQIEGTIRKIMAEHVGPMRTEMGLK
                     SGLKKLERLEPSLDEIKVEDKHDLMRANETRNLMSVGKIMINAALYRTESRNKPYHYR
                     LDYPETNDEEWCGLVVVRKNGDNVNCSFEPVVYKSN"
     gene            1303..1590
                     /locus_tag="QF359_09755"
     CDS             1303..1590
                     /locus_tag="QF359_09755"
                     /inference="COORDINATES: protein motif:HMM:NF024585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO87235.1"
                     /translation="MPVIFNLDKCDGCGICDNICPGDVIYMHRPKMMPVEKGSSEMHK
                     INPYRLGFTSYPEKKSPFLPRPQECWHCGSCRQDCPQEAITVVFPPDMLSM"
     gene            complement(1597..2400)
                     /locus_tag="QF359_09760"
     CDS             complement(1597..2400)
                     /locus_tag="QF359_09760"
                     /inference="COORDINATES: protein motif:HMM:NF024118.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJO87236.1"
                     /translation="MHLTLLGTGLPFINPKRRGPAYLVRAGEEHFMVDCGSGAMHRLY
                     EAGAKPSDINHMFITHLHMDHYIDLGHFIMMRWINRNDEPLHLYGPRGLQKMADQLLE
                     MHGPDLELRQITRAKRRPDISIVVHEISEGLMLETPNGVKVSAFSVEHYPLEEPFGFR
                     FDSKDKSIAFSGDTRPCENLIRHCQEVDVLVHEASEYTLWDSPDVDHTHQVKTHTHPE
                     KLGFVARDAKPKLLVASHLMPRSEPWKLREMIGQGFKGNIVIGEDLMTC"
     gene            3004..3135
                     /locus_tag="QF359_09765"
     CDS             3004..3135
                     /locus_tag="QF359_09765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87237.1"
                     /translation="MLGEQIGLQDWLFYEFDLEDRVPAEHFLQKIDAVLYLSWLKSE"
BASE COUNT          952 a          836 c          870 g          857 t
ORIGIN      
        1 caatttcaac ggcaaacttt tgaaaccgaa actgggcgcc gccgtacgtc aatccggctg
       61 caaggtcttt aaccggatca tgacggtcga tctcttgacc aaggaaggtc gcgtggttgg
      121 cgccatgggc ttccagaaca ggacgggcga cgtctttgta ttcaacgcca agaccaccat
      181 catcgccacc ggcaatacca accggcttta cgagaacccg cggcttaatc ccttcaacac
      241 ttggctttgt ccctataata caggcgacgg ccagatgatg tcattcaacg ccggtgcggc
      301 attgaccaat atggaataca tgcgcatgac ggtgttaccc aaaggcttct cggctccggg
      361 cttcaacgcc ctcgtgggga tgggcgggcg ttttatgaac agccttggtg attattacat
      421 ggaagaaaat catccgttgg gcaacaaagc gccccgctac gatgtcgtgt ttaatacgct
      481 ttacgaagtg cgcaatggtc gcggcccggt ttatatcgat tgtcgccacc tcaaagaaga
      541 ggacatggcg catttgaaaa ccactcttgg ctacgacaaa gacacactgc cggattactt
      601 tgagcaacgg ggcgaggatc tggctaaaga gcctgtcgaa gtgatggtat ccgaaggcat
      661 gcaggcgggc ccgaccgaag tcaccggttc cggcgttaag attgacggcg aaggtgcggc
      721 tacaatcgat ggtcttttcg cctgtggcga ttccgccgat cataaccgct gcgtccacgg
      781 tgccatcacc ggtggataca aagcgggtaa gtcggcggcg atatcggctc tcaatgaaag
      841 attcgccgat gcacccagca aagcaaccat cagcgaaatg gctgatcggt tcctggcacc
      901 cctctatcgt gagaccggat acccttacga gcagatcgaa ggcacaatcc gaaaaatcat
      961 ggccgaacat gtagggccca tgcggaccga aatggggctg aaaagcggcc tcaagaaatt
     1021 ggaacggctg gaacccagcc ttgacgagat taaggtcgag gacaaacatg acctgatgcg
     1081 agccaacgaa acccgtaatc ttatgtcggt gggcaaaatc atgatcaacg ccgcgctcta
     1141 ccgtacggaa agccgcaaca agccgtatca ctaccgcctc gactatcccg aaaccaatga
     1201 tgaagaatgg tgtggcctgg tggtagtgcg gaaaaacggt gacaacgtaa actgctcttt
     1261 cgaaccggtc gtctacaaat cgaattagga gaggatcaga ttatgccggt tatattcaac
     1321 cttgataagt gtgacggctg cggcatctgc gataatatct gcccgggcga cgtcatctat
     1381 atgcatcggc caaaaatgat gcctgtagag aaaggttcga gcgagatgca taagattaat
     1441 ccttatcgcc taggtttcac cagctaccca gaaaaaaaat caccgttttt gccaaggcca
     1501 caggaatgtt ggcattgcgg gtcgtgccga caagattgcc cccaggaggc catcactgtc
     1561 gtcttcccgc ccgatatgtt gagtatgtag gatttctcag cacgtcatta gatcttcgcc
     1621 aatgacaata ttacccttga aaccctgccc gatcatctcg cgaagtttcc acggctccga
     1681 gcgcggcatg aggtgagagg ctaccagtaa tttcggctta gcgtcgcggg caacgaatcc
     1741 cagcttttcc gggtgagtat gggttttgac ctgatgggta tgatcgacgt cgggcgaatc
     1801 ccacagggta tattctgaag cctcgtgaac caggacatca acttcctgac aatgcctaat
     1861 gaggttctcg cacggacgcg tatcaccgga aaaggcgatg cttttatcct tactatcgaa
     1921 gcggaagccg aagggttcct ccagcggata atgttctaca ctaaaagcgg acaccttcac
     1981 cccgttgggc gtctccagca tcagtccttc ggaaatttcg tggacgacga tgcttatatc
     2041 cggccgacgc ttagcccggg ttatctggcg aagctcgaga tcgggtccgt gcatttcgag
     2101 caactggtcg gccatttttt gcaggccgcg cggaccatat aggtgcagag gctcatcatt
     2161 gcggttaatc cagcgcatca tgataaaatg gccgaggtca atatagtggt ccatatgtaa
     2221 atgggtaata aacatatggt tgatgtcaga cggcttggcg ccagcttcat agagccggtg
     2281 catagccccg gagccgcaat ccaccatgaa atgttcctca ccggcacgga cgagataagc
     2341 tggaccacga cgtttcggat taataaacgg cagcccggtt cccaacagag taagatgcat
     2401 aaagatctcc cataaggtgt gttggttctt tgggaacatt gaaacacata gaattctggg
     2461 tgtcacgagg tgagaaaggg tgatggatat cattaaacta cccctattta cccttacaaa
     2521 agggatacag aaaactagag gtcgcaggca gagtggatat caaatatcag aaattcacta
     2581 cggtcttcgg tgagctatga aaaggttcaa aaccatctcc tgatttgaac tcaaaaaaat
     2641 tcccggttcc tagaatatta ttccctgtta attctattag ttcccctgtt aaatggcgta
     2701 agaatcttgc ctaaggaatg aggccgagca gggggatcag caatagtaat tcctcaccac
     2761 cagcaggaat tcgagaatat tccctgtatt ttctgtgttt atcagggaaa tttcattgga
     2821 tacaggttca catgagattg cgtccaccgc tatttaacat aaattatttt ggggctgacc
     2881 catctaacac tatttttaag tcgcctgatg tctgctatta gccgaggctg ttaaaaaaca
     2941 ccttattatt tcgttattga agatgtgatt ccatcgtttt gttgatttca ggagggcgga
     3001 gcgatgttgg gcgaacagat tggacttcaa gattggttgt tttatgagtt tgatcttgag
     3061 gaccgggtac cagcagaaca ctttcttcaa aaaattgatg cggttcttta tttaagttgg
     3121 ttaaagtctg agtagcaggc cacaggccat cgggaaaccg cgttggatga attttgtatt
     3181 gacaacatag aacgtttcaa acggcccaag gaatatcgtt ttgtcaaggc actaccaaaa
     3241 aacaattatg gtaaagttct aaaaacaaaa ctcagagata tgctttaaat agccaatgaa
     3301 aataaaaaac ccgctcaaga ttgagcgggt ttctttggaa aatttaaaga ctacatcgca
     3361 ttagcaggaa ttttgactcc aatttcctta tagtacttaa gagctccggg gtgcagtttt
     3421 gtattattct gtgcaaatat atttttctta ttaagagcac ccttagccca actagtcaca
     3481 gaccacattt catcaatgtg ctcccaaaat gattt
//
LOCUS       DASCNL010000736         1726 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001503045, whole genome shotgun sequence.
ACCESSION   DASCNL010000736 DASCNL010000000
VERSION     DASCNL010000736.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001503045"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="QF359_09770"
     CDS             complement(<1..553)
                     /locus_tag="QF359_09770"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJO87238.1"
                     /translation="MKPQNLLYIMSDEHNPKMLGCYGHEQVKTPNLDKLAARGTHFTS
                     HYTNSPICIPARAAFATGRYTHETKYWDNALPYDGEVKGWGHRLQDEGYRVESIGKLH
                     YRHEDLNTGFSKQHHPMHVMDGIGQVWGSIRDPLPDERSAKMLNEIGPGESNYNRYDR
                     LIVDEACSWLQEAATEDNDKPWVL"
     gene            complement(558..>1726)
                     /locus_tag="QF359_09775"
     CDS             complement(558..>1726)
                     /locus_tag="QF359_09775"
                     /inference="COORDINATES: protein motif:HMM:NF014073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO87239.1"
                     /translation="SGDTFSDIVLITCAPFLAILVEKFLDFPEKAALIILSLAFVSAV
                     VGRNVWKGMAAALLGMFFAYIGTGEDGYPRLSLGTDGLAEGLPLISAVLGVLIIGEVF
                     KALEDMWHEMREKSVITNIKMKGDQKLHFSDIRRIFPFISISAGIGTMIGALPGIGST
                     LAATLGYATGRKVYKGDTPFGEGAPEGVAATEAANSAVAGANLIPVLSLGIPGNVSAV
                     FIILATESIGGFNPGPQVFSLVPDQINQEMVYAFGLFTTMIFANGLNWTFGGVFMRSM
                     GVMVRVPKQRLLPIVLLLTLTAIYVQQTSMFAIYITLFFGLLGYLMRKLKISVLPFVI
                     AFILANNLEEAMRQAFAVTGSDPWFLLASPISVVFIALSIVVVVFFARNQKDLG"
BASE COUNT          455 a          432 c          459 g          380 t
ORIGIN      
        1 acagcaccca gggtttatcg ttatcctcag tggcagcctc ttgtaaccag ctgcaggctt
       61 catcgacgat cagtcggtca tagcgattat aattggactc accaggaccg atttcattga
      121 gcattttggc cgaccgttca tccggcagtg gatcacggat tgaaccccag acctggccaa
      181 tgccgtccat gacatgcatg gggtggtgtt gcttggaaaa acccgtgttt aaatcctcat
      241 ggcggtaatg cagcttgccg atcgactcaa cccggtagcc ttcgtcctgc aggcgatgac
      301 cccaaccctt tacttctcca tcatagggca gcgcattgtc ccaatattta gtttcatggg
      361 tatagcggcc tgtggcaaag gcagcgcggg ccggaatgca gattggtgaa ttggtataat
      421 ggctggtaaa gtgggtgccg cgagcagcca gcttgtctag gttcggcgtt ttgacctgtt
      481 catgcccata acatcccagc attttcggat tgtgctcgtc cgacatgatg tagagaagat
      541 tttgtggttt catttagtta acccaaatcc ttctgattgc gggcaaaaaa gacgacaaca
      601 acgatcgaga gcgcgataaa gacaacagag atcggactgg ccaataaaaa ccagggatca
      661 gacccagtga cggcaaatgc ctggcgcatg gcttcttcga gattattagc gaggatgaaa
      721 gcgattacga acggcagtac ggagattttc aacttccgca taagatagcc gagcaggcca
      781 aagaacaacg ttatatagat ggcaaacata gaagtttgct gcacgtatat ggcggtcagg
      841 gtcagcagca aaacgatcgg caataggcgc tgctttggca cccgcaccat cacacccatc
      901 gagcgcataa agacgccgcc aaatgtccag ttgagaccat tggcaaaaat cattgttgtg
      961 aagagaccaa acgcatagac catctcttgg ttaatttggt cgggaaccag actgaaaact
     1021 tgcgggccgg gattaaagcc gccaattgac tcggttgcta ggatgataaa gacggccgag
     1081 acgttgccgg gaatgccaag tgataaaacg ggaataaggt tagctccggc cactgcgcta
     1141 ttggcggctt cagtggcggc aacgccttcg ggcgctcctt caccgaaggg agtgtcacct
     1201 ttatagactt tgcggccggt ggcatagcca agcgttgccg ccagcgttga gccgataccc
     1261 ggaagcgcgc cgatcatggt gccaatgccg gctgaaatac taataaacgg gaagatgcgg
     1321 cggatatcac tgaaatggag tttctgatcg cccttcattt taatatttgt gatgaccgac
     1381 ttttcacgca tctcatgcca catatcttcg agcgccttaa acacttcgcc gatgatcagc
     1441 acgcctaaga cggcgctgat caacggcaga ccttcggcca gaccatcagt gccaagcgat
     1501 agccttgggt agccatcttc gccggtgcca atataagcaa agaacatgcc gagtagggca
     1561 gcggccattc ccttccagac attgcgcccg acgacggcag agacgaaggc tagcgataaa
     1621 ataatcagcg ctgctttttc gggaaaatcg agaaattttt cgaccagaat ggccagaaaa
     1681 ggcgcgcagg tgatgagaac aatgtccgag aatgtatcgc cagaga
//
LOCUS       DASCNL010000737         1018 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001504849, whole genome shotgun sequence.
ACCESSION   DASCNL010000737 DASCNL010000000
VERSION     DASCNL010000737.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001504849"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="QF359_09780"
     CDS             <1..273
                     /locus_tag="QF359_09780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87240.1"
                     /translation="LTAVTDKTAQFKAEFGAELVVFGHGTGLDFQHYLYRLAHIYMAH
                     LIAPRQRLWHKLVVFDKREFLAIRNEIGVMNATEYENTGFFLREDG"
     gene            514..981
                     /locus_tag="QF359_09785"
     CDS             514..981
                     /locus_tag="QF359_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO87241.1"
                     /translation="MTTVSMTVNGKAVSADAQPDTLLSEFIRETLNLTGTHVGCDTSQ
                     CGSCVVLVDGHSAKSCTMLAVQAEGAEVTTVEGLATNGELHPMQKAFHENHALQCGFC
                     TPGMMISAIDLVTKNPDADETAIRKGLEGNICRCTGYHNIVKAVQAAAAEMKG"
BASE COUNT          279 a          236 c          249 g          254 t
ORIGIN      
        1 ttaactgcgg tcaccgacaa gaccgctcaa ttcaaggcag aatttggcgc tgaattagta
       61 gtattcggtc atggcaccgg gctggatttt cagcactatc tgtatcgctt ggcacatatc
      121 tatatggctc acctaattgc cccccgtcag cgcctatggc acaagcttgt agtatttgat
      181 aagagagagt ttctggctat tcgtaacgag ataggagtta tgaatgcgac agaatatgag
      241 aacacggggt tcttcctcag agaagacggt taaagatatc cgccgatcat ttcaaaatgt
      301 tcccacttta cattttgact aaggtctggc tgaaacgctc tcggctatcc tgctattatt
      361 attttattgg ggcgcttttt cttaaactaa ttgtaaaaac ctgttgattt aatttccaaa
      421 ctgcgcacac tattcgccct aggacctgat actaacaacg gccaacaggc ccagatataa
      481 aagggtaaaa ggccgcacaa cttgggaggc atcatgacaa ccgtatcaat gacggtgaac
      541 ggcaaggctg tttcagccga tgcccagccg gacacacttc tttcggaatt tattagagaa
      601 actcttaatt taaccggcac gcatgtcggc tgtgacacca gccaatgcgg ctcttgcgtc
      661 gttttggtag acggtcattc ggctaaaagc tgcaccatgt tggcggttca ggccgaaggc
      721 gctgaggtga cgacagttga gggtctggcg accaacggcg aactccatcc gatgcaaaaa
      781 gcgtttcatg aaaaccatgc tttgcaatgt ggattctgta cgccgggtat gatgatcagt
      841 gcaatcgatc ttgttactaa aaatccagat gccgatgaaa cagcgatccg gaaaggcctt
      901 gaaggtaata tctgccggtg caccggctac cataacattg tcaaagccgt gcaagcggcc
      961 gctgcggaaa tgaaaggata agatcatgcc agatggaaac aacacaggta ttggcgcg
//
LOCUS       DASCNL010000738         1421 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001506020, whole genome shotgun sequence.
ACCESSION   DASCNL010000738 DASCNL010000000
VERSION     DASCNL010000738.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1421)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1421)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001506020"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /gene="era"
                     /locus_tag="QF359_09790"
     CDS             <1..678
                     /gene="era"
                     /locus_tag="QF359_09790"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HJO87242.1"
                     /translation="MVAAAWGGAGDADHVILLVDAQRGLNPDTRAIIDRLKEQDGHTV
                     DLVINKIDLIDKQKLLALTQKLSAEGVFDETYMIAAFNGDGVDDLVAHLTAKMPASPW
                     LFPEDQISDMPMRLLAAEITREKLYLKLHQELPYATTVETETWEEKEDGSVRIEQTIY
                     VESESQRSIILGKGGKMIKSIGVESRHDLGEILDTIVHLFLFVKINEKWGDDPGRYSS
                     WGLDFNA"
     gene            961..>1421
                     /gene="recO"
                     /locus_tag="QF359_09795"
     CDS             961..>1421
                     /gene="recO"
                     /locus_tag="QF359_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HJO87243.1"
                     /translation="MNWSDIGIVLSARKHGEGSAIVSLMTLEHGRHAGLVRGGSGKRA
                     RGIYEAGNLVSVEWRARLEDHLGSFTCELLQPQAALYLDDSFRLSGLSSACAVLEMAL
                     PEREPHPEIYESLFNFIVNLSEDTWLEEYVKWELDLLADLGFGLDLTSCAST"
BASE COUNT          352 a          350 c          360 g          359 t
ORIGIN      
        1 atggtagccg ccgcctgggg cggagccggc gacgccgatc acgttatcct actagtagat
       61 gcccaacggg gccttaaccc agacacccga gccatcattg atcgccttaa ggaacaagat
      121 ggccacaccg tcgatctcgt catcaacaaa attgacctaa ttgataagca gaaactactg
      181 gcgctaacac aaaaactcag tgctgagggt gtgtttgacg aaacctatat gattgcggcg
      241 tttaatggcg acggcgttga cgatctcgtc gctcatctca ccgccaaaat gccggcaagc
      301 ccatggctgt tcccggaaga ccagatctcc gatatgccga tgcgattgct ggcggctgaa
      361 attactcggg aaaaactcta tctcaaactg catcaggaac tgccttacgc cacgacggtt
      421 gagacggaga cctgggaaga aaaggaagat ggatcagtgc gcatcgagca aactatctac
      481 gttgagagtg agtctcaacg ttccatcatt ctcggtaagg gcggcaagat gatcaaatcg
      541 atcggtgttg aaagccgcca tgatcttggt gagattctcg ataccattgt acatctgttc
      601 ctattcgtca aaatcaacga aaagtggggt gatgatcctg gccgctatag ctcctggggc
      661 ttggatttta acgcctgagc gcgttcatag gcttttgagt ttacaggttc tgctgttgcc
      721 cgttagatca ttagaacaaa cgcattcaag agaacaatta tgtagaccga gctgttttat
      781 ctatttttta cttcagtctt actcgccgta atgttgattc caaaaattgt tagacaagtc
      841 tatcattacg gtccgtttca ccctgaggaa taccaaaact tacgaagcga tgggtatcaa
      901 atcgaaaagg atgttgaggg cgggggtgaa attcccaatt ttccagtata aactcacccc
      961 atgaattggt ctgatattgg tattgtttta tccgcccgca aacacgggga gggctcggcg
     1021 attgtctcct tgatgacgct tgagcacggc cgtcacgccg gactggttcg aggcggcagt
     1081 ggcaagcgcg cccgtggcat ctatgaagcc ggtaatctgg tcagtgttga atggcgcgcc
     1141 cgcctcgagg atcatctcgg ctccttcacc tgcgagctgc ttcagcccca ggccgcgctc
     1201 tatctcgatg attcatttag gctgtcaggt ctaagttcag cctgtgctgt actcgaaatg
     1261 gcgctaccgg aacgtgaacc gcatcccgaa atatacgaat cactttttaa ttttattgta
     1321 aatctcagtg aagacacctg gctagaagaa tatgttaaat gggagctcga tctgctggcc
     1381 gacttgggtt tcgggctcga tcttacttcg tgtgcctcga c
//
LOCUS       DASCNL010000739         1288 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001507207, whole genome shotgun sequence.
ACCESSION   DASCNL010000739 DASCNL010000000
VERSION     DASCNL010000739.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1288)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001507207"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            15..1013
                     /locus_tag="QF359_09800"
     CDS             15..1013
                     /locus_tag="QF359_09800"
                     /inference="COORDINATES: protein motif:HMM:NF013098.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJO87244.1"
                     /translation="MKPLLDLPFLAHGHATLKAVDESVRFYRDFLGLDVLKTSKRTLV
                     ARLGSNTAIVGVTIGEKGLAKAARPWLKNAHFGFDMPTADDIKAARELSLEYQESFNI
                     QNVGELVEGDGGFSFILLDQDGNYWEILENPAGGYADLFEGECDTSHALRSFSPSGDD
                     QRNSILKPRLMSHMTCEVINLEKSHAFYKEMFGFEMVQLSPKRLLARLNSVAVIDVIQ
                     TDTGLRDYKMHNHIGFDVAGPAIVDAARKIIIENQERFGFKVIHKPSGSHGSYGFTFS
                     DLDNNAWQIEDYPRGGYYWMFEQGGDLETPFQPNVVGVEDWHELIDPDTYEYHHQV"
     gene            1029..>1288
                     /locus_tag="QF359_09805"
     CDS             1029..>1288
                     /locus_tag="QF359_09805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87245.1"
                     /translation="MKHRSKLVILTAAGALLAASPSMAQTKGGTLTVGMDRPMTGFDS
                     SMNPRPEYNRRNAMLPVYEDLFSRGKDGKLIPVLGKSMKSSP"
BASE COUNT          345 a          297 c          324 g          322 t
ORIGIN      
        1 atgtggctcg ataaatgaaa cctctgttgg atttaccttt tctagcacat ggtcacgcaa
       61 cattaaaagc tgtcgatgaa tcggtgcggt tttatcgcga tttcttgggt ctcgatgttt
      121 taaagaccag caaacgcacg ctggtggccc ggctcggtag caatacggcc atcgtcggcg
      181 ttaccatcgg tgaaaaaggt ctggcaaaag ccgcgcggcc ttggctcaaa aatgcccatt
      241 ttggctttga tatgccaact gccgatgaca tcaaagcggc tcgcgagcta tcgctcgaat
      301 accaagaaag tttcaatatt caaaatgttg gtgagctcgt tgaaggtgac ggcggatttt
      361 cgtttatact gctcgatcag gacggtaatt attgggaaat tctcgaaaat cccgccggag
      421 gttatgctga tttgttcgaa ggcgagtgcg ataccagcca tgcgcttcga tcattttcac
      481 catcgggtga tgaccagcga aactccatct taaaaccgcg cttgatgtct cacatgactt
      541 gcgaagtcat aaatctggaa aaatcccacg ccttttataa agaaatgttc ggctttgaaa
      601 tggttcagct tagcccaaaa cgtctgctgg cccggcttaa tagcgttgcc gtcatcgacg
      661 ttattcaaac cgataccggt ttacgtgatt acaaaatgca caaccatatt ggatttgatg
      721 ttgcgggacc ggcaattgtc gatgcagcgc gaaaaattat aattgaaaat caggagcggt
      781 ttggcttcaa ggtcattcat aaaccaagcg gcagtcacgg cagctacgga tttacatttt
      841 ctgatctcga taataatgct tggcagattg aggattatcc gcgtggcggc tattattgga
      901 tgttcgaaca gggtggagat ttggaaaccc cgtttcagcc aaatgttgtt ggcgtcgagg
      961 attggcacga gcttattgat ccagacacat atgaatatca tcaccaggta taaaatggga
     1021 gaagtagaat gaaacacaga tcaaaactgg taatattaac agcagcgggt gcgctgctcg
     1081 ccgccagccc gtccatggcg caaaccaaag gtggcacctt gacggtcggg atggaccgac
     1141 cgatgaccgg cttcgattca tcaatgaacc ccaggcctga atataaccga cgcaatgcca
     1201 tgctgccggt ctatgaagat ctgtttagcc gcggcaagga cggcaaactg atcccggtcc
     1261 ttggcaaatc gatgaaaagc tccccgga
//
LOCUS       DASCNL010000740         1476 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001510196, whole genome shotgun sequence.
ACCESSION   DASCNL010000740 DASCNL010000000
VERSION     DASCNL010000740.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1476)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001510196"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1214
                     /locus_tag="QF359_09810"
     CDS             <1..1214
                     /locus_tag="QF359_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011252186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJO87246.1"
                     /translation="EALRQAVKLSARYIHDRKLPDKAIDVIDEVGASRMLLPERKRKK
                     TISVKDVETVIAKMARIPPKSVSRDDKKVLANLERDLKTMVFGQDNAIEALSGAIKLA
                     RAGLREPEKPIGNYLFSGPTGVGKTEVARQLARSMGIELVRFDMSEYMERHTVSRLIG
                     APPGYVGFDQGGLLTDAIDQQPHAVLLLDEIEKAHPDLFNILLQIMDYGKLTDNNGKS
                     VDFRNVVLIMTTNAGAIEMAKIAIGFERDDRVGDDEEAIEKMFSPEFRNRLDATVSFA
                     NLSPEIMGKVVDKFVMELEAQLSDRNVTITLTDESREWLTKKGYDKCFGARPLARVIQ
                     EHIKKPLSEQLLFGELIKGGTVQVLVKDNKLDFEYPKLALPKSDDKKGKGKGPGKGDG
                     GAVGKKQELVE"
BASE COUNT          372 a          344 c          400 g          360 t
ORIGIN      
        1 ccgaagcgct acgccaagcc gtaaagttgt ctgcccgtta tattcatgac cgcaaactgc
       61 ccgataaggc gattgatgtc attgatgaag ttggcgcctc acgtatgttg ctgccagaaa
      121 gaaaacgtaa gaaaaccatc tcggtcaaag atgtcgaaac tgtcatcgcc aagatggccc
      181 gcatcccgcc aaaatccgtg tcacgggatg ataagaaggt gctcgccaat ctcgaacgcg
      241 atctcaagac catggtgttt ggtcaggata atgcgattga ggctttgtcg ggcgctatca
      301 agctcgcccg ggcgggtttg cgcgaaccag aaaagccgat cggcaactat ttgttctctg
      361 gtccaaccgg tgtaggtaaa accgaagttg cccgccagct tgcgcgctcg atggggattg
      421 agctggtgcg ctttgatatg tccgaatata tggagcgtca cacggtctca cgtttgattg
      481 gcgcgccgcc tggatatgtt ggcttcgatc aaggtggact gcttaccgat gccattgatc
      541 agcagccgca cgccgtcttg ctgctggatg agatcgagaa agcccatcct gatttgttca
      601 acattctgtt gcagattatg gattacggta agctcaccga taacaacggt aaaagcgtcg
      661 acttccgtaa tgttgttcta attatgacga cgaatgccgg ggcaattgaa atggctaaaa
      721 tcgctatagg ttttgagcgg gatgaccggg tcggcgacga tgaggaagcg attgagaaaa
      781 tgttctcgcc ggaattccgc aatcgtcttg atgcgacagt gtcctttgcc aatctatcgc
      841 cggaaattat gggtaaggtt gtcgataaat ttgtcatgga gttggaagcg cagttgagcg
      901 accgcaatgt caccatcacc ttgaccgacg agtcccgtga atggctgacc aaaaaaggct
      961 atgacaagtg ctttggcgcc cggccgttgg cgcgagttat ccaggagcac atcaagaaac
     1021 cactatctga acaactgctg tttggcgaat tgatcaaagg cggcactgtt caagtgctgg
     1081 ttaaagataa caagctcgat ttcgaatatc ctaaactcgc tttaccgaaa agcgacgata
     1141 aaaagggtaa agggaagggg cctggaaaag gtgacggtgg cgccgtcggt aaaaaacaag
     1201 agctggttga gtagactttc gacttttggt gacagtttac ttttaagtgt aactgtcacc
     1261 gaaattgaaa ttcctagcca ccgggcagtg caaatagctc gtgctctcct ccgaggccct
     1321 ttactgcgtg ttgaccgact tcaattttct agggaaggta tcggcgaagg tcgaggagat
     1381 cagcaccggc tcctgcaatt cttttgtcat actttcgata agtgccgcct tattggctgc
     1441 cgagccgatg acggtaaatt ctcgccgctc atggat
//
LOCUS       DASCNL010000741         1196 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001514302, whole genome shotgun sequence.
ACCESSION   DASCNL010000741 DASCNL010000000
VERSION     DASCNL010000741.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001514302"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1177)
                     /locus_tag="QF359_09815"
     CDS             complement(<1..1177)
                     /locus_tag="QF359_09815"
                     /inference="COORDINATES: protein motif:HMM:NF014795.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HJO87247.1"
                     /translation="MSPKNSNETIWGSDVIASALRETSIPYACLNPGASYRGLHDSLV
                     NFLGNENPKMLLNLHEEHAIAIAQGYAKAFNEPLIAIVHSNVGLMHATMGIFNAWCDR
                     VPMVVIGATGSLDAAIRRPHIDWIHTAADQGGLIRDYIKWDDQPGSPATAVDAIRKGK
                     QIACTPPYGPVYICLDSAVQEMQLDEWPEFNDIGRYQSPPPPSAPAGAVEAAAEMLLG
                     ADNPLILAGRMQRTEVAWEKRVRLVEAIGAKAVNNSWQEVGFPTNHPLHVKNIAGFFV
                     GGPIREAHEAADVVLSLDWFDLGGTLNHAWQGGEVKPKVIHCSMDYHLHGGWSKDHGQ
                     LAPVDLHVPTTPEAFIDELLPIVEEAGNGQSHQVIKPEPVGAQAQGPISILDLAQAVR
                     "
BASE COUNT          269 a          347 c          306 g          274 t
ORIGIN      
        1 agcggacagc ttgggcgaga tcgagaatac tgatcggccc ctgcgcttgt gcccccaccg
       61 gttcaggctt tatcacctga tggctctgcc cattccctgc ttcctcaaca atcggcagca
      121 gctcatcgat aaaggcttca ggtgtcgtcg gtacatgcag atcgaccggc gccagctggc
      181 cgtgatcttt gctccagccg ccatgcagat ggtaatccat cgaacaatga ataacttttg
      241 gtttcacctc gccgccttgc caggcatggt tcagggtgcc gccgagatca aaccagtcca
      301 agctcagcac aacatccgct gcttcatggg cttcccgtat tgggccacca acaaaaaagc
      361 cagcgatatt tttgacatgc agcggatgat tggtcggaaa gccgacttcc tgccaggaat
      421 tgttgacggc cttggcgcca atcgcttcga ccaggcgcac acgtttttcc cacgccactt
      481 ccgtgcgctg cattcggcct gccaagatta agggattgtc ggcgcccagc aacatctcag
      541 ccgccgcttc tacagcccct gcaggcgccg aaggcggtgg tggcgattga tagcgaccaa
      601 tatcattaaa ctcgggccat tcgtcgagct gcatctcctg cacagcggaa tcgaggcaaa
      661 tatagactgg cccatagggt ggcgtgcagg caatctgttt gcctttacgg atggcatcaa
      721 cggcggtcgc gggcgagccc ggttgatcat cccatttgat atagtcgcgg atcagtcctc
      781 cttgatcagc agccgtatgt atccaatcaa tgtgcgggcg gcggattgcc gcatcaagcg
      841 acccagtcgc accaattacc accattggca cccggtcaca ccaagcattg aaaataccca
      901 tggtcgcatg catcagacca acattactgt gaacgatggc aatcagcggc tcgttaaaag
      961 ccttggcata gccttgagcg atggcaattg cgtgttcctc gtggagattg agcagcatct
     1021 tcggattttc attaccgaga aaatttacca aactgtcatg aaggccacgg tagcttgcgc
     1081 ctgggttcag acaagcatag ggaatgctag tttctcgcaa agccgacgca ataacatcac
     1141 tgccccagat tgtttcattg gaattttttg ggctcacgtt agtctccccc gatctg
//
LOCUS       DASCNL010000742         1031 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001518125, whole genome shotgun sequence.
ACCESSION   DASCNL010000742 DASCNL010000000
VERSION     DASCNL010000742.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001518125"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1031
                     /locus_tag="QF359_09820"
     CDS             <1..>1031
                     /locus_tag="QF359_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO87248.1"
                     /translation="IRARILIRSYRVRGHLHAQFDPLGLVGAGYHRELDHKFYGFTED
                     DLDRKIYIDTFTSMAGKETATLGEILEVMRRSYCSSIGVEYMHIQEIEERSWIQEHVE
                     GVDYRTKYSPELRRAIYKDMVEAEGFETYLQVKHTGTKRFGLDGGESLIPFMERILRT
                     AAYVGVEEIVIGMPHRGRLNVLARTLGKPYVAIFSEFEGNSAHPEDVQGSGDVKYHLG
                     ASADREFTEGNMHLSLAANPSHLECVNPVVLGKVRAKQTQRGDEAREKVMGLLMHGDA
                     AFAGQGIVPESLDLSQIKGYRTGGTIHVIVNNQIGFTTNPSSSRSTPYPTDIAKGMQA
                     PIFHVNGDDP"
BASE COUNT          246 a          248 c          279 g          258 t
ORIGIN      
        1 attcgcgccc gtattttgat ccggtcttac cgggtgcgtg gtcacctgca tgctcaattc
       61 gacccgttag gtttggtcgg tgccggctat caccgagagc ttgatcacaa attctacggc
      121 tttactgaag acgatctcga caggaagatt tatattgaca cttttacttc gatggccggg
      181 aaagaaacag cgaccctagg cgaaattctc gaggttatgc gccgatctta ttgcagctct
      241 attggcgtcg aatatatgca tatccaggag attgaagagc gcagctggat acaggaacat
      301 gttgaaggtg ttgattaccg taccaaatat tcgccggaac taaggcgcgc gatttacaaa
      361 gacatggtcg aagccgaagg ctttgaaacc tatctgcagg ttaagcatac cggcaccaaa
      421 cgcttcggct tggatggtgg tgaaagcctg atcccgttca tggaacgtat attgcggaca
      481 gccgcttatg tcggcgtcga ggaaatcgtc attggtatgc ctcatcgggg ccgtttgaac
      541 gtgttggcgc gcaccttggg taaaccgtat gtggcaatat tctctgaatt tgagggcaac
      601 tcagcgcacc cggaagatgt ccagggctca ggcgacgtga agtaccattt gggtgcgtcg
      661 gctgaccggg aatttaccga aggtaatatg catttatcgc tggctgctaa cccatcacat
      721 ttggaatgtg ttaatccggt agtgcttggc aaggttcgcg ctaagcagac ccagcgtggt
      781 gacgaagctc gcgagaaagt catggggctt ttgatgcatg gagatgcggc ctttgctggc
      841 cagggtatcg tgccggaaag tctcgatctc tcacaaatta aaggctaccg taccggtggc
      901 accatccatg tgattgtgaa caatcaaatc ggctttacca ccaatccctc aagctctcgc
      961 tcaacgcctt atccgactga tatcgccaaa ggtatgcagg cgccgatttt tcatgtcaat
     1021 ggtgacgacc c
//
LOCUS       DASCNL010000743         3923 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001519276, whole genome shotgun sequence.
ACCESSION   DASCNL010000743 DASCNL010000000
VERSION     DASCNL010000743.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3923)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3923)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3923
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001519276"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="QF359_09825"
     CDS             <1..304
                     /locus_tag="QF359_09825"
                     /inference="COORDINATES: protein motif:HMM:NF019301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HJO87249.1"
                     /translation="RREDVHEEMRGFGVPMPEIALPIGLAFQWLGSLLVLFDYYAGVG
                     ALILIGFTIVASFIFLRWWKIKDNPFRRVHMVVGIFTNFAVIAALLQIVEMNGLVR"
     gene            437..3400
                     /locus_tag="QF359_09830"
     CDS             437..3400
                     /locus_tag="QF359_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO87250.1"
                     /translation="MTETSSSQKYLGQPIERIEDATLLRGTAAYTDDIPVPVGTLHAA
                     ILRSPHAHAEITSFDVSEAEKRPGVHAVLTGQDIKELTEPFLIVLRVPLDQWSLAVDR
                     VRFVGEAVAVVIAEDRYLAEDALDHIEIKYNPIEAVIKTMDAAQEDAVLVHPAAGTNV
                     VSRRDFSYGEPEKAFAEADWIIENTIDYPRNSQTPLEGFVVVANYLPGEESYDILSNF
                     QGPFTIHPVMSKALRCKGSQLRMRSPAYSGGGFGVKQAIFPYVVLMCVASRKTGRPIK
                     WVEDRLEHLTAAIAAPNRIIEAKAAVMNDGKIIGLHFEQWDDYGAYLRPPMPGPLYRQ
                     HGIMTGAYDVANMSIVNNLVMTNKTPSGMVRGFGGPQIYYGLERLIHTIAVELGLDHF
                     DVIKKNLIPAGSFPYRAAAGALIESGDYQKALEISENEGKLAELKKHRDDMRAQGKLY
                     GIGYAAIVEPAQSNMGYLSTINTVEERRKAGPKGGNVAIATVNIDPLGTVSVTADSLP
                     QGQGHATILAQIVADEMGLTPQDIIVNMERDTQRDPWSIATGNYSSRFSSSTVVSAQM
                     AAKRVRAKLTDIAAQTLNVPAVEIEFAGGQVFAKGNPDNALRFSRVAGTAHWSPGELP
                     TDMAPGITETATWSAPELEPPNEKDQINTSLTYGFVFDICGLEIDRVTGEVRIDKYVT
                     MHDSGNILNPLLADGQVYGAFGWGLGIALSEEFVYSEDGSFLSGTFADYLCPTAPEVP
                     EPQILHMVSPSPLTPLGAKGIGEGNVMSTPVCVANAVSDAIGVRNLQLPLSPSKIMSL
                     IDDDEPAPPERVASVAPVKGDRGLTGSGQAIVPVPPQQVWDTLLDPVKLAAVIPGCRT
                     LDQVAENSYTANISIGVGAVRGRFQTHIQLSDLDPPNSIVLSGGMTGPLGSSSGEGHV
                     TLTATADGTQVDYTYDVNITGKVAAIGGRMLNGTARVLVDQFFKRLIAQIEGRGEPGA
                     SSTGSWWSRLLKILG"
BASE COUNT          956 a         1025 c          982 g          960 t
ORIGIN      
        1 ccgccgggag gatgtgcatg aagaaatgcg gggcttcggc gtgccgatgc cggagatcgc
       61 cctccctata ggcctggcat tccaatggct cggcagctta ctggtgttgt ttgattacta
      121 tgcaggcgtc ggcgcattaa ttttaatcgg cttcacaatc gtcgccagct tcatctttct
      181 gcgctggtgg aaaattaaag acaatccatt ccgccgcgtt catatggtgg ttggaatatt
      241 taccaatttc gctgtgattg ctgctttgtt gcaaatcgtt gagatgaacg gattggtcag
      301 gtaagtttag tgcagactat caaaacttta taactttaag taattaaggc atcaactata
      361 cttattagac caagtaaatc tcccctgcta aagtaacctt caatcaaaac cgatctatca
      421 cgcggaaaca tgctaaatga ccgaaacatc atcgtcccaa aaatacctcg gccagccgat
      481 tgaacggata gaagacgcga ctttgttacg tggaaccgcc gcctacactg atgatatccc
      541 ggttccggtc ggcaccctgc atgccgctat tttacgctca ccccacgccc atgctgaaat
      601 tacgtcgttt gatgtttctg aagccgagaa gcgccccggt gttcatgcgg tactgaccgg
      661 tcaagatatc aaggaactga ccgaaccttt tctgattgtc ctccgtgtgc cactcgatca
      721 atggagcctg gcagttgacc gggtgcgctt tgttggcgaa gcggttgcag tcgttattgc
      781 cgaggaccgc tatctggccg aagacgcgct cgaccatatc gagattaaat ataatcccat
      841 tgaagccgtt attaagacca tggacgccgc ccaagaagac gctgtgctgg tccatcccgc
      901 cgccggcacc aatgtcgttt cacgccgtga tttttcttat ggcgagccgg aaaaagcttt
      961 cgctgaagca gattggatta ttgaaaatac catcgactat ccgcgcaatt cacagacccc
     1021 gctcgaaggt tttgtcgtcg tcgctaatta cctgcccggt gaggagagct acgatattct
     1081 gtcaaacttc caaggaccct tcactatcca tccggtgatg tcaaaagcgc tacgttgcaa
     1141 aggttcacaa ttgcgcatgc gctcgccggc ctattctggc ggtggctttg gcgttaaaca
     1201 ggcgatcttt ccttatgttg tcttaatgtg cgtagcgtcg cgcaaaactg gccgcccgat
     1261 taaatgggtt gaagaccggc ttgaacattt gaccgcggcc atcgctgccc ccaaccggat
     1321 cattgaagcc aaggctgcgg tgatgaatga cggcaagatc atcggtctgc attttgagca
     1381 atgggacgac tacggcgcct atctcaggcc acccatgccg ggaccgctct atcgccagca
     1441 cggtattatg accggcgctt atgacgtggc caatatgagc attgtcaata acctggtgat
     1501 gaccaacaag accccgtccg gcatggtgcg ggggtttggc ggtcctcaga tttattacgg
     1561 gcttgaacga ctgatccata ccatcgccgt tgagctaggt ctggatcatt ttgatgtcat
     1621 caagaaaaat cttattccgg ctggctcctt cccctaccga gcagcagcag gggcattgat
     1681 cgaatccggt gactatcaga aagctctcga aatttcggag aacgagggca aactagcaga
     1741 gctcaaaaaa caccgcgatg atatgcgcgc ccaaggtaag ctctacggca tcggctacgc
     1801 tgccattgtt gaaccggcgc aatccaatat gggctatctc agcaccatta ataccgtcga
     1861 agagcggcgg aaagctggcc ctaaaggcgg caatgtagcg attgccacgg tcaatattga
     1921 tccgctcggc acagttagtg taaccgctga cagtctgcca caaggtcaag gccacgccac
     1981 tattctcgcc caaatcgtcg ccgatgaaat gggcttaacg ccgcaagata tcatcgtcaa
     2041 tatggaacgc gatacccagc gagatccgtg gtcgattgcc accggcaatt attccagtcg
     2101 gttctcgtct tcgaccgtgg tctccgctca aatggcggcc aaacgggtgc gggctaaact
     2161 caccgatatc gccgcgcaga ctttgaacgt gccggcagtt gaaatcgaat ttgccggcgg
     2221 acaggtcttt gccaagggta accctgataa tgccttacgc ttcagccggg tcgcaggcac
     2281 ggcccactgg tcgccgggtg aactgccgac agatatggca cccgggatta ccgagactgc
     2341 cacctggtca gcccctgagt tggaaccgcc caacgagaaa gaccaaatca atacgtcgct
     2401 gacctacggc tttgtttttg atatttgcgg attagaaatt gacagagtta ccggcgaggt
     2461 gcgcatcgat aaatatgtga cgatgcacga ttccggcaat atcttaaatc cgctgctggc
     2521 tgacggtcag gtatatggcg cttttggctg ggggctcggc atcgctttaa gcgaagaatt
     2581 tgtctatagc gaagacggta gttttctctc gggcactttt gccgattatc tgtgcccgac
     2641 ggcgcccgaa gtaccggaac cgcaaattct ccatatggtc agcccgtctc ccttaacccc
     2701 gctgggtgcc aaaggtatcg gtgaaggtaa tgtcatgagc acgccagtct gtgtcgccaa
     2761 tgctgtatcc gatgcaattg gcgttagaaa tttacaactg ccgctgagcc cttccaaaat
     2821 aatgtcgctg attgatgacg acgaaccagc tccgcctgag cgcgtagctt ctgtagctcc
     2881 ggtcaaaggt gaccgaggct tgaccggaag cggacaggca attgtcccgg taccgccgca
     2941 gcaggtctgg gatactttgc tcgacccggt taaattggcc gctgtaattc cgggctgccg
     3001 cacgctcgat caggtcgccg agaatagtta cactgccaac atttcaatcg gtgtcggcgc
     3061 cgtacgcggc cgtttccaga cccatatcca attgagcgat cttgacccgc ccaattccat
     3121 tgttttaagc ggtggcatga ccggaccgct tggctcatcc agcggcgaag gccatgtgac
     3181 gctgaccgca accgctgacg gcactcaggt tgattacact tatgatgtca atattaccgg
     3241 caaagtagcg gcaattggcg gccgcatgct gaacggcacg gcccgggtct tggtcgatca
     3301 gttcttcaaa cgcctgattg cacagatcga aggccgcggt gagcctggcg cgagttccac
     3361 tggttcctgg tggtcccgcc tccttaaaat actggggtaa agtttataag taattgtaaa
     3421 taaacgattt taatatattg tcccccgtca acgcctatga tactagattg tagtatttga
     3481 taagagagag tttctggagg cgggtaagaa gatgaggagg ctgagtgacc agataatcca
     3541 ataatcacag gctgacgcag gaccgtccaa agggaactcc atctgaaaca cgatggggtt
     3601 ttgttattcc ggcccccacc tactaaaact ggaaaccaaa atctaatcta taatatgtag
     3661 aacttcccta actaaatata tcgaacagcc ccccccctcg attccttact gaatgcctgt
     3721 acttaacagg tagatgaaac aaggggtgca aaatctgagt ctattactct tccttaactg
     3781 gaaaaaaaca ttctcgaaaa tgtcgtgttt cttgtgtata gaaattattg attatttcac
     3841 ttaacattag gcccgtgtat ttttttgtat tttatcaccg aataatttca gggtttttta
     3901 aggaacatct accaactcac cta
//
LOCUS       DASCNL010000744         1403 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001524880, whole genome shotgun sequence.
ACCESSION   DASCNL010000744 DASCNL010000000
VERSION     DASCNL010000744.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001524880"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="QF359_09835"
     CDS             <1..718
                     /locus_tag="QF359_09835"
                     /inference="COORDINATES: protein motif:HMM:NF012779.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HJO87251.1"
                     /translation="NYALADVTHLRPIYEKLEAKLVESGRHEWLDEELAKLTDERIYQ
                     FPPREAWRRVKARNPKPRFLAVLREISAWRETEAQTRDLPRNRVLRDEALVEIAHHTP
                     KNVKELTRTRGLGQRLAEGSAGEQLLHAVQAGLDLPNDECPQVPRRPNLPRGLGPVTD
                     LLKVLLKMKCEQQEVAQKLIANGDDIEKIAAYGEHADVPALAGWRRQLFGEDALNLRN
                     SKLALVINGQALELVEIEDN"
     gene            873..>1403
                     /locus_tag="QF359_09840"
     CDS             873..>1403
                     /locus_tag="QF359_09840"
                     /inference="COORDINATES: protein motif:HMM:NF012521.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HJO87252.1"
                     /translation="MKTIFLLRHAKSSWSDPSTDDFERPLNERGKRNAAQIGTYLAEN
                     SILPDVILCSPAARAQETLSLIRPYLPENQTFMVNNELYLASAVTILKFIEQVKETAS
                     SVMIIAHNPGLHELALNLAGRKNIGVSPLLNRVMQKYPTGALALAICETQNWANLTQN
                     PSSLVDFVCPEDLPPVI"
BASE COUNT          393 a          354 c          317 g          339 t
ORIGIN      
        1 taattatgcc cttgccgacg tcactcattt acggcccatt tacgaaaaac ttgaagccaa
       61 actggttgaa agtggccggc atgaatggct cgacgaggag ctggccaagc tcaccgatga
      121 aagaatctat caatttcccc cgcgagaagc ttggcgccgg gtcaaggccc gtaatcccaa
      181 accacgattc ttagctgtgt tgcgtgaaat ttcggcgtgg cgggaaactg aagcccaaac
      241 ccgtgacctg cccagaaacc gtgtgttgcg cgacgaagcc ttggtggaaa tcgcacatca
      301 cacaccaaag aatgtaaagg agctcacccg cacccgtggc ctcggccagc ggttggcgga
      361 aggcagcgcc ggcgagcaat tattgcatgc cgttcaagct ggtctggatt tgccgaatga
      421 tgaatgcccc caagtacccc gccggcctaa tttaccacgc ggtctcggcc cggttacgga
      481 tctcctcaag gttctgctga aaatgaaatg tgagcagcag gaagtcgcgc aaaaacttat
      541 cgctaatggt gatgacatcg aaaaaattgc ggcttacggc gagcatgcgg atgtgccggc
      601 gctggccggc tggcgacgtc agctgtttgg tgaagatgct ctgaatctca ggaatagcaa
      661 acttgctttg gtgattaacg gtcaagcctt ggaactcgtc gagatcgaag acaattaaaa
      721 aaattttacc ttattcacgt ttttcaaatt gcattttaca tcctacaata ttaggcaata
      781 taccagtatc tgagaacaaa cattcatgca aatgacataa atatgtcact ttaccagcta
      841 accatttcaa attgagttaa ttaattcgtt aaatgaaaac aatttttctg ctgcgccacg
      901 caaaatcaag ttggagcgat cccagcacag atgattttga acggccgtta aatgaacgcg
      961 gtaagcggaa tgccgcccaa atcggcacct atttagctga gaattcaatc ctgccagacg
     1021 taattttatg ttctcccgcc gcccgcgccc aagaaacact gtcacttatc cgcccttatc
     1081 tcccggaaaa tcaaacgttt atggtaaata atgagctgta tctcgcttct gccgttacga
     1141 ttttgaaatt tatcgaacaa gttaaagaaa cagccagttc ggtgatgata attgcccata
     1201 atccaggtct tcacgaattg gcgctcaatt tggcagggcg taaaaatatc ggtgtttcac
     1261 cactacttaa tcgggtgatg cagaaatatc ccaccggcgc tctcgcccta gccatctgcg
     1321 agacacaaaa ctgggcaaac ctaactcaaa acccatcatc actagtagat tttgtttgtc
     1381 cggaagacct acctccagtt ata
//
LOCUS       DASCNL010000745         1417 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001527771, whole genome shotgun sequence.
ACCESSION   DASCNL010000745 DASCNL010000000
VERSION     DASCNL010000745.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1417)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001527771"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(230..988)
                     /locus_tag="QF359_09845"
     CDS             complement(230..988)
                     /locus_tag="QF359_09845"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87253.1"
                     /translation="MTPKLEHPLKNYILVTGAYWVFTLTDGALRMLVLLHFFSLGYEA
                     FQIALLFVLYELAGVVTNLIGGWIDSRLGLKVTLYVGLGLQVIVLSALAKFDTAWPVW
                     QAVAFVMGLQALSGVAKDLTKMSAKSAVKLVVAEDEDATLFKWVAILTGSKNTLKGVG
                     FFLGGALLTWLGYEVALYGMAGAVVLSFVAVLLLMAGDLGKAKEKVKFSVILTKSPAI
                     NILSGARFFLFGARDIWFVVGLPLFLASQLNWNM"
     gene            1213..>1417
                     /gene="rpmI"
                     /locus_tag="QF359_09850"
     CDS             1213..>1417
                     /gene="rpmI"
                     /locus_tag="QF359_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003166435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HJO87254.1"
                     /translation="MPKLKTKSSAKKRFRTTATGKVRGNPANKQHFLRRRPQKMKRKT
                     RGTMIMADADARKIKSFMPYNRGK"
BASE COUNT          433 a          356 c          322 g          306 t
ORIGIN      
        1 tatcgcttta ggaagagaca tgcagttttt ccggtaggtt tccggattat attctctcag
       61 ctaatttgaa ctgcatggtg cttgggcatt ttccggattg ccagaaaaaa tcaacgtacc
      121 tgccaacacg gtaatcaccg ttgccgcttc aagtttcccc ggtgcggacg cttaaaaatt
      181 aaaagataac tgcaatttgt ggtcatttgc catggtccag gaattccctt cacatgttcc
      241 aattgagctg gctcgccaga aacaacggca ggccgacgac aaaccagata tcccgggcgc
      301 caaagagaaa gaacctggcg ccggagagaa tattgatcgc tggcgacttg gttaaaatta
      361 ctgagaattt tactttttcc ttggccttac cgagatcacc ggccatcagg agcaaaacag
      421 caacaaacga gagcaccaca gcccctgcca tgccataaag tgctacctca tagccgagcc
      481 aagtgagtaa agcaccgcct aggaaaaaac caacgccttt gagggtgttc tttgacccag
      541 tgagaatagc aacccatttg aaaagggtgg cgtcttcatc ctcggcgaca acgagcttga
      601 ccgcactttt ggcactcatt ttggtgagat ccttggcaac gcctgaaagc gcctgcaaac
      661 ccataacaaa agcgaccgcc tgccaaaccg gccaagcagt atcaaattta gcaagggccg
      721 acaatacaat cacttgtaga cccagcccaa cataaagcgt gactttgagg cctaaccggc
      781 tgtcgatcca gccgccgatc agattggtga caacaccagc caactcatag agcacaaata
      841 acaaggcaat ttgaaacgct tcataaccaa ggctgaaaaa atgcagcagc accaacatac
      901 gcagcgcgcc atcggtcagc gtaaacaccc aataggcacc ggtaaccaga atgtaatttt
      961 tgagcggatg ttcgagttta ggggtcattt aaatatctgt ttagtatgtg aaatccctcg
     1021 aagatatgaa acttttagga cgcgcgagag tgcttaataa ttgcccagaa acacttgcat
     1081 tgccgtcgtt agatcgctat aacccgcgct tcattgagcg gtctggtgga gatcagattt
     1141 ccaggcatac ctagctgctt taaagagaaa acctgattga attaaatcag gacgcaaaaa
     1201 aaggaaaaag aaatgccaaa attgaagact aagtcgagcg ccaaaaagcg ttttcgcacc
     1261 accgctaccg gcaaggtccg gggcaatcca gctaataaac agcatttcct ccgccgccgt
     1321 ccgcaaaaga tgaagcggaa aacacgtggc actatgatca tggctgatgc cgatgccaga
     1381 aagatcaaat cgttcatgcc atataatcgg gggaaat
//
LOCUS       DASCNL010000746         1024 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001529615, whole genome shotgun sequence.
ACCESSION   DASCNL010000746 DASCNL010000000
VERSION     DASCNL010000746.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001529615"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="QF359_09855"
     CDS             <1..537
                     /locus_tag="QF359_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HJO87255.1"
                     /translation="ILPLVVLALGALFVGILSVDYFVGEHTVEFWKNSLFVLDTHKTL
                     ENVHHLPIWVKLLPLVVGIGGIALAYLMYMFAPELPGALEAGFQRTYLFLLNKWYFDE
                     LYDKIFVRPAFYLGRGLWKAGDGLLIDGVGPDGVAAAVKHLARRAAAMQSGYLYHYAL
                     AMLLGVTFFVTWFLVQGA"
     gene            541..>1024
                     /locus_tag="QF359_09860"
     CDS             541..>1024
                     /locus_tag="QF359_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HJO87256.1"
                     /translation="MDNMPWLSIITFAPLVGVFFILLIRDDNKEIVARNARWVALWIS
                     LITFFVSLGIWINFDNSTANFQFVEKTVWMPGLNIAYHMGVDGISMFFVILSTILTVL
                     CIGASWITITDRVKEYMISFLVLETLMVGMFSALDLVLFYIFFEGVLIPMFIIIGVWG
                     G"
BASE COUNT          197 a          230 c          265 g          332 t
ORIGIN      
        1 atcctgcctc tggttgtcct ggcactcggc gcgttgtttg ttggtatcct gtcagtcgac
       61 tatttcgtcg gcgagcatac ggttgaattc tggaaaaatt ccctctttgt gttggatacc
      121 cataaaaccc tcgaaaatgt gcatcattta ccgatttggg ttaagttgct gccgctggtc
      181 gttggtattg gcggcattgc gctcgcctac ctgatgtata tgtttgcccc ggaacttccg
      241 ggtgccttgg aggcaggttt tcagcggact tacctgttcc tgcttaacaa atggtatttc
      301 gacgagcttt acgacaaaat ctttgttagg ccggcgttct atctgggtcg gggtttgtgg
      361 aaggctggcg acggcttgct gatcgatggc gttgggccgg atggagtcgc cgctgcggtt
      421 aaacatttgg cgcgccgtgc tgccgccatg caaagcggtt atctttatca ttatgcatta
      481 gccatgttac ttggagttac ctttttcgtt acctggttcc tggtacaggg agcttaagcg
      541 atggataata tgccctggct ctcaataatc actttcgccc cattggtcgg agtcttcttt
      601 atcttgctga tccgcgatga taataaagag attgttgcca gaaatgcccg ctgggtagcg
      661 ctgtggattt cgcttattac cttctttgtg tcacttggca tttggatcaa tttcgataac
      721 tcgacagcca atttccaatt tgttgaaaaa accgtttgga tgccaggact aaatattgcc
      781 tatcatatgg gtgtcgacgg tatttcaatg ttcttcgtga ttttgtcgac gatattgaca
      841 gtgctctgca tcggcgccag ctggattacc atcaccgacc gcgttaaaga atacatgatc
      901 tccttcctgg tgctggaaac cttgatggtc ggcatgttct cagcccttga tctggtactg
      961 ttctatattt tcttcgaagg cgtgctaatc ccgatgttta ttatcattgg tgtgtggggt
     1021 gggg
//
LOCUS       DASCNL010000747         1396 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001536226, whole genome shotgun sequence.
ACCESSION   DASCNL010000747 DASCNL010000000
VERSION     DASCNL010000747.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1396)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1396)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001536226"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1062
                     /locus_tag="QF359_09865"
     CDS             <1..1062
                     /locus_tag="QF359_09865"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HJO87257.1"
                     /translation="LGLIINVTPASANGYGPVKAPKVNAKRAALGKRLFFDPRLSGDA
                     AISCSTCHIPTKGFADGLELSKAYPGSDGFRNTPTLINTAQRAAWFHDGRLGTNLNDV
                     TRESITETYNMNMDMRLMQERVKQDPIYVKMFKDAGYGEPSNGSVRKAIPEYLKTLTS
                     RGSAFDTGKMSDAAKRGFELFKGKAGCSSCHTGNRFTDDQPHNTGVPNNPEIWKKPLR
                     HMTYVAFGLFMGIENIMNIRRDVGAHVRTHKADGSDIGKFMTPTLRELKQTAPYMHNG
                     MIRTLKGVVEFYNNGGGNDVNKDKRIKPLGLSKEERSNLVAFLESLSGKPLTGAQHVW
                     KEKIDVNYKPIKDWLKQRN"
     gene            1073..>1396
                     /locus_tag="QF359_09870"
     CDS             1073..>1396
                     /locus_tag="QF359_09870"
                     /inference="COORDINATES: protein motif:HMM:NF015131.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HJO87258.1"
                     /translation="MKTMKKVTLTLIVGLALIGLADSAIADKNAPLAALGKPPIPADN
                     PQTAAKAALGKLLFFDPRIGGDASLSCADCHSPTQGWGFADPISRGYPGAIHWRNSQS
                     VVNTAY"
BASE COUNT          371 a          349 c          344 g          332 t
ORIGIN      
        1 ctcggtctta ttattaatgt aacaccggct tcagctaatg ggtatgggcc cgtcaaagcg
       61 ccgaaggtaa acgccaaaag agcagcatta ggcaagcggc tgttttttga tccgcgcctt
      121 tccggtgatg ctgctatcag ctgttcaacc tgtcatattc caacaaaagg atttgccgac
      181 gggcttgagt tgtccaaagc ctatcccggc agcgatggtt ttcgcaacac gccgacactt
      241 attaacacgg cgcagcgagc agcctggttc cacgacggcc gtttaggcac caatttgaac
      301 gatgtcacgc gcgaatcaat caccgaaacc tataacatga atatggatat gcggttgatg
      361 caggaacgcg tcaaacaaga tccgatatat gtgaagatgt ttaaagacgc cggctatggc
      421 gagccctcaa atggttccgt gcgtaaagct attccggaat atttgaagac tttgacctcc
      481 cgaggctccg ctttcgatac cgggaagatg tctgatgctg cgaagcgtgg cttcgaactg
      541 tttaaaggca aggccggctg ctcatcttgt catacgggca atcgttttac cgatgatcag
      601 ccgcacaaca ccggcgtgcc gaacaatcct gagatttgga aaaaaccgtt acgtcatatg
      661 acttatgtgg ctttcggtct ctttatgggc attgaaaata ttatgaatat ccgtcgtgac
      721 gttggcgccc atgtgcgcac ccacaaagcc gatggttcgg atatcggtaa gttcatgacg
      781 ccgaccttgc gggagcttaa acaaaccgca ccttacatgc acaacggcat gatcagaaca
      841 ctgaaaggtg ttgttgagtt ttacaataat ggcggtggta acgacgtcaa taaagacaaa
      901 cggatcaagc ctttgggcct cagtaaagaa gagcggtcca atctggtagc gtttttggaa
      961 tccctatcag ggaaaccact aaccggtgcc cagcatgtct ggaaagaaaa aatcgacgtc
     1021 aattataaac ccatcaaaga ttggctcaag cagcgcaatt aggagccgtg agatgaaaac
     1081 catgaaaaaa gtaactttaa cattaattgt cggattggca ttgatcggcc tcgccgacag
     1141 tgccatagcc gataaaaacg cacctttggc tgccttaggc aagccaccaa tcccggcgga
     1201 caatccgcaa actgctgcca aagccgctct tggcaaatta ctgttcttcg atcctcggat
     1261 tggcggtgat gcttcattat cctgtgccga ttgtcattca ccgacccaag gctggggctt
     1321 tgccgatcca atttcgcgcg gctatccggg tgcgatccat tggcgcaaca gccaatctgt
     1381 cgttaacacg gcgtat
//
LOCUS       DASCNL010000748         1403 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001540694, whole genome shotgun sequence.
ACCESSION   DASCNL010000748 DASCNL010000000
VERSION     DASCNL010000748.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1403)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1403)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001540694"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            131..694
                     /locus_tag="QF359_09875"
     CDS             131..694
                     /locus_tag="QF359_09875"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HJO87259.1"
                     /translation="MRSTNTNNIIGAIIVALWILWVSNQIGNLLIPAYEPVQDAVAST
                     SVAKVPAKKAAEKTVGETAARAEPAQSLPVLLASANADKGKKIAKKCIACHTFKKGGK
                     NKVGPNLFAIIGKDRAGVAKFNYSGAIKKMGGKWGFADMDQFLTKPKAFMPGTKMVFN
                     GLKNAGDRAAIIMYLRSFADAPTALPK"
     gene            716..>1403
                     /gene="hisN"
                     /locus_tag="QF359_09880"
     CDS             716..>1403
                     /gene="hisN"
                     /locus_tag="QF359_09880"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HJO87260.1"
                     /translation="MTVPASYIELAGRLADIAGPIVARYFRSDLAIADKADSSPVTAA
                     DREAEAAIRAVLEAECPDHGILGEEHGAENLEADYVWVLDPIDGTKAFVTGKPLFGTL
                     IALCQNGTPVLGVIDQPILKERWVGAVGHPTTYNGESVSARACGEMSEAWLYATSPAM
                     FKGADKAAFNRLVECVKFPLYGADCYAYGLLASGFTDIVCEATMQPYDYCALVPVVEG
                     AGGKISDWAGQ"
BASE COUNT          344 a          358 c          362 g          339 t
ORIGIN      
        1 atacatttta tccgcgttca tctataccct gatcgcaaat ttcagtaatt tatctgttag
       61 atggttattt ttgggttatt tttaacacca gcaacaacag accatggcgg acttaacaaa
      121 ggatttggcc atgaggagca caaatacaaa taatatcatt ggcgcgatca ttgttgcctt
      181 gtggatactt tgggtcagca atcaaattgg taatctttta attccagcat atgaaccagt
      241 tcaagacgcc gtcgccagta caagtgtcgc caaggtacca gccaagaaag ctgccgagaa
      301 gaccgttgga gagactgccg caagagctga gcctgcacag tccctacccg ttctactggc
      361 ctcggccaat gctgacaaag gtaaaaagat cgccaaaaaa tgcatcgcct gtcacacctt
      421 taagaaaggc ggcaaaaaca aagttggccc gaacttgttt gccattatcg gtaaagaccg
      481 tgccggcgtc gctaaattta attattccgg cgcgattaag aaaatgggcg gcaaatgggg
      541 ctttgctgac atggatcagt ttctgaccaa gccgaaagct tttatgcccg gcacaaaaat
      601 ggtgttcaat ggcttgaaaa atgccggtga tcgcgccgcc atcatcatgt atctccgcag
      661 tttcgctgat gcacctacag cgctgcctaa gtaattgttc caggggcttg cataaatgac
      721 cgtccccgct tcttatattg aactcgctgg acggctagca gatatcgccg gacctatcgt
      781 ggcgcgctat tttcgctctg atttagcaat tgccgataag gctgactcga gcccggtaac
      841 cgccgccgac cgggaggccg aagctgctat tcgcgccgtg cttgaagctg aatgccctga
      901 tcacggcatt cttggtgagg aacatggggc ggaaaatctt gaggccgact atgtttgggt
      961 cttggacccg atcgatggca ccaaagcttt cgttaccggc aaaccactgt tcggcacgct
     1021 catcgcactg tgccaaaatg gcacgccggt tctgggcgtg atcgatcagc cgatcctcaa
     1081 agaacgctgg gtcggggcgg ttggtcaccc aaccacctat aacggtgaat ctgtatcggc
     1141 gcgggcttgt ggcgagatga gcgaagcctg gctctatgcc acctctccgg caatgtttaa
     1201 aggcgcggat aaggcggcat ttaaccgact tgtcgaatgc gttaaatttc cactttacgg
     1261 ggcagattgc tacgcctatg gcctgctcgc ctcaggcttt accgatattg tctgcgaagc
     1321 aaccatgcag ccttatgact attgcgccct ggtgccggtg gttgaaggcg ccggaggaaa
     1381 aatatccgat tgggccggcc agc
//
LOCUS       DASCNL010000749         1260 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001542199, whole genome shotgun sequence.
ACCESSION   DASCNL010000749 DASCNL010000000
VERSION     DASCNL010000749.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001542199"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..585)
                     /locus_tag="QF359_09885"
     CDS             complement(<1..585)
                     /locus_tag="QF359_09885"
                     /inference="COORDINATES: protein motif:HMM:NF014615.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HJO87261.1"
                     /translation="MPHTFQQIIEDKGYVLADGAMGTGLMALGMKRGDVAERWNIDHP
                     DRIASVHDGFIDAGADLILTNSFGGTYIILERHELGDQAEAYNEAAAKQARQSVERAG
                     RPVLIGGSMGPTGQLIKPLGKLTIEEAEEAFTAQAAALAEGGVDYLWIETMSSVDEMT
                     AAMKGAAKTGIPFVATMSFDAKGRTMMGTTPEAAL"
     gene            complement(611..934)
                     /gene="hspQ"
                     /locus_tag="QF359_09890"
     CDS             complement(611..934)
                     /gene="hspQ"
                     /locus_tag="QF359_09890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HJO87262.1"
                     /translation="MLKGKFDIGQVVKHKLFPFRGVIFDVDPEFNNSEEWWLAIPEEA
                     RPSKDQPYYHLFAENEETSYIAYVSEQNLLIDDNREPITHPDVMEVFGDFRNGRYTLR
                     DQKPN"
     gene            1065..>1260
                     /locus_tag="QF359_09895"
     CDS             1065..>1260
                     /locus_tag="QF359_09895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87263.1"
                     /translation="MSGNFGVVLGLDKPNLLALKYCAGEAACSIRAGINAHPIGLYIR
                     VTINGVAMDDVFSVIYFRTQE"
BASE COUNT          313 a          323 c          288 g          336 t
ORIGIN      
        1 tagcgcggct tcaggggttg tgcccatcat ggtccggcct ttagcgtcga aagacatcgt
       61 cgcgacaaag ggaataccgg ttttcgctgc ccctttcatg gccgccgtca tttcatcgac
      121 cgaagacatg gtttcaatcc acagataatc gacaccgcct tctgccaagg cagcggcttg
      181 ggcagtaaag gcctcctccg cttcttcgat ggtaagtttg ccgaggggct ttatcagctg
      241 gcctgtcggc cccatcgagc cgccgatcaa gaccggacgt ccggcccgct caaccgattg
      301 tctagcctgc ttggcagccg cttcgttata ggcttctgcc tgatcaccca attcgtgacg
      361 ttcaagaata atgtaagtgc cgccaaaaga gttggtcaaa atcaaatctg cgccggcgtc
      421 gataaaacca tcatgaaccg aggcaatacg gtccggatga tcaatattcc agcgttcagc
      481 gacgtcgccg cgtttcatac caagcgccat gagaccggtg cccatggcac catcagccag
      541 cacatagcct ttatcttcga taatttgttg gaaagtgtgg ggcattgcta attccgttaa
      601 ttatattcaa ctaattcggt ttttgatctc taagcgtata gcgcccgtta cgaaaatcac
      661 caaaaacttc cataacgtca ggatgggtaa tcggctctct attgtcgtcg attagtaaat
      721 tctgctccga cacataggcg atatagctgg tttcttcatt ctccgcgaac agatgataat
      781 agggctggtc tttagacggg cgggcttctt cgggtatggc aagccaccat tcttcggaat
      841 tgttaaactc cgggtcgaca tcaaaaataa cacctcgaaa tggaaataac ttgtgcttca
      901 ccacctgccc aatatcgaat ttacccttta acaaccttta atcctcagta attgatcagc
      961 actcatgaca ttatgatctt acgccaacta taaaccagaa aatcaaataa ctcacgctga
     1021 gattttgaac ttggttaggg attatccagc agcattgccc aattgtgtct ggtaattttg
     1081 gtgtggtcct aggtttggat aaaccgaact tgcttgctct caaatattgc gcaggtgagg
     1141 cagcctgttc gatacgcgcc ggtatcaatg cccatccgat tggtctgtat atccgggtca
     1201 ctattaatgg agtggccatg gacgacgtat tttccgtgat ttacttcaga actcaagaag
//
LOCUS       DASCNL010000750         1955 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001542605, whole genome shotgun sequence.
ACCESSION   DASCNL010000750 DASCNL010000000
VERSION     DASCNL010000750.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001542605"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="QF359_09900"
     CDS             <1..441
                     /locus_tag="QF359_09900"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJO87264.1"
                     /translation="LTDMLGLISERARHKKLKLNFDCPIDIGWINVDEKNFKQCLLHL
                     LSNAISFSSSGGSITMTAARDNEGVHIDIQDTGIGIPKIDIERVFTGFERGVEADSHK
                     PGAGLGLTLVKAFIELHNGTVSITSKPNQGTTVSFFLPDTRDAD"
     gene            494..976
                     /gene="tsaE"
                     /locus_tag="QF359_09905"
     CDS             494..976
                     /gene="tsaE"
                     /locus_tag="QF359_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HJO87265.1"
                     /translation="MEDIETPFQFSLENEAATAALAAKLAGIAEPGDVIVLIGDLGAG
                     KTSFARAFVTAKGGDGEVPSPTFTLVQLYELADGDVYHFDLYRLEEAEEIFELGIEDA
                     MNDGISLIEWPDRMGAYLPFERLDIVIIIGGQETVRDVELIGRGGDWSERLTKAFPNG
                     "
     gene            969..>1955
                     /locus_tag="QF359_09910"
     CDS             969..>1955
                     /locus_tag="QF359_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HJO87266.1"
                     /translation="MADRAALIEAFLQEAGWAGAKRSLLAGDASFRRYERIEREGERA
                     VLMDAPPPEEDVRPFINITTHLRELELSAPAIFAEDLEAGFLLLEDLGDNTFTLALSA
                     GVDEAVLYQSAVDVLVDLHRRPVVSAIPNDVEPYDEKKLLSEAALLTEWYLPGILGDE
                     ISDLTKNEYLEVWRKVLPKITASGETLVLRDFHADNLMWLPDRDSVARCGLLDYQDAV
                     TGSPAYDVMSLLEDARRDLKPGLAASLLDGYFAALPELDIDAFKQAYVILAAQRHCKV
                     IGIFSRLAMRDGKYDYLVHIPRVWNMLEQACNAPQMAALKDWLDRNIPADKRT"
BASE COUNT          447 a          468 c          552 g          488 t
ORIGIN      
        1 ctaaccgata tgctgggtct gatcagtgag cgggcgcgcc ataaaaaact caaactaaat
       61 tttgactgtc cgattgatat cggctggatc aacgtcgatg aaaaaaattt caaacaatgt
      121 ttgctgcatt tgctcagcaa tgcaatttcg ttttcaagtt cgggtggctc aatcacgatg
      181 accgccgccc gtgacaatga aggtgttcac atcgacatcc aggataccgg gatcggcatt
      241 ccaaagattg atatcgagcg cgtatttacc ggatttgaac ggggggtgga ggctgattcg
      301 cataaaccag gcgccggcct cggtctgacg ctggtaaagg cctttatcga gttgcataat
      361 ggcactgtct cgattacctc aaaacccaat cagggcacca ctgtcagctt ctttctgccg
      421 gatacacgag acgcggatta agacgtggca gaaggctctt ttactctgac accggcctga
      481 gtaaaaataa gtcatggagg acatcgaaac gccttttcaa ttttcgcttg agaacgaggc
      541 ggccacggcg gcactggcgg ccaagcttgc tggcattgcc gaacccggtg acgtgatcgt
      601 actgatcggt gatttgggtg ccggcaagac ctccttcgcc cgcgcttttg taaccgccaa
      661 gggcggtgat ggcgaggtgc cgagcccgac atttacgctc gttcagcttt atgaacttgc
      721 cgatggcgat gtctatcatt ttgatctgta tcgcttggaa gaagccgaag agatttttga
      781 gctcggtatc gaagatgcca tgaatgacgg catttcactg attgagtggc cggatcgcat
      841 gggcgcttat ctgccgtttg agcggctcga tattgttatt atcattggtg gtcaagagac
      901 ggttcgggac gtagaattaa tcggccgagg gggcgactgg tccgaacgat tgacgaaagc
      961 attccccaat ggctgatcgc gctgctttga tcgaggcatt tctgcaagag gcgggttggg
     1021 ctggcgccaa acgcagtctg cttgccggcg atgcatcgtt ccggcgttat gagcggattg
     1081 agcgggaagg cgagcgtgcg gtattgatgg atgcgccgcc gccggaagaa gatgtccgtc
     1141 cttttatcaa tattaccact catctaaggg aacttgagct ttccgccccg gcgatattcg
     1201 ctgaggatct cgaagccgga tttttgttgc tggaagattt gggcgataac acgtttacgc
     1261 tggcgctttc agccggtgtc gacgaagctg tactttacca gagcgccgtc gatgtgctgg
     1321 ttgatctgca tcgccgtcct gtcgtgagtg caataccgaa cgatgttgaa ccttacgatg
     1381 aaaaaaaact actgagcgaa gcagccttgc tgacggagtg gtatctgccg ggcatcctcg
     1441 gcgatgaaat atccgacctc accaaaaatg agtatctgga ggtttggcga aaagtgttgc
     1501 caaaaattac ggcgagtggt gagaccttgg tattacggga ttttcacgcc gacaatctaa
     1561 tgtggctgcc ggatcgtgac agcgttgccc gctgcggctt gctggattat caggatgcgg
     1621 tcactggctc accggcttac gatgtgatgt cgctcttgga ggatgcccgg cgcgatttaa
     1681 aacccggcct ggccgccagc ctgttggatg gatattttgc cgccttgcct gaattagaca
     1741 ttgatgcttt caagcaagct tatgtcatcc tggctgctca gcggcactgt aaggtcattg
     1801 gcattttctc aaggcttgct atgcgggacg gaaaatatga ctatttggtt catattccta
     1861 gggtctggaa catgctggaa caagcctgca acgcgcctca aatggccgct ttaaaagact
     1921 ggttagacag aaacattcca gccgataaac gcacc
//
LOCUS       DASCNL010000751         1342 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001550608, whole genome shotgun sequence.
ACCESSION   DASCNL010000751 DASCNL010000000
VERSION     DASCNL010000751.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1342)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1342)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001550608"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1342)
                     /locus_tag="QF359_09915"
     CDS             complement(<1..>1342)
                     /locus_tag="QF359_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJO87267.1"
                     /translation="ELEPLSKQDILDAIELYKKEGVEAISICFMNAFANPEHEQAAAE
                     IVRQELPDAYLTVSTELLPSIRFYERVSTTALNTYVGPILSHYLGQLKNRLKDIGFGG
                     ILLIMQSNGGVMSPEIAERKPAQTLLSGPAGGPGAGLIYAQAHDQNKCLTVDMGGTSF
                     EASMAVDSPIMVNDGEIDRHRIALPMLGIHTIGAGGGSVGWIDKGGLLRMGPESAGAN
                     PGPVCYQKGGVKPATTDANLVLGYLNPGFFAGGKIELNINAARAAIEEHIAKPLNLSI
                     EKAAAGMYRIACNNMAQGVREITIKRGFDPREFPMIVAGGAGPIHSCLICNELEIPFQ
                     IVPRESSILCAVGMLMGDLKHDFVRTFVSPLKTVDWDKLRGVFDEMSAEGASMLSEEG
                     IEPANQEFHLKFDCRYLKQYHEVSFVMPNDIVEKRDADAVAKAFHAEHNRLYGYS"
BASE COUNT          341 a          354 c          325 g          322 t
ORIGIN      
        1 gaatagccat aaagccggtt gtgttctgca tggaaagctt tagcgaccgc gtcggcatct
       61 cttttttcga cgatatcgtt cggcatgacg aaggaaactt cgtgatattg tttgagataa
      121 cggcaatcga atttgagatg aaattcctga ttagccggct caataccttc ttcagaaagc
      181 atgctggccc cttcagcact catctcatcg aacacgccac ggagtttgtc ccaatcaacg
      241 gtttttaacg gcgagacaaa agtcctgaca aaatcatgtt tgaggtcgcc catcagcata
      301 ccgacggcgc agagtatgga gctttcacgc ggcacaatct ggaacggaat ttcaagctcg
      361 ttacaaatta ggcaagaatg gatcggtccg gcaccaccgg caacaatcat cgggaactcg
      421 cgaggatcga aaccgcgctt gatggtaatc tcacgcacgc cctgcgccat attattgcag
      481 gctatacggt acatacctgc agccgctttt tcaatgctca gattaagtgg cttcgcaata
      541 tgttcttcaa tcgctgcccg agcggcattg atatttagtt cgatcttacc accggcaaaa
      601 aagcccggat tgagatagcc gagcactagg ttggcgtcgg tagtggccgg ctttacgccg
      661 cctttttgat aacacaccgg acccggatta gcgccggcgc tctctggtcc catacggagc
      721 aagccgcctt tatcgatcca gccgaccgaa ccaccaccgg caccgatggt atgtatgccc
      781 agcatcggca gagcaatgcg gtggcgatca atctcaccat cattgaccat gatcgggcta
      841 tcgacagcca ttgaggcttc gaaactggtg ccgcccatat caacggtcag acatttattt
      901 tgatcgtgcg cctgggcgta gatcagaccg gcacccggtc caccggccgg accggacaac
      961 aaagtctgcg ctggcttacg ctcagcgatt tccggtgaca tcacgccgcc atttgattgc
     1021 ataatcagca gaataccgcc aaaaccaata tctttaagcc ggtttttgag ttgaccgaga
     1081 tagtggctta agatcggccc gacataagta ttaagcgcgg tcgttgaaac gcgttcataa
     1141 aaacggattg aaggcagcaa ttcggtagaa acggttaaat aagcatccgg cagttcctgg
     1201 cgaacaattt cagccgccgc ttgttcatgt tcaggattgg caaaagcgtt cataaaacag
     1261 atcgaaatcg cttcgacacc ttcctttttg tacagttcaa tggcatcgag aatgtcttgc
     1321 ttcgatagcg gctctaattc tt
//
LOCUS       DASCNL010000752         1252 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001551883, whole genome shotgun sequence.
ACCESSION   DASCNL010000752 DASCNL010000000
VERSION     DASCNL010000752.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1252)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1252)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1252
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001551883"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="QF359_09920"
     CDS             <1..641
                     /locus_tag="QF359_09920"
                     /inference="COORDINATES: protein motif:HMM:NF012546.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO87268.1"
                     /translation="IHGGYWKVGDKGGYRFPAQAFNPVGVTWITMNYRLAPDVTLDDI
                     VDDVRSAIAWIHHHAADFDSDPDRIIVAGSSAGGHLTGMIAAEGWQNDYGLPENVIKG
                     IAAASGLYDLTPFLHTSQKEYLNLDDASVERNSPAQNLPRHDLPMLITWAGQETSEFI
                     RQSQDYATLCSKTGNAVATLLHPEHNHFSLAREYATTESDLVQGVLKLIEGA"
     gene            complement(656..>1252)
                     /locus_tag="QF359_09925"
     CDS             complement(656..>1252)
                     /locus_tag="QF359_09925"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87269.1"
                     /translation="ILLFYQFPLLTAFILALLGWGKLTPTMVISAFVAFFGLALALAV
                     KFDELDKVGIIYGLISAIVFAIVCSLSNRVMRGQDSLQGTFYICGTATVTMIVISLAV
                     GEFNLPTSTAGWAGFMASHIFYAAAIIGFYKSISMVGAAATSLFSNLEPIVVVGAGYV
                     LLGQLISFWQMVGVAIVVCALIYASRSSSDDTVLEAAE"
BASE COUNT          341 a          345 c          313 g          253 t
ORIGIN      
        1 atattcatgg tggctattgg aaagtcggcg ataaaggagg ctaccgcttt cccgctcaag
       61 cgttcaaccc tgtcggagtt acttggatca cgatgaatta tcggttggcg cccgacgtca
      121 cacttgatga catcgtcgat gatgtgcgct cggcgatcgc ctggattcac catcacgccg
      181 cagattttga cagtgatccg gaccgtatta ttgttgccgg tagttcagcc ggtggtcact
      241 taaccggtat gatagcggcc gaaggctggc agaacgatta cggcctgccg gaaaacgtca
      301 ttaaagggat tgccgcggcc agcggcctct atgatttaac cccttttctt cacaccagcc
      361 aaaaggagta tctgaacctt gatgacgcga gtgttgagcg caacagcccg gcacaaaatt
      421 taccgcgcca tgatttgccc atgctgatta cctgggcggg ccaggaaacg tctgagttta
      481 tacgtcaatc gcaggactac gccacgctct gcagcaagac aggcaatgcc gttgcaacac
      541 tcctccaccc cgagcacaac catttctccc tcgcccggga atatgccact acggaaagtg
      601 acctggtaca gggagtgctg aaacttattg agggagccta gggcttgctt gcgccctatt
      661 ctgccgcctc taatacagtg tcatcactgc tggatcggct ggcgtaaata agcgcgcaga
      721 ccacgatcgc cacgcccacc atctgccaga acgatattaa ttgaccgagc aagacatatc
      781 cggcgccgac aacaacaatc ggttctaaat ttgagaacaa agacgtcgcc gcggcgccaa
      841 ccatcgaaat tgatttataa aacccgatga tggcggcggc gtagaaaatg tgagacgcca
      901 tgaagccagc ccagcccgca gtgctcgttg gcagattaaa ctcgccgaca gcaagagaga
      961 taacgatcat cgtaacggtt gctgtgccgc aaatatagaa ggttccctgg agcgaatcct
     1021 ggccgcgcat aacccgattg ctgagcgaac aaacaatggc aaacacaatt gctgaaatca
     1081 ggccataaat tatgccaact ttatccaact catcgaattt gaccgccagc gccagggcca
     1141 aaccaaaaaa agcaacaaaa gcgctgatca ccatggtcgg cgttagcttc ccccagccca
     1201 gtaaagccaa aatgaaggcg gtcaagagcg gaaactgata aaacagcagg at
//
LOCUS       DASCNL010000753         1325 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001552180, whole genome shotgun sequence.
ACCESSION   DASCNL010000753 DASCNL010000000
VERSION     DASCNL010000753.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1325)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1325)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1325
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001552180"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(64..>1325)
                     /locus_tag="QF359_09930"
     CDS             complement(64..>1325)
                     /locus_tag="QF359_09930"
                     /inference="COORDINATES: protein motif:HMM:NF021351.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Gldg family protein"
                     /protein_id="HJO87270.1"
                     /translation="TKKIGDDIDVLLMVHPKILEDDLMYAVDQFVMRGGRLLVFLDPQ
                     NETARMTPQAPPGAGSSELKKLFDVWGIDYDEDKFVGDRTRAIRVQAPVNGKDVIADY
                     LSWGIYDKRALNDDDVVTGQLTAISLASAGTLALKNDASVKMTPLLQTSKISQRIDAK
                     LVRGQINPEAILKQFKSENKSFTIAARFSGKVKSAFPDGPPKPKKDAKKKAKESDGDK
                     KPVKLAPHLGESKTDLNMIVMADSDLLTSRFWLQQQDFFGQKISSPVSNNADFLVNSL
                     ENLGGSQALISLRSRGLSLRPFHTIQDIKNAAEDKYRQTEQQLSGKLKELQGKLQGLN
                     VEGKGKGKIILTSAQQKAFKQFRAEMLSVRKQLRDVQLALRKDIEKLDTQLKILNIWT
                     IPVVIAIIALVMMVIRRQRYKQQIAQG"
BASE COUNT          322 a          332 c          294 g          377 t
ORIGIN      
        1 aatagccgta atgatcgtaa atccgatgaa tgttttggga ttcataactc tctttactcc
       61 atattagccc tgggcgattt gctgtttata acgctggcgg cgaatgacca tcataaccag
      121 cgcaataatg gcaatcacaa ccggtatggt ccaaatgttg agaattttga gctgggtatc
      181 caatttctca atatcttttc taagcgctaa ctgaacgtca cgcaattgct tgcgcaccga
      241 cagcatctct gcgcggaact gcttgaacgc tttttgctga gccgaggtta aaataatttt
      301 tcccttaccc ttcccttcga cattgagacc ctgcaacttg ccctgcagct ctttaagctt
      361 gccggacaat tgctgttcgg tctggcgata tttatcttcc gccgcattct taatgtcttg
      421 aattgtgtgg aacggccgca aggaaagacc acggctacgc agcgatatca gcgcctgact
      481 gccaccgaga ttttccaacg agttaaccag gaaatcagca ttgttggata ccggagagga
      541 gattttctga ccgaagaaat cctgttgctg cagccagaac cgtgacgtca gtaaatcgct
      601 atccgccatt acaatcatgt tcaaatcagt tttggattcg cctagatgcg gcgccagttt
      661 aaccggcttt ttatctccat cactttcctt ggcctttttc ttcgcatctt ttttcggttt
      721 cggcggcccg tccgggaaag cagactttac tttgccgcta aaccgcgcgg cgatggtaaa
      781 gcttttattc tcggacttaa actgtttgag aatagcttcc gggttaattt gacccctaac
      841 caatttggca tcgatacgct gcgaaatttt gctggtttgt aaaagtggag tcattttaac
      901 gctggcgtca tttttgagcg ccaatgttcc tgcactcgcc aaagaaattg ccgttaattg
      961 accggtgaca acatcatcat cattcaaagc gcgtttgtca tagatgcccc aggagagata
     1021 gtccgcgatt acatctttac cgttaaccgg cgcctggacg cgtatggccc gagtgcggtc
     1081 gccgacgaat ttatcttcat cgtagtcgat accccataca tcaaagagct ttttgagctc
     1141 ggatgagcca gctccaggag gtgcctgtgg tgtcatccgt gccgtttcgt tctgcggatc
     1201 gaggaaaacc aaaagacgac caccgcgcat aacaaattga tcaaccgcat acatcagatc
     1261 atcttcgaga atttttggat gcaccattaa aagcacatcg atatcgtcac cgattttctt
     1321 agtgg
//
LOCUS       DASCNL010000754         1539 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001552537, whole genome shotgun sequence.
ACCESSION   DASCNL010000754 DASCNL010000000
VERSION     DASCNL010000754.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001552537"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="QF359_09935"
     CDS             complement(<1..255)
                     /locus_tag="QF359_09935"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJO87271.1"
                     /translation="MSLNPGCPLDGIRVIGLEQYMAGPYCSMLLADAGAEVIKIERLK
                     YGDPRRSMPPFVEKDGVKKTAGYMGYNRNKKSLALDLSKPE"
     gene            complement(252..1508)
                     /locus_tag="QF359_09940"
     CDS             complement(252..1508)
                     /locus_tag="QF359_09940"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HJO87272.1"
                     /translation="MTEAVIIDGVRTPIGKMGGTLASVRPDDLLAETYKALIERTGID
                     PALLTEVYAGCGNQGGEDNRDVARMSVLLAGLPKEVPGTTVNRNCSSALEAVNLAAKT
                     ILVGEGDLAIGSGVECMSRAPWAMMKPERLPTTSPPKMCDTTVGWRFNNVKMDEMYPI
                     VSLGEGAEIIAEEMQISRNDQDAYSLESHSRAIAAINDGKFKDEIIEISVPQHRGDPV
                     VVDTDEHPRYEKSNGRYEMAIDTESLAKLHSAFKKDGTVTAGNSSGINDGAAALLLAN
                     QDKAGELGLKPLLRWVGSASAGTDPSHFAYGPVPATEKLLERFNLTIDDIGLIELNEA
                     FASQTLGCMRQLGLDPAKTNVNGGAIALGHPTGCSGSRILVTLMHEMKRRAPDMPKAK
                     PFYGLATLCVGVGMGSATLVEWIGDN"
BASE COUNT          327 a          454 c          406 g          352 t
ORIGIN      
        1 ttcgggtttg gagagatcaa gggcaaggct tttcttattg cggttatagc ccatatagcc
       61 ggcggttttt ttgaccccgt ctttttcaac gaatggcggc atcgaacgcc gggggtcgcc
      121 gtattttagc cgctcgatct tgatcacttc ggcgccggca tcggccagca acatggagca
      181 ataaggcccg gccatatact gctcgaggcc gatgacacga atgccgtcta gtgggcaccc
      241 aggattgaga ctcaattatc gccgatccac tcaaccaatg tggcggatcc catgccgaca
      301 ccgacacaca atgtggcgag cccataaaac ggcttggctt tcggcatgtc aggagcgcgg
      361 cgcttcattt catgcatcag tgtcaccaag attcgcgagc ctgagcaacc ggttggatgg
      421 ccgagcgcaa tcgccccacc attgacgttg gtcttggcag ggtcaaggcc aagctgacgc
      481 atacaaccaa gggtctggga ggcgaaggct tcgttaagct caatcaagcc aatgtcatca
      541 atcgtaagat taaagcgctc gagcagtttc tcggtcgccg gcaccgggcc ataggcgaaa
      601 tggctggggt cggtaccggc actagctgag ccgacccaac gcagcagcgg cttcaagccc
      661 agttccccgg ccttgtcctg gttggccagc aacaacgccg ccgcaccatc attaatgccc
      721 gacgaattgc ccgctgtcac cgtaccgtct ttcttaaagg ccgagtgcag cttggcgaga
      781 ctctcggtat cgatggccat ttcataccta ccgttggatt tttcgtagcg cggatgctca
      841 tcggtatcga ccacaaccgg atcaccgcgg tgctgtggca ccgagatctc aataatttca
      901 tccttgaact taccatcatt aatcgccgcg atagcgcggc tatggctttc cagggaataa
      961 gcatcctgat cattgcggct tatctgcatt tcctcggcaa tgatctcagc tccttcgcca
     1021 aggctgacaa tcggatacat ctcatccatt ttcacgttgt tgaagcgcca gcccaccgtg
     1081 gtatcacaca ttttaggcgg gctggtggtc ggcaagcgtt ccggcttcat catcgcccag
     1141 ggagctcggc tcatgcattc aacaccggag ccaatagcca gatcaccctc tccgaccagg
     1201 atcgttttgg ccgctagatt gaccgcctct aaagccgaag agcaattacg attgaccgtg
     1261 gtgcccggca cttctttggg caggcccgcc agcaataccg acatgcgggc aacgtcgcga
     1321 ttgtcctcac cgccttggtt accacagccg gcgtaaactt cggtcagtag cgccggatcg
     1381 ataccggtgc gctcaatcaa cgctttgtaa gtttcggcga gcagatcatc gggccgcaca
     1441 ctggcgagtg tgccacccat ttttccgatt ggcgtacgca cgccatcaat gattacggct
     1501 tcggtcatgg taaattcctc cggtgccggt gttatttat
//
LOCUS       DASCNL010000755         1564 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001553725, whole genome shotgun sequence.
ACCESSION   DASCNL010000755 DASCNL010000000
VERSION     DASCNL010000755.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001553725"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..634)
                     /locus_tag="QF359_09945"
     CDS             complement(<1..634)
                     /locus_tag="QF359_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87273.1"
                     /translation="MRKIFPGPSLVALLLLVPTLGACVKQQLNQFPQDRQGANAAQPQ
                     LAQNPLPQGKQLVSQQGTITAPPPNPEATLGPVVVPKPNEIDSPQNQSEDPSLAPLNE
                     KRFTAPPALPLNPGVPRVAILLPLSGKHAKLGQVMLNAAQMALFHFAGKQFELLPQDT
                     QGMPIGAADAAALAIGDGASLILGPLFAGSVEAIAPAARAAGIKVIAFSND"
     gene            610..1548
                     /gene="rsmI"
                     /locus_tag="QF359_09950"
     CDS             610..1548
                     /gene="rsmI"
                     /locus_tag="QF359_09950"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HJO87274.1"
                     /translation="MDQEKFSAKKSARRSSAKTNEGSKRSKPSAGSQKNLLKAGLYLV
                     ATPIGNLQDLSLRGIEILQNVDVIACEDTRVTGKMLSRHAIDTAMKAYHEHNAKRARP
                     GLLRIIKAGGAVALVSDAGTPAISDPGFRLVNECILQGLEITAAPGANAAITGLILSG
                     LPTDRFLFAGFLPAKSKQRTQELAGLAEVPATLIFYESAKRLAAALADMAEQLGDRPA
                     AVTRELTKLHEEIRRGSLSELSNHYQETGAPKGEIVIVIGPPLKKAALTEAKLDELIR
                     QALPDNSVRDVAAELARETGVAKRQIYARALELAKK"
BASE COUNT          380 a          424 c          429 g          331 t
ORIGIN      
        1 ggtcattgga aaaagcgatg acttttatcc cggcagcgcg tgctgccggt gcaatcgcct
       61 cgacggaacc ggcaaaaagc gggcccaata taagcgaagc accatcacca atcgccagtg
      121 ctgccgcatc ggcggcacca atgggcatgc cttgggtatc ttgcggtagt aattcaaact
      181 gtttaccggc aaaatgaaac agcgccattt gcgcagcgtt cagcattacc tggccaagtt
      241 tagcatgctt gccggagagc ggcagcagga tcgcaacccg cggtacgccg gggtttaacg
      301 gcagggcagg gggtgcggta aagcgttttt cattaagtgg cgcgaggctt ggatcctctg
      361 attgattctg gggcgagtca atttcatttg gcttcggcac aaccaccggg cccaacgttg
      421 cctccggatt aggcggcggc gcggtaatgg ttccctgctg gctgaccaat tgtttaccct
      481 gcggcagcgg gttctgcgcc aattgcggtt gggcggcatt agccccttgc ctatcttgcg
      541 ggaattggtt caactgttgc ttgacacagg cacccaaagt gggcaccagc agcaataggg
      601 caaccagtga tggaccagga aaaattttcc gcaaaaaaat ctgccagacg ttcatctgct
      661 aaaactaacg aaggctccaa gagaagtaaa ccaagtgctg ggtcacaaaa gaatttgctt
      721 aaagccgggc tgtatctcgt cgccacaccg atcggaaatt tgcaagattt aagcctgcgc
      781 ggcattgaaa tactgcaaaa tgttgatgtt atcgcctgcg aagatacgcg agtgaccgga
      841 aaaatgctct ctcgtcatgc catagacact gctatgaaag cctatcacga acataacgcc
      901 aaacgggcac gcccgggttt gctgcgtata atcaaagcgg gtggagcagt cgctctggtt
      961 tccgatgccg gtacgccggc aatttccgat cccggcttta ggctggtcaa tgagtgcatc
     1021 ctccagggat tagaaattac cgcggcgccc ggcgctaatg ctgcgataac cggtcttatt
     1081 ctgtccggcc tgccgaccga ccggttttta tttgccggct ttttgccagc caaatccaaa
     1141 cagcgcacgc aagagcttgc aggacttgcc gaagttccgg ccactttgat tttttacgaa
     1201 tcagccaaac gactggcggc agcgcttgcc gatatggcgg aacaactagg cgaccgcccc
     1261 gctgcggtaa cccgcgagct caccaaactt catgaggaaa ttcgccgggg gtcgttgtct
     1321 gagcttagca accattatca ggaaaccggt gcccccaaag gcgagattgt catcgttatt
     1381 ggcccgccgc taaaaaaagc cgccttaact gaagccaagc ttgatgaact gatccgccag
     1441 gcattgcccg ataattcagt gcgtgacgtt gccgccgaac tagcccggga aaccggcgtg
     1501 gcgaagcgcc aaatatatgc ccgcgcactg gagctggcaa aaaaatgacc gccaaattaa
     1561 gagt
//
LOCUS       DASCNL010000756         1471 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001554236, whole genome shotgun sequence.
ACCESSION   DASCNL010000756 DASCNL010000000
VERSION     DASCNL010000756.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1471)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1471)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001554236"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="QF359_09955"
     CDS             <1..498
                     /locus_tag="QF359_09955"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HJO87275.1"
                     /translation="HFAMSIALEENGEITAGVIYEPINEQMFWAEKGQGAFLNDRRMR
                     VSGRSLMNQSIFATGIPFLGRDGHEPFLKEIEAVMAVSAGIRRFGSAALDLAYVAAGR
                     FDGFWETGLQPWDIAAGIVIVREAGGMVTELDGRDRMLESGSILAVNPNLYQELGQIL
                     KKAGK"
     gene            703..>1471
                     /locus_tag="QF359_09960"
     CDS             703..>1471
                     /locus_tag="QF359_09960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87276.1"
                     /translation="MSRQKLSASRITIVILAAIALFSLISSAKAQLRSWDATNQVMVD
                     LSVLGDNGVGPAPAGGAVMLPSLTGDLLDPPARTPRSRLLVKRPPAGTASSVQDLPKV
                     TLRRPGKTSKKRLTVSRKSKKPRSRTSKVATIKAPPPKPSVKTSKPATKLAPAPKVRP
                     KPKVVTKVEPPPVVAKAAPPPPPKVKAPAPKPKQTQTASRPNSTPATGTNQLIFTQGA
                     TKLSPAAQKSLDALATKLNALPQSRMQLLAYAGEGNLS"
BASE COUNT          385 a          406 c          352 g          328 t
ORIGIN      
        1 cattttgcca tgtctatcgc gctcgaagaa aatggcgaga ttaccgccgg ggttatttat
       61 gaaccgatca acgaacaaat gttctgggcg gaaaaaggcc aaggcgcttt tctcaacgac
      121 cggcgcatgc gcgtctccgg ccgctcgctg atgaatcaat ctatttttgc caccggcatt
      181 ccgtttttgg gccgggatgg tcatgagccc ttcctcaaag aaattgaagc agtgatggcg
      241 gtttctgccg gcattcgccg ttttggcagt gccgcattag atttggctta cgtcgccgcc
      301 ggaaggtttg acggcttttg ggaaaccggt cttcaaccct gggatatagc cgccggcatt
      361 gtaatagtgc gggaagcggg cggcatggta accgaattgg atggccgcga ccgcatgctt
      421 gaaagcggct cgattctcgc ggttaatcca aatttgtatc aagaactcgg ccaaattctc
      481 aaaaaagctg gaaaatagta gttaattctt cactatttcg gccatatttt cgacacaata
      541 ttttattaca gactaacccg caggcgcgat ggtatagcct gttgtaactc cttcgacgct
      601 tgggtatgtt gaagcaacta agggagttgt ttcgaagata ctgcttttta agacgttctc
      661 aaggtgaata tgcgcaaatt tatatgaagg gggaaactca ttatgtcgcg ccagaaatta
      721 tcggccagcc gtatcaccat tgtgatcctt gccgccattg cattatttag cctcattagc
      781 tctgccaagg ctcagctgcg atcgtgggac gccaccaacc aagtcatggt tgatttaagt
      841 gtcctcggcg ataacggcgt tggcccggct cctgccggcg gtgcagtaat gctgccaagc
      901 ctgaccggcg atttgcttga tccaccagcg cgcacgccgc gatctcgttt actggtcaaa
      961 cgcccacccg ccggcactgc cagttcagtg caggatttgc cgaaagtcac cctaagacgt
     1021 cccggtaaaa cttccaaaaa acgtctcacc gtaagccgca agtcgaagaa gccacgctca
     1081 cggacatcaa aagtggccac cataaaagca ccgccaccca aaccaagtgt taaaacttca
     1141 aaaccggcga caaaattagc accggcgcca aaagtccggc ctaaaccaaa ggtcgttact
     1201 aaagtagaac ctccaccggt cgtcgctaaa gccgcaccac caccgccacc aaaagtcaaa
     1261 gcgccggccc cgaagccgaa acaaactcaa acagcgtcaa ggcccaactc aacaccagcg
     1321 actggcacca accagttaat ttttacccaa ggtgcaacca agcttagtcc ggcagcacaa
     1381 aaatccttag atgccctggc aacaaaactt aacgctctac cgcaatcccg gatgcaattg
     1441 ttggcctatg ccggagaagg taatctttcg g
//
LOCUS       DASCNL010000757         1176 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001556099, whole genome shotgun sequence.
ACCESSION   DASCNL010000757 DASCNL010000000
VERSION     DASCNL010000757.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1176)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001556099"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(175..516)
                     /locus_tag="QF359_09965"
     CDS             complement(175..516)
                     /locus_tag="QF359_09965"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HJO87277.1"
                     /translation="MFAVIFEVEPKPEGKAEYLDIAAALRQELEKIDGFISIERFQSL
                     TNDGKMLSLSFWRDEAAITAWRGQTKHQRAQDKGYNDLFNDYRLRVAEVVRDYTKSNR
                     EEAPQDVPARK"
     gene            634..>1176
                     /locus_tag="QF359_09970"
     CDS             634..>1176
                     /locus_tag="QF359_09970"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87278.1"
                     /translation="MSTNNNFDLETGEDQATWQRLFSGDLLIYTLIINLGILLFAVDT
                     FIITTIMPTVIKDIGGTELYSWPVMIYMVGAIAGAASAGPAREILGRRNGYVIAGLLF
                     LIGNLGAAYAPNIEILIAWRLLQGLGGGLIISQSYGLIGDIYPPELRTRILSIISTTW
                     GVATVFGPAFGGIFAEFGSWR"
BASE COUNT          290 a          274 c          270 g          342 t
ORIGIN      
        1 caaaaaagtt atgccgagat cgacggcgtg attaagggta ttgagcgact cggcatcatc
       61 gaccgggcca aaaaaatcag tcaaaacatt accgccaaaa ccaagcgccg aaatttcaat
      121 gtcagaattg ccgagtttct gatatctcat tattatagtt ccccaattac tattttattt
      181 tcttgccggc acatcctgcg gcgcttcttc tcgattgctc ttggtataat ctctcaccac
      241 ttcggcaacc cgcagccggt aatcattaaa taaatcattg tagcccttgt cttgagcgcg
      301 ctggtgtttg gtttgcccac gccatgctgt aatcgctgct tcatcacgcc agaaagagag
      361 cgatagcatt ttgccatcat tggttagact ttgaaaacgc tcaatagata taaagccatc
      421 tattttctca agctcctggc gcagagctgc agcgatatcg agatattccg ctttaccttc
      481 tggtttaggt tcaacttcaa aaataacagc aaacatttca ccccctaaaa tccgaatagt
      541 tcaaccggat tgttgacaaa tatttctgca ggatcacatg caggtcaaaa atcgaaggtt
      601 gcttttcaat aaattaccgc ggcaatattc tccatgtcca caaataacaa ttttgatctt
      661 gaaaccggcg aagatcaggc aacctggcag cggctgttta gcggggattt gctaatctat
      721 acgttgatca tcaatctcgg tattttgctg tttgcagttg ataccttcat catcaccact
      781 attatgccga cggtgatcaa ggatatcggt ggtacggaac tctattcgtg gccggtgatg
      841 atttacatgg tgggtgcgat agctggtgcc gccagtgctg gtccagcgcg cgaaatactt
      901 ggccggcgta atggttatgt tattgccggg ctgttgttct tgattggtaa tctcggcgcg
      961 gcttatgcac cgaatatcga aattctaatt gcctggcgct tattgcaagg attgggcggc
     1021 ggtctcatca tctcgcaatc ttatggcttg atcggtgaca tctatccgcc ggaactgcgg
     1081 actagaattc tatcgattat ttcaacgacc tggggagtgg caacggtatt tggcccggct
     1141 tttggtggca tatttgccga gtttggatcg tggcgc
//
LOCUS       DASCNL010000758         2733 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001557580, whole genome shotgun sequence.
ACCESSION   DASCNL010000758 DASCNL010000000
VERSION     DASCNL010000758.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001557580"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="QF359_09975"
     CDS             <1..212
                     /locus_tag="QF359_09975"
                     /inference="COORDINATES: protein motif:HMM:NF024855.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4115 domain-containing protein"
                     /protein_id="HJO87279.1"
                     /translation="QLLITRLLKKGDSYNVPNRTGLSLITANAGALEILVDGTAVPSI
                     GPIGAVRRNILLEAEKLIDGSAIIE"
     gene            354..1598
                     /gene="hisS"
                     /locus_tag="QF359_09980"
     CDS             354..1598
                     /gene="hisS"
                     /locus_tag="QF359_09980"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HJO87280.1"
                     /translation="MTSLNPVRGTQDILPEEGRLYRRVEETAFEVAERYGFGEITTPI
                     FEFTEVFSRTLGDTSDIVTKEMYTFEDKGGDQITLRPEGTAGVARAFISNGLQQNLPL
                     KLFYRGPMFRYERPQKGRRRQFRQVGVEILGVATPQADIETISIAQTFLEELGLKDYI
                     KLELNSLGDTDSRSAYCDELVKYLSDHQDKLSKDSLERLDRNPMRILDSKDEGDQAVV
                     VDAPRLQDNLNEASQSFFEDLCEGLTKLGIVFEHNTNLVRGLDYYCHTAFEFKTSDLG
                     AQGTVLAGGRYDGLVGQMGGPETPGIGWAAGVERLSLLLDDGAEAKRPIAVIPVGGKA
                     ESEAMVVTEMLRKKGYRVDLGYSGNLKKRMKRANRLNAVAAVLLGEDELTRNVGTLRN
                     MDSGEQKEVSLETLEDHLALYK"
     gene            1618..>2733
                     /gene="hemA"
                     /locus_tag="QF359_09985"
     CDS             1618..>2733
                     /gene="hemA"
                     /locus_tag="QF359_09985"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:TIGR01035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HJO87281.1"
                     /translation="MIDQKIKPDQLEGSLVIVGANHRSSTMLLRDRLFISETVLPSFY
                     NRLRDAGFNEAIIFSTIDITEIVIAAPSNSPATTAEEVVKLLAAHAGESRSEIESQIY
                     TLSGREAIKHLFAVAAALDSLVIGDTQLLGQLRSAHRHAHTNNMTGAYLNNLVASSQK
                     AAERICFETEIDQRPVSIAAAAVQVARDLHGDLAHSTGLLIGAGEMGEMLASSMRSAG
                     LGNLIVTHPSDQRADILGHHLNCHIGAFADLAQLLTQADTILTSMNTRRYILDAENLK
                     TATKARRRKPIFVIDTGVPGDIDPAVEVLEDVFLYTLDDLERVTRVGRASRAQEAETA
                     WQIIDDEAAIFDASQSVESGEPGELHQADTSDNIESLR"
BASE COUNT          691 a          666 c          704 g          672 t
ORIGIN      
        1 atcagctttt gattacacgt ctgcttaaaa agggtgacag ttacaatgtg ccaaatcgaa
       61 ccggcttgag cttaatcacc gccaatgcgg gtgctttgga aatcctagtg gatggcacgg
      121 cagtaccctc gattggtccc atcggggcag ttcgccgcaa tatcttattg gaagccgaaa
      181 agctcatcga cggctcggca atcatcgaat gattatcttc gccaattccc agaaaaacct
      241 gttaaacacc aatcatttat agcaatttag tgtcttaatc tggtaggcac gatgaagttt
      301 acgtggctga tcagcgtggt gagattgcaa ctatattttg gaacttttac taaatgactt
      361 cgttaaatcc agttcgcggc acgcaagata ttctgcctga agagggccgt ctctaccggc
      421 gcgtcgaaga aaccgctttt gaggtcgccg agcgctatgg ttttggcgaa atcaccacgc
      481 caattttcga gtttaccgag gttttcagcc gcaccctggg cgatacatcc gacattgtaa
      541 ccaaggagat gtataccttt gaagataagg gtggcgatca aatcacgctc cggcccgagg
      601 gcactgccgg tgtagcgcgc gcgtttatat cgaatgggtt acagcagaat ttaccgctca
      661 aactttttta tcgtggacct atgtttcgct atgaacgccc gcaaaaaggc cgccgccgcc
      721 agtttcgcca agttggtgtc gagattttgg gagttgccac accacaagcc gatattgaaa
      781 ccatttcaat tgcccagact tttctggaag agcttggtct taaagactat attaagcttg
      841 agcttaacag cctcggtgat accgatagcc gcagcgctta ttgcgatgag ctggtaaagt
      901 atctctccga tcatcaagat aaactatcaa aagacagcct ggaacgactg gaccgcaatc
      961 caatgcgcat tctcgattcc aaagacgagg gtgatcaggc ggttgttgtt gatgcaccgc
     1021 gtctccagga taacctaaat gaggcttcgc aaagtttttt tgaagacctt tgtgaaggct
     1081 taaccaagct gggtattgtt tttgaacata atacaaatct tgtgcggggc ctcgattatt
     1141 actgccacac tgcgtttgag ttcaagacca gtgatctcgg cgcgcaaggc acggtgctgg
     1201 cgggcgggcg gtatgacggg ctcgtcggcc agatgggcgg accggaaaca ccgggtatcg
     1261 gctgggctgc aggtgtcgaa cgcttgtcgc ttctgctgga tgacggcgcc gaagccaagc
     1321 gtcctattgc cgtaattccg gttggcggca aagccgagag cgaagccatg gtggttaccg
     1381 aaatgctgcg taaaaaaggc tatcgggttg atctcggcta ttccggtaat ctcaaaaagc
     1441 ggatgaagcg ggccaatcgg ctaaatgccg tagctgccgt cctattaggc gaagatgaat
     1501 taacgcgaaa tgtcggcacc ctgagaaata tggattccgg tgagcaaaaa gaagtatcat
     1561 tggaaacatt ggaagatcac ttagcacttt ataagtaggg tgagtaacag aaatgctatg
     1621 atcgatcaaa aaataaaacc ggatcagtta gaaggatcgc ttgtcattgt cggtgccaac
     1681 caccggtcgt caacgatgct gctgcgtgat cgattgttta tttcagaaac agtattaccg
     1741 tccttttata accgcctgcg cgatgctggt tttaatgaag caattatttt ttcgaccatc
     1801 gatatcacgg agattgtcat cgcggcgccg tcgaattcac cggctaccac agccgaagag
     1861 gttgtaaaac tgctcgctgc ccatgccggt gaaagccgta gtgaaattga aagtcaaatt
     1921 tatactctaa gtggccggga agcgatcaaa catctatttg cagttgcagc agcgctggat
     1981 agcttggtta tcggcgacac tcaattactc ggccaattgc gctccgccca ccgccatgcc
     2041 cacaccaaca atatgactgg cgcctatttg aataatctag tcgcctcatc acaaaaagct
     2101 gcggaacgta tctgctttga aaccgaaatt gatcaacggc cggtatcgat tgctgccgca
     2161 gcggttcaag ttgcccgtga ccttcatggc gatctggcgc actcgacggg cctgttgatc
     2221 ggggctgggg aaatggggga aatgctggct tccagtatgc gttcggcggg acttggcaat
     2281 ttaattgtca ctcatccctc ggatcaacgc gccgatatct tgggccatca tctcaactgt
     2341 catatcggcg ctttcgcgga tttggcgcag ctcctgaccc aagcagatac tatcctaact
     2401 tcgatgaata ccaggcgtta tatccttgat gcggaaaact taaaaactgc caccaaagcg
     2461 cggcggcgca aaccgatctt tgtcatcgat accggcgttc cgggagatat tgatcccgcg
     2521 gtggaagttc tcgaagacgt atttctctat actctcgacg atttggaacg ggtcactcgg
     2581 gtaggccgcg cctcacgtgc ccaggaagcc gagacggcgt ggcagattat cgatgacgaa
     2641 gcggccatat ttgatgcctc ccaatcagtt gagtctggcg agcccggaga attacatcaa
     2701 gccgatacct cagataatat cgaaagcctt cgt
//
LOCUS       DASCNL010000759         2099 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001557611, whole genome shotgun sequence.
ACCESSION   DASCNL010000759 DASCNL010000000
VERSION     DASCNL010000759.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001557611"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(523..1668)
                     /locus_tag="QF359_09990"
     CDS             complement(523..1668)
                     /locus_tag="QF359_09990"
                     /inference="COORDINATES: protein motif:HMM:NF024771.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HJO87282.1"
                     /translation="MIFRRKFPATSSNRKQKMEALMPVTPISDINVSVLEVPFDKPIQ
                     SALGRYVGSDWVVVEMRAEDVVGYGYSMSLDRRGTKAVVSYIENELAPMANGQDAAAP
                     EAVWQTMFAPNKARLRGGVGVHALSAVDTASWDVAARLAGVSLNRMIGGYAQTADVYG
                     SGGWLSLSDEELVAEAQRHAANGITNYKLKIGGARDQARVGLLRREMGDDFTLYVDAN
                     QNFNVREAVAASAWLADFGVAWLEEPVLADSPMDMEAVAAESAIPIAAGENAYFRWGF
                     RDLVERQAVTYLQPDIGRCGGVTEWIKIAHLADSYNLDLTSHLLHELSVGLIAAFPSG
                     HAVEYMNFFKDNPFTQDFSVVDGKIAVPDVPGHGVEFDPVAHKKYRV"
     gene            complement(1577..1864)
                     /locus_tag="QF359_09995"
                     /pseudo
     CDS             complement(1577..1864)
                     /locus_tag="QF359_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_263013213.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          530 a          572 c          463 g          534 t
ORIGIN      
        1 cttaattaag cctgtggtca ccaactatag tggcctcttt ttaaaaggcg gggggagttt
       61 ctacatcatt aaacccctta cggggtgcat taaggacgtt tggccatcct taataatcct
      121 caccaccaac tgatgtcagt tggatcacaa acagttaagt aaagaaagtt tgtctacagt
      181 gtaccccgtc agcgccaatt ggacaaaatg agatgattgc gtaagagagt gtccggctcc
      241 tttagttgat attatgcggc cctcgagttc cgatttaact gcccccaatt ctggacttat
      301 gttccacgga tcatccataa ctcttgtatc gtaccatatt atattacctt ccgaaggcag
      361 aggtcacagg tttgaatcct gtcaggtgtg caagtttctt caatgaatta gcagaaatac
      421 atcactttca tatttctgct atggcacact gtgaattaga ttttacacat cctttgataa
      481 ccggatcggg cattatactg atggtgtcct aacctcaaaa ttttatactc gatatttttt
      541 atgcgccacc ggatcaaatt caacgccatg ccccggcaca tcgggcacgg ctatcttgcc
      601 atcaactacc gagaaatcct gggtaaaagg attgtcttta aaaaagttca tatattcgac
      661 ggcgtgaccc gatggaaaag ctgcaataag accaacgctt aattcatgga gcaaatggct
      721 cgtcagatcg agattataac tatccgccag atgcgcaatc ttgatccact ccgtaacacc
      781 gccgcagcgt ccaatatcag gctgcagata ggtcactgct tgacgttcaa ccagatcacg
      841 aaagccccag cggaaatagg cgttttcacc ggcggcaatc ggtatggcac tctcggcggc
      901 gacagcttcc atatccatcg gactatcggc gaggaccggc tcttctagcc aggcgacgcc
      961 aaaatctgcc agccatgctg atgccgctac cgcctcacgc acattgaaat tttgattggc
     1021 atcgacatag agggtgaaat cgtcgcccat ttcgcggcgc aataagccaa cgcgagcctg
     1081 atcccgcgcg ccgccaattt ttaatttgta gttagtgatt ccgttggccg catgacgttg
     1141 tgcttcagcc accaactctt catcactaag agataaccag ccacccgaac catagacgtc
     1201 ggcggtttgg gcatagccgc caatcatgcg attaagcgac acgccggcca accgcgcggc
     1261 gacatcccag ctggccgtat cgactgccga taaagcatga accccaacgc ctcccctgag
     1321 ccgggctttg ttgggcgcga acattgtttg ccaaacagcc tcgggtgccg ccgcgtcctg
     1381 gccgttcgcc attggcgcca attcattctc aatataggaa accactgctt tggtgccacg
     1441 gcgatcaagc gacatggagt aaccgtagcc gacaacgtct tcggctcgca tttcaaccac
     1501 tacccagtcc gaaccaacgt agcgcccgag cgcactttga atcggtttat caaacggcac
     1561 ttccagtacc gaaacattaa tatccgagat cggtgttacg ggcatcaaag cctccatttt
     1621 ttgtttccgg ttcgaagaag ttgccgggaa ttttcggcgg aatatcatca gatggtttct
     1681 caactttccg ggcagcagca actttggcaa aatcttcaac cgcctgagga ccggtacgcg
     1741 ctaatccggc ttggaataaa tcaggatccc gctaactcca ggcgctgcgt tcgctgtaaa
     1801 acggcaccta cttattattg atacggttct cttgaaaatc gataatgcct ttaagagcat
     1861 cttcgaagct ctcgctgccc ggattccagg tactgcaatt atagtcatca acattcataa
     1921 aaattttcct cgatactaag aaattcgtga ttgcagacta agtcaatttt atagtccttg
     1981 ccagccagat tgttttgccc gcccgcctta gcggtctaga ttggcgtcat gttcaaccca
     2041 gccactctgt tatctcactt cggcggtatt ggccgagcgt tctcaacccg taactaccg
//
LOCUS       DASCNL010000760         5771 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001557803, whole genome shotgun sequence.
ACCESSION   DASCNL010000760 DASCNL010000000
VERSION     DASCNL010000760.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5771)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5771)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5771
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001557803"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(2..670)
                     /locus_tag="QF359_10000"
     CDS             complement(2..670)
                     /locus_tag="QF359_10000"
                     /inference="COORDINATES: protein motif:HMM:NF013961.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HJO87283.1"
                     /translation="MSFEEYLKPGKFIDSDHPVVIEYAKVHVGTGTTDIEKALSLFYA
                     VRDGIRYNPYMKIESPTAYRASDAVKSGEGWCVPKAALMAACLRINGIPARPGYADVK
                     NHLASKHLLDLMGTDIFPWHSYCEVYLDGKWVKSTPSFNLSLCEKFGLKPLDFDGKKD
                     SLFHEFDQAGNKHMDYILERGTYTDVPMDEMLVTFKEMYLPEYFESIDGDLYAEADAE
                     RAAD"
     gene            824..1324
                     /gene="gpt"
                     /locus_tag="QF359_10005"
     CDS             824..1324
                     /gene="gpt"
                     /locus_tag="QF359_10005"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000310 - xanthine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HJO87284.1"
                     /translation="MNELRDDVVDYVVTWAEVHRDTKLLARKLIGTDEWKGIIAVTRG
                     GLVPAAIIAREMDIRNIDTICIATYDEQYIGDVNMIKVPDLAVAEKGEGWLMIDDLVD
                     TGATIKAARELLPNCHIATVYAKEMGRPSVDTFVHEVPQNYWVFFPWDTDVQYSAPLH
                     SANGGD"
     gene            complement(1329..2138)
                     /locus_tag="QF359_10010"
     CDS             complement(1329..2138)
                     /locus_tag="QF359_10010"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO87285.1"
                     /translation="MPTQIVDGVTVNYHDVGSGEPIVLIHCSSSSHRQWRGLWELLQD
                     TNRVISIDMLNGGGTDVWTNHEGSLLVDESTLIHAITGDLDEPFHLVGHSYGGAIAYH
                     FAMTAPESIKSLILIEPMLGWLLDSVNDQEFYDEILNVAEYFWQKFETGKPGEAINYY
                     FDYWNGEGAWDSLDQGQADYVLAGAEKNYHEFKAIFNSGGDLPVPETFLNPTLLVGGG
                     SSNKPTLRILEILETKFPNTRKKLVDGAGHMSPITHSDQVNAIIEEFITNY"
     gene            complement(2152..3210)
                     /locus_tag="QF359_10015"
     CDS             complement(2152..3210)
                     /locus_tag="QF359_10015"
                     /inference="COORDINATES: protein motif:HMM:NF012607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87286.1"
                     /translation="MSKPKVFIYTPVDQTGDSHRQLKSAGCDLKLGDVSWHKLDGDLN
                     IIDDVADDTAALVGVAVRKIPITREVMLKSPELRIIAKYTVGTDDVDVEAATELGILV
                     THCPTEANWSGVAEGAMALMLTLLKKVRERDQYVKDGNWRDERLQGTYLGRRQDGYEG
                     ITIGIIGLGRIGSRLADLLAPWRVRLIAYDPYKSDQQFIHHNVERVELDELLAEADVV
                     TLHTNLTQETRGLMGATELVKMKETAYLLNTSRGAVVDENALFDALDKNQIAGAAIDV
                     FEEEPLPKQSALLGLGNKILLSPHVITFNVGAGLTTAIPWATEHVIQAMKGEVPEHTY
                     NETVIDRWVERFGGQSLL"
     gene            complement(3550..3762)
                     /locus_tag="QF359_10020"
     CDS             complement(3550..3762)
                     /locus_tag="QF359_10020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87287.1"
                     /translation="MGKIFVLLFVIVLVAVSFWMFRYQYFDKEMDGLKYTTRRHIITE
                     EECYFVGEFKRSEIKHLGLVHCAEDH"
     gene            3907..>5771
                     /locus_tag="QF359_10025"
     CDS             3907..>5771
                     /locus_tag="QF359_10025"
                     /inference="COORDINATES: protein motif:HMM:NF014758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HJO87288.1"
                     /translation="MNNFNPNSPVIRTEDPRFLKGRGQFIDDINLTNLLYGHMLRSPH
                     AHANIVTIDVSAAKAASGVADVFTGADYLEAGFGEMPHNTVAMPTFDPEKIYPAKHYP
                     LAAERVRYVGDGVAFIVAETKAQAQDAAELIDVEYEILKAVVGPAHAISKGAPLVRDD
                     CPNNIAYEFHQGDIEATDKAFAAASHIVKHQIRINRLTASTIETRGVVADYNPETKFT
                     TVHLPTQGAFGTRGILANRFFNQPEENFRVITGDIGGSFGMKGSTYSETPLAVWASQK
                     HCRPVKWVSDRAEAFVSDNHARDKVVNAELALDDDYNFLGLRVHSIANTGAYYSTMST
                     FPIIMSTSGLAGTYKTPTIHYHATAVFSNSNPMSPYRGSGRPDAGYIIERIIDIAARE
                     LDVDPAELRQRNLIAEDMMPFKPALGPSYDSGHFPKNQEVALAKADAEGFEARRAEAQ
                     ERGKLLGLGMGNNVEGSAPPGQEWAKLGINEDGNALLYAGSTDQGQGHATMYTQIICE
                     HLGMKPGQVRIFEGDTGILEKGFGSGGSKVSGLGGSAVFETTGMLIEKGKKLAAEHLE
                     AAKADIDYADQTFTVAGTDRSITFTELAKSAKEEDLTAVGTHKTSAPTFPSGCHI"
BASE COUNT         1535 a         1477 c         1302 g         1457 t
ORIGIN      
        1 actaatctgc cgcccgttca gcatccgctt cggcgtataa atcaccatcg atactttcaa
       61 aatattcggg cagatacatt tccttaaagg ttaccagcat ctcatccatc ggtacatccg
      121 tataagttcc gcgttcaagg atataatcca tgtgtttgtt gccagcttgg tcaaattcgt
      181 ggaacaatga atcttttttt ccatcaaaat ccaacggttt gagaccaaat ttttcgcata
      241 gcgacagatt gaacgatggc gttgacttaa cccatttacc gtcaagataa acttcgcaat
      301 aggaatgcca ggggaagata tcggtaccca tcagatccag taggtgtttt gacgccaggt
      361 ggtttttcac atcagcatag ccggggcgcg ccgggatgcc atttattcgc aggcaggctg
      421 ccatcaacgc cgctttcggc acgcaccacc cttcacccga tttaaccgca tcactggccc
      481 ggtaggcggt tgggctttca attttcatat aaggattgta gcgaatgcca tcacggaccg
      541 cgtaaaataa acttaaagct ttttcaatat cggtagtgcc ggtaccgaca tgcactttgg
      601 catactcaat aacaaccgga tgatcgctat caataaactt tcccggtttc aaatattctt
      661 caaatgacat ttttcactca cagatttgta tcgcagattg acacttaggg agaccatacc
      721 cttggacttg ccatgacaca atccaatgct aaacttgatc taactacatc tcagcataaa
      781 atctggccaa gccaacaaca tatacagggg gcgaaaaaat caaatgaatg aactccggga
      841 cgacgtcgtt gactatgtgg tgacttgggc ggaagttcac cgcgatacca aactgctggc
      901 cagaaaactc atcggaacgg acgagtggaa aggaattatt gcggtaacac gaggagggtt
      961 ggttccggcg gcaatcatcg cccgcgaaat ggatattcga aatattgata cgatttgcat
     1021 cgccacttat gacgagcaat atatcggcga tgttaacatg atcaaagtgc ctgatttagc
     1081 cgtcgccgaa aaaggtgaag gctggttgat gatcgacgat cttgttgata ccggcgcgac
     1141 cattaaagca gcccgtgaac tattgcccaa ttgccatatt gccacagttt acgccaaaga
     1201 aatgggccgc ccatctgtcg acacatttgt ccatgaagtg ccgcaaaact actgggtatt
     1261 ttttccctgg gataccgatg tgcaatattc ggcgccactc cacagtgcta atggtggcga
     1321 ttaagcgctc aataattggt aataaactct tcgatgatgg cattgacctg atcgctatgg
     1381 gtgatcgggg acatatgacc agcgccatcg acaagttttt tccgggtgtt gggaaatttc
     1441 gtttccaata tctctaggat cctaagcgtc ggtttgtttg aacttccgcc acccaccagc
     1501 aatgtcgggt ttaagaacgt ctcgggtacg ggcaaatcac caccactatt gaatatcgct
     1561 ttgaactcat gataattttt ctcagcacca gctaatacat aatcggcctg tccctggtcc
     1621 aaactatccc acgctccctc gccattccag taatcgaaat agtagttgat ggcttcaccc
     1681 ggtttgccgg tctcaaattt ttgccagaaa tattccgcca cattcaatat ttcatcataa
     1741 aattcttggt catttaccga atcaagaagc cagcccagca tcggttcaat aaggatcaaa
     1801 cttttaatac tctcaggcgc agtcattgca aagtggtagg caatggcccc tccataggaa
     1861 tgccctacca gatgaaatgg ctcatcaaga tcaccggtaa ttgcgtggat taatgtggat
     1921 tcatccacca atagagaacc ttcgtggttc gtccagacat ccgtaccacc cccattcagc
     1981 atatcaatcg aaatcacccg attagtatct tgcagcaact cccacaatcc tcgccattga
     2041 cgatgcgaac ttgaggagca atggatgagg acaataggct cgcccgaacc gacatcatga
     2101 taattgacgg ttacgccatc gacaatttga gtaggcactt aatactccgg attacaaaag
     2161 actttgaccg ccaaaacgct cgacccagcg gtcaatgacg gtttcgttat aggtatgttc
     2221 tgggacttca cctttcatcg cctggatcac atgctcggtc gcccaaggaa tggcagtggt
     2281 gaggccagca ccgacattaa aagtaatgac atgcggtgac agcaagattt tattacccag
     2341 tcccaagagt gctgattgtt tcggtagggg ttcctcttcg aacacatcaa tggcagcacc
     2401 ggcaatttga ttcttgtcta aagcatcgaa taaagcgttt tcatcaacca ccgcaccccg
     2461 tgaggtatta agcaaatacg cggtctcttt cattttaacc aactcagttg cgcccatcag
     2521 accccgggtt tcctgtgtta gattggtgtg cagtgtaacc acatcggctt cggccagcaa
     2581 ttcatccaat tcgacgcgct caacattgtg gtgaataaat tgctgatcgc ttttgtaagg
     2641 atcataggcg atcagccgca cccgccaagg cgccaataaa tctgccaggc gcgaaccgat
     2701 ccggcctaag ccgataattc caatggtgat accttcatag ccatcctggc ggcggccgag
     2761 ataggtgcct tgcaggcgtt catcccgcca attgccatct ttgacatatt ggtcccgttc
     2821 ccggactttt ttaagcaatg tcaacattaa ggccattgcc ccttcggcaa cgcccgacca
     2881 attggcttcg gttgggcagt gggtgacgag aataccaagc tcggttgcag cctcaacatc
     2941 gacgtcatcg gtgccgacag tatattttgc aataattcgg agctccggtg atttcagcat
     3001 aacctcgcgg gtgatcggaa tttttctcac cgccacccca accaaagccg cagtgtcatc
     3061 ggccacatca tcaataatgt tcaagtcacc atcaagcttg tgccaagaaa catcgccgag
     3121 tttgagatcg catcctgcgg atttcaattg acgatgggag tctccggttt gatctacagg
     3181 tgtataaata aataccttgg gcttactcaa aatgcattcc ttccctgacc gcattaattt
     3241 ttttcagttt atagatgaga gttaaagtgt aaaagcctgc tcatttgcat aatgaatttt
     3301 aataatattt tcgacgttaa acttctaatt gaaatttatg gatgcaaaat acaaaagtat
     3361 gacctgcaat acttgcatag ccacccattt ggaaaggccc ttttttgtct ttatatatag
     3421 aatatatata ctacttctgt tgacgttttg gccacattac tgggtttcga tctatcctgc
     3481 atagagatag tcttggctaa attactactg agagtaaaaa ttgaaattaa attattggcc
     3541 tgcccccgtt tagtggtcct ctgcacaatg cacgagaccg agatgtttaa tctctgatcg
     3601 cttgaattca ccaacaaaat agcactcttc ttcggtgatg atatggcggc gggtggtata
     3661 tttcagtccg tccatctctt tatcgaaata ttggtagcgg aacatccaga aagaaaccgc
     3721 aaccagcacg atgacaaata acaggacgaa aatttttccc acagcaaaac tctattaatt
     3781 tagtgctatc tatacccgca aattacgaca ataacacccc tttaacagcc gccggtagat
     3841 cgcttgcagg tcccggattt gctctctaca gtagcgaaaa taattgtact atcagggtaa
     3901 caacagatga ataatttcaa ccccaattca ccggtaatcc ggaccgaaga cccacgtttt
     3961 cttaagggca gaggccagtt tattgatgat attaacctga ccaatctact ttatggtcat
     4021 atgctgcgct cgccccacgc ccatgcgaat attgtgacga tagatgttag cgccgccaaa
     4081 gctgcttccg gtgtggccga tgtgttcacc ggcgcagact atcttgaagc cggcttcggc
     4141 gaaatgccgc ataacaccgt ggcgatgcct acttttgatc cagagaaaat ttatccggcc
     4201 aagcattacc cactggccgc cgagcgtgta cgctatgttg gggatggcgt cgcgtttata
     4261 gtcgctgaaa caaaagctca ggcccaggat gccgccgagt taatcgacgt tgagtatgaa
     4321 attctcaagg cggtggtcgg cccggctcac gccatttcaa aaggcgcacc actggtccgg
     4381 gatgattgcc ccaataatat cgcctacgag tttcaccaag gagatattga agccactgat
     4441 aaagctttcg ccgcagcatc ccatatcgtc aaacaccaaa ttcgcatcaa ccgcctaacg
     4501 gcgagcacga ttgaaacccg gggcgtcgtt gccgattata acccggagac caaattcacc
     4561 actgtccatc tgccaaccca aggggctttt ggcactcgtg gcattctcgc caatcgattt
     4621 tttaatcaac cggaagaaaa tttccgcgtc atcactggtg atatcggcgg cagctttggc
     4681 atgaaaggtt cgacctactc tgaaacgccg ctcgcagttt gggcttcaca aaaacactgc
     4741 cgaccggtca aatgggtcag tgatcgcgcg gaagcttttg tcagcgacaa tcatgcccgt
     4801 gataaagtcg tcaatgcaga actggcgcta gatgacgatt ataattttct tggccttcgg
     4861 gttcattcga ttgccaacac cggtgcttat tattcaacaa tgtcgacttt tcccatcatc
     4921 atgtcgacca gtggccttgc cggcacctat aaaacgccga ccattcacta tcatgcgacg
     4981 gcagtatttt cgaattcaaa cccaatgtca ccttatcggg gatctggccg gcccgatgcc
     5041 ggctacatca ttgagcgcat tatcgatatc gcagcccggg aattggacgt cgatccggcg
     5101 gaattgcggc aacgcaactt aattgccgaa gatatgatgc cgtttaaacc ggcgctcggc
     5161 ccatcttacg actccgggca ttttcctaaa aaccaggaag tagctttggc caaagcggat
     5221 gccgaaggct ttgaggcgcg ccgggcagaa gctcaggagc ggggaaaatt gctcggtctt
     5281 ggcatgggta ataacgtaga gggctcagca cctcccggcc aggaatgggc caagctgggc
     5341 atcaatgaag acggcaatgc gttgctttac gccggctcga ccgaccaagg ccagggccac
     5401 gcgacgatgt atacccaaat catctgcgaa cacttgggca tgaaacctgg gcaggtgcgg
     5461 attttcgaag gtgacacggg aatcttggaa aaaggctttg gctccggtgg ctcaaaagta
     5521 tctggtcttg gtggctcggc agtttttgag accaccggca tgctcatcga aaaaggcaaa
     5581 aaactggccg ctgaacactt ggaagctgcc aaagctgata tcgattacgc tgatcagact
     5641 tttaccgtcg ccggaacgga tcgttcgatc actttcaccg agctggcaaa atctgccaaa
     5701 gaagaggacc taaccgccgt cggcactcac aaaactagcg cgcctacctt cccgtccggc
     5761 tgccacatct g
//
LOCUS       DASCNL010000761         1202 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001564641, whole genome shotgun sequence.
ACCESSION   DASCNL010000761 DASCNL010000000
VERSION     DASCNL010000761.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1202)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1202)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001564641"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..168)
                     /gene="ispH"
                     /locus_tag="QF359_10030"
                     /gene_synonym="lytB"
     CDS             complement(<1..168)
                     /gene="ispH"
                     /locus_tag="QF359_10030"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014625862.1"
                     /note="catalyzes the conversion of
                     1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into
                     isopentenyl diphosphate (IPP) and dimethylallyl
                     diphosphate (DMAPP); functions in the nonmevalonate
                     isoprenoid biosynthesis pathway; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HJO87289.1"
                     /translation="MSRSNTKFKILLAQPRGFCAGVERAIEIVKQALEIYGAPVYVRH
                     EIVHNKRVVDTL"
     gene            281..>1202
                     /locus_tag="QF359_10035"
     CDS             281..>1202
                     /locus_tag="QF359_10035"
                     /inference="COORDINATES: protein motif:HMM:TIGR03466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJO87290.1"
                     /translation="MKVLLTGATGFVGAAVLRQLIDHPDFGGDDVRVLVRETSDRRNL
                     DGLACEIVMGELGDQSSLKHALQGCQVLFHVAADYRIWVREPEEMINTNVTGTTNIMD
                     AALSANIEKVIYTSSVAALGINADETPADETTPSSLASMIGAYKRSKYLAEQEVRRLI
                     NKHALPAIIVNPSAPLGPRDIKPTPTGRLIINAAKGGLPAYVDTGLNFVHVDDVAYGY
                     ILAYEKGKIGERYILGGDNLSLKTLLEKVAEIMGKMAPKICIPHKVVLPFAHLAEIWT
                     RLTNGSEPFATVDGVNMSKKKMYFTSAKAER"
BASE COUNT          343 a          284 c          278 g          297 t
ORIGIN      
        1 cagggtatca acaacgcgct tattgtgaac aatttcatga cgcacataga ccggggcacc
       61 gtagatttca agcgcctgtt taacaatctc gatagcgcgc tcaacaccag cgcaaaagcc
      121 gcgtggttgc gctagcagaa ttttgaattt tgtattcgat ctactcacta aacgaccctc
      181 gattagaact attccacagc tcagaaaatg atcttcacgc cacctcctgt caaatcaatt
      241 aaaatatcgt ataaataata tggaaaaaaa tgaggtaagc gtgaaagttc ttctgacagg
      301 cgcaaccgga tttgtcggtg cggcggttct ccgccagctg atcgatcacc ctgattttgg
      361 aggcgacgat gtgcgtgtac tggtccggga aaccagtgac cgccgaaact tggatggcct
      421 cgcttgtgaa atagtgatgg gtgaacttgg cgaccaatcg tcattgaaac acgcactgca
      481 aggctgccag gttctctttc atgttgccgc tgactaccga atttgggtgc gcgaaccgga
      541 ggaaatgata aacaccaatg tcacaggcac cacaaacatc atggatgcag cgttatcagc
      601 caacattgaa aaagtgattt acactagcag cgtggccgca cttgggatta atgcggacga
      661 aacaccagcg gatgaaacga cgccatcatc gttggcatca atgattggcg cctataagcg
      721 atctaaatat ctggctgaac aagaagtgcg cagacttatc aacaaacacg ccttgcccgc
      781 tattatcgtc aatccatccg cccctcttgg tccgcgtgac atcaagccaa ccccaacagg
      841 tcgcttaatt atcaatgctg ccaaaggtgg actgccagct tacgttgata ccggtcttaa
      901 ttttgttcat gttgatgatg tcgcctacgg ttatatttta gcttacgaaa aaggtaaaat
      961 tggtgagcgt tatattctgg gtggtgacaa tctcagccta aaaaccttat tggaaaaagt
     1021 tgcagaaatt atgggtaaaa tggcgcctaa aatttgtatc ccgcataaag tcgttctgcc
     1081 attcgctcat ctcgccgaga tttggacaag actcaccaat ggatcggagc cttttgcgac
     1141 cgttgatggg gtgaacatgt caaaaaagaa aatgtatttt acctcggcta aagcagaacg
     1201 cg
//
LOCUS       DASCNL010000762         1430 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001565993, whole genome shotgun sequence.
ACCESSION   DASCNL010000762 DASCNL010000000
VERSION     DASCNL010000762.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001565993"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1430)
                     /locus_tag="QF359_10040"
     CDS             complement(<1..>1430)
                     /locus_tag="QF359_10040"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HJO87291.1"
                     /translation="TPSIEVILPDPTFIEERLDKLAGIILTHGHEDHLGAVPYLWDRL
                     GCPVYATPFTAALLCSKLEMDELARDIEIIEMPLSGKFDVGPFSIELITLTHSMPEPN
                     AVVVRSPLGTIFHTGDWKFDPDPVVGEAADLDALKALGEEGILAAIGDSTNVFIAGSS
                     GSEAGILENLSELIGKCEGRVAVACFASNVARLKTIYQAATANGRAVSLVGRSLWRIN
                     AAARKVGYLDDLPPFLEAEDTEDLPKDQILYICTGSQGEPRAALSRIATQDHRNVELG
                     EGDTIIFSSRVIPGNELSIGRLQNQLVQNGVEVIADENGNVHVSGHPAEDELVEMYQY
                     VRPQIVVPVHGEPRHLKRHAEIAKNCQVPQTILVNNGSVVKLAPGQAKVVNEVQAGRL
                     ALDGPRIVPLESQVIKDRTRILYNGTAVLTLVLDESGNMVGKPQLTTHGLIDDQEAPY
                     VLEKIFEDVEDVLIDMSDADIMDDVKV"
BASE COUNT          352 a          398 c          343 g          337 t
ORIGIN      
        1 actttgacat catccattat atctgcatca ctcatatcaa tcagcacatc ttcgacatct
       61 tcgaagattt tctccagcac atatggtgcc tcctgatcgt caattaagcc atgcgttgtc
      121 agttgcggct tcccaaccat attgcctgat tcatctagaa ccaatgtcag aaccgcggtg
      181 ccattataaa gaatgcgcgt gcggtctttg atcacctgac tttcgagcgg cacgatacgt
      241 ggcccatcca aggcgagacg gccagcctga acttcgttga caacttttgc ctgaccaggc
      301 gccagcttca ccaccgaacc attattgacc aatatggttt gtggcacttg gcagttttta
      361 gctatttcgg catggcgttt gagatggcgt ggctcaccat gtaccggcac gacgatctgt
      421 gggcggacat attgatacat ttcgaccagc tcgtcttcgg ccgggtgccc cgaaacatgc
      481 acattgccat tttcatcggc aattacttca acaccatttt gcaccagctg gttttgcagc
      541 cggccaatgg aaagttcgtt gccgggaatg acgcgagacg agaagatgat cgtatccccc
      601 tcacctaact caacgttgcg atgatcctgt gtggcgatgc gggataatgc agcccgaggt
      661 tcaccttggc tgcccgtaca aatgtaaaga atttggtctt tcggaagatc ttctgtgtct
      721 tcggcttcca gaaaaggcgg caaatcatca aggtagccaa ccttgcgggc agcggcatta
      781 atccgccaca gcgaccgacc gaccaagctt actgcccggc cattggccgt cgccgcctga
      841 taaatcgtct taagtcgggc aacgtttgaa gcgaagcagg ccaccgcgac gcggccttcg
      901 catttaccga ttagctcgga gagattttct agaataccgg cctcggagcc agatgagccg
      961 gcgataaata cattagttga atcaccgatc gccgccaaaa tcccttcttc gcccaaggcc
     1021 ttaagagcat ctaaatcagc cgcctcgcca accaccggat cgggatcaaa cttccaatcg
     1081 ccggtatgaa atattgttcc caggggcgag cgcacgacga cggcattggg ttctggcatg
     1141 gaatgggtca gtgtaatcaa ctcaattgag aacggcccaa catcaaactt gcccgataat
     1201 ggcatctcga taatctcaat atcacgcgcc aactcatcca tttcgagctt ggagcacagc
     1261 aatgcagcgg taaacggcgt cgcataaact ggacagccca gccggtccca cagatacggc
     1321 accgcaccta aatgatcttc atgaccgtgg gtaaggataa tgccggcaag tttgtccagg
     1381 cgttcttcaa taaaagttgg atccggtagg ataacttcaa tgctcggcgt
//
LOCUS       DASCNL010000763         2732 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001574186, whole genome shotgun sequence.
ACCESSION   DASCNL010000763 DASCNL010000000
VERSION     DASCNL010000763.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2732)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2732)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001574186"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            136..1209
                     /gene="prfA"
                     /locus_tag="QF359_10045"
     CDS             136..1209
                     /gene="prfA"
                     /locus_tag="QF359_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HJO87292.1"
                     /translation="MSIAEKLNRVVARHDELRDTMATQTDMDSQELQRIAKEFAELTE
                     VVKGVEEFRAMEAEIQDLADLITDSDTVGEMRTMAEEEFHELKQKILKKEREIQLLLL
                     PKDEADEKNAILEVRAGTGGDEASLFAADLFRMYQRYAEQHKWKFEPIDINETGIGGY
                     KEASANITGKGVFAKLKFESGVHRVQRVPETESQGRVHTSAATVAVLPEAEEVDVYID
                     QKDLRVDTYRAQGAGGQHVNKTDSAIRITHLPTNIVVQCQDGKSQHKNRAQAMKMLRA
                     KLYETERAEKDAARAADRKNQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRAME
                     GDLDEVFNALATEDQAARLAEIT"
     gene            1212..2072
                     /gene="prmC"
                     /locus_tag="QF359_10050"
     CDS             1212..2072
                     /gene="prmC"
                     /locus_tag="QF359_10050"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HJO87293.1"
                     /translation="MPAISTNTIGAIYQQLSDELATAGIEEPRLEARMLMSFAAGIDQ
                     SHILGYPEDDIAVKSLAELSKFAARRKSGEPIAYITGQKEFWSLNFKVSLETLIPRPD
                     SETLIEAVLGELPDKNASLKILDLGTGTGCLLLALLSELPNALGLGVDSNSKTCDIAR
                     DNANQLGLVSRVTIQQRDWLTGLNGNFNIIISNPPYIVESEIAALEPDVNQFEPHLAL
                     SGGADGLAAYHLIATQCSAHLTPDGFLAVECGMGQIPDIKGIFLKNNLKIKSIHRDIA
                     NVERCILATV"
     gene            2322..>2732
                     /locus_tag="QF359_10055"
     CDS             2322..>2732
                     /locus_tag="QF359_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HJO87294.1"
                     /translation="MKQTSNSRRSRGRGNGKRQGNRNSNYDSGGPDGRIRGNASQVHE
                     KYLTLARDALAGDDRISSENYFQHAEHFYRILHANADGQKDSTKDGDTNQKDRDRNRR
                     NHNRGNGQDNNRNQQQNAGGEDKPSEETSPEEITE"
BASE COUNT          809 a          650 c          668 g          605 t
ORIGIN      
        1 gccgatacct cagataatat cgaaagcctt cgtcgcgcag ctttagatga agctggtggt
       61 gatgctgaaa aggcgacccg attgctgctg gatcgtctca aagacttggc aaaaaattca
      121 agagacacct aaccaatgag cattgccgaa aaactcaatc gcgtggttgc gcggcatgat
      181 gaattgcgcg acaccatggc cactcaaacc gatatggata gccaggaact gcaacgtatt
      241 gccaaggaat ttgcggaact aaccgaagtc gttaaaggtg ttgaagaatt ccgcgccatg
      301 gaagcggaaa ttcaggactt agccgattta atcaccgact ctgataccgt tggtgaaatg
      361 cgcaccatgg cggaagagga attccacgag ctcaaacaaa aaattctgaa aaaagagcgg
      421 gaaatacagc ttttgctttt gcccaaagat gaggcagatg aaaaaaatgc cattctcgaa
      481 gtccgcgccg gtaccggtgg ggacgaagct tccctgtttg ccgcagattt gttccgtatg
      541 tatcagcgat atgccgaaca gcacaaatgg aagtttgagc cgatcgacat caatgaaacg
      601 ggtattggtg gctataaaga agcgtctgcc aacatcaccg gtaaaggggt ttttgctaag
      661 cttaagttcg aatccggcgt tcaccgcgtt cagcgggtcc cggaaacaga atcacagggc
      721 cgcgttcata cctcggcggc cacggtcgcg gtgctgcctg aagccgaaga agttgacgtt
      781 tatattgatc agaaagacct gcgtgtcgac acctaccggg cgcagggagc cggtggccag
      841 catgtcaata aaaccgatag cgccattcgg atcactcatt tgccgaccaa tattgttgtc
      901 cagtgccagg atggtaaatc gcagcacaaa aaccgcgccc aggcgatgaa aatgctgcgc
      961 gctaagctgt atgaaacgga gcgtgctgaa aaagacgccg cccgagcagc ggatcgtaaa
     1021 aatcaagtcg gctcgggtga ccgctcggaa cgcatccgca cttataattt tccgcaaggc
     1081 cgcatcactg atcaccgcat taatctcacg ctctataaat tggaccgggc gatggagggc
     1141 gatctggacg aagtgttcaa tgcgctggca acggaagacc aggcagcgcg actcgccgaa
     1201 atcacctaac cgtgcccgcc atctcaacca acactattgg cgcgatttac caacagctga
     1261 gtgacgaact ggcgacggct ggtatcgagg aaccccggct ggaggcacgc atgttaatga
     1321 gttttgcagc cggcattgat caatcccata ttcttggtta cccggaagat gatatagcgg
     1381 tcaaatcatt ggccgaattg tccaaattcg ctgcgcgtcg taaatccggt gaaccgattg
     1441 cctatatcac cggccaaaaa gaattttgga gcctcaattt taaagtctcc ctggagactt
     1501 taattccccg gcccgacagc gaaactttaa ttgaggcggt tttgggcgaa ctccctgata
     1561 aaaacgccag cctcaaaata ctggatcttg gaaccggtac tggatgcctt ttactggcat
     1621 tgctgtcaga acttccaaat gctttgggac taggcgtcga tagcaattca aagacctgcg
     1681 atatagcgcg agacaatgcc aatcaacttg gcctagtttc cagagtaact attcaacaac
     1741 gtgattggct gaccgggtta aacggaaatt ttaatatcat catcagcaat ccgccatata
     1801 ttgtcgaatc agagattgcc gcgttggaac cggatgtaaa tcaatttgaa ccgcatctgg
     1861 ctctctcagg cggagctgat ggcctagctg cataccatct tattgcaact caatgttccg
     1921 ctcatttgac gccggatggg ttcctggcag ttgaatgtgg tatgggacaa atacctgata
     1981 tcaaaggaat ctttttaaaa aacaacttaa agataaaaag cattcaccga gatatcgcaa
     2041 atgtagagcg ttgcatctta gcaacagttt aaaaatcata aaaaaaatgt gaaattatag
     2101 tttgaaaacc tcgtaaagat cattaggttg agtggaacgg atgggctgca aacgccattt
     2161 ggatggtttt agtttagcgg ccgccataat tccccaaacg tggaaaagaa ctgatagcgt
     2221 cgcccatgat cataagatca ataatttaat gggcattaaa tcgaagcagt tcatttggat
     2281 gggagcctat tcagctaaaa aaacagtgaa gttatgacac catgaaacaa acttccaatt
     2341 cccgccgttc tcgtggacgt ggtaacggta agagacaagg caacagaaac agcaattacg
     2401 atagcggcgg cccagatggc cgtattcgtg gcaatgccag ccaggtccat gaaaaatatc
     2461 tcactttagc ccgtgatgcc ctcgctggcg atgatcgaat ttcttcagag aactatttcc
     2521 agcacgctga gcatttttat cgcattttac atgccaatgc cgatggccaa aaagacagca
     2581 ctaaagacgg cgatactaat caaaaagatc gtgaccgtaa tcgccgcaac cacaaccggg
     2641 gaaatggcca ggataacaac cgcaatcaac aacagaatgc cggtggcgaa gacaaacctt
     2701 cagaagagac atcaccggaa gaaatcactg aa
//
LOCUS       DASCNL010000764         1739 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001574643, whole genome shotgun sequence.
ACCESSION   DASCNL010000764 DASCNL010000000
VERSION     DASCNL010000764.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001574643"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..814
                     /locus_tag="QF359_10060"
     CDS             <1..814
                     /locus_tag="QF359_10060"
                     /inference="COORDINATES: protein motif:HMM:NF027890.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HJO87295.1"
                     /translation="MQVETNIDEADIGQIRPGQTATFGVDSFPGQEFKGIVNQVRKKP
                     QTVQNVVTYTVVIAANNADLKLLPGMTANVQVQVSDRRNVLKLPNRSLRFVPPGLTPK
                     PQTAGAQAGPGGGGTRGGAGGGPPNREARRAQAQARMKRLVEKVGLTEDQQQQVRDFG
                     RQIFQRIRTLAQGGRGPGFRDAIRKMRQENDKRIFTILTPEQKVKYRLMIAERRSNPV
                     TPGRVWVLEDGKLKQVDVMIGVGDGTSTEMVRGELKEGQQVILGIKRPETSG"
     gene            819..1562
                     /locus_tag="QF359_10065"
     CDS             819..1562
                     /locus_tag="QF359_10065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87296.1"
                     /translation="MVSGLIKTVDLSKEYHLGDNVVHALQEVSIEIQKGEFLAIMGPS
                     GSGKSTAMNLIGCLDTPTSGQFFFDGIDVSELTSDNLAEIRNSKIGFVFQNFNLLART
                     SAFENVQLPLIYGGATRAERQVAAERVLIEVGLQDRMDHQPSQLSGGQQQRVAIARAL
                     VNDPSLILADEPTGALDTRTGIEIMALFQKLNDGGMTVIIVTHEADVAHFARRILRFQ
                     DGRVIKEEMNTERADAEKLLADFKPAEAT"
     gene            1571..>1739
                     /locus_tag="QF359_10070"
     CDS             1571..>1739
                     /locus_tag="QF359_10070"
                     /inference="COORDINATES: protein motif:HMM:NF024116.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO87297.1"
                     /translation="MDSVYSALGAIRVNVLRSVLTALGIIIGVAAVIIMIAVGAGAQS
                     KVDNLIKSLGSN"
BASE COUNT          437 a          425 c          482 g          395 t
ORIGIN      
        1 gatgcaggtc gaaaccaata tcgatgaagc ggatatcggc cagatcagac cgggccaaac
       61 agccactttc ggcgttgatt cttttcccgg ccaggagttc aaaggcatcg tcaatcaggt
      121 gcgtaaaaaa ccgcagacgg tgcaaaatgt ggtgacctac acggtcgtta tcgctgccaa
      181 taatgccgat ttaaaactct taccaggcat gacggcaaat gtgcaggtgc aggtcagtga
      241 ccgccgcaat gtcttgaaat tacccaatcg atcattgcgt tttgtgccac ccggcctgac
      301 gccgaaaccg caaaccgcgg gggctcaagc tggtcctggt ggcggcggta ccaggggagg
      361 tgctggaggc ggaccaccga atcgagaggc cagacgggca caagctcagg cgcgcatgaa
      421 gcgactggtc gaaaaagttg gtctcaccga agatcaacag caacaagttc gggatttcgg
      481 ccggcaaata ttccagcgaa ttcgcacgct ggcccaagga ggtcgcggtc cgggtttccg
      541 cgatgctatc cgcaaaatgc gccaagagaa tgataaacga atttttacga ttttgacgcc
      601 tgaacaaaaa gtaaaatacc gtttgatgat tgccgagcgc cgctccaatc cagtaacgcc
      661 agggagggtc tgggtgttgg aggacggcaa actaaaacaa gtcgacgtca tgatcggtgt
      721 tggtgacggc acgtcaactg aaatggttcg cggtgagtta aaagagggcc agcaggtaat
      781 tctcggcatt aagcgtccag aaaccagcgg ctaagctaat ggtgagtggt ctcataaaaa
      841 ctgtcgatct gtccaaggaa tatcaccttg gcgacaatgt cgtgcatgcc ttgcaagaag
      901 tttccatcga gattcagaag ggagaatttt tggcgatcat gggtccgtcg ggttctggaa
      961 aatcgacggc gatgaatctc atcggctgtc tcgatacacc gacttccgga cagttttttt
     1021 tcgacggcat tgatgtatct gagttgacct ccgacaatct ggcggaaatc cgaaactcca
     1081 agatcggctt tgtctttcaa aactttaatt tattggcacg gacgtcggca tttgaaaacg
     1141 ttcaattgcc gctgatatat ggtggtgcga cccgagccga gcgtcaggtg gccgccgagc
     1201 gtgtgctgat cgaagtcggt ctgcaagatc gcatggatca ccagccatcg caattatccg
     1261 gtggccaaca gcagcgtgtc gccattgccc gggcattggt caacgatcct tcgctgatat
     1321 tggccgacga accgaccggc gcgctggata ctcggaccgg cattgagatt atggcattgt
     1381 ttcaaaaact caatgacggc ggtatgacgg tgatcatcgt cacccatgag gctgatgttg
     1441 cccattttgc ccgtcgtatc ctgcgctttc aagatggccg ggtgatcaaa gaagaaatga
     1501 ataccgaacg cgccgatgcg gagaaattat tggcagactt caaacctgca gaggctacct
     1561 aatgacgtat atggattcag tttactcggc gctcggcgct attcgggtca atgttctccg
     1621 cagcgtttta acggcgcttg gtatcattat cggcgttgca gcagtaatta tcatgattgc
     1681 tgttggcgct ggcgctcaat ccaaagtcga caatctaatt aaaagcctgg gctcgaatc
//
LOCUS       DASCNL010000765         1301 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001577726, whole genome shotgun sequence.
ACCESSION   DASCNL010000765 DASCNL010000000
VERSION     DASCNL010000765.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1301)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1301)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001577726"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1037
                     /gene="hemH"
                     /locus_tag="QF359_10075"
     CDS             <1..1037
                     /gene="hemH"
                     /locus_tag="QF359_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HJO87298.1"
                     /translation="CSWNISWSGLMPKRAIVLFNLGGPDKPAAIQPFLFNLFNDPAII
                     SQPQPLRWFIANLISKRRAPIAQKIYAEIGGKSPLLNLTREQAAALKNRLGSETEVFI
                     SMRYWHPMSASTAKAVKNYNPDKIILLPLYPQFSTSTTGSSIDDWHQAARKIGLNKPT
                     TSICCYPAEINFVKAQASLLAEHLVPSSRVLFSAHGLPKKIIDGGDPYQWQVEQTAAA
                     IAAEAGLPDDQWRICYQSRVGRLEWIGPSLDEELEQAAADRIGVTILPITFVSEHSET
                     LVELDIEYRQLAEKLNLLAYNRVPAVGTQPDFITCLADLVASASTSGNNLITDQAERW
                     CPADRLCCPK"
     gene            1057..>1301
                     /locus_tag="QF359_10080"
     CDS             1057..>1301
                     /locus_tag="QF359_10080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008854570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HJO87299.1"
                     /translation="MMIELSSDAYLWIKALHIISVMAWMAGMLYLPRLFVYHCEAETG
                     SELSEKLKIMERRLLYAIITPAMIASLLFGSLLFLNL"
BASE COUNT          327 a          305 c          319 g          350 t
ORIGIN      
        1 cttgttcgtg gaacatcagt tggagcggct taatgccgaa gcgtgccatc gttttattta
       61 atcttggtgg gccggataaa ccagcggcga tacagccttt tctgtttaat ctgtttaatg
      121 acccggccat catcagccag ccacaaccgt tgcgttggtt tattgctaat ttaatttcaa
      181 agcgacgggc ccctatcgcg caaaaaattt acgccgagat tggtggcaaa tctccgttgc
      241 ttaatctcac gcgcgaacaa gcggctgcac tcaaaaaccg gcttggcagc gaaacggaag
      301 tttttatctc gatgcgctat tggcacccga tgagtgcgtc gacagcaaaa gcagtcaaaa
      361 attataaccc ggataaaatt attttgttgc cgctctatcc gcaattttca acatcgacta
      421 ccggatcatc tatagatgat tggcaccaag cagcccgtaa aattggcctt aataaaccaa
      481 ccacatcaat ttgctgctat ccggctgaaa ttaattttgt caaagcgcag gcgagtttgt
      541 tggcggaaca tcttgtaccg tcttcccgag tgttgttttc tgcccatggg ttgccgaaaa
      601 aaatcattga cgggggtgac ccctatcaat ggcaagttga gcaaaccgct gcggcgattg
      661 cggctgaagc tggtttgccc gatgaccagt ggcggatttg ttatcaaagc cgggtcggcc
      721 gcctcgaatg gatcggaccc tcgctggatg aagagctaga acaggcggca gccgatagga
      781 tcggtgtgac aattttgcct atcacttttg tctccgagca ttcggaaact ctggttgagt
      841 tagatattga atatcgccag cttgcggaaa aattaaacct actcgcctat aaccgggttc
      901 cggcggttgg gacgcagccg gattttatta cctgcctagc tgatctggtt gcaagcgcca
      961 gcaccagtgg gaataatttg ataactgatc aagcagagcg atggtgcccc gctgatcggc
     1021 tgtgctgtcc gaaataatag gcagaaaggc gctttaatga tgattgaact ttctagcgat
     1081 gcttatttgt ggatcaaggc ccttcatatc attagtgtaa tggcctggat ggcgggcatg
     1141 ctctatttac cacggctttt tgtataccat tgcgaagccg aaacaggctc agaattgtca
     1201 gaaaaactta aaattatgga gcgccgtctg ctctacgcaa tcataacgcc cgcaatgatc
     1261 gcctcactgc tatttggcag cttgttattt ttaaatttgg a
//
LOCUS       DASCNL010000766         2047 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001578147, whole genome shotgun sequence.
ACCESSION   DASCNL010000766 DASCNL010000000
VERSION     DASCNL010000766.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001578147"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="QF359_10085"
     CDS             <1..191
                     /locus_tag="QF359_10085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87300.1"
                     /translation="EGQIEKTMFQDVDTVKLNFEAWADAITGDADYPFTTEQKLQNIA
                     VLEAICQSAETGALITVQ"
     gene            375..1682
                     /locus_tag="QF359_10090"
     CDS             375..1682
                     /locus_tag="QF359_10090"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HJO87301.1"
                     /translation="MDTSFLQEEHHTNPRRLYSITGADWQLRVDHERLRAERLERARA
                     EMANDDLGALVVFAGANIRYITGSYQGNWKYNINIRYAVLCRDAEPVLFETAGSDMQC
                     AIIDLPWMKDRIRPAMTWQWAEGAVGEMADKMVASILDVLKENGVEKEKIGVDNFDMP
                     ALHAFEKAGLNVVNGWPAFSRARTVKTRDEIELLKQASSIGDAAMWHIKHEWLKPGVT
                     ERQIEAEVHKFMLDRGCEIIYDIIVASGGNTSPYRRWATDKIIQQGDLLIIDINAVGP
                     GGYYIDFVRCIKCAAKMTPAEIDLYRETYDSLYAGLENLKPGNTSADVVSKFPEYDDD
                     KYGTVTLQQFAHSIGITLYEGMWMSRAYSLKYPAEIKENMYFAIETFAGHPGLPQTCR
                     LEENVLVSKDGPVIFTKMEHMEEAVGDYRVGEFHHSSVDGRDH"
BASE COUNT          548 a          481 c          508 g          510 t
ORIGIN      
        1 aagaaggaca gatcgagaaa acgatgttcc aggatgtcga tacggtgaaa cttaattttg
       61 aagcctgggc cgatgcgatt acaggtgatg ccgactatcc ctttaccacg gaacagaagc
      121 tgcaaaatat tgccgttctt gaagctattt gtcagtcggc tgaaaccggt gcactgatta
      181 ccgttcagta accttaaatc aggtcagcaa cacactgaaa cgtgataaaa tggggtgtat
      241 tgctgcttga ttaacccccg ctagtacctt atgaaaacgt cttctataag actaaggtca
      301 agtcgataag aaaacagttt tagacaataa ttctgcctaa agaggagata cttatggggt
      361 atacgggata cgaaatggac acatcgttcc tgcaagagga acatcacaca aacccacgcc
      421 ggctttattc aattacgggt gcagactggc agcttcgtgt tgatcatgaa cgtctacggg
      481 ctgaacgcct cgagcgtgcc cgtgctgaaa tggccaatga tgatttgggg gctttagttg
      541 tgtttgcggg cgccaacatt cgctacatca ctggttccta tcagggtaac tggaaatata
      601 acatcaacat ccgttatgca gtcctctgcc gcgatgctga accggtattg ttcgaaaccg
      661 ctggttccga tatgcaatgc gcgatcatcg atctaccgtg gatgaaagac cgcatccgtc
      721 ccgccatgac ttggcaatgg gctgagggtg cggttggtga aatggctgat aaaatggtgg
      781 catcgatcct tgacgttttg aaagagaacg gcgttgagaa agagaaaatc ggtgttgata
      841 actttgatat gccggcgctt catgcctttg aaaaagccgg tctcaatgtg gttaacggct
      901 ggccagcttt ctcgcgggcg cggacggtta aaacccgtga cgagatcgaa ttgctcaagc
      961 aagcttcttc tattggtgat gccgcgatgt ggcacatcaa acatgagtgg ctgaaaccag
     1021 gtgtgaccga acgccagatc gaagccgaag ttcataaatt catgctcgat cgcggctgtg
     1081 aaatcattta tgacatcatc gtcgcttccg gtggcaacac ctcaccctat cgccgttggg
     1141 ccaccgataa aatcatccag cagggtgatt tgctgattat tgatattaac gccgtcggtc
     1201 caggaggtta ttacatagac tttgttcgct gtattaaatg cgccgccaaa atgactccgg
     1261 cggaaatcga tctttatcgt gaaacttatg actcgctcta tgctggtctg gaaaatctta
     1321 aaccgggtaa cacctcagct gacgtggttt ccaagttccc ggaatatgac gatgacaaat
     1381 acggcacggt gacgcttcaa caatttgctc actcgattgg catcacactt tacgaaggaa
     1441 tgtggatgtc ccgggcgtat tcactgaaat atccggctga gatcaaagaa aacatgtact
     1501 ttgcgattga aacctttgcc ggtcatcctg gcctgccgca gacctgccgt cttgaagaga
     1561 acgtactggt ttccaaagat ggaccggtca tttttaccaa aatggaacat atggaagaag
     1621 ctgtcggcga ctaccgcgtc ggcgaattcc accactcaag cgtcgacggc cgcgaccact
     1681 aaacctcgct tgttcaataa gttctcgaaa agccgctgca ggtaactgcg gcggtttttt
     1741 gttgagttct ctgtgtcctc tgtgggtttc acttcttcaa tgccccaaga ggggacactt
     1801 taggcgaccg ctttgaaggt cgataggatg tgccaaaaag gcatcccctt tttagtataa
     1861 aaatcttggc gaggtggagg gatttcgcta ggattccaaa caaataaaaa aataatcatt
     1921 ctcaggaagg acttcttaat gactgcgact aagccaccct atcgcgccga acatgtcggc
     1981 agctttatcc gtcccgataa attactcaac gccgcacggg ccaacaaagc gggcgatatc
     2041 gacaacg
//
LOCUS       DASCNL010000767         1092 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001578524, whole genome shotgun sequence.
ACCESSION   DASCNL010000767 DASCNL010000000
VERSION     DASCNL010000767.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001578524"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..806
                     /locus_tag="QF359_10095"
     CDS             <1..806
                     /locus_tag="QF359_10095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87302.1"
                     /translation="ACFGSHGDAPKVVMAAANIEDCFYSMITARQLAETFNMVVVVLT
                     DANLATAQQPIPRPEFSEEWLAPPVDQSAVPKDAKPYDWDPKTGLAPRFVPGRPDGMH
                     CLTGLAHDQNSKVIYDPEINEQAIEKRSLKLAALQKTLKPPPIFGGDQGDLLIIGWGS
                     TKGAIEEAIERVRADGFKASSVHLQFLQPLASGLKEIMDNFEKVVIVENSWSDKLENE
                     MIDENNRRFSNLAWLIRGRYLVDADCWSEVKGRPSKPGAIEQMIRDQLQ"
     gene            822..>1092
                     /locus_tag="QF359_10100"
     CDS             822..>1092
                     /locus_tag="QF359_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87303.1"
                     /translation="MTKNVAERLLGYDDEVFGVEHYQSDVMPRWCSGCGDNAILTAIQ
                     RLCRDEKLLPEKTMFVSGIGCSSRLPHYMNAYGFHGIHGRSLPVAE"
BASE COUNT          262 a          269 c          318 g          243 t
ORIGIN      
        1 cggcctgttt cggcagtcac ggcgatgcgc cgaaggtggt gatggcggcg gctaatatcg
       61 aggactgttt ctattcgatg atcacggcgc ggcaattggc ggaaactttt aatatggtcg
      121 ttgttgtgct taccgatgct aatttggcga ctgcccagca acccataccg cgtcctgaat
      181 tttctgagga atggctggcg ccaccggttg atcagagcgc cgttcccaaa gacgccaaac
      241 cctatgactg ggatcccaag accgggctcg ccccgcgctt tgttccgggc cgcccggacg
      301 gcatgcactg cctcaccggg ctcgcccatg atcagaacag caaggtaatt tatgatcccg
      361 agatcaacga gcaggcaatt gaaaaacgca gtcttaaatt ggccgctttg cagaaaaccc
      421 tgaaaccacc acccatattt gggggtgatc aaggtgactt gctgattatt ggctggggta
      481 gcaccaaagg cgccattgag gaggccatcg aacgcgtgcg cgcggacggc ttcaaagcat
      541 cttcggtcca tctccaattt ctgcaaccat tggcgtcggg tctaaaggaa ataatggaca
      601 attttgaaaa ggtcgtaata gtcgagaata gctggagcga caaattggaa aacgaaatga
      661 tcgatgaaaa caatcggcga ttctcgaacc tggcttggtt aatcaggggc cggtatctcg
      721 ttgatgccga ttgttggagc gaagtcaaag gccgcccgag taaaccaggg gcgatcgagc
      781 agatgatccg cgaccaactg cagtaagatg aggggaagac gatgacgaag aatgtggccg
      841 aacggctttt gggatatgac gatgaggtat ttggcgttga gcattatcag agcgacgtaa
      901 tgccacgatg gtgcagcggt tgcggcgaca acgctatcct taccgccatt cagcggttgt
      961 gccgcgatga gaagctgctg ccggaaaaaa ccatgtttgt ttccggcatc gggtgttcga
     1021 gtcggttgcc tcattatatg aacgcctatg gatttcacgg tattcatggc cgctctctcc
     1081 cggtcgccga gg
//
LOCUS       DASCNL010000768         1268 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001579506, whole genome shotgun sequence.
ACCESSION   DASCNL010000768 DASCNL010000000
VERSION     DASCNL010000768.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1268)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1268)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001579506"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            98..427
                     /locus_tag="QF359_10105"
     CDS             98..427
                     /locus_tag="QF359_10105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO87304.1"
                     /translation="MARNGLLIDYNYCTGCRSCEIACQQEHNYPAGQFGITVTEHILE
                     KKNGLSIYYLPFPTDLCNLCAHRTQDGAQPSCVKHCQARCMSFGPLTEMVAQMNEQPK
                     TVLYAPK"
     gene            442..>1268
                     /locus_tag="QF359_10110"
     CDS             442..>1268
                     /locus_tag="QF359_10110"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87305.1"
                     /translation="MNKMDDVKIVKTGAWSGGPGCHGGCGVDLHIKDGKLVKVEGNED
                     HPFHQGRLCPRALALTQYAYHEDRLQTPLKRVGERGSGEWAKISWDEALDECEYELRK
                     IRDEYGAESMVFGQGTGRDAGGPLIFMAYAYGSPNWTLFGLSGISCFTPRLAGMHTVA
                     GDITFPDAAQFSPERYDDPEYTPPEVMLHWARGIRGSQCTDHYFSGHYVVDMMKLGTK
                     LIVIDPRFSWAASRAELWLQIRPGTDGALALGMLNVIINENLYDKEFVEKWTHGFEEL
                     "
BASE COUNT          299 a          295 c          345 g          329 t
ORIGIN      
        1 cctaaattgt taaaatttat gaataccaag tttgacaata gtttcatatg aaactattgt
       61 acctactaac tgtttaaaaa agtttgagag gcctcagatg gcgcggaatg ggttgttgat
      121 cgattataat tattgcaccg gttgccgatc ctgtgagatc gcctgtcagc aggaacataa
      181 ttatcctgct ggccagtttg gcattacggt taccgagcat attcttgaga agaaaaacgg
      241 cctgtcgatt tactatctgc cgtttccaac tgatctttgt aatctctgcg cccaccggac
      301 ccaagacggt gctcaacctt cttgcgttaa acactgccag gcccgctgca tgagctttgg
      361 gccgctcaca gaaatggtcg ctcaaatgaa tgagcagccg aagaccgtac tctacgcgcc
      421 gaagtaaggg ggatatatta aatgaataag atggatgatg tgaaaattgt taaaaccggc
      481 gcgtggtcgg gtggacccgg gtgccatggc ggttgcggtg ttgatttgca tatcaaagac
      541 ggcaagctgg tcaaagttga aggcaacgag gatcacccgt ttcatcaggg ccggctttgt
      601 ccccgggcat tggcgctgac ccaatacgct tatcatgaag accggctgca aacgccgctg
      661 aagcgagttg gtgagagggg ttccggcgaa tgggcgaaaa tttcgtggga tgaagcgctc
      721 gacgagtgtg aatatgaatt gcgcaaaatc cgcgacgagt acggtgctga atcgatggtg
      781 ttcggtcaag gcaccgggcg cgatgccggt ggaccgctaa tctttatggc ttatgcctat
      841 ggcagtccta attggacttt atttggtctg tccggcattt catgttttac accgcgattg
      901 gccgggatgc acactgttgc cggtgatatt acatttcctg atgccgcgca gttttcaccc
      961 gagcgttacg atgatccaga atacacaccg cccgaggtga tgctgcactg ggcccggggt
     1021 attcgcggct cccaatgcac cgatcactat ttctccggcc attatgttgt cgacatgatg
     1081 aagctcggca ctaagttgat cgttatcgat ccgcgcttct cttgggcagc gtcccgggct
     1141 gagttgtggt tgcaaatccg tcctggcacc gatggtgcgc tggcgctcgg tatgctcaat
     1201 gttattatta acgagaacct ctacgataag gaattcgttg aaaaatggac ccacggtttt
     1261 gaggaact
//
LOCUS       DASCNL010000769         1179 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001581414, whole genome shotgun sequence.
ACCESSION   DASCNL010000769 DASCNL010000000
VERSION     DASCNL010000769.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001581414"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="QF359_10115"
     CDS             <1..651
                     /locus_tag="QF359_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HJO87306.1"
                     /translation="RQPVGEARGMDVHESQSLLIEMQACRSKEFITFAAPLMKAAFER
                     DGPEWEVDNLYRIYTKVAPGLIRVDADEVTYPAHVILRYQIERALINEEMTLDDLPAA
                     WNEAMHRLLGLIPPDHATGCMQDIHWFDGAWGYFPSYSLGAMTGAQIFATARNADPKI
                     LPAISEGDFTPLYDWLGEHIYGLGSLYETPELIERATGKPLDTEIFKHHLQTRYLT"
     gene            739..>1179
                     /locus_tag="QF359_10120"
     CDS             739..>1179
                     /locus_tag="QF359_10120"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247183.1"
                     /note="catalyzes the formation of L-threonine from
                     O-phospho-L-homoserine; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HJO87307.1"
                     /translation="MKYISTRSGAPDLAFDDVLLAGLARDGGLYVPESWPQFFDYDVR
                     DLRGLSYQELAIRIMLPFLGGTIPEDDFAEMVNDAYAQFDHPAIAPMKQLDDDMWIAE
                     LFHGPTLAFKDYPLQVVGRLFDYVLRKRGERVTIIGATSGDTGSA"
BASE COUNT          274 a          297 c          319 g          289 t
ORIGIN      
        1 cgccaaccgg tcggcgaagc ccgtggcatg gacgtccatg aaagtcagtc cctgctgatc
       61 gaaatgcagg cctgccgctc gaaggaattt atcacctttg ccgcgccgtt gatgaaagcg
      121 gccttcgaac gcgatggacc cgaatgggaa gttgataatc tctatcgtat ttacaccaaa
      181 gtagcacctg ggctcattcg agttgatgcc gatgaggtga cttatccggc gcatgtgatc
      241 ttacgctatc aaatagaacg cgccctcatc aatgaagaaa tgaccctgga tgatctgccc
      301 gccgcctgga acgaagcgat gcatagatta cttggtctga tcccgcccga tcacgccacc
      361 ggctgcatgc aggatatcca ttggtttgat ggcgcctggg gatatttccc gagctatagt
      421 ttaggcgcga tgacaggggc gcaaattttt gctacagccc ggaacgccga ccccaaaatt
      481 ctgcctgcca tcagcgaagg ggattttacc ccgctgtatg actggcttgg cgaacatatt
      541 tatggcctcg gatcgcttta tgaaacgccg gaactgattg agcgcgctac cggcaaaccg
      601 ctcgatacgg agatttttaa gcaccacttg cagacccgat atttgactta acgcaattga
      661 ggactggctt gcggcaggtc gcgccaagag atagtctacg ccaaattttc aggcacaatt
      721 tatattggag aaaccgcgtt gaaatatatc agcacccgtt caggtgctcc cgatttagct
      781 tttgatgacg tattgctggc cggcttggcc cgcgatggtg gcctttatgt gcctgaaagc
      841 tggccgcagt tttttgatta tgatgttcgc gacttgcgcg gcttaagtta tcaagaactg
      901 gcgatccgta tcatgctgcc atttttaggc ggcacaatcc ccgaagatga tttcgccgag
      961 atggtcaatg acgcttatgc tcaatttgat catccggcaa ttgcgccgat gaagcaattg
     1021 gatgacgata tgtggatcgc cgagctgttt cacgggccga cactggcgtt taaagactat
     1081 ccgctgcaag tggtcggcag actgtttgat tatgtgctga gaaaacgcgg tgaacgggtc
     1141 accattatcg gggcaacctc aggagatacg ggttcggcg
//
LOCUS       DASCNL010000770         5676 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001583955, whole genome shotgun sequence.
ACCESSION   DASCNL010000770 DASCNL010000000
VERSION     DASCNL010000770.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5676)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5676)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5676
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001583955"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(217..711)
                     /locus_tag="QF359_10125"
     CDS             complement(217..711)
                     /locus_tag="QF359_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87308.1"
                     /translation="MDFIETIRPTIPLAMRDILTAEVDYIMMGLLAETFWGGLEGNAE
                     FVAYLREVMRPDMGLTTGVNAEQAALSKFEVKNISVVSPYQPIDDEQVLRFFKETGFN
                     VISNIGLRCDTATSISHTPQKDVIQCVLNDLDGDNVEATAEAVYTNQRYNDLAFFPRP
                     RHQR"
     gene            1049..2200
                     /locus_tag="QF359_10130"
     CDS             1049..2200
                     /locus_tag="QF359_10130"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO87309.1"
                     /translation="MTENFEDIRSSVQALCAEFPGEYWRQLDAEKAYPTEFVKTMTEG
                     GFLGVLIPEEYDGSGLGLSAATAILEEIHKSGCNAAACHAQMYTMGTVLRHGSVAQKS
                     EYLPKIASGELRLQAFGVTEPTSGTDATRIKTTAAKDGDEYVVNGQKVWTSRVEHSDL
                     MLLLARTSSRQENAKRHEGMSVFLIDIREAVGNGLTIRPIPTMINHATTEVFFDDLHI
                     PASSLIGQEGKGFKYILDGMNAERILISSECIGDARWFIEKASNYARDRNVFGRAIAE
                     NQGVQFPIAKAYAASEAADLMVKKAAALFDAGEPCGAEANIAKMLAADASWQAADMCL
                     QTHGGFGFAEEYDVERKFRETRLYQIAPISTNLILSYIAEHVLGLPRSY"
     gene            complement(2235..4169)
                     /locus_tag="QF359_10135"
     CDS             complement(2235..4169)
                     /locus_tag="QF359_10135"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HJO87310.1"
                     /translation="MESVENTPTDSSNEAPAPPSPVARALTPWLGIALGLIGLLWASG
                     IAVDLGIDIIAEQVMVAVLGISFAIIFLNIPVHPKLQGTLPWYDAVAAVLGFAIGAYM
                     FYRYPVLLENIAYMPVEGTIVGVILVFLTVEALRRTAGWGLFAVLISFSVYGFLADLV
                     PGRLQGLAMKPGTFFSFLGIDTTGILGIPLTIITTVVIIFIFLGQVLLRSGGSKFFTD
                     IAAAIMGRSRGGSAKIAVVASGLFGSISGSAVSNVASTGVITIPLMRQGGYSRPVAGA
                     IEAVASTGGQIMPPIMGAAAFLMAELLEIRYQEVVIAAILPALLYYIAVFLQADLEAG
                     KTGIKPVPEDQIPPFLQVLKQGWYFIVPFAVLIYALFFLNSPPETAALFGAGSIVVLG
                     MLFKYKGKNLTVPTLIMCLRRTGEMSVDILVIGATAGMIIGILDATGLSFGLTFLLVQ
                     IGEGNLFLLLGLTAIICIILGMGMPTTAIYFLLAVLATPPLVKLGVEPLAAHLFVLYF
                     GLMSMITPPVALAAFTAAKLAETGPMGTAVAACRFGWPAFIVPFLFVVAPNLIMIGEP
                     IDIVIVFVTAIAGIWFASAGMTGFFTMKLSMVQRIAYIVGGLGLLLPSQAFTNAYLVE
                     IAGGVICGGVFALERMNKQI"
     gene            complement(4157..5110)
                     /locus_tag="QF359_10140"
     CDS             complement(4157..5110)
                     /locus_tag="QF359_10140"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HJO87311.1"
                     /translation="MNFIKVVALAGIAVLAAGPIAAQTVGIGTTKTGATSQVTAAIAS
                     VASKFGGMQMRPAPMAGTQKYIPAVNNGSLEFGAANIMQTAWAVKGQVLSKGHPNPNI
                     KIVSTLMVFRVGPLVGKKTKFQAVTDLKGARTPTGFKASPLFNELINASLATKSMTVA
                     DTKSVPISALVPSWKALMAGKIDFAIGAYGSGFMKRIAQKLGGIRFISLDNSAAVQAR
                     IGKLLPGATIRTVKPNPKIPGVEVPTNLFHFDYMLFAGKHVSNDVVYRVTKAMYENKK
                     ALVAATPMWRSFSPKKMSKDQGLAFHPGAAKFYKEKGTWNR"
     gene            5541..>5676
                     /locus_tag="QF359_10145"
     CDS             5541..>5676
                     /locus_tag="QF359_10145"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJO87312.1"
                     /translation="MTITTEERDPKLNGPLAGVRVIEMGQLLAGPFTTSRLADFGAEV
                     I"
BASE COUNT         1565 a         1313 c         1412 g         1386 t
ORIGIN      
        1 atcttgctca aagagcgcac ctggcgcggg cgcagcaatc agcaacgctc caacgagcag
       61 catcggggaa ttattgaggc gctaaagcag cgcgatccaa aatggtcgcg atccatcatg
      121 tatggacata ttatctcgac ccggcctctg ccttaatttt tcaggcctga gctcagggct
      181 tagtatctct caaacagcta gcctttgccg ataaatttat ctttgatgcc gagggcgcgg
      241 aaagaatgcc agatcgttgt aacgttgatt ggtatacacg gcttctgcag ttgcctcaac
      301 attatcgcca tcaagatcat tgaggacgca ttgaatgaca tctttttgtg gtgtgtgaga
      361 tatcgatgtg gcggtatcac atctgaggcc aatgttgcta attacgttaa atccggtttc
      421 tttaaagaac cgaagaacct gttcgtcatc gatcggttga taaggtgaca ccaccgaaat
      481 attcttaacc tcgaattttg acagcgccgc ctgctccgca ttgactcctg tggtgaggcc
      541 catatccggg cgcatgactt cgcgcaaata cgccacgaac tcagcattgc cttcaagacc
      601 accccagaaa gtttctgcta acagacccat cataatgtaa tcgacttcgg cggtaagaat
      661 gtcgcgcatg gccagtggga tggttgggcg gatggtttcg ataaaatcca taaacctgtc
      721 gttgctggtc ggttccggtt ggttgatcca aaaacgggaa aaatgctagg tcacgccttc
      781 gggaatgaag cgttggcaat catattcaac accggtgttg gtcgacggga taaccatgcc
      841 aatacggccg cgtgaaccaa tccagggttc ttgtggttta gtgagttcaa ctattggttc
      901 atttaatatc cctcctgaaa tctcccaaaa ggcgatatgt gcacagtatt ataaaaaaat
      961 tgtctaactc aatgactttt attcgatttg ccgccaggcc ggtaagtgta tagattggag
     1021 ctaattctgg tgatatggaa tccaatatat gactgaaaat tttgaagata ttcgctcatc
     1081 tgtgcaggct ctatgcgcag aatttcccgg cgaatattgg cgccaacttg atgctgaaaa
     1141 agcctatccc acggagtttg taaaaaccat gaccgaggga ggatttcttg gcgtcctgat
     1201 ccctgaagaa tatgatggca gtggacttgg tctctcggcg gcaacggcaa ttcttgagga
     1261 aatacataaa agcggctgca atgcagcagc ttgccacgcc cagatgtaca ccatgggaac
     1321 cgtcttacgc catggcagcg ttgcacagaa aagcgaatat ctgccgaaga ttgcctccgg
     1381 ggaattgcga ttgcaggcgt tcggcgtgac cgagccgaca agtgggacag acgcaacacg
     1441 aattaaaacg acggcggcga aagatggtga tgagtatgtc gtcaatggcc agaaagtttg
     1501 gacctcacgg gttgagcatt cagatttaat gctgctattg gcgaggacga gctcacgtca
     1561 agaaaacgct aaacgccacg aaggtatgtc ggtttttctg attgatattc gcgaggcggt
     1621 gggaaacggg ctaaccatcc ggcccattcc aaccatgatc aatcatgcga caacggaagt
     1681 tttcttcgat gatctccaca ttccagcgag ttctttgatt ggtcaggaag gtaagggctt
     1741 taaatatatt ctcgatggca tgaacgctga gcgcatattg atttcctctg aatgtattgg
     1801 cgatgcgcgc tggtttattg aaaaggcgtc gaactatgcc cgggaccgta atgtctttgg
     1861 ccgcgccatc gctgaaaatc agggagtgca attcccgatt gctaaagcct acgctgcctc
     1921 ggaagcagct gatctgatgg ttaaaaaagc agctgcacta tttgatgctg gcgagccctg
     1981 cggggcggag gctaatatag cgaaaatgct agctgctgac gcgtcgtggc aggcggctga
     2041 tatgtgtctg cagactcatg gtgggttcgg ttttgctgaa gagtatgatg tcgagcgaaa
     2101 attccgtgaa acccggctct accagattgc gccgatctca accaacctca ttttatctta
     2161 tatcgccgag catgtactcg gtctgccgcg atcttactga ggtttttgcc tattttgcga
     2221 cagtcgaaaa ttaactatat ctgcttgttc atacgctcca gagcgaaaac tccaccgcat
     2281 attacgccgc cggcaatctc aaccagataa gcgttggtga aagcctgcga tggcaggagc
     2341 aatcccaagc cgccgacgat ataagcaatc cgttgaacca tcgacagttt catcgtgaaa
     2401 aaacctgtca tgccggcaga ggcaaaccag ataccggcga tagcggtcac aaaaacaatt
     2461 acaatatcga tcggctcgcc aatcataatc agattaggcg cgacgacgaa caaaaatggg
     2521 acaataaagg ccggccagcc gaaacggcag gccgcgacgg ctgtacccat gggaccggtt
     2581 tcggcaagtt tagctgcggt aaaggccgcc aacgcgacgg gcggcgtaat catcgacatg
     2641 agaccgaaat aaagcacaaa caaatgagcg gctagaggtt caacaccaag ttttaccaat
     2701 ggcggtgtcg cgagaactgc aagtaagaaa tagatcgccg ttgtcggcat acccatgcca
     2761 agaatgatgc agatgatggc ggtgagaccc agcagcagga agagattacc ttcgccgatt
     2821 tggactaaaa gaaaagtcaa tccaaagcta aggccggtag catccagaat gccaataatc
     2881 atgccggcgg tggcgccaat gaccaggata tcaaccgaca tctcgccagt ccggcgcaaa
     2941 cacattatta gggttggcac cgtaaggttc ttgcctttgt atttaaacag cataccaaga
     3001 acgacaattg aaccggcgcc aaaaagtgca gccgtttccg gcggtgaatt caaaaagaaa
     3061 agggcataga tcagaactgc aaagggaaca ataaaatacc aaccttgttt taagacctgt
     3121 aggaaaggtg gaatttgatc ttctggcact ggttttatac ccgtttttcc ggcttccaga
     3181 tcggcctgca aaaagaccgc gatgtaataa agcagcgctg gcaggatggc ggcgataacg
     3241 acttcctggt atctgatttc cagcagctca gccattaaaa acgcggcagc gcccatgatc
     3301 ggcggcatga tctgcccgcc ggtagaggca actgcttcaa tggcgccggc aaccgggcgc
     3361 gaatatccgc cttggcgcat gagtggtatg gtgatgacgc cggttgaagc aacgttcgaa
     3421 accgcactgc ctgagattga accgaacagc ccagaagcga ccacggcaat tttagctgag
     3481 ccgccccggg agcggcccat aatggcggcc gcaatatcgg taaaaaattt agagccccct
     3541 gagcgcagca agacctggcc taaaaaaata aaaataatca cgacagttgt aataatggtc
     3601 agcgggatac ctaatatccc agttgtatca atgccaagaa aggaaaaaaa tgtgccgggt
     3661 ttcatcgcca gtccttgcaa gcggccagga acaaggtcgg caagaaatcc atagacagag
     3721 aaacttatta ataccgcgaa aagtccccaa ccggctgtac gtcgtaatgc ttcgactgtg
     3781 agaaaaacta gaataacccc aacaatcgta ccttcgaccg gcatataagc aatattttcg
     3841 agcagaaccg ggtagcgata aaacatatag gcaccaatcg cgaatccgag cacagccgcg
     3901 actgcatcat accacggtaa agtcccctga agttttggat ggaccggaat attaaggaaa
     3961 atgatggcga aggagatgcc gaggacggca accattacct gttcggcaat gatgtcgatg
     4021 ccgagatcaa cggcgatacc gctggcccaa agcaggccga ttaaaccgag cgcaataccg
     4081 agccaaggtg ttaacgcccg cgctaccggt gacggtggcg caggcgcttc attactagag
     4141 tcggtaggag tattttctac cgattccaag tacctttttc cttatagaat ttggcggcac
     4201 ctggatgaaa agcgagtcct tggtctttcg acattttctt tggtgaaaag ctccgccaca
     4261 ttggtgtcgc agcaaccaaa gcttttttat tttcgtacat tgctttggtg acccggtaga
     4321 caacatcgtt agagacgtgt ttgccggcaa acagcatata atcaaagtgg aaaagatttg
     4381 ttggtacttc gacacccggg atttttggat ttggtttaac ggtcctaatc gtggcgcccg
     4441 gaagtagctt gccgatccgc gcctgaacgg cggctgaatt atctagcgag ataaaacgaa
     4501 tgccgccaag tttttgggca atccgtttca tgaagccgga gccgtaagcg ccgatggcaa
     4561 aatcaatttt gccggccatc aaagctttcc agcttggcac gagagcggaa atcggcacag
     4621 atttcgtatc tgcaacggtc attgatttgg ttgccaagga ggcattaatt aattcattga
     4681 acaatggaga tgctttaaat ccggtaggcg tacgcgcgcc ttttaaatca gtgaccgctt
     4741 gaaacttggt ttttttgccg accagtgggc cgacgcgaaa taccatcagt gtagaaacga
     4801 ttttgatatt tggatttggg tgaccttttg ataagacctg accttttacc gcccaggccg
     4861 tctgcataat attggcagcg ccgaactcaa gcgagccatt atttactgcc ggaatatatt
     4921 tttgcgtgcc ggccatcggt gccgggcgca tttgcatgcc accaaatttt gaagcaacgc
     4981 tggcgatagc tgctgtgact tgactggtgg cgccggtttt ggtggtgccg ataccgaccg
     5041 tctgggcggc aatcggaccg gctgcgagta cagcaatacc ggcaagtgct actactttga
     5101 taaagttcat ttgtgattcc tccttgaaat tttgtttggt tgttttctaa cttttcttat
     5161 ttttgacaat tctattactc aatcgcgcta tataggtaca ctttatcgat aaatgtgacg
     5221 taaccgcaat tgatcaatac aattttctaa taggtacatt aaaaaagatt acacaggtcg
     5281 ccctcaaatt caaagactga tttagcatat taggttttta gatttagcat atttgtaatt
     5341 aaattgtaca caatataaat cttgattttt taaaatattt attatttgtg gccaaaaaat
     5401 aacaaaattg aaattatata tttaaaaaat ttaaataatt gtacacaata atctagttct
     5461 gacgttaaat aattgctacc aattgagcca attaggcatc atcctgctga acgataaaat
     5521 ttaattttgg agaatttctg atgaccatta ccacagaaga acgggatccc aaactcaatg
     5581 gcccccttgc tggcgtgcgg gtgattgaga tggggcaatt gttggcaggt ccgtttacga
     5641 cgtcgcgact agcggatttt ggcgccgagg tgatca
//
LOCUS       DASCNL010000771         1745 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001587030, whole genome shotgun sequence.
ACCESSION   DASCNL010000771 DASCNL010000000
VERSION     DASCNL010000771.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001587030"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            148..1065
                     /locus_tag="QF359_10150"
     CDS             148..1065
                     /locus_tag="QF359_10150"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87313.1"
                     /translation="MNQPASSHGIALSTTYLLAAGLTIFSNLFFISSHGIVRHIGPEL
                     HPFEIAFFSNLFSALFYIPWFFKIGLTPLKTTKLPLHIVRACFNAGALITWYTALSLV
                     PLADAVALGLIGPLFVTVGAMLFLGEKIRRRRWIALGVGIIGALVIIRPGFAVVSIGF
                     IFVILSAASSAGTKLFAKYLSRTDSAVTCSALVAILQTPISFCLALFVWRTPNLEQLA
                     WLAGTGVFVSMAHLTMVQAFKYSEVSALEPLVFIRLIWAALIGFFVFSEFPGLWTWIG
                     AAIIVSASTYIAHRESRLNKPGPSPSPLS"
     gene            1122..>1745
                     /locus_tag="QF359_10155"
     CDS             1122..>1745
                     /locus_tag="QF359_10155"
                     /inference="COORDINATES: protein motif:HMM:NF024758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HJO87314.1"
                     /translation="MSEIKRVNGHRPSGLLHLLDPSLKLAPHPRQEELNFDLGQALSS
                     VVRLTSEVPEDAFSAQTLGTEREGNAILISDDGLLLTIGYLVVDARLITIKAAGGDLL
                     QAELVGYNHESGMAIIHALSPLDITPLEIGGAEDLDEEEPVIIAPYGGVDHAISAVVV
                     SRREFAGSWEYMLDRAIFTVPIHPNWSGAALIRGDGRLCGLGSLWVND"
BASE COUNT          365 a          439 c          418 g          523 t
ORIGIN      
        1 tacaacttca tggttggtgt tattgtagat ttttaactac tttcaaattt aaaattcata
       61 ggtaaggcga catcttccga tgtcgccttt caaatgtatc accctgctgt taggctcaaa
      121 tctcgtaaat atccacgagt tttattgatg aaccagcctg cctcctcgca cggaattgcg
      181 ttgtccacga cctacttact tgctgccggc ttgacaattt tcagcaattt gttcttcatt
      241 tcctctcacg gtattgttcg ccacattggc ccggaacttc acccatttga gatcgctttt
      301 ttctccaact tattttcagc gttgttttat attccgtggt tttttaagat cggcttgacg
      361 ccgcttaaga caactaagct cccactccat atagtccgcg cctgtttcaa cgctggtgca
      421 ttaataacct ggtacaccgc attgtctttg gtgcctcttg ccgatgcagt cgccttggga
      481 ttgatcggac cactttttgt gaccgtcggc gcgatgttat ttctcggtga gaaaatccgt
      541 cgacgccgct ggatcgctct cggagttggt attattggtg ccttggttat tattcggcca
      601 ggatttgcgg tggtaagcat cggcttcata tttgtcattc tatctgccgc cagcagtgcc
      661 ggaactaaac ttttcgccaa gtatttatct cgtactgaca gtgccgtcac ctgcagtgcc
      721 ttggtcgcta ttttgcagac cccaatttct ttttgcctag cactttttgt ctggcgcaca
      781 ccgaacctgg agcaactggc ttggctggcc ggaaccggcg tatttgtctc catggcacac
      841 ctgactatgg tgcaggcctt caaatatagc gaagttagcg ctttggagcc acttgttttt
      901 atccggctta tctgggccgc ccttatcggc tttttcgtct ttagcgaatt tccaggtctc
      961 tggacttgga ttggggcagc aattattgtc tcggcatcaa cctacatcgc gcatcgagaa
     1021 tcacggttga ataaaccggg gccttcaccc tcgccactca gttgagagcc tgttagacta
     1081 aattcattgt tcgactagat ttgaaatgaa aagattaagg aatgtcggaa ataaaacgcg
     1141 ttaatggaca ccgcccgagt ggtctcctcc accttttaga tccttcgtta aaactggctc
     1201 ctcacccgag acaggaagaa cttaattttg atctcgggca agcgttgtca tcggtcgttc
     1261 gtcttacttc agaagttccc gaagatgcct ttagcgccca aaccctaggt accgaacgcg
     1321 aaggtaatgc gatcctgatc agcgatgacg gcctgctgct gaccatcggc tatttggtcg
     1381 ttgatgcgcg cttgatcacg atcaaagccg ccggtggcga tctgctacaa gcggaattgg
     1441 ttggttataa tcatgagtct ggcatggcga ttattcatgc gttatcgccg ctcgacatta
     1501 cccctttgga aattggcggt gcagaagatt tagacgagga agaaccagtg atcatcgctc
     1561 cctacggcgg ggttgatcat gcgatcagcg ccgtcgtggt gtcgcgccgc gaatttgccg
     1621 gctcatggga atatatgttg gatcgcgcaa tctttactgt gccaatccac cccaattgga
     1681 gtggcgcagc gcttattcgc ggcgatggca ggttgtgcgg cttgggatct ctctgggtta
     1741 atgat
//
LOCUS       DASCNL010000772         3826 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001589912, whole genome shotgun sequence.
ACCESSION   DASCNL010000772 DASCNL010000000
VERSION     DASCNL010000772.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3826)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3826)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3826
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001589912"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="QF359_10160"
     CDS             complement(<1..205)
                     /locus_tag="QF359_10160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87315.1"
                     /translation="MVTFDQKDIVATLIKALPVAVAVVDQDGRIGPGNIAFQKLWQLE
                     AGHLDGQPTLSTFLDKLNDQRQLP"
     gene            complement(277..1563)
                     /gene="ahcY"
                     /locus_tag="QF359_10165"
     CDS             complement(277..1563)
                     /gene="ahcY"
                     /locus_tag="QF359_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HJO87316.1"
                     /translation="MSDYKVADISLADWGRKEIAIAETEMPGLMALCEEYAGKKPLKG
                     ARIAGCLHMTIQTAVLMETLVDLGAELRWSSCNIFSTQDHAAATMAEAGIPTFAWKGE
                     TDEEFWWCIDQTIHGPDGWVPNMILDDGGDLTQVMHEKTPELLADVKGLSEETTTGVH
                     RLYEMEKDGSLKVPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMVAGKCAVVAG
                     FGDVGKGSAASLRNQGARVLVTEIDPICALQASMEGYEVVTMDEAAPIGDIFVTTTGN
                     IDIITLDHMRDMKDRAIVSNIGHFDSEIQVKALRNYKWHNVKPQVDEIEFPNGKRIIL
                     LAEGRLVNLGCATGHPSFVMSASFTNQVLAQIELWENAQSYENKVYVLPKNLDEKVAT
                     LHLKKLNVRLTELTKEQADYISVSQAGPFKPDHYRY"
     gene            complement(1702..1968)
                     /locus_tag="QF359_10170"
     CDS             complement(1702..1968)
                     /locus_tag="QF359_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HJO87317.1"
                     /translation="MSEATLTICNECGLHARAAARFVKLVSEFDAEVLVTKDGQEVSG
                     LSIMGLMMLAAAPGDKIAVRTSGKDEKSVLKAIEKLVKNKFEES"
     gene            complement(1989..2393)
                     /locus_tag="QF359_10175"
     CDS             complement(1989..2393)
                     /locus_tag="QF359_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HJO87318.1"
                     /translation="MIGLVLVTHGHLADELIAAMEHVVGPQEKVAAICIGADDDMEQH
                     RMNILNVVKEVSSDDGVVLLTDMFGGTPSNLAISVMDRANAEVIAGVNLPMLVKFASC
                     RDQCDLEECVTKAQEAGKKYINVASQLLAKDK"
     gene            complement(2409..3296)
                     /gene="rapZ"
                     /locus_tag="QF359_10180"
     CDS             complement(2409..3296)
                     /gene="rapZ"
                     /locus_tag="QF359_10180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HJO87319.1"
                     /translation="MISQWQEKVLAVIVTGMSGAGKSSALKALEDLNFEAIDNVPLSM
                     LEAIITDSHLQLSTPGFGRPVAVGVDIRTRDFGVDIFLNHLDQITNSFDIHAHILFVD
                     CDDDVLLRRYEETRHRHPMAMDRPVADGIQRERKLVSPLRQRADLVIDTTAIGPGELK
                     TILQAQFAEDAKNELTVFVTSFSYRKGLPREADLVFDTRFLRNPHYESKLRELSGRDE
                     TVGVYLKADDAYEPFFGNLTQMLKPLMPRFKAEGKSYLTIAIGCTGGRHRSVFVAEQL
                     AKWFDKAGLQAQLNHRDLE"
     gene            complement(3293..3727)
                     /locus_tag="QF359_10185"
     CDS             complement(3293..3727)
                     /locus_tag="QF359_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphatase C-terminal
                     domain-containing protein"
                     /protein_id="HJO87320.1"
                     /translation="MTQLHATAIAIEGQGVLIRGPSNSGKSDLALRLIDDGAQLVADD
                     RVNVACVENYLNISAPDNLKGLIEVRGVGVVKISAVDKAALKLIIDLKPGTDIERLPE
                     PREETLEGVAVLVLELNPFEVSAVAKIKMALRIQEGKVTLIE"
BASE COUNT          965 a         1006 c          858 g          997 t
ORIGIN      
        1 ccggcaattg gcgctgatca ttcagcttgt ccaaaaaagt agacagggtt ggttggccgt
       61 caagatgacc cgcttccaac tgccacaatt tttgaaaagc gatattgccg ggcccaatcc
      121 gcccgtcctg atccaccact gccaccgcaa ccggcagcgc ctttatcagc gttgcaacga
      181 tatctttttg atcaaacgta accacaaata aattttaggc ctctctgctc accgtaacaa
      241 gtgggctgac aagcctaaaa cgaattcaat tagatgttaa taccggtaat gatccggttt
      301 aaacggtccg gcttgcgaga cgctgatata gtcggcctgc tctttggtca gttcggtcag
      361 gcggacattg agctttttga gatgcaaggt cgcgactttt tcgtccaaat tcttcggcaa
      421 tacatagact ttattttcat aagactgagc gttttcccaa agctcgatct gcgccagcac
      481 ctgattggtg aatgatgccg acatgacaaa gcttggatgg cctgtcgcgc aacccaaatt
      541 caccaggcgg ccttccgcca atagaataat ccgcttaccg ttcgggaatt caatttcatc
      601 gacctgtggc ttcacattgt gccatttgta attacgtagt gccttgactt gaatttcaga
      661 atcaaaatgg ccgatattcg agacaatcgc ccggtctttc atgtcacgca tatgatcaag
      721 tgtaataatg tcaatattgc cggtcgtggt aacaaaaata tcaccaattg gcgccgcttc
      781 atccatggta acgacttcat agccttccat cgaagcttgc agtgcacaaa tcggatcaat
      841 ctcggtgacc agcacgcgag caccctgatt acggagcgag gcggcagagc ctttaccgac
      901 atcgccaaaa ccggcaacga cggcgcattt accggccacc atcacatcgg ttgcacgctt
      961 aatgccatcg accaggcttt cacggcagcc atagagatta tcaaacttag atttagttac
     1021 tgaatcattg acattaaagg cgggcacttt caaggaaccg tctttttcca tttcataaag
     1081 ccgatgcaca ccggtcgtgg tttcttcgga aagaccttta acatcggcca gcagttccgg
     1141 cgttttttca tgcatcactt gagtgagatc accgccatca tccaaaatca tgttcggcac
     1201 ccagccatcg ggaccatgaa tagtctgatc aatacaccac cagaattctt catccgtttc
     1261 acctttccag gcaaaagttg ggatgcccgc ttcagccata gtggcggcgg cgtgatcctg
     1321 agtagaaaaa atgttgcagg acgaccagcg cagctctgca cccaaatcaa ccagggtttc
     1381 catcaggaca gccgtctgaa tggtcatatg caggcagccg gcaatcctgg cgcctttgag
     1441 gggttttttg ccggcatatt cttcacacag cgccatcaat cccggcattt cggtttcagc
     1501 gatcgcgatt tctttacggc cccaatcggc taaagaaata tcggcaactt tataatcaga
     1561 cattcgattc tcctgagatg gcaggtaatt ttggaatttg ccactagatt ttgatgggat
     1621 gtatcagtca atatctctgt atacaagaac taagatgtat cgctgaaatt tcaagttatt
     1681 tggccaaaat aatgcccaat cctaactttc ttcaaacttg tttttgacta gtttctcaat
     1741 tgctttcaga acagatttct cgtcttttcc ggatgttctg acggcaatct tgtcgccagg
     1801 ggcggcggca agcatcatca gccccatgat cgacaagccg gacacttcct gaccatcttt
     1861 ggtcaccagc acttcggcat caaattcact gacgagtttg acaaatctcg ccgccgcccg
     1921 cgcatgcaga ccgcactcat tacagattgt cagagtggct tcactcacca gcttaatcca
     1981 cccaattgtt atttgtcttt ggcgagaagt tgtgaggcaa cattgatgta tttcttgccg
     2041 gcctcttgcg ctttagtgac gcattcttcg agatcgcatt gatcgcgaca actggcaaat
     2101 ttaaccagca ttggcagatt gacgccggca atgacctcgg cattagcccg atccattacc
     2161 gaaatcgcca gatttgaggg agtcccgccg aacatatcgg ttaacaggac aactccatcg
     2221 tccgagctaa cctctttgac cacattcaaa atattcatcc ggtgctgttc catatcgtca
     2281 tctgcgccaa tacagatcgc agcgactttt tcctgcgggc caacaacatg ttccattgcg
     2341 gcaataagct catccgctaa atgaccatga gtgactagaa ccaaaccgat catcgttaga
     2401 ttgaatcctt actctaaatc ccggtgattt aattgcgcct gcaggcctgc tttgtcaaac
     2461 cactttgcaa gctgttcggc aacgaaaact gaccggtgac ggccaccagt gcagccaatc
     2521 gcgatggtta aatagctttt accttcggct ttaaagcgtg gcatcaaagg tttaagcatt
     2581 tgagtgagat ttccaaaaaa aggttcgtag gcatcatctg cttttaaata taccccgaca
     2641 gtctcatccc taccacttag ctcgcgcagt ttactttcat aatgtggatt gcgtagaaac
     2701 cgcgtgtcaa aaaccagatc agcctctcgc ggtaatcctt tgcggtaaga aaaagacgtt
     2761 acaaagaccg taagctcgtt tttagcatcc tcggcaaatt gtgcttgcag gatggtttta
     2821 agctcaccgg gcccaattgc cgtggtgtcg ataaccagat cagcccgctg acgtaagggc
     2881 gagaccagtt tgcgttcgcg ctgaatgcca tcggcgaccg ggcggtccat cgccatcgga
     2941 tgacggtggc gggtttcttc atagcggcgc agcaagacat cgtcatcaca atcaacaaaa
     3001 agaatatggg catggatatc aaagctattg gtgatttgat ccaaatgatt taggaatata
     3061 tcgacgccaa aatcgcgggt ccgaatatcg acacctaccg ccaccggacg cccaaacccg
     3121 ggggtgctga gctgcaagtg gctatcggta attatggctt ctagcattga tagcggcaca
     3181 ttgtcgatgg cttcgaaatt tagatcttcc aacgctttca gcgccgaaga cttgccggca
     3241 cccgacatgc cagtaactat aactgccaga actttctcct gccactgtga tatcattcga
     3301 tcaaggtgac ctttccttct tgaatccgca acgccatttt tattttggcc acagcagaaa
     3361 cctcgaacgg gttgagttca agaaccagga cggcgacacc ctcaagggtt tcttctcttg
     3421 gttccggcag gcgctcaata tccgtccccg gttttaaatc gataattagt ttaagtgccg
     3481 ctttatcaac ggcactgatt ttgaccacac cgacgccgcg cacttcgata aggcctttaa
     3541 ggttgtcggg tgcggaaatg tttaagtaat tttcgacgca cgcaacattg acccggtcat
     3601 ccgccaccag ttgtgcgcca tcatcaatca gccgcaaggc caaatcggat ttgccgctgt
     3661 ttgacggccc acggattaat acgccttgcc cttctatggc gatggcagtt gcatgaagct
     3721 gggtcatggg ggagagatta ctctgcttgt ggcaggtgga caataaagca ggcaccggtt
     3781 attttgccct cttcattgac gttgttttga gcggatattt caccac
//
LOCUS       DASCNL010000773         3002 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001593607, whole genome shotgun sequence.
ACCESSION   DASCNL010000773 DASCNL010000000
VERSION     DASCNL010000773.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001593607"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="QF359_10190"
     CDS             complement(<1..251)
                     /locus_tag="QF359_10190"
                     /inference="COORDINATES: protein motif:HMM:NF023010.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3237 family protein"
                     /protein_id="HJO87321.1"
                     /translation="MELQHAFDAAITLAPIKDLGDTPIGHRRIIDITGGTVSGPKLQG
                     KVLPGGADWQYIRDDNVTYLDARYTIETDDGALIYVNNQG"
     gene            complement(254..667)
                     /locus_tag="QF359_10195"
     CDS             complement(254..667)
                     /locus_tag="QF359_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87322.1"
                     /translation="MYNTNPPFGIFLIVIAMMFNATKDSITKMLATSYTPLTILLIPF
                     LSFYWVAPKMEDITILIGFTSLATIGQILMVGSFSFAAATIIAPFVYTQIIWATSVGF
                     FTVWCLAGSMELDRIVSVAVAGFYIAIREIKLKEG"
     gene            complement(742..1245)
                     /locus_tag="QF359_10200"
     CDS             complement(742..1245)
                     /locus_tag="QF359_10200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HJO87323.1"
                     /translation="MSLELKLQKLSRESFAPFGDVIETNGAEHLIINEGTTERFHDLA
                     NIDIRREGGKPLINIFRGSPRPQPIEIKMMERHPLGSQTFMPLQNTPYLVVVAPIGDS
                     VGPEDLQAFEAAGHQGVNYKLDLWHHPLLVLEDGHEFLVIDRDGSGENCTEHWFTADQ
                     GIAQIAL"
     gene            complement(1235..1492)
                     /locus_tag="QF359_10205"
     CDS             complement(1235..1492)
                     /locus_tag="QF359_10205"
                     /inference="COORDINATES: protein motif:HMM:NF015522.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87324.1"
                     /translation="MTTQKTELPTFTKGAINLASPRIGADVIYATDEFFAPKNRLLNA
                     DSHNFFENTLKARFNYLRLNIYSDGGISRFRVLEKMTRNES"
     gene            complement(1505..2026)
                     /gene="uraD"
                     /locus_tag="QF359_10210"
     CDS             complement(1505..2026)
                     /gene="uraD"
                     /locus_tag="QF359_10210"
                     /EC_number="4.1.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
                     decarboxylase"
                     /protein_id="HJO87325.1"
                     /translation="MTAAYQTNVPSRMTRPDFTRVFGGVYEHSPWIAEQAFDKGLTKI
                     HNNAEELHFALATEVEEAVKERQLALLCAHPDLAGKLAMRGELTEESTSEQASADLGN
                     CTAEEYEAFQSLNDRYKEKFGFPFILAVRGYHRTEILEIFKQRVDNDAEIEFDEALTQ
                     IHRIARLRLNEIE"
     gene            complement(2030..2968)
                     /gene="puuE"
                     /locus_tag="QF359_10215"
     CDS             complement(2030..2968)
                     /gene="puuE"
                     /locus_tag="QF359_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0000256 - allantoin catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase PuuE"
                     /protein_id="HJO87326.1"
                     /translation="MSEGFIAADFKRYPRDLIGYGADKPHADWPDGARIALQFVVNYE
                     EGGENCILHGDEASEAFLSEITADAREGVRHMSMESFYEYGSRVGVWRLFNLFKDFEI
                     PVTIFAIAMALQRNPDVVEAALKNNFELCSHGYRWIDYQYLPENIEKEHLYKAIEIHT
                     EVTGERPLGWYTGRTSPNTRRLIAEEGGFLYDADDYSDELPFWSKTVDQPHLIVPYSL
                     DANDMRFAATAGFTAGDQFYNYLKNSFDTLYDEGETAPKMMSIGLHCRVVGRPGRFQA
                     LKKFVEYARSRDKVWFCRRVDIARHWREHHPYTEAA"
BASE COUNT          766 a          730 c          724 g          782 t
ORIGIN      
        1 ccttgattgt tgacatagat cagggcgccg tcatcggttt caatggtgta gcgggcatcg
       61 agataggtga cgttgtcgtc ccggatatat tgccaatcag cgccaccggg cagaactttt
      121 ccttgcagct taggaccgct gaccgtgccg ccagtaatat caataatgcg gcgatggcca
      181 atgggagtgt cacccaaatc tttaatcggt gcgagagtga tcgcggcatc gaaagcatgt
      241 tgcaattcca tcgctagcct tccttaagtt taatctctct gatggcaata taaaaacccg
      301 ccacggcgac actaacaatc ctatccagct ccattgatcc ggcaaggcac caaacagtaa
      361 aaaatccgac actggtcgcc caaattatct gggtatagac aaacggcgcg ataatggtgg
      421 cggcggcaaa actgaaggaa ccgaccatta atatctggcc aatggtggca agcgaagtaa
      481 aaccaatcag gatagtaata tcctccatct tcggcgctac ccaataaaaa cttaagaacg
      541 gaataagcaa aatcgttagt ggcgtataac tcgtggctag cattttggtg atgctgtctt
      601 tggtcgcatt gaacatcatc gctatgacta taagaaaaat gccaaaagga gggttggtgt
      661 tgtacatacg cccgtcatat ctaaaacgga ccgcttgtcg accgctaatc gttccgctcg
      721 gggtaggtcg gcctatacgc gttaaagcgc tatttgagca ataccttgat ctgcggtaaa
      781 ccaatgctct gtgcaatttt cgccactgcc atcgcgatca atcaccagaa attcgtgacc
      841 atcttccaag accagtaatg gatggtgcca gaggtcgagt ttgtaattaa ccccttgatg
      901 gccggcagcc tcaaaagcct gtaaatcctc tggcccaacg ctgtcgccaa ttggtgcaac
      961 gacgacaaga tagggtgtat tctgtaacgg catgaaagtt tgcgagccca agggatggcg
     1021 ttccatcatt ttaatctcaa ttggttgcgg tcgcgggctg ccacgaaaaa tattaatcaa
     1081 tggtttgcct ccttccctcc tgatatcgat attggcgaga tcatgaaaac gttcggtggt
     1141 gccctcattg ataatcagat gctcggcacc gttggtttca ataacgtcac caaatggtgc
     1201 aaatgattct cgagacagct tttgcagttt tagttcaaga ctcatttctg gtcatctttt
     1261 ccaacactct aaagcggctg ataccgccat ccgagtaaat attgaggcgc aaatagttaa
     1321 aacgggcttt taaggtgttt tcaaaaaaat tgtgtgagtc ggcattgagt agccggtttt
     1381 tgggtgcaaa gaattcatct gttgcataaa tcacgtctgc tccgatacgc ggcgaagcca
     1441 aattgatggc gcctttagta aaggtcggca gttcagtttt ttgggtggtc atttgttcaa
     1501 tatcctactc aatctcattt aagcgaagcc gggcgatccg atggatctgc gtcaaggctt
     1561 catcaaattc tatttctgca tcattatcga cgcgttgttt gaagatttcg agaatttccg
     1621 tccggtgata acctcgcact gcgagaataa acggaaatcc aaatttttcc ttatatcgat
     1681 cattgagact ctgaaaggct tcatattcct cggcggtaca attgccgaga tcggcgctcg
     1741 cttgttcaga agtggattct tcagttaatt cgccgcgcat ggcaagcttg ccggccaaat
     1801 ctggatgagc acataaaagt gcgagttgtc gttctttaac ggcttcctcg acttcggttg
     1861 ccagcgcgaa atgtaattct tcagcattgt tatgaatttt cgtcaggcct ttgtcaaaag
     1921 cctgttcagc aatccacggc gaatgttcat aaacgccacc aaacactctg gtaaagtcag
     1981 ggcgtgtcat acggctgggt acattggtct gataggcggc tgtcatattt taggccgcct
     2041 ctgtgtacgg atggtgctca cgccaatgac gggcgatatc gacgcggcga cagaaccaaa
     2101 ccttgtcacg tgagcgggca tattcgacaa atttcttgag cgcctgaaat cgccccggcc
     2161 ggccaacaac gcggcagtgc aggccaatcg acatcatttt cggtgcggtc tcgccctcat
     2221 cgtacagtgt atcgaaactg tttttaagat aattgtagaa ctgatcgccg gcggtaaaac
     2281 ctgctgtggc ggcaaagcgc atgtcatttg cgtccagcga gtaggggaca attaaatgcg
     2341 gttggtcgac ggtcttagac cagaacggca gttcatctga ataatcatcg gcgtcataca
     2401 aaaagccgcc ttcctcggca atgagccgcc ttgtattggg gctggtgcgg ccggtatacc
     2461 agccgagcgg ccgttcaccc gtaacttcgg tatgaatttc gatggctttg tagagatgtt
     2521 ctttctcaat gttttccggc aagtattgat aatctatcca gcgatagcca tgactgcaaa
     2581 gctcaaagtt atttttaaga gccgcctcga cgacatccgg gttgcgttgc agcgccatcg
     2641 cgatggcaaa gatggtcacc ggaatttcaa aatctttaaa cagattgaat aaacgccaaa
     2701 caccgacgcg gctgccatat tcatagaagc tctccatact catatggcgc acaccctccc
     2761 gtgcatctgc cgttatttcc gatagaaatg cctcggaggc ctcatcgcca tgcaggatgc
     2821 agttttcgcc gccttcttca taattgacga caaattggag ggcgatgcgc gcaccatctg
     2881 gccagtcagc gtgcggttta tctgcgccat atccaataag atcacgggga taacgtttaa
     2941 aatcggcagc aataaagcct tcagacattt gtttatcctt ctcaagcagt tgcgcgggct
     3001 tc
//
LOCUS       DASCNL010000774         1331 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001595244, whole genome shotgun sequence.
ACCESSION   DASCNL010000774 DASCNL010000000
VERSION     DASCNL010000774.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1331)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1331)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001595244"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="QF359_10220"
     CDS             <1..362
                     /locus_tag="QF359_10220"
                     /inference="COORDINATES: protein motif:HMM:NF024860.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HJO87327.1"
                     /translation="CYSQNFTDPVPWTNDLLSIGNYFNQYQSLMAHWENYLPVPAFTL
                     DYENLVADFANQAKRIIEYIGLDWDENCLKFYESEGAVQTASSTQVREPIYTHSIGRW
                     QLYAEQLKPLIEVLELD"
     gene            393..518
                     /locus_tag="QF359_10225"
     CDS             393..518
                     /locus_tag="QF359_10225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87328.1"
                     /translation="MPLVGHATEMHSNVRVTNGFTGFFEFEIALVDIGSEITFVD"
     gene            complement(528..659)
                     /locus_tag="QF359_10230"
                     /pseudo
     CDS             complement(528..659)
                     /locus_tag="QF359_10230"
                     /inference="COORDINATES: protein motif:HMM:TIGR02097.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemimethylated DNA-binding YccV-like
                     domain-containing protein"
     gene            837..>1331
                     /locus_tag="QF359_10235"
     CDS             837..>1331
                     /locus_tag="QF359_10235"
                     /inference="COORDINATES: protein motif:HMM:NF018017.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ELM1/GtrOC1 family putative glycosyltransferase"
                     /protein_id="HJO87329.1"
                     /translation="MINLNIQPVVWALIDERPGTGNQTLAVAKLLDLPFEEKNLHWTH
                     FAELPNLLIGASLRGLTESSKSEIKTPWPDLVIAAGRRAGSVARYIKKQSLDDCSLVQ
                     IMNPGESTIRDFDLVAVPNHDGVLNSNPNIIRTTGAPHGIENGSLSEARVHWHTKFSD
                     FKKPL"
BASE COUNT          354 a          307 c          311 g          359 t
ORIGIN      
        1 cctgctacag ccagaacttt actgacccag taccgtggac caatgatctt ctctcgatcg
       61 gcaactattt taaccaatac caaagcctga tggcacattg ggaaaattat ctgccggtgc
      121 ctgcgtttac cctggattat gaaaatttag tggcggattt tgcgaatcaa gccaagcgga
      181 taattgagta tattggctta gactgggatg aaaactgttt gaaattctat gaaagtgaag
      241 gcgctgttca gaccgcgtcc agcacccaag tgcgggagcc catttatacc cactcaattg
      301 gccgctggca gctatacgcc gaacagctca agccactcat cgaagtttta gaattggatt
      361 agtagggcct agttgtcccg gcggcggatc gtgtgcccct cgtcggtcac gccactgaaa
      421 tgcattcaaa cgtcagagtg acgaacgggt tcaccggttt cttcgagttc gagattgcgc
      481 tggtcgacat aggttctgag atcactttcg tcgactaata catggtacta gggattgtct
      541 ttctgcggtt tagaaaaagc catctgggtg taccaatcgt cggtgccgtg aaacaccgca
      601 tcgacatcaa taataacacc ccgatagtcg aagcgtttgt gatgaaccaa ttgacctgct
      661 gtgaataaag ctttgcttgt cgatttttag tctataatcc caatatgatt ctcgaagcat
      721 tatggtataa cagtattatt aaagtgggta ttgtgttgct taatttccaa taattttatt
      781 atttcattac gtaacaaaat accgcaatgt gattatgccg aaaaaaaata aaatgaatga
      841 tcaaccttaa tatacagccc gttgtttggg ccctcatcga cgaacgtccg ggtaccggca
      901 atcagacact ggcggttgcc aaattactcg acctaccgtt tgaagagaaa aatcttcatt
      961 ggacccattt tgccgaattg cccaacctct taattggcgc ttctttgcgg ggtttgaccg
     1021 agtcttcgaa gtcggagatc aagacgccct ggcccgattt ggtgattgca gcgggacgcc
     1081 gggccgggtc cgttgcccgg tatatcaaaa agcaaagcct ggatgattgc agcttggtgc
     1141 aaataatgaa cccgggcgaa tctacgatcc gtgattttga tttagttgcg gtgcctaatc
     1201 atgatggtgt gctcaatagt aacccaaata ttatacggac caccggcgcg ccacacggta
     1261 ttgaaaatgg cagtctttca gaagcgcgcg tgcactggca cactaaattc tccgatttta
     1321 aaaaacctct g
//
LOCUS       DASCNL010000775         1544 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001596087, whole genome shotgun sequence.
ACCESSION   DASCNL010000775 DASCNL010000000
VERSION     DASCNL010000775.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001596087"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="QF359_10240"
     CDS             <1..248
                     /locus_tag="QF359_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJO87330.1"
                     /translation="DEESNAVVELTYNWDQAEPYELGDGFGHLAIAVPDAYAVCEAMK
                     KERVEVPRPAGPMKHGTRVIAFIKDPDGYMIELVQRD"
     gene            complement(250..>1544)
                     /gene="gltA"
                     /locus_tag="QF359_10245"
     CDS             complement(250..>1544)
                     /gene="gltA"
                     /locus_tag="QF359_10245"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HJO87331.1"
                     /translation="ANFFTLTYNGSGDSWKLPVLEGSVGPKVIDVRSLYADTNCFTYD
                     PGFTSTGSCESKITYIDGDEGILLYRGYPIDQLAEKSDYLETCYLLLYGELPNKEEKT
                     KFVYDITHHTMLHEQFNSFFHGFRRDAHPMAVMCGVVGALSAFYHDSLDINDPHHRMV
                     SSFRLIAKVPTIAAQAFKYSVGQPFISPRNDLGYAENFLHMMFATPAEECKVSPTLSK
                     AMDRILILHADHEQNASTSTVRLAGSSGANPFACIAAGIASLWGPAHGGANEAVLTML
                     NQISDVSNINEFIKKAKDKDDPFRLMGFGHRVYKNFDPRAKVMQQSCHEVLGELGITN
                     EPLLDLAMELERIALEDDYFVERKLYPNVDFYSGIIFKAIGIPVSMFTVLFAVARTVG
                     WISQWNEMIEDPTQKIGRPRQLYLGSGARDYVELSKRK"
BASE COUNT          421 a          340 c          397 g          386 t
ORIGIN      
        1 gtgatgaaga aagtaatgcc gtcgttgaac tgacctataa ttgggaccag gcagagccgt
       61 acgagcttgg tgatggcttt ggccatctcg cgattgctgt accggatgct tatgctgttt
      121 gtgaggcgat gaaaaaagag cgggttgaag tgccacgccc ggctggtccc atgaagcatg
      181 gtacgcgggt gattgctttt atcaaagacc cggacggcta catgattgag ttggtgcagc
      241 gcgactaaat tatttacgct tactcagttc cacataatct ctagcgcctg agccgagata
      301 tagttggcgt ggccgaccga ttttttgcgt cgggtcttcg atcatttcat tccactgaga
      361 aatccagcca actgtgcgtg caaccgcaaa caacaccgta aacatcgata ccgggatgcc
      421 gatggcttta aagataatac cggaatagaa atcaacatta ggataaagct tgcgttcaac
      481 gaaataatcg tcttcgagcg cgatgcgttc gagttccatt gccagatcaa gcagcggctc
      541 attggtaata ccgagctcac ccaaaacttc atgacaggat tgctgcataa ccttagcacg
      601 cggatcgaag tttttataaa cccggtggcc aaagcccatc aggcggaaag gatcatcttt
      661 gtctttggct tttttaataa attcgttgat attgctaacg tcactaattt ggttgagcat
      721 agttagcaca gcttcattgg cgccgccatg agctggtccc cagagcgacg caataccagc
      781 ggctatacag gcaaaaggat tggcgccact ggaaccggcc aggcgaaccg ttgaagtcga
      841 tgcattttgc tcatgatcgg catggagaat aagaattcgg tccatcgctt tggagagcgt
      901 tgggctaact ttgcactctt cggccggcgt ggcaaacatc atatggagaa agttttcggc
      961 atatcctaga tcattgcgcg gcgaaataaa tggctgacca actgaatatt taaaggcttg
     1021 agcggcaata gtcggaactt tggcgattag acgaaatgaa gacaccatgc ggtggtgcgg
     1081 atcgttaata tccaggctat cgtgataaaa ggcagagagg gcgccgacaa cgccgcacat
     1141 aacggccatt gggtgggcat cgcgccggaa accgtgaaaa aaggagttaa attgctcatg
     1201 cagcatcgta tgatgggtaa tatcataaac gaattttgtt ttttcttctt tgttaggcag
     1261 ttcaccataa agcagcaagt aacaggtttc gagatagtct gatttttccg ctaattgatc
     1321 gatcggatag cctcgataca gcaaaatgcc ttcgtcgcca tcaatatagg tgattttgga
     1381 ctcacagctg ccagtagacg taaagccagg atcgtaagtg aagcaattgg tatcagcata
     1441 aaggcttcga acatcgatga ccttggggcc aacggagcct tctaaaaccg gtaatttcca
     1501 agaatcgccc gagccattgt aggttaatgt gaaaaagttt gcgt
//
LOCUS       DASCNL010000776         1267 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001597059, whole genome shotgun sequence.
ACCESSION   DASCNL010000776 DASCNL010000000
VERSION     DASCNL010000776.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1267)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1267)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001597059"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1149)
                     /gene="lnt"
                     /locus_tag="QF359_10250"
     CDS             complement(<1..1149)
                     /gene="lnt"
                     /locus_tag="QF359_10250"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HJO87332.1"
                     /translation="MALGVIGVLALPPIHFVPALIPAFAGLIWLIDGSQKNANKGWRQ
                     FPRAHFLNSAFAAGWWFGVGFFVAGFYWISFSFLVDARQFAWMIPFAVLGLSAAFAVY
                     IGLVSSLTFRLSKPGSRRIIYFSLLWIIFEWLRSWAFTGFPWNLIGTVWTFSDAMIQV
                     TSLAGVMGLSLFTVLAASSFAILGCDSKSQRFRYQLTAAPLLILAVIWGGGVWRLLGA
                     ESRFVENVQLRLVQPNIAQEDKWNPGLRGKHLNNLLELSEAPALGENAGRKLTHIIWP
                     ETAMPFFLEGNDAVLRVIAQVIPESGALLTGSRRRTGGQGMPARLWNSLHVVGPDAKI
                     SATFSKFHQGPFGEYVPFRKYINFTKLTAGRIDFSSGPGLSSIAVPGLP"
BASE COUNT          360 a          332 c          292 g          283 t
ORIGIN      
        1 tggtagtccc ggcacagcga tcgaacttaa gccgggtccg cttgaaaaat caattcgtcc
       61 cgctgttagt ttggtgaagt taatatattt ccggaatggc acatattcgc caaagggtcc
      121 ctgatgaaat ttactaaagg ttgcagatat tttagcgtct ggcccgacga cgtgaagact
      181 attccagagc cgagctggca ttccttgtcc accagttcgc cgtcgtgagc cggttaacaa
      241 agcgccgctc tcaggaatca cctgagcaat tacccgtaag accgcatcat taccttctag
      301 aaagaaaggc atcgcagttt ccggccaaat aatatgcgtc aattttctgc cggcgttttc
      361 tccaagcgca ggcgcctcac ttaattccag taaattgttg aggtgtttgc cccggagccc
      421 aggattccat ttgtcttctt gtgctatatt cggctggacc agacggagtt gaacattttc
      481 aacaaaccgg ctttcggcgc cgagcaagcg ccaaacccca ccgccccaaa tgaccgccag
      541 gatcaatagt ggtgctgccg ttaattgata tctgaaccgt tgcgatttgc tatcgcaacc
      601 aaggattgcg aacgaacttg ccgccagtac ggtaaatagg ctcaacccca tcacgccggc
      661 caaagacgta acttgaatca tggcgtcact gaacgtccag acagttccga tcaaattcca
      721 aggaaaacca gtgaatgccc agctacgcag ccattcgaag attatccata gcagcgagaa
      781 ataaataatg cgccggctgc ccggttttga cagccggaat gtcaggctgc ttaccagacc
      841 gatataaacg gcaaaggctg ccgacaatcc taaaactgca aaaggaatca tccaggcaaa
      901 ttgtcgggcg tcgaccagaa atgaaaacga tatccagtaa aatccggcaa caaaaaaacc
      961 gacaccgaac caccaaccgg cggcaaaggc actatttaag aaatgcgcac gtggaaactg
     1021 acgccagccc ttattagcat ttttctgtga gccatcaata agccaaatca aaccggcaaa
     1081 ggctggtatc agcgctggca caaaatggat aggcggtaag gccagtacac caatgacgcc
     1141 gagagccaaa gctaaaaatg cacgccgcca gttttggcaa tttttagctt gagcatgcca
     1201 attttcgatt ttggtgagca tcttttacga agcggatatt ctaatttcag ggtccgtttc
     1261 caagccg
//
LOCUS       DASCNL010000777         1297 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001599030, whole genome shotgun sequence.
ACCESSION   DASCNL010000777 DASCNL010000000
VERSION     DASCNL010000777.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001599030"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="QF359_10255"
     CDS             <1..459
                     /locus_tag="QF359_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87333.1"
                     /translation="NPCPHSSCVKLYRQSGQTPCMRFCPVECLSGSIGDDDKVAEMNY
                     NAHACAEMSQQYEAIPGVLLDTLDAKDPIERGMALHGPENQVIWYKLAIGAGELLALC
                     YECMRVCPIIQTAPLGNPIARGAGMRQKIAEAEAAAKAEHAVEQAAEKGD"
     gene            462..>1297
                     /locus_tag="QF359_10260"
     CDS             462..>1297
                     /locus_tag="QF359_10260"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO87334.1"
                     /translation="MAYGVTQQMIDTFGEIVFKLSLNKQTRRGDAVRELDFDILEANR
                     DETGLTDEEIAERIGLLPEQVGVVRVFTERKYHKIDQHRRIYHLGGGKRWKKETYRSP
                     AERLRFNEEAMMLREAINFKPELVARYIDDGYWINETLNGWLTDHAQNTPDAIAIVHP
                     GGEVTYQELKNRVDQLTNGLLSLGLLKSDVVAVQLPNTLDFVVSYLAITAFGGVMQTI
                     HMPYRDADIEFLLGHAQARAVICLPTFKEFQTAEVILSMKDNLNSLKHIITVGDSASE
                     DC"
BASE COUNT          344 a          334 c          332 g          287 t
ORIGIN      
        1 aacccgtgcc cgcattcatc ctgcgtcaaa ctttaccgcc aatccggtca aacaccgtgc
       61 atgcggtttt gcccggtgga atgcttgagc ggctcaatcg gcgatgatga caaagtcgca
      121 gagatgaatt acaacgccca tgcctgcgct gaaatgtcac agcaatacga ggcaatcccg
      181 ggcgttcttc ttgatactct tgatgccaag gacccgatcg aacgcggcat ggctctgcat
      241 ggccctgaaa accaggtaat ttggtacaaa ttggccattg gcgccggtga gctcttggcc
      301 ctgtgttacg agtgtatgcg agtctgccca atcatccaga ccgcaccgct tggcaatcca
      361 atcgcccgcg gtgcaggtat gcgccaaaaa attgccgagg ctgaagctgc cgccaaagca
      421 gaacatgctg ttgagcaagc agcggaaaag ggagactagg catggcttat ggtgtgactc
      481 agcagatgat cgatactttt ggtgagattg tctttaaact tagcctcaat aaacaaaccc
      541 ggcgcggcga tgcggtccgg gagttggact tcgatatctt agaagccaac cgggatgaaa
      601 ctggattaac cgacgaagaa attgccgagc gtattggact actgcccgaa caagttggtg
      661 tggtgcgggt ctttactgaa cgcaaatatc ataaaataga tcagcaccgc cgcatctatc
      721 atttaggcgg cggcaaacgc tggaagaaag aaacctaccg aagcccagca gaacggctgc
      781 gctttaacga ggaagctatg atgctaagag aagccattaa ctttaagccg gaactagtgg
      841 cgcgttatat cgacgacggc tactggatta atgagaccct gaacggctgg ctcaccgatc
      901 acgcccaaaa cacgcccgat gctatcgcca ttgttcatcc aggtggcgaa gttacctatc
      961 aggagcttaa aaaccgcgtc gatcaattga ccaatggcct gctatcgctc ggcctgttga
     1021 aaagcgatgt ggtggcggtg cagctgccaa atactttaga ttttgttgtt agctatttag
     1081 ccatcacagc ttttggcggc gtcatgcaaa ccattcatat gccttaccgg gacgccgata
     1141 ttgaatttct actcggccac gcccaagcac gggcagtgat atgcctgccg acttttaaag
     1201 aattccagac cgccgaagtg atactcagca tgaaagataa tctcaactcg cttaagcata
     1261 tcattacagt cggagacagc gcatctgaag actgcca
//
LOCUS       DASCNL010000778         2371 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001602331, whole genome shotgun sequence.
ACCESSION   DASCNL010000778 DASCNL010000000
VERSION     DASCNL010000778.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001602331"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1832
                     /gene="ggt"
                     /locus_tag="QF359_10265"
     CDS             <1..1832
                     /gene="ggt"
                     /locus_tag="QF359_10265"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HJO87335.1"
                     /translation="SRTPIRSKLTILASLMILSACGGELQISNQVNEKASNQTIQVET
                     NKDARATPETASNRFTGPVNRSSTVAQKYMVAAANPLAAQAGLEILRAGGSAVDAVIA
                     TQLALNVVEPQSSGIGGGAFLMHYQAKSRAIEAYDGRETAPAAATGDMFLKKDGSQPN
                     FHDVVPGGLSVGVPGALRMMELAHKKNGKLAWARLFEPAIKLADEGFKISKRLHTLVK
                     IDRHLKKFSLSKTFFFDSVGFAKPVGSLLINKPLADTFRQIARDGADAFYKGEIAEDI
                     VKTVQGASLNPGRMTNADLTGYQAKMRSPVCSFYRMWMICGMPPPTSGGITTLQILGL
                     LQSTDMSRLIPGSAEAIHIIAEAGRLAFADRNKYLADDDFITVPKNRLIDPGYLAKRA
                     KLISKTQSMGKAKPGKVKLKTAHLFGTYTAHEGESTSHISVVDGNGNAVAMTSSIENT
                     FGSRLMVRGFLLNNQLTDFSFVPVVNSKVIANRVQPKKRPRSSMSPTLVVDGSGKLVM
                     AIGSPGGSRIIGYVAKTLIAALDWKMGIQAAIDLPHFINRNGSTDIEKGSNLEALKPA
                     LEKLGHKVRIRKLTSGLHGILKTKDGKLYGGADPRREGVTLGD"
     gene            complement(1846..2046)
                     /locus_tag="QF359_10270"
     CDS             complement(1846..2046)
                     /locus_tag="QF359_10270"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJO87336.1"
                     /translation="MPDKAKDNLFTLFISSTKKDSTGLGLVIAREVMRTHGGDFNVLK
                     TGDEGTIFSIELPENIKEGAAL"
     gene            complement(2036..2191)
                     /locus_tag="QF359_10275"
     CDS             complement(2036..2191)
                     /locus_tag="QF359_10275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87337.1"
                     /translation="MTENTTAETTGSKLANETQSTKQIRAVLSLCRPSHKTPSASKSR
                     MMARLAG"
BASE COUNT          609 a          593 c          586 g          583 t
ORIGIN      
        1 acagccgcac acctatccgc tcaaagctga ccattttagc cagcctcatg attttatcag
       61 cttgtggagg cgaattgcag atcagtaatc aagtaaatga aaaagccagt aatcaaacga
      121 tccaagtgga aaccaataag gatgctagag cgacaccgga aacggcgtct aatagattta
      181 ctggccccgt caaccgctcc tcgaccgtgg cgcaaaaata tatggtggcg gcggcaaatc
      241 cgctggcggc ccaggcagga cttgagatat tacgtgccgg tggttctgcg gttgatgccg
      301 taattgcgac ccaactcgcc ttgaacgtgg tcgaaccgca atcctccgga atcggtggcg
      361 gcgctttttt aatgcattac caagcaaaat cccgtgccat tgaagcttat gatggaaggg
      421 aaaccgcacc ggctgcggcg actggcgata tgttccttaa gaaagatggc tcacagccta
      481 atttccatga tgtggtgccc ggtggccttt cggtaggtgt gccgggggca ctgcgaatga
      541 tggaactcgc ccataaaaaa aacggtaagc tcgcctgggc cagattgttt gaaccggcaa
      601 tcaagcttgc cgatgaaggc tttaaaattt cgaaaagact ccataccttg gttaaaatag
      661 accgccatct aaaaaaattc agtctgtcaa aaaccttctt ttttgatagc gtcggcttcg
      721 ccaaacctgt cggcagtctg ctaatcaata aacccctggc tgataccttc cgccaaatcg
      781 ccagggatgg ggccgatgca ttttataaag gcgagatcgc cgaagatatt gtcaagactg
      841 tacagggtgc gtcccttaac cccgggcgga tgaccaatgc ggacctcacc ggttatcagg
      901 ccaaaatgcg ctccccggtg tgttcgttct atcgcatgtg gatgatctgt ggcatgccgc
      961 ctccgacgtc cggcggtatt accactctgc aaatcttggg gcttttacag agcactgata
     1021 tgtctcgcct tattccaggt tccgccgaag ccattcacat aatcgccgaa gcaggacggc
     1081 tggcctttgc agatcgcaat aagtatctcg ctgatgatga ttttatcacc gtaccgaaaa
     1141 accggctcat cgatcccggc tatcttgcca aacgcgcaaa gcttatctcg aaaacccaat
     1201 cgatgggtaa agccaaacca ggtaaagtga agctcaagac cgctcatctg tttggcacct
     1261 atacggcgca cgaaggggag tcgacatccc atattagtgt tgtcgatggc aacggtaatg
     1321 cggttgccat gacatcgagc attgaaaata cttttggctc acggctgatg gtgcggggtt
     1381 ttttgctcaa taatcaactc actgactttt cttttgtacc ggtggtaaac agcaaagtaa
     1441 ttgccaatag agtacaacct aaaaaacgtc cgcgctcatc gatgagccca acgctggtag
     1501 ttgacggcag cggcaagttg gttatggcaa ttggctcgcc gggcggctca cgcattatcg
     1561 gctatgtcgc caaaactttg attgcggcat tggattggaa aatgggcatt caggcagcga
     1621 ttgatttgcc acatttcatc aaccgcaacg gctcgaccga tattgaaaaa ggcagcaacc
     1681 tggaagcgct caaaccggcg ctcgaaaagc ttggccacaa agtccgcatc cgcaaattga
     1741 ccagcggcct ccacggtatt ttaaaaacca aggacggcaa actatacggt ggcgctgatc
     1801 cccggcgcga aggcgtcacc ttaggggatt aagacggcgc tgatactaca acgcagcacc
     1861 ttctttgata ttctccggca attcgatact aaagattgtg ccctcatcac cggtttttaa
     1921 cacgttgaaa tcaccgccat gggtgcgcat tacttcgcgc gcaataacca agccaagtcc
     1981 tgtgctatct tttttagttg agctaataaa caacgtaaaa agattgtctt ttgctttatc
     2041 cggcaagccg ggccatcatc ctggactttg atgcagacgg cgttttgtgg cttgggcgac
     2101 acagcgacaa aacggctcgg atttgtttgg tggattgagt ctcattggca agcttgctgc
     2161 cggtggtttc agcggtggtg ttttcggtca tataatcctg gaaatctgtt caaataatga
     2221 aatacacacg gggtctcttt tacctttata atacatgtag gtaaattcga ggaatttgtt
     2281 acgcaatcga gcctcttccc tccagtcacc attgcgtgaa gccgatttga aagcttcaat
     2341 tctttgtgcg aagtatcgtt gacttatagg g
//
LOCUS       DASCNL010000779         1271 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001607390, whole genome shotgun sequence.
ACCESSION   DASCNL010000779 DASCNL010000000
VERSION     DASCNL010000779.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1271)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1271)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001607390"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1161
                     /locus_tag="QF359_10280"
     CDS             <1..1161
                     /locus_tag="QF359_10280"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87338.1"
                     /translation="FWMFRVTLGWYTWEITNSPAWLGIIGFASLIPTLVFGPIAGALS
                     DRIGHKRVAMSSMVLSSIITFIMAYLIAAELMTIHVLFVSTTLLGSIMSFDFPARHAM
                     VPDLVDRKELSAAVALNISTFHVGSFIGPIIGGYMVVEAGIAASFFVYVFTTIYFFVA
                     LLFVYITPTVKSAANETVQRSTLLNDIMTGLLYLVRHPALKWVAILNICGALLLRPYM
                     ELLPGYADVIFDRSVDGLSLLIAASGLGAFSGSFLLALRGKTQGLTNILLIGLGVSSI
                     SLILFATTSHFLIGQICLFFGALTLVGAAVCGQSLIQHKVEPHLRGRVISLIMSLVVG
                     GMAVGSLSLGMLGEIIGLRWPIIGGAIVALGILVFAVKPMRAQAAQLEAAIT"
BASE COUNT          248 a          291 c          325 g          407 t
ORIGIN      
        1 ttctggatgt tccgagtgac gctcggttgg tacacctggg agattaccaa ctcaccggcc
       61 tggttaggga ttattgggtt tgcctcgctt ataccgacat tggtttttgg tccgatcgct
      121 ggggcgctgt ctgatcgaat tggccataag cgggtcgcca tgtcttctat ggtgttgtcc
      181 agtattatta cttttataat ggcctatcta attgccgccg aattgatgac gatccatgtt
      241 ctgtttgtct ccacgacctt gctgggcagc attatgtcct ttgattttcc tgcccgtcac
      301 gcaatggtgc ctgatttggt ggataggaaa gaactctcag ctgccgttgc gctcaatata
      361 tcgacctttc atgtcggtag ttttatcggt ccgattattg gggggtacat ggtggttgag
      421 gccggcattg ctgcaagttt tttcgtctac gtgtttacaa cgatatattt tttcgtcgca
      481 ctgctgtttg tttatataac accaacggtc aaatccgctg caaatgagac cgttcagcgc
      541 tccactttgc tcaatgatat tatgacggga ttgctatatc tcgtccgtca cccggctttg
      601 aaatgggtag ctattctgaa tatctgcggc gctttattgt tgcggcccta tatggagttg
      661 ctgccgggct atgcagatgt catttttgat cgctcggtgg atggcttgtc attgctgatc
      721 gctgcctccg ggcttggcgc attctcgggg tcttttttac tggcactgcg cggtaaaaca
      781 caaggcctga caaatatcct tctcattggg ctgggcgttt cttccatttc actcatatta
      841 tttgccacca cgagccattt cttaatcggt caaatctgcc tgttctttgg cgccttgacg
      901 ttagttggtg ccgcggtgtg cggtcaaagt cttatccagc ataaggtaga gccacatctc
      961 cgtgggcggg tgattagcct aattatgtca ctggtcgtcg gtggcatggc ggttgggtct
     1021 ctgagtctcg gcatgttggg agagattatc ggcctacggt ggccaatcat cggtggcgct
     1081 atcgtggcgc ttggtattct cgtttttgcc gtcaagccaa tgcgcgcgca ggctgcgcaa
     1141 ttggaagcag caataacttg aatttcgccg gatatcgttc cgaaatacgc attccgtatt
     1201 atgaaatttg tatattttgc tcaaacaatt cgcgtgcata aagtcttcaa ataaaaaatg
     1261 aacctgatat a
//
LOCUS       DASCNL010000780         1035 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001608469, whole genome shotgun sequence.
ACCESSION   DASCNL010000780 DASCNL010000000
VERSION     DASCNL010000780.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001608469"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1035
                     /gene="mnmE"
                     /locus_tag="QF359_10285"
     CDS             <1..>1035
                     /gene="mnmE"
                     /locus_tag="QF359_10285"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HJO87339.1"
                     /translation="GEDVIELHVHGGRAVIAGITDALEKLDDVRLAEAGEFTRRAFEN
                     GKLDLTAAEGLADLINAETAAQRRQAQRQLQGDLGLIYDDWRERLLKAIALFEAEIDF
                     SDEDLPPGLQEQVAQQIADLTGEISAHLDDSGQGEILRHGLYITIIGPPNAGKSSLLN
                     RLSKRDVAIVSETAGTTLDVIEVHLELEGYPVILADTAGLRDVADGIESESVRRARER
                     AKTADLKLAVFDGTLWPDQDPHTGELIDDDTLVVINKSDLLEGSDFDYLAISAETGDG
                     FDILLEKLKKEVEQRCHLSASPALTRTRHRVALEKCLQNLRRFPEVTETELKAEDLRH
                     AARALGRITG"
BASE COUNT          248 a          239 c          287 g          261 t
ORIGIN      
        1 ccggcgaaga tgttattgag ctgcatgttc atggtggccg cgcggtgatt gctgggataa
       61 ccgatgcgtt ggagaaactt gacgatgtga ggttggcgga agctggcgaa tttaccaggc
      121 gcgcttttga aaatggtaag ctggacctaa ccgccgccga agggttagcg gatctcatta
      181 atgcggaaac tgctgctcaa cgccgccaag cccagcgtca gctacagggc gatctaggcc
      241 taatctatga tgactggcgt gaacgtttgc ttaaagcaat cgccctgttt gaagccgaga
      301 tcgatttttc tgatgaagat ttgccaccgg gattacagga acaagttgct caacagattg
      361 ccgatcttac tggcgagatt tcagcgcatt tggatgattc tggacagggc gagattttac
      421 gtcacggtct ctatatcacg attattggtc cgcccaatgc cggcaagtcg agcctgctaa
      481 atcgcttgtc caaacgcgat gtcgcgatcg tttcagaaac tgccggcacg accctggatg
      541 tcatcgaggt gcacttggaa ctggaagggt atccggtgat cctggctgat accgccggtt
      601 taagggatgt ggccgatggt attgaaagcg agagtgttcg ccgtgcccga gaacgcgcca
      661 aaacagctga tcttaaatta gcggtgttcg atggcacctt gtggccggat caggaccctc
      721 atacaggtga gcttattgat gatgatacgt tggtcgtcat caataagtct gatttacttg
      781 aaggcagtga ctttgattat ctcgctattt cggcagaaac aggtgatggt tttgatattt
      841 tactggagaa attgaaaaaa gaagttgaac aacgctgcca tttatcagct tctcctgccc
      901 ttacgcgcac ccgccatcgc gttgcacttg aaaaatgtct ccaaaatctc aggcgttttc
      961 cggaagtaac cgaaactgag ttaaaagcgg aggatttacg gcacgccgcc cgggctttgg
     1021 gtcgcattac cggcc
//
LOCUS       DASCNL010000781         2214 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001611377, whole genome shotgun sequence.
ACCESSION   DASCNL010000781 DASCNL010000000
VERSION     DASCNL010000781.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001611377"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(446..670)
                     /locus_tag="QF359_10290"
     CDS             complement(446..670)
                     /locus_tag="QF359_10290"
                     /inference="COORDINATES: protein motif:HMM:NF013375.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HJO87340.1"
                     /translation="MLNQCILIMGISGSGKTTTGKLLANKIGGDFLDADDLHPRCNIQ
                     KIKNGYSLTDQDRAPWLEEIISAITNYHRQ"
     gene            complement(765..1211)
                     /locus_tag="QF359_10295"
     CDS             complement(765..1211)
                     /locus_tag="QF359_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HJO87341.1"
                     /translation="MKLQKATQYGLYAVLELARDPSHQLSATHIADIYGISSNHLAKV
                     LRDLGRAGLVNSVRGAGGGYRFSGNSKRTTLMDVINIFEEIGSDSTAAADPGDATDIG
                     CALLLVLGEIDDIARATFGSITLDTLLKTMHWQREREEKLQNPAVV"
     gene            complement(1236..1697)
                     /locus_tag="QF359_10300"
     CDS             complement(1236..1697)
                     /locus_tag="QF359_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJO87342.1"
                     /translation="MNTETQFLQVNIRPASIDDLQKVVDLDAEITGLEKKEYWENHFN
                     RFAERNGRYLMIAESKTPCEFLGFIVGEVSGWEFGSRPCGWVFVIGVAPSHRVQGIGE
                     KLFNAMCEVLKADGADSVRTMVGRDDQLNMSFFRSQGMMAGPFIELEKPLF"
     gene            1943..>2214
                     /locus_tag="QF359_10305"
     CDS             1943..>2214
                     /locus_tag="QF359_10305"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382621.1"
                     /note="cleaves the ring of
                     2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming
                     6-hydroxy-3-hexenoyl-CoA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA-dihydrodiol lyase"
                     /protein_id="HJO87343.1"
                     /translation="MIDFSTNPSQYKHWQLSFDGPVATLAMDVAENGGMAPGYELKLN
                     SYDLGVDIELYDATQRLRFEHPEIKSVIITSAKDRIFCAGANIAMLG"
BASE COUNT          635 a          507 c          448 g          624 t
ORIGIN      
        1 taaattcgat gtcgaaagat attcccatcg ctcagacctt caaaggggtt gcccctttca
       61 ttgcctccga cgtggttcga gtcgcattgc tggtcgcgtt cccgggtttg acgctcttcc
      121 tggtgcagtt gttcggaaat taatcaaccg gcagagtgaa acagtatcag ttcctttgca
      181 cgtcaaatat ccctagttcg cgtattatga tccgcacgat ctcatctggc gtatcagaaa
      241 tagaaatatt taaagcggtc gagggtttct caagatcgtt aaattgtgat tttaaaagag
      301 tttgaggcat aaagtggttt tctcgacttg ccaacctttc tgaaatttga gtttttgaac
      361 catctaagaa gacgagagtg tagttttgcc gacccatttt ttcccgatag gattttttta
      421 aagcagaaca ggcgataacc agaatttatt gacgatgata attcgtaatt gcagagataa
      481 tttcttccaa ccatggggct ctatcttgat cagttaaaga gtagccattt tttatttttt
      541 gaatattaca acgtggatgc aaatcatcgg catctaaaaa atcaccacca attttgttag
      601 ccaataattt accagtagtt gtcttcccac taccggaaat gcccattatc aatatacatt
      661 gatttagcat caacttacta tttcccgtaa attctctgat ttaataaaac ttgaaaaaat
      721 ggaatagaag cagccaaaac caattctgct taaattaaac agttttaaac aacagctgga
      781 ttctgtaact tctcttcccg ctctcgctgc cagtgcatgg tttttaatag tgtgtccaag
      841 gtgattgagc caaaggtcgc ccgagcgata tcatcgattt cacccaacac taacagcagc
      901 gcgcaaccga tatcggttgc atctccggga tcagcagctg cggtcgaatc actgccaatt
      961 tcctcaaaga tattgataac atccatcagg gttgttcgtt tagaattacc ggagaaacgg
     1021 taaccaccac cggcaccccg caccgaatta accaagccgg cgcggccaag atcacgcaat
     1081 actttggcaa ggtgattgga tgatatgcca tagatatcgg cgatatgcgt tgccgacaat
     1141 tggtgggacg gatctcgggc aagttccaaa accgcatata atccgtattg ggtggctttt
     1201 tgcagtttca cctatgctct ccaatcatga ttctactaaa aaagaggttt ttccaattca
     1261 ataaagggtc cggccatcat gccctgcgaa cgaaagaagg acatgttgag ctgatcatcc
     1321 cgtccaacca tagtccgtac cgaatcggcg ccatcagcct tcaaaacctc acacatggca
     1381 ttgaacaatt tctcgccgat gccttggaca cgatgggagg gcgcaacacc aatgacaaat
     1441 acccagccgc agggcctcga gccaaattcc catccactta cctcaccaac aataaatccc
     1501 agaaactcgc agggagtttt cgactcggcg atcataagat accgcccatt gcgttcggcg
     1561 aaacgattaa agtgattttc ccaatattcc tttttctcca aacccgtgat ttcggcgtcc
     1621 aaatcgacga ctttttgcaa gtcatcaatg ctggctggac gaatatttac ctgcaaaaat
     1681 tgtgtttctg tgttcatagt tctctttgat tcaatcactt aggtataaaa ttgatttaga
     1741 tcaattttgt ctattgacac aatgcaacga ggcgctctat atgtaaatag gtattttggt
     1801 accgatttac gaaaagattt ccaaaagctt gtgttacacg gaataaatag ctgaaatcaa
     1861 ggtattatac atcattcttt tgaataattg taattaatag tcagatatta tttggcatca
     1921 aaatagagga taagacggta ggatgattga tttttcaacg aaccccagcc agtataaaca
     1981 ctggcaactc tccttcgatg gaccggttgc gactttggca atggacgttg ccgaaaatgg
     2041 cggcatggcc ccaggatacg agctcaaact gaactcatat gatttgggcg tcgatattga
     2101 actttacgat gcgacccagc gtttacgctt tgagcatccg gaaattaaaa gcgtcatcat
     2161 cacctcagca aaagaccgca tattttgcgc cggcgctaat atcgccatgc tcgg
//
LOCUS       DASCNL010000782         3382 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001613142, whole genome shotgun sequence.
ACCESSION   DASCNL010000782 DASCNL010000000
VERSION     DASCNL010000782.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001613142"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="QF359_10310"
     CDS             complement(<1..547)
                     /locus_tag="QF359_10310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HJO87344.1"
                     /translation="MARKTSLERYRNIGIMAHIDAGKTTTTERILYYTGKSYKIGEVH
                     DGNATMDWMEQEQERGITITSAATTCEWNDHLINIIDTPGHVDFTIEVERSLRVLDGA
                     VAVFDSVAGVEPQSETVWRQADKYEVPRICFVNKMDRTGADFYRCIDMIIDRLGATPL
                     VTQLPVGAEADFAGVIDLIKMR"
     gene            complement(577..1047)
                     /gene="rpsG"
                     /locus_tag="QF359_10315"
     CDS             complement(577..1047)
                     /gene="rpsG"
                     /locus_tag="QF359_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007399617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HJO87345.1"
                     /translation="MSRRHAVEKRQVLPDPKFGDLVITRLMNRLMLDGKKSVAERIVY
                     GAFDDIEKKAGSDPVALFHEALANVKPQVEVRSRRVGGATYQVPVEVRNDRAQALALR
                     WIIDLSRSRSENTMVERLSGELLDAANNRGAAVKKREDTHKMAEANKAFSHYRW"
     gene            complement(1063..1434)
                     /gene="rpsL"
                     /locus_tag="QF359_10320"
     CDS             complement(1063..1434)
                     /gene="rpsL"
                     /locus_tag="QF359_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011251969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HJO87346.1"
                     /translation="MPTVNQLIRKPRKAPIKRNKVPAMEQCPQKRGVCTRVYTTTPKK
                     PNSALRKVARVRLTNGFEVTSYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHVIRGTL
                     DTQGVEDRRQRRSKYGAKRPK"
     gene            2162..3034
                     /locus_tag="QF359_10325"
     CDS             2162..3034
                     /locus_tag="QF359_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HJO87347.1"
                     /translation="MSLDYQTIMNYQFPDIRRTYTKDDTILYALGLGLGSDPMDEDQL
                     LFVYEKNLQALPTMPVILGFDTVPLNEVPELSSINFTMLVHGEEYLTAHNPLPAEGST
                     LCRTKILNILDKGADKGAIIYRQKEIVNEADDTLLATLIDNIFLRGNGGFGGEPGPVP
                     APPVHKLPKTEPDETWELPTLPQTAMIYRLSGDYNPLHIDPEFATAAKFDRPILHGLC
                     TFGMAGQAVIKQFCGYDPTKLKALQVRFSAPFFPGETIRFEMWRGGSEISLRAKSVER
                     DVMVLNNGRAEISG"
     gene            complement(3169..>3382)
                     /locus_tag="QF359_10330"
     CDS             complement(3169..>3382)
                     /locus_tag="QF359_10330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87348.1"
                     /translation="HLANDKHPFEIEERKLAEGRRRVIIGNSNYIGAETHSQFFYHTG
                     YFGGVINLGAIVIDGYFALFSKQVFT"
BASE COUNT          889 a          828 c          799 g          866 t
ORIGIN      
        1 cccgcatttt aattagatcg ataacgccgg caaaatcggc ttcggcaccg accggcagtt
       61 gagtaaccag aggcgttgcg cccaaacggt caataatcat gtcaatgcag cgatagaaat
      121 cggcgccggt ccggtccatt ttgttaacaa aacagatacg cggcacttca tatttgtcag
      181 cttgacgcca caccgtttcc gattgcggtt caacaccggc gacactatca aacaccgcta
      241 ccgcgccatc aagcacccgc aaggaccgtt caacttcaat agtgaagtca acgtggcctg
      301 gagtatcaat gatattaatg agatggtcgt tccattcgca ggtcgttgcg gcagaggtaa
      361 tcgtgatgcc gcgttcctgt tcctgctcca tccagtccat ggtggcgtta ccgtcatgaa
      421 cttcgccaat tttgtaagat ttaccggtgt aatagagaat gcgttccgtg gtggttgtct
      481 tgccagcgtc aatatgggcc ataatgccaa tattgcggta acgttcgagt gaagttttac
      541 gtgccattgt tcttcttctt tcttccgtaa atccggctac cagcgataat gcgagaaggc
      601 tttgttagct tctgccatct tgtgggtatc ttcgcgtttc tttacagcag cgccacggtt
      661 attggcagca tccaaaagtt cgcccgacag acgttcgacc atggtgtttt ccgaacggct
      721 acgggaaaga tcaataatcc agcgcagcgc caaggcctgg gcgcggtcat tgcgcacttc
      781 aaccggcacc tgataagtcg cgccaccaac ccggcgggag cgcacctcaa cttgcggttt
      841 cacatttgcc aaagcttcgt ggaacaaagc caccggatca gaaccagctt tcttctcaat
      901 gtcatcaaat gcgccataaa caatccgctc agcgacggat tttttgccgt caagcatgag
      961 acggttcata agacgcgtga taactagatc accgaatttc ggatcgggaa gaacctggcg
     1021 tttttctacg gcgtgacgtc gtgacatcct gctaaatcct tactatttcg gccgtttggc
     1081 gccgtatttt gaacggcgtt gacgacggtc ttcgacgcct tgagtatcca aggtgccacg
     1141 aatgacgtga taacgaacac ccggcaaatc cttcacccgt ccaccgcgga ttaacaccac
     1201 gctgtgctct tgcaggttat ggccttcacc aggaatataa gaagtaacct caaaaccgtt
     1261 ggtcaaacga acccgggcaa ctttacgtag cgctgagttc ggtttcttcg gcgttgtcgt
     1321 ataaacacgg gtacaaacac cacgcttttg cgggcattgt tccatcgccg gaactttatt
     1381 acgttttatc ggcgctttac gcggcttacg aatcaattgg ttgactgtcg gcataagcct
     1441 cttcaactcc ttaaaactag caacagcaca tcactaacat gacgtgcaac aaacccgctc
     1501 aagagcgctt gcctgtttgc tctcagcgga cgatttttaa ggcccataaa aatcccaaac
     1561 aacatggggg tatcgggcta tatgtgtctc aaattcttag ggataatctg cgtctaggcg
     1621 gaacacctac caccagcgac ccctgggaag acgcggaata taaggaggtt tggctatggc
     1681 gtcaagcgaa gaaatgctgt tttatcacgc attttacatg gcagggataa attattactg
     1741 aaatcgagat tttgtccaga ttttcggtgt tttgccggtg atcaagtggt aaaatagatg
     1801 aggatagggc gtcattatta actcttacta cgtaaccaag attgacaaaa taagaattat
     1861 caagaatctt aatatttaag tttttgataa tttacttagt agccgttcga atcctatcgt
     1921 cggaacatta atgtcattgt tctcaattga gtgccgtttt ttggagaata gccaattaaa
     1981 aaattaccta ataaataatt tattgtaata taagcaagga aaatattatc atctacgatg
     2041 tttgtgattc atccaaatgt atcaagcggg cttggcgggg cgattgatcg aatgagccga
     2101 cgattgcatc tgatttgaaa gatatccggg aaatgttgga taattttatt aggaaagaac
     2161 gatgtcactc gattaccaaa ccattatgaa ctatcaattt ccggatattc gccggaccta
     2221 taccaaagac gatactatat tgtacgctct tgggctcggg ctgggcagcg atcccatgga
     2281 tgaggatcaa cttttattcg tttatgaaaa aaaccttcaa gccctaccaa ccatgccggt
     2341 gatccttggt ttcgatacag tcccccttaa cgaggttccc gaactcagca gcatcaattt
     2401 cactatgttg gtgcatggtg aagaatacct aactgcccac aatcctttac cagctgaagg
     2461 ctccacactg tgccgcacca aaatcctcaa tatcctggac aagggtgccg acaagggtgc
     2521 catcatatat cgtcaaaagg aaatcgtgaa tgaggccgac gacaccttgt tggcaacctt
     2581 gatcgacaat atattcctgc gtggcaatgg cgggtttggc ggcgagccgg gaccagtgcc
     2641 ggcaccgccg gtacataagc tgcccaaaac cgagccggac gaaacttggg aattacccac
     2701 cttgccccaa acggcgatga tttaccggct gagtggggat tacaatccgc tgcatatcga
     2761 tccggaattc gccaccgcgg ccaagtttga ccgccccatt ttgcatggat tgtgtacctt
     2821 cggcatggca ggccaggcgg taataaagca attctgcggc tatgatccga ccaaactcaa
     2881 ggccttgcaa gtgcgatttt cggcaccctt ttttccgggc gaaacgattc gcttcgaaat
     2941 gtggcggggt ggttcagaaa tttcattacg ggccaaatcc gtagagcgcg atgtgatggt
     3001 gctcaataac ggccgggccg agattagcgg gtaattaccg attaacctgt atgatcaaat
     3061 aaaggcacaa aataatagct cttatggatt taaccaatgt cgaacgtgtt gtcgggcgag
     3121 tccgcgagga tgaggtagag gctgctaacc ttctggcgct acctgtattt aagtaaagac
     3181 ctgcttagaa aacagcgcga agtacccgtc aattacaatc gcaccgagat tgataactcc
     3241 accaaaataa ccagtgtggt aaaaaaactg gctatgagtc tcggcgccga tgtagttgga
     3301 attgccgatt atcacccggc ggcgaccttc agccaatttc cgctcctcga tttcaaacgg
     3361 atgtttgtcg ttggcaaggt gt
//
LOCUS       DASCNL010000783         3547 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001615089, whole genome shotgun sequence.
ACCESSION   DASCNL010000783 DASCNL010000000
VERSION     DASCNL010000783.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3547)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3547)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3547
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001615089"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(95..895)
                     /locus_tag="QF359_10335"
     CDS             complement(95..895)
                     /locus_tag="QF359_10335"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HJO87349.1"
                     /translation="MPGSMLVDSHCHLNYDGLREDIEGAISRASESGVGFMLSISTRL
                     RDFAGVLATAAAHDNVACTVGIHPHESGNESETDVETLVKLTKHPKVIGIGETGLDFY
                     YDNSPREAQERSFRTHIAAARETQLPVVVHTRDADERTISIIDEEQQKGAFPGLIHCF
                     SAGPELAKCAVNYGMAISLSGMITFNSAEPIRESVKSVPLEHILVETDAPFLAPIPHR
                     GKPNEPAYVTHTAKKAAEIFDISPQELAEQTTANFFRLFSKAKRPVSA"
     gene            1022..3238
                     /locus_tag="QF359_10340"
     CDS             1022..3238
                     /locus_tag="QF359_10340"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87350.1"
                     /translation="MSMIQTTCRLCLVRCGMLVETEDVPNTTGSAANSPLGKIKKFIG
                     DRKHPLSQGYLCVKGKASLDMMEAEDRVIYPQKRVGERGSGQWERVSWDDALQDIAER
                     MNAIIDEHGARAIAVQALPPKEYYAYDLFLEAIGSPTFFKHDAHNCFTPQLMSDVLTF
                     GMLTTYINFKNVEDCETIVLWGVNLTETNGSKAVRVKDAKRKHGAKTIVVDPRPTRSA
                     READLWLRIRPGTDDALAMGMINLMIENGWYDEQFVKDWTIGFDELKARAADYTLEQT
                     SKTTWIQEADILEATRLFATSNSSALYTFIGATMGGNSISTLRLMGFLPALTGRLDQA
                     GNNCIHKPVNVRLPSYYRPGEEGEVDERLADQISAGKFPLLSGPTALTAPYPNPSHVI
                     DAMLTGEPYPVKALWTDCNPMVGLEDSYKVLEALKTLDLLIVSDMFESPTAHLADYIL
                     PVTNHLESNAITEYSGLNMISARVKCTEPRGEVREEADAVMEVARRMGYGDKMPVQSY
                     DELLDYRLAPLGITFEEFTEMGSFVGPDERGKHASGKLRPDGEPGFMTPSGKIEFTSG
                     QLEKYGYDPLPQVQEPMFSPLDDNGEATELSTDYPLVLVTGTRAVEYYSTLGISIPRL
                     RKRRPWPGLEMSPETAEEFGLMEGDWAKIKVPTTENSIVRQVALIPGMHPRVINAEGL
                     WYMPGEDLIEGTLKVGANVLTPLRDDIDPVMGGSTARCLLCRITKVEDQVTAIAAE"
     gene            complement(3242..>3547)
                     /locus_tag="QF359_10345"
     CDS             complement(3242..>3547)
                     /locus_tag="QF359_10345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87351.1"
                     /translation="PFLWVFNPALILIGNPLAIALAVSSAVIGGWMLARALQDFSATK
                     ALGLIWALVLLLSAIFIGGSTIWLGSESLLVVVVSAVGLACLLYLRRRDKQSELETA"
BASE COUNT          888 a          919 c          929 g          811 t
ORIGIN      
        1 cgcaggtttc tagggttttt cagatcggtc gtagcccagg gctcgccgac cattggcgtg
       61 ccaccgctat gtccggagcc taaaacggta attttcatgc agaaaccggt cgtttagctt
      121 tagaaaatag gcgaaagaag ttagcagtcg tctgttcagc cagctcttga ggagaaatat
      181 caaagatttc tgccgctttt ttggccgtat gagtgacata agccggctcg tttggctttc
      241 cacgatgtgg aattggtgcc aaaaagggtg cgtcggtctc aactaaaata tgctccaagg
      301 gcacggattt cacggattcg cggatcggtt cagcggaatt aaaggtaatc atgccggata
      361 acgagatcgc catgccataa ttgacggcgc atttcgccag ttcaggcccg gcgctaaaac
      421 agtggataag tcctggaaat gcgccctttt gctgttcctc atcgataatc gagatggtcc
      481 gctcatcggc atcccttgta tggaccacga ccggcagctg agtttcccgt gccgctgcga
      541 tatgagtacg gaagctgcgt tcctgagcct cacgcggtga attatcatag tagaaatcaa
      601 gtccggtttc gccaataccg ataacttttg gatgtttggt cagtttaacc aaggtctcaa
      661 catcagtttc agactcatta ccggactcgt gcggatgaat gccgactgta caggcgacat
      721 tgtcatgagc cgcggcggtc gccaaaacac cagcgaaatc gcgcaatctg gtgctgattg
      781 agagcataaa gccaacccca gattcactgg cacgcgaaat tgcgccctcg atatcttcac
      841 gaagaccgtc gtaatttaag tgacaatggc tgtcgacaag catagatccg ggcatgtaat
      901 tctttcacta tttggacttt ggaggcgctt tgtagcaccc tcctcccaat aaagctattc
      961 cgcttagcct atacattctg tatggttaaa gcagcgtaaa ctgaagcgaa agaattgtcc
     1021 catgtcgatg atccaaacca cttgccgatt gtgtctcgtg cgttgcggga tgctggtcga
     1081 aaccgaagac gtgccgaaca ccactggctc agctgcaaac tctcctctgg ggaaaatcaa
     1141 gaaattcatc ggtgatcgca aacatccttt gagtcagggc tacctctgtg tcaaaggaaa
     1201 agcctccctt gacatgatgg aagccgaaga ccgtgtgatc tatccacaaa aacgcgtcgg
     1261 tgagcgtggc tccggtcaat gggagcgggt cagctgggac gacgccctgc aagacatcgc
     1321 cgagcgcatg aacgccatca ttgatgaaca tggcgcccgg gcaattgccg tgcaagctct
     1381 gccacccaag gaatactatg cctatgattt attcctagaa gccatcggca gcccaacttt
     1441 tttcaaacac gatgcacata actgcttcac accgcaattg atgtcggacg tgctgacctt
     1501 cggcatgttg acgacctata tcaatttcaa aaatgttgaa gactgcgaga ccatcgttct
     1561 ttggggcgtc aatttgaccg agaccaacgg ctcgaaggcc gtccgggtca aagatgctaa
     1621 gcgcaaacat ggtgccaaaa ccatcgtggt tgatccgcga ccaacccgct ccgcccggga
     1681 ggctgatctc tggctgcgta ttagaccggg caccgatgac gcgctggcca tgggcatgat
     1741 caatctgatg atcgaaaatg gctggtatga cgagcaattt gttaaagact ggaccatcgg
     1801 ctttgatgaa ttgaaagccc gtgctgctga ctacacatta gagcagacct ctaagacgac
     1861 ctggatacaa gaagcggata ttcttgaagc aacccgcctg tttgcgactt ccaattcgtc
     1921 ggcgctttat acctttattg gcgcaacgat gggcggaaat tcgatctcaa ccttgcgact
     1981 gatgggcttt ttaccagctt tgacaggccg cctggatcaa gccggcaata actgcattca
     2041 taagccagtc aacgtcaggt tgccgagcta ttaccgcccg ggtgaagaag gtgaagtaga
     2101 tgaacgcctc gccgatcaaa ttagtgccgg taaattcccc ctgttgagcg gaccgaccgc
     2161 cctcacagcg ccctacccta atccgtcgca tgtcattgat gccatgctga ccggtgagcc
     2221 ctatccggtt aaggccttgt ggactgattg caacccgatg gtcggtcttg aggacagcta
     2281 caaagtattg gaggctttaa aaacgctcga tctgctgatc gtctccgaca tgttcgaaag
     2341 tccgacagcg catctggccg attatattct gcccgtgacc aatcacctgg aatccaacgc
     2401 catcaccgaa tattccgggc tcaacatgat atctgcgcgg gtcaaatgca ccgaaccccg
     2461 cggtgaagta cgcgaagaag ccgatgccgt gatggaagtg gctcgccgca tgggctatgg
     2521 cgacaagatg ccggtacaga gttacgatga attgcttgac tatcgtctgg cgcctctcgg
     2581 tattactttt gaggaattca ctgaaatggg ctcttttgtc ggcccggatg agcggggcaa
     2641 acatgcatca ggtaaactcc ggcctgatgg agagcctggt ttcatgactc cgtccggtaa
     2701 gatcgagttt acttctggac agcttgaaaa atatggttac gaccctctgc cgcaagtgca
     2761 ggaaccgatg tttagcccgc ttgatgataa tggtgaggca actgaactgt caaccgacta
     2821 tccattggta ctggtgaccg gcacgcgggc tgtcgagtat tactcaactc tcggcatctc
     2881 aatcccacgc ctacgcaaac gtcgcccctg gccgggtctc gaaatgagcc ctgaaacagc
     2941 cgaagaattt ggcttgatgg agggtgattg ggccaaaata aaggtaccaa caactgagaa
     3001 ctcgattgtc cgccaggttg cgctgatccc cggcatgcac ccccgcgtta tcaatgccga
     3061 agggctgtgg tatatgccgg gtgaggattt gatcgaaggt acgcttaaag tcggcgctaa
     3121 tgtgttgacg ccgctgcgcg atgatattga tccggtgatg ggcggctcaa cagcacgctg
     3181 tctattgtgt cggatcacaa aagttgaaga tcaagtgacg gcgattgctg cggaatagag
     3241 attaagcggt ttcaagctca ctttgtttat ctcgccgacg caggtacaag aggcaggcca
     3301 gcccgacggc tgagaccacg acgacgagga gtgattccga tccgagccat attgttgagc
     3361 cgccgataaa gattgcactt agaagcagca ccaaagccca aattaagccg agcgctttcg
     3421 ttgccgaaaa atcctgcaag gcacgggcca gcatccagcc accaataaca gccgatgaaa
     3481 cggccagtgc aatcgccaaa ggattaccga ttagtatcaa cgccgggtta aagacccaaa
     3541 ggaacgg
//
LOCUS       DASCNL010000784         2201 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001623438, whole genome shotgun sequence.
ACCESSION   DASCNL010000784 DASCNL010000000
VERSION     DASCNL010000784.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001623438"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(224..1909)
                     /locus_tag="QF359_10350"
     CDS             complement(224..1909)
                     /locus_tag="QF359_10350"
                     /inference="COORDINATES: protein motif:HMM:NF013086.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO87352.1"
                     /translation="MTGITSQSFETDVLIVGGGAAATLAAFECAEAGVHSIQVTKGRA
                     TSGTTTVARGGFAAAIGKDDSPELHLKEILEHGGELIDPELAAVWTRDIIQVVNDLEA
                     WGTDFVKGDSGALDLKSFPGHSQPRAVHHYDTTGNRLTKALSAKLRTDDRIEKHSLTS
                     IVDLTKEGKRVTGAWGVDYGTGTLVSYTAKEVILCTGGGSGLFYVNDNPPQVTGDGYV
                     LGYRAGAPLLGIEMIDFQAMCCSPEELFGFAPHPTGFINAGAVFKNQDGEEFLKRYYP
                     DTAEQSTRAEVILAMAREIHAGRAGLTGGIFMDATAVPLETIEKMIPHVYKTCLHRGI
                     DITKTPLEVAPGSHTWLGGLKIDIDGKTPVPGLWAAGETAGGIHGGNRIGGSALSASL
                     VFGRRAGKMASERVATDDAPAPVTIPAEAADWLGDLIARKDGPLQADVRLKCRMLAHE
                     KLGSIRTKEQCEEATTEYQRIEAVDVPAMRLSDEAHNSEKALGQELESALSIKNLSLL
                     GRLLGTAALHREESRGAHFRLDFQDTDDQNWRVVTRLEQGTGREISFNTDTAF"
     gene            complement(1906..>2201)
                     /locus_tag="QF359_10355"
     CDS             complement(1906..>2201)
                     /locus_tag="QF359_10355"
                     /inference="COORDINATES: protein motif:HMM:NF018498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Tm-1-like ATP-binding domain-containing protein"
                     /protein_id="HJO87353.1"
                     /translation="EMTQLGEMVAERLNRAKGPVSMMIPTKGFSQHIIRKTQDINGNE
                     IGTWLQPETDQCFTDAVKANLTSSEVKELDLHINDEAFADACVDEFLALMKQA"
BASE COUNT          486 a          624 c          554 g          537 t
ORIGIN      
        1 tggcacaacg caatccttat gtattttcac tttcataccg tcgcatcgca tacaaagtag
       61 taacaaatag taacacaaac ctctgcgtaa cggtgtctag taatgtcacg taatgttact
      121 tatatatcgc agaaaatcaa ggaaaatatg gttacttgtc gtgggctgtc tacttatgac
      181 atggaagggt acgtgtactt gttacgtgtc cccattaatt tctctaaaaa gcggtatcgg
      241 tgttgaaaga tatctctctg ccagttccct gctccagtct ggtcaccacc cgccagtttt
      301 gatcgtcggt atcttgaaaa tccaagcgga agtgagcacc gcggctttct tcacggtgga
      361 gcgcggcggt gccgagcaag cgcccgagca gtgacaggtt tttaattgag agcgcacttt
      421 cgagctcctg gccaagtgct ttctcagagt tatgcgcttc gtctgatagc cgcatcgccg
      481 gcacatcgac cgcttcaatg cgttgatatt cggtggttgc ttcctcacat tgttctttag
      541 tcctaatcga gccgagtttt tcgtgagcca gcatgcggca cttaagccgc acatcagctt
      601 gcaacgggcc gtctttgcgg gcgatcaaat cgcctagcca gtcggctgct tccgctggaa
      661 tggtaacggg tgcaggcgca tcgtccgtag ccacccgttc agaggccatc ttgcccgccc
      721 tgcggccaaa gaccaaagaa gcagacagcg ccgagccacc gatgcggtta ccgccatgaa
      781 taccaccagc ggtttcgcct gccgcccaaa gccccggcac cggcgttttg ccatcaatat
      841 cgattttgag cccgcccagc caagtatggg agccgggcgc gacttccaag ggcgtcttgg
      901 tgatatcaat gccgcgatgg aggcaggtct tatagacatg cgggatcatt ttctcaatgg
      961 tctcaagcgg taccgccgtc gcgtccataa aaatgccacc ggtcagcccg gctctccccg
     1021 catgtatttc ccgggccatc gccaagatca cttcagcacg ggtcgattgc tcggcggtat
     1081 ccggataata gcgtttgaga aactcctcac cgtcctggtt cttaaacacc gcgcccgcat
     1141 tgataaagcc ggtcggatgc ggcgcaaacc caaacaattc ttctggtgag cagcacatcg
     1201 cctgaaaatc aatcatctcg atgcccagaa gcggcgctcc ggcccggtag cccaagacat
     1261 agccgtcgcc ggtaacttgc ggcggattat cgttgacata aaaaaggcca ctgccgccgc
     1321 cggtgcagag aataacttct ttggccgtgt aagaaaccag ggtgccggtg ccgtaatcaa
     1381 ccccccaggc accggtgacc cgcttaccct ctttcgtcag atcaacgata gatgtgagag
     1441 aatgtttttc gatccggtca tcggtgcgca gttttgcaga caaagccttg gtcaacctat
     1501 tgccggtggt gtcgtagtga tggacagctc gaggctggct gtgaccggga aaggatttga
     1561 gatcaagcgc acccgaatca cctttaacaa agtccgtgcc ccaggcttcg agatcattga
     1621 ccacctggat aatgtcgcgg gtccaaaccg cggcgagctc gggatcgatc aattcgccgc
     1681 catgttccaa aatctctttg agatgcagtt ccgggctgtc gtctttacct atcgctgctg
     1741 caaaaccacc tctcgccacc gtcgtcgtgc cgctggtcgc ccggcctttg gtcacctgga
     1801 ttgagtgcac accggcttcg gcacattcaa acgccgccaa tgtcgctgct gcgccaccgc
     1861 caacaattaa aacatcggtc tcgaacgatt gtgaggttat cccggtcatg cttgtttcat
     1921 caatgcaagg aattcatcaa cgcaggcatc ggcgaaggct tcgtcattga tatggagatc
     1981 aagctcttta acctcgctgc tggtgagatt tgctttcact gcgtcggtaa aacattgatc
     2041 cgtttccggt tgcagccagg taccgatctc gttgccatta atatcctgag ttttgcgaat
     2101 aatatgctgg ctaaagcctt tcgttggaat catcatcgat accgggcctt tggccctgtt
     2161 taaacgctcg gctaccattt ctccaagctg ggtcatttcc t
//
LOCUS       DASCNL010000785         1873 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001626369, whole genome shotgun sequence.
ACCESSION   DASCNL010000785 DASCNL010000000
VERSION     DASCNL010000785.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001626369"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="QF359_10360"
     CDS             complement(<1..253)
                     /locus_tag="QF359_10360"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJO87354.1"
                     /translation="MGDFLIYEQDGSVVALALNSPDTRNALSHPAEYQQIIDACERIN
                     LDTSVGAVILTGAGTSFCAGGNVKDMKEQSGMFSGDPLEI"
     gene            713..>1873
                     /locus_tag="QF359_10365"
     CDS             713..>1873
                     /locus_tag="QF359_10365"
                     /inference="COORDINATES: protein motif:HMM:NF017828.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase family protein"
                     /protein_id="HJO87355.1"
                     /translation="MAIQEVSQDSISKPIHAATMSGEDDMVGRGVKEGAELFRVWFNE
                     LSTVAENGGGAAYVFVMGSMNEVLKTFDMPVSFPEVNALQTAIRRVSRDYLNEAEDYG
                     YSPDICGYVKADVAMQLAGGKHPMGNIPKPSIAVLTNACNTYIKWAEIWERLHKTPSY
                     TMDIPGTRCFGDKSQPGSEDFKFEAKYVLGQIKEMIELCEQVSGIKFDSDKFREVLGY
                     ANRMSDKWDKIIRLNANQPAMFNALTDGTVYLGMANGFRGTEEGAVYFDRLYEEMVYR
                     AENDIGIRLKGENGPYEMDQQFRLAFVGVPCYPIFSSFNNMFTDWGGVFVTSSYLWFA
                     SGGTSAGIQYDLDNPLESFAEGQLLMVREAMDSMFNQAYTMREASKEFALDGV"
BASE COUNT          501 a          446 c          444 g          482 t
ORIGIN      
        1 tgatttccaa cgggtctccg ctaaacatgc cggattgctc tttcatatcc ttaacattgc
       61 ccccggcgca aaagcttgtt cccgcgccgg tcaaaataac cgccccgacg ctggtatcga
      121 ggttgatccg ctcacaggcg tcaataattt gctgatattc tgcaggatgc gacagcgcgt
      181 ttcttgtatc cgggctgttg agggccagag cgacgacact gccatcctgc tcataaatta
      241 aaaaatcacc catcggatac tccttagttt atttggcacc agcctaaata tttaatcctc
      301 atcacaacgc cattagcatg aagatttctg gattccggat caagtcctga atgacggcag
      361 agtggaaaag tgcctcactg acaatattcc tccctctatc ttcgtcaccc cagcctcgag
      421 ccgggatcca gtttcttcgg aagaaaggga cacttaattt aagggaacac catacctaat
      481 tttattccaa ctagatcatt taaggaatta ttggtgacac gtaacgagta catgtcccca
      541 taattccccc tatgccgcat tccataaatg ctaattatct aattttcgtt gacaacgctt
      601 gctaaccata ctcaaattag gattataaca attaaaaaca gtagggaatg ttgctaaaaa
      661 cgattgctaa aatctattca atttacgctg gataatcacg taggaaataa ctatggccat
      721 tcaagaagta tcacaggact caataagtaa gcccattcac gccgccacaa tgagcggtga
      781 ggatgatatg gttggccggg gcgtcaagga aggggctgag cttttccgcg tttggtttaa
      841 tgagcttagc actgttgccg aaaatggtgg tggcgcggct tatgtgtttg tgatgggcag
      901 catgaacgaa gttttgaaaa cttttgatat gccagtgagc tttccggaag tgaacgctct
      961 gcaaacagcg attcgccgag tttcacggga ttatctaaac gaggctgaag attacggtta
     1021 ttcaccggat atttgcggct atgttaaagc cgatgtggcg atgcaattgg ccggcggcaa
     1081 acatccaatg ggcaacatcc ccaaaccgag catcgccgtg ctcaccaatg cctgcaacac
     1141 ctacatcaaa tgggccgaga tttgggagcg gctgcataaa acaccctcct acaccatgga
     1201 tatacccggc acccgatgct tcggcgataa aagtcagcct ggcagcgaag atttcaaatt
     1261 tgaagcgaaa tacgtgttgg gtcagatcaa ggaaatgatc gagctttgtg aacaggttag
     1321 tggtataaaa tttgatagcg ataaattccg cgaagtcctc ggctacgcca atcggatgag
     1381 cgacaaatgg gataaaatta ttagactaaa tgccaatcag ccggcgatgt tcaatgcctt
     1441 gaccgacggt accgtgtatc tcggtatggc caacggcttt agaggcaccg aagaaggcgc
     1501 cgtttatttc gaccgccttt acgaggaaat ggtttaccgc gccgaaaatg atattggtat
     1561 ccggcttaaa ggtgaaaatg gcccgtacga aatggatcag caattccgcc tcgccttcgt
     1621 tggtgtgccg tgctacccga ttttctcgag cttcaacaat atgtttaccg attggggggg
     1681 cgttttcgtc acctcatcct atttgtggtt tgcctctggc ggcaccagtg ccggcattca
     1741 atatgatttg gataatccgc tcgaaagctt tgccgaaggc cagctcttga tggtgcgcga
     1801 agccatggac tctatgttca atcaggccta cacgatgcgc gaagcatcta aagaatttgc
     1861 tctcgatggt gtg
//
LOCUS       DASCNL010000786         7810 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001627379, whole genome shotgun sequence.
ACCESSION   DASCNL010000786 DASCNL010000000
VERSION     DASCNL010000786.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 7810)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7810)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7810
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001627379"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(530..1561)
                     /locus_tag="QF359_10370"
     CDS             complement(530..1561)
                     /locus_tag="QF359_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJO87356.1"
                     /translation="MTQSMTLRVAVIGAGYFGQFHHSAWNRLPGARLVGIADLDGEKA
                     AQSAARYGIPNFTDYNAMFDAVEPDLVDIATTPDSHLELVAASAMRGLPVICQKPLAS
                     TYDEAVAVVEAAEEAGTLLVVHENFRFQPWYCEMHRLIEAGHLGAIHGVAFRLRPGDG
                     QGERPYPDRQPYFRDMERFLVHETAIHFIDTFRYLLGDIVGVVAQLRRLNPHIKGEDS
                     GLIIFDFAGGQTGLFDGNRLNDHAADNTRRTMGEMWLEGSAGVMRLDGMGRLWWKPHN
                     GIETEHKYTWKDDGFAGDSVYAFQAHVLNYLQHGRRLENTGREYLRNLEIEEAVYRSS
                     AIGRYVATS"
     gene            complement(2173..3492)
                     /locus_tag="QF359_10375"
     CDS             complement(2173..3492)
                     /locus_tag="QF359_10375"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO87357.1"
                     /translation="MSPDILGLVLLVMLFAGIFVGFPIAFTLIILATGFGYFVYGQSV
                     FYQMYFQTLGLMSETTLAAAPLFIFMGYILERAGLMERLFRSFQFVLAPVRGSLFLGV
                     LATATLFATATGIIGASVTVMGMMAAPAMMKAGYDPKMSAGVIAAGGCLGILIPPSVM
                     LLVMGPVVGVSVIDLFAAALIPGLILASLYTGYAMIRSYLDPSLGPPLPQDQRATSYK
                     QIIVEFASGIVPLAVIMFSALGSIILGIATPTEAAGMGALGATVLTIAYGRFSWEVLL
                     DTCRRTMTTASLVLFLAVASNIYGAVFTRLGTGTLLTDTMLSMPLPPLGLMAVLMIVI
                     FILGWPLEWPAVVFIFLPVFIPIVTALDFNLVWFSTLVAVNLQTAFLSPPVAMAAYYL
                     RAVAPQWSLGEIYRGMGAFMVLQLIGLLIVFFFPETALWLPGVLFPK"
     gene            complement(3489..4040)
                     /locus_tag="QF359_10380"
     CDS             complement(3489..4040)
                     /locus_tag="QF359_10380"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HJO87358.1"
                     /translation="MNLKLERIFRIVAGVIDAINDWLGGWIFALLALPLLYAVCHEVI
                     SRYVFDAPTDWSYEVTYMVYGAFFMLGSAYTLLKGGHVRTDIFYLNWSFRRRGIIDAT
                     LYFFCFFPGLILFFWIGLVEANHAYIISEHSDATPWMPPLTPFKSTIPLAAALLIMQG
                     VSEFLKSLYAAITGRQLLTGREQ"
     gene            complement(4231..5310)
                     /locus_tag="QF359_10385"
     CDS             complement(4231..5310)
                     /locus_tag="QF359_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HJO87359.1"
                     /translation="MPISKNSNCEETMKAVVFLGDRKLEFMEFPDPTPGPGEAVIEIK
                     ASGMCGSDLKFYRVAGGAAALGLVGDSGPIIAGHEPCGIVAAVGEGVPVAMAKAGDRV
                     MVHHYSGCGVCKHCREGWSQLCIDGTTVYGATGHGAHAKFMKVFAHTLVKLPDELSFK
                     TGAAISCGTGTAYGALKRLNLAGDETIAIFGQGPVGLGATQLAKAMGARVIALDIGKE
                     RLELARQFGADEMIDPRSNNVVTAIRDLTHGEGVQKSLDCSSSPEARRAAVQCVRTWG
                     TACFVGEGGDVMIDVSNDMLRRQVTVVGSWTFSKNGQADCAAFVAERKIDVDGLFTHE
                     FKLEEAEEAYRLFDTQTTGKGVFVM"
     gene            complement(5369..6481)
                     /locus_tag="QF359_10390"
     CDS             complement(5369..6481)
                     /locus_tag="QF359_10390"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO87360.1"
                     /translation="MFRLKYLLPSLLALLLGVTAFTTVSNEAAAAEKIKLKVQAAFPS
                     STKLFKSFNIMNERVKAMSNGRLEMELFPGGAIVPSFQVLDATARHVLDGGFSAAAYY
                     VGKNRAAALFGPAPGGPYGFDWIDYFGWIHDGGGLALYNEFFQKVLKRDVVVFPMTAV
                     GNQVLGWFDRPVKGWHDLKDIKCRATGLTGEVLSKSGMKTVNMSGGEILPSAERGIIN
                     CGEWAGPGEDIAMGFHQVWKHYYMPSVHEPATILELLINGEVWRKLPPDLQEIVKSAI
                     WETTLRYQILTHRQNAEALVKIRAAGVTVHRTPDSILQGILDAWEDIVASESAKNPFF
                     KKVLASQKKYAALVIPTRRAVQVDYNWLANHYWPEK"
     gene            6678..7307
                     /locus_tag="QF359_10395"
     CDS             6678..7307
                     /locus_tag="QF359_10395"
                     /inference="COORDINATES: protein motif:HMM:TIGR03717.1"
                     /note="Members of this highly hydrophobic protein
                     family,regularly are found preceded by the yybP-ykoY
                     manganese riboswitch (see RF00080). A metal cation
                     transport function is proposed; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YjbE family putative metal transport protein"
                     /protein_id="HJO87361.1"
                     /translation="MSLIENLLPITQIIFADIILSGDNALVIGMAAATLPLQLRKKAI
                     FLGMALAAGLRIFFAVIATFLLQVPVIIFFGGLLLAVVCWRFFQDLRNQEAKKVGDAS
                     GLKGHAGSSRQTLWRALFTITFADVSMSIDNVAAVSAIARDDTALLVFGLALAVLLMA
                     LCATYIMKILTRFPFLSWLGLLFLIYLTFKMLYDGWPAFAELIMVTGSS"
BASE COUNT         1907 a         2219 c         1962 g         1722 t
ORIGIN      
        1 tacactggca ccgagacggt ggaagggttc tgcaccaagc tgccgggaca ggcgcgcacg
       61 gagccggagc tgtttgccct gaccggtccg tccagcccct gggtcggcgt taacgatccg
      121 caaaaagagc tgctctaaaa acgccgccga aaagcataat gtggacgccc ccatccggcg
      181 gccagccggt gggggctaca ccgcttgcgc cggcgccgcc tgatctggcg gctggggtga
      241 gacaaaatgc cctatcctcg gcgggtctcg gcttgtctaa gctgaaattt cccctatgac
      301 tagtctccta aagaccaagc tagtcttcct aaagaccagc tagcgccgct tccaactctt
      361 cctcggccgg ccgtgttcct tgcccatttc gtagccccga cgcaggcttg gacgggtttt
      421 caatagatcc tacaaacggc gcacgttggg aaactggtcc tggtccgcga tattaacaac
      481 aaaaatacac tcggtcgccg tcaagaacca cgcacggtgc actcaatagc taggacgtag
      541 caacgtagcg acctatcgcg gacgagcgat aaaccgcttc ttcgatttcc aaatttcgca
      601 aatattctcg acccgtattt tccagtcgcc tgccatgctg caagtaattt agaacatggg
      661 cctggaaagc atagacacta tcaccagcaa agccgtcatc tttccaagta tatttatgtt
      721 cggtttctat accattatgg ggcttccacc aaagcctacc catgccgtcc agacgcatta
      781 cgcccgccga accctcaagc cacatttcac ccatagtgcg cctagtatta tcggccgcgt
      841 gatcatttag gcgattaccg tcgaacaggc cggtctgacc gccagcaaaa tcgaaaataa
      901 ttagaccaga atcttcaccc ttaatgtgag ggttgaggcg gcgtaattgg gccacgacgc
      961 cgactatatc gcccagcaga taacggaagg tatcgatgaa atggatcgcg gtttcatgca
     1021 ctaaaaaccg ttccatatct cgaaaatagg gttggcggtc aggataaggg cgttccccct
     1081 gaccatctcc aggccgcaaa cggaaggcga caccatggat agcgcccaaa tggccagcct
     1141 caatcaatct gtgcatttcg caataccagg gctgaaatcg gaagttttcg tgcacaacca
     1201 acagtgtgcc ggcctcctcc gctgcttcca ccacggccac agcttcatcg taggtcgagg
     1261 ccaaaggttt ttggcaaatt accggcaggc cccgcatcgc acttgcagcg actaattcaa
     1321 gatgagagtc aggtgtggtc gctatgtcca ccaaatctgg ctccactgca tcaaacatgg
     1381 cgttgtaatc ggtaaaattc ggaataccgt aacgagcggc agactgcgcg gccttctcgc
     1441 catctagatc cgcgatgccg accaacctcg cgcccggtaa acggttccaa gcagagtggt
     1501 ggaattggcc aaaataacct gctccaataa ccgccacgcg caaggtcatt gattgggtca
     1561 tttattgctg ctcataggtg cgcgcccaat gcgataggac aaagcacgat atgtggagtt
     1621 tgcattggca tctcctttgt tggatacccg agcctatcgg atcctattgt ggtgatccat
     1681 agggagtaac gcgcgaccac caaagatttc cagtcacagg attttggatg aggggtttaa
     1741 tactcgaagc aactgaccgg tacatggcaa cacgactatc agccggactg gatgaacggg
     1801 tggcgctaaa ttgggtttga tggcatgccg tgtagccgct gatctgttgc aatgaaaaag
     1861 aacgacctct gtacagacta ctcaaacagc agctacaccc agagctacaa aacgtgcctc
     1921 gaaggaatcc gtgcggattc gtctgaaatc ttacctattt ctacgtctga atctggcgac
     1981 gactatctag tcagcgttgg acaaagcacc accgcggatt acaccgctag cgggcctgca
     2041 tcacccgcaa cagcgacggc gaacgactga ctactgacag cggcgcctgc taggttgtcg
     2101 ccaacaggct agccagtacc gccgaacgct ccaggttcaa aatgttgcat cctttattcg
     2161 atatagaccc aatcattttg ggaaaagcac gccgggtagc caaagagcgg tttctgggaa
     2221 gaagaaaaca atcaacaagc caataagctg aagaaccatg aatgcgccca tgccgcgata
     2281 gatttcgccc agagaccatt ggggcgcaac ggctcttaga taatatgcgg ccatggctac
     2341 cggcggtgac agaaaggcgg tttgcaagtt gaccgcgacc agtgtgctga accaaaccaa
     2401 attgaaatcc agagcggtga caatcggtat aaataccggc aagaaaatga acaccaccgc
     2461 aggccattcg agcggccagc ccagtatgaa aatgacaatc ataaggaccg ccatgagacc
     2521 aagtggcggc agcggcattg acagcatggt gtctgtcagc agagtgccgg tgccaagacg
     2581 cgtgaagacc gcgccgtaga tgttggaagc aaccgcaaga aagaggacca ggctggccgt
     2641 agtcatcgtc cgcctgcagg tgtcgagaag cacctcccac gaaaatcgac cgtacgcaat
     2701 tgtcaacaca gttgctccca aagcacccat tcctgctgct tctgtcggcg tcgcgatgcc
     2761 gaggatgata ctgcccaagg ccgaaaacat gatcacggct agaggcacga ttccagatgc
     2821 aaattcgacg attatctgct tgtatgaagt cgcgcgctgg tcctgtggta ggggcggacc
     2881 caagctcggg tccaagtaac ttcggatcat cgcataccct gtgtaaagcg aagctagaat
     2941 cagcccggga atgagggccg ccgcgaacag gtcaataaca gaaacgccaa ctacagggcc
     3001 catgacaagc agcatcacgc tgggagggat caaaatgccc aaacaaccac cggcggcgat
     3061 gacgccagcc gacattttcg ggtcatagcc tgctttcatc atagcgggcg ccgccatcat
     3121 acccatcacg gtgaccgacg cgcctatgat acctgttgcg gtcgcaaaga gcgtggcagt
     3181 tgctaagaca ccgaggaata gggatccgcg caccggcgca agaacaaact ggaatgatcg
     3241 aaataatcgc tccatgagcc cagcacgttc aagaatatac cccatgaaga tgaaaagagg
     3301 cgctgctgcc agcgtagttt ctgacataag ccccaatgtt tggaagtaca tctgatagaa
     3361 tacagattgg ccatagacga aatagccaaa cccagtcgcc aaaataatca gggtgaatgc
     3421 gatcgggaag ccgacgaaga tgccggcgaa aagcatcacc agaagtacca gacctaatat
     3481 gtcagggctc attgctcccg tcccgttaga agttggcgtc cagtaatggc ggcgtaaaga
     3541 cttttgagaa actcagaaac gccttgcatg atcaacaaag cagcagcgag aggtatggtg
     3601 ctcttaaatg gagtcaaagg gggcatccat ggtgtggcat cggagtgttc gctgattatg
     3661 tatgcgtgat tagcttccac caaaccgatc caaaaaaaca aaatcaatcc ggggaaaaaa
     3721 cagaaaaaat acagagtggc gtctataatg ccacggcggc ggaatgacca gttaagataa
     3781 aagatatccg ttcgtacatg accgcctttc aaaagtgtat atgctgagcc gagcatgaaa
     3841 aaagcgccat acaccatata ggttacttca taggaccagt cagttggcgc gtcgaacaca
     3901 tatcgagaaa ttacctcgtg gcaaaccgcg tacaggagtg gcagagccaa aagagcgaaa
     3961 atccatccgc ccagccaatc gttaatcgca tcgattacgc ccgcgacaat tctaaatatt
     4021 cgctcgagtt taaggttcat cacgctggct gccttatacc gcattcctta aaatatttaa
     4081 cttgtgcgtt ctttcatttc tagtttcgca ggtccaagca tcctcaaatc aacaatatca
     4141 gcaatcgagc ttgctaagct aatccgtgaa gtgcgtgatc aaatataggc gcttgtcacc
     4201 gtgtcggtgc aggccgattt gctctattgg ctacattacg aatacgccct tcccggtcgt
     4261 ctgcgtgtca aacagcctat aggcttcttc cgcttcctct agcttaaatt catgggtaaa
     4321 gagcccatcg acgtcgatct tacgttccgc gacgaaagcc gcgcaatcgg cttggccgtt
     4381 cttactgaag gtccaggaac cgaccacggt cacctgacgg cgcagcatat cgttggagac
     4441 atcgatcatg acgtcaccgc cctcgccaac gaagcaggcc gtgccccatg tgcgcacaca
     4501 ttgcaccgcg gcgcgacgcg cctcgggact tgagctgcag tcgagtgact tctgcacgcc
     4561 ctcgccatgg gtcagatcac ggattgccgt taccacgttg ttactgcgcg ggtctatcat
     4621 ctcgtccgcg ccaaactgcc tagcgagctc aagccgttct ttcccgatgt cgagggcaat
     4681 cacccgcgcg cccatcgcct tggcgagttg cgtagcgccg agcccaacgg gcccttggcc
     4741 aaaaatagcg attgtttcat cccccgcgag gttgagccgc ttcagagctc cataggctgt
     4801 ccccgtgccg caagagattg ccgcacctgt cttaaacgac agttcgtccg gcagcttcac
     4861 cagcgtgtgc gcgaacacct tcatgaattt tgcatgagcg ccgtgtccgg ttgcgccata
     4921 aaccgtcgtt ccgtcgatgc agagttgcga ccaaccctcg cggcaatgct tgcaaacgcc
     4981 gcagccgctg taatggtgga ccatcacccg gtcgccggcc ttggccatgg ccaccggcac
     5041 gccttcgcca actgcggcca caataccgca gggctcgtgc ccggcgatga tgggaccact
     5101 gtcgcccact aagcccaatg ccgcggcacc acccgcgaca cgataaaact ttaggtcgct
     5161 gccgcacatg cccgaagctt tgatctctat caccgcctcg cctggacctg gtgtcggatc
     5221 gggaaactcc atgaattcaa gcttccggtc accgagaaaa accactgcct tcatcgtttc
     5281 ctcacaattc gaatttttgg agattggcaa gaaacgctgc ccgcaattag cgggcagcgt
     5341 aacctcctgc accttcacac tggtcggtct acttctccgg ccaataatgg ttggccaacc
     5401 aattgtagtc gacttggaca gcccgccgcg tcggaatcac gagcgcggca tacttcttct
     5461 gcgatgctag cactttttta aagaagggat tcttagcaga ctcacttgct acgatatctt
     5521 cccaggcatc aaggatgccc tgcaaaatac tgtcgggcgt gcggtgaacc gtaacgcctg
     5581 ccgcacgaat tttcacgagc gcctctgcat tttgcctgtg cgtcaggatt tgatagcgca
     5641 aggtcgtctc ccaaatcgct gacttgacaa tttcttgcag atccggcggc aacttacgcc
     5701 agacttcgcc gtttatgagg agttccaaaa tcgtcgcggg ctcgtggacc gaaggcatgt
     5761 agtaatgctt ccagacctgg tgaaaaccca tcgcaatatc ttcgcctgga ccggcccatt
     5821 cgccgcaatt gatgatacct cgttcagcgg acggcaatat ttcgccgccg gacatgttga
     5881 ccgtcttcat gccggacttg gataaaactt cgccggtaag accggttgcg cggcacttga
     5941 tatcttttag atcgtgccaa cccttaacgg gtctatcgaa ccagccgagc acctgatttc
     6001 caacggccgt cattggaaag acaaccacat cacgcttgag cactttttgg aaaaactcgt
     6061 tgtatagcgc tagaccgcca ccgtcatgga tccagccgaa gtaatcgatc caatcaaaac
     6121 catagggacc gcccggagca gggccaaaca atgctgcagc acggtttttc ccgacatagt
     6181 aagcggctgc tgaaaaacca ccgtcgagca catgacgcgc cgtcgcatcc aacacttgaa
     6241 atgagggtac gatcgcaccg cccgggaata actccatttc gaggcgacca ttcgacatcg
     6301 ccttcacgcg ttcattcata atattgaagc tcttaaaaag cttcgttgac gacgggaatg
     6361 cagcctgtac ctttagcttg attttttcag ccgctgctgc ttcgttgctc accgttgtaa
     6421 acgccgtaac acccaaaaga agcgcgagca aagaaggtaa caaatacttt agtctaaaca
     6481 tgtaaaagcc ctcccaacgt taatttgttt gtttcttctc aaatcacaga aaaatcaaac
     6541 cacaaacaaa gtcttagtgc aatgatggaa aaccggaagc ggactcaagt catctcaggt
     6601 ctagagggcc ggagacgttg tcgaggccgc tgtcacaaac atggcaacac taaggaattc
     6661 ggttggagta tgtcgctgtg tctctgatcg agaacctttt gcccattacc cagattattt
     6721 tcgccgatat cattttgtca ggcgacaatg cgctggtgat tggcatggcg gcggccaccc
     6781 tcccgcttca gttgcgcaaa aaagcgatct ttctcggcat ggctctggcc gctggattgc
     6841 gaattttctt tgcggtcatt gcaacatttc tcctccaggt ccccgtcatt atattttttg
     6901 gcggcctatt actcgctgtg gtgtgctggc ggttttttca agacctacgc aaccaagagg
     6961 caaagaaagt aggggacgcg tcgggattaa agggccatgc cggatcttcc cgtcagactc
     7021 tatggcgagc gctttttacg atcacattcg ccgatgtttc catgtcgatc gacaacgtcg
     7081 ctgccgtgtc tgcaatcgcg cgggatgaca cggccttgtt ggttttcggc ctagcactgg
     7141 ccgtccttct tatggcgcta tgcgctacat acatcatgaa aattctgacc cgctttccat
     7201 ttctgtcttg gttgggcctg ttgttcctaa tctatctgac ttttaaaatg ctgtacgacg
     7261 gttggcccgc ttttgctgag ttgatcatgg tcacgggatc gagctaatgg ttggattcag
     7321 gcctagctgg tcttttcttt gcctatccgt tcccgccgat tcagcatctc atgtagcgca
     7381 tcgagacgct cctggccctc gtccactcgt gaccatagac gcgggataac tgggcgtcgg
     7441 tcaggtcttt cgagaggaag acctcctcag gtgttcgggt atgacggttg acgtgcacag
     7501 cacccacgtc tcctctgggc aaccccgcag agcccggcgc gaccgtctga gtgcttcggc
     7561 ccgttccgct ctttgcgatg gcgtcaaatt ccgttggcga gacggcttcg tccgctccgc
     7621 cagccactct tcggcccaca attcttccgc cgacttatcc atcatggggg taatccttcg
     7681 tgaacggtca ggtcgtatat tttaccctac ggccttgtca tcttccagct tgccggcctc
     7741 gatccgcttg cgccgatcca gcatctcatg tagcgcatcg aggtgtgcct ggccctcgtc
     7801 caccgtttcc
//
LOCUS       DASCNL010000787         1995 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001633027, whole genome shotgun sequence.
ACCESSION   DASCNL010000787 DASCNL010000000
VERSION     DASCNL010000787.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1995)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1995)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1995
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001633027"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="QF359_10400"
     CDS             <1..221
                     /locus_tag="QF359_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HJO87362.1"
                     /translation="IRVECEGEEIRIHARARSFLYHQVRNFAGSLKYVGEGRWTVEEF
                     KVAFETANRNKGGPTAPPEGLYFTEVMY"
     gene            390..1733
                     /locus_tag="QF359_10405"
     CDS             390..1733
                     /locus_tag="QF359_10405"
                     /inference="COORDINATES: protein motif:HMM:NF013132.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HJO87363.1"
                     /translation="MVLVLLLMPPPQGIEPIMMKAGAVIILAIGMWATAIVPSYFGSL
                     IFLFTAVVLAVAPPKVVFSGFHAGAMWLVFGGLVFGLGVKQTGLDTRLVRSLLTHFPK
                     IYIGMIYGVFWVATSLALIVPSASGRVALLVPIMVALAKELGFGEKSKGRTGLILAAS
                     LGTMVPAFNILPANVPNMALYGAADSVLNIQLTYADYFLLNFPVMGVFALVVYPALIA
                     MLFRDTPRHPGHQEKIAAWAGDEKRLLLFLTIALLLWITDSLHGISPAWVALGAAILC
                     LLPRIGMLPPSVLGGEINYGPLLFLAGVIGLGAVANHAGLGAVIAEILIQFFEFQKGA
                     DFQNYASISLTSIVVGLFTTMPAQPSIMVAMTGTLAQATGWSELNVIMASMTAWGVFP
                     FFYQTPPVVVAVALGNLKISDVTKTLICYMILGVLIMLPLHFLWGQSIGMFMTIF"
BASE COUNT          441 a          440 c          520 g          594 t
ORIGIN      
        1 atatccgagt tgagtgcgaa ggcgaggaaa tccgtatcca tgcccgggct cgctcgtttc
       61 tttatcatca ggtgcggaac tttgccggct cattaaaata tgtaggtgaa ggccgctgga
      121 ctgttgagga atttaaagtg gcgttcgaaa ctgccaaccg caacaaaggt ggccctaccg
      181 ctccgcccga aggtctctac ttcactgaag tgatgtatta aaaaattaat cgacagtcga
      241 taaatagctt gttgcggatg atatttttgt tttttctgac atattgcttc accataaagc
      301 gcggcatcaa cggcttacag gaataaacgg gggtcagcat taattttctt agaaacccat
      361 cgtcgatcat ttttggacta ttcaccttca tggtattggt tttgctcctg atgccaccgc
      421 ctcaaggtat cgagccgatt atgatgaaag ccggggcggt gataattttg gcgatcggca
      481 tgtgggcgac ggccattgtg ccgtcctatt ttggctcgct aatatttctt ttcaccgcgg
      541 tggtattggc agtggcccca cccaaagtgg ttttttccgg ctttcacgcc ggtgccatgt
      601 ggctggtatt tggcggtctc gtttttggct taggtgtcaa gcaaaccggt ctcgataccc
      661 gtttggtgcg ctcactgcta acccattttc caaaaatcta tatcggcatg atctatggcg
      721 ttttttgggt cgcaacgtcg ctggccctga tcgtgccctc ggcatcggga cgggtagcgt
      781 tgttggtgcc gattatggtg gcactggcaa aagagcttgg atttggtgag aaaagcaaag
      841 gtcgcaccgg tttaattctg gctgcatcct taggtacgat ggtgccggcg tttaatatct
      901 tgccggccaa tgtgccgaat atggcgctat atggcgcggc ggatagtgtg cttaatattc
      961 aactgaccta tgctgattat tttctgctga attttccggt gatgggtgtt tttgcgctgg
     1021 tggtttatcc ggcgttgatt gcaatgctat tcagagatac gccgcgccat cccggccacc
     1081 aggagaaaat cgcggcttgg gccggtgacg agaaacgtct gcttttgttt ctgactatcg
     1141 ctttgctgct ctggattacc gacagtctgc acggtatttc gccggcttgg gtcgccttag
     1201 gtgcggctat attatgtctg ttaccacgga ttggcatgct accaccgagc gtcttgggcg
     1261 gtgaaatcaa ttacggccca ttgttatttt tggctggcgt gattggtctt ggcgcagttg
     1321 ccaatcatgc tggtttgggt gcggtcattg ccgaaattct tatacaattt tttgaattcc
     1381 aaaaaggggc ggattttcag aactatgcct caatttcgct gactagcatc gtggttggat
     1441 tgtttacgac catgccggca cagccttcca ttatggtcgc gatgaccggg acgctggcgc
     1501 aggccaccgg atggtcagag ctaaatgtca tcatggcgtc gatgacggca tggggggtat
     1561 ttccattttt ctatcaaacg ccgccggttg tcgtcgccgt agcgcttggt aatcttaaga
     1621 tttctgatgt cactaagacg ttgatttgtt atatgatttt aggggtattg attatgctgc
     1681 cactgcattt tttatggggt cagtcgattg gtatgtttat gacaatattt tgatagatta
     1741 attatcggac gcctattgta tcaaaactat gctcagccaa gatcacagca taagaaaaat
     1801 tgaagggact aatccagata acgccattta ggtgttatca tgggggcaat gagaaaaagc
     1861 taattaagca aatccaaaca aggtcgtttg attgagtatt ttttcactgg agccacggcg
     1921 gtcaagcacc cagcgcccca ctttgggaac cctataaatg gctatcaaaa ttcaattccc
     1981 gaccattcgg catat
//
LOCUS       DASCNL010000788         1064 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001635205, whole genome shotgun sequence.
ACCESSION   DASCNL010000788 DASCNL010000000
VERSION     DASCNL010000788.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001635205"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1064
                     /locus_tag="QF359_10410"
     CDS             <1..>1064
                     /locus_tag="QF359_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HJO87364.1"
                     /translation="NLRRAVRKLGQRGIAGICIEDKLFPKTNSFIGEGQPLADIDEFC
                     GKIKAGKDSQLDDDFCVVARVEALISGWGMEEAFNRAVAYHEAGADGILIHSKQQNGA
                     EILDFLKEWAKRSPVLIVPTTYYQTPTEDFTKAGASIIIWANHNIRAATSAMREISRC
                     IQRDQSLSGIEGNIASVKDIFELAENDELAEAEKLYLPASLNKTKAIVLAASRGKELG
                     ELTNDRPKCMVDVRGQPLLRRLASTFNQAQIRNISVVRGYKKSAVNLPGIDFRDNDEF
                     ETTGEVVSLSHAQDQITGNCIFSYGDILFRHYVLDQLLETKGDIVLVADALWQDRDPD
                     PQSRVRDLVKCAEPFTTKYL"
BASE COUNT          265 a          267 c          269 g          263 t
ORIGIN      
        1 acaaccttcg ccgcgccgtc cgcaagttgg gtcagcgtgg cattgctggc atttgcattg
       61 aggacaaact ttttcctaaa actaattctt ttattggcga aggtcagccg ctggctgata
      121 tcgatgagtt ttgtggcaag attaaagctg gtaaagacag ccagttggat gacgattttt
      181 gcgtggtcgc ccgcgtcgag gccctgatct ccggctgggg catggaagaa gcgtttaatc
      241 gggcagtcgc ttatcatgag gctggggcgg acggcatatt gatccactca aagcaacaga
      301 atggcgcaga gattctcgac ttcttaaaag aatgggccaa acgcagcccg gtcttgattg
      361 tgccgacaac ctattatcaa acaccgaccg aggactttac caaggccggt gcttcaatca
      421 ttatttgggc caaccataat atccgggcgg ccacttcggc aatgcgcgaa atctcccgct
      481 gtattcagcg cgaccagtca ctgagcggca ttgaaggtaa tattgcgagc gttaaagata
      541 tttttgaact ggctgagaat gatgagctag cggaagcaga aaaactctac ttacctgcca
      601 gcctcaacaa aaccaaagca attgttttgg ctgcatcgcg tggcaaggaa ttgggcgagc
      661 tgacaaatga cagacccaaa tgcatggtcg atgtacgcgg ccaacccctg ctccgccgcc
      721 tcgcctctac gtttaatcag gctcagatac ggaacatttc ggttgttcgt ggttataaaa
      781 aatcagctgt caatctgcct ggtatcgact tccgcgataa cgatgaattt gaaaccaccg
      841 gtgaagtcgt ttcgctctct cacgcgcagg atcagatcac cggtaactgt attttttcct
      901 atggcgatat tttattccgc cactacgtgt tggaccaact tttggaaacc aagggcgaca
      961 ttgttctggt cgccgatgca ctatggcagg accgtgatcc ggacccgcaa tccagggttc
     1021 gtgatttagt caaatgcgcc gagcccttta cgaccaaata tctc
//
LOCUS       DASCNL010000789         1691 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001641465, whole genome shotgun sequence.
ACCESSION   DASCNL010000789 DASCNL010000000
VERSION     DASCNL010000789.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001641465"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            211..>1691
                     /locus_tag="QF359_10415"
     CDS             211..>1691
                     /locus_tag="QF359_10415"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO87365.1"
                     /translation="MSEKDLTSLRGALDWLREEGDLIETDKEVDPDLEITGLQKHMDG
                     GPPILFENVKGKPHARAVTNLFSDIGIIEKMFNWDGPVDRTKKLARALNHPLAPVEIS
                     QEEAPVQEHVITDDLDVNKWITAIRHTALETELTIGSGISCVIGDYFDGGSHIGYNRM
                     NFRWGDTGTFQISPGSHMWQIMTANYHNDEPIPLTMCFGVPPACTLLAGGGFDYVILP
                     KGCDEIGMAGAVQGNPIRLVKCQTIDALTLADAEYVLEGYLHPRDKRYETKEAEDLKV
                     QGKTFFHPEWAGYMGKAYKAPTFHVTAITMRKPEGKPIIFPLGVHTSDDANIDTTVRE
                     SAIFELCDRLQPGIIQDCHIPYSMTDWGGCIIQVKKRNQIEEGWQRNFLSAILSCSQG
                     MRLAIAVSDDVDIYSMDDIMWNLTTRVNPQTDILNPHPGGIGQTFMPAERMTAGSAAW
                     TASNTKFEGGMGIDATVPYGFEQDFHRPVYPVDRVKMEDFLTD"
BASE COUNT          431 a          409 c          433 g          418 t
ORIGIN      
        1 aatccctgtt ttctgctaaa atttcgtatg gcacgaccat agctatttca aaagaaaaat
       61 cggtacgcat tttagggagg cgatgccaag tgattaatac caactcggat aatacgcgat
      121 gtttgcctga tgatttcaat tggtgcagat tatctcggct gataaccaat tgcctgatca
      181 atctagcctt tagaatttga ggaagaaata atgagtgaaa aagatttaac cagcttgcgt
      241 ggcgccttgg actggctgcg tgaagaaggt gatttaattg agactgataa ggaagttgat
      301 cccgatctag aaatcaccgg cctgcaaaaa cacatggacg gcggtccgcc cattttgttc
      361 gaaaatgtca aaggtaaacc tcatgcccgt gccgtcacca atctgttttc agacatcggc
      421 ataatcgaaa aaatgttcaa ttgggacggc ccggttgatc gcaccaagaa actcgctcgt
      481 gccttgaacc atcctctggc accggttgaa atttcccaag aggaagcacc ggtgcaggaa
      541 cacgtcatta ccgatgatct cgatgtcaat aagtggatca ccgccattcg tcacaccgca
      601 ctagaaaccg agctgaccat tggctctgga atttcctgcg taatcggtga ctatttcgat
      661 ggcggcagtc atatcggcta taaccgtatg aactttcgct ggggcgatac cggtaccttc
      721 caaatctcgc cgggctcgca tatgtggcag atcatgacgg ctaattatca caatgatgag
      781 ccgatcccgc tgaccatgtg ctttggcgtg ccgccggcat gtacgctcct cgcgggtggc
      841 ggttttgact atgtgatcct acccaaaggt tgtgatgaaa tcggcatggc cggggcggtg
      901 cagggcaacc cgatacggct ggttaaatgt cagaccatcg atgcgttgac tttggccgat
      961 gctgagtacg tgctcgaagg ttatctccat ccgcgtgata aacgctatga aaccaaagaa
     1021 gctgaagatt tgaaggttca gggtaaaact ttcttccatc ctgaatgggc cggctatatg
     1081 ggcaaagctt ataaggcgcc gactttccac gtcaccgcga ttaccatgcg gaaaccggaa
     1141 ggaaagccga tcatcttccc actcggtgtt cacacgtcgg atgatgccaa tattgatacg
     1201 acagtgcgtg agtcagcgat tttcgagctg tgtgaccgtc tgcaacccgg catcatccaa
     1261 gattgtcaca ttccttacag catgactgat tggggtggtt gcatcattca ggtgaaaaag
     1321 cgcaaccaaa ttgaagaagg ctggcaacgt aacttcttgt ccgccattct atcgtgctca
     1381 caaggcatgc gcctagctat tgcagtcagt gatgatgtcg atatctattc gatggatgac
     1441 attatgtgga acctgacgac ccgggttaat ccgcaaaccg atatcctcaa cccgcatccg
     1501 ggtggtattg gccagacctt catgccggcg gagcggatga cggctggcag tgcagcctgg
     1561 accgcctcga acaccaagtt cgaaggtggt atgggcattg atgccaccgt accgtatggt
     1621 tttgagcagg acttccatcg cccggtttat ccggttgata gggttaaaat ggaagacttc
     1681 ttgaccgatg a
//
LOCUS       DASCNL010000790         1678 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001644193, whole genome shotgun sequence.
ACCESSION   DASCNL010000790 DASCNL010000000
VERSION     DASCNL010000790.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001644193"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            17..>1678
                     /locus_tag="QF359_10420"
     CDS             17..>1678
                     /locus_tag="QF359_10420"
                     /inference="COORDINATES: protein motif:HMM:TIGR03710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HJO87366.1"
                     /translation="MTTALAGNDLSTFPDFPAEIRAPQGTTFGVSAFQIHFGSREIRT
                     AGDAPDVLVALNPAALKVNLTDLNKGGLIIFDTGTFTDRNLKKAGYEDNPLENGSLDD
                     FRTIAVNITKNTLEAVKDLGLSQKEAVRCKNMYALGLVYWLYGREREPTVHWLNEKFG
                     KRPEIAISNIAAVNAGHAFGETTEASGGTSAYKVAPAKIEPGLYRTITGIKAVAYGLA
                     AGAQKAGLRMTFAGYPITPASGVLHTLSKLKQFDIVTFQAEDEIAAVCAALGGSYAGT
                     LGVTASSGPGIALKTEAIGLAISVELPLVIVNAQRAGPSTGLPTKTEQSDLYQAVYGR
                     NADAPLVVIAARSPADNFDVAIEATRLATKYMTPVMLLTDGYLANASEPWKLPDVDAI
                     PDFPVKFLSDTEGFSPSHRDAKTLARNWPVPGTPGLEHRIGGIEKSYKSGNLSYEAAN
                     HQKMTDVRKAKIDGIAEDIPNQKVTRGDAKGDVVVVGWGSTFGPITRAVQKVQAESHK
                     VSHIHIRYIWPLPKNLGSLLKKFKKVIVAEMNTGQLITVLRSEYLI"
BASE COUNT          424 a          453 c          410 g          391 t
ORIGIN      
        1 cggcagtcaa tttacattga caaccgcgtt agctggtaat gatctttcga catttccgga
       61 ttttccggct gagatcagag cgccgcaagg caccactttc ggggtatcag cttttcaaat
      121 ccattttggc tcacgcgaaa ttagaaccgc tggtgatgca cctgatgtgc tggtcgcgct
      181 taacccggca gctctcaagg tcaaccttac cgatctcaat aagggcgggt taattatttt
      241 tgatactggt accttcacgg accggaattt gaaaaaagcg ggctatgaag ataacccgct
      301 tgaaaatggc agccttgatg acttccggac aatcgccgtc aatattacca aaaacactct
      361 tgaagccgtt aaagatctcg gactttctca aaaagaagcc gtccggtgta aaaacatgta
      421 cgcgctcggt ctggtttact ggctgtatgg ccgggaacgg gaaccgacgg ttcattggct
      481 taatgaaaaa ttcggcaaac ggcccgaaat tgctatctca aacattgcag cagtaaatgc
      541 cggtcatgcc tttggtgaaa ccacggaagc ctcgggtgga acctcggcct ataaagtagc
      601 gccagccaaa attgagcccg gtctctaccg taccatcact ggcatcaaag ccgttgccta
      661 tggtctggct gcgggagctc aaaaagcggg gctaagaatg acttttgccg gctatccaat
      721 taccccagcc tccggcgtct tgcacacact atccaaactt aaacagttcg atatagtaac
      781 cttccaggcc gaagatgaaa tcgccgccgt ttgcgcggcc cttggtggct cttatgccgg
      841 cacgctgggc gtcaccgcaa gttctggccc cggcatcgcg cttaaaaccg aagcaatcgg
      901 tttagctatt tcggtcgaac ttccattggt gatagtcaat gctcaacgcg ccggcccatc
      961 gaccggattg ccgaccaaga ccgaacaatc tgatctctat caagcggttt atggccgcaa
     1021 tgctgatgct ccgctggttg tcatcgccgc caggtcaccc gccgataatt ttgacgtcgc
     1081 cattgaagcc actcgcctgg caaccaaata tatgacaccg gtgatgttgt taaccgatgg
     1141 ctatcttgct aacgcatcgg agccttggaa acttccggat gtcgatgcga tccctgattt
     1201 tccagtcaag ttcctcagcg atacagaagg tttctcgccg tcccaccggg atgctaaaac
     1261 gcttgcccgt aactggccag taccaggaac accggggctg gaacaccgca ttggtggcat
     1321 cgaaaaatct tataaatccg gcaatctttc ctatgaagcc gccaatcacc agaaaatgac
     1381 ggacgtccgt aaggccaaaa ttgatggcat tgccgaagat attccaaatc agaaagtcac
     1441 ccggggcgat gccaagggcg atgtcgtcgt ggttggctgg ggctcgactt ttggccccat
     1501 cacccgggcc gtgcagaagg tccaggctga aagccacaaa gtatcgcaca tccatattcg
     1561 ttacatttgg ccgctaccga aaaatctcgg ctctctgctg aagaaattca aaaaagtgat
     1621 agttgccgaa atgaataccg gccagctgat tactgtcctg cgcagtgaat atctgatc
//
LOCUS       DASCNL010000791         3408 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001645800, whole genome shotgun sequence.
ACCESSION   DASCNL010000791 DASCNL010000000
VERSION     DASCNL010000791.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3408)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3408)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3408
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001645800"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="QF359_10425"
     CDS             <1..204
                     /locus_tag="QF359_10425"
                     /inference="COORDINATES: protein motif:HMM:NF039581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87367.1"
                     /translation="RGNRLVDFDTDGIHETPIHERALLEPGMVLQGPLIIEEPATTIL
                     IPPGAYGEVDNYGNIHIHLEKQD"
     gene            209..1885
                     /locus_tag="QF359_10430"
     CDS             209..1885
                     /locus_tag="QF359_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO87368.1"
                     /translation="MDPFNGEIIKNSFTALSDEMFEAMRRTSKSPIIYEVLDFGVGIT
                     DAKGELLAMGSGIPFLLSSLETLVKGVIEKHSPAGINSGDIFISNDPYHQGAGTHLND
                     CGLVMPVFFEGELVAFTSVNAHWTDVGGMHPGSMTPSARELFQEGFQLPNIRLFRDGE
                     PVQDMFDLIEANVRLPDMSMGDLWASIAALRVGERRLQEVFERYGKGDVLDAMSDLLD
                     YSERMMLHELKSLPKGVFEAKDQIDEDGQGNGPFKIKVKVTITDDQFLVDFTGSAEQA
                     QGPINVSPLALSSAVRCVYHAVTNHSVPANAGTFRPLEYICPEGTVFSARRPAPVSTY
                     YEGMAHAVELVWKALAPHLPDRLTAGHMVSTCVTIISGLHPDTHNFFVYVETLPGGWG
                     AGHDKDGVDGTGCVANGETFNIPVEVKETKFGIRVERYTFNDEQGGGGTFRGGRGMIL
                     DYKITSDFATLTTVFGRHKTPPWGLLGGQDGTCNYAKVIHPDGSEETFGRAAGINLSK
                     GDVVRLVTGAGGGYGEPDKRPSDKVLDDIKNGYLTSDQAAKEYGVELESQ"
     gene            2103..>3408
                     /locus_tag="QF359_10435"
     CDS             2103..>3408
                     /locus_tag="QF359_10435"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HJO87369.1"
                     /translation="MANLDSYTDHDIPSGSAATKKIMDYVPRFSEAEKKRRWDGVREK
                     MKTANLDALVFLGNDTFFDMGLVNVRYLTHIGSKAGTNALFFLDEDPIVWNALPHQQR
                     PTNVHHHTQDWTSDIRPFLGLGDMISELQSRGIDKDRVGLIGFSSSIVTTPTLLHKDV
                     VTLEGALPNLEFVPAGSMMEEMRLIKSEEELAVMTEASRISRLVVDKFIDYPKATMTE
                     AELWAEMIKTMIVNGAEPQVFFFMASGPVEHDGKELWHLLHGAEQPAVPSMRPLEKGD
                     VITAEWHVQYSGYLAATEFTVYLGDKAPQELKDIHKINVECLEASLESMKPGNTLREA
                     WEAIRAPAEKAGLDYVELGFHGHGMASPEFPTVIYRPGYGPPSLNGSGIEDLVFEEGM
                     VFGNNIDLFNPNWKPDVGCMFGDMVVVRGNRAERLVDIPLRLP"
BASE COUNT          846 a          803 c          929 g          830 t
ORIGIN      
        1 aggggcaatc gcctagtcga ttttgatacg gatggtattc acgagacacc catccacgag
       61 cgggcattgt tggagccggg aatggtgctc caaggtcctc taattatcga agagccggca
      121 acgaccatcc ttattccacc gggagcctat ggcgaggtcg ataattacgg caatattcac
      181 attcacttgg aaaaacagga ttaagaccat ggatccgttc aacggagaga ttatcaagaa
      241 ttcattcacc gctttgtccg atgagatgtt cgaggcaatg cggcgaacgt ccaaaagccc
      301 gattatttac gaggtgttgg atttcggcgt cggcatcacc gatgcaaaag gtgaattgct
      361 ggccatggga tcgggtattc cctttctgct gtcatcgctg gaaaccctgg tgaagggcgt
      421 catcgaaaag cacagcccgg cgggcattaa ttcgggcgat atttttattt ccaacgatcc
      481 ttaccaccaa ggcgccggca ctcacctcaa cgattgcggg ctggtaatgc cggtcttttt
      541 tgaaggtgag ctggttgcct tcacttctgt caacgcccac tggaccgatg tgggtggcat
      601 gcatcctggc tcaatgacgc catcggcgcg tgaattgttt caagagggat tccaactgcc
      661 caatatacgg ctgttcaggg atggtgagcc agtccaggat atgttcgacc tgatcgaagc
      721 caatgtgcgc ctgcccgata tgtccatggg tgatctttgg gcatcgatag ccgcgctacg
      781 ggttggcgag cggcgtttac aggaggtgtt tgaacgttac ggaaagggtg atgtactgga
      841 cgccatgagt gatcttttgg actattccga acgcatgatg ttgcatgaac ttaagtcctt
      901 gccaaaaggt gtctttgaag ccaaagacca gatcgacgaa gatggtcagg gcaacggccc
      961 atttaaaata aaagtcaaag tgacaattac tgatgatcag ttcttagtag attttaccgg
     1021 tagtgccgag caggcccagg gacccataaa tgtgagcccg cttgccttaa gctcagcggt
     1081 gcgctgtgtt taccatgcag tgaccaatca ttcggtaccg gccaatgcgg gtacttttcg
     1141 accgctcgaa tatatctgtc ccgaaggtac tgttttttca gccagacgcc cggctccggt
     1201 atctacctat tatgaaggta tggcacatgc ggtggaattg gtatggaagg ctttagcacc
     1261 gcatttacct gaccggttga cggcgggcca tatggtttca acctgcgtta ccataatttc
     1321 cggactgcat cctgacaccc ataatttttt cgtttatgtc gaaaccttgc ctggcggttg
     1381 gggtgctggt cacgacaagg acggggtcga tgggacgggc tgtgtggcca atggcgagac
     1441 gttcaatatc cctgtcgaag tcaaggaaac taaatttggc attcgcgtcg aacgatatac
     1501 ttttaacgat gagcagggcg gtggcggcac cttccggggc ggcaggggga tgatcctgga
     1561 ttataagatt acttctgact tcgctacctt gacgacagtt ttcggacgcc ataagacccc
     1621 accctgggga ttgctgggag gccaggacgg tacctgtaat tacgctaaag ttatacatcc
     1681 cgatggcagc gaagagacct tcggtcgtgc cgccggtatt aatcttagca agggtgatgt
     1741 tgtacgtctc gtaaccggtg ccggcggtgg ttacggtgag cctgataaac ggccttcgga
     1801 taaagtcctg gacgacatta aaaacggcta tttaacatct gaccaggcag caaaggaata
     1861 tggcgtcgaa ttagagagcc agtagtcagg cgaagttggt gttttaaata acatcaaaat
     1921 cgggcaaaag attggggaat ttagtaaacc taaattccgc tcagattggc acggtcaaga
     1981 aaatattccc aagcccaatc catcacaaca tcctttgcta agatatgatc ttccaaattg
     2041 gcagcaacaa atactataat gtgataatct aatcacaaga aacgaaaatt agtgagacga
     2101 tgatggccaa tttagattct tacactgatc acgatatccc ctccggttca gctgctacaa
     2161 aaaaaattat ggattatgtg ccgcgctttt cggaggctga aaaaaaacgc cgctgggatg
     2221 gtgtgcgtga gaagatgaag accgccaatc tggacgcgct ggtgtttctc ggcaacgaca
     2281 ctttcttcga tatggggtta gtcaatgtcc gctacctgac ccatatcggc tccaaggccg
     2341 gaaccaacgc gctgtttttt ctagacgaag acccaatcgt ttggaacgcg ttacctcacc
     2401 agcaacgccc gaccaacgtg caccaccata cccaggactg gacaagtgac atccgtccgt
     2461 ttctcggcct cggcgatatg atatccgaat tgcaaagccg gggtattgat aaggaccggg
     2521 tcggtctgat cggtttttca tcctctatcg ttaccacgcc gaccttgttg cacaaggatg
     2581 tagttactct ggagggggcg ctgcccaact tggaatttgt tcctgctggg tcaatgatgg
     2641 aggaaatgcg cctgattaaa agcgaagaag aacttgccgt tatgactgaa gccagccgta
     2701 tttcgcgcct ggtcgtggac aaatttattg actatcccaa agccactatg accgaggctg
     2761 aattatgggc cgaaatgatc aaaaccatga ttgtcaatgg cgccgagcct caggtgtttt
     2821 tcttcatggc cagcggtccg gtggagcatg atggaaaaga gctctggcat ttgttgcatg
     2881 gtgccgaaca acctgcggtg ccgagtatgc ggccactgga gaaaggtgat gtgataactg
     2941 ccgagtggca tgttcagtat tcgggctatc tggcggcgac ggaatttacc gtctatttgg
     3001 gcgataaagc gccgcaggaa ttgaaggata ttcataaaat taatgtggaa tgtctggaag
     3061 ccagtctcga atccatgaaa ccgggaaata cgctacgcga agcctgggag gcaattcggg
     3121 cgccggcgga aaaagccggc ttggactatg tggagcttgg ctttcacggc catggcatgg
     3181 cgtcgccgga attccccact gtcatttacc ggcccggata cggcccgcca tcactgaacg
     3241 gtagcggaat cgaagatctg gtgttcgaag aaggtatggt ctttggcaac aacattgatc
     3301 tattcaatcc caattggaaa ccggatgttg gatgcatgtt cggagatatg gtggtggtgc
     3361 gcggcaatcg cgccgaacgg ctcgtggaca taccattacg ccttcctg
//
LOCUS       DASCNL010000792         2268 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001647218, whole genome shotgun sequence.
ACCESSION   DASCNL010000792 DASCNL010000000
VERSION     DASCNL010000792.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001647218"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2107)
                     /locus_tag="QF359_10440"
     CDS             complement(<1..2107)
                     /locus_tag="QF359_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87370.1"
                     /translation="MIKINANRPDAWWRRIYLHTLLYFVYLTLVCLKILSRDFAKRIA
                     EKDFTAQIKIESTGMGRMIIFNDGQLRSRSGMTDNADVSLEFSDCFTAARLLTPPINY
                     QRQIDAQKNFQLKLLGPDELTYHFTQIMIAMRRIGWEYGTKLENDVIRYTTNTNGGPL
                     FVHVKDEKIIRVTPIDLDSSDAPSWTIKARGKSFTPPRKATVSPHALAWKSLVYSPDR
                     IMTPLKRVDFDVNGDRNCQNRGVSGYEPISWDEALDIVAGEIKRLKRDVGPGAIAYSH
                     GSHHTFGNIGYQLSAFRRFANAIGMTEVHPNPDSWEGWYWGAMHHYGHSMRCGGPENY
                     GTAEDCLENCEMVVFWSSDPESTNGIYAGYEGTVRRKWLKELDIDFVHINPHYCETAA
                     YMGGKWIAPKPTTSPALGLAIAYTWITEGTFDEDYVSEKTLGFDKWKDYILGQEDSIP
                     KTPEWAAEETGVPAKDILALAQKWAAKKTYLAAGGGNGHGGACRNATGTQWARISVCL
                     MAMQGMGKPGVNYGFMQWGAPVNLRFYFPGYAEGGIAGDLFHTALSVHLYQRMPQLPA
                     VNTVTQRIPKLSLPEAIMDGTAEGHPWIATTIEGQFTRFKYPAPGFAPVEMLYKYGGS
                     IIGTANDSNRYIRMYQSDKLSFVVNQAIWMEGETKFADVILPACTSMERWDISEWAGT
                     HGYTQDSQSQLNHRVVVLQH"
BASE COUNT          547 a          567 c          555 g          599 t
ORIGIN      
        1 tatgttgcaa aaccacgacc cggtgattca actgcgactg ggaatcctgg gtataaccat
       61 gagttccagc ccattcactg atatcccagc gctccatact ggtgcaggcc ggtaaaatca
      121 catcggcgaa ctttgtctcg ccttccatcc aaatagcttg gttgacgaca aaggataatt
      181 tgtccgattg atacatgcgg atatatcgat tgctgtcatt ggctgtgcca atgatggacc
      241 caccgtattt gtacagcatt tccaccggcg cgaaaccggg cgccgggtat ttgaagcggg
      301 taaactgtcc ttcaattgtt gtcgcgatcc aaggatgacc ttccgctgta ccatccatta
      361 ttgcttccgg cagggacagt ttcggaatcc tttgcgtaac tgtattgacg gccggcagtt
      421 gaggcatgcg ctggtagaga tggacagaaa gagcggtatg aaatagatct ccggcaattc
      481 caccttcggc gtaaccgggg aaatagaacc ttagatttac cggtgcaccc cattgcatga
      541 agccataatt gacgcctggc ttacccattc cctgcatcgc catcaagcag acggatatac
      601 gcgcccattg agttccggtc gcattccggc aagcgccgcc atgcccatta ccgccacctg
      661 cggcaaggta agttttcttt gccgcccact tttgcgccaa ggctaggatg tctttggccg
      721 ggacaccagt ttcttcagct gcccattccg gtgttttcgg aatactgtct tcttgaccta
      781 ggatgtagtc tttccatttg tcaaatccca aagttttttc gctgacgtaa tcctcgtcaa
      841 aggtaccttc cgtaatccag gtataggcga tcgccagtcc cagagccggc gaggttgtcg
      901 gcttgggcgc gatccatttt ccgcccatat aagcggcggt ttcgcaatag tggggattaa
      961 tatgaacaaa atcgatgtct agttctttga gccattttcg ccgcaccgtg ccttcatacc
     1021 cagcgtaaat tccattggtg gattccggat ctgaggacca gaagacaacc atctcacagt
     1081 tttccagaca atcttctgcg gtgccataat tttcaggccc gccacatcgc atgctatggc
     1141 catagtgatg catggctccc caataccagc cttcccagct atcggggttg ggatgaactt
     1201 cggtcatgcc aatggcgttg gcgaagcgac gaaaagcgct tagctggtaa ccgatattac
     1261 caaaagtatg atgggaacca tggctatagg cgattgcgcc cggcccaacg tcgcgtttga
     1321 gacgtttaat ctcacccgcg acgatgtcca aagcttcgtc ccagctaatc ggctcgtatc
     1381 ccgatacgcc gcgattttgg caattacgat ctccattcac atcgaaatcg acccgcttaa
     1441 gtggggtcat tatccgatcc ggtgagtaga cgagagattt ccacgccagc gcgtgcgggc
     1501 ttacggtggc tttgcgtggc ggcgtaaaag atttgccacg agccttgatg gtccaggatg
     1561 gcgcatccga agaatcgaga tcaatcggcg taacgcgaat tattttctcg tctttaacat
     1621 ggacaaagag cggtccacca ttggtattgg tggtgtaacg gataacatca ttttcaagct
     1681 tggtgccata ttcccagcca atacgccgca tggcgatcat gatctgggta aaatgatagg
     1741 taagttcatc cggaccaagt aatttaagct gaaagttttt ctgtgcgtca atttggcgct
     1801 ggtaattaat cggcggtgtc agaagtcggg cggcagtaaa acaatctgaa aattcaagtg
     1861 acacatcggc attgtcggtc attccggacc ttgaccgtaa ttggccatca ttgaaaatga
     1921 tcatccgccc catgccggtg gattcaattt taatctgcgc agtaaagtct ttttcggcga
     1981 tccgtttggc gaaatctctg cttagaattt tcaggcaaac cagagtcaaa tagacaaaat
     2041 acaacagcgt gtgaaggtat atccgtcgcc accaagcatc tggacgattt gcgtttattt
     2101 taatcattat tatattttcc gcatttttac gtttgaagga ttggcgtcac agatcgttga
     2161 gatcaagggc cggggatgtc cggtgcacga caagtagtct gcacgcaatt gaccacacat
     2221 gatgaagaga atgtttttgg ctttagacat tttggaaatt taatcctt
//
LOCUS       DASCNL010000793         1455 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001649491, whole genome shotgun sequence.
ACCESSION   DASCNL010000793 DASCNL010000000
VERSION     DASCNL010000793.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1455)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1455)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001649491"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="QF359_10445"
     CDS             complement(<1..195)
                     /locus_tag="QF359_10445"
                     /inference="COORDINATES: protein motif:HMM:NF014390.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HJO87371.1"
                     /translation="MPQFDVTTFLPQIIWLVISYLVLYFLMAKVALPKIGGILEERQA
                     RIDDNLDAAQSLRNESNAEAE"
     gene            complement(246..470)
                     /locus_tag="QF359_10450"
     CDS             complement(246..470)
                     /locus_tag="QF359_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HJO87372.1"
                     /translation="MDADAAKLVGAGLATLGFIGPGIGIGLIWAALINTVGRNPGAAD
                     AVTTTAWVSFALVEALAIFALVIGLIILFG"
     gene            complement(525..1256)
                     /locus_tag="QF359_10455"
     CDS             complement(525..1256)
                     /locus_tag="QF359_10455"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HJO87373.1"
                     /translation="MAESHSPMEQFEIKTWIPIQIGDFNASFTNSSAFMILAVIAATA
                     LMVFAVRPRAGVPGRWQLLAELCYQFIAKMVSDNIGKEGRPYFPFIFTIFVFVLFGNF
                     IGMLPYSFTFTSHIAVTLTMALVIFVLVTVIAFIKHGFHFFSFFLPAGVPIVLSPLMI
                     AIEVISYFTRPLSLSIRLFANMMAGHTLLKVVGGFVVPLGIFGVVPVAGLVAVTGLEF
                     LIAFLQAYIFTILTCIYINDAINLH"
     gene            complement(1259..>1455)
                     /locus_tag="QF359_10460"
     CDS             complement(1259..>1455)
                     /locus_tag="QF359_10460"
                     /inference="COORDINATES: protein motif:HMM:NF021073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HJO87374.1"
                     /translation="GIGFVIDTWLETKPWFLVGFLLLGNTAGLWNIYRISNSQGYTVG
                     FGRGNRSENHETNRDNTKGD"
BASE COUNT          468 a          338 c          316 g          333 t
ORIGIN      
        1 ttcagcttca gcattagatt catttcggag gctttgggca gcatcaaggt tgtcatcgat
       61 cctcgcctgg cgctcttcca aaatgccgcc gatcttcggc aaagcgactt tggccatcag
      121 aaagtagaga accaggtacg aaataacgag ccagattatc tgcggcaaaa acgttgtgac
      181 atcaaattgt ggcatgattt tttgcctatt ggtttaaata cttacaaagt atcgaattgg
      241 ctatcttacc caaaaaggat aatcaggccg ataaccaaag caaaaatagc caaagcctca
      301 accaaggcaa atgacaccca cgcagtggtg gtaacggcat ctgctgcacc tgggttgcgg
      361 cccacggtgt tgattaatgc agcccaaata agtccgatac caataccagg gccgataaag
      421 cccagtgttg ccaaaccagc gcctacgagc tttgctgcat ctgcgtccat tttaaatttt
      481 cctttcgtta gtctcgaaca aagaatgttc aaattagtaa ataattaatg cagattaatt
      541 gcatcgttga tgtaaatgca ggtcaaaatc gtgaaaatat aagcctgcaa aaatgcgata
      601 agaaattcca gcccggtgac ggcaaccaat ccagcgaccg gcaccacgcc aaatattcca
      661 agaggaacaa caaacccgcc aacgactttc agtaatgtat ggcccgccat catattggcg
      721 aacaaccgga tgctgagact taaggggcgg gtgaaataag agataacttc aatggcgatc
      781 atcagcggtg ataaaacaat tggtacgcct gccggtaaga aaaatgagaa aaaatgaaaa
      841 ccatgtttga taaaggcaat tacagtgacc aggacaaata tcaccagcgc catggtcaga
      901 gtaactgcga tgtggctggt gaaggtaaaa ctgtagggca gcatgccaat gaaattaccg
      961 aataatacaa aaacaaaaat ggtaaaaata aacggaaaat aagggcggcc ttccttgccg
     1021 atattgtcgc tcaccatctt ggcaataaat tggtagcaca actctgccaa caactgccat
     1081 cttccgggga caccggcgcg cgggcgaacg gcgaaaacca ttaaggcagt tgctgcgatc
     1141 acggcgagaa tcatgaaggc cgaggaattc gtaaaggacg cattgaaatc accgatttgg
     1201 atcggaatcc aagtcttaat ttcaaattgt tccatcggac tgtgtgattc agccatattt
     1261 aatcgccttt tgtattatct cgatttgttt catggttctc ggaccgattg ccacgaccaa
     1321 atccaactgt atagccctgg ctgttggaaa tccggtaaat attccacaaa ccagcagtat
     1381 ttcctaataa tagaaacccg accaaaaacc acggtttggt ctccagccag gtatcaataa
     1441 caaacccaat accac
//
LOCUS       DASCNL010000794         1650 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001653436, whole genome shotgun sequence.
ACCESSION   DASCNL010000794 DASCNL010000000
VERSION     DASCNL010000794.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001653436"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            103..1425
                     /gene="aroA"
                     /locus_tag="QF359_10465"
     CDS             103..1425
                     /gene="aroA"
                     /locus_tag="QF359_10465"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HJO87375.1"
                     /translation="MTSILSHSAAALTGTITVPGDKSISHRALMIGALAVGETTISCL
                     LEGEDVLATAAAVQQLGAGIEQQDNIWRVYGRGIGGLIEPSSVLDLGNSGTAARLLMG
                     VLSSHELSATLTGDDSLSSRPMERVMAPLREIGAEFVARTGGKLPITITGTGTALPGE
                     ETLKVASAQVKSAILLAGLNAQGNTIVIEPNPSRDHTEKMLNFFGADISVKKMADGAR
                     KITLIGQPEITGQKIEVPGDISSAAFPLVAALITLGSDLTIENVGINLLRVGVLESLR
                     DMGAEIDIFNKRDTAGEPMADIHVRASNLTGATVPASRAPSMIDEYPILAIAAACAEG
                     TSVFEGISELRVKESDRLAAMAFGLKDCGVDTETTGDTLTIHGTGSAPKGGVTISSRL
                     DHRIAMSYLVLGMVSQEPVTVDDGGPIETSFPGFIQLMNGIGAKMDEC"
     gene            1428..>1650
                     /locus_tag="QF359_10470"
     CDS             1428..>1650
                     /locus_tag="QF359_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HJO87376.1"
                     /translation="MIIAVDGPAAAGKGTLTRKLAEHFNLARLDTGMIYRAVGLKALK
                     IGDPADEKIAVEAAQLLSFDDLDQQGLRDE"
BASE COUNT          383 a          434 c          473 g          360 t
ORIGIN      
        1 cgcctaaact ccaaatatta ttgtggcccc cctacccctg gccggtcaaa agtgctagag
       61 accacagaat atggtcccaa aatcaatgac taaggacgaa ttttgacttc catcctctca
      121 cattcggcgg ccgctttaac tggcacgatc accgtaccgg gggataaatc tatctctcac
      181 cgggcgctga tgattggtgc tttggcggtg ggcgaaacca ccatttcttg cctgcttgag
      241 ggcgaagacg tcctggcgac cgcggcggcg gtgcagcaat tgggcgccgg gatcgagcaa
      301 caagataata tatggcgggt ttatggccgg ggtatcgggg gtttgataga gccttcatcg
      361 gtgcttgatc tcggaaattc tggcacggca gcaaggctgc tgatgggcgt tctgtcaagc
      421 catgaacttt cggcaacctt gaccggtgac gactcactga gctcccggcc gatggagcgc
      481 gtgatggcac cactgcgtga gatcggcgct gagtttgtgg ccaggaccgg cggcaaacta
      541 ccgatcacca ttaccggtac cgggacggca ttacccggtg aagaaactct caaagtcgcc
      601 tcggcgcagg taaagtcagc gatattgctg gccggcctca atgctcaagg caacaccatt
      661 gtcattgagc caaatccaag ccgcgatcac accgaaaaaa tgctgaactt ttttggcgcc
      721 gatatctcgg tcaaaaaaat ggctgatggt gcgcgtaaaa taactttgat cggccagcct
      781 gaaattaccg ggcaaaaaat tgaggtgccg ggtgatatat cgtcggccgc ctttccgcta
      841 gttgcggcgc tgattacgct gggctcagac ctcacaatcg aaaatgtcgg cattaacctg
      901 cttcgggtcg gcgtgctgga gagcctccgg gacatgggag cggaaatcga tatatttaat
      961 aagcgagata ccgccggcga gccgatggcc gatattcatg tccgcgctag caacctgaca
     1021 ggcgcaaccg ttccggccag ccgcgcccca agcatgatcg atgaataccc cattcttgcc
     1081 attgctgctg cctgcgccga gggtaccagc gtttttgaag gcatcagtga attacgggtc
     1141 aaagaatctg accgtctggc agcgatggcc ttcggtctca aggattgtgg cgttgatact
     1201 gaaacaaccg gggataccct gaccatccat ggcacgggga gtgcgccaaa agggggtgtt
     1261 accatctcca gccgcctcga tcaccgcatt gccatgtcct atctggtgtt gggcatggtg
     1321 agccaagaac cggttaccgt cgatgacggc gggccgattg aaaccagctt cccgggcttt
     1381 attcaactga tgaacgggat cggcgctaaa atggatgaat gttaagaatg ataattgctg
     1441 ttgatggtcc ggcggcagcc ggtaagggca cccttacccg gaaattggcc gaacatttca
     1501 atttggcgcg gctcgatacc ggcatgattt atcgtgcggt cggcctcaaa gcgctcaaaa
     1561 ttggcgatcc ggcggatgaa aaaatcgctg tcgaagcggc gcaattattg tctttcgacg
     1621 atttggatca acagggcttg cgcgacgaag
//
LOCUS       DASCNL010000795         2074 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001653645, whole genome shotgun sequence.
ACCESSION   DASCNL010000795 DASCNL010000000
VERSION     DASCNL010000795.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001653645"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            150..1259
                     /locus_tag="QF359_10475"
     CDS             150..1259
                     /locus_tag="QF359_10475"
                     /EC_number="2.1.1.195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-5B (C(1))-methyltransferase"
                     /protein_id="HJO87377.1"
                     /translation="MTNNDDTTNTDGRELRRGWTTGTCATAAAKAAYIGLLIGEIPSE
                     IEIVLPGGQKPVFQVIDAKINGDSAMAAIEKDAGDDPDITHGAIIRVWVRKGEGVGFK
                     AGSGVGTITKPGLPLEVGEPAINPAPRQMITDNLQNAADCEGVELAAEIEISVDDGEA
                     LAANTWNPRLGILGGLSILGTTGIVIPYSCSAWIASIQLGIDVARATNIDHVAACTGK
                     ISEKAVTRLYGFEPSAILDMGDFAGGTLKYLRSHPIPKVSIASGFGKLSKLAAGHMDL
                     HSKRSQVDPAFLAKLAGEDGIAPEICDEIANKTSAGQIMEIMARNNLTLGDYVAHAAQ
                     AIALKEAHDSADIEVLAYDRSGTLIGRAPFTGRLT"
     gene            1256..1993
                     /locus_tag="QF359_10480"
     CDS             1256..1993
                     /locus_tag="QF359_10480"
                     /EC_number="1.3.1.106"
                     /inference="COORDINATES: protein motif:HMM:NF005968.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016994 - precorrin-6A reductase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-6A reductase"
                     /protein_id="HJO87378.1"
                     /translation="MKRLLILGGTGDATKLAREASTLPDLEVVYSLAGRTSKPNLPDC
                     MIRISGFGGVEGLVSYLRETEIDLVVDATHPFAAIMADHAGKACNENNIPRLKYCRPA
                     WAQDVVSWISVTDYKTAAEQLQDLGERVFLSIGTKDLEAFTKHAGIWFLVRAVEQPST
                     PIPLENFELLLERGPFDETHEKTLLVSSQIDVLVSKNSGGKMAPKLTAAQALGIPIIM
                     IEQPIPPTGEVVDSVGDVLEWIEECNY"
BASE COUNT          501 a          530 c          574 g          469 t
ORIGIN      
        1 caggcccgga tcaccgggac cagcgccgac gatccacacc gtacccggtt caaattccgg
       61 aagatcaatt gaaaggtttt ccatagccgc ggaatttagc agaatggggc atggatgaaa
      121 aagcgttaat aaggtaatac gttcatttca tgacaaataa tgatgacacg acgaatactg
      181 acggacggga gcttcggcgc ggctggacga caggcacctg cgcgacggct gcagcaaagg
      241 ctgcctatat cggtttgctc attggtgaaa taccaagtga gatcgaaata gtattacccg
      301 gcggccaaaa accagtgttt caagtaatcg acgccaaaat caacggtgac agcgccatgg
      361 cggcaataga gaaagatgcc ggtgatgatc cggacatcac ccatggcgcg attatccggg
      421 tgtgggttcg aaaaggtgag ggtgttggct ttaaagctgg ttcaggggtc ggcacgataa
      481 ccaagccggg cttgccgctg gaggttggtg agcccgccat caatcccgca ccccgtcaaa
      541 tgatcaccga taatttgcaa aatgcagcag attgtgaagg tgtcgagctt gcagcggaaa
      601 ttgaaatctc ggtcgacgat ggtgaggccc tggcagcaaa cacttggaac ccacggcttg
      661 gtattctggg tggactgtcg atcctcggca ccaccgggat tgttatcccg tattcctgct
      721 cggcttggat cgcctcaatc cagctaggta ttgatgtcgc gcgcgccacc aatatcgatc
      781 acgtggccgc ctgtaccggc aaaatttccg agaaagcggt gaccaggctt tatggttttg
      841 agcccagtgc catcttggat atgggtgact ttgctggcgg cacgcttaaa tatctgcgca
      901 gccatccgat cccgaaagtc tccattgcca gcggctttgg caagctttcc aaactcgccg
      961 ccgggcacat ggatttgcat tcaaagcgct cgcaggtcga cccagcgttt ctggctaaac
     1021 tcgctggtga agatggtatc gcgccggaga tttgcgatga gatcgccaat aaaacatcag
     1081 ccggccaaat tatggagatt atggcgcgca ataatttgac cctcggtgat tacgttgccc
     1141 atgccgccca agccatcgcc ttaaaagaag cgcacgatag tgccgatatt gaagtactgg
     1201 cctatgaccg tagtggcaca ttgatcgggc gggcaccgtt tacgggaagg ttgacgtgaa
     1261 gcggcttctc atcttaggcg gcaccggtga tgcgacgaag ctggcacggg aagccagcac
     1321 cttgcctgat cttgaagttg tttattctct ggcaggccgc accagcaaac ccaatctgcc
     1381 ggactgcatg attcgtatca gcggctttgg cggggtcgag ggtctggttt cttatttgcg
     1441 cgagaccgag atcgatctgg ttgtcgatgc gacccatccc ttcgcagcaa tcatggctga
     1501 tcatgccggt aaagcctgca atgaaaacaa tattccgcgt cttaagtatt gccgtccggc
     1561 ctgggcccaa gatgttgtta gttggatctc cgtgacggat tacaagactg ctgccgagca
     1621 acttcaagat ttgggcgagc gcgtcttcct ctctatcggt actaaagatt tggaggcgtt
     1681 caccaagcat gccggcatat ggtttctggt ccgcgccgtc gaacaaccct caacaccgat
     1741 cccgctcgaa aattttgaac tgctgctcga acgtggccca tttgatgaaa cgcatgaaaa
     1801 aacgctgctg gtcagctccc aaatcgacgt actggtgtca aaaaatagcg gtggcaaaat
     1861 ggcccctaaa ctcactgccg cgcaggcctt aggcattccc attatcatga tcgaacaacc
     1921 tattccgcca acgggggaag tggtggatag tgttggggac gtactcgaat ggattgaaga
     1981 gtgtaattat taaattcgcg gcacgcgcga ggatcaatag acttttcagc cgagcggcat
     2041 accgttgcct ttggtcagct tagactgata ggca
//
LOCUS       DASCNL010000796         4510 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001659717, whole genome shotgun sequence.
ACCESSION   DASCNL010000796 DASCNL010000000
VERSION     DASCNL010000796.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4510)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4510)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4510
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001659717"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..981
                     /gene="trpB"
                     /locus_tag="QF359_10485"
     CDS             <1..981
                     /gene="trpB"
                     /locus_tag="QF359_10485"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HJO87379.1"
                     /translation="GGAKIYFKREDLNHTGAHKVNNCLGQILLARKMGKNRVIAETGA
                     GMHGVATATVCALFDIPCTIYMGTTDIDRQAPNVSRMEMLGAKIIPVTSGTGTLKDAM
                     NDALRDWVANVESTYYLIGTVAGPHPYPAMVRDFQSIIGEETRAQIMEQEGRLPDSLI
                     ACIGGGSNALGLFYPFLDDEVRIIAVEASGEGIETGKHAASLNAGAPGVLHGNRTFLL
                     QNDDGQIIDAHSISAGLDYPGIGPEHAWLHDIGRAEYVSITDQEAVEAFQTCTRLEGI
                     LPALESAHAIAHTIKIAGDLLDDHIMVLNMSGRGDKDMDSVVAYLESSKS"
     gene            981..1805
                     /gene="trpA"
                     /locus_tag="QF359_10490"
     CDS             981..1805
                     /gene="trpA"
                     /locus_tag="QF359_10490"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HJO87380.1"
                     /translation="MGSARIAKRFQDLKADGRAGLVTFITAGDPNIEISSVILNQLPE
                     AGADIIELGMPFSDPMADGPVIQASSQRALDNGASMIKTLDMVRNFRKNDSDTPIILM
                     GYFNPIYIYGVAKFVTDATEAGADGFIIVDLPPEEAEMREPVEQAGLSFIYLTSPTTD
                     DQRLTVVVEHASGFVYYVSVTGITGTKSAATQDIKNALERLRRHTDLPIVVGFGIKTP
                     EQAAAISQHAEAVVVGSAFVSKVAENLGPDGRPQDGCAEAVLNLVRDIAGGLSAKN"
     gene            1818..3074
                     /locus_tag="QF359_10495"
     CDS             1818..3074
                     /locus_tag="QF359_10495"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="folylpolyglutamate synthase/dihydrofolate
                     synthase family protein"
                     /protein_id="HJO87381.1"
                     /translation="MDLVQRLKVIDLSLERIERLLGELGNPQDSLPPVIHIAGTNGKG
                     STLAFIRAIAEVAGLRVHVYTSPHLVTFNERIRLCGKPISDAALLALNDEVEAINGTA
                     PITFFEITTAIALLAFSREPADLVLLETGLGGRLDATNVITRPAVTALSPISQDHAGF
                     LGDDLAGIAVEKAAIMKPGIACVTTKQDKVVLDVIRRFAASVDAPLIVEDEDWWIAIK
                     GDQLTVMTPEGEIKPPLPALPGPHQLQNAGLAIVTLATLGDARITREAVAEGMTSVDW
                     PARMQQLTSGPLIDQLPNNCELWLDGGHNPAAGEALAATVRSFDDKPLYLITGLINSK
                     DPGGFLAPLKNQTSALWAVEIADEEASLNAKELTDTAQDVGFNAVAASSISDAISQIV
                     AKTNSPARILICGSLYLAGKVLKDHR"
     gene            3090..4022
                     /locus_tag="QF359_10500"
     CDS             3090..4022
                     /locus_tag="QF359_10500"
                     /inference="COORDINATES: protein motif:HMM:NF014841.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase A"
                     /protein_id="HJO87382.1"
                     /translation="MALLMFNSLRGNIEDWAPFFKDAYPDLEIREWPEIGDPDDIEYL
                     VIGRPSLQELPPLPNLKLMLTMLAGVEGIYNNPACPEGIPLVKGEPETGDPSMTEYAV
                     THVLRHHRNQPAYQEQQRQHNWQPLPQKRPQDQRVGMMGYGTMSKPIVDVLLSLNFDV
                     AAWARTPKPVAPIEVFTGPDNFDAFLARSDIAICLLPFTPETKGIINAEVIAKLPEGA
                     AIINLGRGGHIVTDDLVSALDSGHLSAATLDATEPEPLPKDSPLWDHPQITIMPHCAR
                     RPRVSQIAPQFVENIHRFEAGEPLLQLTSKELGY"
     gene            complement(4338..>4510)
                     /locus_tag="QF359_10505"
     CDS             complement(4338..>4510)
                     /locus_tag="QF359_10505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HJO87383.1"
                     /translation="RLTIAKVNIDDNPQTPSKYGVRGIPTLILFKDGEVAATKVGALP
                     KSKLKEWVESVI"
BASE COUNT         1066 a         1171 c         1180 g         1093 t
ORIGIN      
        1 ggtggcgcaa aaatttactt taagcgcgag gatcttaacc acaccggtgc gcataaggta
       61 aacaattgcc tgggccagat tttactggcc cgcaagatgg gcaaaaaccg ggtgatcgcc
      121 gagactggtg ccggtatgca tggtgtagca accgccaccg tctgcgcctt gtttgatatt
      181 ccttgcacaa tttatatggg caccaccgat attgaccgcc aagcacccaa tgtgtcccgc
      241 atggaaatgc tgggggctaa aattattcca gtgacctccg gtaccggcac tttgaaggac
      301 gccatgaatg atgcgctcag agattgggtt gccaatgtcg aatccaccta ttatctgatc
      361 ggtacagtgg ccggaccgca cccctaccca gcgatggtgc gggattttca atccatcatc
      421 ggtgaagaaa cccgggcgca aattatggaa caagaaggcc gcctgccgga tagtctcatc
      481 gcctgcatcg gcggcggctc caatgcactg ggcttgtttt atcccttcct tgatgacgaa
      541 gtgcggatta ttgccgttga agcctctggt gaaggcattg agaccggcaa acatgcagcg
      601 tcgctaaacg ccggtgcgcc gggtgttctg catggcaatc gcacgtttct tttgcagaat
      661 gatgacggcc agatcatcga tgctcattcg atttccgccg ggcttgatta tccaggtatt
      721 gggccagagc atgcttggct gcacgacatt ggccgcgctg aatatgtttc gatcactgac
      781 caggaagctg ttgaagcatt ccagacctgc acccggcttg aaggcattct cccggcgttg
      841 gaatccgcgc acgccatcgc ccacaccatc aagatcgccg gtgatctgct agatgatcac
      901 atcatggtgc ttaatatgag cgggcgtggt gataaggaca tggattcagt cgttgcttat
      961 ctcgaaagca gcaagtcgtg atcggtagtg cccgcattgc caaacgcttt caagacctca
     1021 aagctgacgg tcgcgccggt ctagtcacgt ttatcaccgc cggtgatccg aatatcgaaa
     1081 tttcaagcgt gatcttaaat cagctgcctg aggccggcgc cgacatcatc gagcttggca
     1141 tgccgttttc cgatccaatg gcagacggtc cggtgatcca agcctcgagc cagcgcgcac
     1201 tggataacgg cgcctcgatg atcaagactc tcgatatggt gcggaacttt cgcaaaaatg
     1261 atagcgacac gccgatcatc ctgatgggct attttaatcc gatttatatt tatggcgttg
     1321 cgaagttcgt cacggacgcc accgaggccg gagccgatgg ttttatcatc gttgatctgc
     1381 cgccggaaga agctgaaatg cgggagcccg ttgagcaagc gggtcttagt tttatttatc
     1441 tgacgtcacc aactaccgat gatcagcgcc tgaccgttgt tgtcgagcat gccagcggct
     1501 ttgtctatta tgtctcggtc accggcatca ccggtaccaa atcagccgcg acccaggata
     1561 ttaaaaatgc gctggaacgc ttgcggcggc acacggattt gccgatcgtg gttggctttg
     1621 gcattaaaac accggagcaa gcggctgcca tcagtcaaca tgctgaggcg gttgttgtcg
     1681 gctcggcctt cgtcagcaaa gtcgctgaga atttaggccc ggatggccgc ccccaagatg
     1741 gctgcgctga ggccgttctt aatctggtcc gcgacatcgc cggtggatta tcggctaaga
     1801 actagaatgt gagagatatg gacctcgtcc agcgcctcaa agtcatcgat ctgtcgctcg
     1861 aacgcatcga acgcctactg ggcgagcttg gcaatccgca agatagtctg ccgccggtga
     1921 ttcatatcgc gggcaccaat ggcaaaggct caacgctggc ttttatacgc gccattgccg
     1981 aggttgcggg cttgcgcgta catgtctaca cctcaccgca tctggtaact ttcaacgaac
     2041 gcattcgcct ctgtggcaag cctatcagcg atgctgcctt gcttgctttg aacgatgaag
     2101 ttgaagccat taatggcaca gcacccatca ctttttttga aatcaccaca gcgattgcgt
     2161 tgctggcctt ttcgagagaa ccggctgatc tcgttttact cgaaaccggt ttgggcgggc
     2221 gcttggatgc gaccaatgtc atcacccggc cggccgtaac ggcgctctcg ccgatcagtc
     2281 aggatcatgc gggtttcctc ggcgatgatc tcgctggtat cgcggttgag aaggccgcca
     2341 tcatgaagcc aggtattgct tgcgtcacca ccaagcagga taaagtcgtg ctggatgtta
     2401 tacggcgctt cgctgccagc gtcgatgcgc cgttgattgt tgaggatgaa gattggtgga
     2461 ttgcgattaa aggcgatcag ctgacagtga tgacgccgga aggtgagatc aagccgccac
     2521 tacccgccct gcctggaccc catcaactgc aaaatgcggg attagcgatt gtcacgctag
     2581 caactctcgg agatgcgcgc attacccgtg aggccgtggc tgaaggcatg acaagtgtag
     2641 actggccggc caggatgcag cagctcacat ccggcccctt gattgatcaa ctgcccaata
     2701 attgcgagct gtggctcgat ggcggccata acccggctgc cggtgaagcg ctggcggcaa
     2761 cggttagaag ttttgacgac aagccgcttt atctcatcac tggcttgatc aacagcaagg
     2821 atccaggcgg tttcttagcg ccgcttaaaa atcaaacaag cgctctgtgg gcggtggaga
     2881 tcgccgatga agaagcaagc ttaaacgcca aagagctgac tgatacagct caagatgttg
     2941 gctttaacgc agtggctgct tcatcgatta gtgacgcaat atcgcagatc gttgcaaaaa
     3001 caaactcacc cgcgcgcata ttgatttgcg gctcgctcta tttggcaggt aaagttctta
     3061 aagatcatcg ttagggagag aataattcta tggcactttt aatgtttaac agtttgcgcg
     3121 gcaatatcga agattgggcg cctttcttta aagatgccta tcctgatttg gaaattcgtg
     3181 aatggcctga gatcggtgat cctgatgaca ttgaatatct ggtaattggc cgcccgagcc
     3241 tgcaagagct accgcccctg cccaacctta aactgatgct gaccatgctg gcgggggttg
     3301 aaggtattta caataatcca gcctgtcccg aaggcattcc actggtcaaa ggtgagcccg
     3361 aaacaggtga tccgtcgatg accgaatatg ccgtgaccca tgtgttgcgt catcaccgca
     3421 atcaaccggc ttatcaagag caacaacgcc agcacaattg gcagcctctg ccgcaaaagc
     3481 gcccgcaaga tcagcgggtc ggtatgatgg gttatggcac catgtcgaaa cccatcgttg
     3541 atgttttatt gagcttaaac tttgatgttg ccgcctgggc gcggacacca aaacctgtgg
     3601 cacccattga agtgttcacc gggccggaca attttgatgc ctttctcgcc cgctccgata
     3661 tcgcgatttg cctgctgccc ttcacgcccg agaccaaggg aattatcaac gccgaggtaa
     3721 tcgctaaact acctgaaggt gcagcaataa ttaatcttgg ccgcggcggt catattgtca
     3781 ccgatgatct ggtatcagcc cttgatagcg ggcatttatc ggcggccacc ttggatgcga
     3841 ccgagccgga acccttaccc aaagacagcc cgctttggga ccaccctcaa atcactatca
     3901 tgccccattg cgcccgccgc ccgcgggtga gccagattgc gccgcaattt gtcgaaaaca
     3961 tccaccgctt cgaagcgggt gaaccattgt tgcaactgac gagtaaagaa ttgggatatt
     4021 agaggtatta cttatttggg tgcttgggtt tgtgtgaaca aaagtattta ataataccaa
     4081 tatccaaatc cagcaggaag tgcagttaga tatctgattg acttatgact gactataaaa
     4141 atccctattc tagtgtccat gttttggttg ttgatgatga tcaaagtatg atcactttga
     4201 ttgtaacgat ccccaggtgt agggcgtatt cttggtatgt acttggctca ttgactgcta
     4261 tttttaacaa atatgtaccc gaaaataaaa ccccgccaag ttggcggggt cccgattaag
     4321 aatatttttt aagctcatta aataacggat tcaacccatt cctttaattt gcttttcggt
     4381 aacgcgccca ctttagtcgc cgcaacttca ccgtctttaa acaaaatcaa agtcggaata
     4441 ccgcgaacac catatttgga cggcgtttgg ggattatcat caatattaac cttggcgatg
     4501 gttaaccgat
//
LOCUS       DASCNL010000797         1424 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001661542, whole genome shotgun sequence.
ACCESSION   DASCNL010000797 DASCNL010000000
VERSION     DASCNL010000797.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001661542"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..875)
                     /locus_tag="QF359_10510"
     CDS             complement(<1..875)
                     /locus_tag="QF359_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HJO87384.1"
                     /translation="MNNQTNIQILNATVKDAFAGNRLDKFLAESFAEHSRSRIKSLII
                     DGYVTTAGAKVTDPSRRVKPGEKFTVSLPALKLAIPVGQDIELNIVYEDLDLIIIDKP
                     AGLVVHPAPGNPDRTLVNALIAHCGDSLSGISGEVRPGSVHRLDKDTSGLMVAAKNDI
                     AHRGLAVQFSDHSLDRAYKAVVWGVPKAKAGKIEGNIGRNPRNRKKMAVVKHGGKYAL
                     THYQVEQRIGGRNEKWASLIECRLATGRTHQIRVHLTSIGHPIIGDPIYGSKDAKKLG
                     NNVSETFEDAVNNLNR"
     gene            899..1237
                     /locus_tag="QF359_10515"
     CDS             899..1237
                     /locus_tag="QF359_10515"
                     /inference="COORDINATES: protein motif:HMM:NF039467.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6476 family protein"
                     /protein_id="HJO87385.1"
                     /translation="MQKNKALVSLVMGLSVILIGGFALLVFGLVQQASNPNFKFFKSN
                     EAVPADVKAKPPANISIPIPQGSKVGEIEVSEGKIIVHLTTEARQDRILILDAETGVI
                     IRRIRLEPQR"
     gene            1234..>1424
                     /locus_tag="QF359_10520"
     CDS             1234..>1424
                     /locus_tag="QF359_10520"
                     /inference="COORDINATES: protein motif:HMM:NF025819.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mov34/MPN/PAD-1 family protein"
                     /protein_id="HJO87386.1"
                     /translation="MNGVISLSEQQFKIIQATAEAAYPAECCGLLAGNILAENHIVKR
                     VIPSPKIVADQAKDRFEIDP"
BASE COUNT          372 a          362 c          330 g          360 t
ORIGIN      
        1 cgattgaggt tgttaaccgc gtcttcaaac gtttcagaaa cattgtttcc caattttttg
       61 gcatcttttg aaccataaat tgggtcccca atgatcggat gaccgatgct ggttaggtga
      121 acgcgtatct gatgagtgcg cccggttgcc agccggcact cgatcaaact agcccatttt
      181 tcattacgcc caccaattct ttgctcaact tggtaatgcg tcagtgcgta tttgccgccg
      241 tgctttacca ccgccatttt cttgcggttg cggggattgc ggccaatatt tccttcgatc
      301 ttaccggcct tggccttcgg cacaccccaa acaactgctt tataggcacg atcaagagaa
      361 tggtcagaaa attgcactgc caaaccccga tgggcgatgt cattttttgc tgccaccatg
      421 aggccgctgg tatccttatc caagcgatgc acactgccgg ggcgcacctc gccactgatc
      481 ccggatagac tatcaccgca atgagcgatc agcgcgttaa ctaaggtccg gtcaggattt
      541 cccggtgccg gatgaaccac cagacctgca ggtttatcaa taataatcaa atcaagatct
      601 tcatagacaa tattcagttc aatatcctga ccaaccggga ttgcgagctt taacgccggc
      661 aaggagaccg taaatttttc accgggtttg acccggcgtg aggggtccgt tactttcgcc
      721 cccgctgtcg taacatatcc gtcaataatc aacgatttga tgcgggagcg tgaatgttcg
      781 gcaaaacttt cggccaagaa cttgtcgaga cggttgccag caaatgcatc ctttaccgtg
      841 gcgttgagga tttgaatgtt cgtttgatta ttcatacgga gaagactgga ccaaaaacat
      901 gcaaaaaaac aaggccttag tttcacttgt tatgggtctc agcgtcatct taatcggtgg
      961 cttcgcgcta ttggtctttg gactggtcca acaggccagc aacccgaact tcaaattctt
     1021 taaaagcaat gaagcggtac cagcggacgt taaggccaaa ccaccagcaa atatctcaat
     1081 tccgataccg caaggctcaa aggtgggtga aatagaagtc tccgaaggta aaataatcgt
     1141 acatctcacg actgaagcaa ggcaggatcg aatattaatt ttggatgccg aaaccggcgt
     1201 tatcattcgc cgtatccggt tagagcctca aagatgaacg gcgtgattag cctgagcgag
     1261 caacaattca aaataattca agctacggct gaagccgcct accccgctga atgctgcggt
     1321 ttactggcag gcaatattct tgccgaaaac cacattgtta aacgtgttat cccgagtcct
     1381 aagattgttg ccgatcaggc aaaagaccgc ttcgaaatcg atcc
//
LOCUS       DASCNL010000798         1504 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001666074, whole genome shotgun sequence.
ACCESSION   DASCNL010000798 DASCNL010000000
VERSION     DASCNL010000798.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001666074"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1208)
                     /locus_tag="QF359_10525"
     CDS             complement(<1..1208)
                     /locus_tag="QF359_10525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87387.1"
                     /translation="MGDKTQNNSTAALMSRLARESIRPYVGWIVAAIICMALVAAATA
                     ASAWLMKPVINDVFFAKNETLLWIIAAAVFITFAIKGLANYGQSVLMSYVGQRIITDT
                     QHRLYAHLTRMELGFFHDNPTGNLISRFTIDINMMRAAVSNALTGLGKDFLSLIGLVG
                     VMFWQDWQLGLIAFVVFPVAVIPIARLGKRMRKVTVNTQEEMGQFTTLLEQTFQGARV
                     VKSYGMEEYEKSRVRAIAERVFSLVFKAARVRSLASPIMESLGGVAITLVIAYGGFRV
                     IHDSMDPGSFFSFITALLLAYEPMKRLANLNATLQEGLAGAQRLFQLLDREPTIQEKP
                     NAKALAITGGGIKLKDLQFSYVTGQAALADLSFDVPAGKTVALVGPSGAGKSTILNLI
                     PRFYDVDNGR"
BASE COUNT          409 a          370 c          382 g          343 t
ORIGIN      
        1 atccggccgt tatcaacatc atagaagcgc gggattaaat taaggatggt cgatttgccg
       61 gcacctgagg gtccaaccaa agcaaccgtc tttccagccg gcacatcaaa actcaaatcc
      121 gcgagggctg cttgtccggt tacataggaa aattgaaggt ctttcaattt gatgccgccg
      181 ccggtaatcg ccagcgcttt ggcattgggt ttttcctgaa ttgttggttc gcggtcgagc
      241 aattggaaca accgttgggc accggcgaga ccttcctgca gtgtagcatt taagttagcc
      301 agccgtttca ttggctcata agccagcagt agagcagtaa taaaggaaaa gaacgagccc
      361 gggtccatgc tgtcatggat aactcggaaa ccgccatagg cgattaccag ggtaatggca
      421 acaccgccga ggctttccat aatcgggctg gcgagagagc gcactcgagc ggctttaaac
      481 accaacgaaa acacccgctc ggcaatcgca cgaacacgag atttttcgta ttcctccatg
      541 ccgtatgatt tgaccacccg ggccccttgg aaggtttgct caagcaaagt tgtgaactga
      601 cccatttctt cctgtgtgtt gaccgtgact ttgcgcatcc gtttgcccaa ccgcgcaatt
      661 ggaataacag cgacgggaaa aacaacaaag gcgatgaggc ccagctgcca gtcctgccag
      721 aacatcacac caaccaatcc gatgagcgac aaaaaatctt tacccaggcc agtgagcgcg
      781 ttcgagacgg cagcgcgcat catattgatg tcgatggtga agcgggagat tagattgccg
      841 gttggattgt cgtgaaaaaa accgagctcc attcgggtca gatgggcata aagcctatgt
      901 tgggtatcgg taataatgcg ctggccgaca tagctcataa gcacagattg gccgtaatta
      961 gcgagacctt tgatagcaaa ggtaataaaa acagcggcgg cgataatcca aagcaaagtt
     1021 tcatttttgg cgaaaaagac atcgttgata accggtttca tcagccaagc acttgccgca
     1081 gttgctgctg ccaccaaggc catgcaaata attgccgcga cgatccagcc gacatacggc
     1141 cggatgcttt cccgcgccaa acgggacatc aaggcagctg ttgagttgtt ttgcgtttta
     1201 tcgcccaaag tattgaattc cttataaata tgacggtgca aacttgccga tatctaattt
     1261 gccggaacat agcacgggaa ctgataaaaa gtcacttaac agccgcaatt taatgaaaat
     1321 cgccggtaaa tttattttac ggaatatttc ccggtcgtta gcattaggat ttgtgccgct
     1381 taggaatgtt ccaaggcaca ggtgcggaag ccggcgaaaa tatcgttccg gtagggctgg
     1441 aagaagttcc gtaacgtgtt gtaagcgaaa cgctggcgtg tcccccaaga gcctcctttc
     1501 aaca
//
LOCUS       DASCNL010000799         1103 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001666368, whole genome shotgun sequence.
ACCESSION   DASCNL010000799 DASCNL010000000
VERSION     DASCNL010000799.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1103)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1103)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001666368"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            76..663
                     /locus_tag="QF359_10530"
     CDS             76..663
                     /locus_tag="QF359_10530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HJO87388.1"
                     /translation="MHSNQTSNNDSDPYISGQLLIAMPGMRDERFFKTVIYMCAHTEE
                     GAMGLVLNQVMDSLSFPDLLEQLGIDEGNVGESVPIHFGGPVEAGRGFVLHSAEYQQD
                     ATLEVDDGVALTATVDILKAIARGYGPRQSLLALGYAGWGPGQLDDEIRANGWLQAPA
                     DHELIFGGDQETKWERSIAKIGIDPRMLSDEAGHA"
     gene            complement(667..858)
                     /locus_tag="QF359_10535"
     CDS             complement(667..858)
                     /locus_tag="QF359_10535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87389.1"
                     /translation="MSDPEITEVQFHTFSIVYFQLIKYLHPDHVIEIDVPNHIIEELE
                     PFTEQALDMLAETADPFES"
BASE COUNT          273 a          252 c          288 g          290 t
ORIGIN      
        1 atcattcggt gaagtaggtt tatttaagac ctcttcttga ttatgagaga taggaacgcc
       61 atttatatag gtagcatgca cagcaaccag acatccaata acgattccga tccctatatc
      121 tccgggcagc ttttgatcgc catgccggga atgcgggatg agcgtttttt caaaaccgtt
      181 atttatatgt gcgcccatac cgaagaaggc gcgatgggtc tggtgctcaa tcaagtgatg
      241 gattcacttt cttttcccga tctgctggag caactcggta ttgatgaggg taatgtcggc
      301 gagtcggtgc cgatccattt tggtggaccg gttgaagctg gccgcggttt cgttttgcat
      361 tcagccgaat atcaacagga cgccacctta gaagtagatg atggggtcgc actgacagcg
      421 acggtcgaca tcttaaaagc catcgcccgc ggttatggtc cccgacaaag cctgctggcg
      481 cttggctatg cgggctgggg accgggtcag ttggatgatg agatccgcgc taatggctgg
      541 cttcaagcgc cggcagatca cgaacttatt tttggcggcg atcaggaaac caaatgggag
      601 cggtcaatcg ccaaaatcgg tattgatccg cgcatgcttt ccgacgaagc gggccacgcc
      661 tagaaattaa ctctcaaacg gatcagcagt ttctgccagc atatccaatg cttgctcggt
      721 gaatggctca agctcttcga tgatgtgatt cggcacgtcg atttcgataa cgtggtccgg
      781 gtggagatat ttaattaact gaaaatagac aatgctgaag gtatgaaact gcacctcggt
      841 gatttcggga tcactcatcc agtttttgcc cgattctttg aacaaactac tgatggcaga
      901 gccgtcgccg taacaatcaa aatcccggta aaaagtgaag ccttcttctt ccagccggac
      961 aaatatgggg catctatttt gatcttgatc aaaatgtttg cagactgtgc tggcgtgtgt
     1021 gtcgtaattg agtgtttaaa tttggtcgcg acacagcaaa gagcatcaca atttcacaat
     1081 cgggcatgag cttcgactta tcg
//
LOCUS       DASCNL010000800         3627 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001668207, whole genome shotgun sequence.
ACCESSION   DASCNL010000800 DASCNL010000000
VERSION     DASCNL010000800.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3627)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3627)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3627
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001668207"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="QF359_10540"
     CDS             <1..272
                     /locus_tag="QF359_10540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3D domain-containing protein"
                     /protein_id="HJO87390.1"
                     /translation="QGVALTSGRSLAVDSKYLPLGAPLWLDTSDPLTNRPIRRLMIAQ
                     DTGGAITGPVRGDFFWGAGERARAAAGRMKQSGQLYILLPRSVRR"
     gene            311..547
                     /locus_tag="QF359_10545"
     CDS             311..547
                     /locus_tag="QF359_10545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87391.1"
                     /translation="MTGTTSNFGLKVSLFVRCLVDLIKPSIGFAAIKLQEDADLPRVV
                     NWVIGSSRNGDIKQKILHNIHDPRHLHIIIVDEA"
     gene            552..1124
                     /locus_tag="QF359_10550"
     CDS             552..1124
                     /locus_tag="QF359_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HJO87392.1"
                     /translation="MAKKKKEIDDADLLAAAFKDVEPLPNREIKKNHDQQPPKEKIAI
                     KRSSNAYLRAAPPAKSSDQPTLSHGDTPGLDKRSAQRLKRGQMQIEARLDLHGHRQDE
                     AYRALNGFIAGAADAGKRCVLVITGKGMRLDATSYERQIGVLREMVPRWLNKEPNRSR
                     ILSFNHATQADGGTGALYVLLKRQRAGDKS"
     gene            1121..1489
                     /locus_tag="QF359_10555"
     CDS             1121..1489
                     /locus_tag="QF359_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HJO87393.1"
                     /translation="MTPFGKRVRELRAAKNIRLKQMAEDLHVSSAYLSALEHGNRGRP
                     GPGFVMQIAMYFELIWDEVDELKELAELSHPRVPVDTSGLDPKATLLANLMAKHIREL
                     DDFTITRILAQMGFDETETP"
     gene            complement(1632..>3627)
                     /locus_tag="QF359_10560"
     CDS             complement(1632..>3627)
                     /locus_tag="QF359_10560"
                     /inference="COORDINATES: protein motif:HMM:NF006192.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional aldolase/short-chain dehydrogenase"
                     /protein_id="HJO87394.1"
                     /translation="NQYSEKAARTAINRARKTKTPRDLALCVYVSQLLGNVPDLVRHG
                     GGNSSVKTKEGFLYVKGSGSSMASIEPAGFPTLDLEGLTDLQSLPELSDEALTKVLRT
                     AKLDPDAPNPSVETLLHAFLPDKFVLHTHANVVLALTNQANGAKRCAKAFGAQAAVVP
                     YVMSGLALAKKVAAARQKNSEIDGVVLMKHGLFTFGETVKEAYDRMIKLVNLGEKALK
                     KKRQKVFKAQKLPVKLSPLADVAPVVRGALGPGWLLDFRSSAKIKNFVKGKELNRYGA
                     AGPVTPDHVIWIKPKPLFLPAPEAGNMEGFSAKADRAVDQFETRYLNYYVKHNQRHGG
                     DKIVRDATPRVVLVPGLGLFGVGRSMHEAGIAADLAETNIVVITAAEAIGRYRSASER
                     DIFDIEYWSLEAAKLDAVQLLPLQGQVALVTGGGSGIGAATAQAFADQGASVVVVDLN
                     TNAVAKIADDIGGLGLVCDVTNPKDVRRAFDQACKSFGGVDIVVSNAGAAWQGEIGTV
                     DEAVIRKSFELNFFAHQSIAQNAIRVMRAQGLGGRLLFNTSKQAVNPGVNFGPYGLPK
                     ATTLFLMRQYAVDHGKDGITSNAVNADRIRSGLLTDDMIAARSRARALSADDYMSGNL
                     LGEEVTAEDVAKAFVDLALSPKTTAAVITVDGGNIAAALR"
BASE COUNT          882 a          994 c          905 g          846 t
ORIGIN      
        1 cccaaggcgt ggcactaaca tcaggccgca gcctcgctgt tgatagcaaa tatctgcccc
       61 tgggcgcgcc gctatggctt gataccagtg atccgctgac caaccggccg atccggcgct
      121 tgatgattgc ccaggatacc ggcggagcta ttaccggccc ggtgcggggt gattttttct
      181 ggggtgcagg tgagcgggcg cgggccgccg ccgggcggat gaaacaatcg ggccagcttt
      241 atatactttt accgcgttcc gttagacgct aagactttac tttatttcag ttaatcggca
      301 ttttggtcag atgacgggta caacttctaa ttttggtctg aaagtcagcc ttttcgtacg
      361 ctgtctggta gatttaataa aacccagcat tggctttgcc gccattaagc tacaagaaga
      421 tgctgatctg ccccgtgtcg ttaattgggt catcgggtcg tcccgtaacg gcgacatcaa
      481 acaaaaaatc ctacacaaca ttcacgatcc ccgccacctt catattatta tcgtcgatga
      541 ggcgtaagag tatggcaaaa aagaaaaaag aaattgatga tgctgatctt ttggccgctg
      601 ctttcaaaga tgtagagcca ttaccgaacc gcgagatcaa gaaaaatcac gaccagcagc
      661 cacctaagga aaaaatcgcg atcaaacgct cctctaatgc gtatctaagg gccgcgccgc
      721 cagccaaaag ttccgatcaa ccaaccctca gtcatggtga tacaccaggc cttgataaac
      781 gctcagccca acggctcaaa cgcggccaaa tgcaaataga agctcggctt gatctccatg
      841 gtcaccggca ggatgaagcc taccgggcac tcaatggctt tattgccggt gcggcggatg
      901 cgggtaaacg ctgcgtcttg gtaatcaccg gcaaggggat gcggttggat gccacatcat
      961 atgagcgcca aatcggtgtg ctgcgggaaa tggtgccgcg ctggctcaat aaagaaccca
     1021 atcgcagccg cattctgtct ttcaatcacg ctacccaggc tgacggcggt accggcgcgc
     1081 tctatgtttt gttgaaacgg cagagggccg gagataaatc atgacgccat tcggcaaacg
     1141 ggtacgggaa ctcagagcgg caaaaaatat tcggctcaag caaatggcgg aagaccttca
     1201 tgtttcatcc gcttatctat cggcgcttga gcatggcaat cgtggccgcc cgggtccagg
     1261 ctttgtcatg cagatcgcga tgtatttcga gctcatatgg gatgaagtag atgaactgaa
     1321 agagctcgct gaactatctc atcctcgggt gccggttgat acgtcgggcc tcgacccgaa
     1381 agcaacgctg ctggcgaacc tcatggccaa gcacattcgt gagcttgatg acttcaccat
     1441 cacccgcatc ctcgcacaga tgggttttga cgaaacagaa acaccgtaaa aaatattcta
     1501 taatttcaag tggtggcgtc tgcttttgga atttttagcg acttcccact tgtttgatta
     1561 ttcaaatcct ctgtgatctc tatggttcaa atttttttgg acgaacgccc ccttaattag
     1621 atctaataaa tctatctgag cgcagcggca atattgccgc cgtcaacagt gatgacggcc
     1681 gccgtggttt tgggtgagag cgccagatcc acaaaagctt tggcaacgtc ttcggcggtg
     1741 acttcttcgc ctaaaagatt accgctcata taatcgtctg cggacaaagc acgcgccctg
     1801 gaacgcgccg ctatcatgtc atcggtcagc aagccggaac ggatacggtc ggcgttaacg
     1861 gcgtttgagg taatgccgtc cttaccgtgg tcgactgcgt attgccgcat caaaaacaat
     1921 gtcgttgcct tgggcaaacc gtaggggccg aaattaacgc ccggattgac ggcttgtttg
     1981 gaggtattaa acagcagacg cccaccgagt ccctgcgccc gcatcacgcg gatcgcattt
     2041 tgggcaatcg attggtgagc aaaaaagttg agctcaaaac ttttacggat aacagcctca
     2101 tcgaccgtac ctatctcgcc ctgccatgcc gcaccggcgt tcgacaccac aatatcaacc
     2161 ccgccgaagg atttgcaggc ttggtcaaaa gcgcggcgaa cgtcttttgg attggtaaca
     2221 tcgcaaacca gacctaaacc accaatatca tcagcgattt tagctaccgc attagtattc
     2281 agatcaacca ccaccaccga tgctccctga tcggcaaaag cctgagctgt tgccgccccg
     2341 attcctgaac cgccaccggt gaccagggcg acctgtcctt gcaaaggtag cagctggaca
     2401 gcatcgagct tggcagcttc cagcgaccaa tactcaatat cgaatatgtc gcgttcgctc
     2461 gctgagcggt agcgaccaat ggcctcggct gcggtgatga ccacaatatt ggtttcggca
     2521 agatcggcag caatgccggc ttcgtgcata ctccggccaa caccaaagag ccctagcccc
     2581 ggcaccagaa cgaccctcgg cgttgcatca cggacgattt tgtcgccgcc atggcgctgg
     2641 ttgtgtttga cgtaataatt caaatagcgg gtctcgaatt gatcaaccgc cctgtctgct
     2701 ttagccgaaa aaccttccat atttccagcc tcgggtgccg gcaaaaagag tggcttcggc
     2761 ttgatccaga tgacatgatc aggggtcacc ggaccggcag caccatagcg attaagctct
     2821 ttgcctttta caaagttttt aatcttagca ctgctgcgaa aatccagcag ccaaccgggt
     2881 ccgagggcac cccggacaac cggcgcaacg tcggcaagcg ggcttagttt caccggcagc
     2941 ttttgtgcct tgaaaacttt ctggcgtttt ttcttgagcg ccttttcgcc caaattcacc
     3001 agcttaatca tgcggtcgta ggcttccttg actgtttcac caaaagtaaa cagcccgtgt
     3061 ttcatcaaaa ccacgccatc gatttcagaa tttttttgcc ttgccgctgc cacttttttt
     3121 gccaaagcca aacccgacat tacataaggc actaccgcgg cttgcgcgcc aaaagccttg
     3181 gcacaccgtt ttgcgccatt agcctgattg gttaacgcca gcaccacatt ggcgtgtgtg
     3241 tgcaacacga acttatccgg caaaaaggcg tgcaacaggg tttccaccga cggattggga
     3301 gcgtccggat caagcttggc ggtccgcagc actttcgtca gcgcttcatc ggaaagttcc
     3361 gggagcgact gcagatcggt gaggccctca aggtcaaggg taggaaatcc agctggttcg
     3421 atactggcca tactggaacc actgcctttg acgtaaagaa atccctcttt agttttcacc
     3481 gagctattac cgccgccatg gcgcaccaaa tccggcacat tgcccaatag ctgagaaaca
     3541 taaacacaaa gagccaggtc ccgaggagtt ttggttttac gcgcgcgatt aattgctgtt
     3601 cttgccgctt tttctgaata ttgattt
//
LOCUS       DASCNL010000801         1582 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001669575, whole genome shotgun sequence.
ACCESSION   DASCNL010000801 DASCNL010000000
VERSION     DASCNL010000801.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001669575"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1323)
                     /locus_tag="QF359_10565"
     CDS             complement(<1..1323)
                     /locus_tag="QF359_10565"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HJO87395.1"
                     /translation="MNSSDKITDKAQLSAYIASGCKPDQNRRIGTEHEKFAFSLNTLK
                     PLTYAGPNGIRVLLEKLTEFGWEPVLENGQPIALTKPDHSSITLEPGGQVELSGAPLE
                     TIHQTCREVTGHIKQVKDVADELGAGILGLGYQPKWSLDDVGWMPKGRYKIMREYMPT
                     RGSLGLHMMLATCTVQVNLDFRSESHMAEMFRAALALQPLATALWANSPFRDGKKNDF
                     LSFRSHIWTDTDPDRCGVMPFVFEDNFGFESYVDYMLDMPMYFVYRDGQYIDASGLSF
                     WDFMAGKLPALPGETPSIKDWEDHLTTAFPEVRLKKFIEMRGADGGPSKNLCALPAFW
                     VGLLYDDQALADVTSMISDWSYDEVSALRDEVPIAALKTPFRGSTLQDLAKDVLAIAK
                     QGLERRAKLDGSGQDETVFLNPLHAIAESGITPAEELLAHFDGDWAGSV"
     gene            complement(1352..>1582)
                     /locus_tag="QF359_10570"
     CDS             complement(1352..>1582)
                     /locus_tag="QF359_10570"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016436 - rRNA (uridine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HJO87396.1"
                     /translation="GDAGVSMATLGKSKDGQACDAILIGPEGGFSASELDLLGNLPFV
                     TKVSLGGRLLRAETAALAALTLWQELIGEIYK"
BASE COUNT          397 a          429 c          376 g          380 t
ORIGIN      
        1 gacactgccg gcccaatcgc cgtcgaaatg agccagtaat tcttcggccg gtgtgatccc
       61 gctttcagca atggcatgca gcggattgag gaaaacagtt tcatcctgtc cagagccatc
      121 aagttttgcc cggcgttcaa gaccttgctt ggcaattgcc aacacatcct tggctaaatc
      181 ctgcagcgta ctgccccgaa acggtgtttt aagggccgcg atcggtactt catcgcgaag
      241 cgccgaaact tcgtcatagg accaatcgct gatcattgaa gtaacatctg cgagtgcctg
      301 atcatcatag agcagcccaa cccaaaacgc cggcagcgca cagagatttt tggatggccc
      361 gccatcggca ccgcgcattt caataaattt cttgagccgt acttccggaa aagccgtggt
      421 cagatgatct tcccagtctt tgatactagg tgtttcaccg ggcagcgctg gcagttttcc
      481 cgccatgaaa tcccagaaag acaaaccgga cgcatcaata tattggccgt cccggtaaac
      541 aaaatacatt ggcatatcga gcatgtaatc aacataggac tcgaagccaa aattatcttc
      601 aaacacaaag ggcataacgc cgcaacggtc gggatcggta tcggtccaaa tgtggctgcg
      661 aaaactcagg aaatcatttt tcttaccatc ccgaaacggc gaattagccc aaagggccgt
      721 cgccaaaggc tgcaatgcaa gcgctgccct aaacatctca gccatatggc tttcggaacg
      781 aaaatcgaga tttacctgta cggtacaagt tgccagcatc atatgaagac caagtgaacc
      841 acgcgttggc atatattcgc gcataatttt atagcggcct ttgggcatcc atccgacatc
      901 atccagcgac cattttggct gatagccgag cccgaggatt ccagcgccta attcatcagc
      961 aacgtctttg acttgtttga tgtgcccggt cacttcccgg caagtttggt ggatggtctc
     1021 aagtggcgca ccggaaagtt caacttggcc acccggctcc aaggttattg aactatgatc
     1081 gggtttcgtc agggctattg gctggccgtt ttccagcacg ggctcccagc caaattccgt
     1141 gagcttttcc aacaataccc ggatgccatt tggccccgca taggtcagcg gctttaaagt
     1201 gttgagacta aaggcaaact tttcatgttc ggtaccgatt cgcctatttt ggtcgggctt
     1261 gcagccagag gcgatatagg cagataattg tgctttgtcg gtgattttat ccgaagagtt
     1321 cattcaggct tatttccaaa cattaggctt attatttata aatctctcca atcaactcct
     1381 gccagagggt tagcgctgcc agggcagcgg tttcagcgcg caataatctc cccccgaggc
     1441 tgactttggt aacaaagggc agatttccga gcaggtcaag ctcagatgct gaaaacccgc
     1501 cctccggccc gatcaaaatc gcgtcacaag cttgaccgtc tttagatttc cctagcgttg
     1561 ccatggaaac gccagcgtca cc
//
LOCUS       DASCNL010000802         1974 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001671460, whole genome shotgun sequence.
ACCESSION   DASCNL010000802 DASCNL010000000
VERSION     DASCNL010000802.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001671460"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="QF359_10575"
     CDS             complement(<1..522)
                     /locus_tag="QF359_10575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HJO87397.1"
                     /translation="MAEAISIIAEARDRAGKGVARATRREGKVPAVIYGNKLDTVLIS
                     IDGKELIRLIHNPGFFTHIFDITVAGDNHQVLARDLQLDPVTDHPMHVDFLRFNENTK
                     IVLEIPVAFYNEEESPGLKRGGVLNIVRREIELRCSPLNIPQDLQIDLTGMDIGDSVH
                     ISAIKLPDGVEPIT"
     gene            complement(661..1593)
                     /locus_tag="QF359_10580"
     CDS             complement(661..1593)
                     /locus_tag="QF359_10580"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HJO87398.1"
                     /translation="MKVLSCNSNRPIAEAISAYLNLPLTSASIRRFSDMEVFVEINEN
                     VRGEDVFAIQSTSYPANDNLMELLVTMDALRRGSARRITAVLPYFGYARQDRKSGPRT
                     PISAKLVANLITEAGADRVLTLDLHAGQIQGFFDIPLDNLYAAPVFTKDIEDKYNGDD
                     LMMISPDVGGVVRARAFAKRLNTDLAIIDKRRERAGESEVMNIIGDVKDRRCILIDDI
                     VDSGGTLCNAAVALMDQGAKSVSAYITHGVLSGGAVARISSSPLENLVSTDSIMATEA
                     MRVAHNISQITIAPLIAEAMRRISDENSVSSLLD"
     gene            complement(1734..>1974)
                     /locus_tag="QF359_10585"
     CDS             complement(1734..>1974)
                     /locus_tag="QF359_10585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87399.1"
                     /translation="NISPSYGGSNDVTITWLVATKDGKELGKITQNNKVPVGALAGRW
                     GDIAHVVTQGASIGIIDVVEQQRALKDNKKRLLVP"
BASE COUNT          529 a          505 c          468 g          472 t
ORIGIN      
        1 ggtaataggc tcgacaccgt ccggcagttt tattgccgaa atatgaaccg agtcaccaat
       61 atccataccg gtgagatcaa tctgaagatc ttgcgggata tttaatggcg agcaacgcaa
      121 ttcaatttca cggcgcacaa tgttcaacac gccaccgcgt tttagcccag gtgattcttc
      181 ttcgttgtag aaggccaccg gaatctccag cacgatcttg gtgttttcat taaaccgcaa
      241 aaagtcgaca tgcatcgggt gatccgtcac aggatcgagt tgcaaatcac gcgccagcac
      301 ctgatggtta tcgccagcaa cggtaatatc aaaaatatgg gtaaaaaatc cagggttgtg
      361 aatcagacga atcagttctt tgccatcaat agaaatcaaa actgtgtcta gtttattacc
      421 ataaataacc gctgggactt tgccctcgcg acgtgttgct cgtgccaccc ccttgccggc
      481 ccgatcacgc gcctcggcga tgatactaat agcttcagcc atttttaaac tcctcaaatt
      541 aaggcgttaa gacgtcttcg cctccagggg tgccaagcac gcggatttaa cgctttggaa
      601 aggcgaggat ttatagctta atggacaccc tgtcaacaca gacagttgag tctgagcagc
      661 ttaatctaac aggctagaaa cggaattttc atcgctaatc cgccgcattg cctcagcgat
      721 cagcggcgca atggtaatct gcgaaatatt atgggcaacg cgcatcgctt cggtggccat
      781 gatactgtcg gtcgacacca aattttcgag cggagaagac gagatgcggg caaccgcacc
      841 accggataaa acaccgtggg tgatataggc cgaaaccgac ttggctccct gatccatcag
      901 ggcgacggca gcattgcaaa gcgtgccacc ggaatcgaca atatcgtcga tcaagataca
      961 gcggcggtct ttgacgtcac cgatgatatt cataacctca gactcaccag cccgttcccg
     1021 ccttttatca ataatagcga gatcagtatt gagccgcttg gcaaaagccc gggcccgtac
     1081 aacaccaccg acatcgggtg aaatcatcat gagatcatcg ccgttatatt tgtcttcgat
     1141 atctttggta aaaaccggcg ctgcgtagag attatcgagc ggaatatcaa agaacccttg
     1201 aatttgcccg gcatggagat cgagagttaa aacccggtcg gcacctgctt cggtaatcaa
     1261 attggcaacc aatttggctg aaatcggcgt tcttgggccg gatttgcggt cttggcgtgc
     1321 ataaccaaaa tagggcaaga cggcggtgat tcgccgagcc gagccgcgcc ttaacgcatc
     1381 catggtcacc agcaattcca tcagattatc attggccggg taggatgtgg attgaatggc
     1441 aaagacatct tcgccacgaa cgttttcgtt gatctctaca aaaacctcca tgtcggagaa
     1501 gcggcgaata ctcgcgctgg tcagtggcag attaaggtag gcggagatcg cttcagcgat
     1561 cgggcgatta ctattacagc tgaggacttt catcctggca ggaccccttt agatagaacg
     1621 ggctggaaac cccaaaacca tcgaactcac tccagccgga aactcaattt ttttaacagt
     1681 gagtcaggtt gatgtaaacg gaatagattc cttaaatttt gaatcctcag aaatcacgga
     1741 acgagcagtc gttttttgtt atctttaaga gcacgctgct gctcgacaac atcgataata
     1801 ccgatgctgg caccttgcgt tacgacatgc gcaatatcac cccaacggcc agccaaagca
     1861 ccgaccggca ccttgttgtt ttgcgtgatt tttccaagtt ccttcccatc tttagtcgct
     1921 accagccagg taatggtgac atcatttgaa cctccataag acggactaat gttg
//
LOCUS       DASCNL010000803         1627 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001671692, whole genome shotgun sequence.
ACCESSION   DASCNL010000803 DASCNL010000000
VERSION     DASCNL010000803.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001671692"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..640)
                     /locus_tag="QF359_10590"
     CDS             complement(<1..640)
                     /locus_tag="QF359_10590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HJO87400.1"
                     /translation="MSTQVTTLGSGLRIVTDYMSTVETASVGAWVAVGTRHEKPELNG
                     ISHLLEHMAFKGTRRRSALSIAEEIEAVGGHLNAYTSRENTAYFAKILKEDVPLAVDI
                     IADILQHATMEATELERERAVVIQEIHQSNDTPDDIIFDHFQKTAYPDQAMGRPVLGA
                     AKLIEALPRETIVNYMKGQYSASKVVVAAAGNVDHDAFVKLAEAAFCDLPEEN"
     gene            complement(637..>1627)
                     /gene="thrC"
                     /locus_tag="QF359_10595"
     CDS             complement(637..>1627)
                     /gene="thrC"
                     /locus_tag="QF359_10595"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HJO87401.1"
                     /translation="TSGDTGSAAIEACRDRDAIEIFILHPKDRVSEVQSRQMTTVLSG
                     NVHNIALDGTFDDCQDTIKALFGDEDYRHEHNLSAVNSINWARIMAQIVYYFWTAVEL
                     GAPDRKFVYAVPTGNFGNVYAGYAAKQMGLPIEKFIVSSNENDILTRFFDTGTMSMKP
                     VVPTPSPSMDIQISSNFERLLFDHYDRDGKAVAKALEEFRHTQSINFGQDIWQAMLED
                     FEGYRISNDETKAAIRNVYETTGELLDPHSVIGVIAGQQGKVSPEAIKITLATAHPAK
                     FPAAVEEAAGIHPELPSHLTDLFEWEERFDELPNSLDQMREFITGKLAERKAA"
BASE COUNT          389 a          419 c          399 g          420 t
ORIGIN      
        1 cattttcctc cggtaaatca caaaaagcag cttcagcgag ttttacaaat gcgtcatgat
       61 cgacattgcc agccgcagca acgaccactt ttgacgccga atattgacct ttcatataat
      121 tgacgatggt ctctcgtggc aaagcttcaa tcagtttagc cgcacccaat actggacggc
      181 ccatggcttg atccggataa gcggttttct gaaagtgatc gaagatgatg tcatcggggg
      241 tatcattaga ttggtgaatt tcctgaataa caacagcacg ttcacgctcc agctccgttg
      301 cttccatggt tgcgtgttgc agaatgtcgg caatgatatc gacggcgagc ggcacgtctt
      361 cttttaggat cttggcaaaa taagcggtgt tttcccggga tgtataagca ttgagatggc
      421 cgccgacagc ttcgatttcc tcagcaatag agagagccga gcgccgcctg gtacctttaa
      481 atgccatatg ctccaacaaa tgtgaaatac cattgagctc cggtttctcg tggcgcgtac
      541 cgacagcaac ccaggcgccc actgacgcag tttcgacagt actcatataa tctgtaacga
      601 tgcgcaggcc cgatcctagc gtggtgacct gtgtgctcat gcagcttttc tttcggccag
      661 tttaccagtg atgaattctc gcatttgatc gagactattg ggcaactcat caaaacgctc
      721 ttcccactca aacaggtcag tgagatgaga tggcagttcc gggtggatgc cggcagcctc
      781 ttcgacggca gctggaaatt tagccggatg agccgtggcg agggtgatct ttattgcctc
      841 cggtgatact ttgccctgtt ggccggcgat gacgccaatg acgctgtgcg ggtcgagtaa
      901 ttcaccagtt gtttcataga cattgcgaat agcagcttta gtttcatcat tgctaatgcg
      961 gtagccttca aagtcctcca gcattgcctg ccatatgtct tggccaaaat ttatactttg
     1021 ggtgtggcga aattcttcca gcgctttggc cacggcttta ccgtcccggt cataatgatc
     1081 gaacaacaga cgctcaaaat tactggagat ctgaatatcc atactcggac tgggcgttgg
     1141 caccaccggc ttcatcgaca tcgtgccggt atcaaaaaag cgcgtcagaa tgtcgttctc
     1201 gttcgagcta acaataaatt tctcaatcgg caatcccatt tgcttggcgg catacccggc
     1261 atagacattg ccgaaattgc cagtcggtac agcgtacaca aacttccggt ctggcgcacc
     1321 aagctcaacg gcggtccaaa agtaatagac gatctgggcc atgatgcgcg cccaattgat
     1381 cgagttgacg gctgacagat tgtgctcatg gcgataatct tcatcaccaa acagcgcttt
     1441 gattgtatcc tgacaatcat caaaggtgcc atccaacgca atgttatgaa cattaccgga
     1501 cagcacggtc gtcatctggc ggctttggac ttctgatacc cggtcctttg gatggagaat
     1561 aaatatttcg atggcgtcgc ggtcccggca cgcttcgatt gccgccgaac ccgtatctcc
     1621 tgaggtt
//
LOCUS       DASCNL010000804         1561 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001675123, whole genome shotgun sequence.
ACCESSION   DASCNL010000804 DASCNL010000000
VERSION     DASCNL010000804.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001675123"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..679
                     /locus_tag="QF359_10600"
     CDS             <1..679
                     /locus_tag="QF359_10600"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HJO87402.1"
                     /translation="IGLMNDLLGTSPLGIHILIAVRGDNPDTGDHPLAKGVFDLKSHE
                     LIRIAHEMTTNGIVPARTMKISASGIQSNSKPISEPPQFFLGTVDVPSLAGDDVWAGR
                     LHKRVAAGLQFVQTQACYDMSLVWRYLDFLEDQGLTESLFVVVSNSPQISAQSALWVK
                     ENIWGAEIPDEIIQRLKDAKDPREEGVKICQEQVEELMTMPGIAGINLIESDNLASIA
                     AVLAAIK"
     gene            complement(682..>1561)
                     /locus_tag="QF359_10605"
     CDS             complement(682..>1561)
                     /locus_tag="QF359_10605"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87403.1"
                     /translation="WMWNHAYLLMVLTAVAWSGNSITARWVNDVIPPIGLAFWRWVVA
                     LPILVILAWPYLGKDLPQLKHNWLIIVVLAALSITIYNTLIYEALLTTTAINSFLINT
                     SRPVIIVLMSILFFRQGITPVQSIGFVLALLGTVTIILRGEPVRLLTLEFNSGDFLIL
                     GATIAWALYTVLLPKRPKMHPTSFLAITVFAGTIMLLPLYIWETIYIQPTPFRFETVW
                     SVLYLAIISSIFAYLCYNRAVELAGPNKAGQVSYMLPIVGSTLAILLLGEKFQFFHAI
                     GLPLIFCGVYLGSKGK"
BASE COUNT          427 a          385 c          404 g          345 t
ORIGIN      
        1 tattggccta atgaacgatt tacttggtac gtcgcctctc ggcatccata ttcttattgc
       61 tgtgcgcggc gacaatccgg atactggtga ccaccccctc gccaaaggcg tgtttgactt
      121 aaagagccat gagcttatcc gcatcgccca tgaaatgaca acaaacggta ttgtcccggc
      181 gcggacaatg aaaattagcg ccagtggcat tcaatcaaat tcaaaaccaa tcagtgaacc
      241 gccgcagttt ttcctcggca ccgtcgatgt gccatcactc gctggcgatg acgtttgggc
      301 aggccgtctc cacaaaaggg tcgctgcagg tctgcaattt gtccagactc aagcctgtta
      361 tgatatgtcc ttggtctggc gctatttgga tttccttgag gatcaagggc taacggaaag
      421 tttgtttgtt gtcgttagca acagcccaca aatctccgcc caatcggcac tttgggtcaa
      481 agaaaacatt tggggtgctg aaattccgga tgagattatt cagcgtctca aagatgccaa
      541 ggacccccgc gaagaaggtg ttaaaatctg ccaggagcag gttgaagagc tgatgacgat
      601 gccggggatc gccggtatca atttgattga aagcgataac ctcgctagca tcgccgccgt
      661 tttggcagcc atcaagtaac gttactttcc tttcgagccc agatacaccc cgcagaaaat
      721 aagcggtagt ccgatggcgt ggaaaaactg aaacttctca cccagcaaca agatcgctag
      781 ggtcgaacct acgatcggca gcatataaga gacctgcccc gctttgttcg gtccggccaa
      841 ttccaccgcc cggttatagc aaagataagc gaagatcgaa gaaatgatgg cgagataaag
      901 aacactccaa actgtctcaa aacgaaacgg tgttggctgg atatagatcg tttcccagat
      961 atatagcggc aacaacataa tcgtgccggc aaagacggtg atggcgagaa aacttgtcgg
     1021 gtgcatcttt ggtcgctttg gcagcagcac ggtataaagc gcccaggcga tggtcgcacc
     1081 gagaattaga aaatcgcctg agttaaattc caaggtgagc aggcggaccg gctcaccacg
     1141 gaggataatg gttacggtgc cgagtaaggc caggacaaag ccgatgcttt gcaccggcgt
     1201 tataccttgg cggaaaaaga ggatggacat tagaacaatt atgaccggcc tggaggtgtt
     1261 gatcagaaat gagttgatcg ctgttgtcgt cagcagagcc tcgtaaatca aggtgttata
     1321 aatagtgatg ctgagggcag cgagcactac aataattagc caattatgtt taagctgcgg
     1381 cagatctttt ccaagatacg gccacgctaa aattaccagg atcgggaggg ccacgaccca
     1441 ccgccaaaag gcgagcccga tcggtgggat aacatcgttt acccagcgtg ctgtaatcga
     1501 attaccggac caagcaaccg ccgtcagcac catcagcagg taggcatgat tccacatcca
     1561 t
//
LOCUS       DASCNL010000805         1206 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001675145, whole genome shotgun sequence.
ACCESSION   DASCNL010000805 DASCNL010000000
VERSION     DASCNL010000805.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001675145"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="QF359_10610"
     CDS             <1..484
                     /locus_tag="QF359_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HJO87404.1"
                     /translation="LIHLVAAIIAAYVISFFAGTIEEMVALAVLMPIVAAMGGTASAQ
                     TLAVAVRALAMKELTMANAYRTIGKEVAVGVLNGVIFAVLIGAVTWGWYGSPALGGVI
                     GLSIIINLIVAGFVGSSLPILLQRLGYDPAVASSAFLTSITDVVGFYVFLGLAASLLL
                     "
     gene            complement(481..630)
                     /locus_tag="QF359_10615"
     CDS             complement(481..630)
                     /locus_tag="QF359_10615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87405.1"
                     /translation="MPRIFDKIKAEMKPDTLFVSNSVVVPDHQADEIIEVDNARETKL
                     NLWQN"
     gene            complement(685..966)
                     /locus_tag="QF359_10620"
     CDS             complement(685..966)
                     /locus_tag="QF359_10620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87406.1"
                     /translation="MLPWIFLLVFVALSLVYWNTVHNQVPLYLTTRTTWVALAELLPE
                     EKGGQFIDIGCGIGGALLYSRASTPPFELAWLRRFLTSTRNLKLIYGDF"
BASE COUNT          290 a          285 c          324 g          307 t
ORIGIN      
        1 gctcatccat ttggtagcgg caattattgc ggcttacgta attagttttt ttgccggtac
       61 catcgaagag atggtggctt tggctgtgct gatgccgatt gttgccgcca tggggggcac
      121 ggcctcggcg cagactttag ctgtcgcggt acgtgccctg gcgatgaaag agctgacgat
      181 ggcgaatgct taccggacga ttggcaagga agttgcggtc ggcgttttga acggagtgat
      241 atttgccgtg ttgatcggtg cggtgacctg gggctggtac ggcagtccgg cgctcggcgg
      301 tgttattggt ctctcgatca ttattaacct cattgttgcg ggctttgtcg gcagctcact
      361 gccgatttta ttacagcgtc tgggatatga tccggcagtg gcgtccagcg ccttcctcac
      421 ctcgattacc gatgtcgttg gtttctatgt gttcttaggt ttagccgcca gtttactgct
      481 ttaattctgc cacagattca gtttggtttc acgggcgtta tccacttcaa taatctcatc
      541 ggcctggtga tcaggcacaa caactgaatt actgacaaac aatgtatctg gtttcatctc
      601 agctttgatt ttgtcaaaga ttctcggcat tggctccagt gacagaaaag tataggtaac
      661 atcaaagttg gacaaatttt ctttctaaaa atcgccatag atgagtttga gattgcgcgt
      721 actggtcaga aatctcctaa gccaggccag ttcaaaggga ggggtgctgg cgcgcgagta
      781 cagcaacgcg ccgccaatac cgcaaccgat atcgataaac tgaccacctt tttcctcagg
      841 taaaagttcg gccaaagcca cccaagttgt gcgggtggtg agataaagcg gcacctggtt
      901 atgtaccgtg ttccaataaa ccaaagacaa cgcgacaaag accagtaaga atatccacgg
      961 cagcacctgc caggtgatgg caatttagtg gtgccggcgg taagttgatc tgcaccggca
     1021 ccaccactta gcgaggctca ggcaatggca aagccctgca cttacgacaa caaaacgcgc
     1081 atgagcggtg tcgaaaacca ggaggcggcg tactatagct ggatacattc attaaattag
     1141 gcctaagaat tggcgcacct catcacgcaa caaggcgcgg ataattatgt aaagtccgag
     1201 taacag
//
LOCUS       DASCNL010000806         3413 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001678219, whole genome shotgun sequence.
ACCESSION   DASCNL010000806 DASCNL010000000
VERSION     DASCNL010000806.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3413)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3413)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3413
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001678219"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..697)
                     /locus_tag="QF359_10625"
     CDS             complement(<1..697)
                     /locus_tag="QF359_10625"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJO87407.1"
                     /translation="MTTDFPNIVLIMTDNQPADAVGCYGNNEIHTPNLDALAADGVRF
                     NNAYCPNAMCSPSRASVWSGRMPCQHGVHTWLNDKLMDQWPEDWNAIAEFDTLPEILN
                     RNGYATAMIGKYHLGKLDKPQNGIDHWITMSRGHTLDFYGNEMIVNGDTFIHDGHSVD
                     FFSEKAVDYIDGRTNSPDQPFLLMLPYNGPYGHWPAILGPAKNQFWDRYADMPMTSIP
                     REGLNERAIDAFQL"
     gene            886..2259
                     /locus_tag="QF359_10630"
     CDS             886..2259
                     /locus_tag="QF359_10630"
                     /inference="COORDINATES: protein motif:HMM:NF005683.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO87408.1"
                     /translation="MSSQIRSGDANFIIENNARHVWHPMIDPKMSAENLPVVISGSDG
                     VYISDIEGKVYLDCTASLWNVNVGHNRPEIKAAIVDQLDKLAYYNTFGNASNPPSIAL
                     SALLMEMMEPEGMARVLFSSGGSDAVEGALKLSRQYWKLVGKSEKTKFFSLKNAYHGV
                     HYGGLSVGGGIPWRRAYEPVLPGCFQIDSPYLYRNGWTEDPEELGEICATKLAREIEH
                     QGPDTVAAFIAEPVQGAGGMIVPPANFWPRVREVCDQYEILLIADEVVTGFGRTGSMF
                     GSRHWSVKPDVMCLAKGINSGYVPLGATVVNQRIAEAWEKDDPMAPIMHGYTYSGHPL
                     ACAAALANLEIVIEEDLPANAGTVGGYFLERLNELTQYPRVGDVRGVGLMLAVEFVSD
                     RETKEPIPAFDPYFIAIQEICRKEGVWVRIQANKMIFSPPLVFEKKHVDKALDAVHTA
                     LNKLSEL"
     gene            complement(2304..3179)
                     /gene="gluQRS"
                     /locus_tag="QF359_10635"
     CDS             complement(2304..3179)
                     /gene="gluQRS"
                     /locus_tag="QF359_10635"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HJO87409.1"
                     /translation="MSKKSVIVTRFAPSPTGHLHLGHAYSALFAQRSAQESGGRLLLR
                     IEDIDQTRCLPAYEAAVLNDLAWLGLTWEKPVRRQSDHMADYQAALIKLDEMGLIYPC
                     FCSRKEIHAEIMRINEAPHDATADKRGPVYPGTCRRLYQDDRNMRIAAGDPYALRLNM
                     QKAIYLAEQKRKHLTWVDLDRGGQRATPEVFGDVVLARKDEPTSYHLSVTVDDAVQGI
                     NLITRGEDLRDVTHVHCLLQALLDFDTPDYRFHRLLTDSEGKRFAKRDKSLTLQTLRG
                     EGKTLADVKALVKWA"
BASE COUNT          830 a          839 c          868 g          876 t
ORIGIN      
        1 caagttgaaa agcgtctatc gccctttcat tcaacccttc cctggggata gatgtcatcg
       61 gcatgtctgc gtagcgatcc caaaattggt ttttagccgg acccaagatc gccggccaat
      121 ggccataggg tccgttataa ggaagcatta ataagaacgg ctgatcaggt gaattagtcc
      181 ttccgtcaat gtagtcaacg gctttctcgc tgaaaaaatc gactgaatgc ccatcatgaa
      241 tgaaggtatc tccattcacg atcatttcat tgccgtaaaa atccagcgtg tggccgcggg
      301 acatggtaat ccagtggtca ataccgttct gaggcttgtc caatttacct aaatggtatt
      361 tgccgatcat agccgtggcg tatccattgc ggttcaggat ttcgggcaac gtgtcgaatt
      421 cagcaatggc attccagtcc tccggccact gatccattaa tttatcgttc aaccaagtgt
      481 gcactccgtg ttgacagggc atgcggcctg accataccga agcccgtgag ggtgagcaca
      541 tagcattcgg gcaataggcg ttgttaaaac gcaccccatc cgccgccagg gcgtctaaat
      601 tcggtgtgtg aatttcatta ttgccatagc agcccaccgc gtcagccggc tgattgtcgg
      661 tcataatcag tacgatattt ggaaaatcag tggtcatcga ttgtcgcctc tatcctgtat
      721 ggtcccaaag atacgactca atcgtatttc cccgacacca caatttgcag tttacaagtc
      781 tacccgattt ctcttgacgc aggatcaaat tgaattttat agttcttata aaataaaatt
      841 catttctaat aaagaaactt attaattttc acaagggcaa gtgaattgag tagtcaaatt
      901 cgctcaggcg atgcaaattt catcatcgag aataatgctc ggcatgtttg gcatccgatg
      961 atcgacccaa aaatgtcagc tgaaaatcta ccggtagtca tcagcggaag tgacggcgtt
     1021 tatatctctg atattgaagg taaagtgtat ctcgattgca cggccagcct gtggaacgta
     1081 aatgtcgggc acaatcgtcc tgagatcaaa gcggcgatag tcgatcagct tgataagctg
     1141 gcctattaca acaccttcgg aaacgcttcg aacccgccat caattgcgct atccgctctg
     1201 ttgatggaaa tgatggagcc ggaaggtatg gcgcgggttc tgttttcgtc gggtggttcc
     1261 gatgccgttg aaggggcgct gaaattatca cgacaatact ggaaacttgt tggcaagtcg
     1321 gagaaaacca aattcttctc cctcaagaat gcttatcacg gcgttcacta tggtgggcta
     1381 tcggttggcg gcggtattcc gtggcgacgc gcctacgaac cggtactacc cggatgtttt
     1441 caaattgata gtccttacct ctatcgcaat ggttggacag aagaccccga ggaattgggc
     1501 gaaatttgtg caaccaagct ggctcgggaa atagagcatc agggtccaga tacggtggct
     1561 gcttttatcg cggaaccggt gcaaggtgca ggcggtatga ttgtgccccc agccaatttt
     1621 tggccgcgcg ttcgagaagt gtgtgatcag tacgaaattt tgttgatcgc cgatgaagtc
     1681 gtaacgggat tcggtcggac ggggtcaatg ttcggcagtc gccattggag tgttaaaccg
     1741 gatgtcatgt gtctcgccaa gggcattaat tctggttacg ttccgctagg cgctacggtc
     1801 gtcaatcagc gcatcgccga agcctgggaa aaagatgacc ccatggcacc gattatgcac
     1861 ggctatacct atagcggaca tccgctcgct tgtgctgccg cactcgccaa tttagaaatc
     1921 gtgatcgaag aagacttgcc ggccaatgcc ggtactgtcg gcggttactt tcttgaacgt
     1981 cttaatgaac tcacgcaata tccccgcgtc ggcgacgttc gaggcgtcgg tctgatgctg
     2041 gcggtcgaat ttgtcagcga ccgcgaaacc aaggaaccca ttccggcgtt tgatccgtac
     2101 tttatagcaa ttcaggaaat ttgccggaaa gagggcgtgt gggttcgcat tcaggccaac
     2161 aaaatgattt tttcaccacc gctcgttttc gagaaaaaac atgtggataa agcactggat
     2221 gctgttcaca ccgcattgaa caaattgagc gagctgtaat acggatgcgg tgagcattat
     2281 aaatgcgacg atcaacagcg ctttcatgcc cacttcacca atgctttaac atctgctaaa
     2341 gttttgcctt cgccccgtaa tgtttgcagc gtcaaagact tatcacgttt ggcgaagcgt
     2401 ttaccttcac tgtcggtcaa aagacggtga aaacgataat cgggtgtgtc gaaatccagc
     2461 aaggcctgca gcaaacaatg cacatgagtg acgtcgcgaa gatcttcccc acgggtgatt
     2521 aaattgatcc cctgcaccgc atcatcgacg gtgacggaga gatgatagct ggtcggctcg
     2581 tctttgcggg cgagcaccac atcgccgaaa acttccggtg tcgcgcgttg cccacctcga
     2641 tctagatcaa cccaggttaa atgtttgcgc ttttgttccg ccagataaat tgctttttgc
     2701 atgttgaggc gcagcgcgta aggatcaccg gcagcaatcc gcatattgcg gtcatcttga
     2761 tagagcctcc ggcaggtgcc tggatagacg ggcccacgct tatcagctgt tgcatcgtgc
     2821 ggggcctcat ttatgcgcat gatctcggcg tgaatttctt tgcgggaaca aaaacaggga
     2881 tagatcaagc ccatctcgtc gagcttgatg agcgctgctt gatagtcggc catgtgatcc
     2941 gattggcggc gcaccggctt ctcccaggtc aatcccagcc aggcgagatc gttgagcacc
     3001 gccgcttcat atgctggaag gcagcgggtt tggtcgatgt cttcgatgcg cagtaacaac
     3061 cgcccgccac tttcttgcgc cgaacgctga gcaaacagcg ctgaataggc gtgacccaaa
     3121 tggaggtgtc cggtcgggct cggggcaaat cgcgtgacaa ttactgattt tttgctcatg
     3181 gctctattta tgttttgctt ggagcttggg tgcaatacca ctaaggtcaa ttcaataaaa
     3241 aattgatgcc tgaaagcaat ataaatgcca gaaacatctg atattccatc tcttgtcggc
     3301 ccggaatttg gcccgaccga tacctccagc gatgctcaac aattgattat tctgtgtcat
     3361 ggtttgggcg ctgatggctt tgatctgatt ggcctcgccc cctattttac cca
//
LOCUS       DASCNL010000807         1455 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001679394, whole genome shotgun sequence.
ACCESSION   DASCNL010000807 DASCNL010000000
VERSION     DASCNL010000807.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1455)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1455)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001679394"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="QF359_10640"
     CDS             complement(<1..737)
                     /locus_tag="QF359_10640"
                     /inference="COORDINATES: protein motif:HMM:NF023568.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJO87410.1"
                     /translation="MKPNYRSLILIQFTAVLTACAPQLVTPGPKITEPRLTEKAAIMA
                     DGAKLPLHRWRPSEKHGIKPKAILLALHGFNDYGLFVRTGAKYFSHHGIQTYAYDQRG
                     FGAAPHPGRWPGRRAFAVDLTTITGLLRRRHPTAPLYILGHSMGGAVVMTALTGKIPP
                     QTDGIILAAPAVWGRASMHFYQRWMLALLSHTLPWLTLTAEGLDIKPSDNIEMLRALG
                     GDPLFIKRSRVDTIWGLVNLMDDALAVS"
     gene            complement(727..>1455)
                     /locus_tag="QF359_10645"
     CDS             complement(727..>1455)
                     /locus_tag="QF359_10645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87411.1"
                     /translation="WNYDIEKEMRQARSSIGIVPQELNIDPFFTPREVLETQAGLYGV
                     PKSERQTEDILDAVRLLDKADSYARSLSGGMRRRMLVAKAMVHSPPILVLDEPTAGVD
                     VELRQQLWSYIRGLRDQGTTILLTTHYLEEAEELCDQIAIINHGRLVTSQKTDDLLRS
                     LDSKELVVTIDQALSAVPEGLVNFNVDLSNSHKLVFHVPPSEMPVEAVMDAVRQAGLS
                     IIDLTTKESDLEDIFLMMTQEHEA"
BASE COUNT          335 a          376 c          413 g          331 t
ORIGIN      
        1 gacactgcca aagcgtcatc catcagattg accagacccc agatggtatc gacccgggat
       61 cttttaatga acaaaggatc accgcctagg gcgcgcagca tctcgatgtt atcgctcggt
      121 ttaatatcta acccctcagc ggtaagggtc agccacggca gggtgtgtga caacaacgcg
      181 agcatccagc gttgataaaa atgcatgctc gcccggcccc agacagcggg ggcggccaat
      241 ataatgccgt cggtttgtgg cgggattttt ccggtgagcg ccgtcatcac aactgcaccg
      301 cccatgctgt ggccgagtat ataaagcggc gctgttggat ggcgacgacg caggaggccg
      361 gtgattgtgg tcagatcgac ggcaaaagcg cggcgtcccg gccagcgtcc gggatgtgga
      421 gcagctccaa atccacgctg atcataggca taggtttgaa tgccgtggtg ggagaaatat
      481 ttagccccgg ttctaacaaa cagcccatag tcattgaaac catgcagggc cagtaggatg
      541 gcttttggct taatgccatg tttttcgctc ggccgccagc gatgcaatgg cagcttagca
      601 ccatccgcca tgatggcggc tttttcggta aggcgaggtt cggtgatttt gggtcccggt
      661 gtgaccagtt gcggcgcgca cgccgtcaaa acggcagtga attggattag aattagagac
      721 cgataattag gcttcatgct cttgggtcat catcaggaaa atgtcttcaa gatcactttc
      781 cttggtggtg agatcgatga tgctgagccc ggcttggcgc acggcgtcca tgacggcttc
      841 cactggcatt tcactggggg gcacatgaaa gacgagttta tggctattac ttaaatcgac
      901 attgaaattc accaagccct cgggcacggc ggacaatgcc tgatcaattg tgacgacgag
      961 ctcttttgaa tccaagctgc ggaggagatc atcggttttt tggctggtta ccaggcggcc
     1021 atgattgatg atcgcgattt ggtcgcaaag ctcctcggct tcttcaagat aatgggtggt
     1081 tagcaaaatg gtcgtacctt gatcacggag cccgcgaata taagaccaaa gctgctggcg
     1141 taattcaaca tcgacgccgg cagtcggctc atcgagtacc agaataggcg gcgagtggac
     1201 cattgccttg gcaaccagca tacgccgccg catcccgccc gagagcgacc tggcgtaaga
     1261 atccgcctta tccagcaaac ggacagcatc taagatatct tcggtctggc gctcggattt
     1321 gggcacgcca tagagacccg cttgagtttc caggacttcg cgcggggtaa aaaacggatc
     1381 gatgtttagc tcttgaggca caattccgat cgacgagcgt gcttgcctca tctccttttc
     1441 gatatcgtag ttcca
//
LOCUS       DASCNL010000808         3550 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001680566, whole genome shotgun sequence.
ACCESSION   DASCNL010000808 DASCNL010000000
VERSION     DASCNL010000808.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3550)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3550)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3550
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001680566"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            437..1480
                     /locus_tag="QF359_10650"
     CDS             437..1480
                     /locus_tag="QF359_10650"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO87412.1"
                     /translation="MIKKFTVALTTSAALAGLALGGIADAKAGQNLRYATWDPPHHEM
                     RKFGVDVWVKSVGKATGGRVNVRMLTKGLGAPPAYHDFIKGGAIDVAHIIPAYTPGRF
                     LLHKVAEFPFLTNSAKARTVGYWRVYKKHFEQANEAKGMKLLTVWVHGPGLIHNAKRP
                     VNKMGELKGLKLRVSGDNISALAKSMGATPIFAPITKVHNMLSKGVIDGVFLTYEGIK
                     NFKLGKLVKFTTVPPGGLYATMFQMFMNQAKWDGISKKDQKIIEGISGEHAANYIGDA
                     WDLADRNGIKHMKENGIKIIPMPAAFTKKAKELWKPIQAEWMKKAAAKGVDGEAALAM
                     FKTEIKKIEAASK"
     gene            1499..2011
                     /locus_tag="QF359_10655"
     CDS             1499..2011
                     /locus_tag="QF359_10655"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO87413.1"
                     /translation="MTEESSYARLREQLSRALTLFASVTLFVIMWLVVIDVVSRDAFN
                     YSIVGLFEVTEILMGILVFAGVPIVTANQGHVAVTLLDGFIGPKLRLLQKYCVNLFCT
                     VILVIFAWRLWDVAGKLADYNDVTLFLKIPLAPVGYFMAVMTIISVPIQIALTFLPDR
                     DLTEVSAENI"
     gene            2024..3316
                     /locus_tag="QF359_10660"
     CDS             2024..3316
                     /locus_tag="QF359_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014752873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO87414.1"
                     /translation="MIAALISFAILIALLFLRVPVAFSMAAVGIFGFAQYVSWPGTLS
                     MVGRLAYDTAQSSELSVIPLFVLMGSFITRAGLADELYTAAHAWIGHKRGGLAMATII
                     SCGGFSAVCGSSVATAATMSKVAMPPMRRYKYADTLATGAIAAGGTLGILIPPSVIMV
                     IYGIMTSTDIGALFIAGIVPGVLGIIGYNIAISIVTRMNPEIGPPGKRTSWKERFQAL
                     SQVWGVLLLFLIVIGGIYFGLFTPTEAAGIGACGGFFFCLFRGALTLKTLFELLADSA
                     QTTAMLFFILIGALIFSNLMNETGMPETMGAWVTSLDTHPLLVIFAIMLIYVGLGAVL
                     DSIAMILLTVPLFFPIVLGLNLDPVWFGIIVVVVTEISLITPPVGMNIFVLNTMLPDI
                     STGTIFKGVTPFWMADLVRLTLLVLFPPVTLFMPSLMG"
     gene            complement(3323..>3550)
                     /locus_tag="QF359_10665"
     CDS             complement(3323..>3550)
                     /locus_tag="QF359_10665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87415.1"
                     /translation="EVDQFDHGNAWSLYFRDPEGNMLELYVETPWQVDHPFAMAFDIM
                     QSDDVIMTATYERVHDLTGVDPWKKPALEEA"
BASE COUNT          864 a          861 c          845 g          980 t
ORIGIN      
        1 taaatttcca aaagaaaaag tcatgacgct gtaaaatgtg aattactttt gctcagtagt
       61 tggccaatta tcttcttcgg gtcagcagca gacgttaact aatatacacc ggaatgtctg
      121 ctttcgaggg taaagcggac gcatttattg cttccgataa ataatctcaa atccgcctca
      181 cagaaattta gacgatcttt agctcggtca tttcaccagc tgggagatac cttcaataaa
      241 agttagactc ccccataaga tcctatatca tgagatttgc tgaatatctt tatattttga
      301 agcatgaaag tgtcatcaag agttaaaggg gaagcaggga gaaaactttc taaacaccat
      361 ctgtaattgg actatcacct cttcaattgg agacggtgca attaacgctt aaattcaaat
      421 tttgggagaa agaattatga ttaagaaatt taccgttgcg ctgactacca gcgcggcctt
      481 agctggattg gcattgggcg gcattgccga cgccaaagct ggtcaaaatc ttcgctacgc
      541 aacatgggat ccaccgcatc atgaaatgcg taaatttggc gttgatgttt gggtcaaaag
      601 tgtcggcaaa gcaaccggag gccgggtcaa tgtccgcatg ctgaccaaag gtctcggcgc
      661 accgcccgcc tatcacgatt ttattaaagg cggcgcaatt gacgtcgccc acattattcc
      721 agcctatacc ccaggccgtt ttttgcttca caaggtagcg gaattcccgt tcctgacgaa
      781 tagtgccaag gcgcggacag tcggatattg gcgggtctat aaaaagcatt ttgagcaagc
      841 caacgaagcc aaaggcatga aattattgac ggtttgggtt catggtcccg gcctgatcca
      901 taacgccaag cgaccagtca acaaaatggg tgaactcaaa ggcctcaaac ttcgagtgtc
      961 cggcgataat atcagtgctt tggcgaaatc aatgggtgcc acaccgattt ttgccccaat
     1021 caccaaagtg cataacatgc tttccaaagg cgtgattgat ggtgtgttct taacctacga
     1081 aggcatcaaa aacttcaaac tgggtaaatt ggttaaattc accaccgtac cacccggagg
     1141 tctttacgcc acaatgttcc aaatgtttat gaaccaggcc aaatgggatg gtatttccaa
     1201 aaaagatcag aagatcatcg aaggtatttc cggagagcac gctgccaact atatcggtga
     1261 tgcttgggat ttagctgacc ggaacggcat caagcatatg aaagaaaatg gtattaaaat
     1321 tattccaatg cctgctgcct ttaccaagaa agccaaagaa ctttggaaac caatccaagc
     1381 tgagtggatg aaaaaagcgg ccgccaaggg cgtcgacggc gaagccgctc tcgccatgtt
     1441 taaaactgag atcaaaaaaa tcgaagcagc cagcaaataa gtttgatata ttaaacttat
     1501 gactgaagaa agctcatacg cccggctccg cgaacagctg agtcgggcgt taactttatt
     1561 cgcttcggtg acattatttg tcatcatgtg gctggtggtc attgatgtcg tatcccgcga
     1621 cgccttcaat tattccatcg ttggcttgtt cgaggttact gagattctaa tgggcatttt
     1681 agttttcgcc ggcgtgccca ttgttaccgc caatcaaggc cacgtagccg ttactctact
     1741 cgacggcttc atcggtccca agctgcgcct acttcaaaag tattgcgtta atctcttttg
     1801 caccgtcatt ttagtcattt ttgcctggcg cctgtgggat gtcgctggca aacttgccga
     1861 ctacaatgac gttactctat ttctcaaaat tccgttggca ccggtcggtt attttatggc
     1921 cgtcatgact attataagtg taccaattca aattgccctg acctttttac ccgaccgtga
     1981 tctgacggaa gtatcagcag aaaatatata ggaagctcaa tacatgatcg ctgccctcat
     2041 tagctttgcg attttgatcg cgcttctttt tctccgcgtc ccggttgctt tttcgatggc
     2101 tgctgttggc atcttcggct tcgcccaata tgtcagctgg cccggcacgc tttcgatggt
     2161 ggggcggctg gcctatgaca cggcgcagtc ttcggaactc tcggttatcc cgttattcgt
     2221 actgatgggt agttttatca cgcgcgcagg tctggcagac gagctttata ccgctgccca
     2281 tgcctggatc ggtcacaaac gcggcggact cgccatggca actattattt cctgcggcgg
     2341 ctttagcgcg gtttgcggct cttcggttgc caccgccgcc accatgtcca aagtcgcaat
     2401 gccaccgatg cggcgttata aatatgctga tacattggcc accggcgcca ttgccgctgg
     2461 cggcacgctt ggtattttga ttccaccaag tgtgattatg gtgatctacg gaattatgac
     2521 ctcgaccgat atcggcgcct tatttattgc cggtatcgta ccgggcgtgc tcggtatcat
     2581 cggctacaac atcgccattt caatcgtcac ccgtatgaac ccggaaatcg gcccgcctgg
     2641 taaacgcacg agttggaaag aacgctttca ggcgctcagt caggtttggg gcgtgctgtt
     2701 gctgtttcta atcgtgattg gcggtattta cttcggcctg tttacgccga cagaagccgc
     2761 cggcatcggt gcttgcggcg gatttttctt ctgtctgttc cggggtgctc tcaccttgaa
     2821 gacattattt gagctactgg cggattcggc acaaacgact gcaatgctgt tctttatatt
     2881 gatcggcgcc ctcatctttt ccaatttgat gaacgagacg ggtatgccgg aaacgatggg
     2941 cgcttgggta accagcctcg atacccatcc cctgcttgtc atatttgcga tcatgctgat
     3001 ttatgttgga cttggcgcgg tgcttgacag tattgcaatg atcctgctga ccgtcccgct
     3061 gtttttccca atagttctag gactaaatct tgatccggtt tggttcggca tcattgtcgt
     3121 tgtcgtcacc gagattagtt tgattacgcc gcccgttggc atgaacatat ttgtgctcaa
     3181 taccatgctg cctgacatta gtacgggcac catttttaaa ggtgtcacac ccttctggat
     3241 ggctgatttg gtgcgattga ctttgctggt actatttccg ccggtgacat tgttcatgcc
     3301 gtcgcttatg ggatagcgct ttttaagctt cttccaatgc tggttttttc cagggatcaa
     3361 cgccggtgag atcatgcacc cgttcatagg ttgcggtcat aatgacgtca tcagactgca
     3421 taatgtcaaa agccatagca aatggatgat cgacctgcca aggggtctca acgtatagct
     3481 caagcatatt gccttccggg tcacgaaaat aaagcgacca ggcattaccg tgatcaaatt
     3541 gatcgacttc
//
LOCUS       DASCNL010000809         1224 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001681896, whole genome shotgun sequence.
ACCESSION   DASCNL010000809 DASCNL010000000
VERSION     DASCNL010000809.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1224)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1224)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001681896"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(91..>1224)
                     /gene="purH"
                     /locus_tag="QF359_10670"
     CDS             complement(91..>1224)
                     /gene="purH"
                     /locus_tag="QF359_10670"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HJO87416.1"
                     /translation="VDVEDYGRLVEEMAANGGGTTLKFRKNLAAKAYRRTAVYDAAIG
                     NWFAGVLETSHPERLVFAGDLKQELRYGENPHQAAAFYTTGDNRPGIATAQQLQGKEL
                     SFNNLNDTDAAFELVAEFKETACAIIKHANPCGVATSGTLQDAYLKALACDPESAFGG
                     IVALNQPLDGAAAEEIAKLFAEVVIAPEISAEALKILGAKKNLRVLQTGGIPDTTISD
                     QTVRTLAGGYLVQGRDAAVTEGELKVVTKRAPIDQEMADLYFAFTVCKHVKSNAIIYA
                     KDGVTVGIGAGQMSRVNSSRIATWKAEDATAAAGETESRAVGSVVASDAFFPFADGLL
                     AAAEAGVTAVIQPGGSIRDDEVIAAADEQNLAMVFTGMRHFRH"
BASE COUNT          285 a          330 c          316 g          293 t
ORIGIN      
        1 gttttcaaga cctgtttctg gcttaaaatg tgtaaaaaaa ggcgttttta gtcaaactta
       61 gtatttaagt cggaatagaa atatagctca ttaatggcgg aaatggcgca taccggtgaa
      121 gaccatggcg aggttttgct catcggcggc ggcgatgacc tcatcatctc tgatcgagcc
      181 gcccggctga ataaccgccg tgacgccggc ttcggctgcg gccagcaagc catctgcaaa
      241 ggggaagaag gcatccgaag caacaaccga tccgacggcc cggctttcgg tttcgccagc
      301 cgcagcggtg gcgtcctcgg ctttccaggt ggcgatgcgc gaagaattaa cccggctcat
      361 ttgccccgca cctataccca ccgttacgcc gtctttggca tatataatgg cgttagattt
      421 gacatgtttg cagactgtga aggcaaaata aagatcagcc atctcctgat cgatcggggc
      481 gcgtttggtc acgactttta actcaccttc ggtgacagca gcgtcgcggc cttgcactaa
      541 atagccgcca gcgagcgtac gtacggtttg gtccgaaatt gttgtgtccg gtattccacc
      601 ggtttgcagt acgcggagat ttttcttagc acccagaatt ttaagagctt ctgccgaaat
      661 ctccggcgcg ataaccactt cggcaaaaag tttggcaatc tcttcggcgg cggccccatc
      721 caaaggctgg ttcaaggcaa cgatcccgcc aaaggcgctt tccggatcac aggccaaagc
      781 tttcaaataa gcatcctgta gcgttccaga tgtcgcgacg ccgcaaggat tggcatgttt
      841 gataatcgca caagcggtct ctttaaattc tgccaccagt tcaaaggcgg cgtcggtatc
      901 gttgaggtta ttgaaactca actctttacc ttgcaattgt tgggctgtgg caatgccagg
      961 tcgattgtca ccagtggtat aaaaggctgc ggcttgatga gggttttcgc cgtagcgcaa
     1021 ctcttgcttt aaatcgccgg caaacaccag acgctcgggg tgagatgtct ccaacacgcc
     1081 ggcaaaccaa ttgccaattg ccgcatcata gacagccgtc cgccggtagg ctttggcggc
     1141 cagatttttt cgaaacttca aggtcgtgcc accaccattg gcagccattt cctcgaccag
     1201 acggccataa tcctcaacgt cgac
//
LOCUS       DASCNL010000810         1565 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001682271, whole genome shotgun sequence.
ACCESSION   DASCNL010000810 DASCNL010000000
VERSION     DASCNL010000810.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001682271"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1565
                     /locus_tag="QF359_10675"
     CDS             <1..>1565
                     /locus_tag="QF359_10675"
                     /inference="COORDINATES: protein motif:HMM:TIGR01511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HJO87417.1"
                     /translation="SIEVYFEAAAVITVSVQLGQVMELKARAETSGAIRGLLELSPKT
                     TFRVEDGKDDQEIPLEEVRVGDQLRVKPGSSIPVDGKVIRGSSSVDESMITGEAIPLF
                     KSIGDQVTGATLNQTSSLIVEAEHVGSETLLSQIVRMVGESQRSRAPVQRVADRVSGY
                     FVPAVVGTAVLTFILWSVFGPAPAFAFALVNAVAVLIIACPCALGLATPMSIMVGMGK
                     GAQLGVLIKDASALEKMEQVDTLIIDKTGTLTEGKPRLTATHPAPGFDENMLLEYAAS
                     LEQSSEHPLAAAIVAGAKEKKIDLNSVDFFQSTTGQGVRGVVKGQLVEIGNHITNFGS
                     LIDHAKTAQQSGGTVIAVAIGDNFAGLLIVTDPIKETSLEAVKILQDNGIEIIMATGD
                     ALATAQAVAIELNIKEVRAGVMPQDKNHLVKEYQEQDRIVAMAGDGINDAPALAQANV
                     GIAMGTGTEFAMESAEVTLVKGDLRGVLRARSLSKMTMRNIRQNLFFALIYNSLGVPI
                     AAGILFPFFGILL"
BASE COUNT          392 a          357 c          430 g          386 t
ORIGIN      
        1 tccattgaag tctattttga agccgctgcc gtgatcacag tatcggttca gctcggccag
       61 gtgatggagc ttaaggcccg tgccgaaacc agcggcgcta ttagaggttt gctggaatta
      121 tcgcccaaga ctactttccg ggttgaagac ggaaaagacg atcaggaaat cccgctagaa
      181 gaggtcagag ttggtgacca actgcgcgtt aaaccaggta gttcgatacc cgtagatggc
      241 aaggtgatta ggggttccag ctctgttgat gaatcgatga ttactggaga agctattcca
      301 ctttttaaaa gtattggcga ccaagtaacg ggggcaactc tcaaccaaac tagcagcttg
      361 atcgtagagg ctgaacatgt cggttccgag acattgttgt cgcaaattgt ccgcatggtc
      421 ggtgaatcgc aacgcagtcg cgcaccagtc caacgggttg ccgatcgagt gtccggttat
      481 tttgtgccgg ctgttgtcgg cacggctgtg ttgaccttta tcctgtggtc agtctttggg
      541 ccggctccgg ctttcgcctt tgccctcgtt aatgcggtcg cggtgctgat tatcgcctgc
      601 ccctgtgcgc ttggtctggc aacgccgatg tcaattatgg tgggaatggg taaaggtgcg
      661 cagcttggtg tattgatcaa agatgcatcg gcgcttgaga aaatggaaca ggttgatacg
      721 ctgatcatcg ataaaactgg tacgctgacc gagggcaagc cgaggctaac agctactcat
      781 ccggcccccg ggttcgatga aaacatgctg ctggaatatg ccgccagtct tgaacaatca
      841 agcgaacatc ctttggcggc ggcgattgtg gccggagcca aagaaaaaaa aatagactta
      901 aacagcgtcg acttttttca atcaaccacc gggcagggcg tgcgcggtgt cgttaaaggt
      961 cagctagtcg aaatcggcaa tcatataacc aactttggtt cgcttatcga tcatgctaaa
     1021 acggcgcaac aatcaggtgg tacggttatc gccgttgcaa ttggagataa ttttgccggc
     1081 ctgctgatcg tcactgatcc gattaaagaa acctctctgg aggcggtcaa aattcttcaa
     1141 gacaatggta ttgaaatcat catggcgaca ggtgacgctc tggcgacggc gcaggcggta
     1201 gccattgaat tgaacatcaa agaagtgcgc gcaggtgtca tgccgcaaga caaaaaccat
     1261 ttggtcaaag aatatcaaga gcaagaccgt atcgtggcaa tggccggaga cggtatcaat
     1321 gacgccccgg cgctggcaca agccaatgtt ggtattgcga tgggcaccgg caccgaattc
     1381 gccatggaaa gcgccgaagt cactctcgtt aaaggagatt tgcgtggcgt tttaagagct
     1441 agaagtttaa gtaaaatgac catgcgaaat atccggcaaa atctattttt tgcccttata
     1501 tacaatagtt taggcgtacc tattgctgca ggtattttgt tcccgttctt tggtattttg
     1561 ctgag
//
LOCUS       DASCNL010000811         1373 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001682968, whole genome shotgun sequence.
ACCESSION   DASCNL010000811 DASCNL010000000
VERSION     DASCNL010000811.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1373)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1373)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1373
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001682968"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /locus_tag="QF359_10680"
     CDS             <1..369
                     /locus_tag="QF359_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ornithine
                     acetyltransferase/N-acetylglutamate synthase"
                     /protein_id="HJO87418.1"
                     /translation="EIKVSGAADDTAARKIGLAIANSPLVKTAIAGEDANWGRIVMAV
                     GKSGEQANRDQLCISMGGVEIAATGQAVEGYDEAPVAEHMKGQDIYIAVDVGIGQGNA
                     TVWTCDLTHGYISINADYRT"
     gene            350..811
                     /locus_tag="QF359_10685"
     CDS             350..811
                     /locus_tag="QF359_10685"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(deoxy)nucleoside triphosphate
                     pyrophosphohydrolase"
                     /protein_id="HJO87419.1"
                     /translation="MPITGPDPSCLEAEVREARPDVPVILVAAIALIDVDGRILLSQR
                     PEGKSMAGLWEFPGGKVEDNETPEVALIRELKEELGLDISESCLAPLTFASHPYDDFH
                     LLMPLYLCRVWKGNPNAKEGQALKWVRLENFGDHPMPPADVPLVAILRDFL"
     gene            812..1373
                     /locus_tag="QF359_10690"
                     /pseudo
     CDS             812..1373
                     /locus_tag="QF359_10690"
                     /inference="COORDINATES: protein motif:HMM:NF024811.3"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
BASE COUNT          320 a          345 c          386 g          322 t
ORIGIN      
        1 gaaattaaag tatccggcgc agcggatgat acggctgccc ggaaaatcgg tctcgccatt
       61 gccaattcac ctttggtcaa aaccgcgatt gccggtgagg acgccaattg gggccggata
      121 gttatggcgg tcggcaaatc cggcgagcaa gctaatcgtg accagctctg catttcaatg
      181 ggtggcgtcg agattgctgc taccggccaa gcggtcgaag gctatgatga agcaccggtc
      241 gccgaacaca tgaaaggcca ggatatatat atcgccgttg atgtcggtat cggtcagggc
      301 aacgccacgg tttggacttg tgatttgacc catggatata tttcgatcaa tgccgattac
      361 cggacctgat cccagctgtc tcgaagcaga agtgcgagaa gcacgacccg atgtgccggt
      421 tattctcgtt gccgctatag cactgatcga tgttgatggc cggattttgc tatcgcaacg
      481 acccgaaggt aaaagcatgg cgggcctgtg ggaattcccc ggcggtaaag tcgaagataa
      541 tgagacgccc gaagttgccc tgatccgtga acttaaagaa gaacttggcc tggatatctc
      601 ggaaagctgt ctggcgccgt tgacctttgc ctcgcacccg tatgatgatt ttcatctcct
      661 gatgccgctc tatctctgcc gggtctggaa aggcaatccg aacgcaaaag agggccaggc
      721 gcttaaatgg gtgcggctcg aaaatttcgg cgaccaccca atgccacccg ctgatgtgcc
      781 gctggtcgcc atacttagag attttctcta aatgattcaa aacctactgc tcgatctcga
      841 cggcacgctc accgattcga agctcggcat tatccgttgt gttcagcatg cgctcactga
      901 acttggtcag ccgatgccgc ctaacgatga tctgttgtgg ttcattggtc cgccgctcag
      961 tgtctctttc gaacagatat tagagggcgc gggagaagat gccgaggaag ccgtaaccct
     1021 ataccgcgaa cgctttggca cggtgggtct gctggaaaac aatatctatg acggcgttaa
     1081 agaactactc gcggtgcaag cggcggacgg aaagcgtcaa tttatcgctt agaccaaacc
     1141 ccatgtctat atccagccaa tccttgaaca cttcgaactg ggccattggt ttgagcgggt
     1201 atatggttcg gagctggatg gcacgcgggc ggtcaaaacg gatttgttgc atcacatttt
     1261 tgccgagctt gatctcattc cggcggaaac cgtgatgatc ggtgatagga tgcatgatat
     1321 agatgcggcc aaagccgtcg gcgcgacgtc aatttgggtt gattatggtc acg
//
LOCUS       DASCNL010000812         1225 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001683341, whole genome shotgun sequence.
ACCESSION   DASCNL010000812 DASCNL010000000
VERSION     DASCNL010000812.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001683341"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="QF359_10695"
     CDS             <1..651
                     /locus_tag="QF359_10695"
                     /inference="COORDINATES: protein motif:HMM:NF020893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HJO87420.1"
                     /translation="RLILLAGIVAAIIWVGRNFDQLNSAALDAWLLGFGFWAPIAFIG
                     LYAIAAVVFMLGSLITLAAGALFGPVWGSLLSLLGATIGASMAFLIARYFAGDWVARK
                     TGGWLGRLIEGVESENWRFVAFVRLVPLFPFNITNYALGLTRISFVPYVITSFICMAP
                     GGVAYTWLGHAGREAFDGNTSAIQWGLLALALLAAIAFLPRLVRRLKGSGVTQLSA"
     gene            complement(654..>1225)
                     /locus_tag="QF359_10700"
     CDS             complement(654..>1225)
                     /locus_tag="QF359_10700"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO87421.1"
                     /translation="QTFTVAGTDRSITFTELAKSAKEEDLTAVGTHKTSAPTFPSGCH
                     ICEVEIDPDTGGVEVKRYIAVTDVGKSINPTQVEGQIKGGIVQALGQVLSENIAYDAD
                     TGQLLSGSYMDYAMPKAKDICFIETYDNPSSTEVNPLGVKGAGEIGTGCAVATIVNAL
                     VDALSPLGIHHIDTPATAESIWRCIQSTK"
BASE COUNT          226 a          304 c          343 g          352 t
ORIGIN      
        1 cgtctgattc tgcttgccgg tattgtggca gcaattattt gggtgggccg taattttgat
       61 cagctcaatt cagctgcgct tgatgcgtgg cttttggggt tcgggttttg ggcgccgatt
      121 gcctttatcg gtctctatgc aattgccgcg gtcgtattta tgctgggttc actgattacg
      181 cttgccgctg gcgctttgtt cggcccggtt tggggctcac tgcttagttt actgggcgca
      241 accatcgggg ccagcatggc atttctgatt gcccgctact ttgccggcga ttgggtcgcc
      301 cgcaaaactg gcggctggtt gggaagattg attgagggtg ttgaatctga aaactggcgt
      361 ttcgttgcct ttgtacggct cgtacccctg tttccattta atattaccaa ctatgcactt
      421 ggtcttactc gaatttcctt tgtgccgtat gtcatcacgt cttttatttg tatggccccc
      481 ggtggagtgg cttatacttg gctaggtcat gcaggccgcg aggcctttga tggcaacaca
      541 tcagccattc aatggggttt attggccctg gccttgctcg cagcaatcgc ctttctgcca
      601 cgtctcgtgc gccgcctgaa aggcagtggt gttactcaat tatcagcata agattacttc
      661 gttgactgaa tgcaccgcca gatagattcg gctgttgcgg gcgtatctat atggtgaatg
      721 cccagcggtg acagcgcatc gaccagtgca ttgacaatcg tcgccaccgc gcaaccggtg
      781 ccgatttcgc ccgcaccctt gacgccgagc ggattaacct cggttgaact cggattgtca
      841 taagtttcga tgaagcaaat gtctttggcc ttgggcatgg cataatccat ataggaaccc
      901 gataacaatt ggccggtatc ggcatcatat gcgatgtttt cagataagac ctgaccgagc
      961 gcttgaacaa tgccgccttt aatctggcct tcgacttggg tcgggttgat ggatttgccg
     1021 acatcggtga cggcaatgta gcgtttcacc tcgacgccac cggtatctgg atcaatctcc
     1081 acttcgcaga tgtggcagcc ggacgggaag gtaggcgcgc tagttttgtg agtgccgacg
     1141 gcggttaggt cctcttcttt ggcagatttt gccagctcgg tgaaagtgat cgaacgatcc
     1201 gttccggcga cggtaaaagt ctgat
//
LOCUS       DASCNL010000813         1047 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001686447, whole genome shotgun sequence.
ACCESSION   DASCNL010000813 DASCNL010000000
VERSION     DASCNL010000813.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001686447"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..212)
                     /locus_tag="QF359_10705"
                     /pseudo
     CDS             complement(1..212)
                     /locus_tag="QF359_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592643.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
     gene            complement(226..>1047)
                     /locus_tag="QF359_10710"
     CDS             complement(226..>1047)
                     /locus_tag="QF359_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HJO87422.1"
                     /translation="EQHAVTFAAGMATEGYKPFATIYSTFLQRAYDQVVHDVAIQKLP
                     VRFAIDRAGLVGADGATHAGSFDIAYLACLPDMVVMAAADEAELKNMVATAAHIDDRP
                     TAFRFPRSEGLGVEMPEIGVPLEIGKGRILREGTSVALLTLGGRLREALKAADELASK
                     GWSTTVADARFAKPLDQGMILRLAKEHEVLVTIEEGSIGGFAAHVMQFLANEGAFDKG
                     LKFRAMTLPDLFIDHDKLEKQYELAGLKRMDIVTTVMMALGEIGEGHEGITPASA"
BASE COUNT          235 a          307 c          265 g          240 t
ORIGIN      
        1 gatcttgagc ccgccgcgcg atacccaggg atggtcctgc cctttacttc caatggcgta
       61 ttttcagcaa tttgcgtacc cgctttatcg agccgcctag tttcgctata gacctgtcca
      121 gccatgacta aagcttgcgc ccggctgcgt gagtcagtga gcccgcgatc gaccaggagt
      181 tgatctaatc ttcgtttgga aacggcagcc atttaacagg cagccttatg cactagcggg
      241 cgtaatgcct tcgtggccct caccaatttc gcccagcgcc atcatcaccg tggtgacaat
      301 atccatgcgc ttcaagcctg ccagttcgta ttgtttttcc agcttatcgt gatcaataaa
      361 tagatccggc agcgtcatgg ctctaaattt caagcccttg tcaaaagcgc cttcattggc
      421 aaggaactgc atgacgtgag cagcaaagcc accgattgag ccctcttcaa tggtgaccag
      481 cacttcatgt tctttggcga gccgcaggat catgccctga tcaagcggtt tggcgaaacg
      541 cgcatcggcg acggttgtcg accagccctt ggaggcaagc tcatcggcag cctttaaagc
      601 ttcgcgcaga cggccaccta atgttaaaag cgcgaccgat gtgccttcac gtaaaatacg
      661 gcctttgccg atctccagtg gtacaccgat ttccggcatt tcaacaccga gcccctcact
      721 acgcggaaag cgaaacgccg taggccggtc atcgatgtgg gctgctgtcg cgaccatgtt
      781 tttaagctcg gcttcatccg ccgctgccat caccaccata tccggcaagc aggcaagata
      841 ggcaatatca aacgacccgg catgggtcgc gccatcagcc ccgaccagtc cggcccggtc
      901 tatggcaaaa cgtacgggta gtttttgaat ggcaacatca tggacgactt gatcgtaagc
      961 gcgctgcagg aaggttgaat aaattgtcgc aaaaggttta tagccttcgg tcgccatgcc
     1021 ggcggcaaag gtcaccgcat gttgctc
//
LOCUS       DASCNL010000814         1835 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001686692, whole genome shotgun sequence.
ACCESSION   DASCNL010000814 DASCNL010000000
VERSION     DASCNL010000814.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001686692"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="QF359_10715"
     CDS             <1..189
                     /locus_tag="QF359_10715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HJO87423.1"
                     /translation="EAFCRMWEYYLACSEVSFRHLDSTVFQIQMVKDRHVVPMTRNYM
                     MKEETALREATANDNRAA"
     gene            314..>1835
                     /locus_tag="QF359_10720"
     CDS             314..>1835
                     /locus_tag="QF359_10720"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019084851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HJO87424.1"
                     /translation="MATAIQNPTNVQAIQENDQSLPSFRSPPHNFEAEKALLGAIFAN
                     NNAYDRVSGYLRPEHFADPIHGNIYDATSKLIERGQIADPITLRTFFEQDGSLADVGG
                     TRYLAEIAGSMVNVINAVEYGRLIYDLHLKRHLIELGEQVVNNAYSPEVDDNAMKQIE
                     NAEQTLYDLATTGEIEGSFQNFKSSVVSAVEMAEIAHKRDGHLSGVATGMRDLDQIMG
                     GLHPSDLVILAGRPSMGKTALATNIAFNAAYDYRVETDEQGNQRVTDGAVVGFFSLEM
                     AAEQLAARILSEQAEIASEKIRRGTLSNDEFDKLVIASQQLHKLPIFIDDTPAMSVSM
                     LRTRARRLKRNEGLGLIVVDYLQLMEGTTRNDNRVQEISEITRGLKTLAKELDVPVLA
                     LSQLSRAVEQREDKRPLLSDLRESGTIEQDADVVTFIFREAYYLERAEPTQRPEESAD
                     KYAERYTHWEGRIEEVRHHAEIIIGKQRHGPTGTAKLYFDGTYTRFGDLDTQHTQFY"
BASE COUNT          459 a          491 c          454 g          431 t
ORIGIN      
        1 gaagctttct gccgcatgtg ggaatattat ctggcctgca gtgaagtttc cttccgtcat
       61 ttggattcaa ccgtctttca aattcagatg gtgaaagacc ggcacgttgt gccgatgacc
      121 cggaactaca tgatgaaaga agaaacggcg ctccgtgaag caacggccaa cgacaatcgc
      181 gccgcctgaa actttccgat aagcgcgtca agctagttta tttgcttttt ttagccactt
      241 atccccaggt tcaacagggc tgtgaatcct ttccgccttc cgttcccgct tggttcagag
      301 taatttcttg gacatggcga ctgcaattca aaatcccacc aacgtacaag cgatccagga
      361 aaacgatcag agcctgccct cttttcgttc gccgccccat aactttgaag cagagaaggc
      421 gttgctcggc gcaatttttg ccaacaacaa tgcctacgat cgcgtctccg gctatttgcg
      481 gccagaacat ttcgccgatc caattcatgg caatatctat gatgcaacgt caaagctgat
      541 tgagcgcggg cagattgccg accccatcac tttgcggacc ttttttgaac aagatgggtc
      601 gctggccgat gtcggcggca cccgatattt agccgaaatc gccggctcga tggtcaatgt
      661 catcaatgcc gtcgaatatg gccgcctaat ctacgacctc catttgaagc gccatcttat
      721 tgagcttggt gaacaggtcg tcaataacgc ctattcgcca gaagtcgacg ataatgcaat
      781 gaagcagatc gagaatgccg aacaaacgct ttatgatctc gccaccaccg gtgaaattga
      841 aggcagcttt cagaatttta aatcctctgt cgtttcggct gttgaaatgg ctgaaatcgc
      901 gcataaacgg gatggccatc tcagtggtgt cgcgacaggc atgcgcgacc ttgaccagat
      961 catgggcggt ctgcatccat cggatttagt cattctggcc ggtcggccct caatgggtaa
     1021 gaccgcgctc gcaaccaaca tcgctttcaa tgctgcctat gactatagag ttgaaaccga
     1081 tgagcaaggt aatcaaagag taaccgacgg tgcggtcgtc ggctttttct cgctggaaat
     1141 ggcggctgaa caattggcgg cgcgtatttt gtccgaacaa gctgaaatcg cgtcagaaaa
     1201 aatacggcgt ggtacgttat cgaacgatga gtttgataag ctcgttatcg cctcccaaca
     1261 gctccacaaa ttaccgatct ttatcgatga tacgccggcg atgtcggtaa gtatgctcag
     1321 aacccgggca cgacgtctca aacgcaatga aggccttgga cttattgtgg ttgattacct
     1381 ccaactgatg gaaggcacga cccgcaatga caaccgggtg caggaaatca gcgagatcac
     1441 tcgtggcctt aaaacgctcg ctaaagagct cgacgtgccg gtcctggcct tatctcagtt
     1501 atcccgtgcc gtggaacagc gggaagataa acgcccgctg ctatcagatt tgcgtgaatc
     1561 gggtacgatc gagcaagacg ctgacgtggt cacctttatt tttcgggaag cctattatct
     1621 cgaacgtgca gagccgacgc agcggcccga agaatcagcc gataaatacg ccgagcgcta
     1681 tacccattgg gaaggccgga ttgaagaggt tcgccaccat gccgaaatca tcatcggcaa
     1741 acagcgccac ggcccgaccg gcaccgccaa gctttatttc gatggcacct acacccgatt
     1801 tggcgatctt gatacccaac acactcagtt ttact
//
LOCUS       DASCNL010000815         1452 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001688678, whole genome shotgun sequence.
ACCESSION   DASCNL010000815 DASCNL010000000
VERSION     DASCNL010000815.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001688678"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="QF359_10725"
     CDS             <1..226
                     /locus_tag="QF359_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HJO87425.1"
                     /translation="IYAGCIGYFGANGDMDTCIALRTAVLKDGQLHAQAGAGIVADRD
                     LESEYQECRNKAKALIRAAEEAVIYAVGEN"
     gene            complement(270..1400)
                     /locus_tag="QF359_10730"
     CDS             complement(270..1400)
                     /locus_tag="QF359_10730"
                     /inference="COORDINATES: protein motif:HMM:NF016623.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HJO87426.1"
                     /translation="MAATDSKSLLTRLGEFAQNSVPVHVWIFFGIIIVAVIVDTTGAL
                     ALRKSINGHKKNTNVVRPIPIAVPKPENAKPILPEPDSVPAENHGEEYEEALPEQVFE
                     PQKSVPVSPPKIIKKINPVIATPELANTWRKNAVKLAELPPGPQIAIVIDDAGLDRKR
                     TAAAINLPGPLTIAFLTYASALPKQASGARKAGHEIMVHMAMEPLDKSVDPGPNVLQS
                     NIEATEILKRLTWGLDRFAGYVGINNHMGSRFTADPFGMNVVMRELKRRGLLFVDSRT
                     SGQTVGVSVALANDVPFTQRNIFLDNVPTVEAVNKQLHRMEIFAKHNGTAVAIGHPRD
                     ATIMALSQWLAVMAEKGFVLVPISTIVAKERGLSPLKLNNPK"
BASE COUNT          340 a          361 c          376 g          375 t
ORIGIN      
        1 catttatgct ggctgcatcg gctattttgg cgctaatggc gatatggata cctgcattgc
       61 tttgcgcacg gcggttttaa aagatggcca gttgcacgcc caggctggcg ctggcattgt
      121 cgctgacaga gatctcgaat ctgaatatca ggaatgccgc aataaagcta aagccctcat
      181 ccgcgccgcc gaagaagcgg ttatctatgc ggtgggggaa aactaagatt ttttattaat
      241 tgtaccaggt acatttatta caatgttaac tatttggggt tgttgagttt aagcggtgac
      301 aggccgcgtt ctttggcaac gatggtgctg atcggcacca gcacgaagcc cttctccgcc
      361 atgacagcca gccattgcga cagcgccata atcgtcgcat cgcggggatg accgatggcg
      421 accgcagtac cgttgtgttt ggcaaaaatc tccattcggt gaagttgctt attaaccgcc
      481 tcgacggtcg gcacgttatc caggaaaata ttacgctgag taaacggcac atcattagca
      541 agtgctaccg agacgccgac agtttggcca gaggtgcgcg aatcgacaaa caacaagccc
      601 cggcgtttga gctcccgcat caccacgttc ataccaaagg gatctgccgt aaagcggctg
      661 cccatgtgat tgttgatacc gacataaccg gcaaagcgat ccaatcccca ggttagacgt
      721 ttgaggattt ccgtagcttc gatattgctt tgcagcacgt tcgggcccgg atcgaccgat
      781 ttgtcaagtg gctccattgc catatgtacc ataatttcat gaccagcttt gcgtgcccca
      841 cttgcctgct ttggtaaagc gctggcatag gtcaaaaagg cgatggtcag cgggcctggt
      901 agattaatgg ctgcagcagt gcgtttccgg tcaagaccgg cgtcatcaat cacaatggcg
      961 atctgaggtc ctggtggaag ttcggcaagt ttgacggcat ttttccgcca ggtattggca
     1021 agttcgggcg tggcaataac cgggtttatt ttcttgataa ttttaggcgg cgacacgggt
     1081 actgattttt gcggctcgaa cacttgttct ggcaaagcct cttcgtactc ctcaccatga
     1141 ttctcggccg gcactgaatc aggctctggc aagatgggct tggcattttc cggttttggc
     1201 acggctattg gaatcgggcg cacaacattt gtatttttct tatgaccgtt gatcgacttt
     1261 cttaaagcta acgccccggt cgtatcgaca atgacggcaa caatgataat gccgaagaat
     1321 atccagacat gtaccggaac gctgttttgc gcaaattcgc caagccgcgt aagcaggctt
     1381 tttgaatcag tggctgccaa atcctcttct cccatttttg aagtaatgga gagaccctac
     1441 gccaaaaacc tt
//
LOCUS       DASCNL010000816         1981 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001690811, whole genome shotgun sequence.
ACCESSION   DASCNL010000816 DASCNL010000000
VERSION     DASCNL010000816.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001690811"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..841)
                     /locus_tag="QF359_10735"
     CDS             complement(<1..841)
                     /locus_tag="QF359_10735"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87427.1"
                     /translation="MIIDWQHHASPKVFFDRRGGKAGAPVMQNGKVNLRLRPEVYQID
                     MQLDYMDAAGIDMSVLSATLENHDDCSITREFYAEVMRDHPDRFACLAPCLPLHGPEA
                     LAELEHAVTELGLKGVVISPQNAGEAMDSQKMWPFYELVQKLDVPIFVHISGVPVGYD
                     ALEADWNINVTMTREFDVASNAIRLVNSGVLTKFPGLNFVIAHFGGGVSSIYERVERY
                     VDSWGDRFWEDQGGKAPFAQPYKQSFREVFDRLYFDMAGFEGGMNAVNCALTTIRPDR
                     LLFA"
     gene            complement(873..1826)
                     /gene="nrfD"
                     /locus_tag="QF359_10740"
     CDS             complement(873..1826)
                     /gene="nrfD"
                     /locus_tag="QF359_10740"
                     /inference="COORDINATES: protein motif:HMM:NF015851.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HJO87428.1"
                     /translation="MTSTNSGRYEQLIKDYQTEYRPQREWSEGRGFFLILGHFLVGVA
                     AGAWLFGLFFQDKISLLAGFVLAGLGGLAHLANLARPERFILMMLRTATSWVSRGFWG
                     LTLFLIGSVIYLPSLMFSDTFWQSDSVIADVGVVFSIAGSIIMMAYMGFVYTASKAIA
                     FWNSTLHPVLYISYALRGGAAAHLLSLAFQGEAVSGGSDILIFWIAVTVTVIVLWIFE
                     IQGALTSGEEAAVRSVHDILAGRLALYFYVGILLIGLFVPVFLMAGIIAPLSPTLFAL
                     IGLTSVAGDFFMKFSSIKAGVFSPVRLYSGNNRRATRRRKI"
BASE COUNT          553 a          558 c          470 g          400 t
ORIGIN      
        1 ttgcaaacag taagcgatct gggcggattg tggtgagcgc gcaattgacc gcgttcatgc
       61 cgccttcgaa acccgccata tcgaaataca aacgatcaaa gacttcccgg aaactttgtt
      121 tatagggttg ggcgaaaggc gctttaccgc cttgatcttc ccaaaaacga tcgccccagg
      181 aatcgacgta gcgctcaacc cgttcgtaaa tcgaggacac accaccgccg aaatgggcga
      241 taacaaaatt caaaccggga aatttggtca acacgccgct attgaccagg cggatggcgt
      301 ttgaggcgac atcgaactcc cgggtcatgg ttacattgat gttccagtcg gcttcgagcg
      361 cgtcatagcc gaccggcaca ccggaaatat gcacgaagat cggcacatcc aatttctgca
      421 ccagctcata gaacggccac attttctggg aatccattgc ctcgccggca ttttgcggtg
      481 agataaccac gccttttagg cccagttcag taacagcatg ttcaagctcg gcgagcgctt
      541 ccggaccatg cagcggcaaa catggagcca agcaggcaaa ccggtccggg tgatctcgca
      601 taacttcggc ataaaactct ctggtaatcg agcaatcatc atgattttcc aaggtcgccg
      661 acagcaccga catatcaata ccggcggcat ccatatagtc gagctgcatg tcaatttgat
      721 agacctcggg gcgtaaccgc aaattaactt tgccgttctg cataaccggc gcacccgctt
      781 tgccgccgcg gcggtcaaaa aacactttag gtgatgcgtg gtgttgccag tcgataatca
      841 tggtggggct ccagttattt gtcagatttt catcaaattt ttcggcgtcg tgtcgctctt
      901 cgattattgc cgctgtagag ccggactgga ctaaatacgc cggccttaat cgacgagaat
      961 ttcatgaaga aatcaccggc gacggaggtc aatccaatca gtgcaaacaa tgttggtgat
     1021 aggggcgcga taattccggc catcaaaaac accggcacga acagaccgat cagcaaaatg
     1081 ccaacataga aataaagcgc taagcggccc gccagaatat catgcaccga gcgcaccgcc
     1141 gcttcctcac cgctggtcaa agctccctgg atttcaaata tccacagcac aatgaccgtc
     1201 acggtaacgg caatccaaaa tatcagaatg tcagaaccac cgctgacagc ttcaccttga
     1261 aacgccagcg ataacagatg ggcggcagct ccaccgcgca aagcataaga aatatagaga
     1321 acgggatgca gggttgaatt ccaaaacgcg atcgccttgg atgcggtata cacaaacccc
     1381 atataggcca tcatgataat cgagccggca attgaaaaca ctaccccgac gtcggcaatc
     1441 accgaatcgc tttgccagaa tgtgtcactg aacatcagcg acggcagata gatcacgctg
     1501 ccgatcaaaa acagcgttag tccccaaaaa ccgcgcgaca cccaagatgt cgccgtccgc
     1561 agcatcatca aaataaacct ctccggccgc gccaaattgg ctaaatgcgc caacccgccg
     1621 agacccgcca gcacaaaacc agccaacaag gaaatcttat cctggaagaa cagaccaaac
     1681 agccaggcac cggcggcaac accgactaga aagtgcccaa ggataagaaa aaaaccccgc
     1741 ccttccgacc attcccgttg cggccggtat tcggtctgat agtccttgat taattgctca
     1801 tagcgtcctg agttcgtgga tgtcatatat tttcccttcc caatcaagcc ggcaaataat
     1861 aaacgtttgg attggtgcct ttttccgggt gcagcgggaa accgctacgc tcacggatca
     1921 gccgtgacac ttcgctattt ggattatcga ggtcaccaaa atagcgagca atggtcgggc
     1981 a
//
LOCUS       DASCNL010000817         1980 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001691210, whole genome shotgun sequence.
ACCESSION   DASCNL010000817 DASCNL010000000
VERSION     DASCNL010000817.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001691210"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(185..1180)
                     /locus_tag="QF359_10745"
     CDS             complement(185..1180)
                     /locus_tag="QF359_10745"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO87429.1"
                     /translation="MILYDFEYERPGSLKEATALLNETGGDAQLLAGGTDLMPNMRVE
                     VVTPSLLVSVSGIEPAAPEKCADGSIRIDSLTKLSDLVDAELIQNELPMLAESAHTVA
                     SNQVRVMGTLGGNLCQETRCLYYNQKHDYQFVEPCYKRGGDCCYPFPGNDRDVCWAVY
                     MSDIAPVLIALDAKLEILGPDGTREIAMADLYTGDGMNPFTLGTAEIIQAIFVPPVPE
                     RFGWGYHKTTVRGGLDFGTAIIVIVLQLAEDGETCCWAKIVYSAVGQGPLRPTTTELS
                     MEDAVLDPALIAVAASQEISPLPHHGFNKGFLRENIRVYTERTLVSAIECAQGKI"
     gene            1323..1808
                     /locus_tag="QF359_10750"
     CDS             1323..1808
                     /locus_tag="QF359_10750"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJO87430.1"
                     /translation="MIKTKTLDQLPVRSADDDLNYGKLPAYLGYQARQAQAAVWRDFP
                     RLMEKIDVTPGEFGLLTLIAANPGINQMCLARVYKLDKSTLSYATNRLVKRRLIKRRR
                     DVSDRRHYTLSLTPTGQAKLAAATAKVEEQEQIMDRMLEPGERELLLSLLKKIPLAFE
                     E"
BASE COUNT          493 a          539 c          464 g          484 t
ORIGIN      
        1 gattcacacc catccttggt gccggtaaga ccaatttttt cgcggattgc ttccagcagc
       61 ataacccggg gtttgacggt aatctcatgg gcttcgccgt taatggacat ttccaatacc
      121 cgggagcggg attttttgcc gttaaccgtc gttctgtcat ttatctgatt catccaacct
      181 gctcctaaat cttaccctgg gcgcactcga tagcgcttac cagtgtacgt tcggtataaa
      241 ccctgatgtt ttcgcgcaaa aaacctttat taaaaccatg atggggcagg ggtgatattt
      301 cctggctggc agccaccgca attagagctg ggtcgagtac ggcatcctcc atcgaaagtt
      361 cagtcgtggt tgggcgcaag gggccttggc cgaccgcgct atacacgatt ttggcccaac
      421 agcaggtctc gccgtcttct gctagttgca ggactataac gataatggcg gtgccgaagt
      481 caagcccgcc acgaacggtt gtcttgtgat agccccagcc aaaccgctct ggaaccggcg
      541 gtacgaaaat cgcctggatg atttcagcag tacccagggt aaaagggttc atgccatcgc
      601 cggtatacaa atccgccatt gctatctcac gggtaccatc aggcccaaga atttcgagtt
      661 tggcatcaag ggcgatcaat accggagcga tatccgacat atagaccgcc cagcagacgt
      721 cgcggtcatt acctggaaac gggtagcagc aatcaccgcc acgtttgtag cagggctcga
      781 cgaactgata gtcgtgtttt tgattgtaat agagacagcg cgtttcctga cacaagttgc
      841 caccgagagt gcccatcacc cgtacttgat tgctggctac cgtatgagcg gattcggcca
      901 gcatcggcag ttcattctgg atcagctcgg catcaaccag atcagataat ttggtaaggg
      961 agtcaattct aatcgagcca tcagcgcatt tttccggcgc tgccggttcg ataccgctca
     1021 cgcttaccag cagggacggc gttacaacct caacccgcat gttgggcata agatcagtac
     1081 cgccagccag caattgcgca tcaccaccgg tctcatttaa aagcgccgtc gcctccttca
     1141 gtgaacccgg ccgttcatat tcaaaatcat ataaaatcat gacacgccgc cattatcttc
     1201 ctggcactcc ttgttcaaat aaacacttac ttttattatt gatatttact atagtcacat
     1261 atagtttgat attcaaacta attttggctg ttagtaaaaa tcaaaatcgg atgcgatgtt
     1321 cgatgattaa aaccaaaacg ctcgatcaat taccggtacg ttctgccgat gatgacctta
     1381 attacggcaa actgccggcc tatctcggct atcaggcccg ccaagcgcaa gccgcagtgt
     1441 ggcgcgattt tccgcgcctg atggagaaaa tcgatgttac gcctggcgaa tttggtctgt
     1501 tgacattgat cgcagccaat cccggcatca atcaaatgtg tctggcgcgg gtctataagc
     1561 ttgataaatc aaccctatct tacgcgacta accgtctggt aaaacgccgc ttgatcaaac
     1621 gccgacgcga tgtcagtgat cggcgccatt acaccttatc gctgacgcca acgggacaag
     1681 caaagctggc cgccgccacc gcaaaggttg aggagcagga acagatcatg gaccggatgc
     1741 tcgagcccgg tgagcgggaa ctcctgctgt cattattgaa aaaaatcccc ctcgcatttg
     1801 aagaatgacg actatttcct ttctggcagg aaatcagccg tcaatctttc caaacttacc
     1861 gccaattatc gaccgaaacc gtaaatccat gccgatgttc gccggcaatc attttccagg
     1921 caccttgggt ctcgccgcct gtaacaacaa ttgagatatc ttccggctca tacatgctga
//
LOCUS       DASCNL010000818         1883 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001691452, whole genome shotgun sequence.
ACCESSION   DASCNL010000818 DASCNL010000000
VERSION     DASCNL010000818.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001691452"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1319)
                     /gene="secD"
                     /locus_tag="QF359_10755"
     CDS             complement(<1..1319)
                     /gene="secD"
                     /locus_tag="QF359_10755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HJO87431.1"
                     /translation="MAFATPNLLDRTTAESLPSWLPHEQVNLGLDLQGGSHLLLEVEV
                     NDVVRERLEGLIDGIRVALRKDRIRYTGLSQRGTSVTFMVRKSTELEKASKLAQGIES
                     KLEILAEGNRVTLNYSEQALRDIRNAAINQSIEIVRRRIDETGTREPTIQRQGQDRIL
                     VQLPGVDDPERVKRLLGRTAKMSFHLLDHKGSMSEAMQGRIPPGSMLLPVAQVNVDRS
                     QPQRYLVRKRVAVGGDRLIDAQPSFDSRTGEPVVNFRFDTLGGKKFGDVTKANVNRPF
                     AVVLDGKVITAPVIREPILGGSGQISGNFTISEAQDLALLLRAGALPAPLTILEERSV
                     GPGLGADSIAAGKIASIIGLILVVIFMVITYGVFGVFADVALLVNMVLILGGLSLLQA
                     TLTLPGIAGIVLTIGMAVDANVLVFERIREEVRAGRTPISAIDAGYSR"
     gene            complement(1394..1792)
                     /gene="yajC"
                     /locus_tag="QF359_10760"
     CDS             complement(1394..1792)
                     /gene="yajC"
                     /locus_tag="QF359_10760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HJO87432.1"
                     /translation="MFISPAYAQATGGADGGFTTLLPLVLIFVVFYFLLIRPQQKRAK
                     QHREMLGTVRRGDKIVTGGGIMGTVTKVVNDDELAVEIAEGIKIRVQRSLIASVQSKS
                     KPASGDATPAPANEAGVGGLLGKLLGGGKK"
BASE COUNT          497 a          523 c          434 g          429 t
ORIGIN      
        1 cggctatagc cggcatcgat tgccgagatc ggcgttcgtc cagcccgtac ttcttcgcgg
       61 atgcgttcga acaccagcac attggcatcc actgccatac caatggtcaa gacaataccg
      121 gcaatccccg gcaaggtcag cgtcgcttgc aagagcgaaa gaccacctaa tattagcacc
      181 atatttacca gcagggcgac atcagcaaaa acgccaaaga cgccataagt aatcaccata
      241 aagatgacga ctaagataag tccaatgatc gaggcgattt taccggcagc gatggaatca
      301 gcaccgagac ccggaccgac cgagcgttct tccaagatcg tcaatggtgc tggcagcgcg
      361 ccagcacgca acaataaggc caaatcctgt gcttccgaga tggtgaagtt accgctgatc
      421 tggccactac cgccaagaat tggctcacga atgactggtg cggtaatgac tttgccatcc
      481 agcaccacgg caaaaggccg gtttacattg gctttggtga catcaccaaa tttcttgccg
      541 cccaaggtat caaaacggaa atttacaacc ggttcgccgg tgcgactatc gaaagaaggt
      601 tgagcatcaa ttagtcgatc tcccccaacg gcaactcgtt tgcgtaccaa ataacgctgg
      661 ggctggctcc gatctacgtt cacttgagcc acaggcagca acatcgatcc cggtggaatg
      721 cgcccttgca tggcttctga catcgagccc ttgtggtcca ataaatgaaa ggacatttta
      781 gccgtccggc caagcaggcg ttttacccgc tccggatcat caacacccgg caattggaca
      841 aggatacgat cctggccctg gcgctgaatg gtaggttccc gtgtaccggt ttcatcaata
      901 cggcggcgga caatttcgat actttgattg atggcggcat ttctaatatc gcgcaatgcc
      961 tgctcgctat aatttagtgt cacccggttg ccttcggcaa gaatttctaa tttactttca
     1021 ataccttgag ccaacttact ggctttttcc aactctgttg attttcgcac cataaaagtc
     1081 acgctcgtac cacgttgact cagcccggta taacgaatgc gatctttacg taacgcgaca
     1141 cggataccat caatcagacc ctccaggcgc tcgcgcacaa catcattaac ttcaacttca
     1201 agtaaaaggt gagagccgcc ttgcagatca aggccgagat ttacctgttc gtgaggcagc
     1261 caactcggta ggctttccgc cgtcgtccta tcgagcaaat tcggggtagc aaaggccaag
     1321 cccagaatga ctatcccgag aatgatggaa atcttccatt tagagaaatg aaccatcgaa
     1381 ggtgttggct actctatttc tttccgccgc ccagcaactt gccaagcaga ccgccaacgc
     1441 ctgcttcatt ggctggggct ggagtggcgt cacctgaggc cggttttgat ttcgattgaa
     1501 cgctcgcgat caatgaacgc tgcacccgaa ttttaatgcc ttcggcaatt tcaacggcca
     1561 attcatcatc gttcactacc ttggtcactg tacccatgat accaccaccg gtgacaattt
     1621 tgtcgccacg acgaacagtg ccaagcattt cacgatgttg ttttgcgcgt ttttgctgtg
     1681 gtctgatcaa cagaaagtaa aaaaccacaa aaatcagaac cagcggcaac agtgtagtga
     1741 aaccgccgtc tgcaccgccc gtggcttgcg cataagctgg cgaaataaac atctatagct
     1801 ccctaaacaa taacgatgcg cggaatatag cccgccacgc cgtcaatgca atcgtaaagc
     1861 actgattttc acgaaaaatt gga
//
LOCUS       DASCNL010000819         3833 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001692848, whole genome shotgun sequence.
ACCESSION   DASCNL010000819 DASCNL010000000
VERSION     DASCNL010000819.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3833)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3833)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3833
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001692848"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            300..1298
                     /locus_tag="QF359_10765"
     CDS             300..1298
                     /locus_tag="QF359_10765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HJO87433.1"
                     /translation="MFSLKQKTNRRVFLGALAAVGLGVSVLGASAGAANIDKIHFLIP
                     GGAGGGWDGTARGTGEALTKSGIIASASYENMSGGGGGKAIGYLIENAKSSHGTLMVN
                     STPIVIRSLVGRFPHNFRDLTMIAGTIGDYAAIITGKNSPYKNFKDLVAAYKKNPKKV
                     SVGGGSVPGGMDHLVAAMAFQSAGADPTKVKYIPYDAGGKLNAAILSGEVAAGSTGFS
                     EAVALAKSGEMRILAVTSDQRVAAFKGAPTLKEQGYNATFVNWRGFFAAPGLPATKAN
                     AYRAAIAKMYKTPEWEAVRARNGWVNIHNPGNKFVSFLENQEKVIKNLMIKLGFLK"
     gene            1376..1861
                     /locus_tag="QF359_10770"
     CDS             1376..1861
                     /locus_tag="QF359_10770"
                     /inference="COORDINATES: protein motif:HMM:NF018979.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HJO87434.1"
                     /translation="MTLDRAISGLFLLLCLIYGYTAFVTMEANLLPFELNMTFLPNTM
                     PKWLSVLGVIIGLVVVVQTSPKAQAEIDEGEIDYRNLRQYKLAQAIFLLGLMIAYALL
                     LRPIGFIAATTLFLAGGGMILGERNYKLLLPIAIFTAFLIWYLVQELLGIFLRPWPWF
                     I"
     gene            1874..3391
                     /locus_tag="QF359_10775"
     CDS             1874..3391
                     /locus_tag="QF359_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HJO87435.1"
                     /translation="MLEGILQGLEAAISLQNLIMVVAGCLLGTFIGMLPGLGPMSIIA
                     IMIPVAIKIGDPSAALILLAGVYYGAIFGGSTSSILINAPGIAGTVATAFDGYPMARK
                     GLAGKALTIAAIASFTGGTVGAILLMGFAPALATVALLFHSAEYFALMIVGLSAIAAF
                     AGTGNVAKALMMTVLGLVLATLGESAQFNAPRFTMGIQDLQSGISFITLAMALFALPE
                     ALYLVLDPKRSNTGGAGGEIKDLRITKTEAKLIAPVIGRQSIQGFLIGVMPGAGATIA
                     SFLGYAVERNIAKGDEQAEFGKGSVKGLAAPETANNAACTGSFVPLLTLGIPGSGTTA
                     ILLGALIALNVTPGPRMMVDNPTIFWAVIISMYVGNVVLLILNLPLIPYIAKLLLVPR
                     NYLIPFILFFTMMGSYIGQNNATELLMLTSMGVAATIMRFAGFPLAPMLIGFILGQML
                     EDNFARAMNLTDGVSFMWERPMTTALLVLAIVLIFLPSIREQLAKLRRKGVADGD"
     gene            3415..>3833
                     /locus_tag="QF359_10780"
     CDS             3415..>3833
                     /locus_tag="QF359_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HJO87436.1"
                     /translation="MSLQKLIEGFQAFRKTYYESKPDFYRTLIKSGQYPDVMVIACSD
                     SRVNPSIITKAEPGDLFIVRNVANLVPPYEPNSRYHGTSAALEYAVRDLAVSHIIVLG
                     HSHCGGIRRLLEGDKAEEAREFIDGWMLIADLARGGGL"
BASE COUNT          829 a         1009 c          995 g         1000 t
ORIGIN      
        1 gaatgataaa tgcatcgcca gcaccgacgc cccagctcat atcgatccat tgatataact
       61 taataaaatg aacccggtac acttttacaa tgttaactat ttgatcggta ctgcaactcg
      121 ggcaagagtg cctttgccat cttgccctga aagtattgtc gcatcaccgc cttgttggcg
      181 ggcgatctct tgaacgattg acagccccaa cccttatcca ttagcgtcgg ctgtcttgaa
      241 agctgctccc cccaaaagac agcttttaaa cttacgtcaa tttaaacagg agagtaacaa
      301 tgttttcgct taaacaaaaa accaatcgtc gtgtgttctt gggcgcgctg gcggcagttg
      361 gcctaggtgt ttccgttctt ggtgcgtcgg ctggtgcagc aaatatcgat aaaattcact
      421 tcttgattcc aggtggtgct ggtggtggct gggacggaac cgctcgcggt accggtgaag
      481 ccttgaccaa atccggcatc attgcctcgg catcctatga aaatatgtct ggcggcggcg
      541 gcggtaaagc catcggttac ttgattgaaa acgccaaatc tagtcacggt actctgatgg
      601 tgaactccac cccgattgtg atccggtctc tggttggccg tttcccgcac aacttccgtg
      661 acctgaccat gattgctggc accattggtg attatgcggc catcatcacc ggcaagaata
      721 gtccttataa aaactttaaa gaccttgtcg cggcttacaa aaagaatccg aaaaaagtct
      781 ctgtcggcgg cggttccgtg ccgggtggca tggatcacct tgtcgcggct atggctttcc
      841 aatcagcggg tgcagacccg accaaagtta aatacattcc ttatgatgcc ggtggaaaac
      901 tcaatgctgc tatcttgtcc ggtgaagttg cagccggttc gaccggtttc tctgaagctg
      961 ttgctctagc aaaatccggc gaaatgcgca ttctcgcggt aacgtctgat cagcgggttg
     1021 ctgcgttcaa aggtgctcct actcttaaag aacagggcta taatgcaaca tttgttaact
     1081 ggcgtggttt ctttgctgct cccggattgc cggcaaccaa agccaatgcc taccgggcgg
     1141 ccatcgccaa aatgtacaaa actcctgaat gggaagctgt gcgggcgcgt aatggctggg
     1201 tgaacattca caacccaggc aacaaatttg tttcctttct cgaaaatcag gaaaaagtta
     1261 tcaagaactt gatgataaaa cttggtttct taaaatagat ttattaagcc ggagctcatt
     1321 attgagttcc ggcctatcac catcgcgcga attgtttttt tgaaggggga attccatgac
     1381 gcttgaccgt gccatttctg gattattcct cctcctctgt ctcatctatg gctacacggc
     1441 ctttgttacc atggaggcca atctcctccc attcgagctg aacatgacgt tcctgccgaa
     1501 cactatgcca aaatggctga gcgtgctggg cgtcatcatt ggtctggttg tagttgttca
     1561 aaccagccct aaagcccaag ccgaaattga tgagggtgaa attgattacc gcaatttgcg
     1621 gcagtataag ctcgcccagg caatttttct tttaggctta atgatcgctt atgccttgct
     1681 gttgcgcccc atcggtttta tcgccgcaac gaccttgttt ctggccggcg gcggtatgat
     1741 cctgggcgag cggaattata aattgctgct accgattgcg atatttaccg cctttttaat
     1801 ttggtatctg gtacaggaac tgctcggtat tttccttaga ccttggccct ggtttatttg
     1861 aggaggatgc cagatgcttg aaggaattct ccaaggcctg gaagccgcta tatcactgca
     1921 aaatctcatt atggtggtgg ccggctgttt actcggcacc tttatcggca tgctgccggg
     1981 attggggccg atgtcaatta tcgccatcat gatcccggtc gcgattaaga tcggtgatcc
     2041 gtcagctgcg cttattttat tggcaggggt ttattatggc gcaattttcg gtggttcaac
     2101 gtcgtcgatc ctgatcaatg cgccaggcat tgccggcacg gtggcgaccg cttttgacgg
     2161 ctatccgatg gcgcgtaaag gtctggctgg taaagctttg acgattgccg ccatcgcgtc
     2221 atttaccggc ggcactgttg gggcgatttt gttgatgggt tttgcgccag ctctggccac
     2281 tgtcgcgctg ctgtttcatt cggctgaata ttttgccctg atgattgtcg gcctgtcggc
     2341 gattgccgcc ttcgccggca ccggcaatgt cgccaaagcc ctgatgatga ccgtactcgg
     2401 attggttctc gcgaccttgg gggaaagtgc gcagtttaat gcaccgcgct tcaccatggg
     2461 cattcaggat ttacaaagcg gcattagttt catcaccctc gcaatggcgc tctttgcttt
     2521 acccgaagcg ctttatctgg tgctcgaccc gaaacgttcc aacaccggcg gggccggcgg
     2581 cgagatcaaa gacctgcgca tcaccaagac cgaagccaaa ttgattgcgc cagtgatcgg
     2641 ccgccaatca atccagggct ttctgatcgg cgtgatgccc ggtgctgggg ccaccatcgc
     2701 ctcattcctg ggctacgcag ttgaacgcaa tatcgccaaa ggcgatgaac aggccgagtt
     2761 cggcaagggc tcggtcaaag gcttggcagc gcctgagacc gccaacaatg ccgcctgcac
     2821 cggctccttc gtgccgttgc tgacccttgg tattcccggt tccggtacga cggcgatatt
     2881 gctcggtgcc ctgatcgcgc tcaatgtgac gcccggccca agaatgatgg tcgacaaccc
     2941 gacaatcttt tgggcagtca ttatttcgat gtatgttggc aatgtcgtgc tgttgatcct
     3001 caatttgccg ctgatcccct acatcgccaa acttctcttg gtgccacgca attatctgat
     3061 cccgttcatt ttgtttttca ccatgatggg cagctatatc ggccagaata atgcgaccga
     3121 actgttgatg ctgaccagca tgggcgttgc cgccaccatc atgcgcttcg ccggtttccc
     3181 gctagcgccg atgctgatcg gctttatttt gggccaaatg ttggaagaca acttcgcccg
     3241 ggcgatgaac ctgaccgatg gtgtcagctt tatgtgggag cgcccgatga cgacagcgtt
     3301 gctggtcctc gcaattgtgc tgatcttcct gccgtcaatc cgtgagcaac tcgccaaact
     3361 gaggcgtaaa ggggttgccg acggggacta aacccattac caacgcggct agatatgtca
     3421 ctacaaaaat taattgaagg cttccaagcc ttccgtaaaa cctattacga aagtaagccg
     3481 gatttttacc gcacgttgat caagagcgga cagtacccag atgtcatggt gattgcgtgc
     3541 tcagacagcc gggtcaaccc gtcgatcatc accaaggctg agccgggtga tctgttcatt
     3601 gtccgcaacg tcgctaattt ggtgccgcct tacgaaccta acagccgcta tcacggtacc
     3661 agcgcggcct tagaatatgc ggtgcgggat ttggcggtgt cgcacattat cgtcctcggc
     3721 cattcacact gcggcggcat tcgccgctta ttggaaggcg acaaagctga agaagcccgc
     3781 gagtttatcg acggctggat gttgattgcc gatctcgccc gcggcggggg gct
//
LOCUS       DASCNL010000820         1843 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001693060, whole genome shotgun sequence.
ACCESSION   DASCNL010000820 DASCNL010000000
VERSION     DASCNL010000820.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001693060"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            29..592
                     /locus_tag="QF359_10785"
     CDS             29..592
                     /locus_tag="QF359_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HJO87437.1"
                     /translation="MSSALDSCPALVLNADFRPLNYFPLSLWGWQDTVKAVFLDRVNV
                     VSEYDNAIHSPSWEMKLPSVISLKQYVQVSRKPAFTRFNVFLRDRFSCQYCSDPFPTQ
                     DLTFDHVVPRSRGGRTEWTNVVTACGICNLKKGNKSIKEAHMHLLKKPDQPNNHYLQK
                     VGRAFPPNYLHKSWRDFLYWDSELETS"
     gene            780..1394
                     /gene="rpsD"
                     /locus_tag="QF359_10790"
     CDS             780..1394
                     /gene="rpsD"
                     /locus_tag="QF359_10790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HJO87438.1"
                     /translation="MTKRIRSKYKIDRRLRCNLWGRPKSPFNTREYGPGLHGQRRKKP
                     SDFGLQLQAKQKLKGYYGNISEKQFRSYYKEAVRRKGDTSENLIGILERRLDAVIYRM
                     KFVPTVFSARQFVNHGHIRVNGIRVNISSYKVKEGDIIEVKEKSRDLPLVLEAISSQE
                     RDIPDYMEVDPAKCRGTYIRQPGLVDVPYPVQMEPNLVIEFYSR"
     gene            1525..1773
                     /locus_tag="QF359_10795"
     CDS             1525..1773
                     /locus_tag="QF359_10795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87439.1"
                     /translation="MPAYKLLSFDDDGAIKAGIEDDGFVFNLASEIVFHGPEFGIDGM
                     LLDTVIRRWSDFELIPTKIANSPSTRAKLLDGINYAHP"
BASE COUNT          485 a          460 c          421 g          477 t
ORIGIN      
        1 gttgaagagc atatgggaga cggaaaaagt gtccagcgca ctcgatagct gtccagcact
       61 ggtgttgaat gccgattttc ggccgctcaa ttattttccg ctgtctttgt ggggctggca
      121 agatactgtc aaagccgtct tccttgatcg cgtcaatgtt gtttccgaat atgacaacgc
      181 cattcactcg ccgtcgtggg aaatgaaact gccgagcgtt atttcgctta aacaatatgt
      241 tcaggtttcc cgcaaacccg ccttcacccg gtttaacgtc tttctgagag accgtttttc
      301 ctgccagtat tgctctgatc cgtttcctac tcaagatttg acctttgatc atgtcgtgcc
      361 gcgttcccgt ggtggccgca ccgaatggac caatgtggtc accgcctgcg gtatatgtaa
      421 tctcaaaaaa ggcaataaat cgatcaaaga agcgcacatg catctattaa aaaaacctga
      481 tcaacctaac aatcattatc tccagaaagt cgggcgcgct tttccgccta attacctgca
      541 taaaagctgg cgcgattttc tctattggga cagcgaactc gaaacttcat aagactttaa
      601 tattttacct gtatctattg acactaggga cgaaatacct atagtgcgcc gctgcattcc
      661 cgggaacgtg aatatcgctg aaatatagat attccgccct tcctgtttta gggcctaccg
      721 ggacaagaat aatcgacgga gcctatatgc ctcgtctcta acaaagaaag aaagtaacga
      781 tgacaaaacg tatccggtcg aaatataaaa tcgaccgtcg cctccgctgt aatctgtggg
      841 gccggcctaa atctccattc aacacccgtg aatacggccc gggcctgcat ggccagcgcc
      901 gcaaaaaacc atctgacttt ggtctgcaat tgcaagccaa gcagaaactc aaaggctatt
      961 acggcaatat ctccgagaaa cagttccgca gttattataa agaagcggtg cgccgtaaag
     1021 gcgatacctc ggaaaatctc attggtattc ttgagcgccg cctcgatgcg gtgatctacc
     1081 ggatgaaatt tgtgccgacc gtattttcgg cccgccaatt tgtcaatcac ggccacattc
     1141 gggttaacgg catccgcgtc aacatctcat cttacaaagt taaagaaggc gatattatcg
     1201 aagtgaaaga aaaatcacgc gatctgcccc tggtgctgga agctatttcc tcacaggaac
     1261 gggatattcc ggattacatg gaagttgatc cggcaaaatg tcgcggcacc tatatccgcc
     1321 agcctggtct ggtcgatgtg ccttatccgg tgcaaatgga accgaacctc gtgatcgaat
     1381 tttattctcg ctaatttatt tataagtttg cgagaccctg ggaagaaaaa ggccgctcat
     1441 tatttgggcg gccttttttt aatctgagtt cactttctgt ggtcagcccc aataataaac
     1501 aacacactta gggagcacac ctaaatgcca gcttacaaat tactttcctt tgacgatgac
     1561 ggcgcgatca aggccggtat cgaagacgat ggttttgtct ttaatctggc atccgaaatt
     1621 gtgtttcacg gtcctgagtt cggcattgac ggtatgttgc tggatacggt gatcagacgc
     1681 tggagtgatt ttgagctgat tcccaccaaa attgccaaca gcccatcgac ccgggcgaag
     1741 ctgctggacg gtataaacta tgcgcaccct taaacaatcc ttgggctgtc tattgcgctg
     1801 gcgacaatta ctactgccac gccggagaaa tgggcaacaa gat
//
LOCUS       DASCNL010000821         3585 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001693879, whole genome shotgun sequence.
ACCESSION   DASCNL010000821 DASCNL010000000
VERSION     DASCNL010000821.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3585)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3585)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3585
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001693879"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1014
                     /locus_tag="QF359_10800"
     CDS             <1..1014
                     /locus_tag="QF359_10800"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO87440.1"
                     /translation="NGGTIYVDGGKPAPGIIEQTVANLKDISPTIYNNVPRGFDMLLP
                     YLESDAELRESFFKNLDVIFYAAAALTQTAWERLEVLSEKATGQRVMMLSGWGSTETA
                     PDNTIVYWPIKKAGVIGLPIPGTEIKLVPNEDKLEVRVRGPNIMPGYWKQEELTKEVF
                     DEDGFYCIGDAARYEDPLDPRKGIVFDGRVSENFKLSTGTWVSVGNLRTTVVAAADNV
                     IQDAVIAGHDRDEIGILVFPNIVGCRALCPDLEAEAPLDEVIEQPSVRQALVEGLQSH
                     NINNPGSSTRIMRALIMTEPPNIDANEITDKGYMNQRAVLSRRAGMVEILFADTGGNI
                     VIE"
     gene            complement(1371..2975)
                     /locus_tag="QF359_10805"
     CDS             complement(1371..2975)
                     /locus_tag="QF359_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HJO87441.1"
                     /translation="MSQLQEFISRRRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGAV
                     KARGENRRAHSDWMKVERERGISVASSVMTYDYDGCTFNLLDTPGHEDFSEDTYRTLT
                     AVDSAVMVIDAAKGIEQQTRKLFEVCRLRDVPIVTFVNKLDREGRDPFEILDEIEQSL
                     ALDVTPASWPIGMGRDFLGCYDILNDQLVLLPKGKASGGANDDPGKIEKCEGLDDPRL
                     DELLPDYAVEKLREEVEMARGLCLEFDIEAYREGHLSPVFFGSAINNFGVRELLNGIG
                     KYAPSPRPQPTTDRTIDPEESNVSGFVFKIQANMDPKHRDRIAFFRLSSGHFKRGMKL
                     KHVRSNKMLNLHNPVLFLAQDRETAEEAYAGDIIGIPNHGNLRIGDALTEGEDLRFTG
                     IPSFAPELLQNVRPEDPMKAKHLGRALQQLAEEGAARVFKPRIGADWIVGVVGSLQFD
                     VMADRIRTEYEVPVIFESTTLYTARWIKANDAQLLKKFIDENSTTIADDHDKEPVFLA
                     RNTWHLDRAGEDFPDIQFLKTKEQFG"
     gene            complement(3051..>3585)
                     /locus_tag="QF359_10810"
     CDS             complement(3051..>3585)
                     /locus_tag="QF359_10810"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024578.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HJO87442.1"
                     /translation="REFAGSWEYMLDRAIFTVPIHPNWSGAALIRGDGRLCGLGSLWV
                     NDAEKSRKDSPGNMFVPIDLLKPIHDDLISKGIASGPQRPWLGIYTAEAMNRLFVSGV
                     IPDGPADTAAVEPGDLIVGINDQDVPSLPAMYRLLWSLGDAGVEITLNLRRDGEDIDI
                     IVTSDSRYSFMERRKNH"
BASE COUNT          928 a          836 c          909 g          912 t
ORIGIN      
        1 aatggcggga cgatctatgt cgatggtggc aaaccggctc ctggaataat cgagcaaacc
       61 gtggccaacc tcaaagatat atcaccgacc atctataaca atgtgccgcg tgggtttgat
      121 atgctgctac cctatttaga gagtgacgca gaattacgag agtctttctt caaaaatctt
      181 gacgttattt tttatgctgc agcggcgtta acgcaaactg cctgggagcg tctcgaagtg
      241 ctttcggaaa aagccacagg tcagcgggtg atgatgctct ctggctgggg gtcgaccgag
      301 acagcgccgg acaatacgat tgtttattgg ccgattaaaa aggccggtgt gatcggtctg
      361 ccgattcccg gtaccgagat taaactagtt ccaaacgaag ataagcttga ggtaagagtc
      421 cgcgggccca acattatgcc gggttactgg aagcaggagg aacttactaa ggaagttttt
      481 gatgaagatg gtttctattg tattggcgat gccgcccgct acgaagaccc actcgatcct
      541 cgcaaaggaa ttgtctttga cggcagagtt tccgaaaact ttaaattatc gactgggacc
      601 tgggtgtccg ttggcaattt gcgaacaacc gtagtcgctg ccgccgataa tgtcattcag
      661 gatgctgtca tcgctggtca tgatcgtgac gaaattggga ttttagtttt tccgaacatt
      721 gttggttgcc gggcgctctg tcccgatctg gaggcggaag cgcctctaga tgaagttatt
      781 gagcagccga gcgtgcggca ggctttggtt gaaggattgc aaagtcacaa tatcaacaat
      841 ccgggtagta gcacccggat aatgcgggcg cttattatga ccgaaccgcc taacattgat
      901 gctaatgaaa ttaccgataa aggttacatg aaccagcgtg cggttttgtc ccggcgtgct
      961 ggaatggtgg aaattttatt cgctgacacg ggcggcaata tcgttattga ataatcagaa
     1021 tgtctggaac gcattgattt aactaaatta agtgcctatt tagaactaac ggaacatttg
     1081 tcctgcctcc ctataactga aacgtttttg atataaaagc gagtttagtt atgggaggta
     1141 ataaagatac ggaagcgatt ttcagaagag gatatattga gaatattgcg ccagattgag
     1201 ctagagctgg cgagaagtgt tacagttgag acagcgatcc gaacaattgg catcagtgat
     1261 gcgacaatga taaacggaaa tttcgtcgaa attcttagca tttaagcaat gttaggcaag
     1321 ttacctaaaa gcgcaatgaa taatgttagt ttagaaataa tctagaaaat ttagccaaat
     1381 tgctctttgg tttttagaaa ctgaatatcc ggaaaatctt caccggcgcg atccaaatgc
     1441 caggtattgc gggcaagaaa aacaggttct ttgtcatggt catcggcaat agtagtacta
     1501 ttttcatcga taaatttttt aagcaactgg gcatcgttgg ctttaatcca acgggcagta
     1561 taaagcgttg ttgattcaaa aatcactgga acttcatatt cggtgcgaat gcggtcagcc
     1621 ataacgtcga attgtagcga gccgacgaca ccaacaatcc aatcggcgcc aatgcgaggt
     1681 ttgaaaaccc gggcggcacc ttcttctgcc aattgctgga gcgcgcggcc gagatgtttg
     1741 gctttcatcg ggtcttctgg tcgcacgttt tgtagcaatt caggggcaaa acttggaata
     1801 ccggtaaaac gcagatcttc gccttcggtc agtgcatcac cgatccgaag attgccgtga
     1861 ttgggaatac caataatatc accagcatag gcttcctcgg cggtttcccg gtcctgggcg
     1921 agaaataaaa ccggattgtg taagttcagc attttgttgc tgcgcacatg tttaagcttc
     1981 atgccgcgtt taaaatgtcc ggacgacagt ctgaaaaagg caatgcggtc gcgatgtttg
     2041 gggtccatat tggcttgaat cttaaagaca aaaccgctga cattggattc ttccggatcg
     2101 atggtgcggt ctgtcgtagg ctggggacgc ggcgaggggg catatttacc gatcccattt
     2161 aatagttcgc gaacaccaaa gttatttatc gcactaccaa aaaataccgg gctgagatgg
     2221 ccctctcggt atgcttcaat atcaaattcc aggcaaagac cgcgcgccat ctcgacttcc
     2281 tcacgaagct tttcaacggc gtaatcaggc agcagttcat caagcctggg atcatccaga
     2341 ccttcgcact tttcgatttt tcctggatcg tcattagcgc cgccgctcgc tttgcctttg
     2401 ggcaagagaa cgagctgatc attgagaatg tcgtagcagc cgagaaaatc ccggcccatg
     2461 ccgattggcc aactggccgg cgttacgtcg agggctaggg attgctcgat ctcatccaga
     2521 atttcgaacg gatcgcggcc ttcccggtcg agcttgttga caaaggttac gattggcaca
     2581 tctcgcaggc ggcagacctc aaagagttta cgggtttgct gctcgatgcc tttagctgca
     2641 tcgatcacca taacagccga atccacggcc gttagcgtgc ggtaggtatc ttcactgaaa
     2701 tcctcatggc cgggcgtatc cagcaaatta aaggtgcagc catcgtagtc ataggtcatc
     2761 accgatgatg ccacggaaat gccgcgctca cgctcaacct tcatccaatc cgagtgagcg
     2821 cgccggttct cgccacgcgc tttaaccgca cccgccatct gtatagcgcc accgaacaat
     2881 agcaactttt cggtcagtgt ggttttgccg gcatccgggt gggaaatgat cgcaaacgtg
     2941 cgtcgccggg atatgaactc ttgaagctga gacattgtga acgggtatca atcttatttt
     3001 tgttaatggg cggcgcagac atagccagtt ttatctgttt ttaccagaga ttaatggttt
     3061 ttacgccgtt ccataaagct gtagcggctg tccgaggtca cgatgatatc aatgtcttca
     3121 ccatcgcggc gtaaattcaa tgtaatttcc acaccggcat cacctaacga ccacagcaac
     3181 cggtacattg ctggcaaact gggaacatct tgatcattaa tgccgacgat aagatcgccg
     3241 ggttcaacag ccgccgtatc agctgggccg tcggggataa caccagagac aaataagcgg
     3301 ttcatggctt ctgccgtata tatgccaagc cagggacgct gtgggccgga ggctattcct
     3361 tttgagatca aatcgtcatg aatcggcttt aatagatcaa tcggcacgaa catattaccc
     3421 ggactgtctt ttctactttt ttcggcatca ttaacccaga gagatcccaa gccgcacaac
     3481 ctgccatcgc cgcgaataag cgctgcgcca ctccaattgg ggtggattgg cacagtaaag
     3541 attgcgcgat ccaacatata ttcccatgag ccggcaaatt cgcgg
//
LOCUS       DASCNL010000822         1551 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001694311, whole genome shotgun sequence.
ACCESSION   DASCNL010000822 DASCNL010000000
VERSION     DASCNL010000822.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001694311"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            150..1511
                     /locus_tag="QF359_10815"
     CDS             150..1511
                     /locus_tag="QF359_10815"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87443.1"
                     /translation="MSSTPAPAPISNPTPKAHFGSRLPFFYGWIVVGIAFITMAISVN
                     ARTSFSLLFPPILDEFGWARGTIAATFSIGFVVSTVLTPFIGALMDRFGPRIVLPLGG
                     VLTSIGLTTSIYATEPWHFYITLGVLVVGGSVFMSYIGHTLFVPNWFDRKRGLAVGLA
                     FSGVGVGSILLFPWMQYAIQTEGWRFSAVVIAIVILAILVPLNAIFQRHRPRDLGLEP
                     DGGKLADPAESGAAKKDSRENRIVDTEWLETEWTVAKAMRTSRFWWLAFSFVTSLYAW
                     YAVQVHQTRYLIDVGISAEVAAVALGLVGLTGIFGQIVVGALSDRIGRELAWSFSLMG
                     FLLTYACLFILREQPSEWLMYVMVGLQGFLGYGMASVFGAVPADLFSGKNYGSIFGVL
                     GAVSSAGAAIGPWATGVFFDIWGDYENAFVIAMVICAFSIAAMWIAGPRNVILTAGQA
                     RKL"
BASE COUNT          301 a          357 c          424 g          469 t
ORIGIN      
        1 gtgaaaaata gctttttcat catggcaaaa gcgtaccaga aaaaagccgt aaaaaaaata
       61 ttgatcattc ttaaaatgcc attaaagctt tgaaactgca tatttcgatt gtgtttggcg
      121 ggaccgataa aaataactag tttggcggca tgagtagtac tcctgcacct gcgcctatat
      181 ccaatccaac tcccaaagct cattttggca gtcgtttgcc gttcttctat ggctggatag
      241 tcgttggtat cgcctttatt accatggcca tctccgtcaa tgcacggacg tctttctcgt
      301 tgctgttccc gccgatcctc gatgagttcg gctgggcgcg tggcaccatc gccgcgacct
      361 tttcgatcgg ctttgtcgtc tcaaccgtgt tgacgccgtt catcggcgct ttaatggatc
      421 gttttggtcc acgcattgtc ctgcccctgg gcggcgtgtt aacgagcatt ggcttgacta
      481 cttcgattta tgccaccgag ccctggcatt tttatatcac gctaggtgtt ttggtcgtcg
      541 gcggttcggt ctttatgagt tatatcggtc atacactatt cgtacccaat tggttcgacc
      601 gtaaacgagg tttggcggtc ggactggcct tctccggcgt tggtgtcggt tcgatattgc
      661 tttttccgtg gatgcagtat gctattcaaa cggaaggctg gcgatttagc gccgtcgtca
      721 tcgccattgt tatcctcgcc atattggtgc cgcttaatgc tatttttcag cgccatcggc
      781 cgcgtgatct gggcttggag ccagatggcg gcaagctggc cgatccggcg gaaagtggtg
      841 cggcaaaaaa agacagccgt gaaaacagga ttgttgatac cgaatggctg gaaactgaat
      901 ggactgtcgc caaagccatg cggacgtcac gcttttggtg gctggcgttt tcatttgtca
      961 cgtcactata cgcctggtac gcagtacaag ttcaccaaac acgctacctg atcgacgttg
     1021 gtatttcggc tgaagttgct gccgttgcgc tggggcttgt cggcttgacc ggtatctttg
     1081 gtcagatcgt tgtcggcgcc ctgtcggatc gcattggccg cgagctggct tggagtttca
     1141 gtctgatggg ctttttattg acttatgcct gtttgtttat attgcgtgag cagccttcgg
     1201 aatggttgat gtatgtcatg gttgggttac agggattttt aggttatggc atggcgtcgg
     1261 tgtttggcgc agtaccggct gatttatttt ccggcaaaaa ctatggctcg atttttggtg
     1321 tgctcggtgc tgtaagcagt gctggtgcgg ctattggtcc ctgggcgacc ggtgtctttt
     1381 ttgatatctg gggagattat gaaaatgcat ttgtgattgc gatggtgata tgcgcatttt
     1441 ccatcgcggc gatgtggatt gccggcccgc gcaatgtcat cctcaccgcg ggtcaggctc
     1501 gcaaacttta atcgaaaacg gaaattgttc cgcttaatga ttgtccgata a
//
LOCUS       DASCNL010000823         1488 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001694653, whole genome shotgun sequence.
ACCESSION   DASCNL010000823 DASCNL010000000
VERSION     DASCNL010000823.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1488)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1488)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1488
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001694653"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1451)
                     /locus_tag="QF359_10820"
     CDS             complement(<1..1451)
                     /locus_tag="QF359_10820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HJO87444.1"
                     /translation="MDQIVEKPETLIGKSIPKPDAPDKVVGKTTYINDMVLPRMLVAK
                     IKRTDRVHAKILSVDISEAEKVPGIVAIATAENSPKGLIGVLKDNPPLKGDKVRCIRD
                     EIAGVAGETEEAVDEALKLIKVEYEDLPPVFDPEEALKDDAPQLHDDKPGNLSLTYDF
                     DHGDIKQAEKDSDIVMEEKYELHYVTHTCMGPGCVIADFDTHGKLTIYTQTQYPYNYK
                     MDLAPALDIPAGDIRVIQPPVGGAFGSKLDVYPFEPIAVYLAKKARRPVKLFFSREEE
                     FIASPTRQPARVYIKQGAKKDGTITFRDVNVYLNNGGYTSWGATIPAVMMRTMTGHYR
                     IPNVEFHSKAVYTNNPFAGSFRGYGNVQATYVTATLMDKMAENLGMNPIEFRLKNAQK
                     PGERTPQNSLLKNAALADCIKIGAEKTDFLTKHAENTAARENPARIRKGIGIATSIHN
                     AGGAKIHKSDGCGTILTMDDYGRATVITGASEIG"
BASE COUNT          335 a          389 c          364 g          400 t
ORIGIN      
        1 ccaatttcag acgcgccggt aatcacagtt gcccggccat aatcatccat cgtcaggatc
       61 gtgccgcagc catcactttt atgaatttta gcgccacccg cattgtggat cgaggtcgca
      121 atgccgatac ctttccggat gcgggctggg ttttcacgcg ccgccgtatt ttcagcatgc
      181 ttggtgagaa aatcagtttt ttcagctccg attttaatgc agtctgccaa ggctgcgttt
      241 ttaagtagac tgttttgcgg tgtccgttcg cccggttttt gggcgttttt aaggcggaat
      301 tcgattgggt tcatgcccaa attttcggcc atcttatcca tcagcgttgc cgtcacatag
      361 gtcgcctgga cattgccata gcccctgaat gaaccggcaa acgggttatt tgtgtagaca
      421 gcttttgagt gaaactcaac gtttggaatc cggtaatgac cggtcattgt ccgcatcatc
      481 accgccggaa tagtggcgcc ccacgaggtg taaccgccat tgttcaaata cacattgacg
      541 tcgcggaaag tgatggtgcc gtctttcttg gcaccctgct tgatataaac gcgggcaggc
      601 tgacgtgtcg gcgaggcaat aaattcttcc tcgcgggaga aaaacaactt taccggacgc
      661 cgggcttttt tcgccaaata aaccgcgatc ggctcaaacg gatagacatc cagtttagag
      721 ccaaaggccc cgccaaccgg cggctgaata acccgaatat caccagccgg aatatccaaa
      781 gccggcgcta aatccatttt gtagttatag ggatactggg tctgggtata gatcgtcagc
      841 ttgccgtgag tgtcgaaatc ggcgatgacg cagccgggcc ccatacaggt gtgggtgacg
      901 taatggagct catatttttc ttccatcacg atatcggagt ctttctccgc ctgtttgata
      961 tcaccgtgat caaaatcgta agtcagactg agattacccg gtttgtcatc atgcagttgc
     1021 ggcgcatcat ctttgagcgc ctcttccgga tcaaacacag gtggcagatc ttcatactcg
     1081 actttgataa gtttaagcgc ctcatcaacc gcttcttcag tttcaccagc aacaccggca
     1141 atttcatcgc gaatacaacg cactttatcg cctttgagcg gcgggttatc cttcaagaca
     1201 ccgatcaggc ctttcggtga attctccgca gtagcaatgg caacaatgcc aggcactttc
     1261 tcggcttcgc tgatatcaac gctcaaaatt ttggcatgca cccggtcggt tcgcttgatt
     1321 ttggcaacca gcatacgcgg caataccata tcgttgatat aggtggtttt gccgacgact
     1381 ttatccggtg catccggctt gggaatagat ttgccaataa gggtttcagg tttttcgacg
     1441 atctgatcca tctaatctct ccgattaact gcgcgcggct tcggcgac
//
LOCUS       DASCNL010000824         2303 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001699013, whole genome shotgun sequence.
ACCESSION   DASCNL010000824 DASCNL010000000
VERSION     DASCNL010000824.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001699013"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="QF359_10825"
     CDS             <1..523
                     /locus_tag="QF359_10825"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HJO87445.1"
                     /translation="IAFKFLEKGGQDVVICDINEEMLKVGRDRGLDRAIITGPRWVRG
                     NAEQLPLEDSSIDTYVTAFCLRNVTHLARALEEARRVLRPGGHFLCLEFSRVILPTLA
                     KLYDSYSFNVLPLIGQLVANDRHSYQYLAESIRRFPPQEDFAVMIAAAGLDQVSHQNL
                     SGGIAAIHSAWRI"
     gene            545..2083
                     /gene="ubiB"
                     /locus_tag="QF359_10830"
     CDS             545..2083
                     /gene="ubiB"
                     /locus_tag="QF359_10830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
                     /protein_id="HJO87446.1"
                     /translation="MITALKNISRLFTIARTLARYDALWLLEEAGVTSSVVTAARIIS
                     KRNVEGRPGERIARALQELGPTFIKFGQALSTRSDLLGEEVAADLSELQDHLPPFSAA
                     EARTTIEQELGAKVEEMFTEFTWEPVAAASIAQVHFAVTTENEEVAVKVLRPKVEQAF
                     AKDVALFHWVAHLVERTRPELRRLKPMEVIETFEETIRLEMDLRLEAAAAEEMAENFA
                     NDNTFRVPSVDWRRTSRRVLTLERIGGIPIDERDTLIAAGHDPDNILTRAAASLFNQV
                     FRDGFFHADQHPGNLFVGEDGEIITVDFGIMGRLDKPTRRYLGEMLMSFLNRDYRRVA
                     EVHFEAGYVPADKSVQAFTQACRSIAEPILDKPQNEISIARFLAHLFQVTETFEMETQ
                     PQLLLLQKTMLISEGVGRTLSPDANMWFLAQPLIEEWVDEYMGPETIVMETVGEVADG
                     LRRLPRIVSDMEKNAAAMAKGGLKLHPDTVRDMSGNDRSSLAASPKFYLAIILLLLVL
                     LFFV"
BASE COUNT          521 a          573 c          612 g          597 t
ORIGIN      
        1 tattgccttt aaattcttag aaaaaggcgg ccaagatgtc gtcatctgtg acattaacga
       61 ggaaatgctc aaggttggcc gtgatcgcgg cctcgaccgg gctattatta caggtccgag
      121 gtgggttcga ggaaatgccg aacaactgcc gcttgaggat tcttcgatcg atacctacgt
      181 tacggcattt tgcctcagga atgtcactca tttggcgcga gcgcttgagg aagcgcgccg
      241 ggtgctacgg ccgggcggcc attttttgtg tttggaattt agccgggtga tcctgccaac
      301 gctggcaaag ctttatgaca gctattcctt taatgttttg ccgttgatcg gtcagctggt
      361 cgctaatgac cggcactctt atcaatatct ggctgaaagc atccgccgtt ttcctcccca
      421 ggaagacttt gccgtgatga tcgctgctgc cggccttgat caagtctccc atcagaactt
      481 gtccggtggc attgccgcca ttcattcggc ctggcgtata tagttaaaga cttattaggc
      541 acgcatgatt accgcgctaa aaaatatttc ccggcttttc acgattgcgc gcaccctcgc
      601 acgttatgat gctttgtggc tgcttgaaga agcgggtgtc accagcagtg tcgtgacggc
      661 ggcccggatt atctcgaaac gcaatgtcga aggccgcccg ggtgagcgga ttgcccgggc
      721 attgcaggaa ttgggcccta ctttcatcaa attcggtcaa gcgctgtcga ctcgctcgga
      781 cctgttgggc gaagaagttg ccgccgatct atcggaactc caagatcatc tgccgccctt
      841 tagtgctgcc gaagcgcgca ccactatcga acaagaactt ggtgccaaag tcgaggaaat
      901 gttcaccgag tttacctggg agccggttgc cgcggcgtca atcgcccaag ttcatttcgc
      961 cgtcactaca gaaaatgaag aggtcgccgt caaagttttg cgccccaaag ttgaacaagc
     1021 ttttgctaag gatgtggcgc tgtttcattg ggttgcccat ctggtcgagc gtacacggcc
     1081 cgaactccgc cgccttaaac ctatggaagt cattgaaacc tttgaggaaa ccatccgcct
     1141 tgagatggat ttacggctgg aagcggcggc ggcggaagaa atggctgaaa attttgccaa
     1201 cgataatact ttccgcgtgc cgagtgtcga ttggcgccgc acatcgcgcc gagtactgac
     1261 tttggagcgt attggcggca tcccaatcga tgagcgtgat accttaattg ccgctggcca
     1321 cgaccctgac aacattttaa cccgggcggc tgcatcgctc tttaatcagg tattccggga
     1381 tggttttttt catgccgacc agcacccggg taatctcttt gtcggtgaag acggtgaaat
     1441 aattaccgtc gatttcggta ttatgggccg gctcgacaag ccaacccggc gctatctcgg
     1501 cgaaatgctg atgagttttc tcaaccggga ttaccgccgc gtcgctgaag tgcattttga
     1561 ggctggctat gtgccggcgg ataaatcggt gcaagccttc acccaggcct gccgttcgat
     1621 tgctgagccg atcctcgaca agccgcaaaa tgagatttcg attgcccggt ttttggcgca
     1681 tctttttcaa gtgactgaga catttgagat ggaaacccag ccgcaattac tgttgctgca
     1741 aaaaaccatg ctgatttccg aaggcgttgg ccgcacgttg agcccggatg ccaatatgtg
     1801 gttcctcgcc cagcctttga ttgaggaatg ggttgatgaa tatatgggtc cggagactat
     1861 tgttatggaa acggtcggtg aagttgccga cgggctgagg cgcctgccgc gcattgtttc
     1921 cgatatggag aagaatgccg ccgccatggc aaaaggaggt ctcaaactcc acccggacac
     1981 agtcagagac atgtccggca atgatcggtc cagtctggcg gcatcaccaa agttttatct
     2041 cgccatcata ctgttattgc tggttctctt gtttttcgtc tgatcaaaac tgctcgtata
     2101 ttttacgaaa aatatctgtg aaaagcttgt caactgctta aaggaccgtt atttaatacc
     2161 ttttattaat tacaccggca aaaagtaatt tgattggttt tccaaatgga aagtggaaaa
     2221 agagttttat tgatcatttc gggtggcatt gcggcctaca aaagtcagga attgatccgg
     2281 gatttgcacc gccgtgaaat tgc
//
LOCUS       DASCNL010000825         1526 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001700499, whole genome shotgun sequence.
ACCESSION   DASCNL010000825 DASCNL010000000
VERSION     DASCNL010000825.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1526)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001700499"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..706
                     /locus_tag="QF359_10835"
     CDS             <1..706
                     /locus_tag="QF359_10835"
                     /inference="COORDINATES: protein motif:HMM:NF013225.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJO87447.1"
                     /translation="IFCGIAKIDGFPVAIVGNRQGVYPDYPAYADGAYPGVGGKHYRE
                     GLIKQGEFVTLCGRDNLPMIWLQDTTGIDVGDLAEEAELLGLGQALVYSIEQTEISMM
                     CIVLRKGQAAAHYIMCGPQANNNNAFTLGTGCTEICVMHGETAAAASYARRLLKEDEA
                     GNDITPVVEKMNEMIQDYQDKSEPIYAAKKGFVDEIVQLTDLRKYIQAFTGANYQNPK
                     SITPVHQMLLPRLIKG"
     gene            834..1427
                     /locus_tag="QF359_10840"
     CDS             834..1427
                     /locus_tag="QF359_10840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HJO87448.1"
                     /translation="MERILNAQPTLSGAAWPASADSLLRKIILAVAGTALLTVSAKIQ
                     VPFYPVPMTMQTFAVLVIGMAFGWRLGAATILLYLAEGALGLPVFASTPAKGIGLAYM
                     AGPTGGYLVGFLASALAVGYLGERGWDRNLLTTLVAMILGTALIFGFGYVWLAHLIGM
                     AKAFQFGVLPFLWGAVFKIALAAAILPMCWKFLSRNS"
BASE COUNT          351 a          356 c          414 g          405 t
ORIGIN      
        1 gattttctgc ggtatcgcca agatcgatgg ttttcccgtc gccatcgtcg gcaaccgcca
       61 aggcgtctat ccagactatc ccgcctatgc tgacggcgct tatcctggcg tcggcggcaa
      121 gcactaccgt gaaggtctga tcaagcaagg cgagttcgtc actttgtgcg gccgcgacaa
      181 tttgccgatg atctggttac aggataccac tggcattgac gttggtgatc tggccgagga
      241 agcagaattg ctgggtttgg gccaagcgct ggtttattcc atcgagcaga ccgaaatttc
      301 aatgatgtgt attgtcctgc gtaaaggtca ggccgcagcc cattatatca tgtgcggtcc
      361 tcaagctaat aataacaatg cctttacgct cggcaccggc tgcaccgaga tttgcgtgat
      421 gcacggtgaa accgctgcgg ctgcatccta tgcccggcgc ttgctcaagg aagatgaagc
      481 cggcaacgat atcactccgg tggtcgaaaa aatgaacgaa atgatccagg attatcagga
      541 taaatcggaa ccgatatatg ccgccaagaa gggcttcgtc gatgaaatcg tgcaattaac
      601 tgatttgcgc aaatacattc aggccttcac cggggctaat tatcaaaacc ccaaatcgat
      661 cacgccggtt caccagatgc tgctgccgcg tttgatcaaa ggctaggaaa cctgtttcca
      721 aggtggctaa aaaaaggtac gagttaggaa aattcagata gttattgagt gatattagtc
      781 agcaacccgg ctgcggtgta actcaataca atctcacagg aaaggatata tcgatggaaa
      841 gaatcttaaa cgctcagccg actttgtcag gcgccgcgtg gccggcatcg gcagacagct
      901 tgcttcgcaa aattattttg gccgtggctg gtacggcgct gttgactgtg tcagccaaaa
      961 ttcaagtgcc attttatccg gtacccatga ccatgcaaac atttgctgtt ctcgtcattg
     1021 gtatggcatt cggctggcgg cttggtgcgg caactatttt gctttatctg gctgagggtg
     1081 cattgggtct accagtattc gccagcacgc cggcgaaagg catcggcctt gcttatatgg
     1141 ccggtccgac tggtggttat ttggttggtt ttttggcatc ggctttggcg gttggatatc
     1201 ttggcgaacg cggttgggat cgtaacttgt tgacgacatt ggtagcgatg attctcggta
     1261 cggctctgat ctttggcttt ggctatgttt ggctagccca tttaatcggt atggcgaagg
     1321 ccttccagtt tggcgttctg ccgttcttgt ggggagcagt ctttaaaata gctttggctg
     1381 cagcaatatt gccgatgtgc tggaaatttc tgtcgcgcaa tagctaacgg aaaatctttc
     1441 gaattgtttt agtgccgggt ccggcaagtg ccaacgaaac cggacctagc tcataatatg
     1501 gagtaatcac catgagtgtt gatgtc
//
LOCUS       DASCNL010000826         1345 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001701365, whole genome shotgun sequence.
ACCESSION   DASCNL010000826 DASCNL010000000
VERSION     DASCNL010000826.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001701365"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            66..1010
                     /gene="argC"
                     /locus_tag="QF359_10845"
     CDS             66..1010
                     /gene="argC"
                     /locus_tag="QF359_10845"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HJO87449.1"
                     /translation="MAKIFIDGEAGTTGLQILDRLKDRSDLELLHLGDDRRKDLEARA
                     EMLNSADISILCLPEDASRDAVGMIENENARVIDASIAYRTNADWDYGFPEFQAGQRE
                     IIAGSKRVSNPGCYACSSISIIYPLVKTGLLPPDFPVTINAVSGYSGGGKSLITVFED
                     ETSPNHTGSKFYLYGLGLAHKHTPEIQRRSGLDHAPIFVPSVGRFAQGMLISVPLQLW
                     SLDGVKPDDIQVALADHYDGQYFVTVAPMADTASMASLDPEDLNNTNMMKLYVFANEA
                     SGQAVVCAQLDNLGKGASGQAVQNLNLMLGLDETIGLL"
     gene            1159..>1345
                     /locus_tag="QF359_10850"
     CDS             1159..>1345
                     /locus_tag="QF359_10850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87450.1"
                     /translation="MLLEYSFLAIVVITCSLSIIYCAVTGISPVPSLRNSKRNMFDLL
                     PADFAGEVIDLGTGWGSL"
BASE COUNT          314 a          323 c          332 g          376 t
ORIGIN      
        1 ttttttattt tttttaacat ctaggcattg cgtttttcgc tggaaacgct gatatatgcg
       61 ccgttatggc taagatattc attgatggtg aagcagggac cacaggcctg caaattctcg
      121 accggttaaa agatcggagc gatctagaac tcttgcatct tggtgatgac cgtcgcaagg
      181 acctagaggc gcgcgccgag atgcttaaca gcgccgatat ttccatcctg tgtttgccgg
      241 aagatgcgtc ccgcgatgcc gttgggatga tcgaaaacga aaatgcccgg gtgattgatg
      301 cctcgatcgc ctaccggact aatgcagatt gggactacgg ctttccggaa tttcaagcag
      361 gtcagcgcga aattattgct ggatccaagc gggtatccaa tccaggctgt tatgcctgct
      421 cctcgatctc gatcatttat ccgctcgtta aaactggcct cttaccacca gattttcccg
      481 tgaccattaa tgcggtgtcg ggctattcgg gtggcggcaa gtcgttgatc accgtctttg
      541 aagatgaaac gtcacccaac cataccggca gcaaatttta tctttatggt ctcgggctcg
      601 ctcataaaca tacgccggaa atacaacggc ggagtggtct cgatcatgcg ccaatttttg
      661 tgccgagtgt cggccgcttt gcgcaaggaa tgttgatatc tgtgcccttg caactgtggt
      721 ctcttgatgg cgtaaaaccg gacgatattc aagtggcact ggccgatcat tatgatggcc
      781 agtattttgt cacggtggcg ccgatggccg ataccgcaag tatggccagc cttgatccgg
      841 aagatttaaa caatacgaat atgatgaagc tatatgtctt tgccaatgaa gcaagcggtc
      901 aggccgtagt ttgcgcccag ctcgacaatc ttggcaaagg cgcttccggc caagccgtgc
      961 aaaatcttaa tctcatgctg ggattagacg aaactattgg cttgctttag gcgcaaatac
     1021 cgttaaacat tttgccgtta ttaattttta aatcactctc ttaatttctg catggcatca
     1081 gctcttatta agcttttcag actaacctgc gtagcaccct cggagtaaat atttagacgc
     1141 ttcgaaaggc gatcagctat gctgttggaa tactcgttcc tggccattgt ggtcatcaca
     1201 tgctcactat ctattatcta ttgcgccgtc accggcattt ccccggtgcc gagtttgcgc
     1261 aattcgaaaa gaaacatgtt cgatctattg ccagcggatt ttgccggtga ggttattgat
     1321 ttaggcaccg gctggggctc actgg
//
LOCUS       DASCNL010000827         1075 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001702590, whole genome shotgun sequence.
ACCESSION   DASCNL010000827 DASCNL010000000
VERSION     DASCNL010000827.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001702590"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="QF359_10855"
     CDS             <1..451
                     /locus_tag="QF359_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HJO87451.1"
                     /translation="GGIVTSGLAIYDNMQYIHPAISTVCIGQAASMGSLLLAAGDKGK
                     RFALPNSRIMIHQPSGGAQGQATDIEIQAREILALRARLNEIYVNHTGQKLSVIEGAL
                     ERDTYMAPEDAQKFGIIDQVVEQRPAVDEDDEVTNGKAGDDKNRDES"
     gene            579..>1075
                     /locus_tag="QF359_10860"
     CDS             579..>1075
                     /locus_tag="QF359_10860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HJO87452.1"
                     /translation="MNKSTGSDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELC
                     MDIIREENKTHIVKSGDGVPAPKEICDVLDDYVIGQAFAKRVLSVAVHNHYKRLGSST
                     KENDVELAKSNILLVGPTGCGKTLLAQTLARILEVPFTMADATTLTEAGYVGEDVENI
                     ILKLL"
BASE COUNT          290 a          248 c          268 g          269 t
ORIGIN      
        1 cggtggtatc gtgacgtcag gtctcgcgat ctacgataat atgcaatata tccatccagc
       61 catttccaca gtatgtatcg gacaggcagc gtctatggga tcattattgc tggcggccgg
      121 tgacaaagga aagcgattcg ctcttccaaa ctcaagaatc atgatccatc agccttccgg
      181 cggtgctcaa ggtcaggcca ccgacattga aattcaggcc cgggaaattc ttgcattgcg
      241 ggctcggttg aatgaaatct atgtcaatca taccggccag aaactgtcag ttattgaggg
      301 agcgctcgaa cgggacactt atatggcgcc agaagatgcg cagaaattcg gcattattga
      361 ccaagttgtc gagcaacgcc ctgccgttga tgaagatgat gaagtaacaa atggcaaagc
      421 cggcgatgac aaaaacagag atgaaagcta agcacatgga tgcctctata tgcacgctta
      481 gttcgctagc ggccttgcct agctccgttt tttaataaac tatagttcgg cgtggcttta
      541 actttaataa aattacgatg gactaatttg gagggcctat gaacaagtcc accggcagtg
      601 attctaaaaa cactctctat tgctcgtttt gtggcaagtc gcagcatgag gtacgcaaat
      661 tgattgctgg tccgaccgta ttcatctgtg atgaatgcgt tgagctgtgt atggatatca
      721 ttcgtgagga aaataaaact cacatcgtta aatccggtga tggcgttcca gcacccaaag
      781 aaatttgcga tgtgctggac gattatgtga tcggccaagc ctttgctaaa cgtgtcctgt
      841 cggtcgcggt tcacaatcac tacaaacgtt taggcagcag caccaaagag aacgacgtcg
      901 agcttgccaa atccaacatt cttttagtcg gcccgaccgg ttgcggcaaa acgttgctag
      961 cgcagacttt ggcgcggatc cttgaagtgc ctttcacgat ggctgacgca acgaccttga
     1021 ccgaagccgg ttatgtcggt gaagatgttg aaaacatcat cctcaaattg ttgca
//
LOCUS       DASCNL010000828         5538 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001703906, whole genome shotgun sequence.
ACCESSION   DASCNL010000828 DASCNL010000000
VERSION     DASCNL010000828.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5538)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5538)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5538
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001703906"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="QF359_10865"
     CDS             complement(<1..241)
                     /locus_tag="QF359_10865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87453.1"
                     /translation="MDITKNMKVRPLKATDLDQVVDIDKRIVGWSRRGFFEKRVQAAI
                     DRPDSYVVVGTVDGTTLVGYAIDRIHGGDFGNKART"
     gene            complement(266..757)
                     /locus_tag="QF359_10870"
     CDS             complement(266..757)
                     /locus_tag="QF359_10870"
                     /inference="COORDINATES: protein motif:HMM:NF013936.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HJO87454.1"
                     /translation="MDLNTRIARQLHDEHVAVISLMDKLQEFVGKDQPDTTDTQISNF
                     LGDLKVVIEGEVTNHFKFEENDLFPILNDEGDGDMSDLLSEEHDVILPLGLELAAAIE
                     VVRSEGFTADSWQSFKQYGAEFSDRLRDHANKEEMGLVPLIDDLLEADVDANLATNYI
                     DNR"
     gene            complement(1217..2812)
                     /locus_tag="QF359_10875"
     CDS             complement(1217..2812)
                     /locus_tag="QF359_10875"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO87455.1"
                     /translation="MPDIDTDKFRLRRFIEKLDSLGEVTTIEEPVDLADLAAQIEDNE
                     KAVLFKSVGPEKFELVANVNGSRSRLAAAFEVDEADVITEFQRRLDTPQPIVDVAEGD
                     APVQKIIIEEDDVDLTKLPFYIHHEFDGSTYLSSGIDYAVDPETGTTNVGCRRLSLRD
                     AKTTGTNVTAPSDLKRIYQGCVARGEKLPISFAVGSHPIDFMAAGMRIPADEISLVST
                     LRGEPLPLVKCLTNDIRIPADAEMIIEGYFDERGYVEPDGPFGEYVGFYGPMHMDPVF
                     HVTAITMREDMLHQSLLHGSGHHIHRAESVQLLTIRQEAQIFKTLRMMGVQVIDVYVP
                     PGSAEGQNVRISIKQMRPGQARNCIAAVFGAVFGAKHVFITDEDVNIRDEHSFEWAFV
                     SRFQADRDMVIFEGMMGMPMDPSLDSKDIIGTKAGFDLTLPLQSRGKLSMRVASAPKL
                     EGAARYQTVPQALEENAPMFFSEIVDALGSRDGREIAVQLDELRADGKLMRNADGQYL
                     LGQAEKGTTGLHGPQHDDPNAHT"
     gene            complement(2841..5171)
                     /locus_tag="QF359_10880"
     CDS             complement(2841..5171)
                     /locus_tag="QF359_10880"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HJO87456.1"
                     /translation="MGQFAFGQSVARTEDPRLLTGRGNYVNDVNLHHQAHGFVLRSPH
                     PHAKILSIDTAEAKAAPGVIAVLTGADIQAAGLGVTKVNFQHKRADGSPLYSVPHPGL
                     VTDRVRFVGDYVAFIVAKTVAQAKDAAELVMVDYQPLEAITDTASAPEEGSPAVWDDC
                     PDNISCIIHQGDKDATDAAFEKADTVIKQRFVINRISANPMEMRGCVGIYDQREDRYI
                     IYNDIQAPHALRQVLSEDIFKVPQKDVQVIAGNVGGAFGMKGPTYPEIRLCAWASKRI
                     GRPVKWSCERSEAFQSDEHCRDNVSKAEMALTSDGKFLGLRVNTIVNHGAYLSQDRHL
                     LSSFLNVGCLAGVYTTPAIHVTVRNVFTNTNSTSPYRGAGRPEAAYIIESMADLAAKE
                     LGLDKTEIRRRNIIPVDAMPFKTGLIYTYDCGEFEKNMDRVMEMIDYAGFEARREEAR
                     TRSKLRGIAISNSIERAGAPFPETVEIRFDPTGTVTIFAGTKDQGQGHDTMYKQLLSD
                     KLGIDTDDVRLVDGDTDKVTYGLGTFGSRSAIIGGSALHVAADKIIEKGTKIAAQVLE
                     AAEADITFEDGQFRIAGTDRSLDVQEIAKIAYNPIRMPKGIEPGFAETGTFDLLQTTF
                     PNGCHGVEVEIDEETGKTELVSYYIVDDVGNVINPLMLKGQIYGGVVQGVGQALMEDI
                     AFDPDSGQLLSGSFMDYAMPRADDMCAMKVESNPVVTKANPLGVKGAGEAGCVGALPA
                     VISAITDALSVYGIDYIEMPATAERVWQAIQSAKAV"
     gene            complement(5216..>5538)
                     /locus_tag="QF359_10885"
     CDS             complement(5216..>5538)
                     /locus_tag="QF359_10885"
                     /inference="COORDINATES: protein motif:HMM:NF024591.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87457.1"
                     /translation="DRKKDMIVSGGENIYTSEVEAALYKHPDVFECAVIGIPDDKYGE
                     ALFAVIVTVPGETLTEDIIIEHCRELIAGYKVPRQMDFVEELPKSAMSKILKNELRDI
                     YGNK"
BASE COUNT         1371 a         1399 c         1297 g         1471 t
ORIGIN      
        1 cggttcttgc cttgttgcca aaatcaccgc catgaatccg gtcgattgcg tagccgacaa
       61 gagtcgtacc atctacggta ccgacaacaa catagctatc ggggcgatca attgctgcct
      121 ggacgcgctt ttcaaagaaa ccacgccgag accagccgac gatgcgttta tcaatatcaa
      181 ccacttgatc taagtcagtc gcttttaacg gccgaacttt catatttttt gttatatcca
      241 tggccgctta tcctgctttt tatgcttatc ggttatcaat ataattagtg gcgagattgg
      301 catctacatc tgcctcaagc aagtcatcga ttaatggtac caatcccatt tcttccttgt
      361 tggcgtgatc gcgcaagcgg tcggaaaatt cagctccata ctgtttaaag ctttgccagc
      421 tatcggccgt aaaaccttca gaacgtacaa cttcaatagc cgctgccaat tcgagaccca
      481 aggggaggat gacatcatgt tcttccgaca gtaaatccga catgtcgcca tctccttcat
      541 cgttcaggat tgggaacaga tcgttttcct caaatttaaa atggttggtt acttcgcctt
      601 cgattactac ttttaaatca ccaagaaaat ttgatatttg agtgtctgtt gtatccggtt
      661 gatccttgcc aacaaactct tgaagcttat ccatcaaact aataacggcg acatgttcgt
      721 cgtgaagttg cctggcgatg cgggtattta aatccataac ttactccaaa tcagtaatta
      781 ggtactataa taccgaaata tcctaaaagt caagggaaac cataaattaa atgtgattta
      841 agttaaggaa ttattgaatc gcggcgctta ttgattgatg gtcaatctag tgcgggagaa
      901 agaaaattat ctgacacctg tggtcaatta tttattctgc tttcgtaaag ctatagattt
      961 catctaagtt ataaaaaaca aataattttg agttaagttt accagtgggc aattggtcgc
     1021 tcagagttat catcaaatat ggcaaggtat tggtgacggt ggtttttacc atctcgctca
     1081 tatcagtttc cattgcgatc gcctatttag acacattagt tttcgatcac agtttgctac
     1141 cagctcttta tctttcgttt tttattccgg cacttatagc tccgccaaat aatccaaact
     1201 tcaccgtaaa tcccccctag gtatgcgcat tcggatcgtc atgttggggt ccgtgcagac
     1261 cagtcgtgcc tttttcggct tggcccagca gatactggcc atctgcatta cgcatgagtt
     1321 taccatcagc gcgcaattca tcgagttgaa cggcgatctc cctgccatcc cggctaccaa
     1381 gcgcatcgac tatctcggaa aaaaacatcg gagcgttttc ttctaaagcc tggggcacag
     1441 tttgatagcg agcagcccct tccagtttag gtgctgaagc aacgcgcatg gaaagtttgc
     1501 cccggctttg caggggtagg gtgagatcaa aaccggcttt ggtgccgatg atatccttgc
     1561 tgtccaatga cgggtccatc ggcatgccca tcatgccttc aaagatcacc atatcgcggt
     1621 cggcttgaaa gcgggagacg aatgcccact cgaagctgtg ttcatctctg atattgacgt
     1681 cttcatcggt gataaaaaca tgcttggcac caaacactgc tccgaaaacg gcggcgatac
     1741 aattgcgtgc ctggcctggc cgcatctgct tgatcgaaat acgtacattc tgaccttcgg
     1801 cggagcctgg tggcacataa acatcaataa cctgaacgcc catcatgcgg agggttttaa
     1861 aaatttgggc ttcctggcgg atggtcagta actgcactga ctctgcccgg tggatatggt
     1921 gacccgagcc atgcagcagg ctttgatgca gcatgtcttc ccgcatggtg atggcagtga
     1981 catggaagac cgggtccata tgcatcggcc catagaagcc gacatattcg ccaaatggtc
     2041 catcaggctc gacatagcca cgctcatcga aatagccctc gatgatcatt tccgcatcgg
     2101 cgggaatacg aatgtcattg gtgaggcatt taaccaacgg tagtggttca ccacgcaacg
     2161 tgctgaccaa ggaaatttcg tcagccggta tgcgcatgcc tgctgccata aaatcgattg
     2221 ggtgtgagcc gacagcaaaa ctaatcggca gtttttcacc acgcgcaacg cagccttgat
     2281 agatgcgttt taaatctgac ggtgccgtga cattggtgcc ggttgtcttg gcatcgcgca
     2341 ggctgagccg ccggcagccg acattggtcg taccggtttc aggatcgacc gcatagtcaa
     2401 taccggagga caaataagta ctaccgtcaa attcgtggtg aatgtaaaag ggcagtttag
     2461 taagatcaac gtcgtcctct tcaattataa ttttttgaac cggcgcatca ccctcggcca
     2521 cgtcgacgat gggctgcggt gtgtcgagac ggcgttggaa ctcagttatt acatcagctt
     2581 catcaacttc aaaggcggcg gctaagcggc tacggctgcc attgacattg gcgaccagct
     2641 cgaatttttc cgggccaact gatttaaaca gaacggcttt ttcgttgtct tcaatttgcg
     2701 cagcgaggtc ggcgagatca actggctctt ctattgtcgt gacttcaccc aggctgtcga
     2761 gcttctcaat aaaccgtcta agccggaatt tatctgtatc aatatcaggc acaatcatct
     2821 ccccatatag ttttttatta ttatacagct ttggcgcttt ggatagcttg ccaaacccgt
     2881 tccgctgtcg ccggcatttc gatgtaatcg atgccataaa ccgatagcgc atcggtaatg
     2941 gcgctaatga cagcgggcaa agcgccaaca cagcccgctt caccggcacc tttaacgcca
     3001 agcggattgg cttttgtaac tactggattg ctttcaactt tcatcgcaca catatcatcg
     3061 gcgcgtggca tagcgtaatc cataaaggag ccggataaca gctgaccaga atccggatca
     3121 aaagcgatat cttccatcag cgcttggccg acgccttgga caacgccacc ataaatctgg
     3181 cctttgagca tcaatggatt aatgacattg ccaacatcgt caacgatgta atagctaacg
     3241 agttcggttt tgcccgtttc ttcgtcgatc tcgacttcga caccatggca gccattggga
     3301 aaagttgtct gcagaagatc aaaagtaccg gtctcagcaa agccgggctc aattcctttt
     3361 ggcatgcgaa tcgggttata agcaattttg gcaatttcct gcacgtcaag tgatcggtcc
     3421 gtaccggcaa ttctaaattg accgtcttca aatgtaatat ccgcttcggc ggcttcgaga
     3481 acctgcgctg caatcttggt gcctttctcg atgattttgt cagctgccac atgcaatgcc
     3541 gaaccgccaa tgatggctga gcgggagccg aaggtaccga ggccataggt aactttatcg
     3601 gtatcgccgt cgactaaccg gacatcatcg gtatcaatgc ccaatttatc cgacaaaagc
     3661 tgcttataca tcgtgtcatg gccttgcccc tgatctttgg tgccggcaaa tatcgtcacc
     3721 gttcccgttg gatcaaagcg aatttcaacg gtttccggaa aaggtgcacc ggcccgctca
     3781 atcgaatttg agattgcaat gccacgcagc ttgctgcgtg ttctggcttc ttcgcgacgg
     3841 gcttcaaagc cggcgtaatc gatcatctcc atgacccggt ccatattctt ttcgaactcg
     3901 ccgcagtcat aggtgtagat caggccggtc ttaaatggca ttgcatcaac cggaataatg
     3961 ttgcggcgac gaatttcggt tttatccagg ccaagctctt ttgccgctaa atccgccatg
     4021 ctttcgatga tataggcggc ttccggacgt cccgctccgc gatacggcga ggtcgaattg
     4081 gtattcgtga aaacattacg aacggtgacg tgaatggcgg gcgtcgtgta gacgccagcc
     4141 aagcagccca catttaagaa agatgacagc agatggcggt cttgcgacaa ataggcaccg
     4201 tgattaacga tagtgttgac gcgcaggcct aggaacttac cgtcactggt aagcgccatt
     4261 tcggcttttg aaacattatc gcggcaatgc tcatccgact ggaaggcttc actacgttca
     4321 caactccatt tgaccggtcg gccaattcgt ttcgaagccc aggcgcaaag acgaatttcg
     4381 ggataggtag ggcctttcat gccgaaggcg ccgccaacat tgccggcgat cacctgtacg
     4441 tctttttgcg gtactttaaa aatgtcttca gacaagactt gtcgtaaggc gtggggtgct
     4501 tgaatatcgt tatagatgat atagcggtct tctcgttggt catagatacc gacgcagccc
     4561 cgcatttcca tcggattagc tgaaatccgg ttgatgacaa atcgctgttt gatcactgta
     4621 tcggcttttt caaacgctgc atccgtcgca tctttatcgc cttgatgaat aatgcaggaa
     4681 atattgtcgg ggcaatcgtc ccatacagcg ggactgcctt cttcaggtgc cgaagcagta
     4741 tcagtaattg cttcaagcgg ctggtaatcg accatgacaa gttccgccgc atccttggct
     4801 tgagccacgg ttttggcaac tataaaggcg acataatcac cgacaaaacg cacccggtcg
     4861 gtcaccaatc caggatgagg tacactgtaa agcggagagc catcggcgcg cttgtgctga
     4921 aaattgactt tggtcacgcc cagcccagcg gcttgaatat cggcaccggt taaaacggcg
     4981 atcacaccgg gtgctgcttt agcctctgct gtatctatag ataatatctt agcgtgcgga
     5041 tgaggagaac gcagcacaaa gccgtgggcc tggtgatgca agttcacatc gttaacgtag
     5101 ttaccgcgcc cagtcagcag acgcgggtct tctgttctag caacggattg cccaaatgca
     5161 aattgtccca tagactttag attctccccg tttatcgcgt cactgttctc aagcgctatt
     5221 tattgccata aatatccctg agttcatttt taagtatttt agacattgcg ctttttggca
     5281 gttcctcgac aaaatccatt tgacgcggaa ctttgtagcc cgcaataagc tcgcggcaat
     5341 gttcgataat aatatcttca gtgagagtct cgccgggtac cgtgacaatg acggcgaata
     5401 atgcttcgcc atatttgtca tccggtatac caatcaccgc acattcgaac acgtccggat
     5461 gtttataaag cgctgcctca acttcagagg tgtagatatt ttcgccgcca ctgacaatca
     5521 tgtctttctt gcgatcca
//
LOCUS       DASCNL010000829         3412 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001706145, whole genome shotgun sequence.
ACCESSION   DASCNL010000829 DASCNL010000000
VERSION     DASCNL010000829.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3412)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3412)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3412
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001706145"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(102..500)
                     /locus_tag="QF359_10890"
     CDS             complement(102..500)
                     /locus_tag="QF359_10890"
                     /inference="COORDINATES: protein motif:HMM:NF013228.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HJO87458.1"
                     /translation="MTIERINPTDVYEPNKDIYTQVIKTTGGTNVLLAGIVPFDTDKN
                     IVGIGDMKAQVQQVLRNIERALAAAEATPSDVVRINALATDVDLYIEEGAPQVIEFFG
                     NTKPTSTTYEVQRLVHPDWLIEIEATAIID"
     gene            579..1061
                     /locus_tag="QF359_10895"
     CDS             579..1061
                     /locus_tag="QF359_10895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87459.1"
                     /translation="MSKFLALFIAAIYFAPIIALTDEINMSDGIWFRCEFAHSQIPPE
                     DNCRMLDDDGFQVIKGIVHHVKITNSKEIRCRHNRVGNCFLKNHLGLRAERTEIGPIE
                     LSEKSAAVTWLGCTQNYSLTKHLNYADIVPVGELCWWTPDKHYYVERFRGPLRIVEEE
                     "
     gene            1141..2061
                     /locus_tag="QF359_10900"
     CDS             1141..2061
                     /locus_tag="QF359_10900"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO87460.1"
                     /translation="MSSIKIELGGYQPPASVHNRAAEIFGEELAKRVGDAVDYIMDGN
                     MVETKGIKAFDLPSMVEAGDLTMCYFASSYMAKRVPEVVIFDLPFVVKNREKAYAALD
                     GELGDLLKEKFLSEMGVRILGFWDNGFRHFTNGVREIRTPADCEELKMRSMSSDVHQE
                     FFRLLGFEPTFVDVADLVAKVKSGEIDAQENPLTNTYRFGIYHYHRHITLTGHFFGMV
                     LMMVNNGIFESWPADIQQAVRDSADVATVAQLGFAQAEDDEVMAALDPAENNIVELSD
                     DERQAFTEAVTPMVAKHRARLEDRLFELVE"
     gene            2447..3340
                     /locus_tag="QF359_10905"
     CDS             2447..3340
                     /locus_tag="QF359_10905"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87461.1"
                     /translation="MSITVGVIGLGPMGGNVAELLLKKQFKVVGFDLDPDRISALDEF
                     GLEAAESTTEVAEKADVLLTSLPYISSVNAVADEITKSDKPGQVVIECSTLTVQQKID
                     VAEKLKAAGRNMLDAPISATPPMLAKGMASCHIGGDKAAYEQCVSIFEGFTASNFYVG
                     EVGDGSRMKILANYLVHVHNCAAAECFTLGQKAGFDPKLIYEVIKESAGASKMFDIRG
                     KMMSESDYREGGGTMFAVYQKDASIITSYATEVKAPIDLYVSAWQKFNSAIAQGLGHL
                     DTSAVCKAIETAAGIDRKLVE"
BASE COUNT          906 a          727 c          860 g          919 t
ORIGIN      
        1 attagctgtt taaaaatatg ggcggacagt agtaaatcaa tcagctcagt gcaatgcctc
       61 tgccaaaagg ttaattactc aactgttgag taattaacct tttaatcaat gatcgcggta
      121 gcttcgattt cgatcagcca atcgggatgg accagtctct ggacctcata agtcgttgag
      181 gtcggcttgg tgttgccaaa gaactctatt acctgtggcg caccttcttc gatatagaga
      241 tcgacatcgg tcgccagcgc gttgatacgg acaacatctg aaggggttgc ctctgctgct
      301 gccaaagcgc gctcgatatt gcgcaaaact tgttgcacct gtgctttcat atcaccgatg
      361 ccaacgatat ttttatcagt gtcgaaaggt acaatgccgg ccagcagtac attcgtgccg
      421 ccggttgttt tgatgacttg agtgtaaata tctttgtttg gttcatagac gtcagttgga
      481 ttgatgcgtt cgatggtcat ttcatttatc ctttctggtt ccctatttcg gtcacaattg
      541 atttctacta tatgtataag atgaaacaaa caggcgtcat gtcgaaattt ctagctttat
      601 ttattgccgc gatttatttt gcaccaatta ttgctttgac ggatgagatt aatatgtcgg
      661 atggtatctg gtttcgctgt gagtttgccc atagccaaat tccgcctgaa gataactgcc
      721 gcatgcttga tgatgacggc tttcaagtga tcaagggtat cgttcatcat gttaaaatca
      781 ccaacagtaa agagattcgg tgccgtcata atcgggtggg aaattgtttc ctaaaaaatc
      841 atctgggatt acgcgccgag cgtacggaaa ttggaccgat agaattgtcc gagaaaagtg
      901 cggccgtgac ttggcttggt tgcacccaga attacagcct aaccaagcat ctcaactatg
      961 ccgatattgt gccggtaggc gagctttgct ggtggactcc agataaacac tattacgtcg
     1021 aacgcttcag aggaccacta agaatagttg aagaagaata attttcatac ctaatctagg
     1081 gttgatatga caggccggct gattaaatag gctgcaataa aaaacaaaat ggggtgatta
     1141 atgagttcaa taaaaattga attgggaggt taccagccgc cagcctcggt gcataaccgg
     1201 gccgccgaaa tatttggcga agagttagcc aagcgcgttg gcgatgctgt cgactacatc
     1261 atggacggca atatggtcga gaccaaaggc attaaagcgt ttgatttgcc gagcatggtc
     1321 gaggctggtg acctcactat gtgttacttt gcttcgagct atatggccaa acgggtgccg
     1381 gaagtggtga tcttcgatct gccctttgtt gtcaaaaacc gagagaaagc ttacgccgcg
     1441 cttgatggtg agctggggga tttgctcaag gaaaaatttc tgagcgagat gggggtgcgg
     1501 atattaggtt tttgggataa cggctttcgc cacttcacca acggggtgcg ggagattaga
     1561 acgccggccg actgtgaaga gctcaaaatg cgctcgatga gttcagacgt acatcaggaa
     1621 ttttttaggc tcttgggatt tgagccgacc tttgttgatg ttgctgatct cgtcgccaaa
     1681 gtaaaatctg gtgaaattga tgctcaagaa aatccgctaa ccaacaccta ccgtttcggc
     1741 atctatcatt atcaccgaca tatcacattg accggccatt ttttcggcat ggttctgatg
     1801 atggtcaata atggaatatt cgagtcttgg ccggcggata ttcaacaggc cgtgcgagac
     1861 tcggctgatg tcgcaacggt agcacagctc ggcttcgccc aggccgaaga cgatgaggtc
     1921 atggccgctc tcgacccagc ggagaacaat atcgtcgagc tcagcgatga tgaacgtcaa
     1981 gctttcactg aagcagtgac accaatggtt gccaagcacc gggctcgttt ggaggatcgc
     2041 ttgttcgaac tggtcgaata aatattaaat tgtcatttta aaagagatcg ttcgattaag
     2101 aattcttacc tgaaattcga acgcgctcgc taccaaggtt atcagcggcc gcggtaatga
     2161 gtggtgtgac gccaaaatga acgggttaga aaacgccatc gtgccaaaaa tctctgtttc
     2221 gctgttccgt gtttcataac ggggaatata cgcttaaaaa tcctcgatta ctgctgttat
     2281 ttttatgatt caagtatgcg aatactgcat agcttttaaa aataccgttt agtacccaca
     2341 aaaatgtgat gcataacagg ccttgcgcac tgccccgcaa atgctatgaa tgcccccaga
     2401 actaattgtt caatgaacaa aaatatcaaa cttcaggagg ggtaaaatga gtattacggt
     2461 tggtgttatt ggtttgggcc cgatgggcgg caacgttgcc gaacttttat tgaaaaaaca
     2521 atttaaagtt gttgggtttg atcttgatcc ggatcgtatt tcagccctgg atgaatttgg
     2581 ccttgaggcg gctgaaagta ccaccgaagt ggccgaaaag gcggatgtcc ttttaacatc
     2641 cctgccttac atcagttcag tcaatgcggt ggctgatgag attacaaaga gtgacaagcc
     2701 gggacaagtg gttattgaat gctcgacgct gaccgttcaa cagaaaatcg atgttgcgga
     2761 aaaactaaag gcggctggca ggaatatgct ggatgcgccg atcagcgcga caccgccgat
     2821 gctggccaaa ggcatggcgt cctgtcacat cggtggcgac aaggcggcct atgaacagtg
     2881 tgtatcgatt ttcgaaggat ttaccgcaag taatttttat gtcggcgaag tgggtgacgg
     2941 tagccgcatg aaaattctgg ctaattattt ggtccatgtc cacaactgcg ctgctgcgga
     3001 atgttttacc cttggtcaga aagccggctt tgatcctaag ctcatttacg aggtgattaa
     3061 agaaagtgct ggtgcttcaa aaatgttcga tatccgcggt aaaatgatgt cagaaagcga
     3121 ctaccgggaa ggcggcggca ccatgttcgc ggtctatcag aaagacgcca gcattatcac
     3181 gtcttatgcc accgaagtga aggcgccaat cgatctctat gtttcggcgt ggcagaagtt
     3241 taattcagca attgcccaag gcttgggcca tctcgatacg tctgctgtat gcaaggcgat
     3301 cgaaactgcc gccggtatcg accgcaaact ggtcgagtga tataataaag atacctggta
     3361 cctttattac actgttaact aattatcttc gacccaatag gttttgaaac tg
//
LOCUS       DASCNL010000830         4017 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001709442, whole genome shotgun sequence.
ACCESSION   DASCNL010000830 DASCNL010000000
VERSION     DASCNL010000830.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4017)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4017)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4017
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001709442"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..337
                     /locus_tag="QF359_10910"
     CDS             <1..337
                     /locus_tag="QF359_10910"
                     /inference="COORDINATES: protein motif:HMM:NF019322.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UTRA domain-containing protein"
                     /protein_id="HJO87462.1"
                     /translation="FRRIRFFNNVPIIVETISLPLEHFPGFGTDVEPPNNLFRFYQSA
                     YGVTVAKAEEHLKAVRASAEETDLLGIADGAPLLEIDRIAKMLDSRPVEWRVSHCDTS
                     NYRYVAERG"
     gene            494..1411
                     /locus_tag="QF359_10915"
     CDS             494..1411
                     /locus_tag="QF359_10915"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87463.1"
                     /translation="MSKKIGYIGLGVLGSAMVPNLIKSGFEVIGYDVRPEVLEELGKL
                     GMTVACSPKDTAERSDVVITCLPTIKVLLDVFGGDDGIDKADKADQIVIETSTFPVDA
                     KEKAKAFMEAAGKRMLDCPVSGNRILAVKKQLTAFGSGDEAAYREVEDIIQGFASRTF
                     YIGEFGSGMKMKFCANILNLVHNSVAAEVMVLGMKSGLDPEIIHSVISGSGSSSSIFE
                     TRGAMMANNNYDHEGMNFSIPIKDSRFISDHAHQMRVPTPIYHVALQSYYAAVAQGHF
                     DEDAAAVCAAMERAANFERPKNEKKNNEF"
     gene            1401..2312
                     /locus_tag="QF359_10920"
     CDS             1401..2312
                     /locus_tag="QF359_10920"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87464.1"
                     /translation="MSSRPKKIGVIGLGNMGRGIAKNMIKAGNDVFVWDIKEPARKSY
                     TKSATIVEPQEMSQKCAMIIFVVPGSPEIDAMMKGKNSMLAEPKRGLVLYDFTTSDPV
                     YTKKLARRAVKKGVAYMDAGMTGGGAQGAEKGTMTLMIGGDKRVFKRTSPMLAPVAKK
                     LIYLGESGTGHTMKVVHNMITHANFFALSEAAHLGRRAGIDLADLIEVFNNGNARSFI
                     SERRFPDHILSGTWDGRSRVYNLNKDVGMAIALADKLGATVNIGRNTYAYIQEAVKQG
                     RAEDDFTRLYPDLEKLDWKKKKKRKQK"
     gene            complement(2448..3365)
                     /gene="dctP"
                     /locus_tag="QF359_10925"
     CDS             complement(2448..3365)
                     /gene="dctP"
                     /locus_tag="QF359_10925"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HJO87465.1"
                     /translation="MNGTFGNGGAIFFFWACSLQKNNSRKEGITDLSFRFGGYQNPTS
                     IHTRSGAALGDALKARLGDDFNYVLDNDITKFGYCTGDLITLTESGELKFCYISTNYF
                     SSDVPLVSVLDLTFTFNDRDQAYAKLDGELGNRVRAAIEGVHPDIKILHFWDNSFRHF
                     TNRVRPIRKPKDCEGIRTRTLPSEFHGHIYRRLGFDPAAQNIKDFITEIEISEFDGHD
                     NPLTNIYHFNVHKYHRYITLTGHILSVCGLYVNLTLYEGWPDDVREAVDAAALEATNI
                     QRALAIEEDIEQLKKFDPAENEIIRLTGA"
     gene            complement(3388..>4017)
                     /locus_tag="QF359_10930"
     CDS             complement(3388..>4017)
                     /locus_tag="QF359_10930"
                     /inference="COORDINATES: protein motif:HMM:NF015366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HJO87466.1"
                     /translation="TDKDFITVGKLNSGNFSVIVHGNSPYKTWGQLVAFAKKNPGKLK
                     FAHSGNWGATHAPALQLFTEAGIAKSIVMVPYKGGGPSMRGFLAREADFTMQFKSTIL
                     GQKGKVRVLISAGTKTAFKGVPTFKDLGYTSDIGLMHRVIMAPRKIPADRLAKLRGAL
                     LKVQKDKTYKKLIKAIGEITDYVDGVAYEKQRPAQSAAYKDMIKGLMKK"
BASE COUNT         1035 a          982 c         1009 g          991 t
ORIGIN      
        1 gtttaggcgt attcggtttt ttaataatgt accaattatc gtcgaaacca tctcattacc
       61 gcttgaacat tttcccggtt tcggcactga tgtcgagcca cccaataatc ttttccggtt
      121 ctatcaatca gcttatggcg tcaccgtcgc taaggccgaa gagcatttga aagcggttag
      181 ggcgtccgcc gaagagactg acctgctcgg cattgctgat ggtgcgccct tgctggaaat
      241 tgaccgtatt gccaaaatgc ttgatagccg gccggtcgag tggcgggtca gtcattgcga
      301 tactagtaat taccgctacg ttgctgagcg cgggtaggag atatttttac taactcttct
      361 ccatcatatt tagttggtca ttcccgcgaa agcgggaacc cagaaggcta cattccagac
      421 ctatgcaaaa aataactaga ttccggatca agtccggggt gacgcctaga ttggagtgaa
      481 aggagaaaat tgaatgagca agaaaatcgg ctatatcggc ctcggtgtct tgggctccgc
      541 tatggtgcca aatttaatta agagcggttt tgaggttatc ggctatgatg tccgcccaga
      601 agtcctggaa gaacttggta aactgggcat gactgtagca tgttcaccta aggatacggc
      661 ggaacgctcg gatgtcgtta ttacctgtct gccaaccatc aaggtactgc tggatgtttt
      721 cggcggcgat gacggaattg ataaagccga caaagctgat caaattgtta tcgaaaccag
      781 cactttcccg gtcgatgcca aggaaaaagc caaggccttc atggaagcgg caggtaagcg
      841 catgctcgac tgtccggtca gcggcaatcg tatcctggct gtcaaaaaac aactgacggc
      901 atttggcagc ggcgatgagg ctgcctatcg tgaggttgaa gatatcatcc aaggctttgc
      961 cagccggaca ttttatatcg gcgaatttgg cagcggaatg aagatgaagt tctgcgccaa
     1021 tattctcaat ctcgtccata acagcgttgc tgcagaggtg atggtgctcg gcatgaaatc
     1081 cggcctcgac ccggaaatta tccatagcgt catcagtggt tcgggctcaa gctcatcaat
     1141 atttgaaacc aggggtgcaa tgatggccaa caataattat gatcacgaag gtatgaattt
     1201 ctcaataccg atcaaggatt cccgttttat ctccgatcat gctcatcaaa tgcgcgtacc
     1261 gaccccgatc tatcacgtcg ccttgcaaag ctattatgct gccgtcgcgc aaggtcattt
     1321 cgatgaagat gcggcggctg tctgtgcggc gatggaacgc gccgccaatt tcgaacggcc
     1381 aaaaaacgag aaaaagaata atgagttcta gaccgaaaaa aataggtgtc attggcctcg
     1441 gtaatatggg ccgggggatt gccaaaaata tgatcaaggc aggcaatgat gtctttgttt
     1501 gggatataaa ggagcccgcc cgcaagtctt atacaaagtc cgcaaccatc gttgagccac
     1561 aggaaatgtc acagaaatgc gccatgatca tctttgtcgt accgggttca cccgagatcg
     1621 acgcgatgat gaaaggcaaa aacagcatgc tcgccgagcc caaacgcggg ttggtgcttt
     1681 atgatttcac cacctctgat ccggtttaca ccaaaaagct ggcccgccgg gcggtcaaga
     1741 aaggcgtcgc ctatatggat gctggcatga ccggcggcgg cgcgcaaggg gcggaaaaag
     1801 gcaccatgac gctgatgatc ggcggtgata agcgcgtttt taaacgcacc tcaccgatgc
     1861 tggcaccggt tgctaagaag ctcatttatc tgggcgagag cggcaccggt cacaccatga
     1921 aggtggtcca taatatgatt acccatgcca actttttcgc cctcagtgag gcggcacatt
     1981 tgggacgacg cgccggcatt gatttggcag atctgatcga ggtgtttaac aacggcaacg
     2041 cgcggagttt tatctccgag cgccgctttc cggatcacat cttatccggg acctgggatg
     2101 gccgctcacg ggtttacaat ctcaacaaag atgtcggcat ggccatcgcg ctcgctgaca
     2161 aactcggtgc aacagtcaat atcggccgca acacctatgc ctatatccag gaagccgtca
     2221 agcaaggccg cgccgaagat gacttcaccc ggctttatcc ggaccttgaa aaattggatt
     2281 ggaaaaagaa gaaaaagcgg aaacagaaat aacttccaac tgttcaactg cacccggtac
     2341 cggggtcgca gctattctca actaagcgcc agatcgacca gctcatcgcc gatgattgtg
     2401 cgttgttcgt cgatgatcgg cgtgacgaca tcggtgaatt tctgccacta agcaccggtt
     2461 agacgaataa tctcgttctc tgccggatca aattttttca gctgctcgat atcttcttca
     2521 attgccaagg cgcgttgaat gttagtcgcc tccagcgcgg ccgcatcaac cgcctcccgc
     2581 acgtcatccg gccagccctc atacagcgtc aggttcacat aaagcccgca gacactcaat
     2641 atgtggccgg tgagcgtgat atagcggtga tatttatgaa cattgaaatg gtaaatattg
     2701 gttagcggat tatcgtgtcc atcaaactca ctgatttcaa tctcggtgat aaaatctttg
     2761 atattttggg cggcgggatc aaagcccaag cggcgataga tgtggccatg gaactcgctg
     2821 ggcagtgtcc gcgtgcgaat gccttcacaa tccttgggct tgcggatcgg ccgcacacgg
     2881 ttggtaaaat ggcggaaact attgtcccag aaatgcagaa tttttatatc tggatgaacc
     2941 ccttcaatag cagcgcgcac ccgattaccg agctcgccat ctagcttggc ataggcttga
     3001 tcacgatcat taaacgtgaa cgttagatcg agcacgctga ctagcggcac atcagacgaa
     3061 aaataattgg tcgaaatgta acagaacttc agttcaccac tttccgtcag cgtaatgaga
     3121 tcgcccgtgc agtaaccaaa cttggtaata tcattatcaa gaacgtaatt gaagtcatct
     3181 cccagccgcg ctttgagtgc atcccccagc gctgcaccgg accgcgtgtg gattgaggtc
     3241 ggattttgat agccgccaaa cctaaaggat agatcagtta taccctcttt tctcgagttg
     3301 tttttttgta gactacacgc ccaaaaaaag aaaatggcac ctccgttgcc gaaggtgcca
     3361 ttaatttttt aatttaaaag cagatgatta ttttttcatc aggcctttaa tcatgtcctt
     3421 gtaagcagca ctttgcgctg ggcgctgttt ttcataagca acgccatcca cataatcggt
     3481 gatttcacca atagctttga ttagtttttt gtaggttttg tctttttgca ctttaagcaa
     3541 agcaccccgg agcttggcga gacgatcagc cggaattttg cgcggcgcca tgataacgcg
     3601 atgcatcaag ccgatgtcgg atgtgtagcc aagatcttta aaggtcggca cgcctttgaa
     3661 agcggttttc gtaccggcgc tgatgagcac ccggacttta cctttttgac ccaagatcgt
     3721 tgatttaaac tgcatggtga aatcagcttc gcgagccaag aaaccacgca ttgaaggtcc
     3781 accgccttta tagggcacca taacaatgct tttggcgata ccggcttcgg tgaaaagctg
     3841 caatgccgga gcatgggttg caccccagtt accggaatga gcaaatttca atttgcctgg
     3901 attttttttc gcgaacgcca ccaactgacc ccaggtttta tatgggctgt tgccatgaac
     3961 gatgacggag aagttgccag agttcagctt accaacagtg ataaaatctt tgtcggt
//
LOCUS       DASCNL010000831         1016 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001712736, whole genome shotgun sequence.
ACCESSION   DASCNL010000831 DASCNL010000000
VERSION     DASCNL010000831.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001712736"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..904
                     /locus_tag="QF359_10935"
     CDS             <1..904
                     /locus_tag="QF359_10935"
                     /inference="COORDINATES: protein motif:HMM:NF015155.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HJO87467.1"
                     /translation="TQSTENERLRATINLQKEIRAFAKISAKSELSSSVKNLGAALNN
                     LLSTENPDHALVNLEHRLLASLPGQLTHLKASLNAVEVTLNDIPPALRSRQIAADGRA
                     KVEINPKGNMRDRHELAAFVKAVRQIAPAATGTPVIIIEAGNTVIQAFSAAAAITFVL
                     IVILVLALTHSIREIALIFAPLLLAALFTLAASVLFNLPFNFANVIVLPLLFGLGIAG
                     SIHLVLRDRDQYSQSVMSTSTPRAIVFSALTTIGSFGSIALSSHPGTSSMGVLLTIAI
                     ALSLICTLIILPALMVVWPKAGTK"
BASE COUNT          245 a          278 c          220 g          273 t
ORIGIN      
        1 aactcaatca acagaaaatg aaaggctgag ggcaactata aacctccaaa aagaaattcg
       61 cgctttcgca aagatatcag ccaaatctga attatcaagc agcgtgaaaa atcttggtgc
      121 ggctctcaat aatcttttat caacggaaaa tcctgaccat gccttggtaa atttggaaca
      181 ccgtttgctg gccagtttgc ccggtcaatt aacgcattta aaagcatcgc tcaatgcagt
      241 ggaggttacg ttaaatgata tcccaccggc cttacgctct cgccagattg ctgccgatgg
      301 ccgggccaaa gtcgagatca atccgaaggg caatatgcgt gaccgtcatg aattggcggc
      361 tttcgtcaaa gcagttcgtc aaattgcccc ggcagcaacg ggaacacctg ttattattat
      421 agaggccggc aacacggtca tccaagcctt tagcgccgcg gcggcaatta ctttcgtgtt
      481 gattgttatt ctggttcttg ctctaacgca cagcatccgt gagatcgcgc ttatttttgc
      541 accacttctg ctcgcagcct tgttcacctt ggctgcctca gtgctattca acctgccgtt
      601 caatttcgcc aatgtcattg tcttaccatt gttgttcggt ctcggtattg ccggctccat
      661 ccacctggtg ttgcgggatc gggatcaata cagccagagc gtcatgtcca cgtcaacgcc
      721 gcgcgccatt gtcttcagcg ccttaaccac catcggctca tttggcagca ttgctctttc
      781 cagtcatcct ggcacatcaa gcatgggtgt actactcacc atcgctattg cattgtccct
      841 aatctgcacc ttgataatcc tgccagcact aatggttgtg tggccgaaag caggtactaa
      901 atgagcacgc tctttccctt aatccggcac gtctccaacc cggtcagtaa cgtcattatc
      961 aaatttccga ttacacccaa ccagataacg agtgcttctt tggttctggg attagc
//
LOCUS       DASCNL010000832         1137 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001712883, whole genome shotgun sequence.
ACCESSION   DASCNL010000832 DASCNL010000000
VERSION     DASCNL010000832.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1137)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1137)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001712883"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            126..1094
                     /locus_tag="QF359_10940"
     CDS             126..1094
                     /locus_tag="QF359_10940"
                     /inference="COORDINATES: protein motif:HMM:NF025025.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJO87468.1"
                     /translation="MDTATAALSIAAVVPCYREKHQIMTVLSKFDVLINHIIVIDDAC
                     PEKTGEFVRENANDPRIQVVIHEKNLGVGGATISGYQKAFELGADIIVKVDGDGQMDP
                     AMIHTLVQPILRGEADYAKGNRFYRLNGLAKMPGARLFGNLALSFASKMSSGYWKIFD
                     PTNGFTAIHQKVAQELALDKISNDYFFESDMLFQLNIARAVVADVPIQAIYGEENSSL
                     KISRILFPFVGKHLANFFRRIAYSYFLRDFSIASIELIIGLIFVTFGVIFGCLEWYNS
                     TVTGTTATAGTVIIAALPLLVGSQLLISFLNFDVNNQPNQPLHPNL"
BASE COUNT          302 a          255 c          252 g          328 t
ORIGIN      
        1 aacgatgcaa caccttgttt tatagcgctt ttccgataca aagccgagta cataagcttg
       61 caccaaatta atgacatggc tatgattcca aaatgcccaa tttaaactct gatacgagtt
      121 catcaatgga cacagccacg gcagcgctta gtattgctgc cgtggtcccg tgctatcgtg
      181 aaaaacacca aatcatgaca gtacttagca aattcgacgt actgataaat catattattg
      241 ttattgatga tgcttgtccc gaaaaaaccg gtgaatttgt gcgcgaaaac gccaatgatc
      301 cgcgaattca ggttgtcatt catgaaaaaa atttaggtgt cggtggtgcc accatctcgg
      361 gctatcagaa ggcttttgaa cttggcgcgg atattatcgt gaaagttgat ggcgatggtc
      421 aaatggaccc agctatgatc catacattgg tccaaccaat tttgcgcggc gaagcagatt
      481 acgccaaagg caaccggttc taccggctaa atggcttggc caaaatgcct ggcgccaggt
      541 tgtttggtaa tctggcgctc tcattcgcgt ctaaaatgtc gagcggttat tggaaaattt
      601 tcgacccgac caatggcttt accgcgattc accaaaaggt cgctcaagaa ttggccttag
      661 ataaaatcag caatgattat ttctttgaat cggatatgtt gtttcagctc aatatcgcga
      721 gagcggttgt ggctgatgta ccaattcaag cgatctacgg tgaagaaaac agctcgctta
      781 aaatttcccg tattttattc ccgtttgttg gtaagcattt ggcaaatttc ttccggcgga
      841 tcgcctatag ttatttttta cgggatttta gtattgcgtc gattgagctg attatcggtc
      901 tgatctttgt cacctttggt gtcattttcg gttgcctcga atggtataat agtacagtta
      961 caggaacaac cgcgaccgcc ggcacagtga tcattgcggc gcttccgtta ctggtgggca
     1021 gccagttgct gattagtttc ctaaacttcg atgtcaacaa ccaaccaaat caaccgcttc
     1081 atccgaattt ataaaatacg ccaaattcgt gccgtcgcgg taattgactc tctctcc
//
LOCUS       DASCNL010000833         1483 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001714856, whole genome shotgun sequence.
ACCESSION   DASCNL010000833 DASCNL010000000
VERSION     DASCNL010000833.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1483)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001714856"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..448)
                     /locus_tag="QF359_10945"
     CDS             complement(<1..448)
                     /locus_tag="QF359_10945"
                     /EC_number="4.4.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF014709.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HJO87469.1"
                     /translation="MSHETAFSAIPLPNREAKPRSNGITMMIDWGLPAGLQTDVIEAS
                     GYYIDMAKLAGSIVGLMPKTTVEKKLAIYRDNDISTSQGGLFTELAYMQGNIDPFFEE
                     IVALGFSAVEVSDNLLNWSLAEKKKTIKRAVEDFGLRVLGEVGKKEG"
     gene            506..967
                     /locus_tag="QF359_10950"
     CDS             506..967
                     /locus_tag="QF359_10950"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HJO87470.1"
                     /translation="MAIKFDIRDRVGYRVQNLANKMILWGARTYAQKFNVGVQEWRIL
                     SVLARTGVGTAREVCELTMMDKGNVSRAVGKLVCSGRIKEQPDKQDKRSSVLILTPKG
                     VELYKRIKKVSDAREKKFWAALTAAERKALPQILTKLDNVIEELLQNPEKV"
     gene            974..>1483
                     /locus_tag="QF359_10955"
     CDS             974..>1483
                     /locus_tag="QF359_10955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87471.1"
                     /translation="MAGENSNIVDSTLVGEVWPAATLAEDPVLYGQAKLSPDGAFEVR
                     SCQTFTLTYTVGRFGIDDNGSLRVVFRFFGDWGGLQMDDPKAPNYVTAVTNVGTKPQL
                     EFCATGGSRPWFKALTARISGGYLSEGNTITITFGDTSGGSPGFKMQTFVESGFEFKV
                     LVDACAVGHY"
BASE COUNT          364 a          366 c          387 g          366 t
ORIGIN      
        1 ccccttcctt tttgccaacc tctcccaata cgcggaggcc aaaatcttca accgcgcgtt
       61 tgatggtctt tttcttttca gcgaggctcc agttcagcaa attgtcggaa acctctacag
      121 cagaaaaacc aagcgccact atctcttcaa agaatggatc aatattgcct tgcatgtagg
      181 caagctcggt aaacagccca ccttgcgaag tgctaatgtc gttatcgcga taaattgcaa
      241 gcttcttctc gacggtcgtt ttgggcatca aaccgacaat cgagccggct aatttagcca
      301 tgtcgatata gtacccggaa gcttcgatga catcggtctg cagaccggcc ggcaaacccc
      361 agtcgatcat catggtaatg ccattgctgc gcggctttgc ttcccggttt ggtagaggaa
      421 tagctgaaaa cgctgtttca tggctcataa tcatctcctt tgaaaaatta gttgtctgaa
      481 caagtatttt ttgtcaagct cccttatggc aataaagttc gacatcaggg atcgggtagg
      541 ctaccgggtt cagaacctgg ccaacaagat gattttgtgg ggagcccgga cctatgccca
      601 aaaatttaat gtcggtgtgc aggaatggcg tatcttatca gtgctggcac gaaccggcgt
      661 gggcacggcc cgcgaggtgt gcgagctgac gatgatggat aaaggcaatg ttagccgggc
      721 ggtaggaaaa ctggtgtgca gtggacgcat caaggagcag cctgacaaac aggacaaacg
      781 cagttctgtt ttgattctca cacccaaggg agttgagctc tataaacgga tcaagaaggt
      841 atctgatgcc agagagaaaa aattttgggc cgcgctgaca gccgcagagc gaaaagcact
      901 gccgcagatt ttaaccaaat tggacaatgt aatcgaagaa ttgctgcaga acccggagaa
      961 ggtataattc atcatggcag gtgaaaactc aaatattgtc gattctactc tcgttggtga
     1021 ggtctggcct gctgccacac tggcagaaga cccggtgctt tatggccagg ctaaattgtc
     1081 gcccgacggc gcctttgaag tgcgctcttg tcagactttt acgctgacct atacggtggg
     1141 ccgctttggc atcgacgaca atggcagcct tcgtgtcgtc tttcgttttt ttggggactg
     1201 gggcggcctg cagatggatg atcccaaagc gcccaactac gttaccgcgg tcaccaatgt
     1261 cggcaccaag ccacagcttg aattttgcgc gaccggcggg tcgcgaccgt ggttcaaagc
     1321 gcttacggcg agaatttccg gcggctattt atccgaaggc aacaccatta ccatcacttt
     1381 cggcgatacc tccggtggtt caccgggttt taaaatgcaa actttcgttg aaagcggctt
     1441 tgaatttaaa gtgctggtcg atgcctgcgc cgtgggtcat tac
//
LOCUS       DASCNL010000834         1260 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001717548, whole genome shotgun sequence.
ACCESSION   DASCNL010000834 DASCNL010000000
VERSION     DASCNL010000834.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001717548"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            13..177
                     /locus_tag="QF359_10960"
     CDS             13..177
                     /locus_tag="QF359_10960"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO87472.1"
                     /translation="MQMFGGWGYMWEYPVARAYAEARIERIAGGSSEIMKSIICKSIF
                     KEMGIKADFS"
     gene            224..>1260
                     /locus_tag="QF359_10965"
     CDS             224..>1260
                     /locus_tag="QF359_10965"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJO87473.1"
                     /translation="MFKLDDLGDGVKVIVFDRPDSPHNFMNEDIVAQLHDLVRHTSSD
                     DQVKGVILASNKASFVVGGDLKELQALKTPEDAAAIIAGVQACMRDMELAPKPFVAAI
                     NGLALGGGLELALACSYRIAADDPRLTVGLPEVSLGLIPGAGGTQRLPRLVGLAAALP
                     IMIEDKQVLGEQAEKMGLVDERVPADNLRETAKQRILDSTASSSQPWDQDGFKRPDPQ
                     LSSDDGKQIIDGMLAKIGRKKPGLEPAPEAIMTAVQLGFEKDIDEGLKIERQQFASVA
                     AGAVVKNKIRTLFLGIPAASTMKDRPKNVDPYEISSVAVIGVGLMGSGIAYCAALAGY
                     KVFLLEVSQEA"
BASE COUNT          287 a          279 c          377 g          317 t
ORIGIN      
        1 gttgatacct gtctgcagat gtttggtggc tggggttaca tgtgggaata cccggtggcc
       61 cgggcctatg ccgaagcgcg gattgagcgg attgccggcg gcagttcgga aatcatgaag
      121 tcgatcatct gcaaatccat atttaaggaa atgggtatca aggccgattt cagttaagcc
      181 aatgcttgac gctcttcagc gtgtggaatt aggagaaaat ttaatgttta aactcgatga
      241 tttgggcgat ggtgtcaaag tgatcgtatt cgaccgcccc gattccccgc ataattttat
      301 gaacgaggat attgttgccc aacttcatga tttggtgcgc cataccagca gtgatgatca
      361 ggttaagggc gttatactgg cctcgaacaa ggcgtctttt gtcgttggcg gcgatttgaa
      421 agaattacag gcgcttaaaa ctccggaaga tgctgcggcc attattgccg gggtgcaggc
      481 ctgtatgcgg gacatggaat tggcgcccaa gccttttgtt gctgctatta atggtttggc
      541 gcttggtggt ggattggaat tggcactcgc ctgcagctat cgtatcgccg ccgatgaccc
      601 tcggctaacg gttggcctac cagaagtttc actgggcctg atccccggtg ccggtggcac
      661 gcagcgtttg ccgcgtttgg ttggtttggc cgcagccttg ccgattatga ttgaggataa
      721 gcaggttttg ggtgagcagg ctgagaaaat gggtctggtg gatgaacgtg tgccagctga
      781 caaccttcgc gaaacggcca agcaacgtat ccttgatagt acggcgtcta gctctcagcc
      841 ctgggaccag gatggcttta agcggccgga cccacaactt agttctgacg atggcaaaca
      901 gataatcgat ggcatgctgg caaaaatagg gcgcaaaaag cctggccttg agccggcgcc
      961 agaagccatc atgactgctg tgcagctggg ttttgaaaaa gatattgatg aagggctgaa
     1021 gattgagcgc cagcaatttg ccagcgtggc tgccggcgca gtggtgaaaa ataagatcag
     1081 gactttgttt ctgggtattc cagcggcaag tacaatgaaa gaccggccga aaaatgtcga
     1141 cccttacgag atttcgagcg ttgccgtaat cggcgtcggt ttgatggggt caggaatagc
     1201 ctattgtgcc gccttggccg gctacaaagt atttctcttg gaggtctccc aagaagcttt
//
LOCUS       DASCNL010000835         3186 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001719473, whole genome shotgun sequence.
ACCESSION   DASCNL010000835 DASCNL010000000
VERSION     DASCNL010000835.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001719473"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="QF359_10970"
     CDS             <1..203
                     /locus_tag="QF359_10970"
                     /inference="COORDINATES: protein motif:HMM:NF013866.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJO87474.1"
                     /translation="HFGETDQHSPPEIIAGVKENIPDAESYVYDAGHGFANDARPNFY
                     VEDAAKLARQRSLEFLDRIHGA"
     gene            210..1103
                     /locus_tag="QF359_10975"
     CDS             210..1103
                     /locus_tag="QF359_10975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87475.1"
                     /translation="MADNEAGPYKSCQPPDPNPNKPQLTLPPGACDAHCHIFGPGDVF
                     PYHPSRSYTPPDASRQTLKALHDFLGLERAVIVQASCHGPDNTALLDAIAHSNGKYRG
                     VAHVDESYGEKELLALHEGGVRGVRFNFVKHLGGAPDIDFLRRTVDAIRGLGWHLVLH
                     FDAADLLEYKTLLSELNISIVIDHMGRPVASEGVEQAPFQTLLEFMKGENCWVKVCGS
                     ERISATGAPFHDAVPFAQKLMEVTPDRVIWGTDFPHPNIKGDMPNDGDLVELIALIAP
                     DESQRQKLLVDNPARLYGFEG"
     gene            1109..2179
                     /locus_tag="QF359_10980"
     CDS             1109..2179
                     /locus_tag="QF359_10980"
                     /EC_number="5.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalomesaconate tautomerase"
                     /protein_id="HJO87476.1"
                     /translation="MQISIPCTMMRGGTSKGAYFLKSDLPEKEAERDQVLLSVMGSPD
                     DRQIDGLGGANPLTSKVAIVSKSDEPNVDIDYLFAQVVVDQPVVGYGQNCGNILAGVG
                     QFAIEKGLIEAGSPTTDVTVLMVNSGDKAVVTVPTPDGEVSYEGDAEIDGVPGTAAPV
                     PLNFIDTAGSLCGALLPTGNIVDEIDGIELTCIDSGIPVVVMRAKNFGLSGTETVEQL
                     EANEDLKARLESIRLQVGPMMNLGDVTDKTAPKMTLVSAPKSGGVISTRSFIPHRCHP
                     TIGVFAAMTVATACLIPGTPAAEIAGDLSAAGSELVIEHPSGALAVDIEVEQKDGEIE
                     LKRSGFLRTARKLYEGTVFISE"
     gene            2194..3072
                     /locus_tag="QF359_10985"
     CDS             2194..3072
                     /locus_tag="QF359_10985"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HJO87477.1"
                     /translation="MTNIAFIGFGEAAGLLTDGLAEAGAEVTATYDILIDNPDKASAH
                     NEKAGSKGVIAAEDAEQAVKEADIVISAVTSKEILVAAKNVAPHLIVGQIYMDINSAS
                     PEVKRQAAAAIEATGAHFVEAAVMDLVPPHGHKVPMLLAGTKAETLAATLSVYGMNVK
                     AIGNKIGNASSVKMVRSVFMKGFSAILLESLVAAHKLDAADTMLESLQVTFPEIDWKV
                     LASKTMSRLIKHSKRQSEEMNSVAATLQELGIEPMTAKATGARLGWLADLELDDALDS
                     LPETYDEFLKILEQYS"
BASE COUNT          787 a          745 c          891 g          763 t
ORIGIN      
        1 tccacttcgg tgaaaccgat cagcactcgc cacctgaaat tattgccgga gtgaaagaga
       61 atattccgga cgctgaatca tatgtttatg acgccgggca cggctttgcc aatgacgcca
      121 gaccgaattt ctatgtcgaa gatgcggcga agctggcgcg gcaacgaagt ctcgaatttt
      181 tagatcgcat tcatggcgcg taaagtctaa tggctgacaa tgaggcagga ccttataagt
      241 catgccaacc accagatccg aatccgaaca agccccagct gactttgccg ccaggagcgt
      301 gtgatgcgca ttgccacatc tttgggccgg gcgatgtttt tccttatcat ccatcacgct
      361 cctatacgcc gccggacgcc tcgcgccaga ctttgaaagc actgcatgat tttcttgggc
      421 ttgaacgcgc cgttattgtt caggcgagtt gccacggacc cgacaataca gcgctgttgg
      481 atgcgatagc gcacagcaac ggtaagtatc gcggcgtcgc tcatgtcgat gaaagttacg
      541 gcgaaaaaga actgttggcg cttcatgaag gcggggtccg cggtgtgcgc tttaatttcg
      601 ttaaacatct gggcggtgcg ccggatatcg attttctacg gcggactgtg gatgctatcc
      661 gcggtcttgg ttggcacttg gttttgcatt ttgatgctgc cgacttgctt gaatacaaaa
      721 cgctgctcag tgagttgaat atttcgattg tgattgatca tatgggtcgc ccagtagctt
      781 cagaaggcgt cgaacaagca ccgtttcaaa ccctgctgga attcatgaaa ggtgaaaatt
      841 gttgggtcaa agtctgcggc tcggaacgga tatcggctac aggtgcgccg tttcatgatg
      901 ctgtgccttt tgcccaaaag ttaatggagg tgactccgga cagggttatt tggggcactg
      961 atttccccca tcccaatatc aaaggagata tgccaaacga tggcgatctg gtagaattga
     1021 ttgcgttgat tgcaccggat gaaagccagc ggcaaaaact gctcgtcgat aatcctgcga
     1081 gactatatgg ctttgaaggc tagttaaaat gcaaatatca attccttgca ccatgatgcg
     1141 aggcggcacg tccaaagggg cttactttct caagtcagac ctgcctgaaa aagaggccga
     1201 gcgggatcag gtcttgctgt cggttatggg ctcgcccgat gaccggcaaa tcgatggtct
     1261 cggcggcgcc aacccgctga ccagtaaggt cgccattgtc agtaaatccg atgagcccaa
     1321 tgtcgatatc gattatttgt ttgctcaggt cgtcgtcgat cagccggtag ttggctatgg
     1381 tcaaaactgc ggtaatatcc ttgctggcgt tggccaattt gcgatcgaaa aaggtttgat
     1441 agaagctggc tctccaacta ccgatgtcac ggtcttaatg gtcaatagcg gcgacaaagc
     1501 ggttgtcacg gtgccgacac cggatggcga ggtgagctac gagggtgatg ccgaaatcga
     1561 tggagtgccg ggaacagctg cgccggtgcc gcttaatttc atagataccg caggctcgct
     1621 ctgcggtgct ttgctgccga ccgggaatat tgtcgatgag atagatggaa tagagctgac
     1681 ctgcattgat agcggcatac cggtagtggt gatgcgggcc aaaaattttg gcctttctgg
     1741 cacggaaacg gttgaacaac tggaagccaa tgaagattta aaggcacgtc ttgaaagcat
     1801 tcgtctgcag gtcgggccga tgatgaatct cggcgatgtc accgataaaa cagcacctaa
     1861 aatgacgctg gtttcggcgc ccaaaagcgg tggggttatc tcgacgcgtt cttttatacc
     1921 ccaccgctgt cacccgacaa tcggtgtgtt tgctgcgatg accgtggcga cggcgtgttt
     1981 gataccgggc actccggcgg ctgagattgc cggtgattta agtgctgccg gatctgagct
     2041 cgtgatagaa catccgagcg gcgctttggc agtcgatatc gaggttgagc aaaaagatgg
     2101 cgagatagaa ctcaaacgtt ccggctttct gcgcacagcc cgcaaactat acgaaggcac
     2161 cgtctttata tctgaatgaa agaccaaagt aagatgacaa atattgcctt tatcggtttt
     2221 ggtgaagcgg ctggattatt gaccgatggt ctggcggagg cgggggctga ggttacggca
     2281 acttacgata ttcttatcga taatcctgac aaggcgtcgg cgcataatga gaaagccggc
     2341 agtaaagggg tgatcgcggc tgaggatgct gagcaagcgg ttaaagaggc cgatattgtc
     2401 atctcagctg ttacgtccaa agaaattttg gttgcggcga aaaatgtcgc gccgcactta
     2461 atagttggcc aaatctatat ggatatcaat tcagcttcac ccgaggtcaa acggcaggcg
     2521 gcggcggcga ttgaagcgac cggcgcccat tttgtcgagg ctgcggtgat ggatttggtg
     2581 ccgccgcacg gtcataaagt accgatgttg ctggccggca caaaagcaga aacgctagcg
     2641 gcgaccctta gcgtctatgg tatgaacgtc aaggccattg gcaataagat cggcaatgca
     2701 tcatcagtca aaatggtgcg gagtgtcttt atgaaaggct tctcagcgat cctgctggaa
     2761 agtctggttg cggcgcacaa attagatgct gccgatacga tgcttgaatc tttgcaagtt
     2821 acattcccag agatagactg gaaggtactt gcgagcaaaa caatgagccg tctcatcaag
     2881 cattctaagc gccaatcgga agaaatgaac tctgtcgccg caacactgca agagttgggt
     2941 attgagccca tgacggcaaa ggcgaccggt gctcgacttg gctggcttgc cgacttagaa
     3001 ttggatgatg ctttggatag cctgccggaa acttatgatg agtttttgaa aattcttgaa
     3061 caatatagtt gaaccacgtg ccagaccaac cagatcagcc aaatcaatcc gtacaaagca
     3121 acatactcct cggcattcta ttgacaattg ctgccggtag ctcaatggcc atgatggatg
     3181 cgatca
//
LOCUS       DASCNL010000836         2306 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001719779, whole genome shotgun sequence.
ACCESSION   DASCNL010000836 DASCNL010000000
VERSION     DASCNL010000836.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001719779"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="QF359_10990"
     CDS             complement(<1..250)
                     /locus_tag="QF359_10990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HJO87478.1"
                     /translation="MNSLGIDKDPQDTRVVVAMSGGVDSSVTAALLHDEGYDVIGITL
                     QLFDYGNAVAKPGTCCAGQDIYDARRVADACGFPHYVLD"
     gene            complement(247..879)
                     /gene="tenA"
                     /locus_tag="QF359_10995"
     CDS             complement(247..879)
                     /gene="tenA"
                     /locus_tag="QF359_10995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050334 - thiaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006772 - thiamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HJO87479.1"
                     /translation="MKSENQADWDAYIKHDFVAQLADGSLAKASFKHYLGQDYLFLIH
                     FARAFALAAYKAESLVDIRQAAGGLVAIVDLEMDLHVKFCADWGLSEADMEALPEAPE
                     TMAYTRYVLEKGLSGDLLDLHVALAPCIIGYAEIGAALQDNITGNPYGAWIEMYVSED
                     YQAVVNAEIEQLDSLLVSRGGEGRFDALAKNFNQATRLEIAFWQMGLDVK"
     gene            complement(894..1223)
                     /locus_tag="QF359_11000"
     CDS             complement(894..1223)
                     /locus_tag="QF359_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJO87480.1"
                     /translation="MPKITFFDSSGNSTEVDAPGGKSVMDIAQANNIDIEGACEGSLA
                     CSTCHVIVLPDWYEKLKPVTEEEEDMLDLAHGLTRTSRLCCQIDMTEELDGLVVTLPA
                     DTHNLLI"
     gene            complement(1247..1600)
                     /locus_tag="QF359_11005"
     CDS             complement(1247..1600)
                     /locus_tag="QF359_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HJO87481.1"
                     /translation="MNANEPIGNQIILTDAAIERVKTLIGNADKPVLGLRVGVTTMGC
                     NGHSYLVEYAEEKKLLEDEIQQDGVTIFVDPLAMMYLFGSTMDYVEDKLQSSFVFDNP
                     NEIGRCGCGESFNVG"
     gene            complement(1647..2117)
                     /locus_tag="QF359_11010"
     CDS             complement(1647..2117)
                     /locus_tag="QF359_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF59 domain-containing protein"
                     /protein_id="HJO87482.1"
                     /translation="MNEKIMPPSYSPGAGLHGPTGSPGFGAPMGGDIDPEILSEGGLV
                     GKAGEPKAEGKTVPSDEAIIDAIRTVYDPEIPVNIYELGLIYELNVDQNGDVKIEMTL
                     TAPGCPVAGILPQQVADAAASVDGTGEIEVYLVWEPAWDMDKMSEDAKLALGFF"
BASE COUNT          590 a          643 c          493 g          580 t
ORIGIN      
        1 aatccaaaac gtagtgcggg aaaccgcaag catcggcaac gcgcctggca tcataaatat
       61 cctgaccggc gcagcaggtg cccggctttg ccactgcatt accgtagtca aataactgca
      121 aggtgatgcc gatgacgtcg tagccctcgt catgcaacaa cgccgctgtt acggatgagt
      181 cgacgccgcc cgacatcgcg acgacgacgc gggtatcttg cgggtcttta tcgatgccta
      241 ggctgttcat tttacatcca agcccatctg ccagaaggca atctccagcc gggttgcctg
      301 attaaagttt tttgccagcg catcgaaccg cccttcgccg ccgcgcgaca ccagtaaact
      361 atccagttgc tcaatttccg cgttcaccac cgcttgatag tcctccgata catacatttc
      421 aatccacgcg ccataggggt taccggtgat gttgtcctgt aatgccgcgc cgatttccgc
      481 atagccaatg atgcagggtg ccaaagccac atgaaggtcc aagagatccc ccgataagcc
      541 tttctccagg acatagcggg tataggccat agtttcaggc gcttccggca gggcttccat
      601 gtcggcttcg ctcaaacccc aatcggcgca aaattttaca tggagatcca tttcgagatc
      661 aacaatcgct accaagccgc cagccgcttg tctgatatcg accaagctct cagccttata
      721 cgccgctaag gcaaaagcgc gggcaaaatg gatcaaaaac agatagtcct ggccgaggta
      781 atgtttaaag ctggctttgg cgagggagcc gtctgctaat tgagcaacaa aatcatgctt
      841 gatataagca tcccaatcgg cctgattttc cgacttcaaa cgcccgaata aactcatatc
      901 aacagattat gggtatcggc cggcaaagtc accaccagcc catccaattc ctcggtcata
      961 tcaatttgac aacagagcct ggaggtccgg gttaaaccat gggcgaggtc gagcatgtcc
     1021 tcttcctctt cggtaaccgg cttaagtttt tcataccaat cgggtaaaac gataacgtga
     1081 caggtggagc aagccagcga accttcgcac gcgccttcaa tatcaatatt attggcttgg
     1141 gcaatatcca tcacagattt accgcccggc gcatccactt cggttgaatt gccacttgaa
     1201 tcgaaaaatg taattttagg catgaggtct ctattaatta agaatattag ccgacgttaa
     1261 aagattcacc acagccgcaa cggccaattt cattaggatt atcaaataca aaactcgact
     1321 gcaatttatc ttcaacgtaa tccatcgtcg agccaaaaag atacatcatc gccagtggat
     1381 caacaaaaat agtaacgccg tcctgttgaa tttcatcttc cagcagcttt ttctcttcgg
     1441 catattcaac cagatagctg tgaccgttgc agcccattgt cgtgaccccg acacgcaaac
     1501 ccaggacggg tttatcggca ttgccaataa gcgttttcac gcgctcaata gcggcgtcgg
     1561 ttaatataat ttgattacct atcggttcat tggcgttcat tatttgaatc ctacctctca
     1621 aacaaacaac ttaagtttta tatagtctaa aagaacccaa gtgcgagttt tgcatcctcc
     1681 gacattttat ccatatccca ggccggttcc caaacgagat aaacttcgat ctcacccgtg
     1741 ccgtcaacag atgccgcagc atcggcaact tgctgcggta atatacctgc caccggacaa
     1801 ccgggcgccg tcagcgtcat ctcgattttt acgtcgccgt tttggtcaac attcaactca
     1861 taaatcaagc cgagttcata aatattaacc ggaatttccg gatcatacac ggtccgtatc
     1921 gcatcaataa tggcttcatc ggaaggcacc gttttacctt ctgcttttgg ctcaccggct
     1981 ttgccgacga ggccgccttc acttaatatt tccgggtcaa tgtcaccacc catcggcgca
     2041 ccaaatccag gcgagccggt cggtccatgc agtccggcac ccgggctata actcggaggc
     2101 attattttct cattcataat cttagtctcg ttctatcgtt taatcattca gtcgatgcag
     2161 cttctttacc gtgaacggct gcgttcattg tgtgccaagc gagcgtcgcg catttgaccc
     2221 gcatcgggaa ttgtttgacg ccagagagca ccattaattt atccaaatca tctttaaatt
     2281 cttcaggcgt ttcgccgatt tcctca
//
LOCUS       DASCNL010000837         1057 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001720813, whole genome shotgun sequence.
ACCESSION   DASCNL010000837 DASCNL010000000
VERSION     DASCNL010000837.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001720813"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..809
                     /locus_tag="QF359_11015"
     CDS             <1..809
                     /locus_tag="QF359_11015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HJO87483.1"
                     /translation="IDQAAVNQWLAANKPDVVVIAAATVGGILANSTRPAEFIYNNIA
                     IESNIIAAAHQNNVEKLLFLGSACIYPREATQPMAEEALLTGPLEPTNEWYAIAKIAG
                     IKMCEAYRQQYGCDFISAQPNNLYGPGDNFDLESSHVIPALMHKAHIAKINGDQTMPI
                     WGSDQVFREFLHVDDCADALVHLIKYYSGAIHVNMGTGEEVTIKELAEIIAKVVGFEG
                     ELEFDTSKPDGSPRKLLDSSRMQRLGWTSTTSLEAGLTTTYQWFLKNISD"
     gene            complement(858..>1057)
                     /locus_tag="QF359_11020"
     CDS             complement(858..>1057)
                     /locus_tag="QF359_11020"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024914.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJO87484.1"
                     /translation="LGVEGLVLPSKDSTGLTEALRLLVNNAEQRRQMSIAARRRVEQG
                     FSWDDYIDRAIAAYHALVAAR"
BASE COUNT          262 a          293 c          259 g          243 t
ORIGIN      
        1 tgattgatca ggccgccgtt aatcaatggc tggcagccaa caaacccgat gtggtggtca
       61 tcgcggcggc gacagtcggc ggcattctcg ccaattcaac ccgaccagct gaatttatct
      121 ataataatat cgcaattgag agcaacatca tcgcggcggc ccatcaaaat aacgttgaga
      181 aactgttatt tttgggctcg gcctgcatct accctcgtga ggccacccaa ccgatggctg
      241 aggaagcatt actgaccgga ccactcgagc cgacaaatga gtggtacgcc atcgccaaaa
      301 ttgccggcat taaaatgtgc gaggcctacc gccagcaata tggctgcgat tttatctcgg
      361 cccagcccaa taatctttac gggcccggtg ataatttcga tctcgaaagc agtcacgtta
      421 ttccagcatt gatgcacaag gcgcatatcg ccaaaatcaa tggcgaccag acaatgccga
      481 tttggggctc ggaccaggtt ttccgggaat ttctccatgt cgatgattgc gctgatgccc
      541 tggtccattt gatcaaatat tacagcggtg ccatccacgt caatatgggc accggcgagg
      601 aagtgacgat caaggagctc gccgaaatca ttgccaaggt agtcggcttt gaaggagagt
      661 tggaatttga tacctcaaag ccagacggct caccgcgcaa attgctcgac tccagccgta
      721 tgcaaagact cggctggact tctacgacat cgctcgaggc tggactgacc acaacctatc
      781 agtggtttct caaaaatatc tctgattagc agccgttcaa attttgcttt ttcaccggcc
      841 ggcattgatc ccggccgcta cctcgccgcc accaacgcgt gataggccgc aattgcacgg
      901 tcgatataat catcccagct aaagccctgc tcaacccggc ggcgagcggc gatactcatt
      961 tggcggcgtt gttccgcatt attaacgagt agtctgagag cttcggttaa gccagtgcta
     1021 tcttttgacg gcagaaccag tccctcaaca cctagtt
//
LOCUS       DASCNL010000838         2889 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001724528, whole genome shotgun sequence.
ACCESSION   DASCNL010000838 DASCNL010000000
VERSION     DASCNL010000838.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2889)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2889)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2889
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001724528"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            9..587
                     /locus_tag="QF359_11025"
     CDS             9..587
                     /locus_tag="QF359_11025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HJO87485.1"
                     /translation="MHDLLKEVRACEICAPDLPLGPRPTVVAKSSAKIMIIGQAPGTK
                     VHETGIPWSDPSGDRLRNWLRVTREIFYDGSKIAIMPMGFCYPGRLERGGDNPPRPEC
                     APAWHEKILAGLPDIKLTLLVGMYAQKYYLAEQNKKTLTETVRHWQEFAPAMIPTPHP
                     SWRTTAWLKKNLWFEAELLPVLQQKVRKLLEG"
     gene            complement(573..1499)
                     /locus_tag="QF359_11030"
     CDS             complement(573..1499)
                     /locus_tag="QF359_11030"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87486.1"
                     /translation="MLDRRQSSFQKLPLNIRGGIWMILAGVFFTFLGVMVRMANKEVH
                     VLEIVFFRYFISLLIMAPWMMRRGLSGLRGNNLPLLGARSVSSYIGAMLWFASIIFLP
                     LAEATALGYTMPLFVTLGAVLFLGEIVRKRRWWALFAGFAGTLIILRPGIEVVTWPTI
                     FAIGGAVFIACSALMVKVLSRRDSPDTIVLYMAVFSTPLSLVAATFVWVTPSLETLLW
                     LIGIGTASTLAHLAYTRSFAIADASAVLPYDYLRLLMVAAVGFAIYGEVLDFWTWIGT
                     AVIVGSTFYIARREAITAKKSATELSSASPLQ"
     gene            1637..>2889
                     /locus_tag="QF359_11035"
     CDS             1637..>2889
                     /locus_tag="QF359_11035"
                     /EC_number="6.2.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030729 - acetoacetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019287 - isopentenyl diphosphate
                     biosynthetic process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate--CoA ligase"
                     /protein_id="HJO87487.1"
                     /translation="MSDQDTNILWQPSEDRVCQTNITAFIEAAEDDWSTSIGDFEGLY
                     KFSIEQSKKFWQSLIDFSGVSAETWGTVVLENPDQMPGAVWFPEAKLSYAENLLRRRD
                     NADALVFWGEDQVKKRFSYGELYNEVSRLAQAMLAAGLAAGDRVGAYMPNMPETIIAM
                     LAANSIGAIWSSCSPDFGVQGVLDRFGQIEPKLVIACDGYFYNGKSHDNLEKVISVLA
                     ALPSVETTLIVPYSRKFPPIEDVPNAVLWDDFIADFKAHDITFSRLPFNHPLYIMYSS
                     GTTGVPKCIIHGAGGTLLKHLSEHLLHCDEKPGDRVFYFTTCGWMMWNWLVSGLACQS
                     TLLLYDGSPFYPDGNVLFDFAEAEGMTLFGTSAKYIDAVKKAGLEPAKSHNLEKLKAM
                     ASTGSPLVPESFDFVYEKIKKDFHLA"
BASE COUNT          753 a          706 c          751 g          679 t
ORIGIN      
        1 aaaataaatt gcatgatctt ctaaaggaag ttcgcgcctg tgaaatctgc gcgcctgatt
       61 tgccgttggg accacgtcct acagtggtgg ctaagtcttc agctaagatt atgatcatcg
      121 gccaagcccc cggcaccaaa gtgcacgaga ccggcatccc gtggagcgat ccctctggtg
      181 accggctgcg gaactggctg agagtgaccc gcgagatatt ttatgacggc agcaagattg
      241 ccattatgcc gatggggttc tgttatccgg gccggcttga gcgcggtggc gataatccgc
      301 cccgccctga atgtgcacca gcctggcacg aaaaaatcct ggctggtttg ccggatatta
      361 aacttacctt gctggtcggc atgtatgcgc aaaaatatta tctggcggag caaaacaaaa
      421 aaaccctgac cgaaaccgtg cgtcattggc aggaatttgc acccgcaatg atcccaacgc
      481 cgcatccatc ttggcgcacc acggcgtggc ttaaaaagaa cctgtggttt gaagctgagt
      541 tattgccggt cttgcagcaa aaagtcagaa aattactgga ggggtgaagc cgagctcagt
      601 tcggttgctg atttttttgc cgtgatggcc tcgcgccggg caatatagaa agtcgagccg
      661 acgatgacgg ctgtaccaat ccaggtccaa aaatcaagca cctcaccata aatcgcaaaa
      721 ccaacagcgg ctaccatcag caaccgtaaa taatcatacg gcagtacggc agatgcgtcg
      781 gcgatggcaa aggaacgggt ataggcgaga tgggctaaag tcgaggccgt accgatcccg
      841 attagccaca ataaagtctc cagcgacggt gttacccaga caaaggttgc ggcgaccaat
      901 gataggggtg ttgaaaagac ggccatatac aaaacgatgg tgtcggggga atctctgcgg
      961 ctcagcactt ttaccattag ggctgagcaa gcaatgaaga ccgcgccgcc aatggcaaat
     1021 atggttggcc aggttaccac ctcaatgccg ggacgcaaaa tgatcaaggt gccggcaaac
     1081 ccggcaaata aagcccacca gcgccgctta cgcacaattt cacccaaaaa cagcaccgct
     1141 ccgagagtga caaaaagcgg catggtgtaa ccgagcgccg ttgcttcagc taagggcaga
     1201 aatataatcg aggcaaacca caacatcgct ccgatatagc tggagacact tctagcgccc
     1261 aacagtggca gattgttgcc gcgtaatcca ctaagaccgc gccgcatcat ccaaggtgcc
     1321 ataatcaaca ggctaatgaa gtagcggaaa aagacaattt ccagcacgtg aacttctttg
     1381 ttggccatgc ggaccatgac gcctagaaaa gtgaaaaaga cgccagctaa tatcatccaa
     1441 atcccaccac gaatgtttag ggggagtttc tgaaaggaag attgccggcg gtctagcatg
     1501 gggtctcgtt actcattggc ctaatcgata tatcaaacgg gcgggattga aaaccacaag
     1561 caacgctgag ggtgtggtaa tagcggcagg attgtctata attctgccaa ctaatttcct
     1621 taccagggaa acaatcgtga gcgatcagga cactaatatt ttgtggcagc cgtcagaaga
     1681 ccgggtttgc caaaccaata tcacagcttt tattgaggct gccgaagacg actggagcac
     1741 cagtatcggt gattttgagg ggctctataa attctccatt gagcaaagca aaaagttttg
     1801 gcagtcattg atcgattttt ctggtgtcag tgctgaaacc tggggcacag tcgtgctcga
     1861 aaatccggat caaatgccgg gtgccgtatg gtttccggaa gccaagctaa gctatgccga
     1921 aaatttgctg cgtcgccgcg ataatgccga cgcgctggtt ttttggggtg aagatcaagt
     1981 caagaagcgt tttagctatg gggagttgta caatgaagtc tcccggttgg cacaagccat
     2041 gctggcggcg gggctggccg ccggtgaccg ggttggcgct tacatgccta atatgccgga
     2101 aaccatcatc gccatgctgg cagccaatag catcggcgcg atctggtcat cgtgttcacc
     2161 ggattttggt gtccagggcg tgcttgaccg ctttggtcaa attgaaccca agctggtcat
     2221 tgcctgtgat ggctattttt ataacggcaa atctcacgat aatcttgaaa aggtgatttc
     2281 agttttggca gcactaccga gtgttgaaac aacgctgatc gtgccttact cacgcaaatt
     2341 tccgcctatc gaagatgtgc ccaatgcagt gttgtgggat gatttcattg ccgatttcaa
     2401 agctcatgat attacctttt cccggctgcc ctttaatcat ccgctttaca tcatgtattc
     2461 ttccggcact accggcgtac ctaaatgtat tatccatggt gctggcggga cattgctcaa
     2521 gcatctctct gaacatctct tgcattgtga tgaaaagccc ggtgatcggg tattttactt
     2581 caccacctgc ggctggatga tgtggaactg gctggtttcg ggtcttgctt gtcaatcgac
     2641 actattactc tatgacggtt caccatttta tcctgacggt aatgtattat ttgattttgc
     2701 cgaggccgaa ggcatgacgt tgttcggcac ctcggccaaa tatattgatg cggtgaaaaa
     2761 ggccgggcta gagccggcaa aatcccacaa tcttgaaaag cttaaagcca tggcgtcgac
     2821 tggctcgccc ttggtccccg agagtttcga ttttgtttat gagaagatca aaaaagattt
     2881 tcatttggc
//
LOCUS       DASCNL010000839         1984 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001730073, whole genome shotgun sequence.
ACCESSION   DASCNL010000839 DASCNL010000000
VERSION     DASCNL010000839.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001730073"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="QF359_11040"
     CDS             complement(<1..415)
                     /locus_tag="QF359_11040"
                     /inference="COORDINATES: protein motif:HMM:NF024996.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HJO87488.1"
                     /translation="MKKALYMTTALAAAGVLAFGATDVIAAEKAKKKKLVKMSISSGG
                     FFNTRFGVSSNASKFESTVNATARTHYDAFDIKTDSEVYFKGNTELDNGVKVDVTIQL
                     ETDAMNGGIIDESYVQFTLPDAGKVKMGATKGGSPA"
     gene            973..1419
                     /locus_tag="QF359_11045"
     CDS             973..1419
                     /locus_tag="QF359_11045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3576 domain-containing protein"
                     /protein_id="HJO87489.1"
                     /translation="MPDTMVIDDKLVNMDERETIWGDSGGLTLGGDSNSNTGAGPSIG
                     VNAFLWRATLDTMSVWPINSADPFGGVVITDWYAPPTTPNERFKMNIYILDRALRADG
                     VRVSVFRQVKNTVGDWQDAIVQPTTATKLENAILMRARQFRNRTNQ"
     gene            1525..>1984
                     /locus_tag="QF359_11050"
     CDS             1525..>1984
                     /locus_tag="QF359_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HJO87490.1"
                     /translation="MARYNFKEAEPRWQKLWHDKKCFEVSEADDLPKYYVLEMFPYPS
                     GRIHMGHVRNYTLGDLVARYKKARGFNVLHPMGWDAFGLPAENAAIANNVPPAEWTEQ
                     NIATMRGQLKSMGLSYDWTREIATCMPEYYAHEQKMFLDFIKAGLAYRKES"
BASE COUNT          547 a          439 c          442 g          556 t
ORIGIN      
        1 aagccggaga accacccttc gttgcgccca tcttaacttt acccgcatcg ggcaaggtaa
       61 actgcacata agattcatca attatgccgc cgttcatggc gtcagtttcc aactgaatag
      121 tgacatcaac cttaacacca ttatcgagtt ctgtattacc tttgaagtaa acttccgaat
      181 cagttttgat atcgaatgca tcgtaatgcg tgcgggcagt ggcgttgact gttgattcaa
      241 acttacttgc gttggaggat accccgaacc gggtattgaa aaagccacca ctagagatcg
      301 acattttcac taattttttc ttcttagctt tttcagcagc aataacgtca gtggcaccaa
      361 aggccagaac gccagcagct gcaagagctg tcgtcatata aagagctttc ttcatgttac
      421 ttctcctaaa tatccctcac cctgcggaca gacaattgcc cgaataaaaa ggtcgaagaa
      481 tttcattcac cgtcataaag ccacgggttg ggttgtgggt caagtaaaga tgagctattt
      541 taccaggatt tttcaatata gtgatattta tacaacatat ctaagctatt aatatatata
      601 ggttttttta ataaattacc cagtgtgtgt tttttatcac agactatttc cggttaattt
      661 cgccaaactt gctaaaacct aagctattga tattacaatg ttaattgata cggctgtcgg
      721 cgttaataaa atcatgttat gatattctca ggcgattgaa attactgggt ttttttacaa
      781 aattggagta taacacgcca atctagcagt ctttaccatc aaaaagtgcc cgttttaacg
      841 cgaactagcg gaagaaaagc aagtatgatc aataagttac agtcttttat taagtgtggg
      901 agaactcgag cacccattta tctcgccctt tccataattt ttttactcac tgcctgtgaa
      961 gggggggaac ccttgcctga cacaatggtg attgatgaca agttagttaa tatggatgaa
     1021 cgggaaacta tttggggcga cagcggtgga ttaaccttag gcggtgactc aaattctaat
     1081 actggcgccg ggcccagtat tggtgttaac gcttttttgt ggcgggcaac cttggatacg
     1141 atgtccgttt ggccgattaa ctcagccgac ccgttcggtg gcgttgttat aacggattgg
     1201 tatgcgccgc cgacgacgcc aaatgagcgc tttaaaatga atatttatat tttggaccgg
     1261 gcgttgcgcg ccgatggcgt tcgtgtctcc gttttccggc aggttaaaaa cacggttggt
     1321 gattggcagg atgcgattgt gcagccgacc accgcaacca agctggaaaa tgccattctg
     1381 atgcgcgccc ggcaatttcg caatcgcacc aatcaataac acggttaatt tctgagcttg
     1441 ctaaattgcg tcgcaaatgt gtatgaagcg gcgtattttt tttctctacc aaactttcat
     1501 tctctgagga gacagtaagc tagaatggcc cgctacaatt tcaaagaagc ggaaccccgc
     1561 tggcaaaaat tatggcacga caagaaatgt tttgaagttt ccgaagccga tgatttgccc
     1621 aaatattatg tcctcgaaat gtttccctat ccatcgggcc gcattcatat gggccatgtt
     1681 cgaaattata ccctcggaga tctcgtcgcc cggtataaaa aagcgcgcgg gttcaatgtc
     1741 ttacatccaa tgggatggga tgctttcgga ctgccggccg aaaatgcggc gatcgcaaac
     1801 aatgttccgc cagccgaatg gaccgagcaa aatatagcga ccatgcgggg tcagctaaaa
     1861 tcgatgggcc tgtcttatga ctggaccaga gaaattgcaa cctgcatgcc tgaatattac
     1921 gcccatgaac agaaaatgtt tttggatttc atcaaggccg gattagccta ccgcaaagaa
     1981 tctt
//
LOCUS       DASCNL010000840         3232 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001732743, whole genome shotgun sequence.
ACCESSION   DASCNL010000840 DASCNL010000000
VERSION     DASCNL010000840.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001732743"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>3232
                     /locus_tag="QF359_11055"
     CDS             <1..>3232
                     /locus_tag="QF359_11055"
                     /inference="COORDINATES: protein motif:HMM:NF009588.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HJO87491.1"
                     /translation="RFQAGVNEDMAATACWGTQQVGIWQSATEQAKYDGVFAVWYGKG
                     PGLDRSGDALKHGNLAGTSANGGVLILAGDDQGAKSSTTAHQSEQALIAAMTPILYPA
                     SVQEYIDYGLMGFAMSRYSGCWTGFKCAGDIIESSSSVSVELDRLDIKQPTNFEFPED
                     GVHIRWPDGPIEQEKRLISVKLKAAQAFVRENWLDRISHETSKKRLGIVAPGKAWLNV
                     GQAFDELDLSDAERQEIGIGVFKVAMPWPLEPTRIRAWAAGFDEILVVEEKRNLIEDQ
                     LARILFNLPEEQRPRLVGKKDESSNLLVPEYGELNGTIVAQVIANRFLEEGETNCLVS
                     AAASIKARTADSNRPAAPPERSPWFCAGCPHNSSTLVPEGSRALAGIGCHTMAVYMDR
                     RTAAYTHMGGEGGTWIGQAPFTTAKHVFQNIGDGTYYHSGLMAIRAAVSSGVNITYKI
                     LFNDAVALTGGQPMDGELYPWTISKQLAAEGVGHIAVVSDEPEKYPDNLDWAPQAEIH
                     HRRELEKLQLEMRKIEGVTVIIYDQTCAAEKRRRRKRGLYPDPARRVFINDAVCEGCG
                     DCNTVSNCVAIRPLETPLGRKRIVDQSSCNKDFSCLDGFCPSFVTVEGGALRISEPPV
                     VDRANPAADLPDPTPAKINGSYNILLTGIGGTGVITVGATLGMAAHIEGKGCAVLDQT
                     GLAQKNGAVMSHVSISSDLDTVLATRIGTGMSDLVIGFDMVVAAGQAAVNTMSTTRTR
                     AVINDHLVPLAAFAEQPDMPLESGGYTNVIETVLGDDSAEFFDATQLVAKLLGDTIST
                     NVFLLGFAYQKGYLPLQAVSIEEAIRLNNVAVEMNLRAFAWGRVAADDPDRLAGLTGT
                     SDQSAEPEFDLEQFIEDRKQDLTAYQNAAYAMHYSEVIAKVHLTEEKVDPGRINLTAA
                     AAGALYKLMAYKDEYEVARLFTDGRYIKKLQALFEGDYQLKLHFAPPLFAAKDRVTGQ
                     PLKKEYGAFMWWVLKLLALFKILRGTPLDPFGYLAERKTERALIRNYEKMLDDIVAGL
                     TPDNYETTVELASLPLQVRGFGYVKSRALKEAKAGEIRLLAEFRKSD"
BASE COUNT          756 a          796 c          907 g          773 t
ORIGIN      
        1 cgcttccaag ccggcgtcaa tgaggatatg gcggcaaccg cgtgctgggg cacgcaacaa
       61 gtcggaatct ggcagtcggc caccgagcaa gccaaatatg atggggtgtt tgcagtctgg
      121 tatggtaaag ggccggggct agaccgttcc ggtgatgcgc tcaaacatgg caatctcgcc
      181 ggtacttcag cgaatggcgg tgtgttgata ttggccggtg atgatcaagg ggcgaagtca
      241 tcaacaaccg cgcatcaatc cgagcaagcc ctgattgcgg cgatgacccc tatcctttat
      301 ccggcaagtg ttcaggaata tatagactac ggtttgatgg gtttcgccat gtcgcgctat
      361 tcgggctgct ggaccggttt taaatgtgcc ggcgatatta tcgaaagctc atcctcggtg
      421 tcggtcgagt tggatcgtct cgatattaaa cagcccacta attttgagtt tcccgaagac
      481 ggtgttcaca tccgctggcc tgatggacca attgagcagg aaaagcgcct gatctcggtc
      541 aaactcaaag cggcgcaggc ctttgtgcga gaaaactggc ttgatcgtat ttctcatgag
      601 acgtcaaaaa aacggcttgg tatcgttgcg ccgggtaagg cctggctcaa tgtcggtcag
      661 gcgtttgatg aactagatct gagcgatgcg gaacgccagg aaatcggcat tggtgtgttt
      721 aaagtcgcca tgccgtggcc acttgagccg acacgcatcc gtgcttgggc ggcgggcttt
      781 gatgaaattc tggtcgtcga ggaaaagcgt aatctaatcg aagaccaact cgcccgcata
      841 ttgtttaatc tgccagaaga gcaaagacca cgcttggtcg gcaaaaaaga tgagagcagc
      901 aatttgctgg tgcccgaata tggtgaactc aatggcacca ttgttgcgca agtgattgct
      961 aatcgatttt tagaggaggg cgagaccaac tgtctggttt ccgctgccgc ttcgattaag
     1021 gctcgcactg cagacagcaa tcgcccggca gcgccaccgg aacgctcgcc ctggttctgc
     1081 gccggctgtc cgcataattc ttcaacattg gtgcccgaag gcagccgcgc gctggccggt
     1141 atcggctgtc acacaatggc ggtttatatg gatcgccgaa ccgccgctta tacccacatg
     1201 gggggtgagg gcggtacctg gatcggccag gcgccattca cgacggccaa acacgtcttt
     1261 caaaatatcg gcgacggtac ctattaccat tccgggctga tggcgatccg ggcggcggtc
     1321 tcgtccggcg tcaatattac ctataaaatc ttattcaacg acgccgtggc tctgaccggt
     1381 ggtcagccga tggatggtga gctttatccc tggacaatct ccaagcaact tgccgctgaa
     1441 ggggttgggc acattgccgt cgtttccgac gagccggaaa aatatcctga caatttggat
     1501 tgggcaccgc aggctgaaat tcaccaccgc cgcgagcttg aaaaattgca attggaaatg
     1561 cgcaagatcg agggcgtcac ggtaattatt tatgatcaaa cttgcgccgc cgagaaacgc
     1621 cgccgccgca agcgcgggct ttatccagat ccggcgcgcc gggttttcat taatgatgcg
     1681 gtctgtgaag gctgtggcga ttgcaatacg gtatcgaatt gtgttgccat tcgcccactt
     1741 gaaacgccgc tgggccggaa acgaattgtc gatcagtcat cttgtaataa agatttttct
     1801 tgcctcgatg ggttttgccc gagctttgtt accgtcgaag gtggggcttt aagaatatca
     1861 gaaccgccag tcgttgatcg tgctaatccc gccgctgacc tgccggaccc gacgccagca
     1921 aaaattaatg gctcgtacaa tattttgctg actgggatcg gtggcaccgg cgtcatcact
     1981 gtcggtgcga cattgggcat ggcggcgcat attgaaggca aaggctgtgc ggttttagat
     2041 caaaccgggc tcgcccaaaa aaacggcgcg gtgatgagcc atgtttcgat atcaagtgac
     2101 ctagacacgg tattggcgac ccggattggc actggcatga gcgatctcgt tattggcttc
     2161 gacatggttg tcgctgccgg tcaagctgcg gttaatacga tgagcacgac gcggacacgg
     2221 gccgttatta atgatcattt ggtgccgctg gcagcattcg ccgaacagcc cgacatgccg
     2281 ctggaatcag gtggttatac caatgtcatc gaaactgtac tcggcgacga tagcgctgag
     2341 ttttttgatg cgacccaatt agtggcaaaa ttgcttggcg acactatttc aacgaatgtg
     2401 ttcctgctcg gtttcgccta tcaaaaaggc tatctgccgt tgcaggcagt atccatcgaa
     2461 gaggctattc gtctcaacaa tgtcgcagtg gagatgaatt tacgcgcttt tgcctggggc
     2521 cgggtcgcag cggatgatcc agaccgattg gctggattga ccgggacgtc tgatcaatca
     2581 gccgaacctg aattcgatct tgagcaattt attgaagacc gcaagcaaga cctcaccgcc
     2641 tatcaaaatg cggcttatgc catgcactat tctgaggtga ttgccaaggt gcacttaacc
     2701 gaggaaaaag tcgacccggg tcgcattaat ttaaccgcag cagcggcagg cgcgctttac
     2761 aaattgatgg cttacaaaga tgaatacgaa gtggcgcggc tttttaccga tggtagatac
     2821 attaaaaaac tgcaagctct gttcgaaggt gattaccagc tcaaacttca cttcgcgccg
     2881 cctctatttg ccgctaagga tcgcgttacc ggccagccct tgaagaaaga atatggtgca
     2941 tttatgtggt gggtgttgaa attgttggcg ctgttcaaaa tactacgcgg tacgccgctc
     3001 gatcccttcg gctatttggc ggaacgtaaa acagaacgcg ccttgatcag gaactatgag
     3061 aagatgttgg atgatattgt tgctggcctg acgccagaca attacgaaac cactgttgaa
     3121 ttggcttctt tgccgttgca agtacgtggt tttggttatg ttaaatcccg cgctctcaag
     3181 gaggccaaag ccggagaaat tcgtttgctg gcggagttta gaaaatccga tg
//
LOCUS       DASCNL010000841         1595 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001733755, whole genome shotgun sequence.
ACCESSION   DASCNL010000841 DASCNL010000000
VERSION     DASCNL010000841.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001733755"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(201..>1595)
                     /gene="gatB"
                     /locus_tag="QF359_11060"
     CDS             complement(201..>1595)
                     /gene="gatB"
                     /locus_tag="QF359_11060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HJO87492.1"
                     /translation="VHAQIISKAKLFSSAATEFGAEPNSQVSLVDAAMPGMLPVINEV
                     CIGQAVRTGLGLNARINLHSVFERKNYFYPDLPQGYQISQFLEPIVGEGVITLDMPEG
                     PRDIGVERLHMEQDAGKSLHDQDPKRTFIDLNRSGIALMEIVSKPDLRSPAEAGTYMR
                     KLRAIVRYLGTCDGNMEQGSLRCDANVSVRPVGEKELRTRTEIKNINSVRFVMAAIEY
                     EAERQVKIYEDGGSVVQETRLYDANKGETWNMRSKEEAHDYRYFPDPDLLPVDLTQEF
                     VDEIKASLPELPDAKKQRFVNDFGVAVNDAATLVADKETADYFEAVADSGDAKLAANW
                     IIQELFAVLNKDSLGIAESPVSSDDLGKLVGLIADNTISGRIAKDVFEVMVTEGGDPA
                     QIVENKGLKQITDTGEIEAMIDALINDNPDQAQQYRDGNTKVTGWFVGQMMKATGGKA
                     NPQMVNELLKKRLG"
BASE COUNT          352 a          454 c          392 g          397 t
ORIGIN      
        1 tagttcgtcg acgactgctt gttcgatgcg cttgccggta caggagacaa aagtaccgtc
       61 atcatcgacg gtcgccatat cacagaaaat ttcgaggcgg tggccatccg ggtcaagccc
      121 gcgcatgacg gaatttcggt gacagtttac ttaactcgaa ttatcgggga cacgtaacaa
      181 gcacatgtct ccctttaacc ctaccccagc ctcttcttca aaagctcatt gaccatttgt
      241 gggttggctt tgccgcccgt ggctttcatc atctggccga cgaaccagcc ggtgactttg
      301 gtattgccat cgcggtattg ctgggcttgg tcaggattat cattgatcag cgcatcaatc
      361 atggcttcga tctcaccggt gtcggtgatc tgtttgagac ctttgttctc gacgatttgt
      421 gccggatcac cgccctcggt gaccatcact tcaaaaacat ccttggcgat gcggcccgag
      481 atcgtattat cggcgatcaa gccgaccagc ttgccgagat catcggatga caccgggctt
      541 tcagcaatgc ctaagctgtc tttgttaagc acagcaaaca attcttggat gatccaatta
      601 gcggcgagct tggcatctcc gctgtcggcc acggcttcaa aataatcagc ggtttctttg
      661 tcagccacga gcgttgccgc atcattgacg gcgacaccaa agtcattgac aaagcgttgc
      721 ttcttggcgt ccggcagttc tggtaaactt gcttttatct cgtcgacgaa ttcctgggtc
      781 aagtcaaccg gcagcaaatc cgggtccggg aagtagcgat aatcgtgcgc ttcttctttc
      841 gagcgcatgt tccaggtctc gcccttattg gcatcataga gccgggtttc ctgaaccacg
      901 ctgccgccat cttcatagat tttgacctga cgctcagcct catattcaat tgccgccatg
      961 acaaagcgaa ccgagttgat gttcttgatc tcagtccggg tgcgcaactc tttctcaccc
     1021 accgggcgga cactgacatt ggcgtcacaa cgcagcgagc cctgctccat attgccgtca
     1081 caagtaccga gataacgcac aatcgcccgt aattttcgca tataggtgcc ggcttccgca
     1141 gggctcctaa gatcaggctt ggagacaatc tccatcagcg cgatacctga gcggttgaga
     1201 tcaataaacg tgcgcttcgg gtcctgatca tgcagcgatt taccggcgtc ctgttccata
     1261 tgcaggcgct cgacgccgat atcgcgcggc ccttccggca tatccagcgt aatcacgcct
     1321 tcaccgacaa tcggttccag aaactgcgaa atttgatagc cctgcggcag atcgggataa
     1381 aaatagtttt ttcgttcaaa caccgaatgc agattaatcc tggcgttgag ccctagcccc
     1441 gtacgtactg cctgcccaat acaaacctca ttgatcaccg gtagcatgcc cggcatagcc
     1501 gcatcaacca gcgacacttg gctgttgggc tcggcgccaa actcggtggc agcgctggag
     1561 aataattttg ccttggaaat gatttgcgcg tgaac
//
LOCUS       DASCNL010000842         1584 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001734939, whole genome shotgun sequence.
ACCESSION   DASCNL010000842 DASCNL010000000
VERSION     DASCNL010000842.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001734939"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            302..601
                     /locus_tag="QF359_11065"
                     /pseudo
     CDS             302..601
                     /locus_tag="QF359_11065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007677524.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(624..1298)
                     /locus_tag="QF359_11070"
     CDS             complement(624..1298)
                     /locus_tag="QF359_11070"
                     /inference="COORDINATES: protein motif:HMM:TIGR01656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HJO87493.1"
                     /translation="MPPNNYVSYITEDNVWSQVIADRSSTAGHPALFLDRDGTIVEEV
                     NYLHRPEDIAFIPGAIDVIHKANQLEIPVVIVTNQAGIGRQYYDWPQFIEVQKKLLTV
                     LFDEGASIDAVFACPHHIDARAPYFHKDHPWRKPNPGMLLAAQEEMGVDLSGSWIAGD
                     RAVDVRAGLNAGFAGGIHLQTGHGIREMEREASLAQATKDFRVISVNTIAELLTALPL
                     FKQRLH"
     gene            1397..>1584
                     /locus_tag="QF359_11075"
     CDS             1397..>1584
                     /locus_tag="QF359_11075"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the dehydration of
                     2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate
                     in valine and isoleucine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HJO87494.1"
                     /translation="MSDEKKPSLHSRVTTDGLDRTPHRAFLRGMGLDDEAIAKPFIGV
                     VTAAGETTPCVMNLAPQAT"
BASE COUNT          401 a          380 c          388 g          415 t
ORIGIN      
        1 tggggtataa cgtatgaatt acataattcc gacgctactt tttatctatt ttaaattaaa
       61 ttctataata aaaaactcgt aatcgttgat taaaagaata gaacttctcc gccgaaactt
      121 gagccactac cttagttaaa tttcgccaaa aacagcaatc ttccaaccat cacaacagtt
      181 tcacttttac ttaagcctct atttcccaga taggttgtta tattactaat tttttcggct
      241 gattctgctc taagaatcaa tgtaatatac acattagtac ggacgcgctc cgtgtcaccc
      301 agcgggtgaa agcagacatt cccctttacg ggttgatttt gaccgccgtt tgaagttgga
      361 atttcacggt tccaagatca ccaccgacgg cggtatgctt gtctatcgag agcttgacga
      421 agcccttggc ttgaccgagg ttgccggaga tgttttccaa gacaaccgta ccagcaagaa
      481 cggatggcac ggcatgacgg gtcaatttca ccaatcggta tttggacgat ttggcggtta
      541 tgctgatgta aacaacgccg accgtctcgg atgtgatccc gccttgtggt ggattgtcgg
      601 tgtcgttcac attatttagt taactaatgc agtcgctgtt taaatagcgg taatgccgtc
      661 agcagttcgg caatcgtgtt caccgatatc accctaaaat ccttggtcgc ttgcgccaga
      721 gatgcttcac gctccatttc gcggatgcca tgcccggttt gcagatgaat gccaccagcg
      781 aagccggcat ttaagccggc acggacatca acggcgcggt caccagcaat ccaggagccg
      841 ctcaagtcga ctcccatctc ttcttgagcc gccaataaca tgccaggatt gggtttgcgc
      901 cacggatgat ctttatgaaa atagggagcc cgggcatcga tgtgatgggg gcaggcaaag
      961 acagcgtcga tcgaagcacc ttcatcgaat aacacggtca gcaatttctt ttggacctcg
     1021 ataaactgcg gccagtcata atattgacgg ccaataccgg cctgattggt aacgatgaca
     1081 actggaattt caagttgatt ggccttgtgg ataacatcaa tggcgcccgg gataaaggcg
     1141 atatcctccg ggcggtggag ataattaacc tcttcaacga tggtgccatc acgatcgaga
     1201 aatagggccg ggtggccggc ggttgaactc ctatccgcga tgacctggga ccaaacgtta
     1261 tcctcggtga tatatgacac atagttatta ggtggcatgt tacgtctggt tcccggatgt
     1321 ttgtgcacaa gcttgacaat aggcgttttt gccgatgtcc tctagactat gacgtatatt
     1381 ttttaagagg caattaatgt ctgacgaaaa aaagccatcg ctgcactcgc gggtgaccac
     1441 agacggtttg gatcgcacgc cgcatcgagc ctttttgcgc ggcatgggac tggatgatga
     1501 ggctattgcc aagcctttca ttggtgtggt gacagcggcc ggagaaacca cgccttgtgt
     1561 catgaatcta gcgccgcaag cgac
//
LOCUS       DASCNL010000843         1101 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001735872, whole genome shotgun sequence.
ACCESSION   DASCNL010000843 DASCNL010000000
VERSION     DASCNL010000843.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1101)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1101)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001735872"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(52..567)
                     /gene="mreD"
                     /locus_tag="QF359_11080"
     CDS             complement(52..567)
                     /gene="mreD"
                     /locus_tag="QF359_11080"
                     /inference="COORDINATES: protein motif:HMM:NF016019.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HJO87495.1"
                     /translation="MSIAFWQKLDQTVRSITPFGLSLLLVILSVAPTYIPGYAQIAPI
                     LALVSIYHWAIYRPNLLPLFAVFILGLLQDLLTGTPPGLYVLVFLTVYGVVLSQRRFF
                     TGKSFTIYWFGFAVVSLVASVESWVFGSVLNFALLDFNAVTFQYLLSLGIFPIIAWIF
                     LRWQQAFLRQE"
     gene            complement(564..>1101)
                     /gene="mreC"
                     /locus_tag="QF359_11085"
     CDS             complement(564..>1101)
                     /gene="mreC"
                     /locus_tag="QF359_11085"
                     /inference="COORDINATES: protein motif:HMM:NF016011.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HJO87496.1"
                     /translation="DKNANYVSARVIAGSGGAFANMLIVNAGEIDGVRKGQVVISDRG
                     IIGRISGVSNRSARVLLITDINSRIPVLIENNRTRAIMTGTNTSRTKLIHLPPGARVT
                     PSDRIITSGHGGAFPSGLPVGVVASVSDGGIEVQLFADHAKLEFVRIADFGLKGLVDM
                     SVQKNSLKHKAGGRTGKK"
BASE COUNT          330 a          275 c          259 g          237 t
ORIGIN      
        1 cgagcgccgt gaaaaagttt tatatctgtc actgtctcgg tgcatggcga attattcctg
       61 ccgtaaaaac gcctgctgcc agcgtaaaaa tatccaggcg atgatcggaa atatccctaa
      121 tgatagcaaa tattgaaacg tcacggcatt aaaatccaat aacgcaaaat tcaagacgga
      181 gccgaatacc cagctttcaa ccgaggcaac cagggaaacc acggcaaagc caaaccagta
      241 tatggtaaag gatttaccgg taaaaaaccg ccgctgggaa agtaccacgc cgtagaccgt
      301 tagaaaaacg aggacataga ggccgggagg tgttccggtc aacaaatcct gcagcaaccc
      361 caaaataaaa acggcaaata atggtaatag attgggccgg taaatggccc agtgataaat
      421 cgataccaaa gcgagaattg gtgcgatctg ggcgtagcct ggaatataag tgggtgcgac
      481 actcaaaata acgagaagaa ggctcaatcc aaatggcgta atagaccgca ccgtttgatc
      541 aagtttttgc caaaaggcaa tgctcatttt ttaccggttc taccgcctgc cttatgcttt
      601 aaagaatttt tttgcacgct catatcaact aatcccttta aaccaaaatc agcaatgcga
      661 acaaattcca gtttggcgtg gtcagcaaat agttgaactt caatgccacc atcgctaacc
      721 gaagcaacaa cgccaaccgg caagccggat gggaaggcac ctccatgtcc cgacgtaata
      781 atcctatcac tcggcgtcac gcgcgcaccc ggtggcaagt gtatgagctt ggtccggctg
      841 gtgttggtgc cggtcatgat cgcccgggtc cggttgtttt cgattagcac gggaatacga
      901 gaattgatat cggtgatcag taagacgcgg gccgagcggt tcgatactcc cgaaatccgg
      961 ccaatgattc cgcgatcact aatcactacc tgacctttgc gaacgccatc aatctcgccg
     1021 gcattgacga tcagcatgtt ggcaaaggct ccgccagaac cagcaatcac ccgtgctgaa
     1081 acataattag cgtttttgtc a
//
LOCUS       DASCNL010000844         1478 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001737535, whole genome shotgun sequence.
ACCESSION   DASCNL010000844 DASCNL010000000
VERSION     DASCNL010000844.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1478)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1478)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1478
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001737535"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1155
                     /locus_tag="QF359_11090"
     CDS             <1..1155
                     /locus_tag="QF359_11090"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO87497.1"
                     /translation="QPIGPALDTKIEQAQAAKIVPDISPDDDAMLFYTGGTTGRSKGV
                     RLSHWNIISCGLAFGLSVGARADDVYLHVAPMFHSADLIGTAWFLNGATHCYLPAFSP
                     AGFLQCIADNQVSVTVTVPAMLMAVVGSVKVTDFDITSLRVLMYGASPMAFEWTERVA
                     AAFPDTDFLNCYGLTETAPDLTIFDADEFRAAIESGERNGIVTSVGKPNVLIDLRVVG
                     DDDKDVTPGEVGELWARGPNIMKGYLNLPEETSAAISDGWLHTGDMARIDEKGYVYLL
                     DRLKDLVITGGENVYSSEVEAALHRHPAVSEAAVIGLPDDKLGEALFAVIVLRPDAEA
                     PAKITDEDLITHCRDLIGGYKIPRQYAFTDALPKSALGKVLKADLREQYS"
BASE COUNT          349 a          388 c          382 g          359 t
ORIGIN      
        1 caacccatcg ggcccgcatt agacaccaaa atagagcagg ctcaggcggc taaaatagtt
       61 ccagatatta gccccgacga tgatgccatg ctgttctaca ccggcggcac caccgggcgc
      121 agcaaaggag tccggctgag ccattggaac atcatctcct gtggtctggc cttcggtttg
      181 agcgtcgggg ccagagcgga tgacgtctac ctccacgttg cgccgatgtt tcactctgct
      241 gaccttatcg gcacagcttg gtttctaaat ggtgccacgc attgttattt gccggccttt
      301 tcacccgccg gatttttaca atgtattgcc gacaatcagg tgagcgtcac ggtaaccgtg
      361 ccagctatgc tgatggctgt cgtcggtagc gtgaaagtaa cagatttcga tatcacctct
      421 ttacgcgtgc tgatgtatgg cgcctcgcca atggcctttg aatggaccga gcgggttgcc
      481 gcagcctttc ccgataccga ttttctaaac tgctatggtc tgaccgaaac cgcgccggat
      541 ttaaccattt ttgatgccga tgagtttcgc gccgcgatcg aaagcggcga gcgcaacggt
      601 attgtcacct cggtcggaaa acccaatgta ctgatcgatt tgcgggttgt tggtgacgat
      661 gataaagatg tcacgccggg tgaagttggc gagctgtggg cacgcggccc caacattatg
      721 aagggttatc tcaacctgcc tgaggagacc agcgccgcca taagtgatgg ctggctgcat
      781 accggtgata tggccaggat tgatgaaaag ggttatgtct atctcttgga ccgcctgaaa
      841 gatctggtca tcaccggcgg cgagaacgtc tattcctcgg aagttgaagc cgcactgcac
      901 cgtcatccgg cagtcagcga ggcggcggtc atcggccttc ccgatgataa gctcggcgaa
      961 gcgttgtttg cggttattgt tttgcgcccg gatgcggagg cccctgcaaa gattactgac
     1021 gaagacctca tcacccattg ccgggattta atcggtggct acaaaattcc ccggcaatac
     1081 gcttttaccg atgccctgcc caaaagcgcg ctaggcaaag ttttaaaagc agacctcaga
     1141 gagcaatact cttaacatgt tctgctcaca ttaaactaac cagattcagc aaattggttg
     1201 ttggatgata taaccccaac cgtaatattt atcccaaccc ttcccaaggc accttatcgc
     1261 catcaatcaa gaaatagacc acacccaagg tttatcggat tttaagggtc taatcagaaa
     1321 gcattgtcgc acatcgacca gcaaaaccgg tagttttttc cgcgaagcta taggttggat
     1381 tggtgtttct aaatcttgcg accgcggggt aaaaaaatgg cctggtcgat tctggtgtgg
     1441 atttgactca tcctgcctta aaaggccagc gaatcacc
//
LOCUS       DASCNL010000845         1088 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001738487, whole genome shotgun sequence.
ACCESSION   DASCNL010000845 DASCNL010000000
VERSION     DASCNL010000845.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001738487"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..838
                     /locus_tag="QF359_11095"
     CDS             <1..838
                     /locus_tag="QF359_11095"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87498.1"
                     /translation="GFKWTYHFFWGFHDMFGVFQNMWNALGTNKVVGSVIANDSDGVN
                     AGHPKRGFRAPIEAGGFKYNQPPLFQPGTNDFTAQITQFKKLGVEVLTGVFVPPDFST
                     FWTQAAQQGLTKQLKAATIAKALLFPPAIEALGDRGAGLTTEVWWSPNHPFKSNLTGK
                     TSGQYAAAYTAATGKQWTQPLGFKHANIEVAIDVLKRCGDPGDPNAILKAIETTDYQS
                     IVGPVSWKKGSPLSPMKNVCRTPLVGGQWKPGKKFKYDLIIVDNKLAPNIPVGGKIDS
                     IN"
     gene            997..>1088
                     /locus_tag="QF359_11100"
     CDS             997..>1088
                     /locus_tag="QF359_11100"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO87499.1"
                     /translation="MHLDKGEALGIIGPNGAGKSTLFNLITGSLA"
BASE COUNT          261 a          286 c          280 g          261 t
ORIGIN      
        1 gggctttaaa tggacctatc atttcttctg gggcttccat gatatgttcg gtgtgtttca
       61 gaatatgtgg aatgcgctgg gaaccaacaa agttgtcggt agtgtcatcg ccaacgattc
      121 cgatggcgtc aatgcgggcc atcccaagcg cggtttccgg gcacccatcg aggccggtgg
      181 tttcaaatat aatcaaccgc cactctttca accgggtacc aatgacttca ccgcgcagat
      241 tactcaattt aaaaagcttg gcgtagaagt tttgaccggc gtttttgtgc cgccggattt
      301 ctcgactttc tggacccagg cagcgcagca agggctgacc aaacaactca aagcggcgac
      361 catcgctaaa gcgctgttgt tcccaccggc catcgaagct ttgggtgatc gtggtgccgg
      421 cctgaccacc gaagtctggt ggtcgccgaa tcatccgttc aaatcgaacc tgacgggtaa
      481 aacctctggt caatacgctg ccgcctacac ggctgcaact ggcaaacaat ggacccagcc
      541 gcttggcttc aagcacgcca atatcgaggt cgccatcgac gttctcaaac ggtgtggaga
      601 tccgggcgat cccaacgcta tcttgaaggc catcgaaact acggattacc aatccatcgt
      661 cggaccagtc tcctggaaga aaggcagccc gctcagcccg atgaaaaatg tttgccggac
      721 gccgctcgtt ggcggtcaat ggaaaccggg caagaagttc aaatatgatc tgattatcgt
      781 cgataataag ctggccccca atattcctgt cggcggtaaa atagattcca ttaactagcg
      841 gttagcggaa ttcattttgg ggtggtgcgc gttgttgatt aactgtgcac cgccccgttt
      901 tattggaata ggcatgaaac gatcatgacc gcgttattga cgactgaaaa tttatccaaa
      961 agcttcggct ctctgctggt tatcgattcc tttcatatgc atctggataa aggggaggcc
     1021 ctgggcataa tcggtccgaa tggcgctggt aaaagcacgc tattcaatct gatcaccggc
     1081 agcctcgc
//
LOCUS       DASCNL010000846         1399 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001745535, whole genome shotgun sequence.
ACCESSION   DASCNL010000846 DASCNL010000000
VERSION     DASCNL010000846.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1399)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001745535"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1397)
                     /locus_tag="QF359_11105"
     CDS             complement(<1..1397)
                     /locus_tag="QF359_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HJO87500.1"
                     /translation="MADKLDQEALDYHCLPTPGKVAVVPTKPLANQHDLSLAYSPGVA
                     AASKLIHDDPAEAANMTSRANLVAVVTNGTAVLGLGNIGALAAKPVMEGKAGLFKKFA
                     GIDVFDIEVDETDPEKFVDIVASLEPTFGGINLEDIKAPECFVIEAALKERMNIPVMH
                     DDQHGTAIIVGAAILNGLKVVGKKIDDVKLVVSGAGSAALACLDLLVKLGVKKKNIFV
                     SDIAGVIYEGRTEEINDYNVRYAQKTDTRTLGDVIDEADVFLGLSAPGILKPTMVKKM
                     AARPLILALANPEPEIWPEAVKKVRDDAVMATGRSDYPNQVNNVLCFPFLFRGALDVG
                     ATVINDEMKMACVKALVKLAEAESDETVVQAYGLQELNFGPEYLIPKPFDPRLMAKIA
                     PAVAKAAMDSGVTTRPIEDFKAYNQKMLEFVVRSGYVMKPVFDQARENPKRVVYADGE
                     SQRVLRAVQNGVDSL"
BASE COUNT          337 a          386 c          328 g          348 t
ORIGIN      
        1 aacaaactat caacaccgtt ttgcacggcg cgaagcaccc gttgggactc tccatcggca
       61 tagacaacac gttttggatt ttcccgcgcc tgatcaaata cgggtttcat cacatagccg
      121 gaacggacaa cgaactcgag cattttctgg ttgtaggcct tgaaatcttc aatcgggcgt
      181 gttgtcacac ccgaatccat tgccgccttg gcaacagctg gcgcgatttt cgccatcaac
      241 cgcggatcga aaggtttggg aataagatat tccgggccaa aatttagctc ttggaggcca
      301 taggcttgaa cgaccgtttc atcggattct gcttccgcta gcttcaccaa ggctttgacg
      361 caggccattt tcatttcatc attgatcacc gtcgcgccga catcaagcgc accccgaaac
      421 aggaacggga aacacagcac gttgttaact tgattgggat agtcagagcg gccggtagcc
      481 atcactgcat catctcgcac tttttttact gcttcgggcc atatttcagg ttccggattg
      541 gcgagcgcca aaatcagtgg gcgcgcggcc atctttttaa ccatcgtcgg cttgagtatg
      601 cccggagctg agagacctaa aaaaacatct gcctcgtcga taacatcgcc aagagttcgc
      661 gtatcagttt tttgcgcgta acgcacgtta taatcattga tctcttccgt tcgtccttca
      721 tagatcacgc cagcaatatc ggagacgaag atatttttct ttttaacccc cagtttgact
      781 aatagatcga gacacgccaa cgccgctgat cccgcccccg aaacaaccag ctttacgtcg
      841 tcaatttttt tgccgacaac tttgaggcca ttgaggatcg ccgcaccgac aatgatggcc
      901 gtgccatgct gatcatcatg catcaccggg atgttcatgc gttcctttaa cgcagcctca
      961 atgacgaagc actcgggagc cttaatgtct tccaaattga tgccgccgaa agtcggttcc
     1021 agggaagcaa caatatccac aaatttttcc ggatcggttt cgtcgacttc aatatcgaat
     1081 acatcaatgc cggcgaactt tttaaacaag ccggctttcc cttccatcac cggtttagca
     1141 gctagtgcgc cgatgttacc aagccccaaa acagccgtac catttgtgac caccgcaacc
     1201 aaattggctc gggaagtcat attggcggct tcggctggat cgtcatggat caacttcgag
     1261 gcggctgcta cgcccggcga ataagctaaa gagagatcgt gttgattggc gagcggcttg
     1321 gtcggcacca ctgcgacctt acctggcgtg ggcaagcaat gataatcaag cgcctcttgg
     1381 tctagtttgt cggccacag
//
LOCUS       DASCNL010000847         2391 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001750908, whole genome shotgun sequence.
ACCESSION   DASCNL010000847 DASCNL010000000
VERSION     DASCNL010000847.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001750908"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            132..836
                     /locus_tag="QF359_11110"
     CDS             132..836
                     /locus_tag="QF359_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO87501.1"
                     /translation="MSDFSEAFAAALALILNFESSLAEIVGLSLQVSLVAVFIASLIG
                     LPLGAALAVFRFPGRKTLVVILNALMGLPPVVVGLIVYLILSRSGPLGTLGLLFTPTA
                     MIIAQTLLIMPIIAALTRQSTVQLWHEYEDQFKSLGAGPGETVTALLWDDRFNLVTTI
                     LAGFGRASAEVGAVMIVGGNIDHVTRVMTTTIALETSKGNLALALGLGVILLCLALGV
                     NAAAYLINEAALKRHG"
     gene            829..1620
                     /locus_tag="QF359_11115"
     CDS             829..1620
                     /locus_tag="QF359_11115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HJO87502.1"
                     /translation="MDKANNTDILPLELKDVNFEVGGMRLIKDMTLTLNAGSSTIILG
                     PNGAGKSLLLRICHGLITPNSGSILWRGPSRNEAGIYQAMVFQRPVMLRRSVAANLHF
                     GLKSRGTPKAERDRIIDDMLQITGLTRLARSPARALSTGEQQRLAIARAWSLKPEVLF
                     LDEPTANLDPAATHAIEETIASIKQSGTKIIMSTHDLGQAKRLADNVLFLYRGRLLEN
                     AVAADFFNRPKNDLAQAFLKGELLWWNRKELKTPAELKHRDVLKK"
     gene            1617..>2391
                     /locus_tag="QF359_11120"
     CDS             1617..>2391
                     /locus_tag="QF359_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HJO87503.1"
                     /translation="MKIAVRLIAVWSVLAGLIHTSSLIAAEQSIERFIVMASTTSTVN
                     SGLFDYLLPKFSNKFKMQIRVVGVGTGQALRIARRGDADVLFVHHKESELAFVRDGFG
                     VKRLNVMYNDFIIVGPQVDPAKIKKTKTAAAAYQAIAQSRAVFVSRGDDSGTHKKSLA
                     IWQAAISTKPKSAIWYRESGAGMGATLNIASSMEAYTLTDRATWENFNNKTTLKILFE
                     NDPLLQNQYGIIKVNPALHKHVKSQEAEIFIKWVLSAEGQ"
BASE COUNT          609 a          592 c          600 g          590 t
ORIGIN      
        1 ttaaattatt ttgtatccac gcaatatatt tgccataaat cagataacgg aaatggtgtt
       61 gatatagtat ggagaaaagg ctcataaata ttcggagcaa aaaccactga acacccgggt
      121 aacgcataga tatgtctgat ttcagcgaag cattcgcggc ggcgttagcg cttatattaa
      181 actttgaaag cagtttggcg gagattgtcg gactgtcttt gcaagttagt ctggtcgcgg
      241 tatttatcgc cagtctaatc ggcctgcctt tgggcgcagc gctggccgtc ttccgctttc
      301 cggggcgtaa gaccttggtg gttattttaa acgcactgat gggactgccg ccggtggttg
      361 tcggcttaat tgtctacctt atactgtcgc gttcgggacc gctcggcaca ctcggtctgc
      421 tattcacgcc gaccgcgatg ataattgccc aaacactact gatcatgccg attattgccg
      481 cgttgacccg gcaatcgacg gtacagctgt ggcatgaata tgaagatcag ttcaaatctt
      541 taggcgccgg acctggcgaa acggtaaccg cgctattgtg ggatgatcgg tttaacctcg
      601 tgacaacgat cctggctggc tttggccgcg ccagcgccga ggtcggcgcg gtcatgattg
      661 ttggcggtaa cattgatcat gtgacccggg ttatgacgac cacaatcgca ctcgaaacca
      721 gcaaaggtaa tctggcgctg gctttgggtc ttggtgttat tttgttgtgc ttagcgttgg
      781 gcgtaaacgc ggctgcctat ttaattaatg aggcagcgtt gaagcgtcat ggataaagca
      841 aacaacaccg atatcctgcc gcttgaactc aaggacgtta actttgaggt tggcggtatg
      901 cgcctaatta aagatatgac cctcactctt aacgccggtt cgagcaccat tatactggga
      961 ccaaacggag ccgggaaaag cctgctcctt cggatatgcc atggccttat aacgccaaac
     1021 agcggcagca ttctctggcg gggaccgtca cgcaacgaag ccggcatata tcaggctatg
     1081 gtatttcaac ggccggtaat gttgcgacgt tcggtggcgg caaatcttca ttttgggctg
     1141 aagtcacggg gcacccccaa ggcagagcga gatcgtatca ttgatgacat gctgcaaatc
     1201 accggactca ctcgcttggc caggtcacct gcgcgtgcac tttcgaccgg tgaacaacaa
     1261 cgcctcgcca tcgcccgagc ttggtcacta aaacctgagg tgctgttcct ggatgaaccg
     1321 accgccaatc ttgacccggc tgccacccac gccattgaag aaacgattgc gagcattaag
     1381 caatccggca ccaaaattat catgtctact catgacctgg gacaggccaa gcgtttagcc
     1441 gataatgtac tgttccttta ccgtggccgc ttgctggaaa acgccgtagc agcagatttt
     1501 ttcaacagac ccaaaaatga tctggcccag gctttcttga aaggcgaatt gctttggtgg
     1561 aaccgtaagg aactaaaaac cccggcagaa ctgaaacatc gagatgtgtt gaaaaaatga
     1621 aaattgctgt cagattaatt gctgtttgga gtgtgttagc cggcctcatc catacctctt
     1681 ccttgattgc cgcagaacag tccattgagc gttttatcgt catggcgtcg accacctcaa
     1741 ccgtaaattc tggcttgttt gattatttac tgcccaaatt cagcaataaa ttcaaaatgc
     1801 aaatccgggt cgtcggcgtt ggcaccggcc aggctttgag gatcgcccgc cggggtgacg
     1861 cggatgtact gtttgttcac cacaaagaat ctgaacttgc ctttgtgcgg gatggttttg
     1921 gagttaaacg cctcaatgtc atgtataatg actttattat tgttggacct caggttgatc
     1981 cggcaaaaat caagaaaacc aagactgccg cggcagcata tcaagcaatc gcccaaagcc
     2041 gggcggtctt tgtctcccga ggcgacgaca gcggcaccca caaaaaaagt cttgcaatct
     2101 ggcaagcggc aatcagtacc aagccaaaat cagctatttg gtaccgggaa tctggcgccg
     2161 gcatgggggc aacgcttaat attgcctctt caatggaagc ttatacactt accgaccggg
     2221 caacttggga aaacttcaat aataaaacca cgctcaaaat tttatttgaa aacgatcctt
     2281 tgctgcaaaa tcaatacggc atcatcaaag tgaacccagc cctccataaa cacgtcaaaa
     2341 gccaggaggc tgagattttt atcaaatggg ttctttcagc cgaagggcag g
//
LOCUS       DASCNL010000848         2375 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001754367, whole genome shotgun sequence.
ACCESSION   DASCNL010000848 DASCNL010000000
VERSION     DASCNL010000848.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2375)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001754367"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            4..171
                     /locus_tag="QF359_11125"
     CDS             4..171
                     /locus_tag="QF359_11125"
                     /inference="COORDINATES: protein motif:HMM:NF016928.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0032981 - mitochondrial respiratory chain
                     complex I assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase subunit NDUFA12
                     family protein"
                     /protein_id="HJO87504.1"
                     /translation="MTEEAAKSRSWQQAHVPNLTGTAHAYRPAGHEFKSGQRAAATGD
                     YEAWSPKQTPD"
     gene            289..702
                     /locus_tag="QF359_11130"
     CDS             289..702
                     /locus_tag="QF359_11130"
                     /inference="COORDINATES: protein motif:HMM:NF014523.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HJO87505.1"
                     /translation="METPTGVTVKAVFNQINGLSKGDDVHMGSGAIGEVTKLTLGDSY
                     SAVVPLRNDHKIQLPNDTTAAIHTDGFFSRKYIALEPGGNEEYLATGDEITMIQDSVV
                     VQDLLELIIGEAKSFFPSPATKMKAAKLKKIVAGI"
     gene            752..1144
                     /locus_tag="QF359_11135"
     CDS             752..1144
                     /locus_tag="QF359_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2155 domain-containing protein"
                     /protein_id="HJO87506.1"
                     /translation="MIHFLKSVTLLVTLLAFGAANAQAEQFNIAILQGLDKVTARVST
                     FPAPIGQTVKFGTLEIIARTCDKRPPEETPESAAFLDVWEVRPGEPAASVYRGWMFAS
                     SPALAAMEHPVYDVWVLDCKSAVYTTPK"
     gene            complement(1158..1832)
                     /gene="aat"
                     /locus_tag="QF359_11140"
     CDS             complement(1158..1832)
                     /gene="aat"
                     /locus_tag="QF359_11140"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014748336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HJO87507.1"
                     /translation="MTGSNSYTPDQIKLTPEIILRAYAAGIFPMAESRDDHELFWVDP
                     EMRGIFPLDGLYISRSLKKRIRQQRFDITYDTDFTGVIQGCAESTIDRYDTWINIQII
                     HLYSRLFQMGHAHTVECWLDDELVGGLYGITLKGVFFGESMFSRQTDASKIALVHLVA
                     RLHEDGFVLLDTQFVTDHLKSLGAIEIPRDNYHELLDNALTVDADFNTKGSEEVHWAE
                     IEKLLA"
     gene            complement(1922..2359)
                     /gene="aroQ"
                     /locus_tag="QF359_11145"
     CDS             complement(1922..2359)
                     /gene="aroQ"
                     /locus_tag="QF359_11145"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HJO87508.1"
                     /translation="MTNSILILNGPNLNMLETREPEVYGKLSLADIEGLCQARAVELG
                     LNIDFRQSNSEGELVDWIQIASADHAAVIINAGAYTHTSIALLDALRAAGLPVVEVHL
                     SNIFQREEYRHNSYISEAANGVICGFGSKGYELALVAAKTLIA"
BASE COUNT          632 a          553 c          581 g          609 t
ORIGIN      
        1 ccattgaccg aagaagcagc gaagtcgcgc tcatggcaac aggcgcatgt gccgaatttg
       61 actggcacgg cgcatgcgta tcggcccgcc ggccatgaat tcaaaagcgg tcaacgggcg
      121 gcagcaacgg gtgattatga ggcttggtca ccaaagcaaa ctccggatta gaaatacaaa
      181 gaataaattg gtgttttaaa tgaaggaaga agtctgacat atcaccgttg gcctgatcac
      241 tctgatcgtg ttggtgttgg ttggcagtgt tccttttcaa gcagtcagat cgaaacgcca
      301 accggcgtca ccgtcaaagc ggttttcaat cagataaatg gattatcaaa aggcgatgac
      361 gttcacatgg gtagcggcgc cattggtgaa gttacgaaac ttactttagg cgacagctat
      421 tccgccgtcg tgccgttacg gaatgatcac aaaattcaac tgcctaatga tacgactgcc
      481 gccattcata ccgatggatt cttcagccgt aagtatattg ctctggaacc cggcggtaac
      541 gaagaatatc tcgccactgg tgatgaaatt accatgatcc aggattcggt ggtggtgcag
      601 gatttgctcg aattgattat tggtgaggcg aaatcatttt tcccgtcacc agccacaaag
      661 atgaaagcgg caaagctaaa aaaaattgtc gcaggaatct gaaatagccg gttttgttgc
      721 tgtgccgagg tcatcctgct aagtactctg catgattcat tttctaaaat ctgtcacttt
      781 gctggttact ttgttggcat ttggtgcagc caatgcccaa gctgagcaat ttaatatagc
      841 gatcttgcag gggctcgata aggtgacggc tcgcgtctcg acttttcccg ctccgattgg
      901 ccagacggtg aaattcggaa cgcttgagat tatcgcccgc acttgtgata agcgtccgcc
      961 ggaggaaaca cctgaaagtg cagccttctt agatgtttgg gaagtgcgtc cgggagagcc
     1021 agcggcgagc gtctatcgcg gctggatgtt tgcatcgagc cccgcgctgg ctgcgatgga
     1081 gcatccggtt tacgacgtct gggtgcttga ttgcaaaagt gccgtatata cgacgcccaa
     1141 ataagacgcc taagtaatca ggccagcagt ttttcgattt ctgcccaatg gacctcttca
     1201 gaacccttgg tattaaaatc tgcatcaacg gtcaaagcgt tgtccagcaa ttcgtgataa
     1261 ttatcgcgcg ggatttctat cgcccctaaa cttttaagat gatcagtaac aaattgggta
     1321 tccaagagga caaagccgtc ttcatgcaac cgggcgacga gatggaccag ggcaattttg
     1381 ctggcatcgg tctggcggga gaacatgctt tcaccaaaga acacgccttt aagtgtaatg
     1441 ccatagaggc cgccgaccag ttcatcatcc agccagcatt caactgtatg tgcatgtccc
     1501 atttggaaaa gccggctata gagatgaatg atctgaatgt tgatccaggt gtcgtaacgg
     1561 tcaatagttg attcagcgca gccctgaata actccggtga aatcggtgtc gtatgtaatg
     1621 tcaaagcgtt gttggcggat acgctttttc aaactgcgtg atatatagag cccatcaagc
     1681 ggaaatatcc cacgcatttc aggatcaacc caaaatagct cgtggtcgtc acggctttcc
     1741 gccatcggaa aaatacctgc agcatacgca cgcaaaataa tttcaggcgt tagtttaatc
     1801 tgatccgggg tgtagctgtt agaaccagtc attaaaattt gctcgttatt tgtagtttgc
     1861 tatcaaagac ataggtattt ttgcttcaaa aactaataaa tgttgggatt tatcaataaa
     1921 tctaagcgat tagtgttttc gctgctacca gggccagttc ataacctttg ctgccaaatc
     1981 cgcaaataac accattggcc gcttccgaga tataagaatt atgacggtat tcttcacgct
     2041 ggaagatatt ggaaagatga acttcgacaa ccggtagccc agcggcacgc aaggcatcca
     2101 aaagcgcgat tgaggtgtgg gtataagcac cagcattaat gataaccgca gcatgatcgg
     2161 cgctggcgat ttggatccaa tcgaccagct cgccttcgct attgctctga cgaaaatcaa
     2221 tattgagccc aagctcaacc gctcgcgctt gacacagccc ttcaatatcg gcgagtgaca
     2281 acttaccgta aacttccggc tcacgggtct ccagcatgtt taaatttggg ccgttcaata
     2341 tcaatattga gttcgtcatt gcttacattc cttat
//
LOCUS       DASCNL010000849         1086 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001755247, whole genome shotgun sequence.
ACCESSION   DASCNL010000849 DASCNL010000000
VERSION     DASCNL010000849.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1086)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1086)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001755247"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /locus_tag="QF359_11150"
     CDS             <1..873
                     /locus_tag="QF359_11150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HJO87509.1"
                     /translation="RLALTSKGKAVDVLVMTATPIPRTLTLTAYGDMEVSRLIEKPAG
                     RLPIDTRTVAIDRIDEVVLGVSRALNEGTKIYWVCPLVEESEKIDLAAAVDRFAHLRA
                     MFGERVGLVHGKMKGKEKDAVMAAFADGSVDILVATTVIEVGVDVPDATIMIIEHAER
                     FGLAQLHQLRGRIGRGSGKSTCILMFVENLTQTARKRLEILRETEDGFVIAEEDLRLR
                     GTGELLGTRQSGLPEFRLADLAMHADLIATARDDAKLVLEMDPKLESERGQQLRVLLY
                     LFERDTAVQFLRSG"
BASE COUNT          246 a          263 c          314 g          263 t
ORIGIN      
        1 cgcctagcac tgacttccaa aggaaaagct gtcgacgtgc tggtgatgac ggcaacaccg
       61 attccccgca ccctgaccct caccgcttat ggcgatatgg aagtctcgcg cttaatcgaa
      121 aagcctgccg gacgcctgcc gattgacacc cgcactgtgg ctattgaccg catagatgaa
      181 gttgtcctag gcgtcagccg cgcgcttaac gaaggcacca agatttactg ggtttgcccg
      241 ctggtcgaag agtcggagaa aattgatctt gccgccgctg tggaccgctt cgctcattta
      301 cgggcgatgt tcggtgagcg ggttggcctg gtgcatggca aaatgaaggg taaggagaag
      361 gatgctgtaa tggcggcgtt tgccgacggc agtgttgata tcctggttgc aaccacggtt
      421 atcgaggttg gtgttgacgt gcctgatgct accatcatga tcatcgaaca tgccgagcgc
      481 tttggcttgg cacaattgca tcaattgcgg ggccgcattg gccggggcag tggaaaatca
      541 acctgcatcc tgatgtttgt cgagaatctt acccaaaccg cacgcaaacg gttggaaatt
      601 ttgcgcgaaa ccgaggatgg ctttgttatc gccgaagagg atttacggct taggggcacc
      661 ggcgaactgc tcggcacacg gcaaagcggc ctgccggagt tcaggctggc tgatttggcc
      721 atgcacgctg atctgatcgc gacggcccgg gatgacgcca agctggtcct agagatggat
      781 cccaaacttg aaagtgagcg cggccaacaa ttgcgcgtgt tgctttattt gtttgaacgc
      841 gacacggccg tgcaattcct gcgctcgggg taagaattta ataaccccga agggcgccaa
      901 taacacgaaa aagacaagaa aattagttaa tttcggtata gatagaggat gtccgcttat
      961 atgaggcatt ttttgtcaag ttggttttaa tagtatcgca tgatggtcac ctcccttgtt
     1021 tgagcctttg cgttttgtgc gggtcttgcg atgagtttca tgtttcgagc gactgatcgc
     1081 atcaac
//
LOCUS       DASCNL010000850         2298 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001755395, whole genome shotgun sequence.
ACCESSION   DASCNL010000850 DASCNL010000000
VERSION     DASCNL010000850.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001755395"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            458..534
                     /locus_tag="QF359_11155"
     tRNA            458..534
                     /locus_tag="QF359_11155"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:492..494,aa:Gln,seq:ctg)
     gene            632..1858
                     /locus_tag="QF359_11160"
     CDS             632..1858
                     /locus_tag="QF359_11160"
                     /inference="COORDINATES: protein motif:HMM:NF024877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase"
                     /protein_id="HJO87510.1"
                     /translation="MNDTKPSSWPANIRPEKTQDWDAFKDSDTEAGIQVNDNFERFEQ
                     RNDMFSRSQWDEKIMTKAALEFWRGHRKPKPRKGDGFRQRDFALRNASWVMASSIMER
                     GFSDGLREGFTDDIRAFHPPDPTKVDVSDPAEMSREIKQISKYFGADLVGITEYDERW
                     VYTSKFNIKTKEESPVELPEGLTSVIMVGHAMEYEIIKSMPSALASAAVGKGYSTEAA
                     IVMHIAQYIRNLGYEAVGSMNDTSLTIPQAIKAGLGEYGRHNMLITKEFGPRVRISKI
                     FTDMPLDHDKPDKFGVTEFCSICRRCYDACPVNAITDGPPTETGHNKSSLEGVLKWTT
                     DCEKCFGYWTALKTDCAICMRICPYNKDFSKWYMRAARWLAGTKLRWVMLWLDVKLGY
                     GERDAPQKWWSGAYHK"
     gene            2083..>2298
                     /locus_tag="QF359_11165"
     CDS             2083..>2298
                     /locus_tag="QF359_11165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87511.1"
                     /translation="MFFKCAHHAPADDQSSGRVVSNGSTSRIVDIHCHRECAAAAEMM
                     KTEAECVGFAALSFGSELTKEVNRQQLI"
BASE COUNT          654 a          515 c          535 g          594 t
ORIGIN      
        1 ggctaatacg ccgctgaaaa acacggctgc taatccggca acgggatatt gctgaatgta
       61 taatttgata agattccaaa ttgccaaact taatttaagc cccaccatag ccattccttc
      121 catccaagct tagcaacggt atattttcgg gcataacata cgaattcaaa aaaaaatttt
      181 agaattacaa ataaattcta acctcgatct agatcatgaa gtgaaaaaaa atatttaaat
      241 taaaggtatt taaccctaat tatcatataa atttatgttc ttcagcctct ttatttacaa
      301 attaccaatt ttggtaaaaa aacaaattct atggcggtcc gaaaatcaga tttctatcta
      361 ttttgtgtgg cacagacagc gataaagcta aggctgcttt tggtcttgcc aaaattaggg
      421 gaaaagccta agaaaaccgc ccatgaaatt tgcgcattgg ggtgtagcca agtggcctaa
      481 ggcaccggat tctgattccg gcattcggag gttcgaatcc tcccacccca gccatctttc
      541 aagccaaatc cctcacccaa cctcactgat ttatttcctc gaaatccggt gatatggtcg
      601 taccagatta gttgaattgg aatatcactt tatgaatgac accaaaccat caagctggcc
      661 ggctaatatc aggccggaaa aaactcagga ctgggatgcc tttaaagaca gcgatactga
      721 agctggaatc caggtgaatg acaactttga gcgctttgaa cagcgcaatg atatgttttc
      781 gcgttcgcaa tgggacgaaa aaattatgac caaggcagcg ttagagttct ggcgcggcca
      841 tcgcaaaccc aaaccacgca aaggtgatgg tttccggcaa cgtgatttcg ccctgcgtaa
      901 tgcctcatgg gtgatggcgt cttccatcat ggaacgcgga ttttcggatg gcctgcgtga
      961 aggtttcacc gatgatatcc gggcctttca cccgcctgat cccaccaaag ttgacgtcag
     1021 tgaccccgct gaaatgagcc gggagattaa gcaaatatca aaatattttg gtgccgattt
     1081 ggttggcatt accgaatatg atgagcgctg ggtctatacg tcgaaattta atattaaaac
     1141 caaagaagaa tctccggtcg aacttccgga aggtctcacc agtgtcatta tggtaggcca
     1201 tgcgatggaa tatgaaatca ttaaatccat gccctcagca ctcgccagtg cggcggtcgg
     1261 caaaggctat tccaccgaag ctgcaatcgt tatgcatatc gcccaatata tccgtaattt
     1321 gggttatgag gcggtgggtt cgatgaacga tacttcgctg acgattccac aggccatcaa
     1381 ggccgggctc ggtgaatatg gccgccacaa tatgctaatc accaaggaat ttggcccgag
     1441 ggtccgtatt tcaaaaattt tcaccgacat gccgctggat catgacaaac cggataaatt
     1501 tggtgtgaca gaattttgca gtatctgccg gcggtgctat gacgcctgcc cggttaatgc
     1561 cattaccgac ggtccgccaa ccgaaactgg tcataataaa tcgagcttgg agggtgtgct
     1621 aaaatggacc accgattgtg aaaaatgctt cggttactgg accgcgctca aaaccgattg
     1681 cgccatttgc atgcggatct gcccttacaa taaggatttc tccaaatggt atatgcgggc
     1741 tgcccgttgg ctggccggaa cgaagctgcg ctgggtgatg ttgtggctgg acgtgaaatt
     1801 gggttatggc gagcgcgatg ctccgcaaaa atggtggtcc ggcgcctatc ataaatagat
     1861 gaggaaaaaa atgatcctcg gcaattaagc cggaggccaa tttcaacaat tgttttacaa
     1921 attttttcat taggtggggt cgctttgtta aactatgaaa cttaacgttg agatatcctt
     1981 caacgagtgc attggcgggt attattttgt atgccataac cgcgccagaa tacttgaata
     2041 gatagttcat aattagccaa aaattcggga agattaaacc agatgttttt taaatgtgcc
     2101 catcatgcac cggcggatga tcagtcctcc ggacgggttg tttcgaacgg ctcaacatcc
     2161 agaatcgtcg atattcattg tcaccgggaa tgtgcagcgg cggcggaaat gatgaaaact
     2221 gaagccgagt gcgtcggttt cgctgctctt tcgtttggca gcgaattgac caaagaagtc
     2281 aaccgccagc aattgatc
//
LOCUS       DASCNL010000851         2780 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001760955, whole genome shotgun sequence.
ACCESSION   DASCNL010000851 DASCNL010000000
VERSION     DASCNL010000851.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2780)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2780)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2780
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001760955"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="QF359_11170"
     CDS             <1..227
                     /locus_tag="QF359_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HJO87512.1"
                     /translation="THNRQKNFTRRAILFRANEIYQGMFGDADGRVPVTFEVITLTAW
                     SPSPNQQQPATRGSGEVNLADVLEGDVNNN"
     gene            250..960
                     /gene="sfsA"
                     /locus_tag="QF359_11175"
     CDS             250..960
                     /gene="sfsA"
                     /locus_tag="QF359_11175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HJO87513.1"
                     /translation="MIFSDPLIRGTLIKRYKRFLTDVELENGDVVVAHCANPGSMLSL
                     LEIGAEVWLSPARNPKRKLKYTWEMIRIGDALVGLNTSLPNTIVVEAIENDLIPELAG
                     YETLRREVKYGKNSRIDILLESTSIPICYVEIKSVTMSRWEKTKNLAEFPDSVTARGA
                     KHLQELSDQVADGKRAVMLYLVQREDCVRFAVAADIDPTYAAELIKAKKAGVEVICYG
                     CSVSPEAIKINRKIDTVN"
     gene            998..1792
                     /gene="map"
                     /locus_tag="QF359_11180"
     CDS             998..1792
                     /gene="map"
                     /locus_tag="QF359_11180"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HJO87514.1"
                     /translation="MDAEARSIKIHTTADFAAMRKVGRLAAETLDMIADHVEPGVTTE
                     ELDRLCAEFITDHGAISAPLNYRGFPKSVCTSVNHVVCHGIPGDKILAEGDIVNIDIT
                     PIVDGWYGDSSRMFLAGEISIKAKRLVDITYESLMKGIETVKPGATVGDIGHAIQSFV
                     EPQRYSVVRDFCGHGLGQIFHDAPNILHFGDPGEGAVLREGMFFTIEPMVNIGRPEVK
                     ILADGWTAVTKDRSLSAQFEHTVGVTLDGCEIFTLSPAGRDRPPYV"
     gene            1895..2770
                     /locus_tag="QF359_11185"
     CDS             1895..2770
                     /locus_tag="QF359_11185"
                     /inference="COORDINATES: protein motif:HMM:NF024844.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HJO87515.1"
                     /translation="MKDNDMDGDENEFSDYVGRSMIMEDIVTVSSVHKLTVTLNRSDP
                     IPKIGDPVPPGWHHVLFPRFPLNKDLGGDGMVSEIDDGPVDPLPLRMFAGSRTRFHQP
                     IRIGDAVTQERKLVSMVPKEGKSGKLVFGTYAHTITGPNGLCTEDDWDLVFMEEDKDG
                     TRKPPPPKPGPGSADWDRLINVNETMLFRYSACTFNPHRIHYDHPYTTEVEGYPGLVV
                     HGPLTATWLLELARDNMPDKTMTGFQMRAIAPIYANQDIRLVGNITKEGSACDLWVLT
                     PEGNVAMEAAATFRE"
BASE COUNT          732 a          649 c          694 g          705 t
ORIGIN      
        1 cgacccacaa tcgccaaaaa aactttaccc gccgggcaat tttgtttcgg gctaacgaga
       61 tttatcaggg tatgtttggc gatgccgatg gtcgggtacc ggtaactttt gaagtgatta
      121 cactaactgc ctggtcacca tcgcctaatc aacaacaacc agcgacgcgc ggctccggcg
      181 aagttaatct tgctgatgtg ctggaaggtg atgtaaataa taattagctc gataggttaa
      241 tttttacgta tgatattctc cgaccccctt attcgcggca ctttgatcaa acgctataaa
      301 cgcttcctca ccgatgttga acttgaaaac ggcgacgtcg ttgtcgctca ttgcgccaat
      361 cccggctcaa tgttgagctt gcttgaaata ggcgctgagg tttggctgtc accggcgcga
      421 aaccctaaac gcaaattaaa atacacctgg gagatgatcc gcattggtga tgccttggtg
      481 ggactaaata ccagtttacc caataccatt gtcgtggagg caattgaaaa tgatctaatt
      541 cccgaactgg cgggctatga aacacttagg cgggaagtga aatatggcaa aaattctcgc
      601 atcgacatat tgcttgagag caccagcatc cctatttgtt atgtagagat taaaagtgtg
      661 accatgtcac ggtgggagaa aactaaaaat ttagcggaat ttcctgattc tgtgacggcc
      721 cgaggagcca aacatttaca agaattatcc gaccaagtgg ctgacggtaa gcgtgcggta
      781 atgttgtatc tggtccaaag agaggattgt gtccgctttg cagtggctgc cgacattgat
      841 ccaacctacg cagcagagtt gataaaggcg aagaaagctg gtgttgaggt tatatgttat
      901 ggttgcagcg tctcgccgga ggcaataaag ataaaccgta aaatagatac cgtgaattga
      961 atcagcggca aatttactat tataggggtt ctaaaccgtg gatgcggaag caagatcaat
     1021 aaaaattcat accactgctg atttcgcagc aatgcgcaaa gttggccgtt tggcggctga
     1081 aactctcgat atgatcgcgg atcatgtcga gcctggcgta acgaccgaag agcttgaccg
     1141 gctttgtgct gaatttatta ctgatcatgg cgcgatttca gcgccgctta attatcgggg
     1201 atttcctaaa tccgtttgca cttcggttaa tcacgttgtc tgtcatggta ttcccggcga
     1261 taaaatactg gcagagggcg atattgtaaa tattgacatc accccgattg ttgatggctg
     1321 gtacggtgat tccagccgaa tgtttttagc cggtgaaatc agtattaagg ccaagcgtct
     1381 agttgatatc acttacgaat ccttgatgaa aggaatcgaa accgtcaaac caggcgccac
     1441 ggtcggcgac attggccatg ccattcaaag ctttgtggaa ccccagcgct attcggtagt
     1501 ccgtgatttt tgcggccatg gtctcggcca gatatttcat gatgcgccga atattctaca
     1561 ttttggagat ccgggcgaag gtgccgtgct ccgcgaggga atgtttttta ccattgaacc
     1621 aatggttaat attggccgtc cggaagttaa aattctagcc gatggctgga cggcggtgac
     1681 taaagaccgc tcgctgtcgg cgcagttcga gcacactgtc ggtgtgacat tggatggttg
     1741 tgagattttc acgctatcgc cagctggccg cgaccgcccg ccctacgtct aaaatagcta
     1801 tatccaccag tttatttccc acgatagcag gtgcgaatta taaagtaata tcggatattt
     1861 ccaggatatg cgctacaatt aaatccgatc aatattgaaa gataatgata tggatggtga
     1921 cgaaaacgaa tttagtgact atgtcggccg cagcatgatt atggaagata tagtcacggt
     1981 ttccagtgtt cacaaattaa ctgtgacatt aaaccggtct gacccgatcc caaaaattgg
     2041 cgatcccgta ccgccaggct ggcatcatgt cctatttccc cggtttccgc tgaacaaaga
     2101 tttgggtggt gatggcatgg tctctgaaat tgatgatgga cctgttgacc ccttgccctt
     2161 gcgcatgttt gccggcagcc gcacccgctt tcaccagccg ataagaattg gcgatgctgt
     2221 gacccaggag cgaaaactcg tctcaatggt gccgaaagaa ggcaagtcgg gcaaactggt
     2281 atttggcact tacgcccaca cgatcactgg ccccaacggc ctctgcactg aagatgattg
     2341 ggatttagtt tttatggagg aagataaaga cggcacccgc aaaccaccac cgcccaaacc
     2401 cggacctgga agcgccgatt gggatcgcct catcaatgtc aatgaaacca tgctgttccg
     2461 ctattctgcc tgcacgttta atccacaccg cattcattat gaccaccctt acaccacgga
     2521 ggtcgaaggt tatcccggtc tggtcgtgca cggacccctt acggcaacct ggctgctgga
     2581 actagcgcgc gataatatgc cggataaaac tatgaccggc tttcagatgc gagccatagc
     2641 tccaatttac gccaatcagg atattcgatt agtcggtaac attaccaaag aaggatccgc
     2701 ttgcgattta tgggtactga caccggaagg caacgtggca atggaagctg cggcgacttt
     2761 tagagagtaa tcacatgact
//
LOCUS       DASCNL010000852         2478 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001761784, whole genome shotgun sequence.
ACCESSION   DASCNL010000852 DASCNL010000000
VERSION     DASCNL010000852.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001761784"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            765..>2478
                     /locus_tag="QF359_11190"
     CDS             765..>2478
                     /locus_tag="QF359_11190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO87516.1"
                     /translation="MDAQPEKTQSPELTKLFEPVKFGKYELTNRVKYGACCVSNFNNT
                     DGSITPRELARMKVIAESGCGMITNQGAYADPLGEGKAYYTQIALYDEKFLPQFETIA
                     EYIHDNNAMAIQQILHAGRYGGIDLGYCVQPSVVPQTLPHFRPPREMTKEQIKECIEQ
                     HAFASELSIRAGFDGVEITSFMGYLLANFLSSFTNQRSDEYGGSVENRARFLVELIDA
                     IKQRIGDDYPLIVRLNGAELMDQWGGNTVDECFEIMHIAADAGMDMLSLTIGWQEAPE
                     SSIGRDVPPGHWNYLAARAKKELPDLPLAYGGRLPDPVMAEECLNDGIFDYWEVCRPL
                     LADPQLIHKAKEHRLHEAKVCVGSLNCLSRLFRDLPYTCTINPALGHEYEPEYNISPA
                     VTIKRVMVVGAGPSGMEAAITAAQRGHKVTIFEKSDVIGGALRGYAANDLAHPEDLKR
                     MVFYYEVMAEKHGIEVKFGIEPTPKMMRGMLHEYDAVILATGAMVDMDALPISEGAPV
                     VDAFDVAKGKVEIEKGQSVAVIGGGKIGLTLAESLKDQGYEVVIIDENRRLGHDVAPT
                     WKWRH"
BASE COUNT          634 a          610 c          610 g          624 t
ORIGIN      
        1 taatcggtaa aaatccacgc gactggctca aacgttagat tatcactgac caataaactc
       61 catctttctt gtccagcccc aattttcagt accactttgt agtagagttt taggcactgg
      121 cggcctgatg tttaatgact gaaggggtcg gatatgattg tattgtttca accaggtatt
      181 aatgacgatc tgagcctgtt taatagtcga gaaccactcg gcgtttaaaa cttctcttct
      241 gagggagcca ttgaagcgtt cagtgtatcc attctcccaa agactactgg gatagatttg
      301 gattagtttg atgccgacct tcttgaacca agcttgtaga tcacgggcaa taaactcaga
      361 accattgtca gattggatgt aatgccataa tattacttat tgagcagctt attccatttg
      421 gctctggttt ctggattaac atccgccatt ttcatttccc catcctttga aattaattgc
      481 cgtcttgttc tatctaggga accactgcgg gtacaagaaa aatagaatat aaaaaataat
      541 cagtgctact gttggaattg caaggccaat aactagaaat cgagatcgca tgaactaatt
      601 ctccccggaa attattggaa tagcttactt aaatccgacc acaaaaacca ctaccgacta
      661 agcttgatca acatctatga gaaggctaga tttgtttcat acattgttcg caaccaaaac
      721 aatctttggt atctgttgtc aatatcgcag cctaggaaaa caccatggac gcccaaccgg
      781 aaaaaactca atcgcctgaa ctcaccaagc ttttcgagcc ggtaaaattc ggcaaatacg
      841 aattaactaa tcgggtgaaa tacggcgcct gttgtgtctc caatttcaac aataccgatg
      901 gctcgatcac gccgcgagaa ttggcgcgta tgaaggtcat tgctgaatcc ggctgcggca
      961 tgatcaccaa ccagggtgcc tatgccgatc cgctgggcga gggcaaagct tattacaccc
     1021 aaatcgcgct ttacgatgaa aaattcctac cccagtttga gaccattgcc gaatatatcc
     1081 acgacaataa tgccatggcg atccaacaga ttttgcacgc tggccggtat ggcggcattg
     1141 atctcggcta ttgtgttcag ccttcggtcg taccccaaac tttacctcat ttccgcccgc
     1201 cccgggaaat gaccaaggaa caaattaagg agtgcatcga gcagcacgcc tttgcctctg
     1261 agctatcgat ccgtgccgga tttgacggcg tcgagatcac cagctttatg ggttatttgc
     1321 tggctaattt tctctccagc ttcactaacc agcggtccga cgaatatggc gggtcggtcg
     1381 agaaccgggc gcgtttcctg gtcgagctga tcgacgccat caagcaaaga atcggtgatg
     1441 attatccttt gattgtccgc cttaacggcg ccgagttgat ggatcaatgg ggtggcaaca
     1501 cggtcgatga atgtttcgag atcatgcaca tcgctgccga cgccggcatg gatatgctga
     1561 gcttgactat cggctggcag gaagcaccag aatcttcgat tggccgcgat gtcccgccgg
     1621 gccattggaa ttatctagcc gcgcgcgcca aaaaagaatt gccggattta ccgctggctt
     1681 acggtggccg tctgcccgat ccggtaatgg cggaagaatg cctcaatgat ggtatttttg
     1741 attattggga ggtttgccgg ccactactgg ccgatccgca actaattcac aaagccaaag
     1801 agcaccgctt gcacgaagcc aaggtctgcg tcggctcgct caattgcctg tcgcggctgt
     1861 tccgcgatct gccttatacc tgcacgatca acccagcttt gggtcacgaa tacgagcctg
     1921 aatacaacat ttcaccggcg gtgacgatca aacgggtaat ggttgtcggt gccggcccct
     1981 ccggtatgga ggccgccatc acggctgctc agcgcggtca taaagtaact atctttgaaa
     2041 aatccgatgt catcggcggc gccctgcgcg gttatgctgc caacgatttg gcgcatccgg
     2101 aagatttgaa gcggatggta ttttactacg aggtaatggc cgaaaagcat ggtatcgaag
     2161 tcaaatttgg tattgaacca acgcctaaaa tgatgcgtgg gatgttgcac gagtatgatg
     2221 cagttattct ggcaaccggc gccatggtcg atatggacgc cctgccaatt tccgaaggtg
     2281 cacctgtggt cgatgctttc gatgtcgcca aaggtaaagt cgagatagag aaaggtcaga
     2341 gcgtcgccgt catcggcggt ggcaagattg gcttgacgct cgctgaatcg cttaaagacc
     2401 agggctatga ggtcgtcatt atcgatgaaa accggcgtct cggccatgat gtcgcgccga
     2461 cgtggaaatg gcggcaca
//
LOCUS       DASCNL010000853         3496 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001762495, whole genome shotgun sequence.
ACCESSION   DASCNL010000853 DASCNL010000000
VERSION     DASCNL010000853.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3496)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3496)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3496
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001762495"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /locus_tag="QF359_11195"
     CDS             complement(<1..441)
                     /locus_tag="QF359_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HJO87517.1"
                     /translation="MEDDIRELYQEVILDHGKNPRNFRHPEDATYEADGNNPLCGDRL
                     TVFVKVGGDESIEDAAFEGRGCAISVASASMMTDIVRGKKVTQVDALFDTFHKMCMGE
                     EIGETPEEFKDDLDKLMVLSGVKQFPMRVKCATLAWHTMNAAVHG"
     gene            complement(441..1697)
                     /locus_tag="QF359_11200"
     CDS             complement(441..1697)
                     /locus_tag="QF359_11200"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HJO87518.1"
                     /translation="MTATTVMKSDTSNSYDVVAIRADFPALNLEINGYPHAFLDSGAS
                     AQKPNQVLEQMDQAYRFEYANVHRGAYTLSQLATDNYENARTAVAKFMNAKTPDEIIF
                     TRNVTAAINLVAHSYGREFLKAGDEIIISHMEHHANIVPWQLLRDAIGIELKVVPVDD
                     AGNFLMAEFEQLLSSKTKLVAVTHVSNVLGTIVPIKDVVLLAHIHGAQVLIDGAQGIV
                     HEGIDVQDLDADFYAFTGHKLYGPTGIGVLWGKLDLLNKMPPYQGGGDMIENVTFEKT
                     TYREAPARFEAGTPPIVEAVGLAAAIDYVSDIGLTNIAAHEQSLLAYATPALSAIDGL
                     TIIGQADNKAGIISFTLNDIHSHDIGTIIDARGVAVRAGHHCAQPLMDRYGVAATARA
                     SFGLYSNTQDIDQLVDALNYVKEIFS"
     gene            complement(1699..2991)
                     /gene="sufD"
                     /locus_tag="QF359_11205"
     CDS             complement(1699..2991)
                     /gene="sufD"
                     /locus_tag="QF359_11205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HJO87519.1"
                     /translation="MNELSPLSQSFIAQHGDAKFGATVPWLDGLRKEGIERFASSGLP
                     TPDVEEWKYTNLKVLEKLDVARTTEAAAIDPTELTWLPADLATHKLVFVNGHYSQELS
                     AIGDLPDGVRVLSLAEAMTSDEDLMAEHLGQIGGFKDAPVLALNTAFIEDGFVIIVEN
                     TELENPIEVVFVSQTGASNSNHPRNLILAKDNARMTILERHLGEGSYLANHGFEVSVA
                     GSSHVKHYRLLEDSATGINLSTVKARVGKDSIYDSFVLSIGGQLSRSEIHVACEEPGA
                     HTNLNGVYIARDSQHIDNTTLIDHLVPNTTSKETYKGALDDKARGVFQGAIVVAEGAD
                     GTDGQMSNKTLLLSDESEIDSKPQLEIYADDVKCAHGFTTGELEETSLFYLRSRGIPE
                     APARAMLVEGFLAEVVEEGIKEDYQEIFTAKISAWMEN"
     gene            complement(2991..>3496)
                     /gene="sufC"
                     /locus_tag="QF359_11210"
     CDS             complement(2991..>3496)
                     /gene="sufC"
                     /locus_tag="QF359_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018979648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HJO87520.1"
                     /translation="AFQYPVEIPGVSTINFLKAAVNSVRKYRGESEFDAMDFLKFVRE
                     QTKILNIGDDMLKRAVNVGFSGGEKKRAEILQMAVLNPSFAILDETDSGLDVDALRIV
                     GEGVTALRSPERSMLVITHYQRLLDYIVPDVVHVLVDGKIVDSGDKNLALELEKNGYA
                     NYTEVAA"
BASE COUNT          883 a          919 c          811 g          883 t
ORIGIN      
        1 accgtgaacg gctgcgttca ttgtgtgcca agcgagcgtc gcgcatttga cccgcatcgg
       61 gaattgtttg acgccagaga gcaccattaa tttatccaaa tcatctttaa attcttcagg
      121 cgtttcgccg atttcctcac ccatacacat tttatggaaa gtatcgaaca gcgcatcgac
      181 ttgggtgact tttttaccgc gcacgatatc ggtcatcatc gatgccgagg cgacggagat
      241 cgcacaacca cgcccttcaa aggcggcatc ttcgatactt tcatcgccac caactttaac
      301 aaagaccgtc agccggtcac cacacagcgg attattacca tcggcttcat aggtcgcatc
      361 ttccggatgg cggaaatttc gagggttttt gccgtgatcc aaaataactt cctgataaag
      421 ctcgcgaata tcgtcttcca ttagctgaat atttccttca cataattaag tgcatcgacc
      481 aactgatcga tgtcttgagt attgctgtac aaaccgaacg aagcgcgcgc cgtcgcggcg
      541 acgccatagc gatccatcaa aggctgagcg caatgatgcc cggcccgaac cgcaacgcca
      601 cgagcatcaa tgatggtgcc gatgtcgtgg gaatgaatat cgttcagcgt aaatgatata
      661 atgccggcct tgttgtcggc ctgaccaata atcgtcaaac cgtcgatcgc agaaagggct
      721 ggtgtcgcat aagccaacaa agattgttcg tgggcagcga tgttcgttaa gccaatatcc
      781 gagacataat caattgccgc cgccaagcca accgcttcga caattggcgg cgtaccggct
      841 tcaaagcggg cgggtgcctc acggtaggtg gttttttcaa aagtgacatt ttcgatcatg
      901 tcgccgccac cttggtaagg cggcatttta ttaaggaggt cgagcttgcc ccatagcaca
      961 ccaatgccgg tgggcccata aagcttgtgg ccggtaaagg cataaaaatc cgcgtccaaa
     1021 tcctggacgt caataccttc atggacgata ccttgcgccc catcgatcaa gacctgcgcg
     1081 ccgtgaatat gggccagaag aaccacgtct ttgattggca cgatggtacc gagcacgttc
     1141 gagacgtggg tcaccgcaac aagcttggtt ttggaactta aaagctgttc aaactcagcc
     1201 atcaggaagt tcccggcatc atcaaccggc accactttaa gctcaatccc aatggcgtcc
     1261 cggagcaact gccacggcac aatattggcg tggtgctcca tatggctgat gataatttcg
     1321 tcacctgcct ttaaaaattc acggccataa gaatgggcaa ccaaattgat cgccgctgta
     1381 acattacggg tgaagataat ctcatccggt gtcttggcat tcatgaactt ggcgacagca
     1441 gttcgggcat tttcataatt gtcggtcgcc aattggctta gcgtataggc gccccggtgt
     1501 acattagcgt attcgaaccg gtaagcctga tccatctgct ccaaaacctg attaggtttt
     1561 tgggcgctgg cgccactatc aaggaaggca tggggatagc cgttaatctc caggtttaac
     1621 gccggaaaat cagcgcgaat cgccacaaca tcgtagctgt tgctcgtatc tgatttcatc
     1681 actgttgttg ccgtcatatt aattttccat ccaagcggaa atctttgccg taaagatttc
     1741 ctgatagtct tctttgatac cctcttcaac cacttcggct aaaaaacctt cgaccagcat
     1801 ggcacgggcg ggcgcctccg ggataccgcg ggagcgtaaa taaaacagcg aggtttcttc
     1861 taattcaccg gtggtaaatc catgagcgca tttaacatca tcggcataaa tttcaagttg
     1921 tggtttactg tcaatctcgc tttcatccga taacaacagc gttttattgc tcatctgacc
     1981 atcggtgccg tcagcgcctt cggcaaccac gatcgcgcct tgaaagacac ccctagcctt
     2041 atcatccaag gcacctttat aggtttcctt agaggtcgtg ttgggcacca ggtgatcgat
     2101 caaagtagta ttgtcgatgt gctggctgtc gcgggcaata tagaccccat tgaggttggt
     2161 atgcgcaccc ggctcttcac aagcaacgtg aatttcactg cggctcaatt gtccgcctat
     2221 cgagaggaca aaactgtcat aaatcgaatc tttaccgacc ctggctttga cggtcgagag
     2281 attgatgcca gtggcactgt cttcaagcaa ccggtagtgt tttacgtgag agctgccagc
     2341 aacgctgact tcgaacccat gattggcaag ataactgcct tcacctaggt gtctttcaag
     2401 aatggtcatc cgagcgttgt cttttgccaa aattaaattg cgcggatgat tagaattaga
     2461 ggcgcccgtc tggctgacaa aaaccacttc gatgggattt tcaagctctg tattttcaac
     2521 gatgatgaca aaaccgtctt cgataaaggc tgtattaagc gccaatacag gagcatcttt
     2581 aaacccgcca atttggccga gatgttccgc catcaaatcc tcatccgaag tcattgcttc
     2641 ggctaatgat aaaactctga cgccatccgg cagatcgccg attgctgaaa gttcttggct
     2701 atagtgccca ttaacaaaaa ctagtttgtg ggttgctaaa tctgccggca accaagtcag
     2761 ctcagtagga tcaatcgctg cggcctcggt tgttctagcg acatcgagct tttccagcac
     2821 cttgagattg gtgtatttcc attcttcaac gtccggtgtc ggcaggccag aggaggcaaa
     2881 tctttcaatt ccttctttcc gaagaccgtc cagccacggc acagttgcac caaacttagc
     2941 atcaccatgc tgagcaataa agctctggct taggggtgaa agctcattca ttaggccgct
     3001 acctccgtat aattggcata gccgtttttt tctaattcaa gggcgagatt tttatcgccg
     3061 ctatcgacaa ttttaccatc gaccaatacg tgcaccacat cgggcacaat ataatcgagc
     3121 aggcgctgat aatgggtgat caccagcatc gaacgctcag gcgaccgcaa ggctgtcacg
     3181 ccttcgccga cgatgcgcaa cgcatcgaca tccaagccgc tatcggtttc atccaaaatg
     3241 gcaaagctcg gattgagcac agccatctgc aagatttcgg cgcgtttttt ctcaccgcca
     3301 gaaaagccga cattaaccgc ccgtttcagc atatcgtcgc cgatatttaa aatcttggtc
     3361 tgttcacgga cgaactttag aaagtccatg gcatcaaatt cgctttcacc gcgatatttt
     3421 cgcacggagt tcaccgcagc ttttaagaaa tttattgtcg aaactccggg gatttccacc
     3481 ggatattgaa aagcca
//
LOCUS       DASCNL010000854         1049 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001763798, whole genome shotgun sequence.
ACCESSION   DASCNL010000854 DASCNL010000000
VERSION     DASCNL010000854.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001763798"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="QF359_11215"
     CDS             complement(<1..545)
                     /locus_tag="QF359_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJO87521.1"
                     /translation="MNEILSSGAGVLFRDDLATSEAPVVTAIPHQLAVKRLTLTDFRC
                     YNQQRLEVDARPILLTGPNGAGKTNLLEALSFLVPGRGLRRARLNEINRRAGDGTIAA
                     QQWAVAAKLFIGDNEINIGTGCEIGEASENGSNGRDKRVTKIDGTVVKNQAELGHYTS
                     AQWLTPQMDRLFLEGASGRRF"
     gene            complement(610..>1049)
                     /locus_tag="QF359_11220"
     CDS             complement(610..>1049)
                     /locus_tag="QF359_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HJO87522.1"
                     /translation="KIKFAFEGTVLTSKLIDGTFPDYVRVIPENNEKVLEVETDVFAH
                     AVDRVSAISTEKSRAIKLTITKGNLTLSANNQDNDTATEEVPADYDESEIEIGFNSRY
                     LLDIAQQIEGDRARFTLADAASPTLVQDPDDQGAIYVLMPMRV"
BASE COUNT          233 a          274 c          268 g          274 t
ORIGIN      
        1 aagaagcggc ggcccgatgc cccttcgagg aacaggcgat ccatttgtgg tgtcagccat
       61 tgtgcgctgg tataatggcc aagttcggcc tgatttttga ctacggtgcc atcaatctta
      121 gtgacgcgct tatcgcggcc atttgagcca ttttcagagg cttcgccaat ctcacagccg
      181 gtgccgatat taatctcgtt gtcaccaatg aacagcttag cggcaaccgc ccattgctgg
      241 gcggcaattg taccatcccc cgcccggcgg tttatctcgt ttaacctagc gcgtcgcaag
      301 ccccggcccg gcactaaaaa agacagtgct tccaataagt tggtcttgcc ggcaccgttt
      361 gggccggtaa gtaaaattgg gcgcgcatcg acttccagcc gttgttggtt gtagcagcga
      421 aaatcggtta aagtgagacg ttttaccgcc agctgatgag gtatggcggt cacaacaggc
      481 gcctcactgg tggcgaggtc gtcgcggaat aatacacctg caccgcttga taaaatttca
      541 ttcacgcctt tttaccaacg ggtctggcca tttgcggtaa tgctaaaggc ttccagttga
      601 atatattcat taaactctca tcggcatcag cacatagatg gccccttggt catccggatc
      661 ctgtaccaat gtcggtgagg cggcgtcggc gagcgtaaac cgtgcccgat ccccttcaat
      721 ttgctgcgca atgtcgagca gatagcggga attaaagccg atctcgatct cggattcatc
      781 gtaatccgcc ggcacttcct cggtggccgt gtcattatcc tggttattgg cggaaagcgt
      841 taaattacct ttggtgatcg tcagttttat ggcgcgtgat ttttccgtcg aaatagcgga
      901 aacccgatca accgcatggg caaaaacatc tgtttccact tcaagtactt tttcgttgtt
      961 ttccgggata accctaacgt aatcagggaa agtaccgtcg atcagtttcg atgtgagcac
     1021 cgtgccttcg aaggcaaatt ttatcttgg
//
LOCUS       DASCNL010000855         1477 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001763929, whole genome shotgun sequence.
ACCESSION   DASCNL010000855 DASCNL010000000
VERSION     DASCNL010000855.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001763929"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="QF359_11225"
     CDS             complement(<1..518)
                     /locus_tag="QF359_11225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87523.1"
                     /translation="MKHSKLLLSTALAGALVTGLAAPTQAQKYNLTLSGASPGGLWSR
                     IGGGIDAAIAKAYPGSTVSYQTSSGGLANVPLVSRGKVPMGLATDGELNAIVKGYEGR
                     KAVSNVRVLFRVYTPASRFQQSFLAVTKSFADKHGIKTFKDIVSKKLPIRIAINRRGN
                     FDANVGEAAMTM"
     gene            complement(541..>1477)
                     /locus_tag="QF359_11230"
     CDS             complement(541..>1477)
                     /locus_tag="QF359_11230"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HJO87524.1"
                     /translation="RILDFRSFNWMSAQVLSVLAPLSVGATLLLARKFSSSHFFNWIK
                     EHQATIAAGNPTTINMLFNRPADIKGPDIPHLRYITSSSAPLLIQDWQQFETLYEVKV
                     CQGYGASEVGWISASNENCRKRGSVGKPLAYQNLIIVDDDGVQLPADDIGYVELGPSA
                     ETEFKYLGADGEQQVAAKGRVNTGDMGYIDKDGYLFISGRRKDLIIRGGINISPLEIE
                     NVILTLPGIVEAATFGIEDKIYGEAIVAAVVLQDQSTLSPEDVINHCQQNLSTVKLPE
                     RVDIIEQLPKTDRGKLDRRSLKELWSQNQTLKSSI"
BASE COUNT          379 a          368 c          332 g          398 t
ORIGIN      
        1 aacatggtca tcgctgcttc accaacgttg gcatcaaaat taccgcggcg gttaatagca
       61 atgcggattg gcagtttttt gctgacgata tctttgaagg ttttaatacc atgcttatcg
      121 gcgaaagatt ttgtcactgc caagaagctc tgttgaaagc gcgacgctgg cgtatataca
      181 cggaataata cgcgaacatt acttactgct tttctgcctt cataaccttt tacaatggca
      241 ttcaattcac cgtctgtagc caatcccatc ggcactttac cgcgcgagac gagcggcaca
      301 ttggcgagac caccggaaga agtttgatag ctcacggtcg aaccgggata ggctttggcg
      361 attgcggcat cgatgccacc accaatccgg gaccacagcc cacctgggct cgcgccactg
      421 agggtgagat tgtatttttg tgcctgagtt ggggctgcca aaccggtcac caaagcaccg
      481 gcaagtgcag tgcttaaaag taatttagag tgtttcataa ttaagcctct cctttaggtt
      541 ttatattgac gatttaagtg tttgattttg cgaccagagt tctttgagac tccttctgtc
      601 tagttttcca cgatccgttt tgggcagttg ttcaataata tccacccgct ccggtaattt
      661 gaccgtagat aggttctgct ggcaatggtt gattacatct tctggcgata aagtgctttg
      721 atcctgcaac acgacagcag ccactatagc ttcaccatag attttgtctt caatcccaaa
      781 agttgccgct tcgacgatgc cgggtagtgt taatataaca ttttcaattt ccaggggtga
      841 tatattgata ccaccgcgaa taataaggtc tttccgccgg ccagaaataa acagataacc
      901 gtctttatcg atataaccca tatcaccggt atttacgcgt cctttggcgg caacttgttg
      961 ttcgccatct gcaccaagat atttaaactc agtctccgca cttggtccca attcaacata
     1021 gccgatatca tcggccggca attgaacgcc atcgtcatca acaattatca aattttggta
     1081 agccaaaggc ttgccgaccg accctcgttt gcggcagttt tcattgctag cggaaatcca
     1141 gccgacttcg ctggcgccat aaccttggca aactttaacc tcatagagcg tttcaaattg
     1201 ctgccaatcc tggatcaaca acggcgctga actcgacgtg atatagcgga gatggggaat
     1261 atccggacct ttaatatcgg ccggccggtt gaacagcata ttgatcgtcg ttgggttgcc
     1321 tgccgcaatt gttgcctgat gctctttgat ccagttaaaa aagtggctcg acgaaaactt
     1381 gcgtgccagc agtaaagtcg cgccaactga caagggcgcc agcacactca acacctgagc
     1441 cgacatccaa ttaaaagaac gaaaatctag aatgcgg
//
LOCUS       DASCNL010000856         2088 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001764657, whole genome shotgun sequence.
ACCESSION   DASCNL010000856 DASCNL010000000
VERSION     DASCNL010000856.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001764657"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="QF359_11235"
     CDS             complement(<1..256)
                     /locus_tag="QF359_11235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87525.1"
                     /translation="MIRFLVLLLALADGTFSAHAQDKAPDLSAFSPETRKEYEATQKF
                     IDQTQSKITLVRTQTEARAKEIEALANRVDKIITKMSSQGE"
     gene            complement(606..1094)
                     /locus_tag="QF359_11240"
     CDS             complement(606..1094)
                     /locus_tag="QF359_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HJO87526.1"
                     /translation="MRTYDFSPLFRHSVGFDRMQRLLDSALDHSQTSANSYPPYNIEA
                     VGEDAYRISMAVAGFSEADLEIIAKDNALSVKGKIKSEDETAFLHRGIAGRAFERRFD
                     LADYVKVTDAHLENGLLHIDLVREVPEAHKPRKVEIKHGTAPSLAEKAKKLIGGDSKK
                     AA"
     gene            1481..>2088
                     /locus_tag="QF359_11245"
     CDS             1481..>2088
                     /locus_tag="QF359_11245"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87527.1"
                     /translation="MTPLNNQKQLLGIILMVLAVFLFPLKDAIAKMTGGYYSAIVIMW
                     AQMVFASLFYVPIITIKYGPGILLPRKLFLQILRAILVITGMCMFYWAISLVPLAEAT
                     AISFVAPLVITAVSPFMLGEKIGLRRWLAVLAGFIGVLIVLRPEFSGDRLGYMIAFGA
                     GLSVGFFYLCNRLLADAAPPIANLTYSAIIGAILLTPLIFSV"
BASE COUNT          480 a          471 c          517 g          620 t
ORIGIN      
        1 cttcgccctg gctcgacatt ttggtgatga ttttatcaac ccgattggcg agcgcctcta
       61 tttccttggc ccgtgcttcg gtctgggtgc ggacgagcgt gatcttgctt tgagtctgat
      121 cgatgaattt ctgagttgct tcgtattctt ttctggtttc cgggctaaag gcgctgagat
      181 cgggcgcctt atcttgggcg tgcgcgctga aagttccgtc agccaacgcg agtaataaaa
      241 ccaaaaaacg gatcatcagc cgcaactccc caaacaattt attattggct caatgctaaa
      301 ccaaaaccgc tatcggagtc attaggggag ttgcattcat atttttttcc tccgtccagc
      361 gtcatgcgtg gatgtgatcc acgtatcccg cttcacaatg ttttctgtgg tttgactact
      421 tcgtgtgctt cgttaacttt gtggttgcga acacacttca acgcactagg tggggaaacg
      481 ttaggcggct gtttgaaagg ttgatagatg gtgccaagaa catgtccccg gaaaggaaac
      541 ggggacacgt aacccaccta ttttctgtgg catgtcccca taattgttgg gagaagtttt
      601 aaactttaag cggctttttt ggagtcgcca ccaatgagtt tcttagcttt ttcggccagc
      661 gaaggcgctg tgccgtgctt gatctcaact tttcgtggtt tatgggcttc cggtacttcg
      721 cgcaccagat cgatatgcag cagaccgttt tcgagatggg catcggtcac tttgacataa
      781 tcggccaaat caaaccggcg ttcaaaggcg cgcccggcta tgccgcgatg gagaaaagca
      841 gtttcatctt cgctttttat cttacctttc acggacaagg cattgtcctt agcaataatt
      901 tcgaggtcag cttcgctaaa gccggcaacg gccatggaaa tccggtaggc atcttcgccg
      961 accgcctcga tattataggg tggataagaa ttagccgagg tttgagagtg atcgagcgcg
     1021 ctatccagca aacgctgcat gcggtcaaat cctactgagt ggcggaatag gggtgaaaaa
     1081 tcatatgtac gcatcgcata tcctccttag aagcgatata aaaaataaga aattcgccaa
     1141 cattggccga attccggttc atggcccaac agccttaaga ccctgcaata ggcgtcccaa
     1201 gagataatcg ttggactacg atttatgtag tttatgcggt caactacgca aggtgtgaat
     1261 taagaaaatc ggctaaattt tttgcgttgg gcgggatttt ttcttgggat catcaagcac
     1321 gtacgcgatc gccgccagac cgctaaacat ggtgatggag agataaacga atgccatttt
     1381 tttgctcttt ttaaattaat gttctctgat gctttcatat ttggcaaatt cctttaaaaa
     1441 atcagttaat tatcaaaatt cttgccgaca aaggaccgta atgacgccgc taaataacca
     1501 aaaacaactc ctcggtataa ttctgatggt gctggcggtc tttttgtttc cgctgaaaga
     1561 tgccatagcc aaaatgaccg gcgggtacta ttcagccatt gtcattatgt gggcgcagat
     1621 ggtgtttgcc agtctgttct atgtgccgat catcacgatc aaatacggtc ccggtattct
     1681 gctgccgcgg aaattatttt tgcaaatatt aagggcgatt ttggtgatta ccggcatgtg
     1741 tatgttttat tgggcgatta gtttggtccc tttggcggaa gcaacggcaa tttcttttgt
     1801 cgcgccgctg gtgatcacag cggtttctcc cttcatgctg ggtgagaaaa ttggactacg
     1861 acgctggctt gcggtgctgg ccggattcat tggagtttta attgtattac ggccggaatt
     1921 tagtggcgac cggttaggtt atatgatcgc ttttggcgca ggcctgtcgg ttggtttttt
     1981 ctatctttgt aatcgccttc tggctgatgc cgctccgcca attgccaatt tgacctattc
     2041 cgcgatcatt ggggcgatcc tgctgacacc tttaatattt tccgtttg
//
LOCUS       DASCNL010000857         9717 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001764729, whole genome shotgun sequence.
ACCESSION   DASCNL010000857 DASCNL010000000
VERSION     DASCNL010000857.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 9717)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9717)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9717
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001764729"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1220)
                     /locus_tag="QF359_11250"
     CDS             complement(<1..1220)
                     /locus_tag="QF359_11250"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO87528.1"
                     /translation="MEGLEFGFIMLGVLLVLIALRLPIAIAMITVGVAGYLTLAGWTP
                     LLNYFNSAAYWRFSTYDLSVVPLFLLMGQFATHAGMSKALFDAANVFLGHKKGGVAMA
                     AIGGCAGFGSICGSSLATAATMGQVALPELRRFKYSGALATGALAAGGTLGILIPPSV
                     ILVIYAVLVEANIATMFLAAFIPGFIAALGYMIVIFIYVRVSPKSGPSGEKSTRSERW
                     SALKEIWTVVLIFIIVIGGIYTGVFTPTEGAAFGAIGTGALAYFHGGMRREGFIDCVM
                     SAGQTTAMIFLIILGADVLNVFLALTQLPQELAAMIGDAELSPLLVLSIILFFYLLGG
                     CIMDSLSMILLTIPIFWPILEAMDFGMNPEDVKVWFGIVALIVVETGLITPPVGMNVF
                     VINSMSKDIPIAQT"
     gene            complement(1220..1762)
                     /locus_tag="QF359_11255"
     CDS             complement(1220..1762)
                     /locus_tag="QF359_11255"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO87529.1"
                     /translation="MTGETETSTRPDPIGRVLFRLARALVIIGGACLTAAGILTVGSV
                     IGRYFFNSPIPGDFELVEMACAVAVFSFLPYCQLKKGNVLVDFFTYNSSPRTKGILDS
                     ISAIIYSAITVLLTWRLWVGGLDFLATNEQTVILQIPRAYVFIFIMPSMVLLVAATFY
                     TIWQHYYEAGVEHNPLESEL"
     gene            complement(1801..2838)
                     /locus_tag="QF359_11260"
     CDS             complement(1801..2838)
                     /locus_tag="QF359_11260"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO87530.1"
                     /translation="MKKFKLPFLAGAVAMTAAFGVNTVSAADFKIKLHHQTPPKAPVN
                     VFLLTPLQKALEKDSGGRISAQVYHSMSLGGSPPQVFNQIKDGITEIGWTLPGYSGGR
                     FPLTSVFDLPFMVSTAEATTQAFQAFADKHLQKEYKDVHPLLFHTAARFKIHMVKNQI
                     KSISDFNGLKVRATNRGMGELLKSVGATPVFMPVPKVPQALSKGVVAGAVLPWEIVIP
                     FKIQEIAPNHTLVKGPRGLIAATFFLGMNKKFYDGLPGDLKKVVDKNTGMNIAAKVGK
                     SYDKIENVFKAKAVKRGNKFYSLPAGDVATIKTSALKIQQAWVADVTKKGHNGKALLA
                     EANALIDKYSK"
     gene            3469..4200
                     /locus_tag="QF359_11265"
     CDS             3469..4200
                     /locus_tag="QF359_11265"
                     /inference="COORDINATES: protein motif:HMM:NF003952.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HJO87531.1"
                     /translation="MKVLAVIPARWASTRFPGKPLQEICGKAMIHWVWDQAIQAESVT
                     QIVIATDDDRIAEYCHANNLEVVMTADSHPTGSDRLAEVAQKIEADVYVNVQGDEPLI
                     EPATIDAVTECLLKAMEQRIEVATGYIEGATDAQLDDPSVVHLVPALDNSVITFSRLP
                     VPYPMAETMPRTVHVGLYAFTREALLRFPELERGPVERAESIEVMRYLEHGFRIVCVP
                     VEPGSIGVDTPEDLAEVEAILEAKV"
     gene            4197..4709
                     /locus_tag="QF359_11270"
     CDS             4197..4709
                     /locus_tag="QF359_11270"
                     /inference="COORDINATES: protein motif:HMM:TIGR01670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HJO87532.1"
                     /translation="MSKLSEQQFMGRLAGLKLLSLDTDGVLTDGGLYYTDDGAELRKF
                     NVKDGMGIKRAQKSGVKIAIITSSLTPAIAHRGQRLGVDYVQLECEDKLASIVEICDS
                     LGIDLDQVGHVGDDLNDLPVLAAVGCPMSVADATTEAISAAVYVTKKKGGDGAVREIC
                     DLIVTAKNAV"
     gene            complement(4907..5410)
                     /locus_tag="QF359_11275"
     CDS             complement(4907..5410)
                     /locus_tag="QF359_11275"
                     /inference="COORDINATES: protein motif:HMM:NF024773.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HJO87533.1"
                     /translation="MLSLKNAIPNGEAVKPTMEPLTYSDEHIASIFKHVQSIAMVGAS
                     PKPHRASYRVMKFLQDRGYRVIPVNTRKNDDFIHGEKVYNTLAEIPDDFQMVDIFRNI
                     TGAVEITNEAISLAAEKSIDTIWMQLEIRSDQAAERVETAGLNMVMDRCPAIEIRRLV
                     GSGHLPA"
     gene            complement(5367..6158)
                     /locus_tag="QF359_11280"
     CDS             complement(5367..6158)
                     /locus_tag="QF359_11280"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HJO87534.1"
                     /translation="MPASNNETILLREDKDGICTLTLNRPEKRNAMSTELIAELQNAF
                     DTIADDKSVKVIILAGNGPIFSSGHDLREIRGDSSYETIHALFQQCSNLMISMKKQPQ
                     PIIARVHGIAMAAGCQLMASCDLAVSVDTAKFAVPGVTNGLFCSTPAVALSRAASPKH
                     TMEMLLMGDLFSAKDALRFGLINKVVKPEELDAAVMEYAASIASRSTLTMSMGKPTFY
                     AQLDMELAEAYAYTTEVMAKNMQEYDAQEGIDAFLEKRDPEWRGR"
     gene            6459..6938
                     /gene="rplM"
                     /locus_tag="QF359_11285"
     CDS             6459..6938
                     /gene="rplM"
                     /locus_tag="QF359_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HJO87535.1"
                     /translation="MSTYSQKPAEVEREWFVIDAEGLVLGRMASIVAMRLRGKHKPTY
                     TPHIDCGDNIIIVNAEKVGLTGNKRDDKTYYWHTGYPGGIKSRTADKILDSDHPERVV
                     IKAIERMISRNPLGRKQMKKLHVYAGNDHPHEAQKPQNLDIAAMNPKNSVNRAIGSN"
     gene            7061..7486
                     /gene="rpsI"
                     /locus_tag="QF359_11290"
     CDS             7061..7486
                     /gene="rpsI"
                     /locus_tag="QF359_11290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HJO87536.1"
                     /translation="MADVTAVEPQIDEHGRSYATGKRKDAVARVWIKPGSGKIVVNGR
                     NIETYFARPVLRMMINQPFGIAERADQYDVNCTVKGGGLSGQAGAVRHGISKALVLYE
                     PALRPPLKKEGFLTRDSRVVERKKYGRRKARRSFQFSKR"
     gene            7759..8148
                     /locus_tag="QF359_11295"
     CDS             7759..8148
                     /locus_tag="QF359_11295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87537.1"
                     /translation="MLAKLNDNVAALVLGIYLLGILLYVVQLLFMTEIWLKGEEVDIS
                     AMTVARVLGSAWLGLGLGVVLTFLNGPDGQKTFFTTLLVAQVATLLVILHSHFIANEP
                     RTGDDAAIVSVLTILFLIGWFRIKDRL"
     gene            8343..8654
                     /locus_tag="QF359_11300"
     CDS             8343..8654
                     /locus_tag="QF359_11300"
                     /inference="COORDINATES: protein motif:HMM:NF013866.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJO87538.1"
                     /translation="MQAAARFDVDGVVSFHGSFVENFLGELADVNCPLAFHYGDNDAI
                     APMAAIDKVKAVCENRDNAEVFVYPGGQHGYMFPNRGAGYLAEAAQLSWDRTFEFLNN
                     L"
     gene            8672..9457
                     /locus_tag="QF359_11305"
     CDS             8672..9457
                     /locus_tag="QF359_11305"
                     /inference="COORDINATES: protein motif:HMM:NF004781.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HJO87539.1"
                     /translation="MTDKIISKVEDGIGWIIYNNPERRNAVSLAMAEKVAEVIESHGT
                     NEAVRVVIIRGEGSKSFVAGQDISEFEELRSTPDGLERYERITDNMYQGVRNCPKPVI
                     AMIEGYCMGGGMALACSCDIRICSDNSVFAIPAGRLGIAYRPNFTRWMVEVVGASTTK
                     EILFTARRYNAVEALQLGLVNRVTSVDDLAGYVLEYAQSITENAPLSVRATKAIVNIV
                     GDSPGEWDREAMQKFIDACSNSEDYIEGRRAYMEKRTPQFKGK"
BASE COUNT         2511 a         2263 c         2495 g         2448 t
ORIGIN      
        1 aaggtctgag cgatgggaat atctttcgac atcgaattta tgacaaacac attcatgccg
       61 actggcgggg ttattaaccc ggtttcgaca acgattaggg caacgatgcc aaaccagact
      121 tttacgtctt ctggattcat accgaaatcc attgcctcca ggatcggcca gaaaattgga
      181 atggtcagga gaatcatcga cagagaatcc atgatgcagc caccgagcag ataaaagaac
      241 agaattattg ataataccag cagaggcgat aattcagcat cgccgatcat ggctgccaat
      301 tcttgtggta gctgggtcaa cgctaaaaac acgttgagga catcagcgcc aagaatgatc
      361 agaaatatca tcgcggtggt ctggcccgca ctcatgacgc aatcgataaa cccttctctg
      421 cgcatgccac cgtggaagta agccaatgcg cccgtgccaa tagcgccaaa tgccgcgcct
      481 tccgtcggcg tgaagacgcc ggtataaatg ccgccaatta cgatgataaa aatcagcacg
      541 acggtccaga tttcttttaa tgcgctccat cgttcggagc gagtggactt ttcaccggag
      601 gggccggatt taggcgaaac ccgtacataa atgaagatga cgatcatgta gccgagcgcg
      661 gcgatgaagc cggggatgaa agccgccaag aacatggtgg cgatattggc ttcgacgagg
      721 actgcataga tcaccagaat gacagatggt ggaattaaaa taccgagggt gccgccggca
      781 gccaacgctc cggtcgccag agcaccggaa tatttaaatc gtctaagttc gggaagggct
      841 acttgaccca tggtggctgc cgtggcgaga gaagatccac aaattgagcc aaacccggcg
      901 cagccgccga tcgcggccat cgcgacaccg ccttttttat gaccgagaaa aacatttgct
      961 gcatcgaaca aggctttgct catgccggcg tgggtggcga attgccccat caacaggaac
     1021 agcgggacga cggaaagatc ataagtggaa aaacgccaat aggcggcgct gttgaaataa
     1081 ttcaacaggg gggtccagcc cgcgagagtt aaataacctg caacgccaac ggtaatcatc
     1141 gcaatagcaa ttggcaatct gagcgcaatt agcaccagca ggacgccgag catgatgaac
     1201 ccgaattcca agccttccat tataattcgc tctcaagtgg attatgctcg accccggctt
     1261 catagtaatg ctgccaaatg gtgtaaaagg tggccgcaac gaggagcacc atactgggca
     1321 tgataaaaat aaaaacgtag gcgcgaggaa tttgcagaat gacggtttgt tcattggtgg
     1381 cgaggaaatc cagaccgcca acccagagac gccatgtcag taagactgta atcgcgctat
     1441 aaattatggc actgattgaa tcaagaattc ctttggtgcg gggcgatgaa ttataggtga
     1501 aaaaatctac cagcacattg ccctttttaa gttggcaata gggcaggaag gaaaaaaccg
     1561 caacggcaca ggccatttcg accaattcga aatcacccgg tatcggtgaa ttaaaaaagt
     1621 atcgtccaat aacactgcca acggtaagaa taccggcggc agtcaaacaa gctccgccga
     1681 taataaccag tgcccgcgct aaacgaaata gcacccggcc aattggatca ggccgggtgc
     1741 tggtctctgt ttcgcctgtc ataggctaag tattagtcga ttgtacggta tcaatcgagc
     1801 ctattttgaa tatttatcaa ttagggcgtt ggcttcagct aacaaggctt taccgttatg
     1861 ccctttcttg gtgacgtcgg cgacccaagc ttgctgaatt ttaagcgccg aggttttaat
     1921 cgttgcaaca tctcccgccg gcaatgaata aaatttattg ccccgtttta cggctttggc
     1981 tttgaagacg ttttcaattt tgtcataaga tttaccaact ttcgcggcaa tattcatgcc
     2041 ggtattttta tcgacgactt ttttcaaatc tccaggcaat ccgtcataga actttttatt
     2101 catacccaag aagaaggttg ccgcaatcaa tccacgcggt cctttgacca gggtgtggtt
     2161 gggggcgatt tcctgaattt tgaaaggaat aacgatttcc cacggcagga ctgcgccggc
     2221 taccacacct ttagatagtg cttgtggtac tttcggcacc ggcataaaga ccggcgttgc
     2281 accaacggat ttcaaaagct cacccatacc acggttggtg gcgcgtactt tcaggccatt
     2341 aaaatcgctg atcgatttaa tctgattttt taccatatgg attttgaacc gtgcagcggt
     2401 gtggaacagc aacggatgaa cgtccttata ttctttctgc agatgcttat cagcaaacgc
     2461 ctgaaaggcc tgagtagtgg cttcggcggt tgagaccata aatggtagat cgaataccga
     2521 ggtcagcgga aagcggccac cgctataacc aggcagcgtc caaccgattt cggtgatgcc
     2581 atctttgatc tgattaaata cttgcggtgg gctaccgccg agggacattg aatgatagac
     2641 ttgcgctgaa atccggccac cggaatcttt ttctagggct ttttgtaatg gtgttagcag
     2701 gaaaacatta actggtgctt ttggtggcgt ctggtggtga agtttgattt taaaatcagc
     2761 cgccgacaca gtattgacac cgaacgcggc ggtcatcgct acggcacctg ccaaaaatgg
     2821 caacttaaat tttttcatcg aaagttcctc ccaataaaga ttgtaattca ttaacgcagt
     2881 actgtggcac aaactgcccg acacagccac caattatttg caagtgtttc acattaaaaa
     2941 caacggtgtt ctgtgactaa ttctcaacaa ataattagat tgataatcac caataattga
     3001 gtagccggtg ttccgcgcaa ccacaatcgg aaaaaaaagc gtccacggcc cagtttggtt
     3061 taaagcagtt gttcctctcg cagggctatg gaactataat atcagtggac ccatggtgaa
     3121 ttttgaatcg atatatcgac gatctagtaa tcgtctcata tccgcagttt tcctggcttt
     3181 atttggagta gttttggcct taacgccggt tcaagctcaa cagaagcctc tgcgaatcgg
     3241 cgccttcctg tcgctgatgg gacagggatc cttccttggt gcaccagcac ttgcgaccct
     3301 taaactttat atcgatcttt tgaatctcca gggtggacag tgggtgccga ttgaatagag
     3361 tatatttagg tgacagcata cttttttata gaattaggag acagcttact tcattgcaaa
     3421 aaagtaaccc gggttagatt agttatggac agacataaag gataatagat gaaagtactc
     3481 gctgtcattc cggcccgctg ggcatcgacc cgctttcccg gcaaaccgct gcaggaaatt
     3541 tgcggcaagg cgatgatcca ttgggtgtgg gatcaggcca tccaggctga aagcgttacg
     3601 caaatagtga tcgcgacaga cgatgaccgc atcgccgagt attgccacgc caataatctt
     3661 gaggtggtga tgaccgctga tagccatccg accggcagtg accgtctcgc cgaagttgcc
     3721 caaaaaatcg aagcagacgt atatgtcaat gttcaaggtg atgagccctt gattgagccg
     3781 gcaaccattg atgcagttac ggagtgtttg ctgaaagcga tggagcagag gattgaagtg
     3841 gcgaccggct atattgaagg agccaccgat gcgcaattgg atgacccttc agtagttcat
     3901 ctggtgcctg ctcttgataa tagcgttatc accttctcac ggctgccggt gccgtatcca
     3961 atggcggaga cgatgccacg gacggttcat gtcggactct atgcgtttac ccgtgaggcg
     4021 ttgctgcgtt ttcccgaact tgaacgagga ccagtagagc gcgccgagag cattgaggtg
     4081 atgcgctatc ttgaacatgg ctttcgcatc gtctgtgtgc cggttgagcc gggctctatt
     4141 ggagtcgata cgccggaaga cctggccgag gttgaagcca tattggaggc aaaagtgtga
     4201 gtaaattatc cgaacagcaa tttatggggc gcttggccgg gctgaagtta ttatcgcttg
     4261 atactgatgg cgtcctcaca gatggtggtc tttattacac cgatgacggt gctgagttgc
     4321 gcaaatttaa tgtcaaagac ggtatgggca tcaaacgggc gcaaaaaagt ggcgttaaaa
     4381 ttgctattat cacctccagt ttgacgccgg cgattgcgca tcgggggcag cgcctgggcg
     4441 tcgattatgt ccagcttgaa tgtgaagata aattggcatc aatcgtcgaa atttgtgaca
     4501 gcttggggat cgatttggat caagttggtc atgttggtga cgatctcaat gaccttccgg
     4561 ttttggcagc tgtcgggtgt ccgatgtctg tagccgatgc gacaaccgaa gccatttctg
     4621 ctgccgttta tgtaaccaaa aagaaaggcg gcgatggcgc ggtgcgcgaa atttgtgatc
     4681 ttatcgttac agcgaagaac gctgtttagg cagaaggtgg tgaaatgagc accatcatga
     4741 agcgatcaaa aacgtagctg aagcgatcgc ccgtaatgga taattctaaa aattcatatg
     4801 cgcgtcgttt cagcaagatc ggcactaccg atatcacacg aaattaacga tcctgttata
     4861 tcgtataatt tctaatcgaa atcttaatag gtgtcattgt ctcagatcaa gcaggtagat
     4921 gtcctgatcc gacgagacgc ctgatttcaa tggctggaca acggtccatg accatattga
     4981 gcccagcggt ctcaactcgc tcagccgctt gatcactgcg aatttcaagc tgcatccaaa
     5041 tggtatcaat gcttttctca gcggcgaggg agatcgcttc atttgtgatc tcgacggcac
     5101 cggtaatatt gcggaagata tccaccatct gaaagtcatc tggaatttcg gcgagagtgt
     5161 tataaacttt ttcgccgtgg atgaagtcat catttttacg cgtgttcacc gggatcaccc
     5221 ggtagccccg atcctgaaga aacttcatca cccgatagct ggctcggtgc ggtttagggc
     5281 tggcgccaac catggcgatg ctctgaacgt gtttgaagat gctggcgatg tgctcgtcgg
     5341 aataggtgag aggttccatt gttggcttaa cggcctcgcc attcgggatc gcgtttttca
     5401 aggaaagcat caatgccttc ctgagcatca tattcctgca tatttttcgc catcacttcg
     5461 gtggtgtagg cgtaggcttc ggctaattcc atatcgagtt gcgcgtaaaa tgtgggtttg
     5521 cccattgaca tcgtaagcgt cgagcggcta gcgatactcg cagcgtattc cattactgcc
     5581 gcgtccagct cttccggttt gacgaccttg ttgatcaggc caaagcgcaa ggcatccttg
     5641 gcactaaaga gatcacccat caacagcatt tccatggtat gtttgggact ggcagcgcgg
     5701 cttagcgcga cggccggggt cgagcaaaat aagccattgg tgactccggg gacggcaaat
     5761 ttcgcggtat caacagagac ggccagatca caactcgcca tcaactgaca gccggcggcc
     5821 atggcgatac catgcacccg ggcgataatc ggctgcggct gctttttcat cgagatcatc
     5881 aaattactgc attgctggaa cagtgcatgg atggtttcat agctcgaatc gccgcgaatt
     5941 tccctgaggt catggccgga actaaaaatc ggaccgttac cggcgaggat gatgactttg
     6001 accgacttgt cgtcagcgat ggtatcaaag gcattttgca gctcggcgat gagttccgtc
     6061 gacatggcgt tgcgcttttc cggacggttt agcgtcagcg tacagatgcc atctttatct
     6121 tcgcggagaa gaatagtttc attgttgctg gccggcattt aatactccca agtttttact
     6181 actatttact gctggggcag attgccgcga ttgacaccca tttcgcaacc gctaaattga
     6241 cgcttcgtcg gtgtgaccgg attcaaatag tgatcaattc taccagccat attgtggtaa
     6301 tattatacct cattcataac cttttgatta taaacaataa aattaatatt atttgcattg
     6361 actaggcaga ttatcctggc atactccgcg ccgaaattga aggtatcctt attcttaatg
     6421 accggatgcc gtcagtatat tttgagattg gattcgagat gagtacatat tcgcaaaagc
     6481 cggccgaagt cgaacgcgag tggttcgtga ttgacgctga aggtttggta ctgggccgga
     6541 tggccagcat cgtcgcgatg cgccttcgcg gtaaacataa acccacctac accccgcata
     6601 tcgattgtgg cgataatatt attatcgtta atgccgagaa agttgggctg accggcaaca
     6661 agcgtgacga caaaacttat tattggcata ccggctatcc gggcggtatc aaaagccgga
     6721 cggcggataa aattcttgat agtgatcatc cggaacgcgt tgtcatcaaa gccattgagc
     6781 gcatgatttc ccgcaacccg ctgggccgca agcaaatgaa aaagctgcac gtttatgctg
     6841 gtaacgatca tccccatgaa gcgcaaaaac cgcaaaattt ggatattgct gcaatgaacc
     6901 cgaaaaattc tgtaaaccgc gctatcggga gtaactaatc atggctgaag aaaagaaaac
     6961 cctcgaagat ttgggtgaag ctgttgccgc cgccgctgaa actgaagctc cggcagaatc
     7021 tgctgaggcc ggtgaagaag ctgcagctgc gcctgttgct atagcagatg tcacagcggt
     7081 tgagccgcag atcgatgagc acggacgctc ctatgcgacc ggcaaacgga aagatgcggt
     7141 tgcccgcgtt tggatcaagc caggcagtgg caaaattgtc gtcaatggcc ggaatatcga
     7201 aacttatttc gctcgtcccg tgctgcgcat gatgatcaac cagccgtttg gcattgccga
     7261 gcgtgccgat caatatgacg tcaattgcac ggtcaaaggc ggtggcctct cgggtcaagc
     7321 cggtgccgtg cgtcatggta tttcgaaagc gctggttctg tatgaaccag cactgcggcc
     7381 tcctttgaaa aaagaaggct tcctgacccg tgacagccgc gttgtcgaac ggaaaaaata
     7441 tggacgccgc aaagcccgcc ggagcttcca gttctcgaaa cgatgatact acactagaaa
     7501 ttatagttta ttatcaagga gttctaattt agaacccctt tttatttcat tcacaaaata
     7561 ttcataatgc attgacatga cgtaggttac caaagtacgt tttttttgtt tatgcgcagt
     7621 tcatcatcaa caaactattc ttctcgaagg gacaaacttg gaatgctgat ttccaaaagg
     7681 gatatggctc ataaagtatg tttgcggagg ttcttaggca taactaatgt caactgatca
     7741 attttttagg aggaaaccat gttagcaaaa ctcaatgata atgttgcagc gttagtcctc
     7801 ggcatctacc tgctgggcat tcttttgtac gtcgtacagc ttcttttcat gaccgaaatt
     7861 tggctcaaag gtgaagaagt tgatatttcg gctatgactg ttgccagagt cctcggcagt
     7921 gcttggcttg gtctgggtct tggagtagtg ctgactttct taaatggacc ggacggccaa
     7981 aagacatttt tcacaacctt actggtcgct caagtcgcca cacttttggt aattctacac
     8041 agccatttta tagcaaacga gcctcgaaca ggcgatgatg cggcaatcgt atctgttctt
     8101 acgattctgt tcctgattgg ctggtttaga attaaagatc gtttatagga cgataataaa
     8161 ccgctttttt ggggattttc tggaccttgt agacatactt gctcaccgtg cctgctccaa
     8221 aggatggatt gtagtattgc ttccagaatg cggcctggct ctcgatgttt cccgcctagg
     8281 gtattgaccc agagtttagg gctggttcat cgccctatag tgccttcaac gggccctacg
     8341 tcgtgcaggc ggcggcgcga tttgatgttg atggtgtggt ctcgtttcat ggctctttcg
     8401 ttgaaaactt tctgggtgag ttggcagatg taaattgtcc actagcgttt cattatggcg
     8461 acaatgatgc cattgcgccg atggcggcga ttgataaggt caaagcagta tgcgaaaacc
     8521 gcgataatgc cgaggtcttt gtttatccgg gtggccaaca cggttatatg tttcccaacc
     8581 ggggagctgg ttatctagct gaggcggcgc aactatcctg ggaccggaca ttcgagttcc
     8641 tcaacaattt ataagcaaag attgaaattc tatgacagat aaaattatca gcaaagttga
     8701 ggatggtatc ggctggatca tctacaacaa tcccgagcgc cgtaatgcgg tctccttagc
     8761 aatggcagaa aaagttgctg aggtgattga aagtcatggt accaacgaag ctgtgcgggt
     8821 ggtcattatc aggggtgagg gcagcaagtc tttcgtcgcc ggtcaggaca tatctgaatt
     8881 cgaggaactg cgctcaacgc cggacggcct ggagcgctat gagcgtatca ccgacaacat
     8941 gtatcaaggt gtgcggaact gtccgaagcc cgtgatcgcc atgattgagg gctattgcat
     9001 gggcggtggc atggccctgg cgtgctcctg tgatatcaga atttgctccg acaattcggt
     9061 ttttgctatt ccagccggac gtttaggtat cgcctaccgg ccgaacttta cccgctggat
     9121 ggtggaagtc gtaggagcct cgacgaccaa ggaaatacta tttacggcgc ggcgttataa
     9181 tgcggtagag gcgttgcaac tcggcctcgt taatcgggtt accagcgttg atgatctggc
     9241 cggttatgtc ttggaatatg cccaatcgat taccgagaac gcaccgcttt ccgtccgcgc
     9301 cactaaagcc atcgtcaata ttgtcggcga tagccctggt gagtgggacc gtgaagcgat
     9361 gcagaaattt atcgatgcct gctccaacag cgaagactac atcgaaggcc gccgcgccta
     9421 tatggaaaaa cgcacccctc aattcaaagg caagtaatgt agtaaaggta ccaggtacgg
     9481 gtggagtgct tgtcaccatc gcgctaacta ttaacagcaa cgtaactagt atctcttcgg
     9541 cctgggaatc gtttgaagaa gggcagccca acaaagcgcg gctgctaaat cagctttggc
     9601 gtgacatcgg ttatggcggt ataattcatc agttgaagaa ttatgttctc cgccaggaca
     9661 agccacgtgt cgctaaaatt aaagcacgct tggcagcttc gtttaagata tgagaga
//
LOCUS       DASCNL010000858         2916 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001765682, whole genome shotgun sequence.
ACCESSION   DASCNL010000858 DASCNL010000000
VERSION     DASCNL010000858.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2916)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2916)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2916
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001765682"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1217)
                     /locus_tag="QF359_11310"
     CDS             complement(<1..1217)
                     /locus_tag="QF359_11310"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87540.1"
                     /translation="MRQSTLTLAVGILALVSVTNDALAQGKRGGTLRVAMNRTFNGFD
                     TATNPTVFPTKLNVQRAIYEDLFGLDEAGKLVSKLGTALKISPDQKVFTVTLRKDVKF
                     SNDEPLTARAYADHFKRALKSPMINFIRGQIGPVKDVVALDDHTVEFRMSRPHAGFRA
                     ALTGPFQFFWVNAPEHAKSMGPFVAKLPVGTGPYMLENWDQGVSLTLVRNPNYRYPEK
                     QYLDKIVMPLVAREEARLNGLKARNIDLYITNSGKLAKLAEKNPGIEVFGQVDQGSGI
                     VAFDTSKPPLNDIRVRKALAHAVDRKVEVQAALGGVGGILATDWFGPKSKWYCEGKTG
                     YPEYNPAKAMALLKDYGKPVKFKLSVLTFPVFMVGAQVYQSFWKRVGIDVEVDPRTPG
                     ASWVLPLLRGGFQS"
     gene            1316..1984
                     /locus_tag="QF359_11315"
     CDS             1316..1984
                     /locus_tag="QF359_11315"
                     /inference="COORDINATES: protein motif:HMM:NF019349.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HJO87541.1"
                     /translation="MTITRANNIRDVFEHEIISGQRPPGDRLDEPQLTRQFNASRTPV
                     REALVELASAGLVEMQPHRSAVVAEISVHQVIQMYEVLAELEGLSARLAARRMTEQER
                     SEFEALHMEIGQRIETANRGAFPALNKEFHNLIHLGAHNEVLSAQIDGLNKRLAPYRR
                     LFHEEPHDLSIPYAEHQSVVAAIRIRDEESADLIFRNHTALRADTITDFIAAFERRFE
                     RKIA"
     gene            2003..2287
                     /locus_tag="QF359_11320"
     CDS             2003..2287
                     /locus_tag="QF359_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87542.1"
                     /translation="MSEQAEINWTKVKNIFENVTERMGKNPDSPAIGAPKAKVRVIRE
                     RLFEATAEEHTSQIDEPVERGGCQIVTLVCLLCWPDHNPTLVRPTLALPL"
     gene            2342..>2916
                     /locus_tag="QF359_11325"
     CDS             2342..>2916
                     /locus_tag="QF359_11325"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJO87543.1"
                     /translation="MTDQTVIVTGAASGIGLACAKLLLARGARVTAFDIAGEKMAQNL
                     PVGEANLHLIAGDVSEPSLCQQVVAETLAQFGGLDALIHWGAAHSMARWDELGAEECN
                     RIMEINVTGTFLIAQAAAKPMIEQGKGAIVLCTSTSVLYGGTGGQGQGGPAYIASKGA
                     VIALTRSLARALGPDGVRVNAVSPGITETAM"
BASE COUNT          712 a          753 c          785 g          666 t
ORIGIN      
        1 gattgaaaac cgccacgcaa gagtggcaac acccaagatg cgccgggtgt acggggatca
       61 acttctacat cgatgccgac ccgtttccaa aaactttggt aaacttgcgc tcccaccatg
      121 aaaaccggga aggtcaacac ggaaagctta aacttgaccg gcttaccata gtccttaagt
      181 agcgccatgg ctttggcggg attatattcc ggatagccgg ttttaccctc acaataccat
      241 tttgatttgg gaccaaacca gtcggttgcc aatatgccgc cgacaccacc taaggccgct
      301 tgcacttcga ccttacgatc aaccgcatgg gccaaagctt tgcgtacgcg aatgtcattg
      361 agcggtggtt tggacgtatc gaaggcgaca atgccggagc cctggtcaac ctggccgaac
      421 acctcgatac cgggattttt ctccgccagt ttcgcgagct tgccggaatt ggttatatag
      481 agatcaatat tgcgggcctt gagcccattg agacgcgctt cttcacgggc caccagcggc
      541 ataacaattt tatcgagata ttgtttttcc ggataccggt aattgggatt gcgcaccagc
      601 gttagtgaca cgccctgatc ccagttttcc agcatgtaag ggccggtgcc aaccggcagc
      661 ttggcaacaa aggggcccat gcttttggca tgctccggcg cgttcaccca aaaaaattga
      721 aagggtccgg tgagggcagc ccgaaatccg gcatggggcc gtgacatccg aaactcaacc
      781 gtatgatcgt cgagagcgac aacatcttta actggaccga tttggccgcg aatgaaattg
      841 atcatgggac tttttagggc acgtttaaaa tggtcggcat aggcgcgcgc cgtcagcggt
      901 tcatcattgg agaacttaac gtccttgcgg agcgtgacgg taaaaacttt ttggtctggt
      961 gaaattttta gtgcggtgcc aagtttggag actagtttgc ccgcttcatc aagcccgaat
     1021 aagtcttcgt agattgcccg ttgaacattg agcttggttg gaaacacggt gggattggtg
     1081 gccgtatcaa agccattaaa tgtccggttc atggcaacgc gcaaagtacc gccacgctta
     1141 ccttgagcca gtgcatcgtt ggttacacta accaacgcca aaattccgac agccaatgtg
     1201 agagtagatt gcctcataat accaccctat aattaattta tacgaaattt attgaaatgt
     1261 atgacgattt tcgtaataca gtctacaaga aaaataaaat atataggaaa caattatgac
     1321 gataactcgt gcaaataata ttcgagatgt gttcgaacac gaaataattt ccggccagcg
     1381 gccaccgggc gaccgcttgg acgaacccca gttgacgcgc cagtttaatg cttcccgaac
     1441 accggtgcgt gaggccttgg ttgaactcgc ctcggcgggc ttagttgaaa tgcagcctca
     1501 tcgcagcgcc gtggtggccg agatcagcgt ccatcaggtt atccagatgt atgaagtgct
     1561 ggctgaattg gaagggctca gtgctaggct cgcagcccgg cggatgaccg agcaagaacg
     1621 atcagaattc gaagcgttgc atatggagat tggtcagcgc attgaaaccg ctaatcgcgg
     1681 cgcctttcca gcgttgaata aagaattcca caatttaatt catctgggcg cccataacga
     1741 ggttttgagt gcccagattg acggcctcaa caaacggctt gccccctatc gccgcctgtt
     1801 tcatgaagag ccgcatgatc tcagcatccc atatgcggaa caccagagtg tcgttgccgc
     1861 gatccgcatt cgtgacgaag agtcggctga cttaattttc cgcaaccaca ccgcgctccg
     1921 cgctgacact attacggact ttattgccgc gtttgaacgt cggtttgagc gtaaaattgc
     1981 ctagaaaaca aggaacggac caatgtctga acaagccgag ataaattgga caaaagttaa
     2041 aaacatattt gaaaacgtaa cggagcgtat gggtaaaaac cctgatagtc cagcgatcgg
     2101 tgctcctaaa gcaaaagtgc gggtgattcg ggagcgcttg ttcgaggcaa ccgctgagga
     2161 gcacacttct caaatcgatg aaccggtcga gcgcggcggt tgtcagatag taaccttggt
     2221 ctgtttgtta tgctggcctg atcacaaccc gacgcttgta aggccaaccc tggcactacc
     2281 tctctaaata acctaagctg agcacgtcca tttatcgcac caaatctggg gaaaaagttt
     2341 aatgactgat caaactgtca tcgtcaccgg ggcggccagt gggataggct tggcctgcgc
     2401 taagctattg cttgcccgag gggcgcgggt gacggcgttt gatattgcgg gcgagaagat
     2461 ggcccaaaac ctgcctgtgg gtgaggccaa tctgcacctc attgccggtg atgtctctga
     2521 gccctcttta tgtcagcagg tcgtcgccga gacgctggcg caatttggcg gccttgacgc
     2581 gctcatccat tggggggcag cacattcgat ggcgcgctgg gatgagcttg gtgccgaaga
     2641 gtgcaatcgc atcatggaga taaatgtcac cgggacgttt ctgatcgccc aggcggcggc
     2701 caagccgatg attgagcaag gtaaaggggc catcgtgctc tgcacctcga cctcggtcct
     2761 ctatggtggc accggtggcc agggtcaggg cggccccgcc tacatagcct cgaaaggggc
     2821 ggtgattgcg ctcacccgct cgctcgcccg ggctcttggc cccgatggtg tgcgtgttaa
     2881 cgctgtcagc cccggcatca ccgaaaccgc gatgat
//
LOCUS       DASCNL010000859         1269 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001770873, whole genome shotgun sequence.
ACCESSION   DASCNL010000859 DASCNL010000000
VERSION     DASCNL010000859.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1269)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1269)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1269
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001770873"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="QF359_11330"
     CDS             complement(<1..447)
                     /locus_tag="QF359_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0031554 - regulation of termination of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NusA N-terminal domain-containing protein"
                     /protein_id="HJO87544.1"
                     /translation="MYTHPELLLVADTVAREKGIDREEVLEAMEQAIQKAGRSKYGHE
                     HDIRAEIDRKSGEIKLARYIEVAEEIENETTQITLDVAKGRKEDAVIGEFFVDPLPPI
                     DFGRIAAQTAKQVIVQKVREAERKRQFAEFKDRIGEVVNGMIKRVEF"
     gene            complement(523..1005)
                     /gene="rimP"
                     /locus_tag="QF359_11335"
     CDS             complement(523..1005)
                     /gene="rimP"
                     /locus_tag="QF359_11335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HJO87545.1"
                     /translation="MGQEDRVREVITPALDCMGCELVRVQLSGDKRKTLQIMAERADG
                     ANMTVDDCAAISKEISALLDVDDPIRDAYSLEVSSPGIDRPLVRLKDFENYAGFDARV
                     DMYFLVEGRKKFKGKLLGIEDDKVSIRVKDEIYALPFGDIRRAKLLLTQELLDAAAQS
                     "
BASE COUNT          317 a          333 c          253 g          366 t
ORIGIN      
        1 gaattcaacc cgtttgatca taccgttaac aacttcacca atgcggtctt taaattcagc
       61 aaactggcgc ttacgttcgg cttcacggac tttttgcaca atgacttgtt tggcggtctg
      121 ggcggcgatg cggccgaaat caatcggtgg cagtggatca acgaaaaatt caccgatgac
      181 ggcgtcttcc ttacggccct tcgctacgtc aagcgtgatc tgagtagttt cgttttcaat
      241 ctcttcagcg acttcgatat agcgcgccaa ttttatttca ccagatttac ggtcaatttc
      301 agcacgaatg tcatgctcat gaccgtattt tgagcgtccg gctttttgga ttgcctgctc
      361 catcgcttcc agaacttctt cccggtcaat gcctttttcg cgagcgacag tgtcggccac
      421 caacagtagt tccggatggg tgtacattgt gcttgtttca gtgcttgtct ctgagttcgt
      481 atccataatt cgctgaccta tgtctcgtta attccgttac ctttaacttt gagccgccgc
      541 atcaagcagc tcctgggtca aaagcagttt tgcccgccgg atatcaccga acggcaaggc
      601 atatatttca tctttaaccc ggatggacac tttatcgtcc tcaataccga gtaatttacc
      661 tttaaatttt ttacgtcctt caactagaaa atacatatca acccgcgcat caaatccggc
      721 ataattttca aaatctttca accgcaccaa gggccggtcg atgccgggtg agctcacttc
      781 caaagaataa gcgtctctga tgggatcatc gacatccagc agcgctgata tttctttaga
      841 tatggcagca cagtcatcga cagtcatatt ggcgccatca gcccgctcgg ccataatttg
      901 cagtgtttta cgcttgtcac cgcttaattg aacccgcacc aactcgcatc ccatgcagtc
      961 taatgctggg gttatcactt cccgcactct gtcttcctga cccatagtca aaaatatgcc
     1021 ctattcaaat tggttaaaac tcactacgtc cgagatattc aagcggaaaa aagagagcct
     1081 aaaatgcaaa aaagtgggcc cacgagccca ccctcagaat tcctatatat ttggatatgt
     1141 ctaagaacgt cgtgtattct ctctctcaga agagaaaaat acaagctttt ttataaattt
     1201 taaggttttc agcagtttag tcgaacatcg ccaccgctcg tgtccaaccc gctgaagcgt
     1261 ccttaattt
//
LOCUS       DASCNL010000860         4726 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001773621, whole genome shotgun sequence.
ACCESSION   DASCNL010000860 DASCNL010000000
VERSION     DASCNL010000860.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4726)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4726)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4726
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001773621"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="QF359_11340"
     CDS             <1..450
                     /locus_tag="QF359_11340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87546.1"
                     /translation="YSSVAANILVPVAKGLFIKYRNSDTLQKIGLDTFESNNNLIGFA
                     NKIVRQKTDNVMFMFLPNRISYVTNLYELYSKGGKVFPDQDFLWHFAKKPCEKNALNC
                     LSLFPSLITDRIGVHEFAHDGHLNETGSRKVALAIFNYISTKFPMNK"
     gene            798..3374
                     /locus_tag="QF359_11345"
     CDS             798..3374
                     /locus_tag="QF359_11345"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87547.1"
                     /translation="MTYSTEGEQRFVNCTLAGPVEVFVRDGKIVRVLPLEYKEDDAPP
                     WTIEARGKTFTRPGKVGISCWVQGSKQMVYSKERLLSPLKRVDFDPDGERNPQNRGIS
                     GYEEISWDEALDIFAKETIRIRKKYGPSAVAVTGSSHDSWGNIGYRMSALDRFWNILG
                     CTWIDHSPESWEGFFWGAIHAWGFHWRLGQAPAYDLLEDTFKNTEMIVFWSSDPTTTS
                     GDYAWNETDAWRFHMKKLGIKFVFIDPFCNYTAVLDGDKWIKPKPGTDTTLALAIAHT
                     WMTEGTYDKEYVETRTHGFEKWADYVLGKEDGVAKTPKWAEEISGVKARDILALAREW
                     GAKTTTLAPGGRAGMSNAGRAAYGHEYTRMMVLLCAMQGLGKPGVNVYSTTGGAPADW
                     DFYFPGYADGGISGGSSGAIELGPRGFPDKGTSSQIRQRVARSVFPEAVMNPPVTWRG
                     VYGYYGQSAEQQFTECKFPFDGYSEIKMLFRQGSSYIGTMTDSNRWVNMYRHPNMEFA
                     VNQTIYNEPEARMADLVFPVCTNFERWDIGEWARISGYSRHLSPTNARVIVLQQKCIE
                     PLGESKPDYEIFAMLAKKLGIEERFTEGRTDFEWAKRMYEISDLPKVTNWEDFREKGY
                     YVVPVPEDYVGKPAFRWFAEGRPKDTDDWGPGLKDNPTLDGKGLSTPTQKIEFEAQTL
                     KRFDPNDEERPLVPKYIPSWEGTETEDLLKKYPLQLITPHPRFTFHSQHDGKDLWNEE
                     IPHQRRLKDGYRYTVMRMHPDDAAERDLKDGDLARVYNDRGTALSIITITPRMVKGVI
                     HSYGSGGGYDPQGDSPGDADNIDRGGTMNLLTSSRWISKNCPGMAPNSCLAEIEKWEG
                     AE"
     gene            3374..4195
                     /locus_tag="QF359_11350"
     CDS             3374..4195
                     /locus_tag="QF359_11350"
                     /inference="COORDINATES: protein motif:HMM:NF024644.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJO87548.1"
                     /translation="MARYGLVIDLDYCIGCYNCQIACKDEHVGNEFAPVAKSQPTFDH
                     FWVGIEEVERNYSDSRIEVTYIPTLSQSKNLLDVAKDGEVYERPDGIVIIDPEKAAGK
                     KELLDACPSGRVYWNEEANVAQKCTFCAHLLDSGWTEPRCVQSCPTSCMIFGDRDDPN
                     SEISKALANGTAQPYNPNETDPSVHYIGLPSPVVSGTVILGDCDECADGAVVTLLDKG
                     GAIANQSTDCFGDFLFKDLDVGKYKVKVEKDGYESNIAEIEVESDVTQLGDIILH"
     gene            complement(4433..>4726)
                     /locus_tag="QF359_11355"
     CDS             complement(4433..>4726)
                     /locus_tag="QF359_11355"
                     /inference="COORDINATES: protein motif:HMM:NF012382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO87549.1"
                     /translation="SHVDKVRRETDQARKKFIKDLSRFGVTMVPGAANFVLVKFPATQ
                     TNRKAVDAFRHLVSEGIIVRTNEDYGLDDYLRITIGTIEECDQVIDSLDRFFN"
BASE COUNT         1246 a         1081 c         1216 g         1183 t
ORIGIN      
        1 tattcgtctg ttgccgcgaa tatactcgtt ccggtcgcaa agggcctttt cattaaatat
       61 cggaattcgg atactctcca gaaaatcggg cttgatacgt ttgaatctaa taataactta
      121 attggatttg cgaataaaat tgtgagacag aaaacagata atgttatgtt catgtttctg
      181 ccgaaccgaa tttcctatgt cacgaatttg tatgagctat attcgaaagg tggcaaggtc
      241 tttcccgatc aggattttct ttggcatttc gccaagaagc cctgtgagaa aaatgctcta
      301 aattgccttt cattattccc atcattgata accgaccgga ttggtgttca tgagtttgcg
      361 cacgatggac atttgaatga aacaggttca cgtaaagtgg ctctggcaat tttcaattat
      421 atatcgacta aatttcctat gaataaatga aaaaaggtca gcaataggca ctgtcagagg
      481 aaacagtgcc tacaaggaaa ttggtaagaa tattccagca gaaagcttag gataaactta
      541 gtcgacttgg aggaaggtac gccggatagc aaacaaatat ttcatgcctt gcttgccgaa
      601 ccgttatttt tcgttcccta ttgatttaat aatttatttt gtaaataata gtttcaattg
      661 caactaaatt taattataat ctttttatta tgagaaatgg tgcacaaaca gaccctgaaa
      721 acttccggaa gacggctgga acgtgtttcg gtcggctatt ggaaaatatt ggatgttaca
      781 agtaggagag atgcagaatg acatattcga cagagggtga gcaacggttt gtaaactgca
      841 cacttgccgg gcctgtggaa gtttttgtac gggatggcaa aattgtacga gtattacctc
      901 tagagtataa ggaggatgac gcgccgccct ggaccatcga agcacgaggt aaaaccttca
      961 cccgacctgg caaagtaggt atttcttgct gggttcaggg ctccaagcaa atggtctatt
     1021 cgaaagagcg actgttatcg cccctcaaac gagtcgattt tgatcccgat ggcgagcgca
     1081 atccgcaaaa tcgcggcatt tccggctatg aggaaatcag ctgggacgag gccctcgata
     1141 tctttgccaa ggaaaccatc cgcatccgca aaaaatacgg gccgtctgct gttgccgtaa
     1201 ccggctcatc ccacgattca tggggtaata tcggctatcg tatgagcgcc ttggaccgtt
     1261 tttggaatat cctcggttgc acttggattg atcatagccc tgaaagctgg gaaggctttt
     1321 tctggggtgc gatccatgct tggggttttc attggcggct tggccaagct ccggcgtacg
     1381 atcttttgga agacactttc aaaaatactg aaatgattgt cttctggtct tctgatccaa
     1441 ctacgacgtc cggagactat gcttggaatg agaccgatgc ctggcgtttt catatgaaaa
     1501 agcttggtat caagttcgtc tttatcgatc cgttctgcaa ctacaccgcc gttttggatg
     1561 gtgataaatg gattaaacca aaacccggca ccgatacgac tttggcactg gcgattgccc
     1621 acacctggat gaccgaaggc acctacgata aggaatatgt cgagactcgt acccacggtt
     1681 tcgaaaaatg ggcggattac gtgctcggaa aagaggacgg tgtcgctaag acccctaagt
     1741 gggcagagga aatttccggc gttaaagccc gcgatattct ggcactggct cgtgagtggg
     1801 gagctaaaac aacaacactg gcaccgggtg gacgggcagg catgagtaat gccggccggg
     1861 ctgcttatgg ccatgaatac acccgcatga tggttttgct ttgcgccatg caagggctgg
     1921 gcaaaccggg cgtcaatgtc tactcgacaa ctggcggcgc accggcagac tgggacttct
     1981 acttccctgg ctatgccgat ggcggcatca gcggcggcag ttctggcgct attgaattgg
     2041 gaccacgcgg ttttccggac aaaggcacca gcagtcaaat ccgtcaacgg gtcgcacgtt
     2101 ctgtcttccc tgaagcggtg atgaacccgc cggtaacgtg gcgcggcgtc tatggttatt
     2161 acggccaaag cgcggaacag caattcaccg aatgcaagtt cccctttgac ggatattctg
     2221 aaatcaagat gctcttccgt cagggatcgt cctatatcgg cacgatgacc gattccaacc
     2281 gctgggtgaa tatgtaccgc catccgaata tggaattcgc ggtcaaccag acgatctaca
     2341 acgaaccaga agccaggatg gccgatctgg tattcccggt ttgtaccaat ttcgaacgct
     2401 gggatattgg cgaatgggca cggatttcag gatattcccg ccatctcagc ccgaccaatg
     2461 cccgcgtcat cgtgctgcag caaaaatgta ttgaaccttt gggcgagtct aaacccgatt
     2521 acgaaatctt tgccatgctg gccaaaaaac ttggtatcga ggaaaggttt accgaaggcc
     2581 gcactgattt tgagtgggcc aaacgtatgt atgagatttc tgatctgcct aaggtgacaa
     2641 actgggagga cttccgggaa aaaggctact acgtggtgcc ggtaccggaa gattatgtcg
     2701 gcaagccggc cttccgctgg ttcgccgaag ggcgacccaa ggacaccgac gattggggcc
     2761 caggtttgaa agacaatccg accctagatg gcaaaggtct ttcaacgccg acccagaaga
     2821 tcgaatttga agctcaaacc ttgaaacggt ttgatcccaa tgatgaggag cggcctttgg
     2881 taccaaaata catcccctcc tgggaaggca cggaaaccga ggatttgctt aagaaatatc
     2941 ctttgcagct gatcacacca catcctcgct ttacctttca ctcccaacat gatggcaagg
     3001 atttgtggaa tgaggaaatt cctcaccaac gacggcttaa agacggctac cgctataccg
     3061 tgatgcggat gcatcctgac gatgccgcag aacgggatct taaggatgga gatttggccc
     3121 gcgtctacaa tgaccgcggc acggctctct caatcatcac cataacgccg cgtatggtga
     3181 aaggtgtcat ccattcgtat ggttccggtg gcggctacga cccgcaaggt gatagtccag
     3241 gtgatgctga caacattgat cgcggcggaa ccatgaatct gcttacatcg tcgcgatgga
     3301 tatcgaagaa ttgtcctggt atggctccga atagctgtct ggcggaaata gagaaatggg
     3361 aaggagctga ataatggccc gttacggact cgtgattgat ttggattatt gcattggatg
     3421 ttataactgc caaatcgcct gtaaagacga acatgtcggc aatgagtttg cgccggtggc
     3481 taaaagtcag ccaacgtttg atcatttctg ggttggcatc gaagaggtcg agcggaacta
     3541 ttccgactcg cggatcgaag tcacctatat cccgacgctg tcacaaagta agaatttgct
     3601 ggacgtggct aaagatggag aagtctatga acgcccggac ggcatcgtca tcattgatcc
     3661 ggaaaaagca gccggcaaaa aagagttgtt ggatgcttgc ccgagtggac gggtttactg
     3721 gaatgaagaa gcaaatgttg cgcaaaaatg tactttttgc gctcacctgc tcgatagcgg
     3781 ctggacggaa ccgcgctgcg tgcagagttg cccaaccagt tgcatgatct ttggcgatcg
     3841 tgacgacccc aacagtgaaa tctccaaagc tttggccaat gggacggccc agccctacaa
     3901 tccgaacgaa acagacccgt cagtccacta tatcggcctg ccatcgccgg tcgtttcggg
     3961 cacagtcatc ctcggcgatt gcgatgaatg cgccgatggc gctgtcgtga cgttgctaga
     4021 taaaggggga gcgatagcca atcaatcgac ggattgcttc ggtgatttct tgttcaaaga
     4081 cctggatgtt ggcaaataca aggtaaaggt cgagaaagat ggatacgaat cgaatattgc
     4141 tgaaattgaa gtagaaagcg atgtgactca attaggagat atcattctcc attagggcac
     4201 tgtcagtcgg cattatccgt gtaggctgcc ggcaatggtc tctcagtact gctgtgtgaa
     4261 caatttgata gcgcaggtct taggtgctga tgttgctcat gcagaccctt catcacttgg
     4321 tacgtgtttt tatcgtcata attgggtcac aaatcgcatt tagtcgtata aaagacgatt
     4381 agatcacaag tccgctaatg ggatagatgt tcaaaatcat agggcaaaac atttaattga
     4441 aaaaccgatc aaggctatcg ataacttgat cacattcttc aatcgtaccg attgtgatgc
     4501 gcaaatagtc gtcgaggccg tagtcttcat tggtgcggac tataatgcct tcgcttacca
     4561 aatgtcggaa agcgtcgacg gcttttcggt tggtctgggt tgccggaaat ttaacgagta
     4621 caaaatttgc ggcacccggc accatggtaa caccgaaccg gctcaaatct ttgataaatt
     4681 tctttcgggc ctggtcagtt tcccggcgta ctttgtcgac atgact
//
LOCUS       DASCNL010000861         1142 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001774302, whole genome shotgun sequence.
ACCESSION   DASCNL010000861 DASCNL010000000
VERSION     DASCNL010000861.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1142)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1142)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001774302"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1071)
                     /locus_tag="QF359_11360"
     CDS             complement(<1..1071)
                     /locus_tag="QF359_11360"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87550.1"
                     /translation="MLHRRLNFFFLNIGHLYDHLFVLIFATVAALSLSKNWGLTYDEL
                     IPYATPGFVAFGVCALPAGWLADKWSRQGMMVVFFIGIGVSSIATSFAQTPLQIGLGL
                     LIIGMFAAIYHPVGLALVVEGHERTGVPLAINGIFGNLGVAAAALITGLLIDIIDWRA
                     AFYVPGVLSIGSGLAYGFFIRSNSNHEVPAQMKKTAGKTDIDAASAEDRKIIIRIFAI
                     MFISTAIGGVIYQSTTFALPKLFDERLIDIAETASEIGFYAFIVFAVAGIAQLVVGYF
                     ADRHSIRSVFGSVALLQICFLALVHNMSGLNSVLVAMIVMMAVFGQIPINDILIGRIS
                     SPEWRSRIFAFRYIITFSAMATT"
BASE COUNT          357 a          270 c          265 g          250 t
ORIGIN      
        1 cgtcgttgcc atcgccgaga atgtaataat gtacctaaaa gcgaaaatcc ggctgcgcca
       61 ttctggcgag gatatgcggc cgattaaaat atcattgatc ggaatttggc caaacaccgc
      121 catcataacg atcatcgcca ccaaaacaga atttagccct gacatattgt gaaccagggc
      181 caggaagcag atttgcagga gggcaacgga cccaaagacg gatcggatgg aatgccggtc
      241 agcaaaatag cccacgacca gttgggcgat accagcaacg gcgaaaacaa tgaaggcata
      301 aaaaccgatt tcggaagcgg tctccgcaat atcgatcaac ctctcgtcaa ataattttgg
      361 cagcgcaaat gtcgtgcttt gataaatcac accaccgatt gcagtcgaaa taaacataat
      421 ggcaaagatg cgaataatta ttttccggtc ctctgcggaa gccgcgtcga tatctgtttt
      481 tccggctgtc ttcttcattt gagcgggaac ttcatggttg gagtttgacc taataaagaa
      541 gccatatgct aatccagagc caatactcaa aactccagga acataaaaag ccgcccgcca
      601 gtcgattata tcaatcagca gacctgtgat aagtgctgct gctgctactc cgagattgcc
      661 aaaaataccg ttgatggcga gcggcacacc ggtgcgttcg tgtccttcaa caaccagcgc
      721 taaaccgaca ggatgataaa ttgcggcaaa cataccaata atgagcaacc ctaacccgat
      781 ttggagtggc gtctgcgcaa atgaagtcgc gatagaactt acaccgatgc caataaaaaa
      841 aaccaccatc atgccttgtc ggctccattt atctgcaagc cagccggctg ggagagcgca
      901 tacgccaaaa gctacaaatc cgggggtcgc gtagggtatc aattcgtcgt aagtgagccc
      961 ccaatttttc gatagcgaca gtgcggcgac ggtggcaaaa atcaatacaa ataggtgatc
     1021 gtagagatgg cctatattga ggaaaaaaaa attgagacgg cgatgcagca ttgataagta
     1081 attcccctag tttctctatt ctggtctaag aagggaaaga tttaaagtat ttaaacaaac
     1141 tg
//
LOCUS       DASCNL010000862         2094 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001774346, whole genome shotgun sequence.
ACCESSION   DASCNL010000862 DASCNL010000000
VERSION     DASCNL010000862.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001774346"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(78..1334)
                     /gene="rho"
                     /locus_tag="QF359_11365"
     CDS             complement(78..1334)
                     /gene="rho"
                     /locus_tag="QF359_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HJO87551.1"
                     /translation="MNLQELKEKSPTDLLQFAEELEIENASTLRKQDILFAILKQMAE
                     NDTAIFGTGVLEVLQDGFGFLRSPESNYLPGPDDIYVSPSQVRRFGLRTGDTVEGQIR
                     APKDGERYFALLKVTNINFGDPQDVRHRINFDNLTPLYPDEKLLMEMDDPTHKDPTSR
                     VLDLITPVGKGQRALIVAPPRTGKTVMLQNIASSVAANHPECYLIVLLIDERPEEVTD
                     MARSVNGEVVSSTFDEPASRHVQVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNT
                     VVPSSGKVLTGGVDANALQRPKRFFGAARNVEEGGSLTIIATALIDTGSRMDEVIFEE
                     FKGTGNSEIILDRKLTDKRTWPAMDITRSGTRKEELLVDKDMLSKMWVLRRILNPMGV
                     VDSMEFLIEKLKDSKNNDDFFDSMNT"
     gene            complement(1579..2031)
                     /gene="hemJ"
                     /locus_tag="QF359_11370"
     CDS             complement(1579..2031)
                     /gene="hemJ"
                     /locus_tag="QF359_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018308029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HJO87552.1"
                     /translation="MMIEFSSDAYLWIKALHIISVMAWMAGMLYLPRLFVYHCEAETG
                     SELSEKLKIMERRLLYAIITPAMIASLLFGSLLFLNLDPEIWLNGWVIAKGVFSIWLF
                     VMYDMMRKWRNDFEADANTKSQKFYRMMNEVPTVLMIGIVIFVVVKPF"
BASE COUNT          558 a          503 c          475 g          558 t
ORIGIN      
        1 ggctcatacg gcgcttgaat cccgtcagac catgggctcg acagtgctga taccttaaag
       61 agtttagaac tcggtcgtca cgtattcatc gagtcgaaga aatcgtcatt gtttttcgag
      121 tctttcaact tctcaattaa aaattccata gaatcgacga cgcccatcgg attaagaata
      181 cggcgcagta cccacatctt ggagagcata tctttgtcga ccagcagctc ttctttacgg
      241 gtgccggagc gggtgatatc catcgccggc caagtccgtt tatcggtcag tttgcgatca
      301 agaataattt cggaattacc ggtgccttta aattcttcaa agataacttc atccatccgc
      361 gagccagtat caatcaatgc ggtggcaata atagtcaggg agccgccttc ttcaacatta
      421 cgcgccgcgc caaaaaaacg tttcgggcgt tgcagcgcat tggcatcgac tccaccggtc
      481 agcactttac cggatgacgg cacaactgtg ttataagcgc gcgccaatcg ggtgatagaa
      541 tcgagcagaa tcacgacatc tcgtttatgt tcaaccagac gtttggcttt ttcgatcacc
      601 atctcggcaa cttggacgtg acgcgaggcc ggctcatcaa aggtcgagct gaccacttcg
      661 ccgttcaccg atcgcgccat atcggtcacc tcttccgggc gttcgtcgat taatagcaca
      721 atcaaatagc attccggatg attggccgcg acggaggagg cgatgttttg cagcatcacg
      781 gttttaccag tgcgtggcgg cgctacgatt agggcgcgct ggccttttcc aaccggtgtg
      841 atcagatcca atacccggga cgtcggatct ttatgggtcg gatcatccat ctccatcagc
      901 aatttttcgt ccggataaag cggcgtcaag ttatcaaagt tgatacgatg gcgaacatct
      961 tgagggtcac caaaattaat attggtgact ttcaacaggg caaaatagcg ctcaccatct
     1021 ttgggtgccc taatttggcc ttcaactgta tctccggtcc taagaccaaa acggcgcacc
     1081 tggctgggtg agacgtagat atcgtccggg cccggcaaat aattcgattc cggtgagcgc
     1141 aggaagccaa agccgtcctg caatacttcg aggacgccgg tgccgaaaat ggccgtatcg
     1201 ttctctgcca tttgtttgag tatggcaaac aatatatcct gcttacgcag tgtactggcg
     1261 ttttcaatct cgagttcttc ggcaaattgc agaaggtcgg taggtgattt ttctttaagt
     1321 tcttggaggt tcattgttat ttacactttg aaagttaatg cctgaaaagg cattttatgg
     1381 ttggttgggt tatttatccg aaaattcgga aatctaaata tattacgaga tgtgattctg
     1441 gcgacagcct gaatacgttt tgaaattttt tgaaaatcga attcttaccc ggtgaattaa
     1501 aatgaaaatt ttgggcgaga aatcgctttg gctgaccaaa cacatagcag aatagtcagg
     1561 attaagtcaa atgatgtttt aaaacggctt caccacaaca aaaattacga taccaatcat
     1621 cagtaccgtc ggcacttcat tcatcatccg gtaaaatttc tgcgatttgg tattggcatc
     1681 ggcttcaaaa tcgttgcgcc attttctcat catgtcatac ataacaaaaa gccaaatact
     1741 gaaaactcct ttggcgatta cccagccatt caaccaaatc tccgggtcca aatttaaaaa
     1801 taacaagctg ccaaatagca gtgaagcgat cattgcgggc gttatgattg cgtagagcag
     1861 acggcgctcc ataattttaa gtttttctga caattctgag cctgtttcgg cttcgcaatg
     1921 gtatacaaaa agccgtggca aatagagcat acccgccatc caggccatta cactaatgat
     1981 atgcagggcc ttgatccaca aataagcatc gctagagaat tcaatcatca ttaaagcgcc
     2041 tttctgccta ttatttcgga cagcacagcc gatcagcggg acaccatcgc tccg
//
LOCUS       DASCNL010000863         1321 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001780422, whole genome shotgun sequence.
ACCESSION   DASCNL010000863 DASCNL010000000
VERSION     DASCNL010000863.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1321)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1321)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001780422"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="QF359_11375"
     CDS             complement(<1..360)
                     /locus_tag="QF359_11375"
                     /inference="COORDINATES: protein motif:HMM:NF014704.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HJO87553.1"
                     /translation="MNILDISVVVVLFLGAIIGLALGFVRSGLFILSWLGSAVVTIFT
                     FPHLRPYARQYIEHDFFADLATGVAVFIATLIVLFLVSSVVGGWVKNSRLNALDRSLG
                     MLAGIATAALLISGGYII"
     gene            complement(388..>1321)
                     /locus_tag="QF359_11380"
     CDS             complement(388..>1321)
                     /locus_tag="QF359_11380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
                     /protein_id="HJO87554.1"
                     /translation="PTVVVADSVQTLYVDNLDSAPGTVTQVRSSAQELIRLAKRRGFV
                     LFLVGHVTKDGNIAGPKILEHMVDCVLYFEGERGHQFRILRAVKNRFGPADEIGVFEM
                     TDAGLAEVPNPSAIFLADREEGVSGASVFAGIEGSRPMLMEIQALTAPTSFGTPRRAV
                     VGWDANRLSMILAVLEARCGLSIGGHDVYLNVAGGLRISEPAADLAVAAALVSSVTRV
                     PVPAEVVVFGEIGLSGEVRPISQSEARLKEASKLGFSGAVAPENHRRKGTQNVKITKS
                     KLTEVRIRHLDQLLEYLRQEGEKNPPVDLMASQG"
BASE COUNT          358 a          371 c          317 g          275 t
ORIGIN      
        1 gatgatatag ccaccggaaa taagcagagc agccgtggca atcccggcca acattccaag
       61 cgagcgatca agtgcattta agcggctatt tttaacccag ccaccaacca cggagctgac
      121 cagaaacaat acgataaggg tggcgatgaa aacggcgaca ccggtggcaa gatcggcaaa
      181 gaaatcatgc tcaatatatt ggcgtgcgta gggccgaaga tggggaaagg taaaaatcgt
      241 caccacggct gaacccagcc acgacaagat aaaaagaccg ctccgcacaa agccgagcgc
      301 caagccgatt atcgcgccca ggaagaggac gacaacaacg ctgatatcga ggatattcat
      361 cgggaggttt tccatcggat gtaatcttta tccttggctc gccattagat caaccggtgg
      421 atttttctca ccttcttggc gcaaatattc aagcaattga tccaaatgtc taattcttac
      481 ctcagtcaat ttcgacttgg taatttttac attttgtgtg cctttccggc gatgattttc
      541 gggtgccaca gcaccgctaa agcctaactt tgacgcctct ttgaggcggg cttcactttg
      601 gctaattggg cggacctcac cggataagcc gatctcccca aaaaccacca cttcagccgg
      661 cactggcacc ctcgtaactg acgacaccaa cgccgccgct acggccaaat ctgctgccgg
      721 ctcactgatg cgcaagccgc ccgctacatt tagatagaca tcatgaccgc caattgaaag
      781 accgcatctt gcttccagca cagctaagat catcgacagc cggttggcat cccagccgac
      841 aacggcccgg cgcggcgtac caaaggaagt tggcgctgtt aaagcttgga tttccatcaa
      901 cattgggcgg ctgccctcga taccggcaaa aacactggcg ccgctgacgc cttcttcgcg
      961 gtcagccaaa aaaattgctg aggggttggg cacctcggcc aaaccggcat cagtcatctc
     1021 aaatacgcca atttcatcgg cgggaccaaa tcgattttta actgcacgca aaatgcggaa
     1081 ctggtgaccg cgctcacctt caaaataaag cacgcaatca accatgtgct ctagtatttt
     1141 gggcccggca atattgccat ctttggtgac atggccgact aaaaacaata caaagccccg
     1201 gcgtttggcg agccggatca gttcctgagc cgaactcctg acttgagtaa ccgtaccggg
     1261 ggctgaatcc agattgtcga cataaagagt ttgcaccgaa tcggcaacga caactgtcgg
     1321 a
//
LOCUS       DASCNL010000864         1018 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001783746, whole genome shotgun sequence.
ACCESSION   DASCNL010000864 DASCNL010000000
VERSION     DASCNL010000864.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001783746"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..973
                     /locus_tag="QF359_11385"
     CDS             <1..973
                     /locus_tag="QF359_11385"
                     /inference="COORDINATES: protein motif:HMM:NF014717.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HJO87555.1"
                     /translation="FIDIQPGQTTRFDQTVTGVPGTGDYKRVASLRGRIVKIAGVPVE
                     QVDISPGVEWAVRGDRALTYAATPAEGTEIVAGKWWPENYSGPPLISIDANLARGFGI
                     GLGDNLTLNILGREIKAKVTSLRKIDWRSIRFDFAIIFAPGTLEAAPHSHIAAIQAPK
                     ELEDRIEKEVSDRFNNISIIRVREALQAAATMLDGIGAAVRSTAAVTILGGTLVLAGA
                     VVAGRRQRIYDAVVFKVLGATRRTILKAFLLEYGLLSVVTSIISAIIGSLTAWAIVVF
                     LMDMSWVFIPAAVWTTIAICLIVTLIIGFAGTWWALGQKAAPLLRNE"
BASE COUNT          220 a          264 c          283 g          251 t
ORIGIN      
        1 cttcatcgat attcagccgg gccagaccac ccgctttgat cagaccgtca ccggtgttcc
       61 cggtaccggc gattataaac gcgtcgcctc gctcagaggc cgcatcgtca aaattgccgg
      121 ggtgccggtt gagcaggtcg atatttcacc cggcgtcgaa tgggcggtgc gcggtgatcg
      181 cgccctgact tacgctgcta cacctgccga gggcactgaa attgtcgccg gcaagtggtg
      241 gccggaaaac tacagcggtc caccgctaat atctatagat gccaatctcg cccgaggctt
      301 tggtatcggg ctcggtgata atttgacgct caacatattg ggtcgggaaa ttaaggccaa
      361 ggtcacttct ttgcgaaaaa ttgattggcg gtctatccgc tttgatttcg ccattatatt
      421 tgcgccgggc actttggaag ctgcgcccca tagccatatc gctgccatcc aggcgccaaa
      481 agagcttgaa gacagaattg agaaagaggt tagcgaccgg tttaataaca tctcgatcat
      541 tcgggtgcgc gaagctttac aagcagcggc cacaatgctg gatggcattg gggcggcggt
      601 cagatcaaca gcggcggtaa cgatcctggg cggcacgctg gtgctggcgg gcgccgttgt
      661 agccggccgg cggcagcgca tttatgatgc ggtggtgttt aaagttttgg gtgcgacccg
      721 gcgcacgatc ttaaaagctt ttctgttgga atatggcctg ttgagtgttg tgacctccat
      781 catctcagcg attatcggct cccttaccgc ttgggctatc gtcgtatttc taatggatat
      841 gagctgggtt ttcatcccag cagccgtctg gaccaccata gccatctgcc taattgtgac
      901 gctgattatc ggctttgccg gaacatggtg ggccttaggc caaaaagccg cccctctcct
      961 gcgcaatgaa tgagaaatat ctcttaaata taaaggatta accttttcaa atttaacg
//
LOCUS       DASCNL010000865         2315 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001787360, whole genome shotgun sequence.
ACCESSION   DASCNL010000865 DASCNL010000000
VERSION     DASCNL010000865.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001787360"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            77..>2315
                     /locus_tag="QF359_11390"
     CDS             77..>2315
                     /locus_tag="QF359_11390"
                     /inference="COORDINATES: protein motif:HMM:NF016724.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HJO87556.1"
                     /translation="MLIGGVPEGYEGVVLSQLIEAENDVLFVARDDRRMAAVQASLRF
                     FASTIEVIEFPAWDCLPYDRVSPKSDIVAARIDALTNLVDTKGKQPRIILTTVAALLQ
                     RVPARQTFEGSNMTCGKGEETSRDRLLEFLKQNGYGRSETVMEPGEYAIRGGIIDLFP
                     PGVEEPLRLDFFGNDLDGIRRFEPFSQRTTGEADSFILKPVNEISMDEEAISRFRTAY
                     RALFGAIPSEDPLYEAISEGHTQAGMEHWLPLFHDELETLLDYLPEAFIAFDHQADEA
                     SDARWELIGECYDARANMKARGLAVSETTYNPLPVDRLYLTAKDFQSTLNGRKQLKFQ
                     PFSVPESEGISTDAGGKLGRDFADARALPDVNVYDALREHIQAEIKAGRTIIIGAFSE
                     GSAERLLGILLEHEIRAATDSKSPVRLAVLELEHGFTAPRLALITEQDILGDRLSSPQ
                     RRKIRPENFIAETSVLNTGDLVVHAEHGIGRYEELVTLDVTGAGAPHDYLRLIYDGGD
                     KLFLPVENIEVISRYGEDSETIRLDKLGSVAWQARKSQLKQRIRDMADQLIAVAAARE
                     LKKGEVFEPQSGIYDEFCSSFQYTETDDQDRAIGDVIKDLSSGRPMDRLICGDVGFGK
                     TEVALRAAFVTALEGKQVAIVVPTTLLARQHQHIFEERFADFPVQVRQLSRLVSKKDA
                     DVTKAGLESGQVDIVIGTHALLAKSIKFDRLGLLIIDEEQHFGVAHKEQLKSMKNNVH
                     VLTLTA"
BASE COUNT          571 a          551 c          628 g          565 t
ORIGIN      
        1 ggagttaata attaaattta aagaaagcct gtaactcatt attaaatata aaaaaatact
       61 ggatgataat actgaaatgc tgattggtgg tgtcccggaa ggttatgagg gtgtggtact
      121 aagccaattg attgaggcag aaaatgacgt gctttttgtc gcccgggatg atcgccggat
      181 ggcggcggtg caagctagtc tgagattttt tgccagcacc atcgaagtga tcgagtttcc
      241 agcctgggat tgtttgccgt atgaccgggt atctccaaaa agtgatattg ttgctgcccg
      301 tatcgatgcg ctaaccaatc tggtcgatac taagggcaaa cagccccgta tcattttgac
      361 cacggtggcg gctttgttgc aaagagttcc ggcacgccaa accttcgaag gctctaatat
      421 gacgtgcggc aaaggcgaag aaacttcacg cgatcgcctg cttgaattct tgaaacaaaa
      481 cggttatggc cgcagtgaaa cagtgatgga gcccggcgaa tatgccattc ggggcggtat
      541 tattgatctc tttccccccg gtgttgaaga accattgcgg ctcgactttt ttggtaatga
      601 tctcgatgga atccgccggt ttgagccatt tagtcagcgc accaccggtg aagccgacag
      661 ctttattctc aagccagtta atgaaatatc catggatgaa gaggcgatca gccggttccg
      721 cacggcttac cgagcattat ttggcgcgat tccaagtgaa gacccactct atgaagcgat
      781 ttctgagggc catactcaag cggggatgga acattggctg ccgctgttcc atgacgagct
      841 ggaaaccttg ctcgactacc tgccggaagc atttatcgcc tttgatcatc aggccgatga
      901 agccagcgat gcccgttggg aattgattgg tgagtgttat gatgcacgtg ccaatatgaa
      961 agcgcggggg ctggcggttt cggaaaccac atacaatccg ctgccagtag atcggctata
     1021 tcttaccgct aaagattttc aatcaacgct aaacggccgg aaacagctta aatttcagcc
     1081 attttccgtg cctgaatcgg aaggtatcag caccgatgcc ggcggtaagc tcggccgtga
     1141 ttttgccgat gcccgcgctt tacccgacgt caatgtctat gatgcgctgc gcgaacatat
     1201 tcaagccgag ataaaagccg gtcgcaccat catcattggt gctttttcgg aaggttccgc
     1261 cgagcggttg ctaggtattt tactagagca tgaaatccga gctgcgaccg actcaaaatc
     1321 gccggtccgt ttagctgttt tagaactgga gcacggtttt accgcaccta ggctggcgct
     1381 cattaccgag caggatattc tcggcgaccg gctgagctcg ccccaacgcc gcaaaattcg
     1441 cccggaaaac tttatcgccg aaacctccgt cctcaacacc ggtgatttgg ttgttcatgc
     1501 ggagcacggt attggccgct atgaagaact ggtaacgctg gatgtgactg gggctggcgc
     1561 accacacgac tacttgcggt taatctatga cgggggcgat aagctattcc tgccggtcga
     1621 aaatattgaa gtgatctcgc gttatggtga agacagcgag acgatccgct tggacaagct
     1681 cggcagcgtt gcctggcagg cgcggaaatc ccaattgaag cagcgtattc gcgatatggc
     1741 ggatcaactc attgccgttg ccgctgcacg tgagctcaaa aagggtgagg tctttgagcc
     1801 ccaatccggt atctacgacg agttctgctc gagttttcaa tacaccgaga ccgatgatca
     1861 agatcgtgcc attggcgacg ttatcaaaga cctttcgagt ggccgtccga tggaccgttt
     1921 gatttgtgga gatgtcggct ttggtaaaac cgaagtggct ttgcgggctg cctttgtcac
     1981 tgccttggaa ggtaagcagg tggcgattgt tgtaccgacg acactattgg cgcgacagca
     2041 ccaacatata tttgaagaac gtttcgccga tttcccggtg caggtgcggc aattaagccg
     2101 tctagtgtcg aaaaaagatg ccgatgtcac caaagcggga cttgaaagtg ggcaggttga
     2161 tatcgtcatc ggcactcatg cgctgctggc caaaagcatc aagtttgacc ggttagggct
     2221 cctgattatc gatgaagaac agcatttcgg cgtggctcat aaagaacagc taaaatcgat
     2281 gaaaaacaat gtgcatgtgc tgaccctgac ggcaa
//
LOCUS       DASCNL010000866         1153 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001787622, whole genome shotgun sequence.
ACCESSION   DASCNL010000866 DASCNL010000000
VERSION     DASCNL010000866.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1153)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1153)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001787622"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1153)
                     /locus_tag="QF359_11395"
     CDS             complement(<1..>1153)
                     /locus_tag="QF359_11395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007397046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO87557.1"
                     /translation="VDLIMDDDGSCRGVVAWNLADGTIHRFLAHQTVLATGGYGRTYF
                     SCTSAHTCTGDGNGMVLRAGLPNQDMEFVQFHPTGIYGSGCLITEGSRGEGGYLTNSE
                     GDAFMERYAPSAKDLASRDVVSRSMTIEIRENRGVGEEKDHIFLHLEHLGAEVLHRQL
                     PGITETAKIFAGVDATKEPIPVLPTVHYNMGGIPTNYHGEALRPTTDDSEAICPGLMA
                     IGEAACVSVHGANRLGTNSLLDIVVFGRAAAIRAAETVDQNKSVKPADANTGEAAIAR
                     LDRLRYASGSQSTAELRASMQRVMQNNAAVFRTSDVLKEGCSLIDQVADNLKVLKVSD
                     QSLIWNSDLVETLELENLMACSKATIYGAEARHESRGAHAHEDFPDRDDE"
BASE COUNT          275 a          330 c          287 g          261 t
ORIGIN      
        1 tttcgtcatc acgatccgga aaatcctcat gggcatgagc gccgcgggat tcgtgccggg
       61 cctcggctcc ataaatggtc gctttcgaac acgccatcag gttttcgagc tccagcgttt
      121 ccaccaaatc cgaattccag atcagagatt gatcgctgac tttcagaact ttgagattgt
      181 cagctacctg gtctatcaaa ctgcaacctt ctttcagaac atcagaagtt ctaaatacgg
      241 cagcattatt ttgcatgacg cgctgcatgc tggcgcgcag ctcggccgtg ctttgactgc
      301 cactggcgta ccgcagacga tcaagccggg caatcgctgc ttcaccggta ttagcatccg
      361 ccggtttgac ggatttgttt tgatcaacgg tctcggcagc gcgaatagca gcagcgcgcc
      421 caaagacaac aatatccaac agtgaattgg tgccaaggcg gttggcgcca tgaaccgaaa
      481 cacaggccgc ttcaccaatc gccatcaggc ctgggcaaat cgcctctgaa tcatcggtcg
      541 ttgggcgcaa cgcttcaccg tgataattgg ttggaatacc gcccatatta taatgcaccg
      601 taggcaatac cgggatcggc tccttggttg catcaacacc agcgaatatt tttgcggttt
      661 cggtgatgcc cggcaattgc cggtgcagaa cttcagcgcc gagatgttcg agatgcaaga
      721 atatgtgatc cttttcttcg ccgacgccgc ggttttctct aatctcaatc gtcattgaac
      781 ggctaaccac gtcacgtgac gccaaatctt tggcactcgg tgcatagcgc tccataaagg
      841 catcaccttc cgagttggta agatagccgc cctcgccccg ggaaccttcg gttatcaaac
      901 aacccgaacc ataaataccg gttggatgaa actggacaaa ttccatgtct tgatttggta
      961 ggccggccct aagcaccata ccattaccat caccggtgca ggtatgcgca gacgtgcagg
     1021 aaaaataggt ccggccatag ccgccggtcg ccagtaccgt ctgatgagcg aggaagcgat
     1081 ggatggtgcc atcagccaag ttccaggcca ccacgccgcg gcacgagccg tcatcatcca
     1141 taatcagatc gac
//
LOCUS       DASCNL010000867         6245 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001789822, whole genome shotgun sequence.
ACCESSION   DASCNL010000867 DASCNL010000000
VERSION     DASCNL010000867.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6245)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6245)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6245
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001789822"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="QF359_11400"
     CDS             complement(<1..311)
                     /locus_tag="QF359_11400"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HJO87558.1"
                     /translation="MYDFEYQRATSTDDATSKYSAAEDARFLAGGMTLIPVLKQRLDQ
                     PSDVIDLGYLDDMRGISEEGSAIMVKAMTTHHDVNSSDLINSKIPALAALAGTIGDQM
                     VR"
     gene            complement(327..794)
                     /locus_tag="QF359_11405"
     CDS             complement(327..794)
                     /locus_tag="QF359_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO87559.1"
                     /translation="MPSIKMTVNGKEVSGEVEGRTLLVQFIRDHLGLTGTHVGCDTSQ
                     CGACTVHMNGRVVKSCSILAAHADGAEILTIEGLADGDTLHPMQEAFRQHHALQCGFC
                     TPGMVMSAIGIVNDNPEPSEKEIREALEGNICRCTGYHNIVEAIDAAAKEMKA"
     gene            1235..1501
                     /locus_tag="QF359_11410"
     CDS             1235..1501
                     /locus_tag="QF359_11410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87560.1"
                     /translation="MSTVYGSALATTQLNIYQRFVGRTPAYRVALKRDLHAEIYLDEM
                     RDDFTKVHDTSEVKQVVKPKVVCSHNGQFVAVKAWNPRVLGGKK"
     gene            complement(1505..3202)
                     /locus_tag="QF359_11415"
     CDS             complement(1505..3202)
                     /locus_tag="QF359_11415"
                     /inference="COORDINATES: protein motif:HMM:NF009310.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit D"
                     /protein_id="HJO87561.1"
                     /translation="MINSLPPGLILLIGAFLVPFLPGRVRSLFMLALPLLGIWQLTQL
                     GHGDYGAMSLFGFQLVHFNVDKLSLVFGYIFYIAAFIGIVYALHKDDRLEETAALAYV
                     GAAIGATFAGDFITLFVYWELTAITSVFIVWAGRSPRAYKAGQRYLIIQVTSGVLLAA
                     GAIVRANETGSITFENIGLDSPGGLLILLAFGIKAAFPLLHNWLQDSYPEASETGTVF
                     LSAFTTKLAVYALARGFAGTEELIWIGVTMTAFPIFYAVIENDLRRVLVYSLNNQVGF
                     MVAGVGIGTELALNGAAAHAFAHILYKALLLMSVGAVLLRTGTAKGSELGGLYKTMPW
                     TLGFCVVGSASISAFPLFSGFVTKTMILAAAAEQGLVIPYLILLFASAGVFHHSGIKI
                     PFFTFFAHDSGKRPAEAPLNMLIAMGLAAALCIGIGVYPAPLYALLPFPVEYDPYTLS
                     HVVTDLQLLLFSALAFAVLQRTGLYPPELRSTVLDFDWFYRRAAVSVCRTITQWLSEG
                     LAGIYSDFSSVIKNIITTAFRLHGPDGIMARTNAVGGSVAIIIVLLTLFMLVFYLQV"
     gene            complement(3192..3491)
                     /locus_tag="QF359_11420"
     CDS             complement(3192..3491)
                     /locus_tag="QF359_11420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87562.1"
                     /translation="MNDISTENQNTSEHGAVPEDEKTFWLDDMRNVHKIFWALVVICC
                     LLMVSDLFIHKHTDFGFQGLFGFFGLFGFCLSFLLVLTSKQLRKIVMRDEDYYDK"
     gene            complement(3504..4985)
                     /locus_tag="QF359_11425"
     CDS             complement(3504..4985)
                     /locus_tag="QF359_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter subunit D family
                     protein"
                     /protein_id="HJO87563.1"
                     /translation="MIAENYILWAIAVPLVGSLVILLTGKMPNLRESVTLVTAVTMFL
                     VVGSLTHVVTRGGRPSVSLLEVFPGIELKFTVEPLGMLFALIASGLWIVTSLYSIGYM
                     RGNNEANQTRFYFFFAIALACAVGIAFAGNLFTLFLFYEALTLSTFPLVTHAGTETAK
                     RGGRTYLGILLSTSIGFLLLAVIWTWSLTGTLDFKPGGILAGKAEGPMVGILLFLFMF
                     GTGKAALMPFHRWLPAAMVAPTPVSALLHAVAVVKAGVFTVLKIIVYIFGIDFLAASG
                     SNVWLMWVATITLLFASIIAMYKDNLKARLAYSTVSQLSYIVLGAALATGASVIGGGL
                     HIAMHAFGKITLFFCAGAIYTAAHKTLVSELDGIGRKMPITMGAFLIGSLSIIGLPPM
                     AGAWSKFHLMLGAAEAGQLIFIGVWALSSLLSAAYLMPVIARAFFQPLPKSAGAAATD
                     EGIQEAPVFSLVAMAITATGTFVLFFFAGDIANMLAPIAADGK"
     gene            complement(4982..>6245)
                     /locus_tag="QF359_11430"
     CDS             complement(4982..>6245)
                     /locus_tag="QF359_11430"
                     /inference="COORDINATES: protein motif:HMM:NF012581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter subunit D family
                     protein"
                     /protein_id="HJO87564.1"
                     /translation="YKVDMLSAFVMLIVTSIGSISMIFAPNSVNSEIPDDRIYLFYTM
                     YLLTFSGLLGITITGDAFNLFVFLEISSLSSYVLISLGAERNALTAAFRYLILGTVGA
                     TFYIIGVGLMYQMTGTLNMVDLAQRLPAVAETRTILVALGFATVGIGLKLGLFPVHVW
                     LPNAYAYAPSVVTAFLAATATKVAVYTLLRIYFTVFGTKIFTALPIGEFLLLLSLIAI
                     LSMSAVAIFQKNAKRLLAYSSVAQVGYMVIGISMVTATGLTATILHLFNHAMIKGALF
                     LVLAAVFFRIKSVKIEHMAGLGKVMPYSMAAFVLAGFSLVGVPLTVGFVSKWYLILGA
                     LEKGWWPVAGLILISSLLAVIYFWKIVEVVYFKPRPQDAPLIHEAPLAMLIPMWVLVG
                     ANFYFGLDTDITVGSAKAAATLLIRGAP"
BASE COUNT         1766 a         1543 c         1604 g         1332 t
ORIGIN      
        1 cgtaccattt gatcaccgat cgtgccggcg agggctgcaa gggctggaat tttgctattt
       61 atcaaatcag acgaatttac atcgtgatga gtggtcattg ctttaaccat aatagcacta
      121 ccttcctctg atattccgcg catgtcatct agatagccaa gatcaatcac atcagaaggt
      181 tgatcgaggc gttgcttgag caccggtatg agtgtcatcc caccggctag aaagcgggca
      241 tcttcggcgg cgctgtattt ggatgtggca tcatcggtag aggtcgcacg ctggtattca
      301 aaatcataca ttttacgtcc ttttccctaa gctttcatct ctttggcggc agcgtcaatt
      361 gcttcaacaa tattatgata accggtgcaa cggcagatat taccttcgag agcctcgcgg
      421 atttctttct cgctgggctc aggattatcg ttaacaatac caatcgcact catcaccata
      481 ccgggtgtgc agaaaccaca ttgcagggcg tgatgctggc ggaaggcttc ctgcatcgga
      541 tgaagcgtat caccatcggc taaaccttct atggtcagta tttcagcacc atcggcgtgg
      601 gctgctaaaa ttgagcagga tttaacaacg cgcccgttca tatgaaccgt acaagcgccg
      661 cattgtgatg tatcacagcc gacatgagta ccggtcaatc ccagatgatc ccggatgaac
      721 tgaacgagca atgtacgtcc ttcaacctcg cctgaaactt ccttcccatt taccgtcatc
      781 ttaattgatg gcatgtttta tccccactgt attaaagtct tgttatagga atatcacttg
      841 aatccgccac cctcaatgcc tgcatgaaat ttaatcatca aatattattt tcttgaacct
      901 tttttaacag ccgacctaaa atataagacg aatagccata attaattggg acggagttat
      961 aaatgccggc agccgtcgat tcagtctttg atcttgcatt ttggatttca gaccgagcgc
     1021 ttaatgacaa tgggtatatg caggcggtaa agctgtaata tttgctgtat ttatcccagt
     1081 cttattatgc ggtcacctaa aacggaaaaa aatggtgctg acaattttgt cgcctaagaa
     1141 atcagcctta tcgagccagc ggttcatcgc gcctgggtaa gaggtcgtcc gaacttcgaa
     1201 gacgattaca atttaagtga agaagtgcaa acttttgtcg acagtgtatg gtagtgcttt
     1261 ggccaccact cagctgaaca tttatcaaag atttgtcggc cgcacgccag cctaccgggt
     1321 agcgctcaaa cgagacctcc atgctgaaat ctatcttgat gaaatgcgcg atgatttcac
     1381 taaggtgcat gatacgtctg aagtaaaaca ggttgttaag cccaaagtcg tgtgctctca
     1441 caatggccag ttcgtggccg ttaaagcctg gaacccccgc gtgctcggcg gtaaaaagta
     1501 aagtttaaac ctgcaaataa aaaaccaaca taaagagcgt cagcaaaacg ataataatgg
     1561 ctactgaacc gccgacggca ttggtgcgtg ccattatgcc atccggccca tgcaaccgga
     1621 aggcggtcgt aataatgttt ttaatgacac tggaaaaatc actgtagata ccggccaacc
     1681 cctcgctgag ccattgcgtg atagtgcggc agaccgagac cgctgcccgg cggtaaaacc
     1741 agtcaaaatc caaaaccgtc gaacgtagtt caggcggata tagtccggtt cgctgcagta
     1801 cggcaaaggc caacgccgag aacagcagta gctgcaaatc cgttaccaca tgggaaagcg
     1861 tataagggtc atattccacg gggaacggta gcaatgcata gagaggcgcc ggataaacac
     1921 cgatgccgat gcatagcgca gccgcaaggc ccatggcgat cagcatattt agcggtgctt
     1981 ccgccgggcg cttacctgaa tcatgtgcaa agaaggtgaa gaatggtatc ttgatgccgg
     2041 aatggtgaaa cacgccggcc gaggcaaaaa gtaaaattag gtaagggatc accagcccct
     2101 gttccgctgc tgctgccagt atcatagttt tggtgacaaa gccgctaaac agagggaaag
     2161 cggaaatcga ggctgagccg acgacacaga atcccagtgt ccagggcata gttttataga
     2221 ggccgccgag ctccgaacct ttcgccgtgc cggttcttag taatacggcc cccaccgaca
     2281 taagcagcag ggctttataa aggatatggg caaaggcatg ggccgctgcg ccatttaagg
     2341 ctagttcggt gccgatgccg acaccggcga ccatgaaacc gacctgatta ttaaggctgt
     2401 agacgagcac tcggcgaagg tcattttcaa tcaccgcgta gaaaattggg aaggcagtca
     2461 tggtgacgcc gatccaaatc aactcctcag taccggcaaa gccgcgggcc agggcataaa
     2521 cagccagctt ggttgtaaag gcggagagga acaccgtgcc ggtttcggag gcttcgggat
     2581 atgagtcttg cagccagtta tgaagcagag gaaaggccgc cttgataccg aaagccaata
     2641 atatcaacag gccgccggga ctatccaggc caatgttttc aaaggtaatt gagccagttt
     2701 cgttggcacg gacgatggcg ccggctgcca gcaatacgcc ggatgttacc tgaataatca
     2761 gataacgctg accagctttg taggcgcggg ggctgcggcc ggcccagacg ataaaaaccg
     2821 acgtaattgc cgtaagctcc caataaacaa acaaagtaat aaagtcaccg gcgaaagttg
     2881 cgccaatggc tgctccgaca taggccagag cggctgtttc ctcgaggcgg tcatctttat
     2941 gcagagcgta gacaattccg atgaaggcgg cgatgtaaaa aatatagccg aaaaccagcg
     3001 acagcttgtc gacattaaag tgtaccaatt gaaaaccaaa cagcgacatg gcgccgtaat
     3061 caccatgtcc cagttgggtc agctgccaaa ttcctaacaa cggcaatgcc agcataaaca
     3121 ggctgcgcac acggccgggc aggaaaggca caagaaaagc acctatcagc aggattagtc
     3181 cgggcggcag gctatttatc ataatagtcc tcatcccgca tgacgatttt acgcaattgt
     3241 ttggatgtca gcaccagtag gaaagatagg caaaatccaa aaagcccaaa aaagccgaac
     3301 aagccttgaa agccaaaatc cgtgtgttta tgaataaaca gatcggacac catcaacaga
     3361 cagcatatca cgaccaaagc ccaaaaaatt ttatgcacgt tgcgcatgtc gtcgagccaa
     3421 aaggttttct catcctccgg cacggcgcca tgttcggaag tattctgatt ttctgtcgat
     3481 atatcattca tcgatcttcc tctctatttt ccatccgcgg cgattggcgc cagcatattg
     3541 gcgatgtcgc cggcaaagaa aaacagtaca aatgtgccgg tcgcggtaat ggccatcgcg
     3601 accagtgaaa ataccggggc ttcctgaatg ccttcatcgg tcgcggcagc gccagctgat
     3661 ttcggcaggg gctgaaaaaa ggcgcgggcg atcaccggca tcagataggc ggcgcttaaa
     3721 agtgaactga gagcccagac gccgatgaag atcaactggc ctgcctcagc ggcgcctagc
     3781 atcaaatgaa acttgctcca ggcgccagcc atcggtggca ggccgatgat actcaacgat
     3841 ccgatcagga aagcgcccat ggttatcggc atcttgcgac cgatgccatc aagttcacta
     3901 accagggttt tgtgggcagc ggtatagatg gcgccggcac agaagaaaag ggtgatctta
     3961 ccaaaggcgt gcatggcgat atgcaagccg ccgccaatca cactggcacc ggtagcgagc
     4021 gcagccccta agacaatata ggatagctgg ctaacggtcg aatacgcgag ccgggctttg
     4081 aggttgtcct tgtacatggc gatgatggaa gcaaacagca gcgtgatcgt ggccacccac
     4141 atcaaccaca cattcgagcc agaggctgca agaaagtcga taccgaagat ataaacaata
     4201 attttcagca ccgtaaatac gcccgctttt acgacagcaa cggcatggag cagggcgcta
     4261 actggcgtcg gcgccaccat ggcggctggc agccagcgat ggaacggcat gagggcggct
     4321 ttgccggtgc caaacataaa caggaatagc aagatgccga ccatcgggcc ctcagcttta
     4381 ccggcaagga tgccgcctgg tttgaaatcc agggtaccag taagactcca ggtccagata
     4441 actgccagca ataggaagcc gatagatgtg ctcagcaata tgccgagata ggttcgtccg
     4501 cctcgtttgg cggtttccgt tccggcgtgg gtgaccaaag gaaatgtgga cagagtcaac
     4561 gcttcataga ataaaaacaa agtaaacaga ttgccggcaa aggcaatgcc gacggcgcat
     4621 gcaagagcaa tggcaaagaa gaaatagaag cgggtttgat tggcttcgtt gttgcctcgc
     4681 atatagccga tcgaataaag cgaagtcaca atccataggc cggaggcgat tagcgcgaac
     4741 agcataccga gcggctcgac cgtaaattta agctcgatgc ccgggaagac ttctaaaagg
     4801 gagacgctcg gccgcccacc ccgggtcact acatgtgtca gggaacctac gacgaggaac
     4861 atggtgacgg ctgttactag tgtaaccgat tcccgcaaat tcggcatttt gccggtcagc
     4921 aggattacga gagagccgac aagtggtacg gcgatagccc agaggatata attctcggcg
     4981 atcatggtgc gcctctaatc aggagagtag ccgcggcctt agccgagccc accgtaatgt
     5041 ccgtatccag accgaaatag aagttagctc cgaccaacac ccacattggg atcagcatgg
     5101 ccaacggagc ttcgtggata agaggagcat cttgaggccg gggtttgaaa taaaccacct
     5161 cgacaatttt ccagaaataa atcactgcca ggagggagct tatcaaaatt aaacccgcga
     5221 ccggccacca gcctttttca agtgctccta aaatcaaata ccatttgctg acaaagccga
     5281 ccgtgagcgg tacgccgacc agactaaagc cagccagtac aaaagccgcc atactgtatg
     5341 gcattacctt gccgagcccg gccatgtgtt caattttgac ggatttaatg cggaagaaga
     5401 cagcggccag gaccaagaac aatgcgcctt tgatcatggc atggttgaaa agatgcagaa
     5461 tggttgccgt cagacctgtc gcagtcacca tgctgatgcc gataaccata taaccaacct
     5521 gggcgacgct tgaataggcc agcagacgtt tggcgttttt ttggaatatc gctactgctg
     5581 acattgatag aatggcgatt aagctgagca gcaataaaaa ttcgccaatt ggcagggcgg
     5641 taaaaatttt agtgccgaac actgtgaagt agatccgtaa cagtgtatag acggcgactt
     5701 tggttgccgt tgcagcgagg aaggctgtca cgaccgaagg ggcgtaggca taagcatttg
     5761 gcagccagac atgcacgggg aacaacccaa gttttagacc aatgccaaca gtagcaaatc
     5821 cgagcgctac caaaatagtt cgggtttcag ctactgcagg tagtcgctgg gccaaatcga
     5881 ccatattgag agtgccggtc atttgataca tcaagccaac gccaatgatg tagaaggtgg
     5941 cgccgacggt gccgaggatc agataacgaa atgcggcggt gagcgcgttt cgctcagcac
     6001 caaggctgat caagacataa gatgaaagtg atgaaatttc caggaataca aatagattaa
     6061 aggcatcgcc agttatcgta atgccaagca agccggagaa cgtcagcagg tacatcgtgt
     6121 aaaataaata tatccggtca tccggaattt cgctgttaac actgttagga gcaaaaatca
     6181 tactgattga tccaatgctg gtgacaatca acatgacaaa ggccgataac atatcgactt
     6241 tatat
//
LOCUS       DASCNL010000868         1486 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001794427, whole genome shotgun sequence.
ACCESSION   DASCNL010000868 DASCNL010000000
VERSION     DASCNL010000868.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1486)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1486)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001794427"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1114
                     /gene="lpdA"
                     /locus_tag="QF359_11435"
     CDS             <1..1114
                     /gene="lpdA"
                     /locus_tag="QF359_11435"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HJO87565.1"
                     /translation="YLLKKNKVDVIDGHGKLAAKSKLTVEKDGKKVVDLTAKHIILAT
                     GARARSLPGLEPDGKLIWTYKEAMVPDAMPRSLLVVGSGAIGIEFASFYHTLGVDVTV
                     VEVLPRVLPVEDEEISEHAHKAFEKDGLKIMTSSTVTALDKGSDNATATIEQNGQQNK
                     ETTELTVDRVIMAVGIVGNVEELGLESTKVEVDRTHVVINEWCETGEKGVYAIGDLTG
                     PPWLAHKASHEGIICVEKIAGEKGVHPLNTLKIPGCTYCHPQVASVGLTEAAAKDKGY
                     EVKIGRFPFIGNGKAIALGEPEGLVKTVFDAKTGEMLGAHMIGAEVTELIQGYAVGMT
                     LETTEAELMETVFPHPTLSEMMHEAVLDAYGRTIHF"
     gene            1114..>1486
                     /locus_tag="QF359_11440"
     CDS             1114..>1486
                     /locus_tag="QF359_11440"
                     /inference="COORDINATES: protein motif:HMM:NF012792.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJO87566.1"
                     /translation="MIDLIIRPVDASDRDRWWKLWQGYIEFYQATVTDEVSEVTWKRL
                     LDDDVPAFGRVAEHPEHGVIAIMNYVLHLNLWTPKPVCYMEDLFTDLTARGQGAGRAL
                     IESLKETAKAENWHRIYWMTAQ"
BASE COUNT          388 a          346 c          413 g          339 t
ORIGIN      
        1 ctacctgctt aagaagaaca aagttgatgt gattgacggc catggcaagc tcgccgccaa
       61 aagtaaacta accgtcgaaa aggacggcaa aaaagtcgtt gatttgacgg ccaaacatat
      121 cattctggcg accggcgcca gggcgcgttc actgccgggg ttggaacccg acggtaagct
      181 tatttggacc tacaaagaag cgatggtgcc agacgctatg ccgagatctc tgttggtagt
      241 tggctcgggc gccattggca tcgaatttgc cagtttctat cataccctcg gagtagacgt
      301 gacggtcgtt gaagtgttgc cgcgggtgtt gccggttgag gatgaagaaa tttccgaaca
      361 tgcccataag gccttcgaaa aagacggcct gaaaatcatg acctcgtcaa cggtcaccgc
      421 tttggacaaa ggttcagata acgccaccgc cacaattgaa cagaatggcc aacaaaataa
      481 agagacgaca gagcttacag ttgatcgggt gatcatggca gtcggtattg tcggcaatgt
      541 cgaagaatta ggcctcgaaa gcacgaaagt agaggttgat cgcactcatg tggtcatcaa
      601 cgaatggtgc gaaacgggcg aaaaaggtgt ttatgccatc ggtgatctca ccggaccgcc
      661 ctggttggcc cataaagcca gccacgaagg cattatttgc gttgaaaaga tcgccggtga
      721 gaagggtgtg catccactga ataccctaaa gatcccaggc tgcacctatt gccatccgca
      781 agtcgccagc gttggcctca ccgaggcagc ggccaaagat aagggctatg aggttaaaat
      841 cggccggttt ccctttatcg gtaatggtaa ggcgatcgcc ttaggtgagc ccgaaggtct
      901 cgttaaaacg gtgtttgatg ccaaaaccgg tgaaatgctg ggtgcgcaca tgattggcgc
      961 cgaagtgact gaactgatcc aaggctatgc ggttggtatg acgctagaaa caacggaagc
     1021 cgagctgatg gaaaccgtct tcccgcatcc gacactctcg gaaatgatgc atgaagcggt
     1081 gctcgatgca tatggccgga ctatccactt ctaatgattg atctcattat ccggcctgtt
     1141 gatgccagtg atcgtgatcg ttggtggaaa ttgtggcaag gttacattga attttatcag
     1201 gcaaccgtca ccgatgaggt gtctgaggtg acctggaagc gtttgcttga cgatgatgtt
     1261 ccagcctttg gccgcgttgc tgaacaccct gagcatggcg ttatcgccat catgaattat
     1321 gtgctgcatc ttaatctttg gacaccaaaa ccggtttgtt atatggaaga tttattcacc
     1381 gatctcaccg ctcgagggca gggggctggt cgggctttga tcgaatcgct caaagaaacc
     1441 gctaaagcag aaaattggca ccggatttac tggatgacgg cgcaaa
//
LOCUS       DASCNL010000869         5633 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001794444, whole genome shotgun sequence.
ACCESSION   DASCNL010000869 DASCNL010000000
VERSION     DASCNL010000869.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5633)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5633)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5633
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001794444"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..643)
                     /locus_tag="QF359_11445"
     CDS             complement(<1..643)
                     /locus_tag="QF359_11445"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJO87567.1"
                     /translation="MRFGPLVYVLPQYHPVRLYEEICMLDQMSGGRLEVGVGKGISSI
                     ESSYYGLDPEEVTAMYQEYYQFLLAAMKSDEVTFVGKYFSVNHMPIEMKPLQQPHPPL
                     WNGFGNPNATAWPAENAINIISNHNAETMRTITDAYRAEWHRLGRDLDDIPMMGMTRF
                     LVIAGTDDAALAIARRIYPIWYASFMKLWWRHDKIPPLAVYTEDFDGVVASGLA"
     gene            complement(585..845)
                     /locus_tag="QF359_11450"
     CDS             complement(585..845)
                     /locus_tag="QF359_11450"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJO87568.1"
                     /translation="MKFGIFDHVDRGTAPLNEFYEDRLKLAEKYDQAGFYAYHTAEHH
                     ATTLGMASSPSVYLSAVAQRTKLLALWPAGLRLAAISSGSLV"
     gene            complement(866..2530)
                     /locus_tag="QF359_11455"
     CDS             complement(866..2530)
                     /locus_tag="QF359_11455"
                     /inference="COORDINATES: protein motif:HMM:NF006052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HJO87569.1"
                     /translation="MARAADILVQTLIAHGVDRVFCVPGESYLAIIDAMYDAPEIDVV
                     TTRHEGGAGFMAVADAKMTSQPGVAMVSRGPGATNVSIGVHVAQQDAVPMVLFVGQVA
                     RADLGRSAFQEVNYSQTFGDMAKWVIEVHDADKLAENVRRAFTIARSGIPGPVVVSLP
                     EDMLLDETDTPALGPTKIAQPLTDAGDIIELCDMLRAAERPLIIAGGQVGGELGRQAL
                     RTVSEVWSIPVAVAWRHQDIFDVAHPNFACHLAFNMPSLFKETLNEADLVVAIGTRLG
                     DVVTQGYKIPEAPQPKQKLVHVYNDVAPIGNVFETDLGIVADATETLLAVAQANAPEA
                     PEGRADWLKKTHALSADKMKWEMAEADDGVPFGNVVAHLRDIVEDDAITSIDAGNFST
                     FVHRLFDYKTTHTQLAAVAGAMGMGVPSAVAGALRAPGRQVICFVGDGGYQMTGNEIS
                     VAVERNLPIRIFVSNNSSLGTIRLYQEKSYPDRTLATNMTNPDFAKIAKAYGAKGFKI
                     ETNDDIAPVIKKAFKVDGPALIEVNASLEYLAAYINMSQIRDVHKK"
     gene            2778..5015
                     /locus_tag="QF359_11460"
     CDS             2778..5015
                     /locus_tag="QF359_11460"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87570.1"
                     /translation="MGKIDVYPTTAWSAGTGCHGGCGQNLFVEDGRLVKVEGNEDHPW
                     NQGRSCPRALAMTQYVYHEDRITQPQIRVGERGEGKFEPISWDEALDICEERMGKIRD
                     EHGAESVIFVQGTGRDIGGPITFLAYSYGSPNWVQLGLSGHSCYTPRLGAMKTTLGEF
                     AVADCSQFLEKRYEDPEWEAPEYIIVWGQNPPNTCPDGFYGPWIVDCMQRGSKIISVD
                     PRNTWMSTRAEYHLQIRPGTDGALALGMLNIIIEEEIYDKDFVEKWVDGFDAIKERAA
                     EYPVDKVAAITEIPAADIQATARAYANAKQAAIQWGVPIDMCPDGTAVAHAISCLWTV
                     TGNIDIPGGQVIAKPAFGVTAYPFSSEELIELYGKDLITRMNEKRIGADVYPMYKHFR
                     GWASPDVTIEQIETGDPYPIKGAWIQTANVIGGQAARAKFHYDAMKKLDFVAIVDLFH
                     NPTTMALADIILPAATFPEKNSFRSWWTPMDSIKKRVQVGECRSDWEINFELAKRFNP
                     EGLQRWATVIDYFDERMEPSGMTFEDLEAKGGWAMSPEGPGRPYRRYEKGHLRADGKP
                     GFNTPSGKVEIYNKSFEEWGMDPLPFYTEPPQSEASTPDLFKKYPLVMITGARSNLFF
                     HSEHRQIPWLREKEPDPTVEIHPDTAKEYNIYDGEWVHLENDMGHIKRKAVISLKVKP
                     NHVQTLHGWFKPEAEGAEPNLFNVWDYQVNQIIPGPQASKSGFGGGQYKTTLVRLAKI
                     TEGGA"
     gene            5018..5356
                     /locus_tag="QF359_11465"
     CDS             5018..5356
                     /locus_tag="QF359_11465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HJO87571.1"
                     /translation="MAKYGILIDTDFCTGCHTCEVACQQEHDYPVGLNGIKVTEYEYK
                     LANGKVKIDCIPFLTDLCDLCMGRQADGERPSCVKHCQTACMYFGLTSDLAIEAASRP
                     RAVLYTHTPK"
BASE COUNT         1398 a         1551 c         1400 g         1284 t
ORIGIN      
        1 tcgccagccc gctcgcgacg acaccgtcaa aatcttcagt atagacagcc agcggcggaa
       61 ttttatcatg ccgccaccag agcttcataa agctcgcata ccagatcgga taaatgcggc
      121 gggcaatcgc caacgccgca tcatcggtac cagcaataac tagaaagcgg gtcatcccca
      181 tcatgggaat atcatcaaga tcacggccca gccggtgcca ttccgcgcgg taggcgtcgg
      241 tgattgtccg catggtttca gcattatgat tgctgataat gttgatggca ttctccgccg
      301 gccacgcagt tgcattagga ttgccgaaac cgttccagag cggcggatgg ggttgctgca
      361 gcggcttcat ttcaatcggc atatgattaa cactgaaata cttacctaca aaagtgactt
      421 catcggattt catcgccgcc agcaagaact gataatattc ctgatacatc gcagttactt
      481 cttccggatc gagcccgtaa taagaagatt caatcgatga aatccctttg ccgacgccga
      541 cttcgagccg cccgccgctc atttgatcga gcatgcaaat ttcttcatac aagcgaaccg
      601 gatgatattg cggcaagacg tagaccagcg ggccaaagcg caagcagttt ggtgcgttgg
      661 gcgacagctg acaaataaac gctcggcgac gacgccatgc ccaaggtcgt tgcatggtgc
      721 tcggcggtat gataggcata aaaaccagct tgatcgtatt tctcggcgag ctttaaccgg
      781 tcttcataga attcattgag cggggcagtg ccccggtcga cgtgatcgaa tatgccaaac
      841 ttcatactgc cccctatatc gccatctact ttttatgaac gtcgcgaatt tgtgacatat
      901 tgatataggc ggccaaatat tcgaggctgg cattaacctc aattaaagcc ggaccatcaa
      961 ccttaaaggc ttttttgatc actggcgcaa tatcgtcatt ggtctcgatc ttgaagcctt
     1021 tggcaccata agccttggcg atcttggcaa agtccggatt ggtcatattg gttgccaagg
     1081 tccgatccgg ataagatttc tcctgataga gccggatggt gccgaggctg ctattattcg
     1141 agacaaatat acggatcggc aaattacgct caaccgccac ggatatctca tttccggtca
     1201 tctgatagcc accatcgccg acaaagcaaa tcacctgacg accaggggcg cggagagccc
     1261 cggccactgc cgacggcacc cccatcccca tcgcgcccgc aaccgctgcc aattgagtat
     1321 gggtggtttt gtaatcaaat aaacgatgga cgaaggtcga aaaattaccg gcatcaatcg
     1381 acgtgatggc atcatcctcg acgatatcac gcagatgggc gacaacattg ccgaacggca
     1441 caccatcatc agcctcggcc atctcccact tcattttatc ggcacttaaa gcgtgggttt
     1501 tcttgagcca atcggcccgg ccttccggtg cttccggcgc gttcgcctgc gcaaccgcca
     1561 gcaaagtctc ggttgcatcg gcgacaatcc caagatcagt ttcgaagaca ttgccgatcg
     1621 gcgcgacgtc attatataca tgcaccagtt tttgcttggg ctgaggcgcc tccgggattt
     1681 tatagccttg agtgacgaca tcgccgaggc gcgtgcctat agcaaccacc agatcggcct
     1741 cattgagggt ttctttaaac aatgacggca tattaaacgc caagtgacag gcaaaattcg
     1801 ggtgggcgac atcaaaaata tcctggtgcc gccaggcaac cgccaccgga atactccaga
     1861 cttcgcttac cgtcctcaaa gcttggcgac caagctcacc gccgacctga ccaccggcaa
     1921 taattaaagg gcgttccgct gcgcgcaaca tatcgcaaag ctcgatgata tcaccggcat
     1981 cggtcagtgg ttgggcaatc ttggttggcc ctaatgccgg tgtatcggtt tcatctagca
     2041 gcatatcttc cggcagggaa accaccaccg gtcccggaat gcctgaccgc gcgatggtaa
     2101 aagcccggcg cacattttca gctagtttgt cggcgtcatg aacttcaatc acccatttcg
     2161 ccatatcacc aaaggtctgg ctgtaattta cttcctgaaa agcgctgcga cctaaatcag
     2221 ctcgggcgac ttggccgacg aacagcacca tcggcacggc atcctgttgc gccacatgta
     2281 cgccaattga aacattggtc gcaccgggac cgcggctgac catggctaca cccggctggc
     2341 tcgtcatctt ggcatcggcg accgccataa acccggcgcc gccttcatgg cgtgttgtca
     2401 ccacatcaat ttccggcgca tcatacatag catcaatgat ggcgagataa ctttcccccg
     2461 gcacacaaaa aacgcgatca acgccatgcg ctattaaggt ttgaactaat atgtctgcgg
     2521 cccgtgccat gaattcccct tctgccgaaa ctggctttta ttatgacttt tactcgagaa
     2581 tttcgggctc ctggaatttg gctgcatcac ccctccaaat tctctcgata ggacttacca
     2641 agcctgacct catgttaaaa ggctgaattt ccgattaatg gcaaaaaaca gtttgtctaa
     2701 ctaattagct ttttgatagc ttggtaaatt agataattaa ataaagaaat ctgtgattta
     2761 gatgaaggtt ttgtgttatg ggaaagatag acgtatatcc aacaacagca tggtccgccg
     2821 gtactggatg tcacggtggc tgcggtcaaa acctctttgt tgaggatggc aggctcgtca
     2881 aggtagaagg caacgaagat catccctgga atcagggccg ctcctgtccc cgcgccctgg
     2941 cgatgaccca atacgtctat catgaggatc gcatcactca gccgcagatc cgggttggcg
     3001 aacgtggtga aggcaaattc gagccaatct cttgggatga agcgcttgac atctgcgaag
     3061 agcgcatggg taaaatccgc gacgaacacg gcgcggaatc ggtgatcttc gtgcaaggca
     3121 ccggccggga tatcggcggg ccgatcacct tcctggccta tagttacggc agtcccaact
     3181 gggtgcagct cggtctttcc ggccattcct gttatacccc gcgcctgggc gcgatgaaaa
     3241 ccaccctcgg tgaattcgct gtcgccgatt gttcacaatt cctcgaaaag cgctatgaag
     3301 acccggaatg ggaagctcct gaatacatca tcgtctgggg tcaaaatccg cctaacacct
     3361 gtcccgatgg tttttatggc ccgtggattg tcgattgcat gcagcgcggc tccaaaatta
     3421 tctcagtcga tccgcgcaat acctggatgt cgacccgggc agaatatcat ctacaaattc
     3481 gccccggcac cgatggcgcc ctggcgctcg gtatgctcaa catcatcatt gaagaagaaa
     3541 tatatgacaa agactttgtc gaaaagtggg ttgatggctt tgatgcgatc aaagaacgcg
     3601 ccgccgaata cccggttgat aaagtcgcgg cgatcacgga aatccccgcc gcagacattc
     3661 aagcaacggc ccgcgcatac gccaatgcca aacaagcggc cattcaatgg ggtgtcccga
     3721 ttgatatgtg cccggacggc accgcggtcg cccacgctat ttcgtgcctc tggacggtta
     3781 ccggcaatat cgatattccg ggcggccagg tcatcgccaa accggccttc ggcgttactg
     3841 cttatccatt ttcctcggaa gaactaatcg agctttacgg caaagatctg atcacccgca
     3901 tgaatgagaa acggatcggt gctgatgtct atccgatgta taagcatttc cgcggctggg
     3961 cctcacccga tgtcaccatc gagcagattg aaaccggtga tccctatcca atcaaagggg
     4021 cttggattca aaccgccaat gtcattggtg gtcaggccgc ccgcgccaaa ttccactacg
     4081 atgcaatgaa aaaactcgac ttcgttgcca ttgtcgatct gttccataac ccgacgacca
     4141 tggccttggc tgatataatt ctgccggcgg caaccttccc ggagaaaaac agtttccgct
     4201 cctggtggac cccgatggac agcatcaaaa agcgcgtcca agtcggcgaa tgccgctcag
     4261 actgggagat caatttcgaa ctcgccaaac gcttcaatcc ggaaggtctg caacgctggg
     4321 ccacggtcat tgattacttt gatgaacgga tggagccctc cggtatgact ttcgaagatt
     4381 tagaagccaa gggcggttgg gcgatgtctc cggaaggccc gggccggcca taccggcgct
     4441 acgagaaagg tcatttacgg gccgatggta agcccggctt caacacgccg tcggggaagg
     4501 ttgagatcta taacaaatcc tttgaggaat ggggcatgga tcccctgccc ttctataccg
     4561 agccgccgca aagcgaagcg tctacgccgg acttgttcaa aaagtatccc ctggtgatga
     4621 tcaccggcgc ccgctccaat ttgtttttcc attcggagca tcgccaaatc ccctggctgc
     4681 gtgaaaaaga gcccgacccg acagtcgaaa ttcatcccga cacggcaaaa gagtacaata
     4741 tctatgacgg tgaatgggta catctcgaaa atgacatggg ccatatcaag cgcaaagccg
     4801 taatctctct caaagtcaaa ccgaaccatg tgcaaacctt gcatggctgg tttaagcccg
     4861 aagccgaggg ggctgagccc aatttattca acgtctggga ttatcaggtc aatcagatca
     4921 tccccggacc tcaggccagc aaatcaggct ttggcggcgg tcagtataaa accacattag
     4981 tgcgcctcgc caagatcacc gaagggggtg cgtaaccatg gctaaatacg gtatcttaat
     5041 tgacacggac ttctgtaccg gctgtcacac gtgtgaagtt gcctgccagc aggaacatga
     5101 ttatccggtc ggccttaacg gtatcaaagt cactgagtac gaatacaaac tggccaacgg
     5161 caaggtaaag atcgattgta taccgtttct caccgatttg tgtgatctct gcatgggccg
     5221 ccaggctgac ggtgaacggc caagctgcgt caaacattgc caaaccgcgt gcatgtattt
     5281 tggcctgacc agtgacctcg ccatcgaggc ggcatcgcgc ccccgggctg tgctctatac
     5341 ccatacgccg aagtaaggct agacacccaa ttagtactgc ttgatcatat ttttgtttgt
     5401 ttgcggttaa aaagaagaaa atcccaacca ctcgtcatgc gccggctcga cccgcgtaac
     5461 accttttctg atgggtggta ttggtatagc tggactattc ttgagcgaat ttagcgcaac
     5521 taaaagcgct gttgccgatg atatggattg ggtatttgca ctataactct gcgacggtat
     5581 cactttcgat ctcaatgatc gaaccaaaat cgaaattggt taccactatt tcg
//
LOCUS       DASCNL010000870         1183 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001795183, whole genome shotgun sequence.
ACCESSION   DASCNL010000870 DASCNL010000000
VERSION     DASCNL010000870.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001795183"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            9..>1183
                     /locus_tag="QF359_11470"
     CDS             9..>1183
                     /locus_tag="QF359_11470"
                     /inference="COORDINATES: protein motif:HMM:NF012885.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87572.1"
                     /translation="MSDTPWKAEGWFTSPWNFDPEVTKDWKFPEKIQIHDVTLRDGEQ
                     QAGLAFDYGDKIRIAEGLAEAGVHRIEAGMPVVSRDDAKVVTELAKRDFGPKVYSFAR
                     CMVDDVKRAVDAGVKGVIMEVPASPHLIEKGYRWELDRAIDLSIESTTYAHEQGLEVV
                     FFPIDFTRSDLHWVCDLIERVGDEGHMDGLALVDTMGATSIHAMQFFVRTMKNRFPDK
                     PLEAHFHMDFGLGIANTLMACSEGVEVIQSTVLGLGERAGNVPMEETVMALLTLYNID
                     IGIKTQQLKPLADMVAEVSGATILGNRPIVGDDLFKVESGIIATWLLNCGYEDQTEVV
                     PFRPSLVGQAEPEAVMGKGSGIDNCKHWLDKFQIQANEDEAMEVLMAVKEWGLVHKRL
                     "
BASE COUNT          285 a          299 c          308 g          291 t
ORIGIN      
        1 atatttagat gtcagacaca ccttggaaag ccgaaggctg gttcaccagc ccctggaact
       61 tcgacccgga agttaccaaa gattggaaat ttccagaaaa aattcaaatt catgacgtaa
      121 ccttgcgtga tggtgagcag caagccggtc ttgcttttga ctatggtgac aaaatccgca
      181 tcgccgaagg cctcgctgaa gcaggtgttc atcggatcga agctggtatg ccggtggtct
      241 cccgagacga cgctaaggtt gttaccgagc ttgccaaacg cgactttggc ccgaaagttt
      301 attctttcgc tcgctgcatg gttgatgatg ttaaacgcgc ggtcgatgcc ggggttaaag
      361 gcgttattat ggaagtaccg gcaagcccgc atttgatcga aaagggctat cgttgggaat
      421 tggatcgcgc cattgatctt tccattgaat cgacaaccta cgcccacgag caaggccttg
      481 aagttgtctt tttcccgatc gactttaccc gctctgacct ccactgggtc tgcgatctca
      541 tcgaacgggt tggcgatgaa ggccatatgg acggtctcgc cctggttgat accatgggcg
      601 ctacctcaat ccacgccatg cagttttttg tccgcaccat gaaaaaccgc tttccggaca
      661 aaccactgga agcccacttc cacatggact ttggcctcgg tatcgctaat acgttaatgg
      721 cgtgttccga aggtgttgaa gttattcagt caaccgttct cggcctcggc gaacgtgctg
      781 gtaacgtgcc gatggaagaa acagttatgg cgttattgac tctctataat atcgatatcg
      841 gtattaaaac gcagcaattg aagccactgg ctgacatggt cgctgaagtt tccggtgcca
      901 ctattctcgg taaccggcca atcgttggtg atgatctgtt taaagttgaa tcgggcatca
      961 tcgccacctg gctcttgaat tgtggctatg aagatcaaac tgaagtcgtg ccgttccgcc
     1021 cgagcctagt tggccaagcc gaaccggaag ctgtcatggg caaaggctcc ggcatcgaca
     1081 actgcaaaca ctggctggat aaattccaga tccaggccaa cgaagacgaa gccatggaag
     1141 ttcttatggc cgtcaaggaa tggggcctgg ttcacaagcg cct
//
LOCUS       DASCNL010000871         1720 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001799163, whole genome shotgun sequence.
ACCESSION   DASCNL010000871 DASCNL010000000
VERSION     DASCNL010000871.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001799163"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="QF359_11475"
     CDS             <1..681
                     /locus_tag="QF359_11475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-copper oxidase subunit III family protein"
                     /protein_id="HJO87573.1"
                     /translation="APGFAGIAEDWASDQRTFKNVPWGKAMMWIFLLSDTFIFSSFLV
                     GYMKVRLSTTTPWPNPSEVFALSFGGEPIPLILIAIMTFILITSSGTMVLAVNYGYRK
                     DKSKTAIYLLITALFGATFVGMQAFEWTKLIVEEGVRPWANPMGASQFGSVFFMITGF
                     HGFHVSVGVLFLILVARKVWRGDYDIEKRGFFTSRKGNYEIVETMGLYWHFVDLVWVF
                     IFAFFYLW"
     gene            691..1026
                     /locus_tag="QF359_11480"
     CDS             691..1026
                     /locus_tag="QF359_11480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HJO87574.1"
                     /translation="MVHADTHTQGQQHPLGIYIKVWALLFVLSTFSYLVDFFHVEGYL
                     RWTLILIFMFLKAGFIIAVFMHIKWERLALSFAILGPPTVLLVLIAMLTIEGDYTFLT
                     RGIFLTTGS"
     gene            1089..1424
                     /locus_tag="QF359_11485"
     CDS             1089..1424
                     /locus_tag="QF359_11485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87575.1"
                     /translation="MESANAHFGLAGDEEIGHGLFIGYCLLLICLASFVVYRKWLRTS
                     ESSEQRVLKRDLRELRRAHNSCKTQLQNAEDYPKECGLTEAERLEREKSVTLIQRQID
                     KAEAHLAAA"
BASE COUNT          398 a          388 c          434 g          500 t
ORIGIN      
        1 gctccgggct ttgccggcat tgccgaagat tgggcatccg atcagcgcac gtttaaaaat
       61 gtgccctggg gtaaggcgat gatgtggata ttcctgctca gcgatacctt catcttttcc
      121 agtttcctgg tcggttatat gaaagtaaga ctttcgacga caacgccgtg gccaaatcca
      181 agcgaggtat ttgccctgtc attcggtggt gagccaattc cacttatcct aatagctatt
      241 atgacattta tcctgatcac cagtagcggt acgatggtgc tggcggttaa ttacggctac
      301 cggaaagaca agtccaaaac tgcaatttat ctgctcatca cggctctgtt tggcgccaca
      361 ttcgtcggta tgcaagcctt cgaatggacc aaattaatcg ttgaagaagg tgtgcgtccg
      421 tgggccaatc cgatgggggc ctctcaattc ggctcggtct ttttcatgat tactggcttc
      481 cacggtttcc acgtctcagt tggtgtgttg tttttgatcc tcgtcgcccg caaggtttgg
      541 cgcggcgact atgacatcga aaaacgcggc ttttttacca gccgcaaagg caattatgaa
      601 attgtcgaga ccatgggcct ctattggcac ttcgtcgatt tagtttgggt tttcatcttt
      661 gcattctttt atttgtggta gggggtcgat atggtacatg cagacactca cactcaaggc
      721 cagcaacacc cgctaggtat ttacatcaag gtttgggctt tgctgtttgt tctcagcacg
      781 ttttcctatc tcgtcgattt ttttcacgtc gaaggatatc ttcgttggac cctgatccta
      841 atttttatgt ttttgaaagc aggatttatt attgctgtct ttatgcacat taagtgggaa
      901 cggctggctt tgagctttgc tattttaggt ccgccgacgg tgctgttggt tttgatcgca
      961 atgttgacga tcgaaggcga ctacactttc ctgacgcgtg gtatatttct caccactgga
     1021 tcatagtcgc tggagtaatg cgttacttaa ttttaacggc aattgtattt attgggagtt
     1081 ggactcccat ggagtccgcc aacgctcatt ttggcttggc cggtgacgaa gaaattggcc
     1141 atgggctttt tatcggttat tgcctgctgt tgatttgcct cgcttcattt gttgtctatc
     1201 gcaaatggct tcgaacttct gaatcatccg aacaacgagt gttaaaacgt gacttacgag
     1261 aactccgacg cgcccacaac tcatgcaaga ctcaattgca aaatgccgag gactatccca
     1321 aggaatgcgg attaaccgag gctgaacgcc tggagcgtga aaagtcagtc accttgatcc
     1381 aacgtcaaat cgacaaagct gaagcccatc tcgccgcggc ttaggaaaaa tatcgtcagc
     1441 agtttatttc tctattttat cctgccataa ctggatggca gtactaggcg cggaaaggcc
     1501 gaaaggtact cacccagcct atctggcaat aggaaaacaa aaaggtaaaa acacgtggcg
     1561 ttgtaaggaa tgccatggct gggattacat gggcgaagac ggtgcctatg gctgggcggt
     1621 tggtgattat tgatctagtg tttgcgcaag cggaggaacg cacggtaatc cggaatgttg
     1681 cagccaatac cggggttaaa ttcgatggta tctggcaggt
//
LOCUS       DASCNL010000872         1182 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001800582, whole genome shotgun sequence.
ACCESSION   DASCNL010000872 DASCNL010000000
VERSION     DASCNL010000872.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1182)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1182)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1182
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001800582"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="QF359_11490"
     CDS             <1..593
                     /locus_tag="QF359_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DapH/DapD/GlmU-related protein"
                     /protein_id="HJO87576.1"
                     /translation="MANGATLINPASVYFSHDTKIGQDVMIDSNVYFGPGVKICDGVH
                     IRAFCHIEGAFVENNAIIGPFARLRPGADIGEDVHIGNFVEVKNATLAAGAKANHLSY
                     IGDAKIGPKANIGAGTITCNYDGYVKSMTEIGAGAFIGSNTALVAPVKVGDGAITGAG
                     SVITKNVDADALAITRSEQKIVDGYANKMSKNKGKK"
     gene            594..>1182
                     /locus_tag="QF359_11495"
     CDS             594..>1182
                     /locus_tag="QF359_11495"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617989.1"
                     /note="Catalyzes the first step in hexosamine metabolism,
                     converting fructose-6P into glucosamine-6P using glutamine
                     as a nitrogen source; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HJO87577.1"
                     /translation="MCGIVGIIGKSDVAPHLLECLKRLEYRGYDSAGIATLENGDIDR
                     RRAEGKLVNLEARLADQPLPGSIGIGHTRWATHGVPNEINAHPHATDKVAVVHNGIIE
                     NFQTLRDELEKAGHELASDTDTEVVAHLITHYLESGQSPEEATAATLARLEGAFALGI
                     IFAGEHDLMIAARQGSPLAIGYGDGEMFLGSDALAL"
BASE COUNT          284 a          295 c          327 g          276 t
ORIGIN      
        1 cgatggcaaa tggcgcgacg ctgattaacc ctgcaagtgt ttatttttca catgatacta
       61 aaatcggcca ggatgtgatg attgattcca atgtttattt cggccccggc gtcaagattt
      121 gtgacggcgt gcatatccgc gccttctgtc acatcgaggg cgcgttcgtc gaaaataatg
      181 caattatagg tccgtttgcc cggcttcgcc caggggccga tattggcgaa gacgttcaca
      241 tcggtaattt tgttgaagtt aaaaacgcaa cccttgccgc gggcgccaaa gccaatcatt
      301 tgagttatat cggtgacgcc aagatcgggc caaaagccaa tatcggcgcc ggtacgatca
      361 cgtgtaatta cgatggctat gttaaatcga tgacggagat tggcgccggc gcattcattg
      421 gctcaaacac ggcgctggtg gccccggtta aagttggcga cggtgcgatc accggtgcag
      481 gttcggtaat tactaaaaac gtcgatgcgg atgcgctcgc catcacgcgc tcggagcaaa
      541 aaattgtcga cggctatgca aataaaatga gcaaaaataa aggtaaaaag tagatgtgcg
      601 gtattgtcgg gatcatcggt aaaagcgatg tcgcgccgca tctgctcgaa tgtttgaagc
      661 gcctcgaata tcgcggctat gattctgctg gtattgcaac gctggaaaac ggcgacattg
      721 accgccgccg cgccgaaggc aaattagtca atctggaggc gcggctggcc gatcaacctc
      781 tgccgggttc tattggtatt ggccatacgc gctgggcgac ccatggcgtg ccgaacgaga
      841 taaatgccca tcctcacgct accgataaag tcgccgtcgt ccacaatggc attatcgaaa
      901 attttcaaac cttaagagat gagctggaaa aagccgggca tgagctcgct tccgataccg
      961 acactgaagt tgtcgctcat ctgatcaccc attatctgga atcgggtcag tcgccagaag
     1021 aagctacagc cgccactttg gccaggctcg aaggcgcctt tgccttgggc ataatatttg
     1081 ctggtgagca cgatttgatg atcgctgcgc gccagggctc accgctggcc atcggctatg
     1141 gtgacggtga aatgttcttg ggctccgatg ctttggcgct cg
//
LOCUS       DASCNL010000873         1094 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001800708, whole genome shotgun sequence.
ACCESSION   DASCNL010000873 DASCNL010000000
VERSION     DASCNL010000873.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001800708"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1094)
                     /locus_tag="QF359_11500"
     CDS             complement(<1..>1094)
                     /locus_tag="QF359_11500"
                     /inference="COORDINATES: protein motif:HMM:NF013707.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HJO87578.1"
                     /translation="VKIVVVADDIKKYDEYGPDYKFPHGVELFPRKEMTTVMKTCRDF
                     QGVSVLIYDQVCATERRRRRKKGLMPPSTKRVVINERVCEACGDCSIQSNCVAIRTLE
                     TPLGTKRQIDQSSCNMDLLCLEGFCPALVTVEGGTLKMPSPSEELNISLDELSAKTLT
                     KPYDILIAGVGGSGLITIGNLLGMAAHLEGKECSVLDNTGIARMGGTVSTHVRLGESD
                     ARLNASRIADVDADVLIGGDPVVSASTEVLTRICADRTRAVVNIFIAPAAAQAADPEL
                     VFDSESILAKVKSRVDTGQSVFINVTDLAHGLLGNKIYTNIFMLGIAFQKGLIPLELN
                     SIRQAIELNDKAVEENISAFNWGRRYALDP"
BASE COUNT          279 a          308 c          240 g          267 t
ORIGIN      
        1 tctggatcga gcgcataacg gcgcccccag ttgaacgctg atatattttc ctcgaccgcc
       61 ttatcgttca gctcaatagc ctgcctgatt gagtttaatt ccagtggaat caaacctttt
      121 tgaaaagcaa tacccagcat aaaaatgttg gtgtaaatct tattgccaag caggccatga
      181 gctagatccg ttacattgat aaaaactgat tggccggtgt ctacccggct tttgactttg
      241 gctaaaatac tttcactatc aaaaaccagt tcgggatcag cggcctgcgc ggcagcgggg
      301 gcgataaaaa tatttaccac cgcccgggtc cggtcagcac aaattcgggt cagaacctct
      361 gtgcttgccg agaccaccgg atcaccgccg atcagcacat ccgcatcaac atcggcgatc
      421 ctggaagcgt tgagccgggc atcactttcg cccaaccgga catgggtcga taccgtgcca
      481 cccatccggg cgatgccggt attatccaat accgaacatt ctttaccttc gagatgcgcc
      541 gccatgccga gcaaattgcc aatagtaatc agcccgctac caccgacacc ggcgatcaaa
      601 atatcatagg gtttggttaa agttttagcg gatagctcat cgagcgaaat atttaactcc
      661 tccgatgggc tcggcatttt caatgttcca ccctcaaccg ttaccagcgc cggacaaaat
      721 ccctcgaggc acaacaaatc catattgcag cttgattgat caatttgacg cttggtgcca
      781 agcggtgttt ccagggttct aatggcaaca caatttgact ggatcgaaca atcgccacag
      841 gcctcacaga cgcgttcatt gatcaccaca cgcttggtcg aaggcggcat cagacctttt
      901 ttacgccgcc gccgccgttc cgttgcgcaa acttgatcgt agattaaaac tgaaacccct
      961 tgaaagtccc ggcacgtttt catcaccgtg gtcatttctt tacgtgggaa caactcaaca
     1021 ccgtgcggga atttatagtc gggcccatac tcatcatatt ttttaatgtc atcggccaca
     1081 accacgatct tgac
//
LOCUS       DASCNL010000874         2441 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001805571, whole genome shotgun sequence.
ACCESSION   DASCNL010000874 DASCNL010000000
VERSION     DASCNL010000874.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001805571"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            665..1684
                     /locus_tag="QF359_11505"
     CDS             665..1684
                     /locus_tag="QF359_11505"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HJO87579.1"
                     /translation="MSNKLLTSLLIGAVAGLIAFSPTNTSAQGILKGDTGGVGSVNHT
                     FMIIMSTVLQKKIGINLQVNEGQTLTKSALKLGQGKIDVSIVPPVMVPWMHKGTRFYK
                     KRPGPAKKAIENIRLIMAYGSGVRHYMVWADSGIKTWADVKGKRVFVGPPRGGASPVA
                     IQAIKLNSGLVNKKDYKEVRMPWNSGIQAMSDGKLDVFVRPAGIGAASIDQLGAKRKF
                     RLLNINPNAPGMKKFISSSGRRVQTIPAGTYNNQIDNDKDVITDGFRHQLAVRKDMSD
                     DLVYRITKTIFDNLPEMQKSAVTLRDVSLDDPFTASNIPLHPGAIRFYKEAGKKIPAH
                     LVPGS"
     gene            1835..>2441
                     /locus_tag="QF359_11510"
     CDS             1835..>2441
                     /locus_tag="QF359_11510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87580.1"
                     /translation="MNEQVPRDQSQRFIRYAAFTVALVIAITGVLNSMPTYGFFTPIG
                     PFPAIILRPIFVGAAVFLVLANNSFTSTFAQRWPNFKWLGRVIDVVILLFTWWVLWEY
                     YDLQVSEEVDGFGDVGMYDFSISLLAASLFIILSWKTWGRPLSIVGILALIYFYTGEY
                     WPWIFETARVDLPETSEDLWFNQGDGILGTIMGIIIFTVFPL"
BASE COUNT          632 a          571 c          609 g          629 t
ORIGIN      
        1 tcaaggcgcc aaacagtttt ataccgataa cggactctaa ctcactaacc aagacgcgga
       61 ccttccaggg gcatcttgct cgactgcgcc ggcaatctgc tggaagtgag gatggagtgg
      121 ttggtaaagt ccaaaagcga cctaatcact taagtccatc taaacagccg cgtccggtgg
      181 cgcaggtctg accgagcgaa atttcagcca atgccaaacc aggaaatcta gggcaaatcc
      241 tgccgccggc cagtggatta agggatcaat tatcagcacc gccactgcca gggcgagatc
      301 gatctgaagc ctttgatgtg tggaaaaacg caggtgctga agcctagaag aaacgctacc
      361 gattttatgt gcctattgga tgttaacgtg ataatgccat agttttaggt agattctttt
      421 gtggcgatga aatcaaggct gacttctaat gcagagtgca ctatataatg cagagtgcgc
      481 tatacagatt taagaatttt agtagcaata catgctcaat taattaaatt ttcttatata
      541 atatatgaat tctaataatt tgttttaatg aataattcgt gcaagttaga agccgtaagt
      601 ctaagaataa tgcactttac agtaaataac ggctaataaa cgttcaatag ggagaacaga
      661 acaaatgtcc aataaattat taactagttt gttaattggc gccgtcgccg gcctaattgc
      721 cttcagtccg accaacacgt ccgcgcaggg catattgaaa ggtgacaccg gcggtgttgg
      781 ttcagtgaac cacacattca tgatcattat gtcgacggtt ctgcaaaaaa aaataggcat
      841 caatttgcag gtgaatgagg gccaaacctt gacaaaatca gcccttaaac ttggccaggg
      901 caagatcgac gtgtcgattg tgccgcccgt tatggtcccc tggatgcata agggcactcg
      961 cttctacaag aaaaggccgg gacccgctaa aaaagctatt gagaacatcc gtttgatcat
     1021 ggcctatggg tctggagttc gccattacat ggtttgggct gattccggca tcaagacttg
     1081 ggccgacgtt aaaggaaaac gggtttttgt tggaccacca cggggcggtg cgtcaccggt
     1141 cgccattcag gcgatcaaac taaactccgg gttagtgaac aaaaaagatt acaaggaagt
     1201 gcgtatgccc tggaactcgg gcattcaagc aatgtccgac ggcaagctgg acgtatttgt
     1261 ccgcccggcc ggcatcgggg cggcttcgat tgaccagcta ggggccaagc ggaagttccg
     1321 tcttctcaat attaacccaa atgcgccggg gatgaagaag ttcatctcgt ccagcggccg
     1381 tcgggttcag acgatccctg ccgggaccta taataatcag atcgacaatg ataaggacgt
     1441 catcaccgac ggatttcgtc atcaactggc cgtgcgaaaa gatatgagcg atgacctcgt
     1501 ttatcggatc actaaaacga ttttcgacaa tctccctgag atgcaaaaat cggcggtcac
     1561 attgcgggac gtttcgttgg atgatccgtt tacggctagt aacataccgc ttcatccagg
     1621 tgccatccgg ttctataagg aagccggtaa gaaaatcccg gcccacttgg tgcctggcag
     1681 ctagggcgtt cctgaaggcg ccaacaatta gtctggaaaa ttaatagtgg gatggtcgcg
     1741 acctatgcgc ggccatctcc tttgagaatg tgtagtttta tttcctaaac tgtagcctcc
     1801 aaacaggctt gtatgcacga gagtggggat atttatgaat gaacaggttc ctcgggacca
     1861 aagccagcgg ttcattcgct acgcggcatt taccgttgct cttgtcatcg ctataaccgg
     1921 cgtactgaac tcaatgccaa cttatgggtt tttcacgccc attggcccct ttcccgccat
     1981 catccttcgg cccattttcg tgggcgctgc ggtgttcctt gtgcttgcca ataattcgtt
     2041 cacaagcacg tttgcccaaa ggtggccaaa cttcaaatgg ctcggtcgtg tcatcgacgt
     2101 tgtaattttg ctgttcacct ggtgggttct ctgggagtat tacgatcttc aagtctccga
     2161 agaggtcgac gggtttggtg acgtcggaat gtatgatttt tcaatatccc tactcgcagc
     2221 aagtttattc atcattctga gttggaaaac ttggggcagg ccactgtcga ttgttggaat
     2281 tctcgcgttg atatattttt acaccggaga gtattggccc tggatatttg agacagctcg
     2341 ggtcgacctg cccgaaacct ccgaggacct ctggttcaac caaggggacg gtattctcgg
     2401 cacgatcatg gggatcatta tcttcaccgt ctttccattg t
//
LOCUS       DASCNL010000875         1063 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001810274, whole genome shotgun sequence.
ACCESSION   DASCNL010000875 DASCNL010000000
VERSION     DASCNL010000875.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1063)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1063)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001810274"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="QF359_11515"
     CDS             complement(<1..586)
                     /locus_tag="QF359_11515"
                     /inference="COORDINATES: protein motif:HMM:NF018004.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 domain-containing protein"
                     /protein_id="HJO87581.1"
                     /translation="MSKPTQNSRQDHIVQPFAALRPIPDLAQEVVAPPYDVVNTAEAL
                     ALVEEKPWSFLHISKPEIDLPEGTDVYSDEVYSKASENIKHMVAEGILRQDPEDYYYI
                     YQLQLGDHIQTGIVGAGSVAAYEANLIRRHEFTQPNKETDRVRQIDAVNAQTGPIFTT
                     HKPDVLLAEVIQKTIKGAADYHVVGEGKVEHTLWV"
     gene            complement(700..>1063)
                     /locus_tag="QF359_11520"
     CDS             complement(700..>1063)
                     /locus_tag="QF359_11520"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389732.1"
                     /note="catalyzes the formation of L-tryptophan from indole
                     and L-serine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TrpB-like pyridoxal-phosphate dependent enzyme"
                     /protein_id="HJO87582.1"
                     /translation="AGGLRYHGMAPLVSHLVELDAIEARAYDQTECFKAAVDFARAEG
                     VVPAPESSHAVRGAIAEALACKEEGQSRSILFNLSGHGHFDMQAYTDYFSGQLEDVQY
                     DKDKLNAALAELPEIAAE"
BASE COUNT          278 a          276 c          236 g          273 t
ORIGIN      
        1 ccacccaaag tgtgtgttcg actttgcctt cgccgacgac atgataatcg gcagcgcctt
       61 taattgtttt ttgaattact tcggccagca aaacatcagg cttgtgagtg gtgaagatcg
      121 gaccggtttg cgcgttcact gcatcaatct gccgtacccg gtcggtttcc ttgttgggct
      181 gcgtaaattc gtggcgacga ataagattgg cttcgtaagc tgccaccgaa cccgcaccga
      241 caataccggt ttggatatga tcacctagct gaagctgata gatataataa tagtcttccg
      301 ggtcttgcct gagaatccct tcagccacca tgtgcttgat attctcggat gcctttgagt
      361 aaacttcatc agaatagaca tccgtacctt ccggcagatc gatttcaggc ttggagatat
      421 gaagaaaact ccatggcttt tcttccacta aagcaagcgc ttcagcagta ttcaccacat
      481 catagggcgg cgcgacaacc tcttgcgcca aatctggaat tggtcgaagc gccgcgaacg
      541 gctgcacgat atggtcttgc cgcgaattct gtgtcggttt actcattaaa atttcctacc
      601 aaaaaaaagg ctgccgcctg atccttataa cgatcaaacg acagccttat ttagcaagct
      661 taccagccaa gttaaaccgg taattagctg gtagttaatt tattcggcag caatctccgg
      721 caattcggca agcgctgcat ttaatttatc tttatcgtac tgaacatctt ccagttgacc
      781 ggaaaaataa tcggtataag cctgcatatc gaaatgtccg tgtccagata ggttaaacag
      841 gattgagcgc gactgtcctt cttctttaca agccaaagct tcggcaattg cgccgcgaac
      901 agcgtggctc gattcaggag ccggaacaac accttcagca cgggcaaaat caacagccgc
      961 tttaaagcat tcagtttgat cataagcgcg ggcctcgatc gcatccaact ccaccaaatg
     1021 actaaccagt ggtgccatcc cgtgatatcg caaaccacca gcg
//
LOCUS       DASCNL010000876         2738 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001813652, whole genome shotgun sequence.
ACCESSION   DASCNL010000876 DASCNL010000000
VERSION     DASCNL010000876.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2738)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2738)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2738
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001813652"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            216..1082
                     /locus_tag="QF359_11525"
     CDS             216..1082
                     /locus_tag="QF359_11525"
                     /inference="COORDINATES: protein motif:HMM:NF013672.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HJO87583.1"
                     /translation="MKIKERIDYSAIVDRKPLTLPDGGRVIVWPVVNLEEWPPELPLP
                     RRILTPPGEGGHVPDIPNWCWSEYGMRIGVWRLMKVLEEFNITPTVSMNGTVPEVYPR
                     VAEAALEAGWEFMGHSYIQKPMYDVDDEREAIFKTMETMQAYCGYKPRGWMGPGLTQT
                     ENTPELLVEAGFEYTADWILDDQPCPINTAKGPLYSVPYTTELNDIPIMLSQAHVSTV
                     LYDRTMDYFETLNEEGADNVRIMTIAVHPYIHGVPHRIKYFRQIFMELSKKPGVVFMT
                     GAEILDWYLAQQ"
     gene            complement(1086..1439)
                     /locus_tag="QF359_11530"
     CDS             complement(1086..1439)
                     /locus_tag="QF359_11530"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF014332.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HJO87584.1"
                     /translation="MIMRSVMAVKLHGICVTQCDLHYSGSITLPPHILNASKLSSGDV
                     VSIYNFNNGARYDTYVIEGDDDHTVGINGPSARLCYEGDRIVVVQYVTTDEQINSQVL
                     FFNEDNQQVEQEAVF"
     gene            complement(1730..2059)
                     /locus_tag="QF359_11535"
     CDS             complement(1730..2059)
                     /locus_tag="QF359_11535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87585.1"
                     /translation="MLRCTQSGATHQLDIFAKWFDKTVFKYICKKPEAGCETAFAGLE
                     WDIENPIHRTSPAKECLIARNTRHNAGRSYGPFSGVYYLILNHVSYDRDLVKPSWSRP
                     EMLDKAR"
     gene            2347..>2738
                     /locus_tag="QF359_11540"
     CDS             2347..>2738
                     /locus_tag="QF359_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO87586.1"
                     /translation="MKPTNTILGEYGTTIFTVMSALAVEHKAINLGQGFPDTDGPADI
                     RAAAERATQEGPNQYPPMMGLPELRQAAAAHNKAFYDLDLDWQTQSMVTSGATEALAA
                     CLFGLVEPGDEVVMIEPLYDCYLPILRRA"
BASE COUNT          703 a          618 c          681 g          736 t
ORIGIN      
        1 atcgcaggag tcatgccagt ttttgatttt taaaatatta tcaatagaat caattactta
       61 gaccataata cagggttgga aatacaccta gttttaatcg gacgtgcaca aaatttaggc
      121 atttgctcaa ttaaccatct gaatcataaa tttctaggcg ttgctaaact cattttggca
      181 ctctaagttt tttaaagacc atttaggggt gctctatgaa aatcaaagaa cgtatcgatt
      241 acagcgcaat cgtcgaccgt aaaccattga ctttgccaga tggcggcagg gtcattgtct
      301 ggccagtcgt taacctcgaa gagtggccgc ccgaacttcc tctgccgcgg cgaattttaa
      361 cgccgcctgg tgaaggcggg catgtgccgg acatccccaa ttggtgctgg tcggaatacg
      421 gtatgcggat tggcgtctgg cgtctgatga aagtgctgga agaattcaat attacgccaa
      481 cggtttcgat gaatggcacc gtgcctgagg tttatccccg ggttgccgaa gccgctctgg
      541 aagccggctg ggagtttatg gggcacagtt acattcaaaa gccgatgtat gacgttgatg
      601 atgaacggga agctattttc aaaaccatgg aaaccatgca ggcttattgc ggttataaac
      661 cacgcggctg gatggggccg gggttgaccc agactgagaa tactccggaa ttgctggttg
      721 aggcaggctt tgaatatacc gctgattgga tattggatga tcaaccgtgt ccgattaata
      781 ccgctaaagg accgctttat tccgtgccct atacgactga gcttaacgac attccgatca
      841 tgctgtcgca ggctcatgta tccaccgtgc tttatgaccg gacgatggat tattttgaaa
      901 cgctcaacga agaaggggcc gacaatgtgc gaattatgac catcgccgtg catccctata
      961 tccacggcgt gccgcatcgg attaaatatt tccgtcagat cttcatggaa ttgtctaaga
     1021 aacccggtgt tgtctttatg accggcgccg agattttgga ttggtatctg gcacagcagt
     1081 aaggcttaaa atactgcttc ctgttcgact tgttgattgt cttcgttgaa gaacaatacc
     1141 tgggaattaa tttgctcatc cgtggtaacg tattgcacga caacaatgcg gtcgccttcg
     1201 tagcacagcc tggcacttgg accattaatg ccgacggtat gatcgtcgtc gccttcaatc
     1261 acataggtgt cgtagcgggc gccattgttg aaattataaa tcgagacaac atcgccggag
     1321 cttagctttg aagcgtttag aatatgcggt ggtagggtga tggagccgga atagtgcaga
     1381 tcgcattggg tgacgcaaat gccatggagc tttacggcca ttactgaacg cataatcatg
     1441 atgttacatt tctcgtttat taaagcttcc tgaacatggg ctgtttgatt acattttaaa
     1501 cctttttgca agcatgattc ttagtcacgt ccgcataatg aactactcgt ttaccggtgc
     1561 agtcgccacg gccggttaaa gttgttgcgt gaccgcccct gtttggctga atacttcctg
     1621 aggaaatcat tcatatcatc gatcttgtct tcatcttcgt cgtcatcttt tcccgggatt
     1681 tggcaagtga gaggcggtag ttgatgtctt tgatatagtg ccgcgtggtt caccgggctt
     1741 tatcaagcat ttcgggacgg ctccaactcg gttttacgag gtcacgatca taactcacat
     1801 gatttaaaat caggtaatag acgccgctaa agggaccata agagcggccg gcgttatgtc
     1861 tcgtattgcg ggcaatcaga cattctttcg ccggtgaggt gcggtggatc ggattctcaa
     1921 tatcccattc cagcccggca aatgccgtct cgcatccggc ctcgggtttt ttacatatat
     1981 atttgaagac ggttttatca aaccacttag caaaaatatc cagctggtgg gttgcgcctg
     2041 attgagtgca gcgcagcaaa tctgatcaga gatagattaa gaaagctctt gaaaatcccc
     2101 ttgctggtat gaggaagtaa taagaaggta taaatagcat tatggcaaca gcacaattcg
     2161 caagacaacc aacccaatga tcacaacaca ccagtgtaaa tcatccctgt caaaggattt
     2221 catcacaatt ctccatccaa tttaacaatc accacttaaa gtgttatggg gggaccagcg
     2281 gcggtttttg tgctagagaa gaaaaaattt gtaaaaaaat aaatggtttt aaaggagtaa
     2341 tggcatttga aaccgaccaa tacgatttta ggcgagtacg gcacgacaat ctttacggtg
     2401 atgtcggcac tggcggtgga acataaagcg attaacctcg gccagggctt tccggatacc
     2461 gatggcccag ctgatattcg agctgccgcc gagcgcgcca cccaagaagg tcccaaccaa
     2521 tacccgccga tgatgggttt gcctgaatta cgccaggccg ccgctgctca caataaggcg
     2581 ttctatgatc tcgatcttga ttggcagacc caatcgatgg tgacctcggg cgccaccgaa
     2641 gcattggcag catgcctgtt tgggctggtt gaaccgggtg atgaagtggt gatgatcgaa
     2701 ccgctttatg attgttattt gcccattttg cgccgggc
//
LOCUS       DASCNL010000877         1529 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001817246, whole genome shotgun sequence.
ACCESSION   DASCNL010000877 DASCNL010000000
VERSION     DASCNL010000877.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001817246"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(250..>1529)
                     /locus_tag="QF359_11545"
     CDS             complement(250..>1529)
                     /locus_tag="QF359_11545"
                     /inference="COORDINATES: protein motif:HMM:NF023222.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HJO87587.1"
                     /translation="KHQDVMTYVEDNGLRVSTSYLRPTKKEHLAQRHKNTRFWSEQVH
                     GMCGRLPDFCAAMTVGYVDLHDELAKLNPDLAKNAINYYEYARDNDLCLSHALHDPCM
                     DKSLSPKQDPDRCVHVVKERDDGVILRGARFNTIGPFCNDILISPTHAFTEDEEEFAI
                     WFMVPVNAPGLKQICREIFSNRDPLDHPMSARFDEIDTLVVLDDVFIPWERIFLYREP
                     LAANRLFRGGVMAWAGDASSALTEVRFETLVIIAKLLAETSGIIDRPHVQQALGEMCT
                     YLTLLRTAIRAGHADCSKSAGGHWQPQLFLDRRSMVTRVSERFCDLVDHIGTSSTIFN
                     HTREDWDNPDVAKYLQTYMRGHNSSAMDRHKITKLAWEMTGDSYGRRQQLYERLHSGD
                     AEMVKAGPGKSFDYGPGLERVSKLLDLEDTTIA"
BASE COUNT          363 a          373 c          397 g          396 t
ORIGIN      
        1 ccagcaattc atcaaaggtg tagttttcgc cgcgataggg atgtgcggca gcgattttat
       61 cgaattccgc gcgttggccc cattcctccg gcggggtgga taacattggg ctatgagagg
      121 tgcccatacc tagtactatt tgcgccatga ttttgcctcc gttcaaatta aatttgagag
      181 aatgaccgtt ccagctagtt cattttgccg gaacggtcgc tctgtaaagt ttttggcaat
      241 taaaccgctt tacgcaatgg tggtatcttc aagatcgaga agtttactaa cccgttcaag
      301 gccaggtccg taatcgaagc ttttgcccgg accggctttg accatttcgg cgtcgccgga
      361 atggaggcgt tcgtagagtt gctgacgccg accatatgaa tcgccagtca tttcccaagc
      421 gagcttggtg attttatgac ggtccatagc agaagaatta tggccccgca tataggtttg
      481 cagatatttt gctacatctg gattgtccca atcttctctg gtgtgattga aaatggtcga
      541 tgacgtgccg atatgatcga ccagatcaca gaatcgttct gagacgcgtg tcaccattga
      601 ccggcggtcg agaaacagtt gtggttgcca gtggccaccc gccgatttgc tgcaatcagc
      661 gtggccggcg cggatcgccg ttctgagcag ggtcagataa gtgcacattt cacccaatgc
      721 ctgctggaca tgtgggcgat ctattatgcc tgaggtttca gccagcaatt tggcaatgat
      781 aaccaatgtt tcgaagcgga cttcggtcaa cgccgatgag gcgtcgccag cccaggccat
      841 tacgccacct cggaacaaac ggtttgccgc caatggttcg cgatagagga aaatacgctc
      901 ccatggaata aacacatcat ccagaaccac caatgtatcg atttcatcga aacgcgccga
      961 catcggatga tccagtggat cacgattgga gaaaatttca cggcatattt gtttcaaccc
     1021 aggtgcattg acgggcacca tgaaccaaat ggcaaattcc tcttcgtctt cggtgaacgc
     1081 gtgggtcggt gagatcaaga tgtcgttgca gaatgggcct atggtattga aacgggcgcc
     1141 gcggagaata acgccgtcat cacgttcttt gacgacatgg acacaccggt ccgggtcctg
     1201 ttttggactt agcgatttat ccatgcaggg atcgtgcaag gcatgggaca ggcagagatc
     1261 attatcacga gcgtattcat aatagttgat cgcgtttttc gccaaatcag gatttagctt
     1321 cgccagttca tcatgaagat caacataacc aaccgtcata gctgcacaga aatctggtag
     1381 ccggccgcac ataccgtgca cttgctcgct ccagaaacgg gtgtttttgt gccgttgggc
     1441 gagatgttct tttttggttg ggcgcaaata agacgtcgac actctcagac cgttgtcctc
     1501 aacataggtc attacgtcct ggtgttttt
//
LOCUS       DASCNL010000878         2265 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001819867, whole genome shotgun sequence.
ACCESSION   DASCNL010000878 DASCNL010000000
VERSION     DASCNL010000878.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001819867"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            135..932
                     /gene="coxB"
                     /locus_tag="QF359_11550"
     CDS             135..932
                     /gene="coxB"
                     /locus_tag="QF359_11550"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HJO87588.1"
                     /translation="MASGANAAEPKPWQMNFQPAATPVMEKITEFHNLLLTVEVGIVI
                     FVLALMLIIIFKFNAKSNPEPSKTTHNTPLEVIWTVIPIVILIIFSVPSMKLLFFMDK
                     AQNPEMTLKIVGHQWYWSYQYPDHGGFEFDSNMIPDEEIKPGQRRLLDVDNQVVLPVN
                     TEVRLLMTSEDVIHNWAIPAFGVKLDTVPGRTNETWVKVTKPGTYYGQCSELCGVNHG
                     FMPVAVKVVSKDEFKQWVTKAKKEFAKVKDAPVKVVEMNTPVQAKVR"
     gene            968..>2265
                     /locus_tag="QF359_11555"
     CDS             968..>2265
                     /locus_tag="QF359_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 1"
                     /protein_id="HJO87589.1"
                     /translation="MSDTAHADAHDRHDHRPTGWRRWVYSTNHKDIGTMYIVMAMIGT
                     IVGTATSVAIRLELHEPGIQFISDFQFYNVLVTAHGFIMVFFVVMPALIAGFGNWFIP
                     LMIGAPDMAFPRMNNISFWLLAAALVMLVIAGLIDGGPGTGWTVYPPLSNADYHPGMA
                     VDFGILSLHLAGASSILGAINFITTIVNMRAPGMTFHRMPLFVWAEFVTAVLLLLAIP
                     VLAGALTMLLTDRNFGTTFFSPAGGGDPLLWQHLFWFFGHPEVYIIIIPAFGVISQIV
                     STFARKPVFGYLGMAYAMAAIGIVGFVVWAHHMYTVGFDVETRAYFTLATMVIAVPTG
                     VKVFSWLATMWGGSIKFDTPMLYAMGFIFLFVVGGVTGVTLANAGSDIAFHDTYFVVA
                     HFHYVLSVAAIFAMYGGFYYWIGKMSGKQYPEGLGRLQFWV"
BASE COUNT          517 a          512 c          578 g          658 t
ORIGIN      
        1 ggaccaatta cagtcttcaa gtaatgcagg gctgataaac gtaaacagga acggtacaga
       61 tgcaaaatag tcgcagaata attctaaggt ataaatcagg agttgcgttt ctgatcactg
      121 cttttgctgc attcatggca agcggtgcca acgccgccga gccaaaaccc tggcagatga
      181 attttcaacc agccgcgacg ccggtgatgg aaaaaattac agaatttcat aatctgctgc
      241 tgacggtaga ggtcgggata gttatttttg ttttggcttt gatgctgatt atcatcttta
      301 agtttaatgc gaagagtaat ccggagccct ctaaaacaac ccacaacacc cctttggaag
      361 ttatttggac ggttataccg atcgttattc tgattatttt ttccgtacct tcgatgaaat
      421 tattattctt tatggacaaa gctcaaaatc cggaaatgac gctcaaaatt gtaggccatc
      481 aatggtattg gtcttatcaa tatcctgatc atggtgggtt tgaatttgat agcaatatga
      541 ttcccgacga agagattaaa ccaggccaac gccgcctgct ggatgtcgat aatcaagttg
      601 tcttgccggt aaataccgaa gttcgcctat tgatgacttc ggaagatgtg atccacaact
      661 gggcaattcc ggcctttggc gtaaaattgg atacggtgcc cgggcgcacc aacgaaactt
      721 gggttaaagt taccaaacca ggtacttact atggacaatg ttctgagctt tgtggcgtta
      781 accacggctt tatgccggtt gcggttaaag ttgtttccaa ggatgagttc aagcaatggg
      841 ttaccaaggc caaaaaggaa tttgccaagg tgaaagatgc gccggtgaag gtggtggaaa
      901 tgaatacgcc agttcaggct aaagttcgct aattcgggtg agattaagga ataagaggta
      961 atttaaaatg tcagatactg cacacgcaga cgcacacgac cgccacgatc atcgcccaac
     1021 cggatggcgg cgttgggttt actcaaccaa tcacaaagat attggcacga tgtacattgt
     1081 catggcgatg attggcacca tcgtcggcac cgctacgtcg gttgccatcc ggcttgaatt
     1141 gcacgagccc ggcattcagt tcatcagtga tttccagttt tataatgtct tggtgacggc
     1201 acacggtttc atcatggtgt tcttcgttgt catgccggct ttaatcgccg gttttggcaa
     1261 ttggttcatc ccactcatga ttggtgcgcc cgatatggct ttcccgcgga tgaacaatat
     1321 cagtttctgg ctgcttgcgg ccgccctggt gatgctggtg atcgctggtc tgatcgatgg
     1381 tggtcccggt actggctgga cagtatatcc gccactctct aatgctgatt accaccccgg
     1441 tatggcggtt gactttggta tcctcagtct ccatctggct ggcgcttcat ctattttggg
     1501 tgcgattaac ttcatcacga caattgtgaa tatgcgcgca cccggcatga ccttccaccg
     1561 gatgccattg tttgtctggg ctgaattcgt gaccgctgtt ctcctgctac tggcgattcc
     1621 ggtattagcc ggtgcgttga cgatgctgct caccgaccgc aactttggca cgaccttctt
     1681 ctcaccagcc ggtggcggtg atccattgct gtggcagcat ctgttttggt tctttggcca
     1741 tcctgaagtt tacattatta ttatcccggc ctttggcgtg attagtcaga ttgtttcgac
     1801 ttttgcaaga aaaccagtat tcggctatct cggtatggcc tatgcaatgg cggcgattgg
     1861 cattgtcggt tttgtggttt gggcgcacca catgtatacg gttggcttcg atgttgaaac
     1921 ccgagcctat ttcactctgg cgacaatggt gattgcagtg ccgaccgggg tgaaggtttt
     1981 cagctggctg gcaacaatgt ggggtggttc aatcaagttt gatacgccaa tgctttatgc
     2041 tatgggcttc attttcttgt ttgtcgttgg tggcgttacc ggcgtaacct tagccaacgc
     2101 gggttcggat atagctttcc acgacaccta tttcgtggtt gctcacttcc attatgtgct
     2161 gtcggttgcg gctattttcg ccatgtatgg cggcttctat tactggattg gtaaaatgtc
     2221 aggcaagcaa tatccggaag gcttaggccg cttgcagttc tgggt
//
LOCUS       DASCNL010000879         1506 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001820327, whole genome shotgun sequence.
ACCESSION   DASCNL010000879 DASCNL010000000
VERSION     DASCNL010000879.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001820327"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..836)
                     /locus_tag="QF359_11560"
     CDS             complement(<1..836)
                     /locus_tag="QF359_11560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HJO87590.1"
                     /translation="MRGLPLDLGTIHFVGIGGIGMSGIAEVLHNLGYAVQGSDMAEGT
                     NVVRLRDLGIDVKVGHAEKNLGKAEVVVISSAVKAGNPELEVARQRLMPVVRRAEMLA
                     ELMRLKWSIAVGGTHGKTTTTSLVAALLEAAKMDPTVINGGIINAWGTNARLGDGDWL
                     VAEADESDGTFVKLPSTIAVVTNIDSEHMDHYGSFDALRDAFVTFVEQIPFYGFAALC
                     IDDAEVQALIPRVLDRKIITYGESPQADIRIVNIEASRDGSSFDIVIADRKSGEERII
                     EKL"
     gene            complement(833..>1506)
                     /locus_tag="QF359_11565"
     CDS             complement(833..>1506)
                     /locus_tag="QF359_11565"
                     /inference="COORDINATES: protein motif:HMM:NF016027.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJO87591.1"
                     /translation="IIVTGMPVRLAVTIVRDRAYPSISREGDINLAVFGGSQGAHIFS
                     VVVPDAMKRLDESLRRRIKITQQSRQEDIDLANSVYRTIGIEAELSTFFNDVPDRIAD
                     AHLVICRSGASSIAELTTIGRPAILVPYRHAVDDHQSRNAYAVDEVGGGWLIPEKAFT
                     GVVLAERLAALFAIPRILENAATAAKSAGVPDAAARLADMVVGLMSNGNGKSDPDTTN
                     QRAAA"
BASE COUNT          388 a          412 c          354 g          352 t
ORIGIN      
        1 agtttttcga ttatgcgctc ttcaccagat ttacgatcgg caatgacgat atcaaagcta
       61 gaaccatccc tggacgcctc aatattaacg atgcgaatat cggcctgggg tgattcacca
      121 taggtgatga ttttacggtc taagacccgg gggatcaatg cttgcacttc ggcatcgtca
      181 atacagagag cagcaaaacc ataaaatggg atttgttcga caaaggtgac aaaagcatcg
      241 cgcaaggcat cgaacgagcc gtaatgatcc atatgttcgc tgtcaatatt ggtaacaacg
      301 gcgatggtcg aaggtaattt tacgaaagta ccatctgatt catcagcctc cgcgaccagc
      361 caatcaccat caccgagccg cgcattggtt ccccaggcat taataatacc gccattgata
      421 acggttggat ccattttggc ggcttctaaa agcgctgcta ccaacgacgt tgtagtggtt
      481 tttccatgag taccgccaac ggcgatggac catttaagac gcatgagctc agcaagcatc
      541 tcggcccggc gcactaccgg cattaggcgc tggcgggcga cctccaattc cgggtttccg
      601 gctttaaccg cagaggaaat taccaccact tccgccttac ccaaattttt ctcggcgtgg
      661 ccaactttaa catcaatgcc gagatctctt aagcggacca cattggtgcc ttccgccata
      721 tcactgccct gcaccgcgta accgaggtta tgcaacactt cggcaatacc gctcatgcca
      781 ataccgccga tgccgacgaa atgaatggta ccgagatcaa gtggcagtcc tctcatgccg
      841 cggccctttg gttagttgta tcgggatcac tttttccgtt accattggac atcaggccga
      901 caaccatatc ggcaagtctc gcagcagcgt ctggcacgcc ggctgatttt gccgctgttg
      961 cggcgttctc aagtatgcgc gggatggcaa ataaagctgc taaacgctcc gctagaacga
     1021 caccagtaaa ggctttttcg gggatgagcc aaccgccgcc gacctcatca actgcatagg
     1081 catttcttga ttgatgatca tccaccgcat gacggtaggg cactaaaatc gccggacggc
     1141 cgatcgtcgt tagctctgca attgaagatg cgcctgaccg acaaatcacc agatgagcat
     1201 cagcaatacg atccggcacg tcattaaaga aagtagaaag ctccgcttca ataccaatgg
     1261 tgcgataaac cgaattagca agatctatgt cttcctggcg gctctgttgg gtaattttga
     1321 tccgacgacg gaggctttca tcaagccgct tcatggcatc cggtacgacc acactaaata
     1381 tatgagcgcc ttgactgcca ccaaagactg ctaaatttat atcgccctct ctgctgatag
     1441 acggataagc tcgatctctg acaatcgtga ccgctagccg cacgggcata ccagtgacga
     1501 ttatat
//
LOCUS       DASCNL010000880         1738 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001821345, whole genome shotgun sequence.
ACCESSION   DASCNL010000880 DASCNL010000000
VERSION     DASCNL010000880.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001821345"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..540)
                     /locus_tag="QF359_11570"
     CDS             complement(<1..540)
                     /locus_tag="QF359_11570"
                     /inference="COORDINATES: protein motif:HMM:NF013507.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HJO87592.1"
                     /translation="MGIIKTIGIVGPALIAASTVQAGGWNEKAPLLEPLSETAVAQSG
                     HMIYVFGGYPRLRITVDTAQAYNAKTDKWRYLPPIPVKTNHAMAAAVDEKVYVIGGQA
                     TAGGRRVNGRFERQPPGFMDSVFEYDPATNKWVQKASMPSKRSGGVAVVVGGKIYVAG
                     GRTQETGDNFAAFDPKANRW"
     gene            complement(597..761)
                     /locus_tag="QF359_11575"
     CDS             complement(597..761)
                     /locus_tag="QF359_11575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87593.1"
                     /translation="MQFFLKYIFGHGPATCTIPATSNPDHMADNLVAGEGRLPDAAEL
                     KKMADYFDAL"
     gene            1012..>1738
                     /locus_tag="QF359_11580"
     CDS             1012..>1738
                     /locus_tag="QF359_11580"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO87594.1"
                     /translation="MAYDKVNEVSADVLIVGGGTAGCHAAINARKKGAKVLVIDKANV
                     LTSGCGGSGVDHWYNACTNPASGITPEDQVDEFQSCRKGIATSEYGSRASHYITARES
                     WDALLDIEEWGIDIRDVNDEFVGADFRDEETKLMFAYDYDSRTVVRVQGAYIKKVMHD
                     EMRRLDVQIQNRVMITSLLTEGGKIGGRVIGATGFHIRTGEFYIFKAKSTIVCTGPAT
                     RLWVFSTELIGANSIHDDPNDVGD"
BASE COUNT          430 a          419 c          445 g          444 t
ORIGIN      
        1 ccacctgttg gctttcggat caaaggcagc gaaattgtca ccggtttctt gagtgcgccc
       61 gccagcgaca tagatcttgc caccaacaac aacggcgaca ccaccgcttc gttttgacgg
      121 cattgacgct ttctggaccc atttgttggt cgctggatca tattcgaaaa cgctgtccat
      181 gaagccgggt ggttgtcgtt caaatctgcc atttacgcgc cgtccacctg ccgtggcttg
      241 accaccaatg acatagactt tttcgtcaac cgctgccgcc atagcgtgat tagttttgac
      301 cgggattggc ggcaagtagc gccatttatc ggttttggca ttataagcct gggcggtatc
      361 tactgttatc cgcaggcgcg gatagccgcc aaaaacatag atcatatggc cgctttgcgc
      421 gaccgcggtt tcggaaagcg gctccaacag cggcgctttt tcattccagc cccccgcctg
      481 taccgtactg gcggcaatta aggcaggtcc aacgatacca attgttttaa taatccccat
      541 ttttacctcc tcgcatttat ttctattcaa cgaattaagt agtaatttcc gtcgctctac
      601 agcgcgtcga aataatctgc catttttttg agctctgcgg catcaggcag gcggccttca
      661 ccggcaacaa gattgtccgc catgtggtcc gggttgctgg tggctgggat ggtgcaagtt
      721 gccggcccgt gtccaaagat atatttaagg aaaaactgca ctcaggatgt gcagccgaaa
      781 tcctccgccc agtctggcat cggtgagcgt ttaaacttgg caaaaacata actaaataca
      841 cggcataagc acgcattttc taagtagatt taaattcaat ttaaggcttt ttatatttga
      901 tttaggacaa tgcatgatat gctataacgg cacattctaa gtaaataaaa aaaataaatg
      961 gggaatccga atgacgatct atgaagctcc gttaaacgag aatacaccgc cgtggcctac
     1021 gacaaggtca atgaagtgtc cgccgatgta ctgattgtcg gcggtggcac cgctggctgt
     1081 catgcagcga tcaatgcgcg caaaaaaggt gccaaggttc tggtgattga taaagccaac
     1141 gttttgacta gtggttgtgg ggggtccggt gtggatcact ggtacaacgc ctgcaccaat
     1201 ccagccagtg gcatcacgcc agaagatcaa gttgatgaat ttcaaagttg ccgcaagggt
     1261 atcgccacca gtgaatatgg cagccgcgcc tcgcattata ttaccgctcg ggaaagctgg
     1321 gatgcgctcc tggatattga agagtggggg attgatattc gcgatgtaaa tgacgaattt
     1381 gtcggcgccg atttccgcga cgaagaaacc aagctaatgt ttgcctatga ttatgattcc
     1441 cgcaccgttg tgcgcgtgca gggggcctat atcaaaaagg tgatgcatga tgaaatgcgc
     1501 cggcttgatg tgcaaattca gaaccgggtg atgatcacca gcctgttgac cgaaggcggc
     1561 aagattggtg gacgggtgat tggcgccacc ggttttcata tcaggaccgg tgagttttat
     1621 atttttaaag ccaaatcgac aattgtctgc accggaccgg caacccggct atgggtattt
     1681 tcgaccgaac ttattggtgc taattcaatc cacgatgatc ccaatgatgt cggtgatg
//
LOCUS       DASCNL010000881         1099 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001821414, whole genome shotgun sequence.
ACCESSION   DASCNL010000881 DASCNL010000000
VERSION     DASCNL010000881.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1099)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1099)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001821414"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            150..>1099
                     /locus_tag="QF359_11585"
     CDS             150..>1099
                     /locus_tag="QF359_11585"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO87595.1"
                     /translation="MAETASNAVSGEGISQEDIQKKIEEVEYTGRQTGPTLGVIIGII
                     GAAWSLFQLWIASPFPFLLDFGIIISVSARGIHLGFGLLMVFLMFPAAKSMAHKRISP
                     VDIGLALLGCFAALWVFIDQEGITVRLGQLLTIDLFGSKFPFEAVLGTCGILLLLEAT
                     RRAIGVPLVIVASIFLLYSIFGQAMPEIISHRGVSVTRLIGYHWFGGEAIFGIPIDVS
                     VSFVFLFVLFGALLDRAGAGKYFLDLAFAMVGKYRGGPAKAAILASGMTGLISGSSIA
                     NVVTTGVFTIPVMRKTGFPAIKAGAIEVAASTNGQIMPPI"
BASE COUNT          217 a          252 c          288 g          342 t
ORIGIN      
        1 caccactcca taaaggtgcg gcgaaatatt acaaagaaaa aggctggatg taggtcttag
       61 caatattgaa agtcggcttc ggggagttcc ccgggccggc tttttaactt gggtaggttg
      121 ttaaaactat tttccaataa gggcgcggta tggccgagac ggcatccaat gcagtttccg
      181 gtgaaggtat ttcgcaggaa gacattcaga aaaaaataga ggaagttgaa tataccggtc
      241 gccagaccgg gccgactttg ggcgtgatta tcggcatcat tggtgctgcc tggtcgctgt
      301 ttcaattgtg gatcgcatca ccgtttccgt tcctattaga ttttggcatc atcatttccg
      361 tctcggctcg tggtatccat ctcggctttg gcttactgat ggtattttta atgttccccg
      421 ccgccaaatc gatggctcat aaacgtattt ccccagttga tatcggcttg gctttattag
      481 gctgttttgc cgctttgtgg gtgtttatcg accaggaagg catcaccgtt cgtcttggtc
      541 agttgttgac gattgatctt ttcggttcaa aattcccatt tgaagctgtt cttggtactt
      601 gcggtatatt gctgctgctt gaagcaacgc gccgggccat tggtgtgccg ctggtcatcg
      661 tggcctcaat ctttttgctt tattcgatct ttggccaagc tatgccggag attatttctc
      721 accgtggcgt ttcggttacc agattgatcg gttaccattg gtttggtggc gaggcgatct
      781 ttggcattcc aattgatgtt tcggtcagct ttgttttctt atttgtgttg tttggcgcgc
      841 tgctggatcg cgccggcgca ggaaaatatt ttcttgatct cgcttttgcc atggtcggta
      901 aatatcgtgg tggtccggct aaagcagcca ttctggcatc cggtatgacc ggtttaatct
      961 caggctcctc aatcgccaac gtcgtgacaa ccggtgtgtt taccattccg gtgatgcgta
     1021 aaaccggctt tccagcgatc aaagcgggcg ccattgaagt cgccgcttcg accaatggtc
     1081 agatcatgcc gccgatcat
//
LOCUS       DASCNL010000882         3086 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001823918, whole genome shotgun sequence.
ACCESSION   DASCNL010000882 DASCNL010000000
VERSION     DASCNL010000882.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3086)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3086)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3086
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001823918"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            56..958
                     /locus_tag="QF359_11590"
     CDS             56..958
                     /locus_tag="QF359_11590"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HJO87596.1"
                     /translation="MSDAIKELVPDGASIVLGAALENAIPFAATHELIRQGKCDLNVV
                     APISDISTDMMIGTGCVAEVTGAWVGNVSGGMGHNFRRATEHGEPHPIKVHDYSNFTI
                     GMAFFAGAYGLPYVPVKSILGSDIIKSNPQIKLAENPFVDEPDPVALVPALKPDVAFL
                     VVQRADRAGNSHIWGSTGLTQEASIASEKIIVLADEIVEPEVIASDPSRVLIPGFGVN
                     AVCHIPAASHPSPLIGRWKRDNAFFHHYHQETREPDGFKRWVGEWVRDLPDHDAYRTK
                     LGGELEELRVEGEAFSAPANYATD"
     gene            973..1734
                     /locus_tag="QF359_11595"
     CDS             973..1734
                     /locus_tag="QF359_11595"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HJO87597.1"
                     /translation="MHEYSTQELMIIAAARQINDGERIFVGMRLPITAYGVARLTHAP
                     NAVGLFESGVARYEPAEDMLYTMCDGPNQLGAAWTTGLIQIMGLLSGGRVHAGFIGGA
                     EIDRFANINTSYIGDFENPTTKLPGSGGAPDIAAMAERLIVIINHQKHRLVEKVDFIT
                     SPGYLTGGDARKKAGLPGGGPSVVITDRAILRPHGSENELHLASVHPGHTVEEVIENT
                     SWELKSTPDLGDTPAPTKDELDALHRIDKEGFWRS"
     gene            complement(1758..>3086)
                     /locus_tag="QF359_11600"
     CDS             complement(1758..>3086)
                     /locus_tag="QF359_11600"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO87598.1"
                     /translation="NYSILNPMMSRLPDGERQALQSERLVTMVNYVYDNAPFWRAKFD
                     AAGVTPGDIKGIEDLPKIPFCTKAELLADQEAHPPYGAYTCTEQRQWARLITTSGTTG
                     QPLRRVFSQRDWDYILDRFQRAPHMGPGDISIILGPIDGLMGPTAAYESGIRMGAIMV
                     LAGMYDSKSKIKLIQDLKPVTISSTASYLLRLLEVAEKMGVDARQLGLRGIASVGEPG
                     AAIPATRKRLAEGWNANVIDGFGMTELFPLGGNCPGNTALHIAADMAITEIIDPETGE
                     QLPPGEEGEVVFTNLVGDTQPLLRYRSRDISRITAGEPCPACGHTGPRLEGSIIGRVD
                     DMIWFRGANIFPSAIEEAVRSFDELSHEYQIVVDGDGTLPTMTINLEACNGISGKVAA
                     DLQVRAAAAIKSAIRVNAEVSLVEAGSLPRDDDGNKIRRVIDNRTDSDRG"
BASE COUNT          706 a          805 c          828 g          747 t
ORIGIN      
        1 cgaaaacaga agtcacctgg gagagtgaat aattaacagt gataaattat gcagtatttc
       61 ggatgcgatt aaagaattag tgccggatgg tgcaagcatc gtactcggtg cggcgctgga
      121 aaatgccatc ccatttgcgg ctactcatga gctgatccgt caaggcaagt gcgatctcaa
      181 tgttgtcgcg ccaatctccg atatttcaac cgatatgatg atcggcacag gttgtgtggc
      241 cgaagttacc ggtgcctggg ttggtaatgt gtcaggcggt atggggcata atttccgccg
      301 cgctaccgag catggagaac ctcatccgat caaagtacat gactattcaa atttcactat
      361 tggcatggcc ttttttgccg gcgcctatgg gttgccttat gtgccagtta aatccattct
      421 tggttctgat attatcaagt ccaacccgca aataaaattg gcggaaaatc cgtttgttga
      481 tgagccggac cctgttgcat tggtgccggc gctgaaaccg gatgttgcct ttttggttgt
      541 ccagcgcgct gatcgggccg gcaattccca tatttggggg tccaccggtc taacccagga
      601 agcctcgatc gcatctgaga aaatcattgt gttggccgat gaaattgttg aaccagaagt
      661 tattgcctcc gatcccagcc gggtcttgat tccaggcttt ggcgtcaatg ctgtttgcca
      721 tattccggcg gcgagccatc catcgccttt gattggcagg tggaaaaggg acaatgcctt
      781 ttttcatcac taccatcaag aaacccgcga gcccgatggc ttcaaacgct gggttggtga
      841 atgggtgcgc gatctgccgg atcatgatgc ctatcgcacc aaactcggcg gcgaattgga
      901 agaacttcgt gttgaaggcg aagctttttc ggcgcccgcc aactatgcga cggattgagg
      961 ggagagagca tcatgcatga atactcgacc caggaactta tgatcattgc ggcagcacgc
     1021 cagatcaatg atggtgagcg gatttttgtc ggtatgcggc tgccgatcac ggcttatggt
     1081 gttgcccgcc taacccatgc accaaatgcg gttgggttgt ttgaaagcgg agtcgcacgc
     1141 tatgagccgg ccgaggatat gctctacacc atgtgtgatg gccccaacca attgggcgct
     1201 gcctggacca ccgggctaat ccagatcatg ggattgctaa gtggtgggcg cgtgcatgca
     1261 ggttttattg gcggtgccga gattgaccgc ttcgccaata ttaacacatc ttatattggt
     1321 gactttgaga atccgacgac caaattgccg ggctcgggtg gggcccctga tatcgcggcg
     1381 atggctgagc gtctcattgt tatcattaac catcaaaaac accggctggt tgagaaagta
     1441 gattttatta cttcgccagg atatttgacc ggaggcgacg cccgcaaaaa agccggcttg
     1501 cctggtggag gcccatcagt ggttattacg gatagggcga tcctgagacc gcatggttct
     1561 gaaaatgaac ttcatctggc atcggtccat cccggccata cggtcgagga agtcatcgaa
     1621 aacaccagct gggaattgaa aagcacaccc gatctcgggg ataccccggc gccaaccaaa
     1681 gatgaactgg acgcgttgca ccgcatcgac aaagaaggtt tctggcggag ttaaggggag
     1741 agatttttcc cctatcttta tcccctatct gaatctgtcc ggttatctat cacccggcga
     1801 attttgttgc cgtcatcatc acggggcagg gagccggcct ccaccagact aacttcggcg
     1861 ttgacgcgaa tggcgctttt gatcgccgct gctgccctta cttgaagatc ggcagcaacc
     1921 ttcccggaga tgccattgca ggcttccaga ttaattgtca tcgttggcaa ggtgccgtca
     1981 ccatcgacaa cgatctgata ttcatggctg agttcgtcga aactgcgaac cgcctcctcg
     2041 atggctgagg ggaaaatatt ggcaccccga aaccaaatca tgtcatctac ccggccgatg
     2101 atggagcctt ccagccgtgg acccgtgtga ccgcaagctg ggcagggctc tcctgcggta
     2161 atcctggaaa tgtcacggct ccggtagcgc agcaaaggtt gggtatcgcc gaccaaattt
     2221 gtaaagacaa cttcaccttc ctcacctggg ggcaattgtt cgccggtttc ggggtcaatg
     2281 atctcagtga tcgccatatc ggcggcaata tgaagcgctg tattgcccgg gcaattaccg
     2341 ccaagtggaa acagctcagt catgccaaaa ccgtcaataa cattggcatt ccagccttct
     2401 gcaaggcgtt ttcgggtagc cggaatggca gcgcctggtt cacccaccga ggcgatgccg
     2461 cgcaagccta attgccgggc atctacgccc attttttcag ccacttccag taaacgcagc
     2521 aagtaagacg ccgtgctgct gatggtgacc ggtttcaaat cctggattag cttaatcttg
     2581 gactttgaat cgtacatccc ggcgagcacc attatcgcac ccattcgtat accgctctca
     2641 taagccgcgg tcggtcccat caggccatca atcggcccca atatgattga tatatcaccg
     2701 ggccccatat gcggcgcgcg ttgaaagcgg tcgagaatat aatcccaatc acgttgcgaa
     2761 aatacccggc gtaatggttg tcccgtggtt cctgatgtcg ttatcaaccg agcccattgc
     2821 ctctgctcgg tgcaggtata ggcaccataa ggtgggtgcg cctcctgatc ggccagcaat
     2881 tctgccttgg tgcaaaaggg gatttttggc agatcctcaa tacctttaat gtctccaggt
     2941 gttacgcccg cagcgtcgaa cttggcccgc caaaacggcg cattgtcata aacgtagttg
     3001 accatggtga cgaggcgttc actttgcaga gcctggcgct caccatccgg tagccgactc
     3061 atcatcggat taagtattga gtagtt
//
LOCUS       DASCNL010000883         3221 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001824812, whole genome shotgun sequence.
ACCESSION   DASCNL010000883 DASCNL010000000
VERSION     DASCNL010000883.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3221)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3221)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3221
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001824812"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..992
                     /locus_tag="QF359_11605"
     CDS             <1..992
                     /locus_tag="QF359_11605"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HJO87599.1"
                     /translation="ELREAICAKFKHENGLKYTPAQIQVASGGKQNIYNAVMATVEEG
                     DEVIIPAPYWVSYPDIVLLAEGTPVIVQCAQENNFKMTGEQLGEAITPKTKWLILNSP
                     SNPTGAAYTRDELKALTDVLLRHSHVWVMTDDMYEHIIYDDFEFTTLAQIEPELYDRT
                     LTLNGVSKAYAMTGWRIGYAAGPEELIKAMNKVQSQSTSHATSISQAAAVEALNGPQD
                     FIAANNEVFKERRDLVVSMLNQADGIDCLTPEGAFYVYPSCAGMIGKTTPDGKVLETD
                     LDVATYLLEAEGVAVVFGGAFGLSPYFRVSYATATELLIEACERIQRACGNLK"
     gene            1154..3178
                     /locus_tag="QF359_11610"
     CDS             1154..3178
                     /locus_tag="QF359_11610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HJO87600.1"
                     /translation="MVSKAPSAPRCAAIVGSYLSGKTTLFESILHTCGATNRRGSVSD
                     GNTVGDSSPEARAREMSVEMNVATVDYLGDEWTFIDCPGSVELQQDTIGAMMVADAAI
                     VVCEPGQERALAVTRLMKELDALGVPYLIYINKMDLPEAHVKNTLEALQGMTERPLIL
                     REVPIREDNLVTGFIDLVSERAYQWEDGAPSKLIEVPDSANGRTEEERTQMLESLADF
                     NDDLLEQLLEDVIPETDEVYQNLTKDLQESAIVPVFFGSAEHENGVVRLLKALRHETP
                     EYTVSLDRLGLDADGEAVAQVFKTQNGAQSGKLSLARIWRGEFTDGLRVNGTRVSGIF
                     KMLGAQQNKESKAAAGQVVALGRLDGVQTSDTLSESGKLEGSEWPPFLTPVYALAIHA
                     GRRDDEVKMATAMNKIIEEDPSLSYGPNVDTGEHLLRGQGETHLRIVLDRLKNRNKLE
                     VESQIPQVAYKESIRDKVSQHARHKKQSGGHGQFGDVHVDIKPLPRGSGFQFTDSVKG
                     GVVPKNYIPAVEHGVKEYLARGPLGFPVVDISVELTDGQHHAVDSSDQAFRTAGSLAM
                     REGMPKCKPVLLEPIFQINVSAPQEFTSKVQRLISGRRGQILGFEPKLGWKGWDEVSA
                     HLPESETLDLINELRSLTQGTASFAWEFDRLQEFTGKEADQVIAARGAAA"
BASE COUNT          793 a          790 c          889 g          749 t
ORIGIN      
        1 tggagttgcg cgaagctatt tgtgccaaat tcaagcacga aaacggcctc aaatacacac
       61 cagcgcaaat tcaagtagcg agcggtggca agcaaaacat ttacaatgcg gtgatggcga
      121 cagttgaaga aggtgatgag gtcatcattc cggcacctta ttgggtgtcc tatccggata
      181 tcgtcctgct cgctgaaggt actccggtca ttgttcaatg tgctcaggaa aataatttta
      241 aaatgacggg tgagcagttg ggggaggcca ttacaccaaa aactaaatgg ctgattttaa
      301 actcgccttc caacccgacg ggtgccgcct atacgcggga tgaattgaag gcgttgactg
      361 atgtattgct gcgccattcc catgtttggg tgatgaccga tgacatgtat gaacatatta
      421 tctacgatga ttttgagttc accacgctgg cccaaattga acctgagctc tatgaccgga
      481 cgttgaccct caacggtgtg tccaaagcct atgctatgac cggttggcgc atcggctatg
      541 cggctggccc ggaagagctg atcaaagcga tgaacaaagt gcaatcgcaa agcacctcac
      601 atgccacttc aatcagccaa gccgccgccg tcgaagcgct taatggaccg caggatttta
      661 tcgctgccaa taatgaggtg ttcaaagaac gccgagatct ggtggtctcc atgctcaatc
      721 aggccgacgg tatcgattgc ctgaccccgg aaggtgcgtt ctatgtctat ccaagctgcg
      781 ccggcatgat cggtaaaacg acgccagacg gcaaagttct ggaaactgat ttggatgtcg
      841 caacctattt gctggaagcc gaaggggttg ccgtggtctt cggtggggcc tttggcttgt
      901 cgccctattt cagggtctcc tacgccactg ccactgagct tttgatcgag gcttgcgaac
      961 gtattcaacg cgcttgtggg aatttaaagt aaaatctcca aattcttgct aaagaatctc
     1021 agattctgct tggattcaaa atgtaggaaa gctaaccttt aaatgaacgg ggcggttgct
     1081 cccggttaag tgttggtatt cacctgggtt tccgccctga ataatagatc aaccaaaaac
     1141 gggaggaact cttatggtta gcaaagcccc atctgcgccc cggtgcgcag ctatcgtcgg
     1201 ctcttacctt agcggcaaaa caactctatt cgaaagtata ctccatacct gcggtgcgac
     1261 gaaccgccgg ggcagcgtgt cagatggcaa taccgtcggt gattcatcac cggaagcccg
     1321 cgcccgcgag atgagcgtcg aaatgaatgt ggcgacggtt gattaccttg gtgatgaatg
     1381 gacttttatc gactgccccg gcagcgttga attacagcaa gataccatag gcgcaatgat
     1441 ggtcgccgat gcggcgatcg tggtctgtga accgggccag gaacgcgccc ttgccgtgac
     1501 ccgcctgatg aaagagttag atgctctcgg cgtgccgtat ctgatttata tcaacaaaat
     1561 ggatttgccc gaagctcatg tgaaaaacac gttggaagct ctgcagggta tgacggaacg
     1621 ccccctgatc ttgcgtgaag tgccgatccg cgaagacaac ctcgtcactg gttttattga
     1681 tctcgtcagc gaacgcgcct atcaatggga agacggtgcg ccgtcgaaat tgatcgaagt
     1741 accggattcg gccaatggcc gcaccgagga agagcgcacc caaatgctgg aatcactagc
     1801 tgattttaat gacgatttgc tcgaacagct actggaagat gtcattcctg aaaccgatga
     1861 agtttatcaa aacctgacca aagatttgca ggaaagcgct attgtgccgg tgttctttgg
     1921 ctcggctgaa catgagaacg gtgttgtgcg gctattgaag gcgctgcgcc atgaaacacc
     1981 ggaatatacc gtgagtttag atcgattagg cttggacgca gacggcgaag ccgtcgccca
     2041 ggtttttaag acccaaaatg gcgctcagtc tggtaagctt tcattagcgc gaatttggcg
     2101 cggcgagttt actgatggac tgcgtgtgaa tggcacgcgg gtcagcggca tcttcaaaat
     2161 gctcggcgcc cagcaaaata aggaaagtaa agctgctgcc ggacaagttg tcgcgctcgg
     2221 ccgcttggat ggcgtgcaga ccagtgacac actatcggaa tcaggcaagt tggagggatc
     2281 agagtggccg cctttcctaa cgccggttta tgccctggcg atccatgccg gcaggcgcga
     2341 tgatgaagtt aaaatggcaa ccgcgatgaa caaaattatc gaggaagatc cgtcactatc
     2401 ttacggaccg aatgtcgata ctggcgagca tctcttgcgc ggtcagggtg agacccatct
     2461 gcgcattgtt ttggaccgtt tgaaaaaccg taacaaactt gaggtcgaat cgcagattcc
     2521 acaggttgcc tataaagaat cgatccgcga taaagtctcc caacatgccc gacacaaaaa
     2581 gcaatcgggc ggccacggcc agttcggtga tgttcatgtt gatatcaaac cattaccacg
     2641 cggctcgggg tttcagttta ccgattccgt caagggcggg gtggtgccga aaaactacat
     2701 tccggccgtt gagcatggcg tgaaggaata tctcgcccgt ggaccgctcg gttttccggt
     2761 tgtcgatatc tcggttgagt tgaccgatgg ccagcatcac gcggtcgaca gctcggacca
     2821 ggcgttcagg accgccggct ctttggcgat gcgggagggc atgccgaaat gcaaaccggt
     2881 cctgcttgag ccaatatttc agatcaatgt gtcagcaccg caggagttta cctccaaggt
     2941 gcagcgcttg atcagtggcc ggcgtggtca aattcttgga tttgagccaa agctcggctg
     3001 gaaaggctgg gatgaagtgt cggcacatct gccggaatca gaaaccctag atctgattaa
     3061 cgagttgcgc tccttaactc aaggcacagc atcttttgcc tgggagtttg accggttgca
     3121 ggagtttacc ggcaaagaag cggatcaggt aatcgccgct cgcggggctg ctgcttaaca
     3181 ctcgcttttc ttgaggaata ttaaagctag tttcgaagat t
//
LOCUS       DASCNL010000884         4140 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001826245, whole genome shotgun sequence.
ACCESSION   DASCNL010000884 DASCNL010000000
VERSION     DASCNL010000884.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4140)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4140)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4140
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001826245"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            253..1584
                     /locus_tag="QF359_11615"
     CDS             253..1584
                     /locus_tag="QF359_11615"
                     /inference="COORDINATES: protein motif:HMM:NF024118.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJO87601.1"
                     /translation="MKRTALISILIAATTLAHSSITMSQGKELSNRAKAMDTNKDGLV
                     QEGEAQGMLKSNFKDMDCDKNGGLDGAEISGFFTGAECPKAAAPKKKSKFPPLSDRAK
                     AMDTNKDGLVQKNEAKAILFSNFKAMDCDKNKGLDGAEISGFFTGAGCPKSAIEEPLF
                     RVTLLGTGAPPPRVKRFGPSTLIETDAGGFVFDAGRGATIRIFQLGGEHPLRARPYFA
                     RADKLFLTHLHSDHVEGIPDLWLSGRMFGRLTPFQVWGPPGTKSLMTNLEAAYAEDIR
                     VRHKAKKEANKIIARDVYPGEVYNKNGVSIRAFMVDHQPFKYAFGFRIDYAGRAVVLS
                     GDTKYCQCVIDAAKGADLVIHEVAAVSEQFKKQIPFFATFEDNHVTPERVGKVFAAVK
                     PKLGVFTHLVTYGVSPDKIIERARKTYSGKMVVGKDLMRISVGKVVRVLDK"
     gene            complement(1624..1806)
                     /locus_tag="QF359_11620"
                     /pseudo
     CDS             complement(1624..1806)
                     /locus_tag="QF359_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038789.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            1864..1950
                     /locus_tag="QF359_11625"
     CDS             1864..1950
                     /locus_tag="QF359_11625"
                     /inference="COORDINATES: protein motif:HMM:NF017050.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87602.1"
                     /translation="MPTLVSGNTNAPTMMVADRAVDFILQNA"
     gene            2207..2536
                     /gene="erpA"
                     /locus_tag="QF359_11630"
     CDS             2207..2536
                     /gene="erpA"
                     /locus_tag="QF359_11630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HJO87603.1"
                     /translation="MNALSITESAANRVTDLIASDGNDQLMLRVTVSAGGCSGFSYGF
                     DLDANKTAEDQIFQDHGVKIIIDDMSLEILGNSEVDFVDDLMGAAFRLNIPSATSSCG
                     CGVSFAV"
     gene            2612..3385
                     /gene="xth"
                     /locus_tag="QF359_11635"
     CDS             2612..3385
                     /gene="xth"
                     /locus_tag="QF359_11635"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HJO87604.1"
                     /translation="MVKIATWNVNSVKARLAHLLRWLDDFSPDVVLLQELKCVAEAFP
                     HLEVEDKGYNIAVAGQKTYNGVAILSKTPIDIELTELPGDPSDEQARYIEGFTGGVRV
                     AAIYLPNGNPVDTEKYPYKLGFMARLHDHAKELLATEDVFVLGGDYNVIPEDADVHDP
                     ESWRGDALFRPETHAAWRKLIYLGLTDAFRVFNPEAGRYSYWDYRAGAWNKDNGIRID
                     HLLLSPQATDLLTASGVDRTPRGWEKPSDHTPVWCELDL"
     gene            3560..>4140
                     /locus_tag="QF359_11640"
     CDS             3560..>4140
                     /locus_tag="QF359_11640"
                     /inference="COORDINATES: protein motif:HMM:NF024966.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJO87605.1"
                     /translation="MDEARVNAAADRQEINELLMNWGQARDRAEWENLRNCFQPDGTI
                     DIAWISGPASEFVDKSAERLDEFKQGEYSKHVMSPGRIQLNGNRAFSQCHVNHISRVI
                     VDGHEFDWEFWGQFFDLIEKREDGVWRLFNRTMVYEKDRLDAVHPDALPEGYFDDTDF
                     AEFLPEVRFLSWRLKKNDIPTAKNLLIINSPEES"
BASE COUNT         1098 a          951 c         1028 g         1063 t
ORIGIN      
        1 gcatgtttca atagccaaat tgtgctaacc tctggtcggg ccatttgtga cacagtaaga
       61 ctagggctct acaaaacgat caataatacg ggtaacgtgg tattttcccg tggcaaggta
      121 tcgccgtcag agacaatcct tgacagtgac cttatgcgtg acgctaacta atcgccaaga
      181 ccaaactacc atactaaagg aaagatctta gaagcgttga aaaccgacgc cgaaaacagg
      241 gaggtatcaa tcatgaaacg cacagcactt atcagcatac tcatcgcggc caccaccttg
      301 gcccattcgt caattacaat gagccagggg aaagaactct caaatcgggc aaaagccatg
      361 gacaccaata aggatgggtt agttcaggag ggcgaagccc agggcatgtt aaaatccaat
      421 ttcaaagata tggactgtga caagaatggt ggattggacg gcgctgaaat aagcggcttc
      481 tttacgggag cagagtgtcc taaagctgct gcacctaaaa agaaatcaaa atttcctcct
      541 ctttcggacc gggcgaaagc catggatacc aataaggatg gactggttca gaagaatgaa
      601 gccaaagcca tcctgttttc caattttaag gccatggact gtgataagaa caaaggactg
      661 gatggagccg agatcagcgg cttctttact ggagccggat gtcctaaatc ggcaattgag
      721 gaaccactgt tccgggtcac attacttggc accggagcgc cacccccgag agtaaagcgc
      781 ttcgggccat ctaccctgat tgagactgac gcaggcggct ttgtatttga tgccggacga
      841 ggtgctacaa tccgaatctt ccagcttggc ggcgagcatc ctctgcgagc ccgcccctat
      901 tttgccagag ctgacaaatt atttctaact cacctgcatt ccgaccatgt tgaaggaatt
      961 ccagatctat ggctttccgg tcgtatgttt ggtcgactta caccgttcca agtttggggc
     1021 ccaccgggga caaaaagcct tatgactaac ttggaagctg cctatgccga agatatccgc
     1081 gttcgtcata aagcaaaaaa agaagccaac aagatcattg cacgcgatgt atatccggga
     1141 gaggtttata acaaaaatgg cgtatcaatt cgggcattca tggtcgatca tcaacccttt
     1201 aaatatgcgt ttgggtttcg aatcgattac gctggccgtg ctgttgttct ttctggtgat
     1261 actaaatact gtcaatgtgt gattgatgca gctaaaggtg ctgaccttgt gatacacgaa
     1321 gtagcggcag tgtctgaaca atttaagaaa cagatcccct tcttcgctac atttgaagat
     1381 aaccacgtca cacctgaaag agttggtaag gtatttgccg cagtcaaacc caaactcggg
     1441 gtcttcaccc atttggtaac atatggtgtt tcgcctgata agattatcga acgagcacgc
     1501 aaaacgtatt ctgggaagat ggtggtcggc aaagatttaa tgaggatttc agttgggaag
     1561 gtggtccgtg tcttggataa atagtaataa cacaaggggc tgacatagat aaactcaaag
     1621 tattcacatt ttggcccatt gcatcaaaac cttcaacaga ttggctgtag gccggtagtt
     1681 gaagcgccac ccacattcct tgagataaag atggatgtgg tgcttgggaa tgccgttgta
     1741 gcggcagaga tgctgtttgg cttggttcca gaagttctcg atctcgttga tgtggttgcg
     1801 gtgctcgatc taaacttgcg gttctaggga atcaaaaatt tgcgcggcgc cgattgctca
     1861 gtcatgccga cgctggtttc gggcaatacc aacgcaccga ccatgatggt cgccgatcgg
     1921 gcggtggact tcattctcca gaatgcttga ttgagtgcgc aaaaacttgg atgattctga
     1981 cgtcaaatta ctttgcgaac aacgtcgaca aatcaataga tgactgcttc tggctaatag
     2041 cggacatcaa gcagccggaa aataatgtcc gttctttaac ctaaagcgga cactgtagat
     2101 gtttaatcaa ttcggtgaat tatttgacaa tccaatattt tggattacaa aaagtcttgc
     2161 gaattgttat cattacgtaa atgtttcgcc gttaagagaa taaattatga atgccttatc
     2221 cattactgaa agtgccgcca accgcgtcac tgatctcata gcctcagatg gcaacgatca
     2281 attaatgctg cgcgtgactg tatcggcagg agggtgctca ggtttttctt atggcttcga
     2341 tcttgatgca aacaaaactg ctgaggatca aatttttcaa gatcatggtg tcaaaatcat
     2401 cattgatgat atgtcgctcg aaattctcgg caattcagaa gtcgattttg tcgatgatct
     2461 gatgggcgcg gcgtttagac tcaacatccc tagtgcgaca tcttcttgtg gctgtggcgt
     2521 ctcctttgcg gtttagctat cctttggcag ttataaataa tgtgttatga acggccctta
     2581 atcgggtctt ctttttttgg ataaagcttg aatggttaaa atagcgacat ggaacgtcaa
     2641 ttcggttaaa gcccgcctag cccatctgct cagatggctg gatgactttt cgccggatgt
     2701 ggttttactc caggaactta aatgcgttgc cgaagctttt ccgcatttgg aagttgaaga
     2761 taaaggctac aacatcgctg tcgccggcca gaaaacctat aacggcgtcg ccattctttc
     2821 caaaacaccg attgatatcg agctgacgga gctgccgggc gatccgagtg atgagcaagc
     2881 ccgctatatt gaaggattta cgggcggcgt tcgcgtagcg gcgatctatc tacccaatgg
     2941 caaccccgtg gatacggaaa aatatcccta taagctcggt ttcatggctc gcctgcatga
     3001 tcacgcaaaa gaattgctcg ccaccgagga cgtgtttgta ttgggcggcg actacaatgt
     3061 cattccggaa gatgccgacg tccatgaccc ggaaagctgg cgcggcgatg cgctgttccg
     3121 gccagagact catgcggcat ggcggaaact tatatatctt ggcctcaccg atgcgttccg
     3181 ggtctttaac ccggaagccg gccgctattc ctattgggat taccgggccg gcgcctggaa
     3241 caaagacaat ggcatccgca tcgatcatct cctgctgtca ccgcaagcca ctgacttatt
     3301 gacggcctca ggcgttgatc gcacgccgcg cggctgggaa aagccgtccg atcacacgcc
     3361 ggtttggtgt gagcttgatt tgtaagtttg ataacaaatt aatgattgac gcgttcgctc
     3421 ggaaaaatcg cactaacgat cgtgctggca ttcggcgaac tggatattct ccattcctaa
     3481 ctattttagc cattccctat tgtctcgtga tgccgcctca ttaatactaa gattaagtta
     3541 acactagggg actccaatca tggatgaagc acgcgtaaat gctgcagctg atcgccagga
     3601 aattaatgaa ttgctgatga actgggggca ggcccgcgac cgtgctgaat gggaaaattt
     3661 gcgcaactgt tttcaacctg acggcaccat agatattgct tggatatcgg gtcccgcctc
     3721 agagttcgtt gacaaatccg ctgagcggct agacgaattt aagcaaggtg aatacagcaa
     3781 acatgtgatg agtccgggcc gcattcaact caacggcaat cgagccttta gtcaatgtca
     3841 cgtcaatcat atctcccgcg tgattgttga tggccatgaa ttcgattggg aattttgggg
     3901 tcagtttttc gatcttattg aaaagcgcga ggacggtgtg tggcgccttt ttaatcgaac
     3961 tatggtgtat gaaaaggacc ggctcgacgc ggtgcatcca gatgccctgc ccgaaggtta
     4021 tttcgatgat acggatttcg ctgaatttct tcccgaggtc aggttcctca gttggcggtt
     4081 aaaaaagaac gatattccga cagccaaaaa tttgctcatc atcaacagcc cggaagaatc
//
LOCUS       DASCNL010000885         2338 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001826520, whole genome shotgun sequence.
ACCESSION   DASCNL010000885 DASCNL010000000
VERSION     DASCNL010000885.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001826520"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="QF359_11645"
     CDS             complement(<1..402)
                     /locus_tag="QF359_11645"
                     /inference="COORDINATES: protein motif:HMM:NF015651.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HJO87606.1"
                     /translation="MSKKSLLFIAKFIISALLIWLIAANFEIGSAAERLTEIEYIYLL
                     GVFVVYVTLLVNNTVRWQIVLNAIHAHLPFTVAAKILYISMFFNQTLPSAIGGDAFRM
                     FLARKAGVDLKGAINGVMLERAATVTGLIGLV"
     gene            complement(452..1516)
                     /gene="amrS"
                     /locus_tag="QF359_11650"
     CDS             complement(452..1516)
                     /gene="amrS"
                     /locus_tag="QF359_11650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system radical SAM enzyme"
                     /protein_id="HJO87607.1"
                     /translation="MNFSTKYWHALDDGRVQCDVCLRECKLRDGQRGLCFVRAAEGGE
                     IVLTTYGRSSGFCVDPIEKKPLNHFLPGTPVLSFGTAGCNLTCKFCQNYDISKSRQMD
                     KLAVQASPEKIAVTAEQIGCKSVAFTYNDPVIFMDYAIDVAEACHARDIKTVAVTAGY
                     ICPEPRREFYQHIDAANIDLKAFTDEFYMEFCSAHLDGVLDTLKYLKRETNTWFEITT
                     LLIPGENDSDKELNEECAWIMEHLGPDVPLHFSAFHPDWKMTDKPNTPPDTLHRARKI
                     AREQGLHYVYLGNIHDFDGSSTYCNACGETLIGRDWYELSTWNLTADGHCGKCGATCA
                     GVFDGPAGTWGRKRQPVRMG"
     gene            complement(1634..>2338)
                     /locus_tag="QF359_11655"
     CDS             complement(1634..>2338)
                     /locus_tag="QF359_11655"
                     /inference="COORDINATES: protein motif:HMM:NF020478.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1849 family protein"
                     /protein_id="HJO87608.1"
                     /translation="AMHLSKVGSNGGLTSARGVMTYVFKDQCDAWTVESKVYLRLRYG
                     NRPEIENVRSLVTWEAKDSLGFRFRVTKTTNGKKTEEIKGVAALDGAGLGGIAEYTKP
                     TAQRVVLKKGTLFPTAHIKTLIQRSVEGGKHLTMAIFDGATLDNPYEVSAVIGAGSGK
                     AKMSSRLSSVLGEAANWKMRLAYFPVNDAKQTPDVELGVEMREDGIVKLILQDFGSYA
                     VEARLDQVELLKDSGC"
BASE COUNT          588 a          642 c          570 g          538 t
ORIGIN      
        1 caccaagccg atcagcccgg taaccgttgc ggcacgctca agcatcacgc cgttaatcgc
       61 acccttcagg tcaacaccgg ctttacgggc taaaaacata cgaaatgcat cgccgccaat
      121 cgccgagggc agtgtctgat taaaaaacat cgaaatatag agaatttttg ccgccaccgt
      181 gaacggtaga tgcgcatgaa tggcgttaag cacgatctgc cacctgacag tattgttgac
      241 caacaacgtg acatacacaa caaaaacacc cagcaggtaa atatactcaa tttccgttaa
      301 ccgctcggcg gcggaaccga tctcaaaatt cgccgcgatc aaccaaatca acagcgccga
      361 gatgataaat tttgcaatga aaagtaggga tttcttactc atggccttcg tttagcatgg
      421 cagccgggga aaaaacaaac ccatttaaaa gtcagcccat ccgcaccggt tgacgcttac
      481 ggccccaggt cccggcaggg ccatcaaaga caccggcgca ggtagcaccg catttcccgc
      541 aatggccatc cgccgtgagg ttccaggtcg agagttcata ccaatcgcgg ccaatcaagg
      601 tttcgccaca agcgttgcag taggtgctgg agccatcaaa atcgtgaata ttgccgagat
      661 agacgtagtg gagcccctgc tcacgggcga ttttgcgggc gcgatgcaaa gtatccggcg
      721 gcgtgttggg cttatcggtc attttccaat cggggtgaaa ggcggaaaaa tgcagcggca
      781 cgtccgggcc gagatgttcc atgatccagg cgcattcttc gtttaattct ttgtcagaat
      841 cgttttcacc cgggatcagc aatgtcgtta tctcaaacca ggtattggtt tcacgtttga
      901 ggtatttcag cgtgtccagc acgccatcca aatgagccga gcagaactcc atataaaact
      961 catcggtgaa ggctttaaga tcgatattgg cggcatcgat gtgctgatag aactctcggc
     1021 gcggctcggg gcaaatatag cccgccgtca ccgcgaccgt tttaatatcc cgggcgtggc
     1081 aagcctcggc gacatcaatg gcgtaatcca taaaaataac cggatcatta taggtgaagg
     1141 caacactttt acagccgatc tgctcggcgg tgaccgcgat tttttcgggg ctcgcctgaa
     1201 ccgccaactt gtccatctgg cgggatttag agatatcgta gttctggcag aacttgcagg
     1261 tgagattgca gccggctgtg ccaaatgaca gcaccggtgt gcccggtaaa aaatgattaa
     1321 gcggcttttt ctcaatcgga tcgacgcaga accccgatga gcggccatag gtcgtcagta
     1381 caatctcgcc gccttccgcg gcccggacaa agcacagccc ccgctggcca tcgcgcagtt
     1441 tgcattcccg caagcagaca tcgcattgca cccggccatc gtctaatgcg tgccaatatt
     1501 tggttgaaaa attcatgcga gatgatagca cgtctggggc gtatttcggt gacagtttac
     1561 ttaattccct gaactgagaa acaatgttct taataaatta taaaattaag taaactgtca
     1621 ccaaaatacc cgttcagcag ccgctatctt tcagtaattc gacttgatca aggcgcgctt
     1681 cgaccgcata agagccaaaa tcctgcaaaa tgagtttaac gataccatcc tcgcgcatct
     1741 ccacaccaag ttcgacatcc ggcgtctgct tggcgtcgtt gacggggaaa tacgccagcc
     1801 gcattttcca attagcggcc tcgcccagca cagaggacag ccgggacgac atttttgctt
     1861 tgcctgaacc ggccccaata accgcgctca cttcataggg attatccaat gttgcgccgt
     1921 cgaaaattgc catggtgagg tgcttgccac cttcaaccga gcgttggatt agggttttga
     1981 tgtgagcggt cggaaaaagc gtgccctttt ttaacaccac ccgttgagcc gtcggtttgg
     2041 tatattcagc tataccgccg agcccggcac catccagtgc cgccacacct ttaatctctt
     2101 cggttttttt gccgttggtg gtcttcgtta cccggaaccg gaagcccaaa ctatctttgg
     2161 cttcccaggt caccagcgag cggacatttt caatttccgg ccgattacca tagcgcagcc
     2221 gcaaatatac tttgctttca accgtccagg catcgcattg atctttaaat acataggtca
     2281 tgacgccgcg cgcactggtc aaaccgccat ttgagccaac cttggagaga tgcatggc
//
LOCUS       DASCNL010000886         2441 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001828952, whole genome shotgun sequence.
ACCESSION   DASCNL010000886 DASCNL010000000
VERSION     DASCNL010000886.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001828952"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="QF359_11660"
     CDS             complement(<1..203)
                     /locus_tag="QF359_11660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87609.1"
                     /translation="MDGNNPITLESKYSATSGRVYVTGTQALVRLPMMQRQRDLLNGL
                     NTAGYITGYRGSPIGGYDSALWQA"
     gene            complement(393..1274)
                     /locus_tag="QF359_11665"
     CDS             complement(393..1274)
                     /locus_tag="QF359_11665"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87610.1"
                     /translation="MNTDYSPNNNLKGIVVMVIGMIGMAGTDAAGKWLMTSDYSVFQV
                     VAVRGWMIVVLLTAWILIKKRTAELRTMRLGAHGIRLVLAFCGPILMFSALATMPLAD
                     VTVIIFGSPFLTTALSVPIFKEKVGRHRWLAVILGFIGVVVVLRPSAGLFEPVAILAL
                     LAGVAFATVNLTARWLRDTETTICITFYTMVGMAILASLALPFVWQPIPLNDLVIFII
                     MAVFTLIGYLGMTGAFVMAPVGVVAPFEYTVLIFAVILGFVIWGDVPDGFVWTGAAII
                     IASGVYLIQREARAHKS"
     gene            complement(1347..2264)
                     /locus_tag="QF359_11670"
     CDS             complement(1347..2264)
                     /locus_tag="QF359_11670"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO87611.1"
                     /translation="MTNSLSQKLHTVPAAIVFGLIAAFIWGVWPVVSALSIDRSLSAL
                     DLTALRFGVAGIILLPLFWKRQLGILGRSSLSWKAVILIVAGAGLPYVLAGTGGLEFA
                     PAGHFGVITPSTQLMTSTLGGWLILKETQSRTRWIAVAIILCGVVLTGWEGLQGRGED
                     VWIGDLMFFSAGILWATFTLAARHYSVETFHAVALVSVWSAVLFFPVYLLFLDSGIPA
                     ASISEVVFQGVVQGLLTAVVALILFTRAIAILGAGRAAVFPTLVPGTVVLLAIPILNE
                     YPTLIEIFGLIIVSIGMMLAMGLLDRLRS"
BASE COUNT          716 a          666 c          549 g          510 t
ORIGIN      
        1 gcctgccaaa gagcagaatc atagccgcca atgggtgagc cacgatagcc ggtaatgtaa
       61 ccggccgtat tgagcccgtt caataagtca cgctggcgct gcatcatcgg cagccgcacc
      121 agagcttgcg tgccggtgac atagacccga ccgctggtag ccgaatattt gctctctaat
      181 gtgatcggat tattgccgtc cacgcttaag ctcccgctta ttcttagttg gccagcatta
      241 aagcgatttc gcccgcatta ataaaggttc caggtgcttt tagatttatt ttctaactgt
      301 atttctaact gtacccggta ccggactcgc aacaactact cgctagttgc gaatccggta
      361 cccggaacct tggaattaaa ttctataagc gattaggatt tgtgagcccg ggcttcacgt
      421 tgaataaggt agactccgct agcgataata atcgccgcac cggtccagac aaagccatcc
      481 ggcacgtccc cccaaatcac aaagcccagt atcacggcga aaatcagcac ggtatattca
      541 aagggtgcaa caacacccac cggcgccatg acaaaggcgc ccgtcatgcc gagatatccg
      601 atcagcgtaa ataccgccat gatgataaag atcacgagat cattaagcgg gatcggttgc
      661 cagacaaacg gcagggccaa actcgccaat atagccattc caaccatggt gtagaaggtg
      721 atgcagatcg ttgtctcggt atcgcgcaac cagcgcgcgg taagattgac ggtcgcaaat
      781 gccacccctg ccagtaaggc taaaatggcg actggctcaa ataatccggc gctgggacgc
      841 agaacgacga ccacgccaat aaatcccaaa atcacggcca gccagcgatg gcggccaact
      901 ttttctttaa agatcggcac cgacagcgcg gtggttaaaa atggcgagcc aaagataatt
      961 accgttacat cggcgagcgg catggttgcg agcgcgctga acattaaaat tggaccgcaa
     1021 aaagccagca ccaatcggat accatgggcg cctaagcgca tggttctaag ctcggccgtg
     1081 cgttttttaa tcagtatcca ggctgtcaat aaaacaacaa tcatccaacc ccggacggcg
     1141 accacttgaa acacagaata gtcgctggtc atcaaccatt ttccggcggc atcggtaccg
     1201 gccatgccga tcataccgat gaccataacg acaatacctt ttaaattatt attgggggag
     1261 tagtctgtgt tcatgggaag accttttcag gcctcaacca atttgtcgag caggtctttt
     1321 gatatttttt attctcgatg acaaattcac gatcttaatc gatccaataa tcccatcgcc
     1381 agcatcatac caattgaaac aataatcaga ccgaagatct caatcaaggt tggatactcg
     1441 tttaatatcg ggatagctag caaaactacc gttcctggta ccaaggtcgg aaatacagcc
     1501 gcccgcccgg cgcccaggat cgcaattgcc cgcgtaaaaa gaattagtgc aacgactgca
     1561 gtgagcaacc cctgcaccac cccttggaat acaacttccg aaatcgaagc cgcaggaata
     1621 cctgaatcca agaaaagcaa atagaccgga aaaaataaca ccgctgacca cacggagacc
     1681 aaggccacag catgaaatgt ttcaaccgaa taatgccgag cggctaaggt aaacgtcgcc
     1741 cacaatattc ccgccgagaa aaacatcagg tcaccgatcc aaacgtcttc accgcgacct
     1801 tgcaaaccct cccaaccggt cagaaccacc ccgcaaagga taatggcgac cgcgatccat
     1861 cttgtacggc tttgtgtttc tttgagaatt aaccaaccgc cgagggttga tgtcataagt
     1921 tgagtgctcg gcgtgatcac accaaaatga cctgccggag caaattctaa tccacccgta
     1981 cccgccagca catatggtag ccctgccccg gcgacaatta aaatcaccgc tttccagctt
     2041 aaactactac gcccgagaat gccgagctgc cgtttccaga acaacggcag caatatgatc
     2101 ccggcaacac cgaaacgaag cgccgttaaa tccaaggccg acaaagatcg gtctatactc
     2161 aaggccgaga cgactggcca cacgccccaa ataaaagcgg cgatcaaacc aaacacaatg
     2221 gcggctggga cggtatgaag tttttgagag agagagttgg tcacgcgggc ttaaacctat
     2281 tttttaaccc gactgaaaat aaaatgctat ttcagtgagt tccttgaatc ctgttatact
     2341 tatgcgaaca ggttagaact caaatccttg gtgaaatcaa ccaaaggtaa gaaatttaag
     2401 ttccacctta atggcaatca cgagcaaatt catcgctgcg g
//
LOCUS       DASCNL010000887         3574 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001831983, whole genome shotgun sequence.
ACCESSION   DASCNL010000887 DASCNL010000000
VERSION     DASCNL010000887.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3574)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3574)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3574
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001831983"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..862)
                     /gene="aroC"
                     /locus_tag="QF359_11675"
     CDS             complement(<1..862)
                     /gene="aroC"
                     /locus_tag="QF359_11675"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003623525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HJO87612.1"
                     /translation="MSGNSFGHLFQFTTFGESHGPAIGCVVDGTPPNIDLNENDIQIW
                     LDKRRPGQSRHTTQRKEADKVRILSGIFEGITTGTPIGLLIENTDQRSKDYEDIKNLY
                     RPGHADYTYDQKYGIRDYRGSGRASARETACRVAAGAIARKVLGDAIDVRGALVQMGP
                     HKIDRNKWDWAEINNNPFWCPDADMAKEWDSYLDDIRKAGSSIGAVIEIVARGVPVGL
                     GNPVYDKMDANIAKGLMSINAAKGVEIGVGFGAAELSGEENADEMRMLDGRPSFLSNN
                     AGGILGGISTG"
     gene            complement(877..1701)
                     /gene="fabI"
                     /locus_tag="QF359_11680"
     CDS             complement(877..1701)
                     /gene="fabI"
                     /locus_tag="QF359_11680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HJO87613.1"
                     /translation="MSNSAGLMAGKKGLIMGVANNRSIAWQIAQATSNQGADLAFTFQ
                     GEALQKRVVPLAESVGSEIVLPCDVTDDSSIDAVFAKIKKKWGKLDFVLHGIAFSDKD
                     ELTGKYLDTSADNFALTMQISCYSFTAICQRAQEFMTDGGALLTLTYAGSERVMPHYN
                     VMGVAKAALEASVRYLAEDLGSQNIRVNSLSAGPMKTLAASGIGDFRYILKWNEYNSP
                     LRRNVSNEDVGGSGMYLLSDLSSGVTGETHHVDCGYNIVGMKAVDAPDITVNNGES"
     gene            complement(1940..>3574)
                     /locus_tag="QF359_11685"
     CDS             complement(1940..>3574)
                     /locus_tag="QF359_11685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HJO87614.1"
                     /translation="ELLLPAGSLEKLKIAVLYGADAVYLGTPDLSLRTKSEFTLEEVV
                     EGVEFAHKYGKRVYLTLNLFSHNKDIDKLPDYVDTVRKVQPDGLIVADPGVFMFVKER
                     APELDLHVSTQANVCSWQSVKFWQDQGASLCVLGREVSFNELTEIREKCPNIKLEAFI
                     HGAMCMTYSGRCLLSNFMAERGANQGACANSCRWKYKVHMRLKDGTSKELPLTEENLE
                     LFEFLLEEEIRPGEFMPIEEDDRGSYILNSKDLCIMPKLDDLLRIGVDSLKVEGRGKS
                     IYYVALVARAYRMAIDDWYNDPENWSAEDYMDELLTIPNRGYTYAFHEGRLTNHSHGY
                     ENTATLGAWEYAGIVQSVEDDAFIIEGKNKLEASDVLEFVPPNDRDTILLRLYEFEHA
                     KTGEIRSVINGGHDPYFRVPFAVFDQEDLTTLKDRIPPMTVLRKERSLTEVQWDRIKL
                     DAETHAIEAGKGSVQAYTNKRDRLRESQALRDTSLKEKTPRIGMEGCCGKGCNGCLMF
                     WHDPSYARARELLAEKKQGELFDQNMKDKPADKISA"
BASE COUNT          842 a          925 c          888 g          919 t
ORIGIN      
        1 gaccggttga gatgccgcct aaaataccgc cggcattgtt cgagagaaag ctcggtcggc
       61 catccagcat gcgcatttca tcggcatttt cttcaccact cagttcagcc gcgccaaaac
      121 caacgccaat ttcaacaccc ttggcggcgt taatactcat caaacctttg gcaatgttgg
      181 catccatttt atcatagacc ggattaccga gtccgacagg cacgccgcga gcgacaattt
      241 ctatgaccgc gccgatggag gagcctgctt tgcggatgtc atcaagatag ctgtcccatt
      301 ctttggccat atcagcatcc gggcaccaga acggattatt attaatttcg gcccaatccc
      361 atttattgcg atcaatttta tgggggccca tttgcaccag cgcgcctcgg acgtcgatag
      421 catcaccaag tactttcctg gcaatcgcac cggcggcaac ccggcaggcg gtttcccgtg
      481 cgctcgcccg accgctgccg cgataatcgc gaatgccgta tttttgatcg taggtgtaat
      541 cagcatggcc tggacgatat aagtttttga tgtcttcgta gtccttggag cgctgatcag
      601 tgttttcaat caacaaaccg atgggtgtgc cggtggttat accttcgaat atgcccgaca
      661 gaatacgcac cttatcggcc tctttacgtt gggtagtatg gcgcgattgt cccggccggc
      721 gcttatccaa ccagatttgg atatcatttt cgttgaggtc tatattagga ggcgtgccgt
      781 ctaccacaca gccgatggcc gggccatggc tttcaccaaa tgtcgtgaac tgaaataggt
      841 ggccaaagct atttcccgac atcagacata ctcgccttaa gactcaccgt tattgacggt
      901 gatgtcaggc gcatcgacgg ctttcatacc gacaatgtta tagccgcaat cgacgtgatg
      961 ggtttcaccg gtaacgccgg acgataaatc actgaggaga tacatgcccg agccgccaac
     1021 atcctcattg gacacattgc ggcggagcgg cgagttatat tcgttccact tgaggatata
     1081 gcggaaatcg ccaatgccgg aagcagccaa ggttttcatc ggaccggccg agagagaatt
     1141 cacccgaatg ttctggctgc cgaggtcttc ggcaagatag cgcacactgg cttcaagcgc
     1201 tgccttggcg acacccatga cattatagtg cggcatgacg cgttcggagc cggcgtaggt
     1261 cagtgttaaa agcgcaccac catcggtcat gaattcctgc gcgcgctggc aaatggcggt
     1321 gaaggaataa cacgagatct gcatcgtcag ggcaaaattg tccgccgagg tatcgagata
     1381 ttttccggtc agctcatcct tatcggaaaa ggcgatgcca tggaggacaa agtcgagctt
     1441 gccccatttt ttcttaatct tcgcaaagac tgcatcaatg ctactgtcat cggtaacatc
     1501 gcagggtagc acgatttccg agcccacgga ttcggcaagt ggtaccacgc gcttctgcaa
     1561 agcttcacct tgaaaagtga aggccaggtc agcaccttgg ttggaagttg cttgggcgat
     1621 ctgccaggcg attgagcgat tattggcgac gcccataatc aatccctttt tgcccgccat
     1681 caggcctgct gaattactca ttggtccctc gttatttatc accataccgg aagtctatcg
     1741 gtaaccccgc cgattttgcc gcaccataat taaaactaag ttgatgatcg acaaaaagat
     1801 ttaaagcttt gctaagacta ttattttatg gggaatttat gcggtttctt aagctaaata
     1861 gcaatgcaaa atggccaagt attcagttgt atcttatcac attttttaac aaaagatttc
     1921 agattcgcaa attgaagttc taagcgctaa ttttatcggc tggtttgtct ttcatatttt
     1981 gatcaaacaa ctcgccctgt tttttctcag ccagcaactc gcgcgcccgg gcataagatg
     2041 gatcgtgcca gaacatcaag cagccattgc agcctttgcc gcagcagcct tccatgccga
     2101 tgcgcggtgt tttctctttt agagatgtat cccggagggc ctgcgactcc cgcagcctat
     2161 cgcgtttgtt ggtataagct tgcaccgatc ctttgcccgc ttcaatcgcg tgtgtttcag
     2221 catcaagttt tatgcggtcc cattgcactt cagttagcga gcgttctttg cgcagcactg
     2281 tcatcggcgg gatgcggtcc ttgagagtcg ttaggtcttc ttggtcgaac actgcaaacg
     2341 gcacgcggaa gtagggatca tggccaccat tgatgacgct tctaatctcg ccggttttgg
     2401 cgtgctcaaa ttcataaagc ctaagcagga tagtgtcgcg gtcgttcggc ggcacaaatt
     2461 ccagcacatc actggcttca agtttgtttt tgccctcgat gatgaatgca tcgtcttcaa
     2521 ctgattgcac tatgccagca tattcccaag ccccaagcgt cgccgtattt tcataaccat
     2581 gcgaatgatt ggtcaagcgg ccttcatgaa aagcataggt gtagccgcga ttgggaatgg
     2641 tcagcaactc atccatatag tcttcggctg accagttttc tggatcattg taccaatcat
     2701 cgatggccat acggtaagcg cgggcgacga gggcgacgta atagatgctt ttgccacggc
     2761 cttcgacttt gagcgagtcg acaccgatcc ttaaaagatc atccaatttc ggcatgatgc
     2821 agagatcttt ggaattaagg atataagaac cacggtcatc ttcttcgatt ggcataaatt
     2881 cgccggggcg tatttcctct tcgagcagaa actcaaacag ctctagattt tcttcggtca
     2941 gcggcagttc tttgctagtg ccgtctttaa gccgcatatg aaccttgtat ttccagcggc
     3001 agctattggc gcaggcccct tggttggcgc cgcgctcagc catgaagttg gataataggc
     3061 agcgcccgga ataggtcatg cacatagcgc catggataaa agcttccagc ttaatgttcg
     3121 ggcatttttc tctaatttcg gtgagctcat taaaagacac ttcgcggcca agcacgcaca
     3181 ggctggcgcc ttgatcctgc cagaatttga ccgattgcca ggaacagaca ttggcttggg
     3241 tagatacgtg gagatccaat tcgggtgccc gttccttgac gaacatgaaa acgccaggat
     3301 cggcgacaat caggccatca ggctgaactt tgcgtaccgt atcgacatag tcgggcagtt
     3361 tgtcgatatc cttgttgtgg gaaaacagat tgagagtgag atagacgcgt ttgccatatt
     3421 tatgggcgaa ctctacgccc tcaacgactt cttccagcgt gaattcagac ttagtgcgga
     3481 gcgacagatc gggcgtgccg agataaaccg catccgcgcc atagagcacg gcgattttca
     3541 gcttttccag cgaacctgcc ggtagcagca gttc
//
LOCUS       DASCNL010000888         3302 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001833961, whole genome shotgun sequence.
ACCESSION   DASCNL010000888 DASCNL010000000
VERSION     DASCNL010000888.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001833961"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3302)
                     /gene="smc"
                     /locus_tag="QF359_11690"
     CDS             complement(<1..>3302)
                     /gene="smc"
                     /locus_tag="QF359_11690"
                     /inference="COORDINATES: protein motif:HMM:TIGR02168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HJO87615.1"
                     /translation="CGKSNLVEALKWVMGETSAKQMRGSEMDDVIFSGTRNRPARNIA
                     EVGLALDNSDRAAPSQFNETDELDVTRKIEREKGSTYRVNTKEVRARDVHLLFADAAS
                     GARSTALVSQGQIGEVVSAKPAQRRKLLEEAAGISGLHSRRHEAELRLRGAETNLERL
                     DDIMVTLEAQMLSLRKQVRQATRYRNLNDHIRKAEAILFLIRWTVVSLEMDQSGELLS
                     EAEAAVTVTTSLTSAASVDQAEAASYLPELREKEAEAAAALQRLTLAKESLEEEEARL
                     AAAQEECETRLEQVGQDMERERNLAVDANAAMRSLAEENERISSIEQDQEAAIDEAEE
                     KLAGIRGEYDQQEHGLSELTEQVAGQEAQRSDLARRRAELEARLARLRDSNEELAAEI
                     FQLEEAAIDRVAIAAMEAKLSDAVTALEQARTQVESAEQARIKATRRLTETQSQAQTT
                     LATAAKLEAEASALAELLKTGDPDLWPPLIDAVTVESGLEGALGTALGDDLSAATDEA
                     APIHWRNLPNNGDNPALPSGAEPLSNFVNGPAALVARLSQIGVVADSDTGWHLLPQLK
                     QGQRLVSRDSAFWRWDGFTSTADAPTSAATRLEQRSRLAETRGSFESAQAAAKLVEDD
                     VVTAREALETTTQQEQAARAVVREAETARDTAQQEMTQLQQLATENNTKLAARNDATS
                     RIAADLSEAENGLKEVSKTESNLPDAESGRREVDSLRTTVGKKRGELVEVQSAYDTLK
                     NQAEERRQRLAAITEELAKWNNRKKGAAKQLEELGERKLSLEAERERLAQQPEEIKRR
                     HQDILDKVDEAEKTRKDAADRLAEAETKLSDADRNLREAEAKLATIREQRVRAEAAVE
                     QAKQASEALIERVEDRLSCGPEALRELSGIAEDAEMPELGAAEKRVERLLRERENMGP
                     VNLRAETEAQELKEQIETLTTEREDLLKAIDKLRRGINDLNREGRKRLLTSFEEVDKH
                     FQELFIRLFGGGRAHLELVESDDPLEAGLEIMASPPGKRLQVLSLLSGGEQALTALSL
                     LFAVFLTNPAPICVLDEVDAPLDDANVDRFCTLVDELAHSLSTRFLVITHHRMTMARM
                     DRLYGVTMGEQG"
BASE COUNT          631 a          936 c          873 g          862 t
ORIGIN      
        1 accttgttcg cccatggtca caccgtaaag gcgatccatt ctggccattg tcatgcggtg
       61 gtgggtgata accagaaagc gggttgataa tgaatgcgcc aattcatcga cgagcgtgca
      121 aaagcggtcg acattggcgt catccaatgg tgcatcgacc tcatcaagta cacaaattgg
      181 cgctggattg gtcaaaaata ccgcgaacaa tagtgatagt gccgttaaag cctgctcacc
      241 gcccgataat aacgagagca cctgcaaacg ttttccgggc ggactagcca taatctcaag
      301 accggcctcc agtggatcat ccgattcgac cagttccaga tgagcgcgac caccgccaaa
      361 taggcgtata aacaattctt ggaagtgctt gtctacttct tcaaacgaag tcagcaatcg
      421 cttgcggcct tcacggttaa gatcattgat gccgcggcgc agcttatcaa tagctttgag
      481 taaatcttcg cgctcggtgg tgagagtttc gatctgttcc ttgagctcct gtgcctcggt
      541 ttctgcacgc aaattaaccg ggcccatatt ttcccgttca cggagtagcc gctcgacgcg
      601 tttttcagcc gctcccaatt caggcatttc cgcatcttcg gcgataccgg aaagttcacg
      661 cagtgcctcc ggaccacaac tgagacggtc ttccacgcgt tcaatcagtg cttcggaagc
      721 ttgcttggct tgttcaaccg ccgcttcagc gcggacccgt tgttcccgga tggtcgccag
      781 cttggcttcg gcttcgcgca gatttcgatc agcatcggaa agtttagttt cagcttcggc
      841 taatcggtca gccgcatctt tgcgtgtttt ctctgcctca tcgactttat cgagaatatc
      901 ttggtggcgg cgcttaattt cttctggttg ctgagcgaga cgttcacgtt cggcttcaag
      961 cgacaacttg cgttcgccta attcttcgag ctgtttggct gcgccttttt tgcggttgtt
     1021 ccatttggct agctcttcgg tgatggcagc aagacgctga cggcgctctt cggcttgatt
     1081 tttcaaggta tcgtaggctg attgcacttc gaccaactca ccacgttttt tgccaacggt
     1141 ggtacgcagc gaatctactt cccggcggcc ggattcggca tcgggcaaat tagattcggt
     1201 ttttgatact tctttgaggc cattttccgc ttcactaaga tcggcagcaa tgcggctggt
     1261 ggcatcattt cgggccgcaa gtttggtatt gttctcggtc gctagctgct gtaactgagt
     1321 catttcctgc tgagcagtat cgcgagcagt ttccgcttct ctgactactg cacgggcggc
     1381 ttgttcctgc tgcgtggtgg tttcaagggc ttctcgcgcc gttacgacat cgtcttcgac
     1441 taatttggct gctgcttgag cgctttcgaa acttcctcgg gtttctgcca agcggctgcg
     1501 ttgttccaag cgagtagcgg cggatgttgg agcatcagcc gttgaagtaa agccgtccca
     1561 gcgccaaaac gcgctatcgc ggctaaccag acgctgccct tgcttaagct gcggcagcag
     1621 atgccagccg gtatcgctgt cggccactac accaatctga gaaagtcttg cgaccagagc
     1681 cgcaggtcca ttaacaaaat tactcagcgg ctcagcaccg gagggtaggg caggattgtc
     1741 cccattgttt ggcagattgc gccaatgtat tggggcggct tcatcggtag cggcgctcaa
     1801 atcatcaccg agtgccgtgc cgagagcacc ttctaatcca gattccactg ttacggcatc
     1861 aatcaagggt ggccacaaat cgggatcacc ggttttgagc aattctgcga gcgcgcttgc
     1921 ttcggcttca agttttgccg ctgtcgccaa ggttgtttgt gcctgcgatt gcgtttcggt
     1981 gagccggcgg gttgccttga tgcgggcttg ctcagcgctt tcaacttgcg tgcgggcttg
     2041 ttccaaggcg gtaacagcgt ctgataattt agcttccatt gccgcgatag caacgcgatc
     2101 aatggctgct tcttcaagtt gaaatatctc tgcggccagt tcttcattgc tatcacgcag
     2161 ccgcgccagg cgggcttcca attcagcacg ccgccgggct agatcactgc gctgtgcttc
     2221 ctggccggca acctgttcgg tcaattcact taagccatgt tcctgttgat catactcgcc
     2281 gcgaatgcca gccagttttt cctctgcttc atcaatcgcc gcttcctggt cctgctcaat
     2341 gctgctgata cgttcgtttt cttctgccag actgcgcatt gccgcgttcg catctacagc
     2401 cagattgcgc tcacgctcca tgtcctggcc aacttgttca agccgggttt cacactcttc
     2461 ctgcgccgct gcaagacgag cctcttcctc ttccaggctt tctttggcga gagtaaggcg
     2521 ttgcaaggcc gctgcggctt ctgcctcctt ttcacgcagt tcaggtaaat aacttgccgc
     2581 ctcggcttga tccaccgaag cagcagaggt aaggctggtt gttaccgtaa cagcggcttc
     2641 ggcttcgcta agcaattccc cgctttgatc catctctaat gatactaccg tccagcggat
     2701 caggaacaag atcgcttcgg ctttgcggat atgatcattg agattgcggt agcgggtggc
     2761 ttggcgcact tgcttgcgca gcgacagcat ctgcgcttcc agtgtcacca taatatcatc
     2821 aaggcgttca agattggttt cggcaccgcg cagcctcagt tcggcctcat ggcggcggga
     2881 atggaggccg gatatgccgg cggcctcttc gagcagcttg cggcgttggg ctggtttggc
     2941 ggaaacgact tcgccgatct ggccttggct aaccagcgcc gtcgagcggg cgccactagc
     3001 ggcatcggca aatagcagat gaacatcgcg ggcgcgcact tccttggtat taacccggta
     3061 ggtcgaaccc ttttcccgtt caatcttgcg ggtaacatca agctcatcag tctcattgaa
     3121 ctgtgacggt gctgcccggt ctgaattatc aagcgccagg ccaacctcgg cgatattgcg
     3181 cgctggccgg ttacgggtgc cggagaagat aacgtcatcc atctcgctgc cgcgcatctg
     3241 tttggctgag gtctcaccca tcacccactt caacgcctca acaaggttgg atttaccgca
     3301 cc
//
LOCUS       DASCNL010000889         2137 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001834955, whole genome shotgun sequence.
ACCESSION   DASCNL010000889 DASCNL010000000
VERSION     DASCNL010000889.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001834955"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="QF359_11695"
     CDS             <1..238
                     /locus_tag="QF359_11695"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO87616.1"
                     /translation="SSLEKKGIVTVVDAKIGLLTPPLGISCFVIKSTTNDPKISPYYI
                     FSGAFPFTVTMLLVLIILINYPTLSTYLLQLGLM"
     gene            complement(277..774)
                     /locus_tag="QF359_11700"
     CDS             complement(277..774)
                     /locus_tag="QF359_11700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87617.1"
                     /translation="MDIEFFAMSVFAGLMGTYALLVLANWADSIGMPRLDFSRAMANV
                     TFARTFDKGVAPGAGVEAPNTPYWPGMAVIMVNGIFFALLYSSWTHQYISVDSAVFGI
                     APNIVKGAIWGVVLWFVSGVFYVPFYLREGFMLTGIHPWAWLTSLKVHGAYGMMVGWI
                     APVTG"
     gene            complement(866..2029)
                     /locus_tag="QF359_11705"
     CDS             complement(866..2029)
                     /locus_tag="QF359_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJO87618.1"
                     /translation="MPDGREEISVQVLTKISDIPAVDWDVCAGNENPFISHAFLNTLE
                     QSGSVSDRNGWLPQHLMIEDANGQAAACMPIYLKNHSYGEYIFDWGWADAYERAGGKY
                     YPKLQTAVPFTPATGPRMLVRDGAPERYYDVLIAGMIRLARQHNVSSLHVTFPLESEW
                     KRLGQAGFLQRTSKQFHWENKGYETFDEFLGELNSRKRKAIKKERRQVAAQGIELYPV
                     TGADLTEDHWDTFYHYYMDTIDRKWRRPYLTREFFSILGETMADVAVLIFAEHDGRRV
                     AGALNLRGSDTLFGRNWGCTEDFKFLHFEACYYQAIDFAIQHKLQWVEAGAQGPHKIQ
                     RGYLPREVYSAHWIEDPNFREAVERFVDQERRDVDYEIKGLMEYSPYRKTDTA"
BASE COUNT          548 a          553 c          510 g          526 t
ORIGIN      
        1 ttcttcactc gagaaaaaag gtattgtcac cgtggtggat gccaagatcg gtctcctgac
       61 cccgccgctg ggtatttcgt gttttgtcat caaaagcacc accaatgacc ccaagatttc
      121 cccgtattat attttttccg gcgcctttcc ctttaccgta acgatgttgc tggtattaat
      181 cattttgatc aactatccaa ccctcagcac ctacctgctg caattagggc tgatgtgacg
      241 gggcattatg aattaagtaa gctgtcccct taattactaa cctgtgaccg gggcgatcca
      301 accgaccatc ataccataag caccatgaac ttttaggctg gtgagccaag cccaggggtg
      361 aatgcctgtc agcatgaaac cttcccggag gtaaaacggt acgtaaaaca cgccggagac
      421 aaaccacagc acaacacccc atatcgcgcc tttgacaata tttggcgcaa tgccgaaaac
      481 agcgctatca acagaaatat actggtgcgt ccaggaggaa tacaatagcg caaagaatat
      541 tccgttaacc ataataacag ccatacccgg ccagtagggc gtgttcggtg cttcaacacc
      601 tgcgcctggc gctactcctt tatcaaatgt tcgggcaaag gtgacattag ccatggcgcg
      661 gctgaaatcg agccgtggca taccgatact gtctgcccaa ttagccagca caagtaaggc
      721 gtaagtcccc ataagaccgg cgaataccga catcgcaaaa aattctatat ccattgttaa
      781 aaacctccat taaatctccg ttattgttga ttatctgaat aaaccatgtg tcctcgaaat
      841 gccatattga acgcggtggt ttccgctagg cggtatcggt cttgcgatag ggcgaatatt
      901 ccatcaaacc ttttatctca taatcgacat cccggcgttc ctgatcaacg aatcgttcaa
      961 cggcttcccg gaagttggga tcttcaatcc agtgtgcgct gtagacttcg cggggcaggt
     1021 atccgcgctg aattttgtgc ggcccttggg cgccggcctc gacccattgc agtttgtgtt
     1081 ggatggcaaa gtcgatagct tgataataac aggcctcaaa atggagaaat ttaaagtctt
     1141 cggtgcagcc ccaattgcgg ccgaacaggg tgtccgaccc cctcaaatta agcgcgccgg
     1201 caacgcgccg tccgtcgtgc tcggcgaaga ttaacaccgc cacatccgcc atggtttcac
     1261 cgagtatcga gaagaactca cgggtcagat aaggccgtct ccatttgcgg tcaatcgtat
     1321 ccatatagta atgataaaag gtgtcccaat gatcctccgt gaggtcagcg ccggtgaccg
     1381 gatagagctc gataccttgc gcggcaactt ggcggcgttc ttttttgatg gctttgcgct
     1441 tcctggaatt aagctcacct aaaaattcat caaaagtttc atagcctttg ttttcccaat
     1501 gaaattgttt gcttgttcgc tgtaaaaaac cggcttggcc aaggcgtttc cattcgcttt
     1561 caagcggaaa agtgacgtgt aaagacgaga cattatgctg gcgggcaagc cggatcatgc
     1621 cagcgattag gacatcgtaa tagcgctccg gcgcaccgtc acgcaccagc atgcgtgggc
     1681 ccgtagccgg cgtgaagggc acggccgttt ggagctttgg atagtacttt ccaccagccc
     1741 gttcataagc atccgcccag ccccagtcga agatgtactc accgtaagaa tggttcttaa
     1801 gatagatcgg catacaggcg gcggcctggc cgtttgcgtc ttcgatcatc agatgctgcg
     1861 gtagccagcc attacgatct gagaccgaac cactttgctc caacgtattc agaaaggcat
     1921 ggctgatgaa cgggttttca ttgcccgcac agacatccca atccacggca gggatgtcgc
     1981 tgatcttggt caggacttga acggatatct cttcgcggcc atcgggcatg gaatattgat
     2041 aggactcatt taaaatgaga gcaagtcgca aggtgttgag tgatcaaatt tgttaatgac
     2101 ccctattagg tgaaaaatat aaatatttac aatctta
//
LOCUS       DASCNL010000890         2013 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001837149, whole genome shotgun sequence.
ACCESSION   DASCNL010000890 DASCNL010000000
VERSION     DASCNL010000890.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001837149"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..895)
                     /locus_tag="QF359_11710"
     CDS             complement(<1..895)
                     /locus_tag="QF359_11710"
                     /inference="COORDINATES: protein motif:HMM:NF020084.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HJO87619.1"
                     /translation="MFQVAHAQNTDWESALDDCLRDLAPNPQARLGFVYVTDIVALHL
                     SDVLKALKDETGIDQWVGSAGLGICAMGHEYFDVSAIAVMTTDIPEEAFDIMPTIDAV
                     DLLEYDNEPVNDNYLGGPPLVLLHADCTNSEVLDIIDNIANKSGGYLIGGLTTCATPK
                     HHIANEVTGGGVSGIIFNPKIQVTTALSQGYRPIGEVHEITECSENFVIGLDGRKVIE
                     VFQEDIGDVLARDLQKVAGYIHVALPVVGSDTGDYVVRNLIGVDTDEGVLAIAAPVEH
                     GDHLMFVSRDVNAAEQDLAKMV"
     gene            complement(924..1457)
                     /locus_tag="QF359_11715"
     CDS             complement(924..1457)
                     /locus_tag="QF359_11715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HJO87620.1"
                     /translation="MVFGDSLSAGYGLPKSDSFTARLTQALKQSGVNVQVVASSVSGD
                     TTSGGKARLAWALADKPDAILLELGANDGLRGIEPTLSRANLENILQRLQRSGTLVLL
                     AGMKAPPNLGKEYASEFNRIYPELAARFKIPLYPFFLDGVVARPEMNQADGIHPNPRG
                     VDEIVKRILPMVVKLVR"
     gene            1613..>2013
                     /locus_tag="QF359_11720"
     CDS             1613..>2013
                     /locus_tag="QF359_11720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO87621.1"
                     /translation="MSEPRQNSNLTNGAAVYLQDVHLSLTSAAGEVNILRGISLAVDQ
                     GEAVGIIGPSGGGKSTMMMVIAGLERVSSGQVETAGIDLGQMDEDELALFRRDNVGIV
                     FQDFHLIPTMTALENVAVPLEFAGKKMEKPV"
BASE COUNT          523 a          517 c          485 g          488 t
ORIGIN      
        1 ccaccatttt ggcaagatct tgctcggcag cgttaacatc acggctgaca aacattaagt
       61 gatcaccgtg ctcgactggt gcggcgatgg ccagcacccc ttcatccgta tcaacaccga
      121 tcaaatttcg cacgacgtaa tcgccggtat cagaaccgac aaccggtaga gcaacatgga
      181 tatagccggc gaccttttgt aaatcgcgcg ccaggacatc accaatatct tcctgaaata
      241 cttcgatcac cttgcggcca tcaagaccaa tgacaaagtt ttcgctacac tcggttattt
      301 catggacctc accaatcggc cggtaacctt ggctcagtgc cgtcgtcact tgaatcttgg
      361 ggttaaatat tattcccgac acaccgccac cggtaacttc attggcaata tgatgtttgg
      421 gtgttgcaca ggttgtgagt ccaccaatca gataacctcc agatttattc gcgatattgt
      481 caataatatc aagcacctcg gaattggtgc aatcggcatg tagcagcacc aatggcgggc
      541 cgcctagata attgtcattc actggctcat tgtcatattc cagcaaatca accgcgtcga
      601 tggtcggcat gatatcaaac gcctcttcag gtatatcagt cgtcataacg gcgatcgccg
      661 acacatcaaa atattcatgc cccatcgcgc aaatgccgag gccggcactg ccgacccatt
      721 ggtcaattcc cgtttcgtct ttcaaagctt tgagcacatc ggataaatgc agtgccacaa
      781 tatcggtgac atagacaaat cccagcctcg cctgaggatt tggcgccaga tcccgcaggc
      841 aatcatcaag cgcggattcc caatcagtgt tttgcgcatg ggcgacttga aacatattat
      901 ctgttttcct aatacacgag cggctatctt actagcttga ccaccatcgg caatatgcgt
      961 tttacaatct catcgacgcc acgcggattg ggatgaatgc catctgcctg gttcatctcc
     1021 gggcgcgcga cgacgccgtc gagaaaaaac ggatatagcg ggattttaaa ccgtgccgca
     1081 agttccggat aaatgcgatt gaactcgctg gcgtattcct taccaaggtt aggcggtgcc
     1141 ttcattccgg ccaatagcac aagggtgcca cttcgttgta aacgctgtaa tatattctcc
     1201 agattagcgc gtgagagagt gggttcgatc ccgcgcaagc catcgtttgc accgagttcc
     1261 aataatatcg cgtcaggctt atcggccaat gcccaggcaa gccgcgcttt tccgccagag
     1321 gttgtatcac cggaaacgct ggaggcgaca acctgcacgt tcacaccgct ttgtttgaga
     1381 gcctgggtca gcctcgcggt aaaagagtcg gatttaggca agccgtagcc tgccgacaaa
     1441 ctgtcgccaa aaaccatcaa tttgatggtt tccgccgctt gagacggaac tatggcccac
     1501 tgggttagta aaaaaaatat cgcgaggaat acccccaaca accaaaaacg gcttgtcgag
     1561 ttgtgagaaa gcgacttatg aactaaatga aaaagaaaca tgagtttaat atatgtccga
     1621 accacgccag aattcaaatc taaccaatgg tgctgctgtt tatttgcagg acgttcatct
     1681 ttcgctcacg agcgcggcgg gagaggtgaa tatactgcgc ggtatttctc tggcggttga
     1741 tcaaggggaa gctgtcggca ttataggtcc atccgggggt ggcaaatcta ccatgatgat
     1801 ggtgatcgcc gggcttgagc gggtatcttc cggccaagtt gaaacagcgg gcatagattt
     1861 aggtcaaatg gatgaagatg agctagcgtt gtttcgccgt gacaatgtcg gtatcgtctt
     1921 tcaagacttt catcttatcc caaccatgac ggcattggaa aatgttgccg tgccattgga
     1981 atttgccggt aaaaagatgg aaaaacctgt aag
//
LOCUS       DASCNL010000891         1199 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001837284, whole genome shotgun sequence.
ACCESSION   DASCNL010000891 DASCNL010000000
VERSION     DASCNL010000891.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001837284"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /gene="rplJ"
                     /locus_tag="QF359_11725"
     CDS             complement(<1..346)
                     /gene="rplJ"
                     /locus_tag="QF359_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019647176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HJO87622.1"
                     /translation="MDRTTKEEKVASLKQTFEDSEMVVVTHYIGMTMPEMADLRDRMR
                     EAGASFKVTKNRLTRLALQDTDFESLTELMTGPTALAYSADPVAAAKTAVNYAKDNDK
                     LVILGGVFNGQSL"
     gene            complement(663..>1199)
                     /gene="rplA"
                     /locus_tag="QF359_11730"
     CDS             complement(663..>1199)
                     /gene="rplA"
                     /locus_tag="QF359_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HJO87623.1"
                     /translation="RHADQMVRGVVSLPNGTGKTVTVAVFAKEDKAEEAKAAGAEFVG
                     GNDLAEKVQKGEVEFDRCIATPDMMAVVGKLGKVLGPKGLMPNPKLGTVTPNVADAVK
                     SVKGGEIEFRVEKAGIIHVGVGKTSFSQEALVENVNAFVGAIVKAKPAGAKGTYLKRA
                     TLTSTMGPGVRLDTSTLT"
BASE COUNT          280 a          327 c          260 g          332 t
ORIGIN      
        1 ccagcgattg tccgttgaag acaccaccca agatgaccaa tttgtcatta tccttggcat
       61 aattgacagc cgttttcgct gctgccaccg gatcggcgga ataagcgaga gcggttggac
      121 ccgtcattag ttcagtcaag gattcaaaat cagtatcttg cagggcgaga cgcgtaaggc
      181 gattcttagt gaccttaaaa ctggcacctg cttcgcgcat gcggtctcga agatcggcca
      241 tttccggcat tgtcatccca atataatgag taacaacgac catttccgaa tcttcgaacg
      301 tctgcttcag cgaggcaacc ttctcttctt tagttgttcg gtccacgaat cgtctccgtg
      361 tttgcacaaa taagagagtt tcctctccgc ctcatgcagt tagcgtttag tttctggaaa
      421 actttccaaa aaccggttcg ccctatccaa gtcatcagtt tgagtcatcg tcgaccacat
      481 agatgatcgg aaaatgtctc attaccgtct atgcaggctt actcttatta tgtcgcgtca
      541 caaaagttca gcggcacctg cagtctcgga caggccggag aggctgacaa ttttcaccct
      601 ctcctatttc tgctccttca aaagaaacag cagaaaatct ttaatttatc tggcccgagt
      661 tatcaggtca gagttgaagt atctaatctc acaccaggac ccatggtcga cgttaatgtc
      721 gcgcgtttta gataggtccc tttggcaccg gctggtttcg ctttaacaat ggcgcccaca
      781 aacgcgttca cattttcgac caaagcttcc tgagagaaac ttgttttgcc gacgccgaca
      841 tggatgatac cggctttttc gactctaaat tcaatttcgc cgcctttgac ggatttgact
      901 gcgtcagcaa cattcggtgt cactgtgcca agtttcgggt tcggcatcag acctttcggc
      961 cccagtacct taccgagctt gccgacaacc gccatcatgt ctggtgtggc gatacaacga
     1021 tcaaactcaa cttcgccttt ttgcactttt tcagcgagat cattaccgcc aacaaattca
     1081 gcgccggcag ctttggcctc ttcggctttg tcttcttttg caaataccgc aacggtgaca
     1141 gtttttcctg taccatttgg caacgacacc acaccgcgaa ccatttggtc tgcgtggcg
//
LOCUS       DASCNL010000892         1020 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001837408, whole genome shotgun sequence.
ACCESSION   DASCNL010000892 DASCNL010000000
VERSION     DASCNL010000892.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001837408"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /gene="purQ"
                     /locus_tag="QF359_11735"
     CDS             complement(<1..457)
                     /gene="purQ"
                     /locus_tag="QF359_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HJO87624.1"
                     /translation="MKAAVILFPGSNRERDMVMALEASLGTPPLEIWHGDTELPEVDL
                     IVVPGGFSYGDYLRSGAMAAHSPIIREVKDRAEKGVHVLGVCNGFQILTETGLLPGAL
                     MRNAGLKFICKDVHLKVERNDTPFAEGYNVGDVMRVPVAHHDGNYFADDE"
     gene            complement(492..734)
                     /gene="purS"
                     /locus_tag="QF359_11740"
     CDS             complement(492..734)
                     /gene="purS"
                     /locus_tag="QF359_11740"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HJO87625.1"
                     /translation="MKAKIHVTLKNGVLDPQGKAVSHALGSLGFEGVDDVRQGKYIEV
                     DLAETNADKARESVDEMCRQLLANTVIENYDIEIEA"
     gene            complement(756..>1020)
                     /locus_tag="QF359_11745"
     CDS             complement(756..>1020)
                     /locus_tag="QF359_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011253803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HJO87626.1"
                     /translation="SLVLEEFQNMVRRRQLFEGDQMRIVLADEISPDNCRLRDAITDE
                     ILDIDRFRRDMDMIAEGYQEVTRRLGILPENSEPDVSGPRLVK"
BASE COUNT          251 a          278 c          223 g          268 t
ORIGIN      
        1 tctcatcatc ggcaaaataa ttaccatcgt gatgggcgac cggcacgcgc ataacatcac
       61 caacattata gccttctgca aagggcgtat cattgcgctc gaccttgaga tgcacatctt
      121 tgcaaataaa cttaaggccg gcattgcgca tcagggcgcc cggcaaaagt ccggtttcgg
      181 tcagtatctg aaagccgtta caaaccccca acacatggac acctttttcg gccctgtctt
      241 taacttcgcg gatgatggga gaatgcgccg ccatcgcgcc ggaacgcaaa taatctccat
      301 aagaaaaccc cccggggaca acgatcagat caacctccgg cagttcagtg tcgccatgcc
      361 agatttctag gggcggtgtg cctaaacttg cttcaagtgc catcaccata tcgcgttcgc
      421 gattggatcc ggggaaaagg ataacggctg ctttcatgga ggtattagag ctttcaaaat
      481 tctttgagct tctacgcttc tatttcgata tcataatttt ctatcacggt attcgctaaa
      541 agctgacggc acatctcatc aacactctcg cgtgctttgt cagcattggt ttcggctaaa
      601 tcaacttcga tatatttgcc ctggcggaca tcatcgacac cttcaaagcc gagtgagcct
      661 agggcatggc taacggcctt accttggggg tcaagcacac catttttcaa ggtgacgtgg
      721 atttttgctt tcaagatttc tttccttcaa atttcttatt taaccaatct cggtcctgag
      781 acatccggct cgctattttc cggcaatatg ccaaggcggc gggtgacttc ctgatagcct
      841 tcagcgatca tatccatatc ccggcgaaac cggtcgatat ccaatatctc atcggttatg
      901 gcatccctca gacggcagtt atctgggctg atctcatcgg ccagcacaat gcgcatttga
      961 tcaccttcaa agagctgtcg gcgtcgcacc atattctgga attcctccaa aactaaactg
//
LOCUS       DASCNL010000893         1257 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001837570, whole genome shotgun sequence.
ACCESSION   DASCNL010000893 DASCNL010000000
VERSION     DASCNL010000893.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001837570"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            183..311
                     /locus_tag="QF359_11750"
     CDS             183..311
                     /locus_tag="QF359_11750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87627.1"
                     /translation="MSGRIQAAVTILAVEANFEKANDPEEVAKLAAIIRDEALVQM"
     gene            complement(340..1059)
                     /locus_tag="QF359_11755"
     CDS             complement(340..1059)
                     /locus_tag="QF359_11755"
                     /inference="COORDINATES: protein motif:HMM:NF013702.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HJO87628.1"
                     /translation="MLAFLWIAMPFSPSTFRRAISLWPKGCFALLKIIGVTFEMRGLE
                     NLPKKPVVFAVKHQSVWETIFFLWQHRDNAYIMKSELTRIPFWGWYMTKSSHVLVDRT
                     GGAKSMRELIRKTKEIMDNSRSIAIFPEGTRMPSGSIGTFHPGVAAIYTQLDTTIVPV
                     AVNSGLFWPRRKFLKNPGKIIIEFLPPIEPGMGRKEFMAELQSRIKAATEKLEKEAGF
                     LAPEEISENTSESTKNSGETG"
BASE COUNT          328 a          277 c          307 g          345 t
ORIGIN      
        1 ctcgttcagg tggtccgggg tccggagcag ataatggatt ggttgatttc acgaaaatga
       61 acgtgattta actaaatttg acgatacaga aaccagctat tttccttata cttgtaaatt
      121 taatatgaaa ggaatctaaa ttaatttgca acgaagaaat tggttaagat ccctgcgttt
      181 tgatgtcagg ccgtattcaa gccgctgtaa ccattttggc ggtcgaggca aattttgaga
      241 aagccaatga tccggaggag gttgcaaaac tagctgcgat aatcagagac gaagcattgg
      301 tacagatgta aaggtgccgc ttccccaatt aattgagtgt catccggttt ccccagagtt
      361 cttagtactc tcgcttgtgt tttctgatat ctcttccggt gccaaaaagc cggcttcttt
      421 ttcgagtttt tcggtggctg ctttgatacg gctttgcagc tctgccataa attctttgcg
      481 gcccatacca ggctcaatcg gtggcaggaa ttcgatgatg atcttgcccg gattttttag
      541 gaatttccgg cgcggccaga ataatccgga gttgactgcg actggcacga tggtggtgtc
      601 caactgcgtg taaattgcag caacgccggg atggaacgta ccaattgaac cagacggcat
      661 ccgcgtacct tccgggaaga tggcgattga gcggctgtta tccatgattt ctttggtttt
      721 tctgatcaat tcacgcattg atttagcacc accggtccgg tcgactagca catgcgagct
      781 tttggtcatg taccagcccc aaaacggaat gcgggtgagc tcggatttca tgatgtaggc
      841 attgtcgcga tgttgccata ggaaaaagat cgtttcccac actgattggt gtttgacggc
      901 aaagaccact ggttttttag gtaagttttc tagccccctc atttcaaagg taacgccaat
      961 aattttcagc agcgcaaaac agccctttgg ccagagcgaa atggcgcggc gaaatgtcga
     1021 cggtgaaaac ggcatagcga tccagaggaa ggccagcata aaagtggtcc aaccaaaaaa
     1081 taaaaaatta aatattcccg aacgaatata attcatgggg ccggtgatcc attaatcaat
     1141 ataccccata gcttttccat ttttcggcgc gcggaagcga caatatattt ggtatattca
     1201 ctgatgatca gcgctgccgt ccccggccat agccaccatt gggcgcgttt aaattgt
//
LOCUS       DASCNL010000894         1508 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001843048, whole genome shotgun sequence.
ACCESSION   DASCNL010000894 DASCNL010000000
VERSION     DASCNL010000894.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001843048"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..102
                     /locus_tag="QF359_11760"
     CDS             <1..102
                     /locus_tag="QF359_11760"
                     /inference="COORDINATES: protein motif:HMM:NF012720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HJO87629.1"
                     /translation="AAWYWHFVDVVWIFLFINVYIWGSSSFGHVAAG"
     gene            121..501
                     /locus_tag="QF359_11765"
     CDS             121..501
                     /locus_tag="QF359_11765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HJO87630.1"
                     /translation="MRDRHHKDTGGSPIKFATFGCCPRCGRGHLFAGYLLVADKCSEC
                     GLDLGGEDAADGPAVFIMLIVGFVVAGSALWLELSYEPPTWVHMVIWPPVILMLCLGT
                     LRPFKGAFIGVQYKYRSVEETDLE"
     gene            complement(899..1390)
                     /locus_tag="QF359_11770"
     CDS             complement(899..1390)
                     /locus_tag="QF359_11770"
                     /inference="COORDINATES: protein motif:HMM:NF017849.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF934 domain-containing protein"
                     /protein_id="HJO87631.1"
                     /translation="MTLLKNGEVAEDSWRNLANEDAISVEEAIIISLKRWQESRDEFS
                     GRNGQLGIRLESNQKPDEISADIDRFELIALNFSPLPDGRVFSYARILRERYGFQGEL
                     RATGKVIQDQLFFMHRCGFDSFELSAGEDIEKSIAALSSFSVAYQPAADDIEPAYKTR
                     HDA"
BASE COUNT          359 a          343 c          373 g          433 t
ORIGIN      
        1 gccgcctggt attggcattt tgttgatgtc gtttggatat tcctcttcat caatgtttat
       61 atttgggggt cttcttcctt cgggcatgta gctgccggat aacataggag ctagaatctc
      121 atgcgtgacc gccatcataa agatactggc gggtcaccca taaagtttgc aacttttggc
      181 tgttgccccc gctgtgggcg cggccatttg tttgccggtt atctattggt cgctgacaaa
      241 tgcagcgaat gcgggctgga tttaggtggt gaggatgcgg ctgatgggcc ggcagttttc
      301 attatgctga ttgtggggtt tgtcgttgct ggcagtgcac tttggctgga actgtcttat
      361 gaaccgccaa cctgggtgca tatggtgatc tggccgccgg tgatcctcat gctctgctta
      421 ggtacgctcc gacctttcaa aggggccttc atcggcgtgc agtataaata ccgctcagtc
      481 gaagaaactg acctcgaata aaaggtgcct tttaaacttt gccgtttaga tcgctcaaaa
      541 aggcgctgag tattttattg acacccagac taaacgcagc gacggaccag tcaatattgg
      601 cattctaaga cggcagttcg accgtatagg tgtcaagatg gatcagctgt tcgagcttgg
      661 cgtttttgag gttgagttct aacgaaatta cgaccttgtt tgcagaactt acaatttgct
      721 caaagcgcag gattttgcca cttagtataa aatcagtttt gatccggttt tggcgatgaa
      781 atttctcgaa atcctaccgc agattatcga gattcggatt acccacgctg atgaggaaga
      841 agactacaat atctataatt tagctgcggt gaattaatcc gttcatatct ctctaaattt
      901 aagcatcgtg tctcgtttta taggcgggct cgatatcatc tgccgccggt tgataagcga
      961 ccgagaaaga gcttagtgcg gcaatcgact tctcgatatc ttcgcctgcc gatagttcga
     1021 aggagtcgaa gccacagcga tgcataaaga ataattgatc ttggatcact ttgccggtcg
     1081 cccgcaattc cccttggaaa ccgtaacgtt cgcgcaaaat tctggcgtag gaaaaaactc
     1141 gtccgtcggg taagggggaa aaattgagcg caatcagttc aaagcggtca atatctgctg
     1201 aaatttcatc cggcttttga ttgctttcta atcgaatgcc aagttggccg ttgcgcccgg
     1261 aaaattcgtc ccgcgattcc tgccagcgtt ttaatgatat aataatcgcc tcttcgacag
     1321 agatggcatc ttcattggct aaattgcgcc agctgtcctc cgcaacctcg ccatttttaa
     1381 ggagcgtcat acaatgcctc cttgaacgga ttttggccaa ggcggcgata agtctcaaga
     1441 aagcgttcat tatcatggcg gttcgatatg taggcaccga caactttctc gacagcatca
     1501 attatttc
//
LOCUS       DASCNL010000895         1208 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001843974, whole genome shotgun sequence.
ACCESSION   DASCNL010000895 DASCNL010000000
VERSION     DASCNL010000895.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1208)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1208)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001843974"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            121..>1208
                     /locus_tag="QF359_11775"
     CDS             121..>1208
                     /locus_tag="QF359_11775"
                     /inference="COORDINATES: protein motif:HMM:NF024267.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HJO87632.1"
                     /translation="MVTLDQKDIVATLIKALPVAVAVVDQDGRIGPGNIAFQKLWQLE
                     AGHLDGQPTLSTFLDKLNDQRQLPEQNNFPKFRASIIKKALAETTSNDEWHLPDGSAL
                     KIRFKPLDDERHLFIIEDLTPQLATERAFNEFVHTHQATLDHLQEGLAVFGSNGLLKL
                     HNPAFAEIWQLPEDALEHDLHMTDFLDATRQNLPVLKNWPERRDKLSGRLLGRKAGID
                     QITTNNNQVLEAAHIPLPDGAVLLRYADISDSVKLEEHLRQQAEEMAERADIMAAADR
                     LKSEFLANLSHEIRTPLNTIGGFAQMLAGDYFGDLNKRQQDYADGIVEASGAVSGLVG
                     DILDLASIEAGLLELQIERVDLHHCLTD"
BASE COUNT          300 a          282 c          327 g          299 t
ORIGIN      
        1 cagcgtctcg caagccggac cgtttaaacc ggatcattac cggtattaac ttctaattga
       61 attcgtttta agcctgtcag cccacttgtt acggtgagcg gagaggccta aaatttatac
      121 gtggttacgc ttgatcaaaa agatatcgtt gcaacgctga taaaggcgct gccggttgcg
      181 gtggcagtgg tggatcagga cgggcggatt gggcccggca atatcgcctt tcaaaaattg
      241 tggcagctgg aagcgggtca tcttgacggc caaccaaccc tgtctacttt tttggacaag
      301 ctgaatgatc agcgccaatt gccggagcaa aataactttc caaaatttcg ggcgagcatc
      361 ataaaaaagg cgctcgccga aaccacatcg aatgatgaat ggcatttgcc ggacggttca
      421 gcgctgaaaa taaggtttaa gccgttagat gatgagcgcc acctcttcat tattgaagat
      481 ctgacgccgc agttggcgac cgagcgcgcc ttcaacgaat ttgttcatac ccaccaagca
      541 acgctagatc atttgcagga aggcttggcg gtctttggca gcaacggttt gcttaaactt
      601 cataacccgg cttttgcgga gatttggcaa ttaccggaag atgcgcttga gcatgatctt
      661 cacatgacgg attttctcga tgcgacgcgc caaaatttac cagtgctgaa aaattggccg
      721 gagcgacggg ataaactgtc gggccggttg ttggggcgca aggctggcat cgatcaaatt
      781 accacgaata acaatcaagt tttggaagcc gcccatattc cgctgcctga tggagccgtg
      841 ctgctgcgct acgccgacat tagtgattcg gtaaaactcg aagaacattt gcggcaacaa
      901 gccgaagaaa tggccgagcg cgctgatatt atggcggcgg cggatcggct gaaatccgag
      961 ttcctagcta atctcagcca tgaaattagg acacctctta acactattgg gggttttgcc
     1021 cagatgctgg cgggagatta ttttggtgat ctcaataagc gtcagcaaga ttacgccgac
     1081 ggtattgttg aggcttcggg ggcggtttcc ggcttggttg gtgatattct cgatcttgct
     1141 tcgattgagg cgggcctgct cgaattgcaa atcgagcgag tcgatctgca tcattgccta
     1201 accgatat
//
LOCUS       DASCNL010000896         1024 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001844352, whole genome shotgun sequence.
ACCESSION   DASCNL010000896 DASCNL010000000
VERSION     DASCNL010000896.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001844352"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            65..829
                     /locus_tag="QF359_11780"
     CDS             65..829
                     /locus_tag="QF359_11780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87633.1"
                     /translation="MGANRLDLAGRNAIVTGGAAGLGFAIAERLAQSSANVCVWDINQ
                     DAIDEAVAKLDSEGDGIACGVVGNVADVASVADAVKTTLDKRGGIDITVNNAGISGPN
                     TTSWEYPPEEWQKVIDVNLTGTFLVCSAVIPVMLENDYGRIVNIASVAGKDGNPKAPA
                     YSASKAGIIGLTKALGKELATTNVMVNCVTPAAVRTSIFDQMTQDHIDFMLSKIPMGR
                     FGKAKEIAAMVAWLCSEDCSFSTGGVFDLSGGRSTY"
     gene            841..>1024
                     /locus_tag="QF359_11785"
     CDS             841..>1024
                     /locus_tag="QF359_11785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate isomerase"
                     /protein_id="HJO87634.1"
                     /translation="MKLISYKADGKVCYGMVTDDGVVDASARLAEQYPTLRDVIAADA
                     LDQLKSLAGEAADHALD"
BASE COUNT          234 a          239 c          295 g          256 t
ORIGIN      
        1 aaggcgttag cgtcagaaat accgttgaag gcttgggttc gtgcagcttt ggagtggcga
       61 agtaatgggt gcaaatagac ttgatcttgc cgggcgcaat gccatcgtta ccggcggtgc
      121 cgctggcctc ggttttgcca ttgccgaacg tctggcgcaa tccagcgcta atgtttgtgt
      181 ctgggatatt aaccaggacg ccattgatga ggcggttgcc aagctggaca gcgaaggtga
      241 cggcatagct tgcggtgttg tcggtaatgt cgccgatgtg gcttcggtag ctgatgcggt
      301 taaaacgacg ctggataagc gcggtggtat tgatattacc gtcaacaatg ctggtatctc
      361 tggtcccaac accaccagct gggaatatcc accggaagaa tggcagaaag ttatcgacgt
      421 caatctgacc ggtacttttc tggtgtgctc ggcggttatt ccggtgatgc tcgaaaatga
      481 ctatggccgc atcgtcaata tcgcctcggt cgccggtaag gacggcaatc ccaaggcgcc
      541 tgcctacagc gccagtaagg ccggtatcat cggacttacc aaggctcttg gcaaagaact
      601 ggcaaccacc aatgtgatgg ttaattgtgt cacgccagca gctgtcagga cttcaatctt
      661 tgaccagatg acccaagatc atatcgactt tatgttgtca aagattccca tgggccgctt
      721 tggcaaagcc aaggaaatcg cagcgatggt tgcctggcta tgctcggaag attgttcttt
      781 ctcgactggc ggcgtgtttg acctctcagg tggtagatca acctattaag aggaatctaa
      841 atgaagctta taagctataa agctgacggt aaggtttgct atggcatggt tacggatgat
      901 ggtgttgtcg atgcttcggc ccggctcgcc gaacaatacc cgacattgcg cgacgtcatt
      961 gccgctgatg cgctggatca attaaagtcg cttgcaggcg aagctgctga tcatgcgtta
     1021 gatg
//
LOCUS       DASCNL010000897         1306 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001845408, whole genome shotgun sequence.
ACCESSION   DASCNL010000897 DASCNL010000000
VERSION     DASCNL010000897.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1306)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1306)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001845408"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(139..408)
                     /locus_tag="QF359_11790"
     CDS             complement(139..408)
                     /locus_tag="QF359_11790"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJO87635.1"
                     /translation="MTSSVIVKFCEDDDQITAAYPIMEQLRPHLDEADFFEQIRRQIQ
                     SGYRLVAAHLGDEIVGVIGYRFAEDLAWGRTLYVDDLVVDENHRG"
     gene            complement(425..>1306)
                     /locus_tag="QF359_11795"
     CDS             complement(425..>1306)
                     /locus_tag="QF359_11795"
                     /inference="COORDINATES: protein motif:HMM:NF018004.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HJO87636.1"
                     /translation="RHEFTQPNMETARVRQIDALNSQNGPIFTTHKPDVLLAEVIQKT
                     IKGAADYHVVGEGKVEHTLWVVTEPDDIAKITQGFDRVKVIYIADGHHRTAAASRIAE
                     ARKADNPNHTGAEQYNFFLIVSFPESEVQILDYNRVVKDLNGLSEAGFLKKIEAEFIV
                     EQVDKPAKPTVRNNFGMYLSGKWYALVLKEPAPNGGSPVDRLDISLLTSRLLEPILGI
                     GDPRIDPRIDFIGGIHGMIGLEKRVDNGHWAVAFALFPTSIIELMSVADAKEIMPPKS
                     TWFEPKLADGMISLMLE"
BASE COUNT          331 a          348 c          280 g          347 t
ORIGIN      
        1 actggttttg tccatgtcaa ttccttcgta gaatcgatgg gcttgttagc gcgtcaaatc
       61 gctacaaagc cgtagggttt ggcaatcctg gcgctcggct tccatttcgc cacctttcat
      121 caaagcttcg ccaacgccct agccgcgatg attttcgtca acgacaagat cgtcaacata
      181 aagagtgcgt ccccaggcca aatcttcagc aaatcgataa ccgattacgc caacgatttc
      241 atcgccaaga tgcgccgcga ccagcctgta tccggactgt atctggcggc gtatttgttc
      301 aaaaaaatca gcttcatcca gatgcggccg taactgctcc ataattggat aagccgccgt
      361 aatttgatca tcatcttcac agaattttac aatcactgaa ctcgtcatag ctccacacgt
      421 aaccttattc caacatcagg gaaatcatac catcagccag cttaggctca aaccaagtac
      481 tttttggtgg cataatttct ttcgcgtccg ccaccgacat aagttcaata atgctggttg
      541 gaaacagcgc gaacgcaacc gcccaatggc cattatcgac gcgtttctcc aacccaatca
      601 tcccgtgtat accgccaata aaatcaatgc gtgggtcgat acgcggatca ccgataccta
      661 aaatcggttc aagcagacgc gacgtcagca gcgagatatc cagccggtca actggcgatc
      721 caccatttgg tgctggttct tttaacacca aggcatacca tttaccgctc agatacatgc
      781 caaaattgtt acggaccgtc ggttttgccg gtttgtccac ttgttcaaca ataaattccg
      841 cctcaatttt tttgagaaac cccgcttctg aaagcccatt caaatctttg accacgcgat
      901 tgtagtctag aatctgaacc tcagactcgg gaaaactaac aatcaggaaa aagttgtact
      961 gctcagcgcc ggtgtgattt ggattatctg cttttctggc ttcggcaatt cgtgaagccg
     1021 ccgcggtacg gtgatgtcca tcggcaatat aaatgacttt aaccctgtca aaaccttgcg
     1081 taattttggc gatgtcatcg ggttcggtta ccacccaaag tgtgtgttcg actttgcctt
     1141 cgccgacgac atgataatcg gcagcgcctt taattgtttt ttgaattact tcggccagca
     1201 aaacatcagg cttgtgagtg gtgaagatcg gaccgttttg cgagttcagt gcatcgatct
     1261 gccgaacccg ggctgtttcc atgttaggct gcgtaaactc gtgacg
//
LOCUS       DASCNL010000898         1255 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001846521, whole genome shotgun sequence.
ACCESSION   DASCNL010000898 DASCNL010000000
VERSION     DASCNL010000898.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1255)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1255)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001846521"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            4..168
                     /locus_tag="QF359_11800"
     CDS             4..168
                     /locus_tag="QF359_11800"
                     /inference="COORDINATES: protein motif:HMM:NF012673.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87637.1"
                     /translation="MQPYDYCALVPVVEGAGGKISDWAGQPLTFNSDGRVLAVGDPAL
                     HQVVLDLFTS"
     gene            273..>1255
                     /locus_tag="QF359_11805"
     CDS             273..>1255
                     /locus_tag="QF359_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HJO87638.1"
                     /translation="MRKPGMGRLIKIILGLAAAVLPFAVEAQKAPKPVHGIAMHGSPK
                     YGPSFKHFDYVSPNAPKGSKVRLSAIGTFDSFNPYIIKGNPAAGIGGFIYESLMTSSQ
                     DEAFTEYGLLSETIEMPEDRSWVAFTLRKEARWHDDKPVTVEDVIFSLDTLKTKGQPF
                     YRFYYRGVAKAEKAGQRRVKFTFGGGKNRELPLIIGQLPILPKHIWADKDFSKTTLEL
                     PIGSGPYRVKSFDAGRSITLERVKNYWGANLAVTKGQYNFDEMRFDYYRDSTVALEAF
                     KSGEYDFRQENASKIWATGYDSPAFKKKLYKKQTIRHENPTGMQGFVFNTR"
BASE COUNT          326 a          322 c          302 g          305 t
ORIGIN      
        1 accatgcagc cttatgacta ttgcgccctg gtgccggtgg ttgaaggcgc cggaggaaaa
       61 atatccgatt gggccggtca gccgttaacg ttcaactccg atggccgcgt cctggctgtt
      121 ggtgatccag ctctacacca agttgttctc gacctattca cttcttaatt agcatttaat
      181 tccaaggtgc cgggtacctt ttatagcgat cacagtaatt atacttgatc ccgccccatt
      241 ctcgaccaca atagtgttaa ggataagaaa aattgaggaa accgggtatg ggtcgattga
      301 tcaagattat tttaggttta gctgctgcag ttttgccctt tgccgtcgaa gctcagaaag
      361 cgcccaagcc ggtgcacggc attgccatgc atggcagccc aaaatacggg cccagcttca
      421 aacattttga ctatgtcagt ccgaacgccc ccaaaggcag caaagtccgg ctcagcgcca
      481 tcggtacttt cgactcgttc aatccctaca tcattaaagg caaccccgcc gccgggattg
      541 gtggatttat ctacgaatca ctgatgacca gttcccaaga tgaggccttc accgaatacg
      601 gtctgctctc cgaaacgatc gagatgcctg aagaccgctc ctgggtcgcc ttcacgttgc
      661 gcaaagaggc ccgttggcat gacgacaaac cagttacggt tgaagatgtg atatttagtt
      721 tggataccct taaaaccaaa ggccagccgt tttaccggtt ttattatcgc ggtgtcgcca
      781 aggctgaaaa agccggtcaa cgccgggtta agttcacgtt tggcggtggt aaaaaccggg
      841 aactaccact gatcatcggt caactaccga tcctgccaaa acatatctgg gcggataaag
      901 atttctctaa aactacgttg gagctgccga ttggcagcgg tccctacaga gtaaaatcct
      961 ttgatgccgg gcgctcgatc accctggaac gggtaaaaaa ttactggggt gcaaatttgg
     1021 cagtcaccaa aggacagtat aattttgatg aaatgcgctt tgattattac cgggattcga
     1081 ccgtggcttt ggaagcattt aaatccggag aatatgattt ccgtcaagag aacgcctcga
     1141 agatttgggc taccggttac gattctcccg ccttcaaaaa aaagctctac aaaaagcaaa
     1201 ccattcgcca cgagaacccg accggcatgc agggctttgt tttcaacacc cgcag
//
LOCUS       DASCNL010000899         1109 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001846619, whole genome shotgun sequence.
ACCESSION   DASCNL010000899 DASCNL010000000
VERSION     DASCNL010000899.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1109)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1109)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001846619"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /locus_tag="QF359_11810"
     CDS             complement(<1..1072)
                     /locus_tag="QF359_11810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase
                     N-terminal domain-containing protein"
                     /protein_id="HJO87639.1"
                     /translation="MSPDQTALATPSPSTASHQDMANAIRFLSADAVQRANSGPPGMP
                     MGMADVATVLFSRFLKFDAANPTWADRDRFVLSAGHGSMLLYSLLHLTGYADMTMQEL
                     KNFRQLSSKTAGHPEYGEAGGIECTTGPLGQGLTMAVGMALGERMTNARFGDDLVDHY
                     TYVTAGDGCLMEGVSHEAISMAGHLKLAKLIVLFDDNAISIDGGTDMTVSDDQLARFQ
                     ASGWDVSAVDGHDPEAVTAAIEAARKTDTPSMIACKTVIGKGAPNKEGTSSTHGAPLG
                     DDELTAAREKMGWPYAPFEISEDVQAAWRAVGSAGAQEREAWQARLDASKRQDEFNAA
                     MAGELPAGLTDAINAHKKSLSEE"
BASE COUNT          256 a          310 c          282 g          261 t
ORIGIN      
        1 cctcttcgga caggcttttt ttgtgagcat taatagcgtc agtgagtcca gcgggcagct
       61 caccagccat cgctgcatta aattcgtctt gtcgcttgct cgcgtctaat cttgcttgcc
      121 aagcttcgcg ctcttgtgcg ccagcagaac cgacagcacg ccacgctgct tgaacatctt
      181 cggaaatttc aaatggtgca tacggccaac ccattttttc ccgcgccgca gtaagttcgt
      241 catcgcctag tggcgcacca tgagtgctag aggtgccttc tttattaggc gcacctttac
      301 caataacagt tttgcaggcg atcattgacg gcgtatcagt tttgcgggca gcttcaattg
      361 ccgctgtcac ggcttccgga tcgtggccat caacagcaga tacatcccag ccagatgcct
      421 ggaagcgggc caactgatca tcagagaccg tcatatccgt accgccatca attgagatgg
      481 cattatcgtc aaataaaaca attagcttag ccaacttgag atggccggcc atggatatag
      541 cttcgtgact gacgccttcc atcaagcaac cgtctccagc agtgacgtag gtgtagtgat
      601 ctaccagatc gtcaccaaaa cgtgcattgg tcatgcgttc accgagcgcc atgccgactg
      661 ccatagtgag cccctgcccc agcggtccgg tcgtgcattc aataccaccg gcttcaccgt
      721 attcaggatg gcccgcggtc tttgaactca actgcctaaa gtttttcaac tcctgcatcg
      781 tcatatcggc atagccggtg aggtggagca gcgaatagag cagcatcgaa ccgtgaccgg
      841 cagacaacac aaaacggtcg cgatccgccc aagtgggatt ggcggcatca aacttcaaga
      901 accggctaaa cagcacggtt gcgacatcag ccatacccat cggcattccc ggaggaccgc
      961 tattggcgcg ctgcacagca tccgccgaca aaaagcgaat tgcgttggcc atgtcttgat
     1021 gtgatgcagt agagggtgaa ggtgttgcta gtgcagtttg gtcaggcgac atttaggtgt
     1081 tgctcctacg ctatttgaga gagcttgga
//
LOCUS       DASCNL010000900         2562 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001846703, whole genome shotgun sequence.
ACCESSION   DASCNL010000900 DASCNL010000000
VERSION     DASCNL010000900.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001846703"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..964
                     /locus_tag="QF359_11815"
     CDS             <1..964
                     /locus_tag="QF359_11815"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87640.1"
                     /translation="GLKPNIGKQKTEKLIKKDKVDFMTGFIWSHVMGASAPVALKAGK
                     IFVSANAGHSLYAGKKCHKNFFNAAWENSQNPMAMGSLLNRRGVKKLYVLSLNYAAGK
                     QMVDGVERTFKGNIVGKDLVPLSHKDWSAEIAKVKAAKPDGVFVFYPGSWGPKFFTQY
                     KQAGLDKTTPLYSVFSVDGANLPVFQKYKMKHLIGTFNTMFWAPDLDNATNKRFVADF
                     GKKYKGQIPSHYAAQAYDSLMLIAAGVKAAGGDAKNIDAVRKGMEAADFPSVRGKIKF
                     GKNHFPIQNFYSRQVVNKDGKWQLSVLDTVVKDHAPVMSNECKL"
     gene            1050..1973
                     /locus_tag="QF359_11820"
     CDS             1050..1973
                     /locus_tag="QF359_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO87641.1"
                     /translation="MDYVLLAEQFFNGFQLGIILFLVAAGLTLIFGIMDLVNLAHGTL
                     YMFGAFFAATFVLLTDSLILGMIIALPVMLIAGILLELTVLRTLYERNHLDQVLATFG
                     LIIFFNEFFLIAWGPEGTGINLPPYLSGTISLPGGITVPDYRMVIIVSGLLVALFLYI
                     LVSKTRIGMLIRAGASNREMVGALGINIKLLFTLVFGLGAVLAGFSGMIITPITQAES
                     GMGESILILAFVVIVIGGIGSIKGAFIAAILTGLIDTMGRSFIDVALLQIMDTVAAET
                     AGPAISSMLIYILMAVILAIKPSGLFPPKGA"
     gene            1984..>2562
                     /locus_tag="QF359_11825"
     CDS             1984..>2562
                     /locus_tag="QF359_11825"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO87642.1"
                     /translation="MNLAILRTPRGIYNSILILLCIFMPFIAPVIGQEFFTDVFARIM
                     IMAIAAISLNMIMGYGGMISFGHAVFIGLGGYTVGIFASHGIESAYIQWPVGILVSGI
                     FALIIGAISLRTRGVYFIMITLAFAQMIYFLSVSVEKYGSDDGLTIEARSDFGISFFD
                     LNDALTMYYSVFVLLVGCLYLSYRIVNSRFGRV"
BASE COUNT          622 a          540 c          610 g          790 t
ORIGIN      
        1 cggtctcaaa cccaatattg gtaagcaaaa aaccgaaaag cttatcaaaa aagacaaagt
       61 tgactttatg actggcttta tctggtctca tgtaatgggt gcgtctgcgc cggttgccct
      121 gaaagcagga aaaatcttcg tcagcgctaa tgccgggcat tctctttatg ccggtaaaaa
      181 atgccataaa aacttcttta acgccgcttg ggaaaatagc caaaacccca tggcaatggg
      241 ctctttgctt aaccgtcgcg gtgtgaaaaa actttatgtg ctgtctttaa actatgccgc
      301 tggcaagcaa atggttgacg gtgtcgagcg tacatttaag ggcaatattg tcggtaaaga
      361 tttggttccg ttgagccaca aagactggtc tgccgaaatc gctaaagtta aagctgccaa
      421 accggatgga gtttttgtat tctatccagg ttcttggggg ccgaaattct ttacccaata
      481 caaacaagct ggattggata aaacaacacc gctttacagt gtattttccg ttgatggagc
      541 caatctaccg gttttccaaa aatacaaaat gaagcatctc attgggacgt ttaatacaat
      601 gttctgggca ccggatttgg ataatgccac caataaacgt tttgttgcgg attttggcaa
      661 aaaatacaaa ggtcaaatcc cttcgcatta tgctgcccaa gcctatgata gcttgatgtt
      721 gattgctgct ggtgtaaaag ctgccggtgg ggatgccaaa aatatcgatg ctgtgcgcaa
      781 aggtatggaa gcggcggact tcccatcagt tcggggtaaa attaagtttg gtaagaacca
      841 tttcccgatt caaaactttt attcccgcca agtggttaat aaagacggca aatggcaatt
      901 atctgttctt gatacagttg ttaaagatca tgcaccagtg atgtctaatg agtgcaaact
      961 ctaatcaatc gggttataaa gtaacagtgt tgcggggacg catcagcgtc cccgcaatta
     1021 gtttgctcac taattaacga agaaattaaa tggattacgt tcttcttgcc gaacagtttt
     1081 ttaatggctt ccagctggga ataatattat tcttggtggc agctggctta acgctgattt
     1141 tcggcataat ggatctggtt aatctggctc atggtacgct ttacatgttc ggtgcatttt
     1201 ttgctgcgac atttgtgctg ctcaccgatt ctttgatttt agggatgata atcgctctgc
     1261 cggttatgtt gatagcgggc attctgcttg agcttaccgt tctccgaacg ctctacgagc
     1321 gcaatcattt ggatcaagtt ttagcaactt tcggtctaat catctttttc aacgaatttt
     1381 ttctgatcgc ttggggcccc gaaggaacgg gcatcaactt gccaccctat ctttccggca
     1441 caatatcatt gccaggcggt atcacagtgc cagactaccg catggtgatt attgtcagtg
     1501 gcctgctggt tgcgttattc ctatatatcc tggtgtcgaa aacacggatt ggcatgctca
     1561 tccgggccgg cgcttcaaac cgagaaatgg ttggtgcgct cggtattaat atcaagctgt
     1621 tgtttacctt agtgtttggt cttggagcag tgctcgccgg cttttccggc atgattatta
     1681 caccgattac ccaagccgaa agcggtatgg gtgaaagtat tttgatcctg gcatttgtcg
     1741 ttattgtgat cggcggcatt ggctcaatca aaggcgcctt tatcgccgca attttaaccg
     1801 gtctcattga tacgatgggc cggtctttca ttgacgtagc gctgttgcaa attatggata
     1861 cagtggcagc cgaaactgct ggcccggcca tttcatcgat gttgatttat attttgatgg
     1921 ccgtcatttt ggcgattaag ccgagcggat tgttcccgcc taaaggggcg tgaggaaact
     1981 gctatgaatt tagcaatact taggacgcca cgcggaattt ataattccat tcttatttta
     2041 ctttgtatct tcatgccgtt tattgcgcca gtgatcggac aggaattctt taccgacgtc
     2101 tttgcccgca tcatgattat ggcaatcgcc gccatcagtc ttaacatgat tatgggctat
     2161 ggcggcatga tcagctttgg ccacgcggta tttatcggac ttggtggtta taccgtcggt
     2221 atatttgctt cacacggtat tgagagcgct tatattcagt ggccggttgg aattctagtg
     2281 agcggtattt ttgctctgat aatcggtgcg attagcctca gaacccgtgg cgtctatttc
     2341 attatgatca ccctcgcttt tgcccaaatg atttattttc tgagtgtgag tgttgagaaa
     2401 tatggcagcg atgacggtct gacaattgaa gcccgtagcg attttggaat ttcattcttt
     2461 gacctcaacg atgccttgac catgtattat tcggtgtttg ttttgttggt gggctgtctc
     2521 tatcttagct accgtatcgt aaattcgcgt tttggccggg tg
//
LOCUS       DASCNL010000901         2220 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001848392, whole genome shotgun sequence.
ACCESSION   DASCNL010000901 DASCNL010000000
VERSION     DASCNL010000901.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001848392"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(426..650)
                     /gene="rpmE"
                     /locus_tag="QF359_11830"
     CDS             complement(426..650)
                     /gene="rpmE"
                     /locus_tag="QF359_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HJO87643.1"
                     /translation="MKKEIHPEYHEITVTMTDGTTFTTRSTWGAEGDTMKLDIDPKSH
                     PAWTGEHRLVDSGGQVAKFNKRFEGIGLKS"
     gene            complement(750..1925)
                     /locus_tag="QF359_11835"
     CDS             complement(750..1925)
                     /locus_tag="QF359_11835"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87644.1"
                     /translation="MFIIFILVFINLVGFGIVIPLLPFYGEHFGASPDEVTWLMAIYS
                     LTQFITAPIWGRYSDRFGRRPILLISLAGTVAAYVWLALAEDLQTLYWARALAGVTAG
                     SISAAFAYMADITTDKNRAKGMGLLGAAFGLGFIAGPAIGGILAGSDPATTNYQLPSY
                     VAALFSGTAFLAALFVLKESLSDELKAKIYSRTSGERWTLFVHTMKQPTIRLTIILTF
                     VSIFAFAGLEATFAMWSEREFGWGVEQNGYIFAFIGIISAVIQGTLIAPLSRRMGEIG
                     MVRQGFLALGIGLAALPFAENLPLLLFALVIIAYGFSISSPALNSLLSLNIPAEQQGG
                     ILGIGRSASTLARALGPAGAGYLFALIGRDWPFYIGALLMFIVLLMALKFETAPKQS"
BASE COUNT          666 a          508 c          503 g          543 t
ORIGIN      
        1 tatgggaaat gttggttaag aaattaaatt ggcaatttaa caaccccaaa ccgcaagctc
       61 aattaagaca aataaaatag tgggttaaac tatatttgaa ctagttaact aggtcagctc
      121 ctaaattatt tttaaaaaat gaaattgatc tcttgaccaa atgaactggt cttgggtaca
      181 tttcctccgc atttttaaac gggagagttt aacagggaat gcattaattg gggcaaccgg
      241 aaacggtgtc ccaatttttt tagttttgag aattattgaa agagctgacc catctaacgc
      301 catttaggtg ttatcatagg ggcaataaga aagagccaat taagctaaat aggtgaaaat
      361 attaaaaaac gccaccgaaa caaggtgacg tttataaagc acaatcaaaa ttaattgatt
      421 gaattttagc ttttaagccc aataccctca aagcgcttgt taaatttagc aacttggcca
      481 ccgctatcaa ccaaacgatg ctcgccggtc catgctgggt gggatttggg atcaatatca
      541 agtttcatag tgtcaccttc agcaccccaa gtagaacgcg tggtaaaggt ggtgccatct
      601 gtcatagtga cagtgatctc atgatattct gggtgaattt cttttttcat cacttatgct
      661 ccgccgaatg tggcgcacta tatagcgaaa ctgcctttaa agcgcaagtc cggaaatagc
      721 tatatattat gtttatcaac acataattat caggactgtt ttggtgctgt ctcaaatttt
      781 aaggccatta acagcactat aaacatgagc aatgcaccga tataaaaggg ccaatcccga
      841 ccgatcaggg caaacagata gccggcacct gccggaccaa gagcgcgggc caatgtcgaa
      901 gcagatctgc cgatccccaa tatgccgcct tgctgttcag ccggaatatt taatgacagc
      961 aaactattta gtgccggtga ggatatgctg aagccgtagg cgatgattac caaggcgaat
     1021 aacagcaacg gcagattctc ggcgaaaggc aaggcggcga ggcctatccc gagcgccagg
     1081 aacccctgtc tgaccatacc aatctctccc atgcggcgcg atagtggggc gattaaagtg
     1141 ccttgaataa cggcgctgat gattccgata aaagcaaaaa tataaccgtt ttgctcaact
     1201 ccccagccaa actcacgttc ggaccacatc gcaaatgttg cttcaagacc ggcaaaggca
     1261 aaaattgaaa caaaggtcaa tattattgtc aggcgaatgg tcggctgctt cattgtatgg
     1321 acaaaaagcg tccatctttc acccgatgtc cggctgtaaa ttttggcttt taactcatct
     1381 gacaaagatt cttttaagac aaagagtgcg gcgagaaagg cagtgcctga aaaaagagcc
     1441 gcgacataag aaggtagttg atagttcgtt gttgctggat cactgccagc cagtatgccg
     1501 ccaattgccg gtccggctat gaagccaagt ccaaaagcgg cacctagcaa acccatgcct
     1561 tttgcccgat ttttgtctgt cgtgatgtct gccatatagg caaaagctgc cgagatgctg
     1621 ccggctgtca ctccggcaag agcgcgcgcc caatagagcg tctgcaaatc ttcggcgaga
     1681 gccagccaca catatgcggc aacggtgcca gccaaactaa tcagcaatat ggggcggcgg
     1741 ccaaaacggt cgctgtagcg cccccagata ggtgcggtaa taaactgggt caaggaatag
     1801 attgccatca accaggtgac ttcatccggc gacgcgccaa aatgctcgcc gtaaaacggc
     1861 aacaggggaa taacaatgcc gaagccaacg agattaatga aaacaaggat aaaaatgata
     1921 aacataaagt atgcgcattc ctcggcggat aggagtagta tgctaatagc tagcccaggt
     1981 ccaactaaca agcgttatac tactggcgca cttaacgggt atttttgaac tcttccatta
     2041 gtttcgattt tatcgcttcg ttgatgatga agtttccaat ccatctgatg cttcagccac
     2101 tgagtttttc ctcaaaaacc tggattcgtt tttcgcagcc gtaggcctgg tcgagtattt
     2161 tgaccagtcg atatccctaa tgagccccag accccaatgg cagagagctg ccattcaata
//
LOCUS       DASCNL010000902         2496 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001849363, whole genome shotgun sequence.
ACCESSION   DASCNL010000902 DASCNL010000000
VERSION     DASCNL010000902.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001849363"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..792
                     /locus_tag="QF359_11840"
     CDS             <1..792
                     /locus_tag="QF359_11840"
                     /inference="COORDINATES: protein motif:HMM:NF012894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HJO87645.1"
                     /translation="RAYKKFAISEHDDMVDLIDGAHFGEKAQQAFANQAVAPENVADW
                     WLTKDQQEMFKGARERLVHILDHHSKVQLPKVAAAAQVNFDCWIEQREENWQLDHIAK
                     CRRGFYAAVERLEELASLARSRYLPVANKSQVVPARQTLISPRSVHETRTYTLHFSFD
                     KTAIDKTGKIQIDRVFEAYQAGAPVAILLAGHADRAGKKPYNLDLSRRRSETVRRALI
                     ERGIPVQMIAAHAFGETRPKIATADGFKEPANRRVEITIGPAPAL"
     gene            996..1280
                     /gene="apaG"
                     /locus_tag="QF359_11845"
     CDS             996..1280
                     /gene="apaG"
                     /locus_tag="QF359_11845"
                     /inference="COORDINATES: protein motif:HMM:NF003967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HJO87646.1"
                     /translation="MENQGDDRVQLMRRHWHITDSLGLVHEARGEGVVGEQPVLEPGE
                     SFEYTSGTPLATPSSFMVGSYQMIDEEGKNFSVSIPAFLLDSPLNLTLIN"
     gene            1456..2055
                     /gene="folE"
                     /locus_tag="QF359_11850"
     CDS             1456..2055
                     /gene="folE"
                     /locus_tag="QF359_11850"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HJO87647.1"
                     /translation="MTSNNKPSREEAEAAVRVLLQWAGDDPSRDGLISTPARVVRAYE
                     EYFSGYDDDPVKILGRSFDETEGYDEVVVLKDIPFASHCEHHIAPILGKVHIAYLPKT
                     RVVGISKLARLVESYGRRLQIQEKMTAQIANTLNEVLDPLGVAVVIEAAHECMTTRGI
                     DKPGVNMVTSTMLGAFRDNPSTRREFMAIIGNPKNGHYG"
     gene            2186..>2496
                     /locus_tag="QF359_11855"
     CDS             2186..>2496
                     /locus_tag="QF359_11855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkH"
                     /protein_id="HJO87648.1"
                     /translation="MIDFRPIFLILGILLTILAVMMIVPAIADIIAGNPDWQVFAVAA
                     GVTLFIGVSLALTSRAGGASLSVRQAFILTTMSWIALTAFASLPFAFSQLDLSITDAF
                     F"
BASE COUNT          649 a          575 c          634 g          638 t
ORIGIN      
        1 cgcgcttaca agaaatttgc catttctgaa catgatgaca tggtggattt aatcgatggc
       61 gcgcattttg gagagaaagc acagcaggct tttgccaacc aagccgtggc tccggaaaat
      121 gtagcagatt ggtggttgac caaggatcaa caagagatgt ttaaaggtgc acgtgaacgg
      181 ctcgtgcata ttcttgacca ccattctaaa gttcaactgc ccaaagttgc cgccgcagcg
      241 caggttaatt ttgactgctg gatcgagcag agggaagaaa actggcagct cgatcatatc
      301 gccaaatgcc ggcgcggctt ttatgcagcg gtcgagcggc tggaagaatt ggcttccctg
      361 gcacggagcc gctatttacc ggtggccaat aaatctcaag ttgtacccgc ccgtcaaacc
      421 ttgatctcgc cacgttcagt tcatgaaacg cgaacctaca cgctgcattt ttcatttgat
      481 aagacggcaa tagataaaac aggaaaaatt cagattgatc gagtcttcga agcctatcag
      541 gccggtgcac cggtagcgat attattagcc ggtcatgctg atcgcgccgg taaaaaacct
      601 tacaatctgg atctatcccg gcggcgctcc gaaaccgtgc gtcgcgccct aatcgagcgt
      661 ggtatcccgg tacagatgat tgccgcccac gctttcggcg aaacgcgtcc gaaaatagca
      721 acggccgatg gcttcaaaga accagctaac cggagagtgg aaattacgat tgggccggca
      781 ccggcgcttt aaggtaaaac gggcgagtgc caaaaaaatt atttgtattc cgcgaatcgt
      841 gctaaacaaa aatgagctgt ttataattgt tagtcgatgg atcaaacatg tactcggaag
      901 tgaccaactc aatcaagata tctgtcgacc ctacttttat ggaagattga tctgagtctg
      961 aggattttca ctacgtttgg gcttaacaca tccgtatcga aaaccaaggt gacgacaggg
     1021 tgcagcttat gcggcgccac tggcacatca ccgattccct aggcctggtc catgaagcgc
     1081 gcggtgaagg tgttgttggt gaacagcccg tgttggaacc gggcgaaagt tttgaatata
     1141 ccagcggcac accacttgcc acaccatcca gctttatggt cggcagctat caaatgattg
     1201 acgaagaggg taaaaatttt agtgtatcca tacccgcgtt tttgcttgat tcaccactta
     1261 atttaactct cataaactaa tatttcatca acaatttgaa tggcttatct cttcgggctg
     1321 gtgcaagcgg aaaaaatcgc tatgttatgc ccgtttcgga attacctaag aatgacgcgc
     1381 ccgctaattg gtgcaaattg ggggtaataa tggctcgccg gtggcgggtc atttagtcaa
     1441 tgagaggaaa agcaagtgac cagtaataac aagccgagcc gggaagaagc tgaagcagca
     1501 gtccgcgtct tgttgcaatg ggccggtgat gatccgagcc gtgacggctt aatcagtacc
     1561 ccggcacgcg ttgtgcgcgc ttatgaagag tatttcagcg gctatgacga tgatccggtt
     1621 aaaattcttg gccgcagttt tgatgaaacc gaagggtatg acgaagtcgt tgtgctcaaa
     1681 gacattccgt ttgcctcgca ctgcgaacat cacattgcac caattttggg taaagttcac
     1741 attgcctatc tgccaaaaac ccgagttgtt ggcattagta aattggcccg gctggtcgaa
     1801 agttatggcc ggcgattgca aattcaagaa aaaatgacag cccagattgc caatacattg
     1861 aatgaggttt tggacccgct tggtgttgcc gtggtaatcg aagcggcgca tgaatgcatg
     1921 acgacacgag gtatcgataa gcccggtgtc aatatggtaa ccagcaccat gttgggtgct
     1981 tttcgtgata atccgtcgac ccggcgcgaa tttatggcaa ttattgggaa tcccaaaaat
     2041 ggtcattatg gctaatatct aattgggtct ttggcctgct tcagggccag cactagaaag
     2101 tataagacga ccaaaaataa ttggccattt ccatatgaat ggagcatcgt aaataaaaac
     2161 ggtgaaaact taggaccaat ttgacgtgat agacttccgc cccatatttc taatccttgg
     2221 gattttgctg acaatattgg ccgttatgat gatcgtccca gcgattgccg atatcattgc
     2281 cggtaatccg gattggcagg tttttgccgt ggccgccggg gttactttat tcatcggggt
     2341 ctctcttgct ttaaccagcc gtgcgggtgg cgccagtctc tcggtgcgtc aggcttttat
     2401 tttaacgaca atgagttgga tcgcgttgac cgcttttgcc tcattgccgt ttgcgttctc
     2461 gcagcttgat ctcagcatta ccgatgcatt ctttga
//
LOCUS       DASCNL010000903         1193 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001850306, whole genome shotgun sequence.
ACCESSION   DASCNL010000903 DASCNL010000000
VERSION     DASCNL010000903.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001850306"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1100
                     /locus_tag="QF359_11860"
     CDS             <1..1100
                     /locus_tag="QF359_11860"
                     /inference="COORDINATES: protein motif:HMM:NF022447.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2817 domain-containing protein"
                     /protein_id="HJO87649.1"
                     /translation="LKECKKMLSAYSESYSQARQMFLAVCENRKLEYFSVINPNLGPD
                     GEELAVDVALLGDPAAENILYVTSGVHGVEGYFGSAVLIGQLSSGFMPPKGVRCVLVH
                     AVNPWGFAHCRRFTEENVDLNRNFWVERNFSAENKQYGLVKDWAEIADLSEQAIETAE
                     TAGKQLVEDIGIPRMKIALAGGQDINPQGLFFVGHGATWARVAFEYIVYRTLGQIKIA
                     FHMDLHTGLGPTGYADILSHYAENDERLETLVTYLGEAASSQRRITEIGQELRGALGD
                     GLNRILSRRNVNFLGVSIEVGTQELYLSLDALRYECALHFDQNPTHPRAATIKQNLRD
                     AFYVTTDAWKSMAYDQTDEYLRGAIRYLSDQ"
BASE COUNT          301 a          259 c          338 g          295 t
ORIGIN      
        1 tattgaagga atgtaaaaaa atgttgagtg cgtattcaga gagttacagc caagctaggc
       61 aaatgtttct ggccgtatgt gaaaaccgga aactggaata tttttcagtg ataaatccaa
      121 acctagggcc ggacggggaa gaattggcgg tggatgttgc tctgctcggt gatcctgccg
      181 ccgaaaacat attatatgtg acgtcggggg ttcatggggt cgagggatat ttcggatcgg
      241 ccgtccttat cggtcagctt agttcaggtt tcatgccacc caagggtgtg cggtgcgtac
      301 tggttcatgc cgtaaatcct tgggggtttg cgcattgtcg gcggtttacg gaagaaaatg
      361 tcgacttgaa ccgcaatttc tgggtagagc gtaatttttc ggcggaaaat aagcaatatg
      421 gtctggtcaa ggattgggcc gaaatagccg atctttcaga acaggcaatc gaaacagcgg
      481 aaacagctgg caagcaattg gttgaagata tcggtatccc acgtatgaaa attgccctcg
      541 ccggcggaca ggatataaac cctcaaggcc tcttttttgt tggccatggg gccacctggg
      601 cgcgggtggc tttcgaatat atcgtttatc gaaccttagg tcagataaaa atcgcttttc
      661 atatggattt gcataccggc ttgggtccaa ctggctatgc cgatatttta agccactacg
      721 ccgaaaatga tgagaggctg gaaaccttgg tcacctacct gggtgaagcg gcgagcagcc
      781 agcggcggat tacggaaata gggcaagaat tgcgcggagc gcttggcgat ggcctcaatc
      841 ggatcctcag ccgccgcaat gtgaactttt tgggggttag tattgaggtg gggacccagg
      901 agttgtatct gtcgctcgac gcgctaagat acgagtgcgc cctgcatttt gaccagaacc
      961 caacgcatcc cagagccgcg accatcaagc aaaatctgcg tgatgcattt tatgttacaa
     1021 ccgatgcttg gaagtccatg gcctatgatc agaccgatga gtatttgaga ggggcgataa
     1081 ggtatctgtc ggaccaataa tttgcttcga gccgttcctt acgggtctca acggccggcg
     1141 ccaaatcggg aatatcgaaa atactgggta actatatcgc cagtaactta gcc
//
LOCUS       DASCNL010000904         1960 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001853514, whole genome shotgun sequence.
ACCESSION   DASCNL010000904 DASCNL010000000
VERSION     DASCNL010000904.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001853514"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="QF359_11865"
     CDS             complement(<1..462)
                     /locus_tag="QF359_11865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HJO87650.1"
                     /translation="MIDIAYADWLELVFRWLHLIAGIAWIGSSFYFIFLDLSLRNSDT
                     LPMGVKGASWNVHGGGFYFMQKYTVAPDTMPEELHWFKWEAYFTWISGFSLMSIIYYW
                     GAESFLIDKEVMDLTQWQAIGISIGAFIAGWVIYDQLCKSPIGKNVVALSTL"
     gene            complement(487..840)
                     /gene="uraH"
                     /locus_tag="QF359_11870"
     CDS             complement(487..840)
                     /gene="uraH"
                     /locus_tag="QF359_11870"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HJO87651.1"
                     /translation="MGYLTTHVLDSAHGCPAAGVRIELYRISGSDGEHVVEATTNNDG
                     RCDNPILLESDFAVGVYELRFHIGDYYRGKGIDLSSPAFLDVVPVRFGIASPEDHYHV
                     PLLVSPYSYSTYRGS"
     gene            1141..1842
                     /locus_tag="QF359_11875"
     CDS             1141..1842
                     /locus_tag="QF359_11875"
                     /inference="COORDINATES: protein motif:HMM:NF019349.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HJO87652.1"
                     /translation="MNEQAETYDDWIYDQVFGAVLEQRLIPGAKLKESELCEVFGVSR
                     TIIRRILLRLSLDKVVELRPNKGAVIATPAAEDVRQIFAARRLLEIGIIEDTCKHCTT
                     ADTQVLKDIVTRENAAIQSGDRSGAIRLAGEFHVQLTGVARNKPIQELLRQLVAQSSL
                     ALALYEAPGHLLCVDDDHINIVNAVAGAEAVKCRDLMAHHLEKAEAEMRLDAPQDNND
                     LKSVFAEVIEARATA"
BASE COUNT          568 a          469 c          415 g          508 t
ORIGIN      
        1 aagtgtgctt agcgcaacga catttttacc tataggtgat ttgcaaagct gatcatagat
       61 cacccaacca gcgataaagg ctccgatact aatcccgatc gcctgccatt gagtgaggtc
      121 cattacttct ttgtcgatca ggaaactttc tgctccccaa taataaatga tgctcatcaa
      181 cgaaaagccg gatatccagg taaaataggc ttcccactta aaccaatgca gctcctcagg
      241 catggtgtcc ggagcaaccg tatatttctg cataaaataa aagccgccac catggacgtt
      301 ccaagaagca cccttaacac ccattggcaa cgtatcgctg ttacgcagac tcaaatccaa
      361 aaaaatgaag taaaaggatg atccaatcca agcgatacct gcgataagat gcaaccaccg
      421 aaacacgagt tctagccagt cagcatatgc gatatcgatc atgaagaaag ttaccttttg
      481 tttcgactag gagccgcgat aggtggaata agaatagggt gataccaaaa gcggcacatg
      541 ataatgatct tccggcgatg ctataccgaa tctaaccggc acaacatcca aaaacgccgg
      601 cgacgacaga tcaatgcctt tgcctcgata atagtcacca atatgaaacc gcagttcata
      661 aacgccgacg gcaaagtcac tctctaacag tattggattg tcacaccggc catcattatt
      721 ggtcgtggct tcaactacat gctcaccatc agaaccggaa attcggtaca attcgatgcg
      781 cacaccagct gccgggcaac catgtgccga atccaggaca tgtgtggtta aataacccat
      841 gttcgtaaaa acctccaata tattgtatcc attttagtat tattattgtt gtcaatatag
      901 aaaacatcgt actgcatatc ccaactggga tgcaagaatt atttgtttag ttttgctatt
      961 tttctgggct tttttgcaga taattattaa tcagaatccc atcgaattta aatgataaat
     1021 ttctttacat ctctctatca tactgcctaa ttgacctttt tattgatttt tctgtatcta
     1081 tttaatatta ttttcgtata caataacatc tcctaataaa tttatgtggc gcagttataa
     1141 atgaatgaac aagcagaaac atatgacgat tggatctatg atcaggtctt tggtgcggtg
     1201 ctggaacagc ggcttatccc cggcgcaaaa ctaaaggaaa gtgagttgtg cgaggttttt
     1261 ggcgttagcc gtacgatcat tcgccggatt ttactgcggc tgtctctcga taaagttgtc
     1321 gaacttcggc ccaataaagg cgctgttata gcgacacctg cagcagagga tgtccgacaa
     1381 atttttgccg cccggcgctt gctggaaatc ggcatcattg aagacacctg caagcattgt
     1441 accacagctg atacgcaagt gctcaaagat atcgtcaccc gggaaaacgc tgccattcaa
     1501 tccggcgacc gtagtggcgc catcaggctt gcgggcgaat tccatgtcca gctcaccggc
     1561 gtcgctcgca acaaaccgat ccaggaatta ctgcgccaat tggtggccca gtcttccttg
     1621 gctttagccc tttacgaagc gcctggacat ctgctttgcg ttgatgatga ccacatcaat
     1681 atcgtcaatg cggtggccgg tgccgaagct gtaaaatgcc gtgatttaat ggcgcatcat
     1741 ctcgaaaaag cagaagcaga aatgcgtttg gacgcaccac aagataataa tgacctcaaa
     1801 tcagtattcg ctgaagtcat cgaagcccgc gcaactgctt gagaaggata aacaaatgtc
     1861 tgaaggcttt attgctgccg attttaaacg ttatccccgt gatcttattg gatatggcgc
     1921 agataaaccg cacgctgact ggccagatgg tgcgcgcatc
//
LOCUS       DASCNL010000905         2746 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001854175, whole genome shotgun sequence.
ACCESSION   DASCNL010000905 DASCNL010000000
VERSION     DASCNL010000905.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001854175"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="QF359_11880"
     CDS             complement(<1..326)
                     /locus_tag="QF359_11880"
                     /inference="COORDINATES: protein motif:HMM:NF013086.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO87653.1"
                     /translation="MAKKIPSEIETDIVIIGGGIAGIFAAVTARQKGFEVTLVDKGSP
                     GNSGATPFADTFCVFDEELGHQRQDWIDTVSFNGEYLNNRAWLEKMMDHSKERFHDLK
                     EWGVLD"
     gene            complement(451..1656)
                     /locus_tag="QF359_11885"
     CDS             complement(451..1656)
                     /locus_tag="QF359_11885"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HJO87654.1"
                     /translation="MPITAQIPYGAYWSTPNVKWQGSFQHLHAIEFAAYVAKDELKKR
                     DIEPTSFDYGVLGLTINQRQSFNGLPWFTNMIGAPEVGGPLINQVCATGVRCVENATM
                     EIEGGMSGLALVATCDRTSNGPQLYYPEPSGIGGTGKHENQLLDNMGDDPFGHHSMLQ
                     TAENVAARHGISMDEQHDVAARRGEQYQDAVADDSAFLKRFMTLPFDVPSGNYKKTVG
                     TLEGDEGVYPPNREKLNNLKPVLEGGTVTFGGQTHPADGSACMVVTTPDRAKEMSRDK
                     NIEIQIKGFGQARAELGYMPEAPVPASQNAINMAGWKLDDVDAIKTHNPFAVNDCYFA
                     KETGWDVNKMNNYGCTLVWGHTQAAMGTRGIIELIEELTIRGGGKGVFTGCAAGDTGM
                     AVAVEVTGS"
     gene            complement(1700..2461)
                     /locus_tag="QF359_11890"
     CDS             complement(1700..2461)
                     /locus_tag="QF359_11890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87655.1"
                     /translation="MDVNGHAAIITGGASGLGAATARMLAEKGAKVAIFDLNEELGNA
                     VAEETGGIFASCDVAGEASAQAAIDSAKDAHGAARLLVNCAGIGFASRVVGRKGAHDY
                     GLFTKVVTVNLIGTFNVTRLFAVDATQLDPLEDNERGVVINTASVAAFDGQIGQAAYA
                     ASKGGIHSMTLPIAREFADRGVRICTIAPGILKTPLMDILPEEVQQSLSDSIPFPRRL
                     GHAEEYAALALHIFENRYLNGETIRLDGAIRMAAK"
     gene            complement(2489..>2746)
                     /locus_tag="QF359_11895"
     CDS             complement(2489..>2746)
                     /locus_tag="QF359_11895"
                     /inference="COORDINATES: protein motif:HMM:NF024591.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87656.1"
                     /translation="VLFAHPDIQEAAAVGVIDKYSGEAIQAFVVLADGVNPTSEELID
                     YCQGKLAKFKVPSEIHIIELLPKTPAAKIDKLALKKSLEQD"
BASE COUNT          688 a          750 c          603 g          705 t
ORIGIN      
        1 tcatccagta ccccccattc tttgaggtcg tggaatcgct cttttgaatg atccatcatt
       61 ttttctaacc aggcgcgatt gttgagatac tcaccattga aactgaccgt atcgatccaa
      121 tcctggcgct ggtggccgag ttcttcatca aaaacacaaa aagtgtcggc aaaaggcgtt
      181 gcgccagagt tacccggtga gcctttgtcg accagcgtta cctcaaaacc cttttgccgc
      241 gcagtaacag ctgcaaaaat gccggcaatg ccaccgccga taataacgat atcggtttcg
      301 atttcgcttg gtatcttttt cgccatgcaa attacccttc cccaagatat cagcctcaac
      361 ataagaaatg tgacgagcgt taccttgacg aaggtcaatt gcgtgatgct ttgaccgaat
      421 atgcgatgcc agaaaggtgc taattaatac ctatgatcct gtcacttcaa cggcaacagc
      481 cattccagta tctccagcag cacagccagt aaacacgcct ttaccgccgc cccggatggt
      541 taattcttca atcaactcaa tgataccgcg ggtacccata gccgcctggg tatgacccca
      601 aaccagcgtg cagccgtaat tgttcatctt attgacatcc cagccagttt ctttggcaaa
      661 ataacaatca tttacggcga aaggattatg cgtttttatc gcatcaacat catcgagctt
      721 ccagcctgcc atgttgatag cattttgcga ggccggaact ggcgcctcgg gcatatagcc
      781 gagctctgcc cgtgcttggc caaatccttt gatttgaatt tcgatgtttt tatcgcggct
      841 catttccttg gcccgatccg gcgttgttac gaccatgcaa gcactgccat ccgccgggtg
      901 tgtttgacct ccaaaggtaa cggtaccacc ttcaagcacc ggctttaaat tattcaattt
      961 ttcccggttg ggcggataaa cgccttcatc gccctcaagc gtgcccacag tttttttgta
     1021 attgccggat ggaacatcaa agggcaaagt cataaagcgc ttcaagaatg ccgaatcatc
     1081 cgccaccgca tcctgatatt gctcgccgcg ccgcgccgcg acgtcatgct gctcatccat
     1141 ggaaatgccg tgacgggcag caacattctc agccgtttgc agcatcgagt gatggccgaa
     1201 aggatcgtca cccatattat caagcaattg attttcatgc ttgccggtac cgccaatgcc
     1261 ggatggctcc ggataatata gctgtggtcc attcgatgtg cgatcacaag tggcgaccaa
     1321 agcaagaccc gacataccgc cttcaatttc cattgtcgca ttctcgacac aacgaacacc
     1381 agtggcacag acttgattga tgagcggccc accgacttcc ggcgccccga tcatattggt
     1441 gaaccacggc aaaccgttaa acgactggcg ctgattaatg gtcaggccga ggacaccata
     1501 atcaaaagat gttggctcaa tatcgcgttt tttcagttca tctttagcaa catatgcagc
     1561 gaattcgatg gcatgcaaat gctgaaagga gccctgccat tttacgttcg gcgtactcca
     1621 atacgctccg tatgggattt gcgcagttat cggcataatc taatttccct cttatgagtt
     1681 tatttttttt gcataacgct tatttagcgg ccattcgaat ggcgccatcg aggcggattg
     1741 tttcaccatt caaatagcga ttttcgaata tatgcaacgc aagtgcggca tattcttcgg
     1801 catggccaag ccggcgtggg aacggaatgc tgtcactgag tgattgctga acctcttccg
     1861 gcaaaatatc catcaaaggc gttttcaaaa tacccggtgc gatggtgcaa atccgcacgc
     1921 cccgatcagc aaattctcga gcaatcggca gggtcatact gtggatgccg ccttttgaag
     1981 cagcataggc tgcttgccca atttggccat caaatgctgc gaccgatgcg gtattgataa
     2041 ccacacctct ttcattatcc tcaagcgggt caagttgcgt cgcatcgaca gcaaataagc
     2101 gggtgacatt aaaagtgccg attaaattga ccgtcacgac ttttgtgaat aatccgtagt
     2161 catgagcacc tttgcggccg acgacacgcg acgcaaagcc gataccggcg caattcacca
     2221 acaaccgggc ggcaccatga gcgtctttgg cgctatctat tgcagcctga gcactggctt
     2281 cacccgccac atcgcaggaa gcaaaaatac caccagtttc ctcggcgacc gcattgccaa
     2341 gctcttcatt aagatcaaaa atagcaacct ttgcgccttt ttccgccaac attcgcgccg
     2401 tcgcggcacc caatcctgat gcgccaccgg tgataatcgc agcgtgtcca tttacgtcca
     2461 tttccaacta actcctattt ataaaagctc aatcctgctc caaggatttt tttaaggcca
     2521 gcttatcaat ttttgccgct ggtgtttttg gcaacaattc aatgatatga atttctgaag
     2581 gtactttaaa tttcgccaat ttgccttggc aatagtcaat tagctcctca gatgtggggt
     2641 ttaccccatc agcgaggaca acaaaagcct gaattgcctc accgctatat ttgtctatta
     2701 cgccaacagc ggcggcttcc tgaatgtcgg gatgagcaaa cagcac
//
LOCUS       DASCNL010000906         2893 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001856585, whole genome shotgun sequence.
ACCESSION   DASCNL010000906 DASCNL010000000
VERSION     DASCNL010000906.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001856585"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="QF359_11900"
     CDS             complement(<1..368)
                     /locus_tag="QF359_11900"
                     /inference="COORDINATES: protein motif:HMM:NF017319.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87657.1"
                     /translation="MKQIRIIILILALVLSTTISAAKKTSPTKVIEEFHAVLLAVMKE
                     AKSLRAKDRYAKLEPAIVEAFDLGFMIRVASGTVWRKASEEHRSQLTEAFRRMSIATY
                     TFRFRDYSGQRFETLKSSEGP"
     gene            complement(381..1187)
                     /locus_tag="QF359_11905"
     CDS             complement(381..1187)
                     /locus_tag="QF359_11905"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HJO87658.1"
                     /translation="MSSLERLLSILDLYSEAEPIWTLEEITRETGYARSTAYRYVKEL
                     CDSGLLISIGKGAHVLGPRFIEFDRLIRNTDPLLMAAQNIMPGLHQEFGESVLLLSSL
                     YGEKVLCIHQEPLISDFIISYARGRPMPLFYGATAKIILANLPERRLVKLFLNHRIEI
                     AKAGLGEEWEDFKEHLAEMRRLGYCISKSEVDLGVVGVGTAIFADNKTVIGSLTHVVQ
                     GEGGDFDEMISDRLIDGCNRISIEIAKILDAHDDLIDSYSPVIPFKKSGS"
     gene            1356..1814
                     /gene="msrA"
                     /locus_tag="QF359_11910"
     CDS             1356..1814
                     /gene="msrA"
                     /locus_tag="QF359_11910"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HJO87659.1"
                     /translation="MEKATFGAGCFWGIEHAFRKVAGVIEAPVGYAGGTTPDPTYEQV
                     CSGQTGHAEVVEVEFDPAKVSYEELLEVFWTIHDPTTLNRQGPDIGTQYRSAIYFHSA
                     EQEQAAKDSIAALENGDRFRNPIVTELSPIDTFYMGEDYHQHYFKKQGQH"
     gene            1816..1971
                     /locus_tag="QF359_11915"
     CDS             1816..1971
                     /locus_tag="QF359_11915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87660.1"
                     /translation="MDYPMADAEIKIIPLDSATQLDDTAADNVFVIGSQAITGPALGP
                     PRLVSGQ"
     gene            2042..2536
                     /locus_tag="QF359_11920"
     CDS             2042..2536
                     /locus_tag="QF359_11920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87661.1"
                     /translation="MAADCIDSQTASISDGEDMLARGVISYFNILTEELGVEAGQPCQ
                     EAATLLCKANQFTGEPDTSDEPLCHKLGKINGISVIGLDTMLLIQENDAGKIMLTGFH
                     GGLVGGVFLAGPPVALPSKPLFSTTPACVPISRAPTASLPLACKTFQPPPSAPCQPAY
                     QMQL"
     gene            2707..>2893
                     /locus_tag="QF359_11925"
     CDS             2707..>2893
                     /locus_tag="QF359_11925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87662.1"
                     /translation="MTGRFNNKAFLVLILGTIILCISFGVRSSLGVYMKPISIDLGWG
                     REVFAFAVALQSLIWGIS"
BASE COUNT          762 a          727 c          674 g          730 t
ORIGIN      
        1 ggcccctcgc ttgatttaag cgtttcaaac cgctgaccgg aatagtccct aaatcgaaac
       61 gtgtaggtgg caatactcat ccgtcgaaag gcttcggtaa gttgacttct atgttcttca
      121 ctagctttac gccagacggt gcccgaggcc accctgatca taaaaccaag atcaaacgcc
      181 tcgacaatag ccggttccag ttttgcgtag cgatctttcg cccttaatga tttggcttcc
      241 ttcatcacgg ccaaaagaac agcatgaaac tcctcaataa ctttagtcgg ggaagttttt
      301 ttagctgcgc ttatagtcgt gcttaaaacc aaagcaagga tcaaaataat aatcctaatt
      361 tgcttcattc gggcaaagcc ttatgaaccg gattttttaa atggaataac cggcgaataa
      421 ctgtcgatta ggtcatcatg ggcatccaaa attttcgcaa tttcgatgga aatacgatta
      481 cagccatcaa tcaaacgatc tgaaatcatt tcatcaaaat ctccaccttc cccctgcaca
      541 acatgcgtaa ggctgccgat aactgttttg ttatcagcaa agatggcagt cccaacaccg
      601 acaacgccta aatcaacttc acttttggaa atgcaataac caagccgccg catctctgcc
      661 aaatgctctt tgaaatcctc ccattcttcg ccgaggccgg ccttggcaat ctcgatgcga
      721 tgattgagga acagcttcac caaccggcgc tcaggtagat tggcgagaat aattttggcg
      781 gtggcaccat aaaacaacgg catcgggcga ccccgcgcat aactgataat aaaatcggaa
      841 attagtggtt cctggtggat acaaagaact ttttcgccat aaaggctact caacagcaac
      901 acactttcgc caaattcctg atgaaggccc ggcataatat tttgcgccgc cattagcaat
      961 ggatcggtgt tccggattag ccggtcaaac tcgataaagc ggggccccag aacatgcgcg
     1021 cctttgccga tagagatcaa cagaccggaa tcgcagagct ccttaacata acggtaggcg
     1081 gtcgagcgcg catagccggt ctcacgcgtg atttcctcaa gcgtccagat cggttccgct
     1141 tcggaataga gatcaagtat gcttaacagg cgttccaggc tagacatcag attccaagat
     1201 tttgtttaat ggtattctag cagacttttc aactctctgc acgttttgca acaatcgggt
     1261 cgcgttaggc ggtcggtttg taatcgtgta atttgacatt caacatcaat taattacctt
     1321 tcaaacaaca gggaacaata aaggatttta tagcaatgga aaaagcaact tttggcgccg
     1381 gttgtttttg gggcattgaa catgcttttc ggaaagtcgc gggtgttatt gaagcgccgg
     1441 tcggttatgc cggcggcaca acaccagacc cgacttatga gcaagtttgc agcggccaaa
     1501 cgggccatgc ggaagtcgtt gaggtagaat ttgatccggc taaagtctct tacgaagaac
     1561 tccttgaggt attctggacc atccacgatc ctacaacatt aaaccggcaa ggccccgata
     1621 tcggcaccca ataccgctcg gcgatttatt ttcattctgc tgagcaagaa caagcggcta
     1681 aggattctat agccgctttg gaaaacggcg atcggtttcg caatcctatc gtcaccgagc
     1741 tctccccgat tgatacattc tatatgggcg aggattatca ccagcactat ttcaaaaagc
     1801 agggccagca ctaaaatgga ttatccaatg gcagatgcag agatcaaaat tatcccactt
     1861 gatagcgcca cccaattgga tgatacggca gccgacaatg tctttgtcat tggctcacaa
     1921 gcgataacgg gtccagctct cgggccgcca aggctggtgt ccgggcagtg attttcatga
     1981 tacgggcgtc ggtaaggatg aagcgggact gtccgccctg ccctatttac aaaaactggg
     2041 catggctgcc gattgcattg actctcaaac tgcgtcgatt agtgacggcg aggacatgct
     2101 ggcccggggt gttattagtt actttaacat actcactgaa gagcttgggg tagaagctgg
     2161 gcaaccttgc caggaagccg ccacgctgtt gtgcaaagcc aatcaattca ccggtgaacc
     2221 tgacacctcc gatgaaccgc tgtgccataa attgggcaag attaacggca tcagcgtcat
     2281 tggcctcgat accatgctgc ttatccagga aaatgacgcc gggaagatca tgctgactgg
     2341 tttccacggt ggcctggttg gcggtgtttt tctcgctggc ccacccgtgg cattaccgtc
     2401 aaagccgcta ttttccacga cgccggcatg tgtcccgata tctcgagcac caaccgcctc
     2461 cctgcccttg gcttgcaaga cattccagcc gccaccgtca gcgccatgtc agcccgcata
     2521 tcagatgcaa ctttgatgta tgaaaccgga gaacttttga tggtcaacaa aaccgccgaa
     2581 aaattaggcg tggttatcgg tatgagcgct aaatatttct gcaaattaat tgcaaatagt
     2641 tagaggctgg cttaatccct tcacacctga taggccatta ggattggaat tatcgagggc
     2701 aatcgcatga ccggccgatt taacaacaaa gcctttttgg tgctaatttt aggcaccatc
     2761 atattgtgca tttcttttgg cgtgcgctcc agtctcggtg tttatatgaa accgattagt
     2821 atagatctcg gctggggccg tgaagtattt gcctttgccg tcgccttaca aagtctgatc
     2881 tggggaatat cta
//
LOCUS       DASCNL010000907         3079 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001858575, whole genome shotgun sequence.
ACCESSION   DASCNL010000907 DASCNL010000000
VERSION     DASCNL010000907.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3079)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001858575"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1660
                     /locus_tag="QF359_11930"
     CDS             <1..1660
                     /locus_tag="QF359_11930"
                     /inference="COORDINATES: protein motif:HMM:NF014585.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO87663.1"
                     /translation="FEGGLVAWAVVGGHQGESGSVSPGGFVPTATSRFEEGLHIPVMK
                     IGENFQLRQDVLDFLCASVRNPFILAADLKSRLATCKRIRDRIIRECERRGAPSLVGG
                     MRQILIRSEERARAHLVKLNDGIYRHVLFNDDMGTEEGLTRIPTTVYKEGDTLTMVVQ
                     GVSPENGKGPMHATWHLIRGSMGVYLFSYFFRGLQPNAGLLQAVKVLVEGPSIANSSA
                     HLAHGEGTSIAACVVQNLHVIGSKILFDSPYKEAVQSPHSRNISLYTFSGENARGYTC
                     MNFTGTVNASGQGGRVDGDGEHAVGFYWGPFTDSGEVEDIDSRLPHTVLSRAIGKNYH
                     GFGKNRGSAPLVEVSTSCSHKGCLMTSWGSADRLSHNPGIFGGYYGPPNPRFVIRNTD
                     LMERLQADEDLDIFSQFDLMNKQQLNGEYIMESSSTSTQQFAEGDVFAFSLGGGGGYG
                     DVLEREPESVLEDIQTNVLTKEVGETVYGVVFNSETGDVDVKKTDKKRASMKKNRLKQ
                     GKPFNEFVTGWLKKRPNEEIIQNYGNYPEPRVENYDKPFWGMYE"
     gene            1660..2580
                     /locus_tag="QF359_11935"
     CDS             1660..2580
                     /locus_tag="QF359_11935"
                     /inference="COORDINATES: protein motif:HMM:NF013381.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HJO87664.1"
                     /translation="MEKSLDQFIGEHDRGLYLPILFSLSMRLEHMVWQEIESDAALVA
                     FALRNGITAFNTNGVINWFDTWMEAEALGLNLSRDKNGQVLSVNGQINRDVDPEQFVK
                     NGQVSIAVDVAKRLSSELAERSVVFGYLTGGSTMAEKCFPQDLKQKLFAEDQPQDISD
                     DDKGLIDLVARCSLQMAREYCESGATALLLVEEIEPSKVILDAYEPLFNLANYYSIPV
                     LSLHREPPSKSTAAVLEKFGCFAMLNEKNDAEEGNVVLSESIFLSADGSDAELNNIVS
                     NQNRLITTYWDLPFNSKLERVAEIGRTMTN"
     gene            2606..>3079
                     /locus_tag="QF359_11940"
     CDS             2606..>3079
                     /locus_tag="QF359_11940"
                     /inference="COORDINATES: protein motif:HMM:NF017215.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HJO87665.1"
                     /translation="MYTIDIDVGGTFTDGYFTNGKEIKTAKVLTTPHDISECIGNCVV
                     FGAEAFGQPLKEFLRKNDVARVSTTVGTNLIIQAAGPKIGLLVTKGSEQTLYGDSSEG
                     LIGSYVAEDMIIGVEEEVDKDGSLKIKLDREEVLAAIRQLLDQGARMIVVSFRNAW"
BASE COUNT          806 a          681 c          813 g          779 t
ORIGIN      
        1 ctttgaggga gggcttgttg cctgggcggt agtcggcggt catcagggcg agagtggttc
       61 cgtcagtccc ggtggttttg ttccgacagc tacctccagg tttgaggaag gtctgcacat
      121 accggtaatg aaaatcggcg agaattttca gctccgccag gatgttctcg attttttgtg
      181 cgcctccgtg cgcaatcctt ttattcttgc cgcagatctg aaatctcgtc tagcgacttg
      241 taagcgtatt cgggatcgta ttatcaggga atgtgaacgc cgtggcgctc catcactagt
      301 tggaggcatg cgtcaaatac tgatccgatc cgaggaacgg gcccgcgccc atttggttaa
      361 gcttaacgac ggcatctacc ggcacgtttt gttcaatgat gatatgggca cagaggaagg
      421 acttacgcga attccgacga ccgtctataa ggaaggcgac actctgacca tggttgttca
      481 gggggtatcg ccggaaaacg gcaaaggccc aatgcatgcg acctggcatc ttattcgcgg
      541 ttccatggga gtttatcttt tctcctattt ttttcgcggc ttacagccaa acgccggtct
      601 tttgcaggcg gtcaaagtct tggtggaagg gccctcaata gccaattcaa gcgcccatct
      661 tgcacatggt gaaggcacct caattgccgc ttgtgtcgtt caaaatcttc acgtcatcgg
      721 ctcaaagatt ctctttgata gcccttacaa agaagcagta cagtcaccgc attcgcgaaa
      781 tatcagtctt tatactttct ctggtgaaaa tgcccgcggc tatacctgca tgaactttac
      841 cggaacggtt aacgcgtccg gccagggcgg ccgggttgac ggagatggcg aacatgccgt
      901 tggcttttac tggggtccat ttacggattc tggcgaagta gaagatattg actcacgctt
      961 gcctcatacg gttttgagcc gcgccattgg aaaaaattat cacggttttg gtaaaaaccg
     1021 gggcagtgct cctttggttg aggtttcaac gagttgcagc cacaaaggat gcctgatgac
     1081 ttcctgggga agcgccgaca gattgagcca caatccaggt atttttggcg gctattacgg
     1141 cccgcctaat cctcgttttg tgatcagaaa taccgacctg atggaacggc tgcaagcaga
     1201 tgaagacctt gatatcttca gccaattcga cctgatgaat aagcagcagt tgaatggcga
     1261 atacattatg gaatcgtcat caacgtcaac tcagcaattt gccgaaggag atgtgttcgc
     1321 cttctcgctg ggcggcggtg gcggctatgg cgacgttctt gagcgagaac cggaatccgt
     1381 tttggaagat attcagacga atgttctgac gaaagaagtt ggagaaacgg tttatggcgt
     1441 cgtgttcaat tcggaaactg gcgacgtcga tgtgaaaaag accgataaaa agcgtgcttc
     1501 aatgaaaaaa aatcgtttga aacaaggaaa accttttaac gaattcgtaa ccggctggct
     1561 gaagaaaagg ccaaatgagg agatcatcca gaactatggc aattatccgg aaccccgggt
     1621 cgaaaattat gacaagccat tttggggaat gtacgaataa tggagaagtc gcttgatcaa
     1681 tttattggtg aacatgatcg cggactttat ctcccaattc tattcagctt atcgatgcgc
     1741 ctggaacaca tggtgtggca ggaaatcgaa agtgatgccg cgcttgtcgc cttcgctctt
     1801 cgtaatggaa ttacggcatt taatacgaat ggagtgataa attggttcga cacgtggatg
     1861 gaagccgaag cactgggact taacctgtcg cgcgataaaa acggacaggt gctgtcggtt
     1921 aatggccaga ttaacagaga cgttgatccg gaacagtttg tcaagaatgg gcaggtgtcc
     1981 atcgctgtcg atgttgccaa gcgccttagt agtgaattgg cagagcgctc agtggtcttc
     2041 ggatacctaa cgggcgggtc aacaatggcc gagaaatgtt tcccgcaaga ccttaagcag
     2101 aaattgtttg ccgaagacca gccacaagat atttctgatg atgataaagg cctcatagat
     2161 ttggtggccc gttgcagtct gcagatggcg agagaatatt gtgaatcagg agcgacggca
     2221 ttgttgcttg tagaggagat tgagccttca aaggtaatcc tggacgcgta cgagccgctt
     2281 tttaatctgg ctaactatta ctcaatacca gtgctttccc tgcaccgtga accgccatca
     2341 aaaagtacgg ctgccgtgct tgaaaagttt ggctgctttg ccatgttgaa tgaaaaaaat
     2401 gatgcagaag agggtaatgt ggttctctca gaatctatct ttctgagtgc tgatggcagt
     2461 gatgcggaac ttaacaatat tgtcagtaat cagaatcggt tgatcacaac ttattgggac
     2521 ctgcccttca attcgaaatt agaacgagtg gccgaaatcg gccgcaccat gacaaattag
     2581 aacaggaaaa atggcacggt agattatgta tacgattgat atagacgttg ggggcacctt
     2641 tacggatggc tactttacca atggcaagga aatcaaaact gctaaggttc tcaccactcc
     2701 ccatgacata tctgaatgca tcggcaactg tgtggtcttc ggcgcagaag cctttggcca
     2761 gccactgaag gaatttctcc gcaaaaatga cgtggcgcgt gtatcaacaa cagttggtac
     2821 caatttaatt atccaagctg ccggaccaaa aatcggtctc ttggtgacaa aaggatcaga
     2881 gcaaaccctg tacggcgata gctcagaggg tttgattggt tcttatgttg cggaagatat
     2941 gattatcggc gttgaagaag aagttgacaa agacggctcc ctcaaaatca agctcgatcg
     3001 tgaggaagtc ctagccgcca tacgccaatt gctcgatcaa ggtgccagaa tgatcgtcgt
     3061 tagtttccga aacgcttgg
//
LOCUS       DASCNL010000908         1793 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001859988, whole genome shotgun sequence.
ACCESSION   DASCNL010000908 DASCNL010000000
VERSION     DASCNL010000908.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001859988"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="QF359_11945"
     CDS             <1..327
                     /locus_tag="QF359_11945"
                     /inference="COORDINATES: protein motif:HMM:NF019349.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HJO87666.1"
                     /translation="DAETVIDSPAEFTEAGQRFHLAVVEASGNRALIAQFRALRYVVW
                     PQNAQRAKREIAENAQKIHHQLYNLIKAQNGNAARKLMIDHLFSIRAVSFSGTAEDAA
                     NGMICC"
     gene            390..1397
                     /locus_tag="QF359_11950"
     CDS             390..1397
                     /locus_tag="QF359_11950"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87667.1"
                     /translation="MIIDCHAHVSAPVELWAYKASILSHRGSHGRGKVNVTDEQIRHA
                     VEEHKEAFPHPHLHYIDKVGTKMQLISPRPFQLMHSEEAKLVQWFQEEVNNIIYRETQ
                     LYPDRFIGIAGIPTAAGEPLDMAIKELERCVNELGFKGTLLNPDPYENTGTHPPALGD
                     QYWYQLYEKLCELDIPAHIHGTGSRSPREPYSLRFINEETTAVFGLINSNVLKDFPDL
                     KIVVSHGGGAMPYQLGRFQAGSMRREEGDRFIDGMHKLYFDTVLYTKDAIELLLKVVG
                     PERALFGAECPGVGSKIDPATGREMDDIAPYFHEIDFLTDADREMIFSGNAKRVFKLD
                     V"
     gene            1415..>1793
                     /locus_tag="QF359_11955"
     CDS             1415..>1793
                     /locus_tag="QF359_11955"
                     /inference="COORDINATES: protein motif:HMM:NF015682.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HJO87668.1"
                     /translation="MSDLAVERLRKIDSCAVSDALDALQLKGTVMGLSSISVLRRIAG
                     RVQTVKLGKASPDIPKKHLCSSAVDAARPGDVIVVENHATDFAAGWGGILSTAAAAKG
                     LSGSIVDGPAREADESRDVDYPVF"
BASE COUNT          451 a          412 c          477 g          453 t
ORIGIN      
        1 gatgcagaaa ctgtaattga tagcccggcc gaatttaccg aggcgggcca gcggttccac
       61 ttggcggtag ttgaagcctc tggcaaccgg gctttaattg cccagttcag agccttgcga
      121 tatgttgtat ggccgcaaaa tgcgcaacgg gcaaaacggg aaattgctga aaacgcccaa
      181 aaaatacatc accaattata taacttaata aaagcgcaga acggtaatgc agcacggaaa
      241 ttaatgatag accatctttt cagtatccgc gcagtatcgt tttcgggaac tgctgaagat
      301 gctgcgaatg gaatgatttg ttgttaaatt gatattcgca tgctgaaagc aatgcgattg
      361 ttactataat atatcaggga gtgaataaaa tgattattga ttgccatgcc catgtcagtg
      421 cccccgttga attgtgggcg tacaaagcat ctatcttatc gcatcgtggc tcgcacggcc
      481 gcggtaaagt aaatgttacc gacgagcaaa ttcgtcacgc ggtcgaagag cataaggaag
      541 ccttcccgca tccacatctg cattatattg ataaggtcgg caccaagatg cagttgatct
      601 cgccgcgccc gttccaattg atgcacagcg aagaagccaa actggtgcag tggtttcagg
      661 aagaagtcaa taacatcatc tatcgggaaa ctcagcttta tccggaccgc tttatcggca
      721 tcgctgggat tccaacagcg gccggtgagc cgcttgatat ggcgattaag gagctagagc
      781 gatgcgtcaa cgagcttggc tttaaaggca cattactcaa tccagatcct tatgaaaata
      841 ccggcaccca cccaccggca ttaggtgatc aatactggta tcagctctat gaaaaacttt
      901 gtgagctgga tatcccggcc catattcacg gcaccggttc aagatcacca cgtgagcctt
      961 attcgctgcg ctttatcaat gaagaaacga cggcggtctt tggcctgatc aattcgaatg
     1021 tgctcaaaga cttcccggat cttaagatcg ttgtctccca tggtggcggc gccatgccgt
     1081 atcagcttgg ccgctttcag gcgggctcga tgcgccgtga agagggcgat cgctttatcg
     1141 acggcatgca caagctttat tttgataccg tgctttatac caaagatgca attgagttgc
     1201 tgcttaaggt ggtggggccg gaaagggctt tgtttggtgc cgaatgcccg ggcgttggtt
     1261 cgaaaattga tccggcgacc ggccgcgaaa tggatgatat tgcgccctat ttccatgaga
     1321 tcgatttctt gaccgatgct gatcgcgaaa tgatattctc tggcaatgct aaacgagtct
     1381 ttaaactcga cgtttaaaga agagggttcc aacaatgagt gacttagctg tcgaaagact
     1441 gcgtaagatc gatagctgtg ccgtatcaga cgccttggat gcgctgcagc taaaaggtac
     1501 tgttatggga ttgagttcga tctcggtttt acgccgcatc gccgggcgtg tgcagaccgt
     1561 caaactcggt aaagccagtc ccgatattcc gaaaaagcat ttgtgctctt cggcggttga
     1621 tgcggctcgg ccgggtgatg tgattgtggt tgaaaatcac gctaccgatt ttgctgcagg
     1681 ttggggtggc atattatcga cggcagccgc agctaaagga ttatccggct ctattgtcga
     1741 tggcccggcg cgggaggctg atgaaagccg ggatgttgat tatcctgtct tcg
//
LOCUS       DASCNL010000909         2181 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001860042, whole genome shotgun sequence.
ACCESSION   DASCNL010000909 DASCNL010000000
VERSION     DASCNL010000909.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001860042"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..940)
                     /gene="hrcA"
                     /locus_tag="QF359_11960"
     CDS             complement(<1..940)
                     /gene="hrcA"
                     /locus_tag="QF359_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HJO87669.1"
                     /translation="MNTKRPVISALNNRSREIFMKIVESFVETGEPIGSRSLSQQLST
                     SLSPATIRNVMADLEDFGLLFAPHTSAGRMPTDTGLRMFVDGLLEIGNLTSDELDDLE
                     SRLAGTGKSVEGVLEEAGTTLSGLSNCAGMVLAPNTDSALKHIEFVNLRPGRALVVMV
                     TAEGVVENRIIEVPRDIPTSAFTEATNYLNARLIGHTINETRLAINTEIEQSKNQLNM
                     LSAKVVEVGLATWAGDADAGNVPGTLIVRGQANLLEDVNAIDDLERIRALFLALETDE
                     TMLKILELADTAEGVQIFIGADNELFNLSGCSFIVAP"
     gene            1102..1818
                     /gene="rph"
                     /locus_tag="QF359_11965"
     CDS             1102..1818
                     /gene="rph"
                     /locus_tag="QF359_11965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HJO87670.1"
                     /translation="MRPSGRAPNQMRDVTIELNFNKHAEGSCLIKFGDTHVICTATVE
                     DRVPPWLRDAGHGWVTAEYGMLPRSTNSRINREATRGGQGGRTHEIQRLIGRSLRAIT
                     DLKALGEKQVRIDCDVIQADGGTRTASITGGYVALYLASQNLAELGVIKEIPLLGQLA
                     AVSCGICEDTAVLDLDYPEDSNAEADANFILTGTAEIVEIQGTAEDQPFSEAHLLEML
                     ALAKKGVGELIDIQKSVLGL"
     gene            1893..2181
                     /locus_tag="QF359_11970"
                     /pseudo
     CDS             1893..2181
                     /locus_tag="QF359_11970"
                     /inference="COORDINATES: protein motif:HMM:NF013854.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009143 - nucleoside triphosphate catabolic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
BASE COUNT          543 a          547 c          569 g          522 t
ORIGIN      
        1 acggcgcgac aataaacgaa caacccgaca aattaaacaa ctcattatca gcgccgataa
       61 atatttgtac gccttccgct gtgtcggcga gttcgagtat tttcagcatg gtttcatcgg
      121 tttccaaagc caaaaacaag gcacggatgc gttccagatc atcaatcgca ttaacatctt
      181 caagcaggtt tgcttgacct cgaacaatca gcgttccagg aacattgccc gcatccgcat
      241 cgcccgccca ggtcgctaat ccaacttcga caactttggc cgagagcatg ttgagctgat
      301 ttttactttg ctcgatctca gtattgatcg ccaggcgcgt ttcattgatg gtgtggccga
      361 tcaaacgagc gttcagataa ttggttgcct cggtaaaggc tgaggtggga atatctctgg
      421 gcacttcaat aatgcgattt tcaacaacgc cctccgctgt caccatgacc accaaagcgc
      481 ggcccggcct gagattaacg aactcaatat gcttgagcgc agaatctgtg ttcggtgcca
      541 agaccatacc ggcacagttt gaaagaccgg acagcgtcgt gccagcttct tccaaaacac
      601 cttcgacgct ttttcctgtg ccggccaagc ggctttcgag atcgtccagc tcatctgacg
      661 tcaaattgcc aatttcaagc aaaccgtcaa cgaacatgcg caaacctgta tccgtcggca
      721 tgcggccggc cgaggtgtgg ggtgcaaaca ataggccgaa atcctccaga tccgccatca
      781 cattgcggat agtagccggt gacaggctgg tcgagagttg ctgggatagg gagcgcgagc
      841 cgatcggctc cccagtctcg acaaaagatt cgacgatttt cataaatatt tcccgtgagc
      901 ggttattgag cgcggagatg actgggcgtt tggtgttcat atctattttc ttaaacatta
      961 aaagctgggc ggaatgtagt tttgcagttg gcctacgtca acggctacga aatttaatcc
     1021 tattttttat ccgctagacc ttggcaccaa gcttcgttag tttgccggaa ccaatttcat
     1081 gtcgttgagg aaggaatatc tatgcgtcca tccggccgcg cgcccaatca aatgcgagac
     1141 gtcacaatcg agcttaattt taacaaacat gccgagggct cgtgcctgat taagtttggc
     1201 gacactcatg ttatctgtac ggcaaccgtt gaagaccgcg tgccaccctg gcttcgggat
     1261 gccggtcacg gttgggtgac ggcggaatac ggcatgctgc cccgctcgac caattcgcgc
     1321 atcaaccggg aggcaacacg gggcggccaa ggcggcagaa cccatgaaat tcagcgccta
     1381 attggccgct cgttgcgggc gattaccgat ctgaaggcgc tcggtgaaaa gcaggtacgg
     1441 attgattgtg atgtcattca agcagatggc ggcactcgca cggcttcgat taccggcggc
     1501 tatgtggcat tgtatctagc cagtcagaat ttggccgaac ttggcgtcat taaagaaatc
     1561 ccgctgctcg gacaactcgc tgcggtttcc tgcggtattt gtgaagacac agcggtgctt
     1621 gatctcgatt atccggaaga cagtaatgcc gaggcagatg ccaattttat tctcaccggc
     1681 acagccgaaa ttgttgaaat tcaaggcacg gcggaggatc agccgttttc cgaggcgcat
     1741 ttgctggaaa tgctggcgtt ggctaaaaaa ggcgttggcg aactgattga tattcaaaaa
     1801 tcggtcctcg gcctctaatg gcgcggaaat ttaccgaaaa aaagctggtt attgccagtc
     1861 ataatcctgg aaaagtttat gaaatcaata atttattgag cccatttggc gttgaggtgg
     1921 tttcagccgg agagctcgga ctgccagaac cggttgaaga cggcgacact ttcagcgtca
     1981 atgcggaatt gaaggcccgg gcagcggcaa aaggtgcaga tttgccggct ttagccgatg
     2041 actccgggct tgtcgtcccg gtattggacg gtgatcccgg catttattct gccagatggg
     2101 ctgaaaatcc aaccggttcc aataaagatt tcgattacgc aatgaataaa gtccgccaag
     2161 ccattaaaac gaagggtata a
//
LOCUS       DASCNL010000910         1094 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001860126, whole genome shotgun sequence.
ACCESSION   DASCNL010000910 DASCNL010000000
VERSION     DASCNL010000910.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1094)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1094)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001860126"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..516)
                     /locus_tag="QF359_11975"
     CDS             complement(<1..516)
                     /locus_tag="QF359_11975"
                     /inference="COORDINATES: protein motif:HMM:NF015366.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HJO87671.1"
                     /translation="MIGTKLTLTGIALGAAALAFQPTAAQAEWPERPITVVVMYGAGG
                     GTDTVIRTLVGEMAKSTGWKINVINKPGAVGGIATKYVAGKKADGYTLLGAANYNKYA
                     SVMGHTKTRAWKDWQYMQAANSRGSWSVRPDSKFKTFADIIAAAKANPGKVTISTSGT
                     GGLWHELAAVVA"
     gene            829..>1094
                     /locus_tag="QF359_11980"
     CDS             829..>1094
                     /locus_tag="QF359_11980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87672.1"
                     /translation="MPVDALVPDNAIPNLSPINFGLEDGVEWKNEYSVGVPKFDVDYM
                     IILDLINTHLSTEINLDTVQFLLDQLNEYTTGHYILEEEHMDRIG"
BASE COUNT          316 a          239 c          240 g          299 t
ORIGIN      
        1 ggccacgacg gcagccaatt catgccaaag accaccagta cccgaagttg aaatggtaac
       61 tttgcccgga ttggcttttg ccgcggcaat aatgtcagca aaagttttaa attttgaatc
      121 cggacggaca gaccagctac cgcgtgaatt ggcagcctgc atatattgcc aatctttcca
      181 agctcttgtt tttgtgtgcc ccatgacgct ggcatatttg ttgtaattgg cggcacccaa
      241 aagcgtgtaa ccatcagctt ttttaccggc tacatattta gtggcaatac caccaacagc
      301 gcccggcttg ttaatcacgt tgattttcca gccggtagat ttggccattt caccaacgag
      361 tgtacggata acggtatccg tgccaccacc ggcgccatac ataacgacga cggtaattgg
      421 acgttccggc cattcggcct gagcggcggt gggttgaaat gccaaagcgg cagcacccaa
      481 ggctatgcct gttagggtta atttagtccc tatcatatga atatctccct agttcatagt
      541 gttaaataat aaaattatat tgcgagtgat tgtagtttaa acggtcttat ataagactgt
      601 ccaccttatg cttcacaaac acgtgaagtc aagacgtcta aaaagtacta ttggtgagta
      661 tcgaaagaat attaattact atctgctaag ttggcatgaa aactcgtagc ttacttttcc
      721 agcacactga ctaaatttag tgataattat tcaaagcgaa cctcgctgaa tatagactta
      781 gtaccgtagt atcatctaga atagctagat tacgtggcgc acattaaaat gccggtcgat
      841 gcattagtgc ccgataatgc aataccgaat ttgagcccga taaattttgg actggaggat
      901 ggtgtggaat ggaaaaatga gtacagcgtc ggagtgccta aattcgacgt cgattacatg
      961 atcattctcg atttgataaa tacccactta tcaactgaga taaatctaga cacggttcag
     1021 ttcttattgg accagctaaa tgaatacacc accgggcatt atattctgga agaagagcat
     1081 atggatcgca tcgg
//
LOCUS       DASCNL010000911         1089 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001860386, whole genome shotgun sequence.
ACCESSION   DASCNL010000911 DASCNL010000000
VERSION     DASCNL010000911.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001860386"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1089
                     /locus_tag="QF359_11985"
     CDS             <1..>1089
                     /locus_tag="QF359_11985"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HJO87673.1"
                     /translation="ALPIIIVLFVVLTIFQKFLPGLLYGRGYPLDRLLYSTYVGNAGI
                     FGLPLGIAANIVIVYLIFGALMDRAGASRWFMDMALALTGWSRGGPAKAAVVASAMFG
                     SISGSPSGNSATTGVFTIPMMKKIGYTPAFAGAVEAVASTGGMILPPVMGAIAFIMAE
                     WIEVSYATIVIAAAAPAALYFLIVFVSVHLQARRDGIEALPREELPKFWPVFVSGWFY
                     LIPMAALVYFLLVKSFPPGMSGIFTCGVVFIVSFFSKNRDHWLTPLNIMRAFDEGTRR
                     WITVASITAAVGIMIGALELSGVGIKVSRFIVDLAGGDLTLTLLFVGIVSLIVGMGLD
                     ATPAYVTLATLMAPALVRLGVPDIAAHL"
BASE COUNT          183 a          272 c          319 g          315 t
ORIGIN      
        1 ggcattgccg atcatcattg ttttgtttgt tgtgctgaca atttttcaaa agtttcttcc
       61 gggcctgctc tatggtcgtg gttacccgct cgaccggttg ctctacagca cctatgtcgg
      121 caatgcgggg atttttggac tgcccttagg catcgccgcc aacatcgtta tcgtctatct
      181 gatttttggc gcgctgatgg accgcgccgg ggcgagccgc tggttcatgg atatggcctt
      241 ggcgcttacg ggttggtcca gaggtggacc ggccaaggcc gcggtggtag cgagcgcgat
      301 gtttggctcg atctcaggtt caccatccgg caattcggcg acaacgggcg tgtttaccat
      361 tccgatgatg aaaaagattg gctacacacc agctttcgct ggtgcggttg aggcggttgc
      421 gtcaaccggc gggatgatat tgccgccggt gatgggtgcg attgccttta tcatggcgga
      481 atggattgaa gtctcttacg ctaccatcgt catcgccgcc gccgcaccgg cagcgcttta
      541 ttttctaatc gtctttgtct cagttcatct gcaggcacgt cgcgacggca ttgaagcgtt
      601 gccgcgagaa gagttaccta aattctggcc ggtgttcgtc agtggttggt tctatctgat
      661 cccgatggct gccttggttt attttttgct ggtcaaatct ttcccgccgg gcatgtcggg
      721 catctttacc tgtggtgtcg tttttattgt cagttttttc tccaagaatc gtgaccattg
      781 gctgacaccc ctgaatatca tgagggcatt tgatgaaggg acccgccgct ggattacggt
      841 tgcttctatc acggcggcgg ttgggatcat gatcggtgcg ttggaactct ccggcgtagg
      901 tatcaaagta tcccgattca ttgtcgattt ggcaggaggg gatttaactt taaccctgct
      961 gtttgtcggc attgtcagcc tgatagttgg catgggactg gatgcaacac cggcttatgt
     1021 cacccttgcg acgctgatgg cgccggcgct ggtgcgcctg ggcgtgccgg atattgcagc
     1081 ccatctatt
//
LOCUS       DASCNL010000912         2723 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001861031, whole genome shotgun sequence.
ACCESSION   DASCNL010000912 DASCNL010000000
VERSION     DASCNL010000912.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001861031"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="QF359_11990"
     CDS             complement(<1..723)
                     /locus_tag="QF359_11990"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF013007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HJO87674.1"
                     /translation="MAIPELSIIGERINPGFRSTKAMFDNSDIAAIQELAIKQADAGA
                     VYLNINIGTRALDDPEFMNEVINGIQAVVDIPLSFDFPNVAVQEICLNKYDPAKANGQ
                     PPIVNSICETRWDMLDLLKIQPFKIILMSSERVEDGVGMQNKTAPEMWKTTRRIAKAI
                     LSAGYDITLDDLIVDTAIGTLSSDTEGLTRASLETVNLINQDPDLKGIHMSGGLSNLS
                     VQLPSKEIDGAPMKLQLENAYLT"
     gene            complement(742..2586)
                     /locus_tag="QF359_11995"
     CDS             complement(742..2586)
                     /locus_tag="QF359_11995"
                     /inference="COORDINATES: protein motif:HMM:NF025925.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASKHA domain-containing protein"
                     /protein_id="HJO87675.1"
                     /translation="MTAFKISFEPMQEVIECTAGETILEAARRERVRISSSCGGHGTC
                     MSCAVQVTEGALPSAHEADAQVFSDRRLGEGWRRACITEPIGDCTISVPARSTAAPVR
                     TQVDGLSNDMAKWVDFEPVVKVIQFELDEPTLEDGRSDEMRLRDALTADHPGACVTFD
                     AALLRNFASDVRKWGWAGWLATTKGEVIAAGSREARVFAMAVDLGTTNMSGFLVDMIT
                     GETLAAEGIENPQTSYGADLITYASHIRRNPETAIILQELAVEAINQLATDMCEAVGV
                     QASDIVEVTIAGNTMMHHLLLGLPVTQLAMSPFISAYSDALDLKARDLEIKVAPGGYI
                     HLLPNIAGFVGGDHVASLLASKFIEGKPVIIMDIGTNTELSLVEGDNITSVSCPSGPA
                     FEGGNISFGMRAAAGAIESVRLKNNKVQLQTIGDEAPVGICGSGVMDIAAQLYLGGVC
                     NERGRLQKDHPRVKEIGKNLVFVLADEEATGGQEITFSQDDLRAVQLAKAAIRSATDL
                     LLKHTGYTERELGQIIIAGAFGSYIDVDSALAIGLLPNLPYNRFAQVGNAAGDGARFA
                     LLSEKQREVAKDIARRSNYIELANDKGFMKVFGSRINFEKQRAIKSVA"
BASE COUNT          691 a          722 c          641 g          669 t
ORIGIN      
        1 tgtgagataa gcgttttcca gttgcagctt cattggtgcg ccatcaattt ccttggacgg
       61 cagttgaact gatagattag aaagcccgcc ggacatatga atgcctttta aatcgggatc
      121 ttggttaatt agatttacag tttccagtga agcccgggtc agcccttcgg tatcggagga
      181 aagtgtgcca attgccgtat caacgatcaa atcatcaagc gtaatatcat agcccgctga
      241 caaaattgcc ttcgctatgc gccgggtcgt tttccacatt tcaggtgccg ttttattctg
      301 catgccgaca ccatcttcga cgcgttccga agacatcaaa attattttaa atggttggat
      361 tttcagcaaa tcaagcatgt cccaacgggt ttcgcaaatc gaattaacaa tcggtggttg
      421 gccatttgct ttcgctggat cgtatttatt aaggcaaatt tcctgcactg cgacattagg
      481 aaaatcgaac gagagcggga tatcaacgac cgcctgaatg ccgttgatga cttcgttcat
      541 aaactcggga tcatctagcg ctcgcgttcc gatattgatg tttagatata ctgcgccagc
      601 gtcggcttgt ttgatggcta gctcctgaat ggcggcgata tctgaattat cgaacattgc
      661 cttggtactt cggaagccgg ggttaatccg ctcgccgatg attgatagtt caggtatggc
      721 cattaatggg gtcctcaaat tctaggcaac tgatttaatt gcccgttgtt tttcaaaatt
      781 aatccggctg ccaaagactt tcataaagcc tttgtcgttg gcgagttcga tatagtttga
      841 gcgtcgcgcg atatccttag caacttcacg ctgtttttcg gagagcaagg caaaacgcgc
      901 tccatcgccg gcggcattgc ctacctgggc gaaacggtta tacggcagat tgggcagcaa
      961 tccgatggcc aatgcactat cgacatcgat atagctgccg aaagcgccgg caataatgat
     1021 ttgcccgagc tctcgctccg tatagcccgt gtgtttgagc agcaaatccg tcgccgaccg
     1081 gatggcagct ttggcgagtt gaaccgcccg aagatcatct tgagaaaacg ttatttcctg
     1141 ccctccggtg gcttcctcat cggccaagac aaacaccaaa ttcttgccaa tttccttgac
     1201 ccgcggatga tctttttgca aacggccacg ctcattgcag actccgccta aatataattg
     1261 ggccgcgata tccatcacgc ccgagccaca aattccgacc ggcgcctcgt caccgatggt
     1321 ttgaagctga actttgttgt ttttaagccg aacggactca atcgcaccgg cggccgctcg
     1381 cataccgaaa ctaatattgc cgccttcaaa agccgggccc gaggggcagg aaacactggt
     1441 aatattgtca ccttcgacca atgaaagctc ggtatttgtg ccgatatcca taatgataac
     1501 cggcttgcct tcaataaatt tggatgccag taaagacgca acatgatcgc cgccaacaaa
     1561 gccggcaata ttcggcaaca aatgaatata tccaccaggt gccactttaa tttcgagatc
     1621 gcgggctttg aggtctaacg cgtcgctata agccgagata aagggcgaca tagccaattg
     1681 tgttaccggt agtccgagca acaaatgatg catcatcgta ttaccggcaa tcgtcacttc
     1741 aacaatatcg cttgcttgga cgccgaccgc ttcgcacata tcggtggcca attgattgat
     1801 cgcctcaacg gctagttcct gtaaaattat tgccgtttca ggattgcggc gaatgtggga
     1861 ggcataggta atcaaatctg cgccatagct ggtttgtgga ttttctatgc cctcggcagc
     1921 caaggtctcg ccagttatca tatcaaccaa aaatcccgac atattagttg tgccaagatc
     1981 aacagccata gcgaaaactc gagcttcgcg cgagccggca gcaatcactt cgcccttcgt
     2041 ggttgcgagc cagccagccc agccccactt tcttacatcc gaagcaaagt tacggagcaa
     2101 cgccgcatca aaggtcacac aagcgccagg atgatctgcc gtcaaagcat cacgcagacg
     2161 catttcatct gaacggccat cttccaaggt gggttcatca agctcaaact gaataacttt
     2221 aacgaccggt tcaaaatcga cccatttcgc catatcattg ctcaggccat cgacttgagt
     2281 cctgacggga gcggcagtag aacgcgccgg tacgctaatg gtgcaatcgc cgatgggttc
     2341 agtgatgcag gcccgccgcc agccttcgcc caaccggcga tcagaaaata cttgcgcatc
     2401 tgcctcatga gctgatggca aagcaccttc cgtaacctga actgcacaag acatacaggt
     2461 accatgaccg ccgcaggaac ttgatattcg aacgcgttcc cgccgcgccg cttcaaggat
     2521 cgtctcacca gctgtacact cgataacttc ctgcatcggc tcaaaggaaa ttttgaacgc
     2581 ggtcatgcgg cgagactttc aggagtgcga aaacggcaac gctcccgtgc tttacaggtc
     2641 tcgcaatctt tcttgcgatt ccagcgcggt aaattctgac caagaccaaa taccagagaa
     2701 atagatttcg ccggaaacag cat
//
LOCUS       DASCNL010000913         3190 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001862728, whole genome shotgun sequence.
ACCESSION   DASCNL010000913 DASCNL010000000
VERSION     DASCNL010000913.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3190)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3190)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3190
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001862728"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            270..1127
                     /locus_tag="QF359_12000"
     CDS             270..1127
                     /locus_tag="QF359_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HJO87676.1"
                     /translation="MKPSAFNYAKPSSVDEVLGLLSEYGDEATILAGGQSLVPTMNMR
                     LSAPSLVIDINGLAELSGISSNGESLRIGALTRHVEIENSSEIAEHAPLITMAMPSIA
                     HPAIRNRGTMGGSIAMADPAAEMPACLCALGAEIEITGGSGARKVAATDFFKGLYDTD
                     LGGDEIITAIEIPKISAGYRSAFDELARRHGDYAMCGAAAHAKVDGLVISDLRLVFFA
                     VGGTPVVAAAVGSAMADQTVDAISIVAAQHAVEDDLSPFDDLQCSATLRMHYAKELTK
                     RILNTLAAG"
     gene            1143..1631
                     /locus_tag="QF359_12005"
     CDS             1143..1631
                     /locus_tag="QF359_12005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO87677.1"
                     /translation="MTTVIEQIQISATVNGEKVTRLIEPRLSLVDFLRNELELTGTHV
                     GCEHGVCGACTVRVNGEIVRGCLMLAVQAGGTEIMTIEGESDGGEIADLQKAFHERNA
                     AQCGFCTPGLIMTTTELLKTNPDPNRAEIREYLSGNYCRCTGYEAIVDAIETVATERK
                     GG"
     gene            1635..>3190
                     /locus_tag="QF359_12010"
     CDS             1635..>3190
                     /locus_tag="QF359_12010"
                     /inference="COORDINATES: protein motif:HMM:NF014758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein"
                     /protein_id="HJO87678.1"
                     /translation="MADMIKDHILDRPNSYIGKTIPRPNAKRLLSGRGTFTDDVKLLR
                     MTHVAFLRSTYAHAEIVSIDASAAKESNGVVAVVTGAEMAEVCSPWVGVLSHLEGLKS
                     APQHALAVKKASWQGEPVVAVVANTRAQAEDAIELVEIEWKELPVVTDMETALDADTP
                     LIHPELGDNLAWRRELDVGDVDGAYANADHVIEETYISNRHTGVCLETRGILADYNPG
                     EDQLTIYHSTQAPHMMQSLFAKHLDIEEHKIRVICKDVGGSYGIKVHSYPDEYATVAL
                     AYMLKRPVKFTADRLESFTSDIHARDHRIKTKIAVSNEGEIQAFEIDDLTGIGPYSVY
                     PRTSGIEANQVVNLTGGQYLNPNYRAMATVVLQNKSPMCQYRAVGHPILTMITEGMVD
                     DAARKIGMDPLEIRRKNLVPDDAYPYTAPSGLPFENLSHQASLEKLVKMMDYDGLRKD
                     QAEAREQGIYRGIGLATFIEVTNPGPAFYGVGGAPISAQDGATMRLDAKGNVIVEIGV
                     TEQGQGAEAVV"
BASE COUNT          789 a          752 c          861 g          788 t
ORIGIN      
        1 tcaaaaccaa cttcggcgaa atagcgcact gcttcatcaa taatttgctg ctcgcgttca
       61 tcacggctta aacgtttgcg ttttttggtt ttggtttggg gcacgcttta gatctctttc
      121 caaattgcta ttggcgatga gttttaggcc attggcacca ttgacagaaa ttgaatgcgg
      181 cgtaatatca ttccttattg atcatttgat cactttaata acaataataa tatttgccca
      241 gtattaaaaa ataaaattgg gaggctcaat tgaaaccgtc agcatttaat tatgctaagc
      301 cttcatcagt ggatgaagtc cttggcctgc ttagtgaata tggcgatgag gcaacaattt
      361 tagccggtgg tcaaagttta gtgccgacca tgaatatgcg tttatcggct ccatctttgg
      421 ttatcgatat taatggccta gcggaattaa gcggtatctc gagcaatggg gaaagccttc
      481 gcattggcgc gttgacccgc cacgttgaaa ttgagaactc gtcggaaatt gctgaacatg
      541 cgcctctcat caccatggca atgccgtcaa ttgctcaccc cgccattcgt aatcgcggta
      601 ccatgggcgg cagtatcgcg atggcggacc cggcagcgga aatgcccgcc tgtctttgtg
      661 ctcttggcgc tgaaattgag attaccggag gcagcggagc ccgcaaagtc gcggcgacag
      721 attttttcaa aggtctctac gatactgatc taggtggtga tgagataata acagccattg
      781 aaattcccaa aattagtgcc ggatatcgct cggcttttga tgaactggcg cggcgacacg
      841 gcgattatgc gatgtgtgga gcagccgcac atgccaaagt tgatggctta gtgatttcag
      901 atttacggct ggtgttcttc gctgtcggcg gcacacctgt cgttgctgct gcagtaggtt
      961 ctgccatggc agaccagacg gtcgatgcga tcagtatcgt tgcagcgcaa catgcagttg
     1021 aggatgatct ctcgcctttt gatgatctgc aatgctcggc gacgctcagg atgcattacg
     1081 ccaaagaatt gaccaaacgc attcttaaca cgctggctgc cgggtagggg ggagagataa
     1141 aaatgacaac agtaattgaa caaattcaaa tttcagccac cgtaaatggt gaaaaagtta
     1201 cgcggctgat tgagccccgc ctctcattgg ttgattttct ccgcaatgag ttggagctaa
     1261 ccggtaccca tgttggctgt gagcacggtg tttgcggcgc ctgtacggtc cgtgttaatg
     1321 gagagatcgt ccgcggctgc ctaatgctgg cggttcaggc tggcggcact gagattatga
     1381 ccattgaagg cgagtctgat ggcggcgaaa tagctgatct gcaaaaagcc tttcatgaac
     1441 gcaatgcagc gcaatgcgga ttttgtacgc cgggcttgat tatgacgacg acggaattgc
     1501 ttaaaaccaa tcctgatccc aaccgcgccg aaatccgaga gtatttgtcc ggaaactatt
     1561 gccgctgtac aggctatgaa gcaattgtcg atgcgattga aacggtcgca actgaaagaa
     1621 agggagggta ggtcatggct gatatgatta aagaccacat cctcgaccgt cccaacagct
     1681 atattggaaa aacgattccg cgaccgaatg ccaaacgtct cttgagtggc cgtggcacct
     1741 ttaccgatga cgtaaaatta ctgcgcatga cccatgttgc ttttttgcgc tcaacctatg
     1801 cccatgccga gattgttagc attgatgcca gtgctgccaa agaaagcaat ggtgtggttg
     1861 ccgttgtcac tggtgcggaa atggcggaag tgtgttcacc ttgggtgggc gtgttgagcc
     1921 atctcgaagg cctgaaatcg gcgccgcagc atgcattggc tgtaaaaaaa gcgtcctggc
     1981 agggtgagcc ggttgtcgcc gtggtcgcca atacccgcgc ccaagcggaa gatgccattg
     2041 aacttgtcga aatcgagtgg aaagagctgc cggtggtgac tgatatggaa acagcacttg
     2101 atgcagacac accgctgatc catccggaac ttggtgataa tctggcctgg cggcgagaat
     2161 tggatgtcgg tgatgtcgat ggcgcctatg ccaatgctga tcatgttatc gaagaaacct
     2221 atatttctaa tcgccacacc ggtgtatgct tagagacgcg tggtattctc gccgattata
     2281 atcccggcga agaccagttg acgatttatc attcaaccca ggcgccgcac atgatgcaaa
     2341 gcctgttcgc caaacatctc gatattgagg agcataaaat ccgggtgatt tgcaaggatg
     2401 ttggtggctc ttacggtatc aaagtgcact cctatccgga tgaatacgcg acggtggctt
     2461 tggcttacat gttgaaacgc ccggtaaaat ttacggctga tcggctcgag tctttcacca
     2521 gcgatattca cgcccgggat caccggatta aaaccaaaat tgcggtttca aatgagggtg
     2581 aaattcaagc cttcgaaatc gatgatctca ccggcatcgg gccctattca gtttatccgc
     2641 ggaccagcgg catcgaggcc aatcaggtgg ttaatctgac gggcggccaa tatctcaatc
     2701 ccaactaccg ggcgatggca acggtggtgc tgcaaaataa atcaccgatg tgccaatacc
     2761 gggcggtcgg tcacccaatc ttgacgatga tcaccgaagg tatggtcgat gatgcggcgc
     2821 gtaaaatcgg catggacccg cttgaaatcc gccgcaaaaa cctagtgccg gatgatgcct
     2881 atccttatac cgcgccatcg ggattgccgt ttgaaaacct ctctcatcag gcgagcttgg
     2941 aaaaacttgt caagatgatg gattacgatg ggctccgcaa agatcaagcc gaagcgcgcg
     3001 agcaaggcat ttaccgaggc atcggtctcg cgacctttat tgaagtgacc aatcccggac
     3061 cagccttcta tggtgtcggt ggggcgccga tctcggctca ggatggtgcg acgatgcggc
     3121 ttgatgccaa aggcaatgtt attgttgaaa ttggcgttac cgagcaaggc caaggtgctg
     3181 aggcggttgt
//
LOCUS       DASCNL010000914         2576 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001862988, whole genome shotgun sequence.
ACCESSION   DASCNL010000914 DASCNL010000000
VERSION     DASCNL010000914.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001862988"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1704)
                     /locus_tag="QF359_12015"
     CDS             complement(<1..1704)
                     /locus_tag="QF359_12015"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HJO87679.1"
                     /translation="MADLFDDAPNKTNKGANKSTGSSSSGKKSKKNKSYSAKDIEVLE
                     GLEPVRLRPGMYIGGTDERAVHHLVAELLDNSMDEAVAGEATRIDLELSADQYITVND
                     NGRGIPTDPHPKFKSKSALEVILTTLHSGGKFRAGAYETSGGLHGVGLSVVNALADDL
                     TVEIARDKKLWAQSFERGKPISKLKDGGKVSNRRGTLIRFHPDPKIFGSKVHFRPSTL
                     YRMARSKAYLFRGVEIRWKCDLKLLEKDEKTPETATLHFPGGLSDYLQSTLEERATIT
                     PNTFFGQAKLNGGSGTVEWAVAWPVDEDEFFNSYCNTVPTPQGGTHELGLRAALNKGL
                     KTYGELTKVKAATKINADDVVGGACIMLSVFIQDPQFQGQTKEKLATVEAQKLVESSV
                     GDHFDHWLSGDPETAKRLLEHVIERSQIRMKKRQDKVLKRQSATKRLRLPGKLADCTQ
                     NSAEGTEIFIVEGDSAGGSAKQGRDRKTQAILPLRGKILNVASASTDKLQANQEINDL
                     NEALGCGTGPHFRDDDLRYEKVIIMTDADVDGAHIASLLMTFFFKEMPQLIENGHLYI
                     AM"
     gene            1836..2240
                     /locus_tag="QF359_12020"
     CDS             1836..2240
                     /locus_tag="QF359_12020"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HJO87680.1"
                     /translation="MSDNKQDQKTETPEGERTITVVAQPADTNPSGDIFGGWILAQMD
                     VAGGVAASRCAQGRTVTIGVKEMEFHRPVRVGDLVSCYTQVLKVGRTSMSIKIETWTT
                     NHYNPTPLQKVTEGVFTYVAIDENRKPRPVNQ"
BASE COUNT          633 a          607 c          658 g          678 t
ORIGIN      
        1 catggcaata taaagatgtc cattttcaat gagttgtggc atttctttaa agaagaatgt
       61 catcaaaagt gaggcgatat gagcgccatc gacatcggca tcggtcatga taatgacctt
      121 ctcgtagcgc aaatcatcat cgcgaaaatg cggcccggtg ccgcagccca aagcttcgtt
      181 gagatcatta atttcctggt tggcctgcag cttatcagtg gaggcactgg ctacgttcaa
      241 aatcttacca cggagcggta aaatcgcctg ggttttccga tcgcggcctt gtttagcgga
      301 accgccggca gaatcacctt cgacgataaa aatctcggtg ccttcggcgg aattttgcgt
      361 gcaatcggca agtttgccag gcaggcgcag gcgtttggtc gccgattgcc gtttaagcac
      421 cttgtcctgg cgctttttca tgcggatttg tgagcgctca atgacgtgct cgagcaggcg
      481 cttggcggtt tccggatcgc cactgagcca atggtcaaaa tgatcgccga ccgagctttc
      541 aaccagtttt tgtgcttcga cggtggcgag tttttccttg gtttgccctt ggaactgagg
      601 atcctggata aacactgaga gcataatgca ggcgccaccg acgacatcat cagcgttgat
      661 cttggttgca gcttttactt ttgtcagctc gccataggtt ttaaggccct tattgagtgc
      721 cgcccgcagg ccgagctcgt gggtgccgcc ttgcggtgtc ggtacggtat tacaatagga
      781 attaaaaaac tcatcctcat ccaccggcca ggcaactgcc cattcgaccg tacctgaacc
      841 accattcagc ttggcttggc caaaaaaggt gttgggcgtg atagtggcgc gttcttccag
      901 cgtgctttgc agatagtcgc tcaaaccacc ggggaagtgg agagtggctg tttccggtgt
      961 tttttcgtct ttttcgagga gtttgaggtc gcatttccaa cggatttcaa cgccccggaa
     1021 caaataggcc ttggagcgcg ccatgcgata aagagtcgac gggcggaaat gtactttaga
     1081 gccgaaaatc ttggggtcgg gatgaaatct aatcaaagtt cctcgccggt tcgagacttt
     1141 accaccgtct ttgagtttgc ttataggttt accgcgttca aagctttggg cccagagctt
     1201 tttatcgcgg gcgatttcga cggtcagatc atcggcgagc gcgttaacga ccgagaggcc
     1261 aacgccgtgt aggccaccgg aggtttcata cgcgccagct ctaaattttc cacccgaatg
     1321 aagggtcgtc aggataactt cgagggcaga cttgcttttg aatttaggat gcgggtcggt
     1381 cggaatgccg cggccattat cgttgacggt gatgtattga tcggctgaaa gttccaaatc
     1441 gatgcgggtg gcttcgccgg cgaccgcctc atccatcgag ttatcaagaa gttcggcgac
     1501 caaatgatgg accgcccgct catcggtgcc gccgatatac atgccggggc gcagacgtac
     1561 cggttccaag ccttcgagaa cttcgatatc cttagcagaa taagatttat tttttttcga
     1621 ctttttacct gacgaactgg acccagtact tttattagcg cctttattgg ttttattggg
     1681 agcgtcgtcg aatagatcgg ccatgttgtt acctgtatta atatcttgcc ttattcgtca
     1741 ttatactgtg ttttatgtta gaactataac aatatcttgt gcctcagtag attatctgag
     1801 acaaggacaa acatcctgtt tttgaggaaa aatcgatgtc tgataataaa caagaccaaa
     1861 aaactgaaac tcctgaggga gagcggacta taacggtggt cgcccaaccg gctgatacca
     1921 atccaagtgg cgatattttt ggcggctgga tcttggcgca aatggatgtt gctggcggtg
     1981 ttgccgccag ccgctgcgcc cagggccgca cggtgacaat cggcgttaag gaaatggagt
     2041 ttcataggcc tgtacgtgtt ggtgatctgg tgagctgcta tacccaggtt cttaaagtag
     2101 gcagaacatc tatgtcgatt aaaatcgaaa cctggacgac caatcattat aatcccacgc
     2161 cgctgcaaaa agtgacggaa ggggtgttta cctatgtcgc aatagatgaa aatcgaaaac
     2221 cacgcccggt aaatcaataa gtggacactt aaatcagtta aatattagtt gttcgtttag
     2281 ttaccggcct gcagcgttca gatgattacc atccagacat acccggcggc aaaaaaggtg
     2341 ctgagggcag cgaattcttt aaaaaaaact ttggtatcca tgacaattct cctctttctg
     2401 gttaactgaa accggtttta aaccaaaaag aacaaaaaag caacatataa ttatttagtt
     2461 aataaaaaca attggttatt aaagtagtag cgtggtttcc tgctcgcctt acaagcccaa
     2521 tgcccagcgc tggggccacc atcgcctcat tcctgggcta cgcagttgaa cgcaat
//
LOCUS       DASCNL010000915         1209 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001865508, whole genome shotgun sequence.
ACCESSION   DASCNL010000915 DASCNL010000000
VERSION     DASCNL010000915.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001865508"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1203)
                     /locus_tag="QF359_12025"
     CDS             complement(<1..1203)
                     /locus_tag="QF359_12025"
                     /inference="COORDINATES: protein motif:HMM:NF025930.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HJO87681.1"
                     /translation="MSGADLLRRAMGKKIKAEMDAQRKTFVEGSVAKSVPEQKASDIF
                     DQVAKFAGYGFNKSHAAAYALVAFQTAYLKANYQVEFMAASMTLDMQNTDKLYTFKQE
                     LERLDIDLLPPNINKSDVMFKVEETADGDAVRYALAAIKNVGEGAMKTIIDDRDKNGD
                     YKDVSDLANRLDTKSINKRQIENLIRSGTLDVLNPNRKLILEGVGAIVNHAGAAQQER
                     ESDQIGLFGDEESAVINITLPEIADWLKTDRLKEEFDAIGFYLSAHPLDSYGKALERL
                     KISSYAQLEAANVSGPVKLAGMVISKKERISAKGNKYAFVQLSDSSGSFEITVFADVL
                     TANRELLEAGNKVIINASADNTDQFKLLANRVSSLDDATARTNAGLKIYIDDAAALGS
                     IKEVLEREG"
BASE COUNT          293 a          306 c          274 g          336 t
ORIGIN      
        1 cccttcccgc tccaaaactt ctttaatgga gccaagcgcc gccgcatcat caatatagat
       61 tttaagcccg gcattggtcc tggcagttgc gtcatctagc gaggagaccc gattggcaag
      121 cagtttgaac tgatcagtat tgtcggcgga ggcgttaata attactttgt tgccggcttc
      181 caatagttcc cggttggcgg ttaaaacgtc ggcaaacacc gtaatttcaa aagacccgga
      241 agaatccgaa agttgcacaa aggcatattt attacctttg gctgagatgc gctctttctt
      301 ggaaatcacc atgccggcaa gctttaccgg ccctgacaca ttggctgcct caagctgcgc
      361 ataggatgaa atcttgaggc gttccaacgc tttgccataa ctatccaaag gatgggctga
      421 gagataaaaa ccgatggcat caaactcttc tttcagccgg tctgtcttca gccagtctgc
      481 tatttccggc aaggtaatat tgatgaccgc actttcctca tcaccaaaca agccaatctg
      541 atcgctttcc cgttcttgct gggcggctcc ggcgtgattg acgatggctc caaccccttc
      601 aagtattagc ttgcggttag gatttagcac atccaaggtg ccggagcgga tcaggttttc
      661 aatctgacgc ttgttgattg attttgtatc cagccgattg gcgagatcac tgacatcttt
      721 gtagtctccg tttttatccc gatcatcgat gatggttttc atcgctcctt caccgacatt
      781 tttgattgcg gccagggcat aacggacggc atcgccatca gctgtttctt caaccttgaa
      841 cataacatcg gatttgttga tgttgggcgg cagcaaatca atatcaagac gttcgagctc
      901 ctgcttgaag gtatagagtt tatccgtatt ttgcatatca agcgtcatcg atgccgccat
      961 aaactctacc tggtaattgg cctttagata agctgtctga aaagcaacca aggcataggc
     1021 tgcggcatgc gatttgttaa agccataacc ggcaaactta gcgacctgat caaaaatatc
     1081 agatgctttt tgctccggta cacttttggc gaccgagcct tcgacaaagg ttttgcgctg
     1141 agcatccatt tccgctttga ttttcttacc catggcacgt cgcaacaaat cggcgccact
     1201 cagtgaata
//
LOCUS       DASCNL010000916         1226 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001866920, whole genome shotgun sequence.
ACCESSION   DASCNL010000916 DASCNL010000000
VERSION     DASCNL010000916.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1226)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001866920"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="QF359_12030"
     CDS             <1..204
                     /locus_tag="QF359_12030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase proteolytic subunit"
                     /protein_id="HJO87682.1"
                     /translation="GTGDVLEPEDGLIGIGSGGNYALAAARALTDRDDMNAEDIARKA
                     MEIAAGICVYTNENVVIEKLEAK"
     gene            211..>1226
                     /gene="hslU"
                     /locus_tag="QF359_12035"
     CDS             211..>1226
                     /gene="hslU"
                     /locus_tag="QF359_12035"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HJO87683.1"
                     /translation="MSSVPLTDTNSITAAKPANKKPATSSFSPREIVSELDRYIIGQN
                     DAKRAVAVALRNRWRRQQLDDDLREEVLPKNILMMGPTGVGKTEIARRLAKLAQAPFI
                     KIEATKFTEVGYVGRDVESIVRDLMETAIHECRERLRKQVIAKAEILAEERVLNALVG
                     DNASQDTRQKFRKMLREGELDEKEIEVDVVESNVAGMPTFDIPGMPGAQMGMLNIGNM
                     MGKAFGQQTTPKRMTVSDSYEILMDEESDKLLDEDLVIKEAADNVENNGIVFLDEIDK
                     ITARSDARGGDVSREGVQRDLLPLIEGTTVTTKYGTIKTDHILFIASGAFHLAKPADL
                     LPEL"
BASE COUNT          323 a          308 c          328 g          267 t
ORIGIN      
        1 ggcaccggtg atgtgctgga gcctgaagat ggcctgatcg gcatcggctc cggcggtaat
       61 tatgctttag cggcggctcg tgcactgaca gatcgcgatg atatgaacgc cgaagatatt
      121 gcccgcaaag cgatggaaat cgccgctggt atttgcgtct ataccaacga aaatgtcgtt
      181 atcgaaaaac ttgaagcgaa atgagctcaa atgtctagcg ttcccctaac tgataccaat
      241 tcaatcactg ccgcgaagcc ggcgaacaaa aaaccggcga cctcgagttt ctcgccccgg
      301 gaaatcgttt ccgagctcga ccgctatatc atcggccaaa acgatgcaaa gcgcgcggtt
      361 gccgtagctt tgcggaaccg ctggcggcgt cagcaattgg atgatgatct cagagaagaa
      421 gtgctgccaa aaaatattct gatgatgggc ccgaccgggg ttggtaaaac cgagattgcc
      481 cgccgactcg ccaaacttgc gcaggcgccg ttcatcaaaa tcgaagcaac taagtttacc
      541 gaagttggct atgtcggccg cgatgtcgag tccattgtac gtgatttgat ggaaaccgcc
      601 attcatgaat gccgagaacg tttgcgcaaa caggtaatcg caaaagccga aattctcgcc
      661 gaggagcgcg tgcttaatgc tttggtcggc gataacgcca gccaggacac tcgccagaag
      721 ttccgcaaga tgctgcgtga aggtgaactg gacgagaaag aaattgaagt cgatgttgtg
      781 gaatccaatg tcgccggcat gccaaccttt gatattccgg gcatgcccgg agcccaaatg
      841 ggcatgctca atataggtaa tatgatgggt aaagcctttg gccagcaaac cacgccgaaa
      901 cgcatgacgg tttctgattc ttatgaaatt ctaatggatg aagaaagcga taagctgctg
      961 gatgaagacc ttgtcatcaa ggaagctgcc gataatgttg aaaataacgg catcgttttc
     1021 ttagacgaga tcgataaaat caccgcccgc tctgatgccc ggggcggtga tgtcagccga
     1081 gaaggtgtgc agcgcgatct gctgcctctc attgagggta ccacagtgac gaccaaatac
     1141 ggcaccatta aaactgatca cattctgttt atcgcctcgg gcgcgtttca tctcgccaag
     1201 ccggccgatc ttttgcccga actcca
//
LOCUS       DASCNL010000917         2435 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001868837, whole genome shotgun sequence.
ACCESSION   DASCNL010000917 DASCNL010000000
VERSION     DASCNL010000917.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001868837"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2150)
                     /locus_tag="QF359_12040"
     CDS             complement(<1..2150)
                     /locus_tag="QF359_12040"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein"
                     /protein_id="HJO87684.1"
                     /translation="MAYKLIGKDFTPPDVLAKVTGKANYAEDMRADGMVFCRILGSPM
                     PHARVKNIDISEAKKVKGFLAVLTADKVPSFPPPNNPILNNEPRFIGEPILAVAAETE
                     LAAAEAVNKIKLDLEPLPFVTDPLESLFPRGPEARTNGNVANVRLKLQKIKWSAKDFA
                     SVREGQLPMGKPAEKWQFGDLDGNFKKADLVLDETFVTAGYSHHSMEPRSAMAYWQNG
                     KCYLFGSAQSQQFLIFGLSRYLGIKPPQLVYSGAFCGGGFGSKGGPYAEMSIPAHMSK
                     LLGGKPVLMRVSRAEEFAFGKGRPGFQGRLKIGFRKDGRILAADMFIVHDNGPNTGFW
                     DFRNAGSSFSIVFQPEAMRWQGISVLTNTSVRGPQRGPGENQTAAAVEPIIAKAARKL
                     GLDQVAIRRINAPDNNAKIGAKQGPVTSAYLKDALDKGAKMFNWDEKKKESGKQNGSK
                     VIGVGVGSAYHSAGAAGFDGLVRIMPDGKLHVHSGAGNLGTYSYAGTARAAAEVLGAN
                     WENVIIERGDSRKGLPFVLGQFGSNSLYTQTRTNWAAGMDAKAKLQEIAAKDLGGAPG
                     DYDTTDGKVFNKANSSKSMSWAQAAKRAIELGGKYSGKEMPKDINPITKWATASIAGS
                     GLIGVTKDKRPKKGVTPGLVTAFVKVEVDTETGKVEVLDHVEIADCGTAVHPASLATQ
                     IKGGAVMGYGMALSERYVFDPKLGMSFNGSLHNS"
     gene            complement(2152..>2435)
                     /locus_tag="QF359_12045"
     CDS             complement(2152..>2435)
                     /locus_tag="QF359_12045"
                     /inference="COORDINATES: protein motif:HMM:NF013923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJO87685.1"
                     /translation="TLTQSVGKGKVTTVEGVKGKDGGLHSVQKAMVEELAPQCGFCTS
                     GLIMSSVALLENNKNPTREEVRQGLSGNLCRCGAYDHYTNAVLRAAKEA"
BASE COUNT          584 a          674 c          577 g          600 t
ORIGIN      
        1 ctgctgttgt gcagactgcc attaaacgac atacccagct ttggatcgaa aacatagcgt
       61 tccgagagcg ccataccata acccataacc gcaccaccct taatctgtgt ggcgaggctg
      121 gcgggatgaa cggcagtgcc gcaatcggcg atttcgacgt gatccaaaac ctcgacttta
      181 ccggtctcgg tatccacttc gactttaaca aaagcagtca ccaagccagg cgtaacgcct
      241 tttttcggtc gtttgtcttt ggtgacgcca atcaaaccgg aaccggcaat acttgcggtt
      301 gcccatttgg ttatcggatt gatgtctttg ggcatttcct taccggaata tttaccgccc
      361 aattcaatcg cccgtttggc cgcttgcgcc caactcatcg atttagatga attagctttg
      421 ttgaacactt tgccatcggt ggtatcgtaa tcacctggag caccaccaag atcctttgca
      481 gcaatctcct gtagtttggc tttggcatcc atacccgcag cccagttcgt tcgagtctgc
      541 gtatatagag aattggagcc gaactgacca agcacaaacg gcaggccttt gcgggaatca
      601 ccgcgctcaa taatgacgtt ttcccaattt gcacccaaga cttccgccgc agcgcgagcc
      661 gttccggcat aggaatacgt acccaagtta ccagcaccag aatgaacatg aagtttgccg
      721 tctggcataa tgcggaccaa accatcaaag ccggcggcac cagctgagtg ataggctgag
      781 ccgacaccga caccaataac tttggagcca ttttgtttgc cgctttcctt ctttttctca
      841 tcccagttga acatcttggc gcctttatcc aaggcatctt taagatatgc actggtcacc
      901 gggccctgct tggcaccaat tttggcgttg ttatcaggcg cattaatgcg tcgaatagct
      961 acttggtcga gccccaattt tcgcgctgct ttggcgataa ttggttcgac cgccgcagcc
     1021 gtctggttct cacctgggcc acgttgcggt ccacgcaccg acgtattggt caacaccgat
     1081 ataccctgcc atcgcatcgc ttccggctgg aagacgattg agaacgacga cccggcatta
     1141 cggaaatccc agaaaccggt gttcggtcca ttgtcatgga cgataaacat atcggcagcc
     1201 aatatccggc catctttgcg gaaaccgatt ttcagccggc cttggaagcc aggacggcct
     1261 ttgccaaagg caaattcttc ggcgcggctg acgcgcatca gaaccggctt gccgcccagc
     1321 aatttggaca tatgcgcagg aattgacatt tcagcataag gcccaccttt tgagccaaaa
     1381 ccaccaccgc aaaaagcacc actataaacg agttgtggcg gcttgatgcc gagataacgc
     1441 gacaagccaa agatcaagaa ctgttgactt tgggctgaac cgaaaagata gcatttgcca
     1501 ttttgccaat aggccatagc ggagcgaggt tccatactat gatgcgaata accggcggtg
     1561 acaaaagttt catcaagaac gagatcagct ttcttgaaat tgccgtcaag atcaccgaac
     1621 tgccatttct ctgccggttt gcccatcggc aattggcctt ctcttaccga agcaaaatct
     1681 ttagccgacc acttgatttt ctgcagcttc aaccggacat tggcaacatt accgttggtc
     1741 cgggcttcgg gaccgcgtgg gaacaaactc tccaatggat cggtgacgaa aggcagtggt
     1801 tcaagatcaa gcttgatttt gttaaccgcc tctgcagcag caagctcggt ttcagcggca
     1861 accgccaaaa ttggctcgcc aataaagcgc ggctcgttgt tgaggatcgg attattcggg
     1921 ggcgggaagg acggcacctt atccgcggtc aaaaccgcca gaaagccttt aaccttttta
     1981 gcttccgaaa tatcaatgtt tttcacccgt gcgtgcggca ttgggctgcc gagaatgcga
     2041 caaaaaacca tgccatctgc ccgcatatct tctgcgtaat ttgctttacc cgttaccttg
     2101 gcgaggacgt caggtggggt gaagtcttta ccgattaatt tataagccat tttacgcctc
     2161 cttcgccgca cgtagcacgg cgttcgtata atgatcataa gcaccacagc ggcagagatt
     2221 gccggacagg ccttgacgaa cttcttcgcg cgtcgggttt ttgttatttt ctaacagcgc
     2281 cacactcgac ataatcagac ctgaagtgca gaagccgcac tgtggagcta attcttcaac
     2341 catggctttt tggaccgaat ggagaccgcc atctttaccc tttacacctt caaccgtggt
     2401 tactttacct ttgccaacac tctgggtcag ggtcg
//
LOCUS       DASCNL010000918         2173 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001869104, whole genome shotgun sequence.
ACCESSION   DASCNL010000918 DASCNL010000000
VERSION     DASCNL010000918.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001869104"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..400)
                     /locus_tag="QF359_12050"
     CDS             complement(<1..400)
                     /locus_tag="QF359_12050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87686.1"
                     /translation="MFQIVQKIILISLALMVSACGATFDYDALRQQNGEGGNFSVELG
                     RAYKKFAISEHDDMVDLIDGAHFGEKARQAFASQAVAPENVEDWWLTKDQQEMFKGAR
                     ERLVYILDRHSKVKLPKVAAAAQVNFDCWIE"
     gene            complement(966..1925)
                     /locus_tag="QF359_12055"
     CDS             complement(966..1925)
                     /locus_tag="QF359_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HJO87687.1"
                     /translation="MPDDLSTAPLLDPRKFQNPDITIDGTERAVVGLTHLRTLWFNTG
                     TLCNLTCLDCYIESSPTNDGLAYLSKAEVVSYLDEIETTGQKVEEIAFTGGESFMNPN
                     IMAMVEVSLERGFDVLVLTNAMKPMQYKKQQLLMLKERFGGKLSLRISIDHYTPARHE
                     ELRGKDSWQRMIDGLTWAAENDLNIAAAGRARWGENEADVRAAYAQLFDELMIDIDAD
                     DPLALVLFPEMNKGLDVPEITVACWDLLGVRPDTMMCATSRMIVKRKGAESPVVTPCT
                     LLPYDTQFELGHGLSEAVKLVKLNHPHCARFCVLGRGSCNVAD"
BASE COUNT          586 a          554 c          490 g          543 t
ORIGIN      
        1 gctcgatcca gcagtcaaaa ttaacctgcg ctgcggcggc aactttgggc agtttaactt
       61 tagaatggcg gtcaagaatg tacacgagac gttcacgcgc acctttaaac atctcttgtt
      121 gatccttggt cagccaccaa tcttctacat tttccggggc cacggcttgg ctagcaaaag
      181 cctgccgtgc tttctcgcca aaatgcgcgc catcgattaa atccaccatg tcatcatgtt
      241 cagatatggc aaatttcttg taagcgcggc caagttcaac cgaaaaatta ccaccctcac
      301 cgttttgctg gcgcagtgca tcgtagtcaa atgtcgcacc acaggcggaa accataagtg
      361 ctaggctgat taatatgatt ttttgtacga tctggaacat acctgtctct ccggtaaatt
      421 ttttagacag gcaaaatcac aatcaaccga ggcactgaga aggcacaata aggcagcaaa
      481 gtgacaatcc cggggtatta atttgtcacg aacataattg gcgtgctcag atcaatcgcc
      541 taaccggttg ccggtctttc ggcttcaggc aggacttcaa ggttcggtca cagaccattc
      601 tcgaggcagt ccgcgtagct cgtgggcaaa tcttcgtggc gtattttttg tgctgttcca
      661 gtagcatctt aggtgaacgc gtgatatcga aattccaagg tactatccat gggtgtcaag
      721 atgctgtagc acactctggg cgtatcatca ttggccggca tgccgataac ccccagatta
      781 tgccaaagct tattatctaa aacataggtg aatggcaggc ctcaatgacc accgataacg
      841 ccatcacaat tcgccagatt aatttcatcg gtcagcacta atctaggcgt tgatgcaaaa
      901 acaaattagg ctattcggaa acactgccgt ggacaacctt cagcttaagc ccaacatttt
      961 taagcttaat cagcgacatt gcaagagcca cggcccaaca cacaaaagcg ggcgcaatgg
     1021 ggatggttga gcttcaccaa tttaaccgct tcggagagac cgtggccaag ttcaaattgg
     1081 gtgtcatagg gtaataatgt gcaaggagtt acgaccgggc tttcagcacc tttccgcttc
     1141 acaatcatcc gtgatgtcgc acacatcatg gtatccggcc ggacccccaa tagatcccag
     1201 caggcgacgg tgatttcggg gacatcaaga cccttattca tttccggaaa caacaccagc
     1261 gccaatggat catcagcatc aatatcaatc attaattcat cgaacaattg agcataagcg
     1321 gcgcggacat cggcttcgtt ctcgccccaa cgtgcccgtc cagctgccgc gatgttaagg
     1381 tcattttctg ccgcccaagt tagcccgtcg atcatccgct gccagctatc cttgccgcgc
     1441 aattcttcgt gtctcgccgg cgtataatga tcgatggaaa tccgcaggct tagtttgccg
     1501 ccgaaccgtt ctttcaacat caacagttgt tgctttttgt actgcattgg cttcatcgca
     1561 ttggtcaaca ccaggacatc aaaaccgcgc tcaagcgaga cttcgaccat cgccatgata
     1621 ttgggattca taaacgactc accgccggta aaggctatct cttcgacttt ttgaccggtg
     1681 gtttcaattt catcgagata ggaaacgact tctgccttac taagataagc gagaccgtcg
     1741 ttggtcggcg aagattcaat atagcaatcc agacacgtga gattacaaag cgtgccagta
     1801 ttgaaccaaa gtgtgcggag atgtgtaaga ccgacaaccg cccgctcggt gccatcaatc
     1861 gtaatatccg ggttttgaaa cttgcgagga tctagcaatg gtgcggtcga taaatcgtca
     1921 ggcatagagg ccatctttct gcaataataa taggcttaat ttagatacga cacaccggaa
     1981 tgcaaatcaa gaaaccgtta tctggggcaa taacgagccc aaggattttc caactaattt
     2041 tgaaattctc gatggccccg gcatgcatta ggttaggcgg ctaaaacagg acttgtttca
     2101 ctgttctaac aagatcactt aaatttccta aaattcgtca aggccagggt atattttgga
     2161 cgaacacgac atc
//
LOCUS       DASCNL010000919         1477 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001869593, whole genome shotgun sequence.
ACCESSION   DASCNL010000919 DASCNL010000000
VERSION     DASCNL010000919.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001869593"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="QF359_12060"
     CDS             <1..249
                     /locus_tag="QF359_12060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87688.1"
                     /translation="FSYKWIGILTNLIGICAVWFLVVRYTIFVFEQEGVTEIREWSWW
                     WLGVVLSVLSFFAILLAIRAISAPIRDKPVDLPGSHEA"
     gene            262..>1477
                     /locus_tag="QF359_12065"
     CDS             262..>1477
                     /locus_tag="QF359_12065"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO87689.1"
                     /translation="MVISLVGFAVILGLSFLGIPLAYATLAVGFFGFAYLRGFDAAII
                     ASGQEIFEFSANFGLSVVPLFILMGTLIQRANISDELYEAGYAWVGKLRGGLAMATVL
                     SCAGFSAVSGSSLATAATMAKVAMPPMRRYKYHDSLSAGTLAAGGTLGIMIPPSVPMI
                     IYGIVTETNIGALFIAGILPGLLLTVSYLAAIYFRVSLNPKLGPPGDDVSMSEKLRTL
                     SRTWPIIVLFSLVLGGIYLGVFTPTEAGAVGSVGGFLFALSRGRMWSIKDNIEVFTDA
                     FVTTAKIFTIGFAALTFGQFMNFAGMSAALVQFTDALDLGPIGLPVMISLICVLLGMV
                     FESIGILLLIIPVFLPSLEVAGIDMIWFGIVVIIVVELGLITPPIGINVFTVKSVIPD
                     VDLGKIFAGVVPF"
BASE COUNT          257 a          382 c          415 g          423 t
ORIGIN      
        1 ttcagctata aatggattgg aatcctcaca aatttgatcg gcatctgcgc cgtttggttt
       61 cttgtcgttc ggtacacaat cttcgtgttt gagcaggaag gcgtcacgga gatcagggaa
      121 tggtcatggt ggtggttggg ggttgtcctt tcagtattaa gttttttcgc cattttgctg
      181 gccatccgcg cgatctcggc gccaatccgg gataagccgg tggaccttcc gggatcacac
      241 gaggcctaag gtgattgcgc gatggtaatc tctttggtcg gttttgccgt catcttgggc
      301 ttaagctttc tcgggattcc gctcgcctat gccacgcttg cggtaggatt ttttggcttc
      361 gcgtatcttc gcgggtttga cgccgccatc attgcttcgg gacaggagat atttgaattt
      421 tcggccaact tcggattgtc cgtcgtcccc ctcttcatct tgatgggtac gcttatccaa
      481 agagctaaca tatcggatga actctacgag gcgggctatg cctgggtcgg aaaactgcgt
      541 ggcgggttgg cgatggcaac cgtcctgtcg tgtgccgggt tttcggccgt cagcggaagt
      601 tctctggcaa cagccgcaac catggcgaag gtcgccatgc cacccatgcg ccgttacaaa
      661 taccacgact cgctgtcggc cggcacgctc gcagccggcg gtacgctcgg catcatgatc
      721 ccgccaagcg tgccaatgat catctacggt attgtgacgg aaaccaacat cggcgccttg
      781 ttcattgcgg ggattctgcc cggtttgctc ctcaccgttt cctatctcgc cgcaatctac
      841 tttcgtgtgt cgctcaaccc caaattgggg ccgcctggtg acgacgtttc aatgtctgag
      901 aaattgcgca ccctgtctcg aacctggccg atcatcgtgt tgttcagctt agttctcggc
      961 gggatctatc ttggtgtctt tacaccgacc gaggccggtg cggtcggctc ggtggggggc
     1021 tttctcttcg ctctctcgcg cggccgaatg tggagcatta aggacaacat cgaagtattc
     1081 accgacgctt ttgtcacgac ggcgaagatt tttacgatcg gatttgcagc actcactttc
     1141 ggtcaattca tgaattttgc ggggatgtcc gcggcccttg tgcaattcac ggacgcgctt
     1201 gatttggggc ccatcggact gccggtgatg atttctctga tttgcgttct gctcggaatg
     1261 gtgtttgaaa gcattggcat tttactgctg atcatcccgg tgttcttgcc ctctcttgag
     1321 gttgcaggga tcgacatgat ttggtttggc attgtcgtga ttatcgttgt cgagttggga
     1381 ctgatcacgc cgcccatcgg aatcaacgtg ttcacggtta aatcggttat acccgatgtc
     1441 gatcttggga aaatatttgc tggcgtcgtt ccgttcg
//
LOCUS       DASCNL010000920         1905 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001870844, whole genome shotgun sequence.
ACCESSION   DASCNL010000920 DASCNL010000000
VERSION     DASCNL010000920.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001870844"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="QF359_12070"
     CDS             <1..264
                     /locus_tag="QF359_12070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87690.1"
                     /translation="DNQSVTVELPLTNGNKILTVHKDAVIRRANGNIVFVVSGSSATM
                     HNVQLGRGVGDKFQVLKGLKTGDKVVIRGNERLGAGGRVKIVQ"
     gene            278..>1905
                     /locus_tag="QF359_12075"
     CDS             278..>1905
                     /locus_tag="QF359_12075"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJO87691.1"
                     /translation="MNIIQLSIQRPIAVVAMVLMIVLFGWVSLNKIPIQMSPDVRQPV
                     IIIKTSWRGASPNEVEREIVSKQEEELKGIEGLKRIVGEAKHNESVVTLEFAPGLDFN
                     RILLLTANRLDRVTGYPAEADEPVIGTSGTEDNAIAYFSLRRMDGNERAMSTYGDFLR
                     DVIRERFESIPGVSGVNLFGENEREIQIVVDPEKLAHYRMTISEIVAKLRAENASITG
                     GDVNEGKRRYVVRTEGELKSPDEVRSILLRSESKNGSGSGLGRVTLADVAQVQVSYKE
                     AFARARMKGVPTLALNLTREQGANVLETMKDVRRVADDLANGPVRLAGLRMQQMYDET
                     DYINSAIDLVIQNIYIGGGLAILILLLFLRSWRPTIVIGAAIPVSVIGTFVAMAALGR
                     SLNVVSLAGIAFAVGMVVDAAIVVLENIFRLRQQGMSASEAAYKGTSQVWPAVLVSSL
                     TTVMVFIPILFMELEAGQLFRDIGVAISVSVMLSLFVSITLIPALSNRVFSSAAFDEG
                     KGLHLPGIDAFATGFTNFWVGFAGYVANRKFQAVG"
BASE COUNT          446 a          423 c          526 g          510 t
ORIGIN      
        1 gacaatcaaa gcgtcacggt tgaattgcct ttgaccaatg gaaataaaat tctaacggtt
       61 cataaagatg cggtaatccg ccgagcaaat ggaaatatcg tgtttgttgt ctcaggttcc
      121 agcgcaacca tgcacaatgt ccaattgggg cgcggcgtcg gcgacaaatt ccaggttctg
      181 aaggggctca aaacgggcga caaagtagtc atccgaggta acgagcgact cggtgccggt
      241 ggccgcgtaa aaatagttca ataaatagga gagttagatg aatattatcc aactctcaat
      301 ccagcgcccc atcgccgttg ttgcaatggt attgatgatc gtgcttttcg gctgggtctc
      361 gctgaataaa attcccattc aaatgtctcc agacgttcgc caaccggtga tcatcatcaa
      421 aaccagttgg cgaggcgcct ctcccaacga agtcgagcgg gaaattgtgt ccaagcagga
      481 ggaagaactt aaaggcattg aagggctcaa gcgcattgtc ggtgaagcca aacataatga
      541 aagtgtcgtt acccttgaat ttgctccggg cttggatttc aatcgtatcc ttttgctaac
      601 ggccaatcgt ttggatcgtg tgactggtta tccggctgag gctgatgaac cggtgatcgg
      661 cacttccggc acggaggaca acgcaattgc ctattttagc ctgcggcgca tggacggcaa
      721 tgagcgcgca atgtcaactt atggcgattt cctgcgtgat gttattcgag agcgttttga
      781 aagcataccg ggtgtcagtg gggtaaatct ttttggcgaa aatgaacgtg aaattcaaat
      841 cgtcgttgat ccggaaaaat tagcccatta ccgcatgacg atctctgaga ttgtcgccaa
      901 gctgcgagct gagaacgcgt ccattacggg cggtgacgtc aatgaaggaa agcgccgcta
      961 tgttgtgcgc accgaggggg agctgaagtc gccagatgaa gttcgcagta tattgttacg
     1021 cagtgagtca aaaaacggca gtggtagcgg tctcggtcga gttaccttag cagatgtcgc
     1081 tcaagttcag gtttcttaca aggaagcctt tgcccgggcc cgaatgaagg gtgtacccac
     1141 cttagctttg aatttaaccc gcgagcaagg cgcgaatgtg cttgagacca tgaaggatgt
     1201 ccggcgagtt gcggatgatc tggcaaatgg gccggtgcgt ctggccggcc tccgtatgca
     1261 gcagatgtat gatgaaactg attatataaa ttcggccatc gatctcgtaa ttcaaaacat
     1321 ttatatcggc ggtggtttag cgatcctaat tctattgttg tttctgcgct cgtggcgacc
     1381 gacgattgtt attggggcgg ctattcctgt ttcagtgatc ggcacttttg tcgccatggc
     1441 agcgcttggc cgttcgttaa acgttgtcag cttggcggga atagcgtttg ccgtcggtat
     1501 ggtggtcgat gcggccatcg ttgtattaga aaatatattc cgcctgcgtc agcagggtat
     1561 gagcgcatca gaagcggctt ataaaggcac gtcccaggtc tggccggccg ttttggtatc
     1621 atcactgact acggtaatgg tgtttattcc aatcctgttt atggaattgg aagcgggcca
     1681 gttattccgc gatatcggcg tcgccatatc tgtctcggta atgttgtctc tatttgtttc
     1741 aattacgcta attccagcac tttcgaatcg cgtattttca agcgctgcct ttgatgaagg
     1801 caaggggttg catctgcctg gtatcgacgc ttttgccacc ggttttacta atttctgggt
     1861 aggctttgct ggttatgttg cgaaccgtaa gtttcaggcg gttgg
//
LOCUS       DASCNL010000921         1671 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001871380, whole genome shotgun sequence.
ACCESSION   DASCNL010000921 DASCNL010000000
VERSION     DASCNL010000921.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001871380"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            196..1497
                     /locus_tag="QF359_12080"
     CDS             196..1497
                     /locus_tag="QF359_12080"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO87692.1"
                     /translation="MAPEIIGLIGVLILLGLTMIRMPIGLALGSVGIFGTWYLLGWDT
                     MVFALGDAPVAAMSNYTLSVLPLFILMGIVAARAGFANALYQAAFAFVGHRKGGLAIS
                     SIIACGGFGAVCGSSLATVATMSNVAVPSMLRYGYSPQLAAGSVATGATLAILIPPSL
                     PMIIYAYLTEVSIGKLFAAGIIPGILGVILYAVTISIWTHFNPKAGAGGERMNWSKRL
                     QSLKGVWAVVVLFVAVLGGIFAGIFSPTEGAAVGAFGAIFLGFIARSFTLRLLIRSIA
                     ETVVLSSSILFIVIGVSLFNFFITGAMFPQALSAFLDDINLPPLVTLAGITLVLIILG
                     CFLEVMAIIFITTPVLFPAMMALGYDPVWYGILTMMVVEIGAVTPPIGMNIFVLAKQL
                     KDVSAKQVFQGIIPFLAADFVRLFIIIAFPGLVLWLPSLLF"
BASE COUNT          337 a          412 c          429 g          493 t
ORIGIN      
        1 cgcactgtaa cgatggccga tgataaactc ctcaatgccc tcaaggccaa actggcaccc
       61 gttactgaaa attacttggc tggacttgaa gccaaaggta tgccagcccg caaagtgcat
      121 gccgcaattc agaaagcggt caaggaagaa gaggcaaaat aagcgcttct tagccgcaaa
      181 ctagtaggca caatagtggc tcccgaaata atcggattga tcggtgttct gatccttctt
      241 gggctgacca tgatcagaat gccgatcgga ctcgctttgg gctcggtcgg tattttcggc
      301 acatggtatt tgctcggttg ggacaccatg gtgttcgcgc tcggtgatgc tcctgtcgcc
      361 gctatgagca actacacatt gtcagttttg cccctgttca tcttgatggg catcgttgcg
      421 gcccgcgccg gttttgccaa cgccctctat caagctgcct tcgcttttgt cggccaccgc
      481 aaaggcggtt tggcaatttc aagtatcatt gcctgtggtg gtttcggcgc cgtatgcggc
      541 tccagcctgg cgaccgtcgc caccatgagt aacgtcgccg tgccctccat gttgcgctat
      601 ggatattctc ctcaactggc ggcaggatcg gttgccaccg gcgcgacctt ggctattcta
      661 atccctccgt ctctgcccat gattatctat gcctacttaa cggaagtctc aatcggcaag
      721 ctgttcgcag ccggtataat tccaggtatt ttgggcgtca ttctctatgc cgtgaccatc
      781 agcatctgga cgcactttaa ccccaaagcc ggggcgggcg gcgaaaggat gaactggtcg
      841 aaacgattac aaagcctcaa aggtgtttgg gcggttgtgg tgcttttcgt tgcagtgtta
      901 ggtggtattt ttgcgggaat tttttccccg accgaaggtg ctgccgtcgg agcctttggc
      961 gcaattttct tgggctttat tgcacgtagt tttacgctgc gtttattgat ccggtcaata
     1021 gcggaaacgg tcgttttatc gtcttcgata ttgtttatcg ttatcggagt ctccctgttc
     1081 aattttttca tcaccggcgc gatgttcccc caagcgttat cggctttcct tgatgacatt
     1141 aacttaccgc cgttggtgac gcttgccggc atcaccttgg tgctgataat tttgggctgt
     1201 tttctggaag tcatggcgat tatattcatc actacgccag tactctttcc ggccatgatg
     1261 gcgcttggct atgatccggt ttggtatggt atattaacca tgatggttgt cgaaatcggc
     1321 gctgtcacgc cccccatcgg catgaatata tttgttttgg ctaagcagtt gaaagacgta
     1381 agtgcaaaac aggttttcca aggtatcatc ccgtttctag cggcggattt cgtcaggctg
     1441 tttattatca ttgcatttcc agggctggtg ctttggttgc cgtccctgtt gttttaacct
     1501 tcgaattgga aaaaacgaat gaagaactta ctcaatttga taacaaatat tccccgggca
     1561 atggcgtttg tcgccgggtg cgcaattacc gttttgatgt tgatgaccgt gggagacata
     1621 tttggccgga cgttcggttt tttcttttta caaggtctga tcgaagtctc a
//
LOCUS       DASCNL010000922         2942 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001872523, whole genome shotgun sequence.
ACCESSION   DASCNL010000922 DASCNL010000000
VERSION     DASCNL010000922.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001872523"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..911)
                     /locus_tag="QF359_12085"
     CDS             complement(<1..911)
                     /locus_tag="QF359_12085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HJO87693.1"
                     /translation="MFYTRPHSTATWGTMAKDWEAGVDYRKLVAERTERARQAITDAG
                     LAAVICFNFDNIRYITATHIGEWARDKFDRYCLLGQEGSPFLWDPASPAKRKSSPWLG
                     NNVDAPVSTMQGALPPILGIQDVFAKQIKEKLTDMGIEKEPIGIDVMELPMMRALERQ
                     GIELVDGQQALMDAREIKTDEEIELLKQAAAMVDGVYLDIAKAIRPGARESDLVAVAN
                     DQLYAMGSERVECVNSVAGPRGAPHSHTFSDRMIQPGDMIFLDIMNSLNGYHTCYYRT
                     FICGIPNEAQKEAYEQCSQWVNAALEV"
     gene            1179..2231
                     /locus_tag="QF359_12090"
     CDS             1179..2231
                     /locus_tag="QF359_12090"
                     /inference="COORDINATES: protein motif:HMM:NF012880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HJO87694.1"
                     /translation="MVKKATAKKKTQEKSMAKKAWLNDDIGEENRLTMWRLQLEVRHV
                     EQRLHDLFFQNLIKGTSHLAIGQEAISAGFGAAMRQDDYTFCTYRGHAHTLVRGASMT
                     GMIGELMGKECGMLKGKGGSMHLTDVEKGAMGSYAIIGAHLPIAAGAAWQAQYNKTGQ
                     IAACFFGDGATNIGAFHEALNFAVIWNLPVVYVCENNLYMEYTPISEVTAVEHPAADR
                     ACAYGLPSIIVDGNDADAVFRVAMTAFDKARAGGGPSLIEAKTYRYSGHSRADPATYR
                     PDGELDEWMKKDPIPMYRQRLLDFGVKEDVVSSIEEAVLKAVDEATEEAKASPPPPLE
                     SAYTDVWADGGVSWRN"
     gene            2219..>2942
                     /locus_tag="QF359_12095"
     CDS             2219..>2942
                     /locus_tag="QF359_12095"
                     /inference="COORDINATES: protein motif:HMM:NF014798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HJO87695.1"
                     /translation="MAELTYREAVIEGIAQEMRRDNKVVFLGEDIGKAGGVFKATVGL
                     WDEFGDLRVRDTPISEQAILGAAMGAAMTGLRPIAEIMFSDFLAVCWDIVTNQIAKSR
                     YMTGGQVDVPLVIRTANGGGVRFGAQHSQSVENWAMMIPGIKVVVPSTPADVKGLLAA
                     AIRDPDPVIFFEQKALYATKGEVPDGEHVDEIGKAKVVREGDDVTILALALMVPRALE
                     AADRLQAEVGISANVVDIRSLVP"
BASE COUNT          690 a          707 c          826 g          719 t
ORIGIN      
        1 ataacttcca aggctgcatt gacccattgg gaacattgct cataggcttc cttttgcgct
       61 tcgttgggaa taccgcagat aaaggtgcgg taatagcagg tgtggtagcc gttgagactg
      121 ttcatgatat ccaagaagat catatcgccc ggttggatca tccggtccga gaaagtgtgc
      181 gagtggggcg caccacgtgg gcctgctacc gagttcacac attcaacgcg ctccgagccc
      241 atagcataaa gctggtcatt agcaacagcg acgagatcac tttcccgggc gcccgggcgg
      301 attgctttgg cgatatcgag ataaacgcca tcgaccatgg cagcagcttg cttgagaagc
      361 tcaatttctt cgtcggtttt aatttcgcgg gcatccatca aggcttgctg gccatcgacc
      421 aattcaatgc cttgccgttc tagcgcccgc atcatcggca gttccatgac atcgatgccg
      481 atcggctctt tttcgatacc catatcggtc aatttctcct tgatctgctt ggcaaagaca
      541 tcttggatgc cgagtattgg cggcagggcg ccttgcatgg tggaaaccgg cgcatcgaca
      601 ttattaccga gccagggaga gcttttgcgt ttggcaggcg atgctggatc ccacaagaag
      661 gggctgcctt cctgaccgag caaacaatag cggtcgaatt tatcgcgggc ccactcaccg
      721 atatgggtag cggtaatgta gcgaatatta tcaaagttga agcaaatgac agccgctaaa
      781 ccggcatcgg taatggcttg tctggcgcgt tcggtgcgtt cggcaacgag tttgcggtaa
      841 tcgacaccgg cttcccagtc tttggccatg gtgccccagg tggcggtgga atgtggtcgc
      901 gtataaaaca tttaattctc cctaatgtgc tttttgcttc tctacttcgg atatctcaac
      961 agaaaacttt caaaaacacc aaaataaaaa cctaaatata taggtttcgt ctagtgagaa
     1021 cctatcattt atgtggtccg ccttgaatgt ctctttactc catttgttga caaatttccg
     1081 tgtctgtgga attatcctcg aaatctatgc aaacgattgc ataaaaattg acttacggca
     1141 agaggcgatt agttgaatta ttttagagag gcaatctcgt ggtaaaaaaa gcaaccgcaa
     1201 aaaagaaaac ccaagaaaaa tccatggcta agaaggcgtg gctgaatgat gatattggtg
     1261 aagaaaatcg cctgaccatg tggcgcttgc aactggaagt acgtcatgtt gaacagcgcc
     1321 tccacgatct gttttttcaa aacttaatca aaggcaccag ccatctggcg attggccagg
     1381 aggcgatttc ggctggtttt ggtgctgcca tgcgccagga tgattatacc ttctgtacct
     1441 atcgtgggca tgcccatact ttggtgcgtg gcgcctcgat gaccggcatg atcggcgaac
     1501 taatgggcaa ggaatgcggc atgttgaagg gcaaaggcgg ctccatgcat ttgaccgatg
     1561 tcgaaaaggg cgccatgggc tcctatgcta ttattggcgc ccacctgcca atagccgctg
     1621 gggccgcctg gcaggcgcaa tacaacaaga ccggccagat tgcggcgtgc ttctttggcg
     1681 atggtgcgac caatattggc gccttccacg aagcattgaa ctttgccgtg atttggaatc
     1741 tgccggtggt ctacgtctgt gaaaacaatc tctatatgga atacacgccg atcagtgaag
     1801 tgacagcggt tgagcatccg gccgcggacc gggcgtgtgc ctatggcctg ccatcgatta
     1861 ttgttgatgg taatgatgcg gacgcagtgt tccgggtggc gatgacggcg ttcgacaaag
     1921 cgcgtgccgg tggcggacct tccttgatcg aggccaaaac ttatcgttac tcggggcact
     1981 cccgggctga tcccgcgacc taccggccag acggcgagct cgatgagtgg atgaagaaag
     2041 atccgatccc gatgtatcgc caacgtctgc tcgattttgg cgttaaagaa gatgtcgtca
     2101 gcagtatcga agaagctgta ttaaaagctg tcgatgaggc gaccgaagag gctaaagcct
     2161 caccgccgcc acctttggaa tccgcctata cagatgtttg ggctgatgga ggtgtgtcat
     2221 ggcggaacta acctaccggg aagcggtgat cgagggcatt gcccaggaaa tgcgccggga
     2281 taataaagtt gttttcttgg gcgaggatat cggcaaagcg ggcggcgtgt ttaaggcaac
     2341 cgtcgggctc tgggatgaat ttggtgatct ccgcgtgcgc gatacgccga tctccgaaca
     2401 ggcgattttg ggtgccgcca tgggtgcagc gatgaccggc ctcaggccga tcgctgaaat
     2461 tatgttttcg gactttcttg ccgtctgctg ggatattgtc accaaccaaa ttgctaaatc
     2521 ccgctacatg accggtggac aggttgatgt ccccttggta atccggaccg ctaatggtgg
     2581 tggagtgcga tttggcgctc agcattcgca aagcgttgaa aactgggcaa tgatgattcc
     2641 cggcattaaa gttgtggtgc cctcgacacc agccgatgtt aaaggtttgc tggcggctgc
     2701 tatccgtgat ccggacccag tgattttctt tgaacaaaaa gccctctatg cgactaaagg
     2761 cgaagtgccc gacggtgaac atgttgatga aatcggcaaa gctaaagtgg tgcgtgaagg
     2821 tgatgatgtg acgatattgg cgcttgcttt aatggtgccg cgcgctcttg aagcggcgga
     2881 ccgtctgcag gccgaagttg gaatttcggc caatgtggtt gatatcagaa gcctggtgcc
     2941 gc
//
LOCUS       DASCNL010000923         1005 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001878459, whole genome shotgun sequence.
ACCESSION   DASCNL010000923 DASCNL010000000
VERSION     DASCNL010000923.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001878459"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            293..>1005
                     /locus_tag="QF359_12100"
     CDS             293..>1005
                     /locus_tag="QF359_12100"
                     /inference="COORDINATES: protein motif:HMM:NF021423.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HJO87696.1"
                     /translation="MTNWIVARAQQGITASYSQIEIGGFPSNFRVVLTDPKLHTANFA
                     AAGQSEQGAEKWFWQGQRVVAEMKPWNFKKFSVDLSGVHNLAFKNQNRDYQFSGEVQK
                     MVMAANIFSDGWPRLMQLEIGDLSMSESRSRAKVTASSATVASRRLLPGKEQINSPAK
                     TPIFTLKIKFQGLHLPQFLNLPLGYDIEELSSELKVIGKFTLSSSVVNLARWRDAGGI
                     IEIDTIQGTYGALKMHAAGT"
BASE COUNT          268 a          209 c          251 g          277 t
ORIGIN      
        1 tggtctagat tacggcctcg cgccgatgtg tccaaccatt tatagaaata atcgaatgcc
       61 gatagattgc taatgttggg agttgttgat ggccaatagt cagaagaatt tgcgcacacg
      121 acgtgcagtt ccactcggct catcaactca gcgtcatgcc gccctcgaat accaaccacc
      181 aaaacttttt aaagttttcc ggaatttttt tgtccttggt atcgtcgttg tgatgaccgc
      241 agttggttac accttgtact ggtttgtcat tgccaccaat cttaaagacg cggtgacgaa
      301 ctggattgtt gcacgtgctc aacaaggtat tacagcatca tatagccaga ttgaaatcgg
      361 cggatttcca tcaaatttta gagttgtgct aactgatcca aaactgcata ccgcaaattt
      421 tgctgcggcg ggccaatcgg aacaaggtgc tgagaaatgg ttctggcaag gtcagcgtgt
      481 ggttgccgaa atgaaaccat ggaattttaa gaaatttagc gttgatcttt cgggcgtgca
      541 taacctggcc tttaaaaatc agaaccggga ttatcaattt agcggcgagg tgcaaaagat
      601 ggttatggcg gctaatattt tttccgatgg ctggccgagg ttgatgcaat tggaaatcgg
      661 tgatcttagt atgtcagaat ctcgatctag agccaaagtc acggcaagtt cagccaccgt
      721 cgccagccgt cgtttattgc ccggcaagga acagataaac agcccggcaa aaacgccgat
      781 ttttactctg aagataaaat ttcaaggatt gcatttaccc caatttttga atttgccact
      841 ggggtacgac attgaggagt tgtcatcaga gttgaaagtt attggtaaat ttacgctttc
      901 aagctcggtg gtgaatcttg cgcgttggcg agatgcaggt ggtatcattg aaattgatac
      961 catccagggg acgtatggcg cgttaaaaat gcatgccgcg gggac
//
LOCUS       DASCNL010000924         1529 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001884584, whole genome shotgun sequence.
ACCESSION   DASCNL010000924 DASCNL010000000
VERSION     DASCNL010000924.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001884584"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="QF359_12105"
     CDS             complement(<1..202)
                     /locus_tag="QF359_12105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87697.1"
                     /translation="MDLGLKGKNAAITGSSQGIGHAIASSLADEGCNVALSARNQDRL
                     DQAVGEMEAKGVKAVGIICDLSA"
     gene            complement(236..523)
                     /locus_tag="QF359_12110"
     CDS             complement(236..523)
                     /locus_tag="QF359_12110"
                     /inference="COORDINATES: protein motif:HMM:NF015735.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HJO87698.1"
                     /translation="MLFTIFCIDKPGVTEKRAAAMPGHVEYLKKSAIKNVMSGPLMDD
                     AMENVVGSLYVVDAPDRAAVEAFQKDDPLVQADIWESIEVRAFNKRVDNRD"
     gene            complement(544..>1529)
                     /locus_tag="QF359_12115"
     CDS             complement(544..>1529)
                     /locus_tag="QF359_12115"
                     /inference="COORDINATES: protein motif:HMM:NF014542.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HJO87699.1"
                     /translation="VERSDENVIQLANGCLCCSVKGDLIDTFRDLYIQRNAGTIPYFD
                     RVIIETTGIADPAPVLQIILTNPMVFNHFALDGVVTTVDTVNGISSLERFPECVKQAA
                     IADRLIITKVDLAENNQQIKTLEERLRILNPAAPIIATTTEDADPADLFGTGLFDPTS
                     KKVDFENWLQADAYEDRPSMELAGTTLAEPDETALAYYKEYGHKHEDDHSHHHHDPNI
                     NSFVIVRENPIALNTLSMFLEGLTNEAGPDLLRVKGIVHVQERHDQPAVIQGAQQIFH
                     SLDWLNSWPSDDRRTRIVFITRNIDQAYIEDTLVLIERVAERTAAAAGNVA"
BASE COUNT          352 a          399 c          387 g          391 t
ORIGIN      
        1 cggccgaaag atcgcaaatg ataccaaccg cttttacacc cttggcttcc atttccccaa
       61 ccgcttgatc gaggcgatcc tgattgcggg ctgacaaagc gacgttacag ccttcatcgg
      121 caagtgagct ggcaatggca tggccgatgc cctgactgga gcccgtaatc gccgcgtttt
      181 ttcctttaag tcctaaatcc attttagttc ctcctaagta atctctttaa gttgattaat
      241 cccgattatc gacgcgtttg ttaaaggcgc gtacttcgat gctctcccaa atatccgctt
      301 ggaccagagg gtcgtctttt tgaaaggctt cgacagctgc ccggtccggt gcatcgacga
      361 catagaggct gccgacgaca ttctccatcg catcatccat caacgggccg gacataacgt
      421 ttttgatagc acttttttta agatattcaa catgtcccgg catggcggcc gcgcgtttct
      481 cggtcacgcc cggtttatcg atgcaaaaaa ttgtaaacag catttttctc tcccttttaa
      541 actctaggca acattaccgg cagcagcggc ggtccgttca gcaacccgtt caataagcac
      601 aagtgtatcc tcaatatagg cctgatcaat gttgcgggta ataaagacaa tacgcgtgcg
      661 gcgatcatcg ctcggccagc tgttgagcca atcgagcgaa tgaaatatct gctgcgctcc
      721 ttgaataaca gccggttggt cgtggcgctc ttgaacatga acgatgccct tgaccctgag
      781 caaatccggc cccgcctcgt tggtcagacc ttccagaaac atgctcaatg tgtttagcgc
      841 gatggggttc tcgcggacga tgacaaatga gttgatattg gggtcatggt gatgatggct
      901 atgatcgtct tcgtgcttgt ggccgtattc tttgtaatag gccagcgccg tctcatcagg
      961 ttccgccagg gttgtgccgg cgagttccat gctcggccga tcttcgtaag catcagcctg
     1021 cagccagttt tcgaaatcga ctttcttcga ggttggatcg aacaggccgg tgccaaacaa
     1081 atccgcggga tcagcgtctt cggtcgttgt tgcgatgatc ggcgctgccg gattgaggat
     1141 gcgcagccgt tcttccaaag ttttaatctg ctggttgttt tcggcgagat cgactttggt
     1201 gataatcaaa cggtcagcga tggcggcttg tttaacgcat tccggaaaac gttccaatga
     1261 cgaaatgcca ttgaccgtat caacagtcgt caccacgcca tccagggcaa aatgattaaa
     1321 taccatcgga ttggtcaaga taatctggag caccggcgca gggtcggcaa tgcctgtggt
     1381 ctcgatgatt acccggtcaa agtacgggat ggtaccggca ttgcgctgaa tatagagatc
     1441 gcgaaaagtg tcgatcaaat cccctttgac cgaacagcaa agacagccat tggccagctg
     1501 gatgacattt tcgtcggagc gctcaacca
//
LOCUS       DASCNL010000925         4928 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001884915, whole genome shotgun sequence.
ACCESSION   DASCNL010000925 DASCNL010000000
VERSION     DASCNL010000925.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4928)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4928)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4928
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001884915"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="QF359_12120"
     CDS             <1..267
                     /locus_tag="QF359_12120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87700.1"
                     /translation="TAGFFFRKGSRNYMGDEELVAYYKTGRSIFDLNKRKAIYQKAFD
                     RVNTQAYMMPLVPLPVVLAHVKSVVVHGGHKNPEGFELNRLSWK"
     gene            358..1272
                     /locus_tag="QF359_12125"
     CDS             358..1272
                     /locus_tag="QF359_12125"
                     /inference="COORDINATES: protein motif:HMM:NF012363.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO87701.1"
                     /translation="MNKIDTPTHNIPDDIAAEIKAMGKQFNEEIAGDTREIYIPLLEA
                     INRSGIKVTSDISYGPHERNLLDVHVADEEVSEATTVIFFHGGGYVRGHKNIAGEVLH
                     GNVANFFVRNGMIGINATYRLAPEAKWPDGAEDVRAALAWARENITEYGGDPEKIFLL
                     GQSAGANHVSTYVFRKSQHPDNNGPGCAGAILMSGVYGNNPENAAPNQLAYFGEPSEK
                     YLEMATLGNVDYGDTPVMMSNAEFDPIAWECFGIMLLAEIAEKFDKVPRYKQMRGHNH
                     VSQVYSIGTGDNGVGPDIIDFINHTLNN"
     gene            1315..2325
                     /locus_tag="QF359_12130"
     CDS             1315..2325
                     /locus_tag="QF359_12130"
                     /inference="COORDINATES: protein motif:HMM:NF014899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87702.1"
                     /translation="MANIVFGFGTAHGPLLSTPPDKWDLRGDADRQNPAHPFKGEFYT
                     FDELYELRKGENLAEQNTLEVRTERYDRCQNQVAVIKEKLAEVDPDVLLVVGDDQHEW
                     FQDNIQPAFTIYHGDEVANTAFDEEKAKKAPPGIGYVMRANSPDEDIVFKCEPDLADH
                     IIAQVIENEFDVTASATPPIGPKGPLGMGHAFGYIYEKIVSDQPPALVPILINTFFPP
                     NQATSKRCYEFGRTIGRAIKSWNSYKTVAVAASGGLSHFVIDEEFDNRIIEAFNSGDV
                     AALTSEPEKLMQSGTSETKNWIVTAGIIAETELKFNLLDYVPCYRTDAGTGNAMAFST
                     WT"
     gene            2349..2786
                     /locus_tag="QF359_12135"
     CDS             2349..2786
                     /locus_tag="QF359_12135"
                     /inference="COORDINATES: protein motif:HMM:NF024966.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJO87703.1"
                     /translation="MNRDQERAIEWDCAQIVNKFYCSLDARRYDDLVNCFTPDGVWKR
                     QGNELQGRDAIMAAMEERGENLVIRHIVTNVQVTIEDENSASTSEYITIYRHDSDEKL
                     EGPAPLDGPGVIFLYQDKMVRSENGWQMTDKRGRPIMLKKRPK"
     gene            complement(2804..3880)
                     /locus_tag="QF359_12140"
     CDS             complement(2804..3880)
                     /locus_tag="QF359_12140"
                     /inference="COORDINATES: protein motif:HMM:NF014653.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HJO87704.1"
                     /translation="MNITADLLGRQAAEILKSWQMPGKYIGTVVEVMIDTDLRGIDSH
                     GVGMLSGYQMMRGLGRIKMDGDISVVRNLPSMALVDGGHGLGHPVGVFATDLVIEKCA
                     ETGISAVAVRNSNHYGAAGFYARRIVEQGFIGISMTGTPGAGIVPTFGKQAMLGTNPI
                     AFAAPAKRNPPFVLDMATSTVAIGKISIAKRLGMPIPEGWALDENGNPVTDSVAARET
                     RLLTPLGGSREQGSHKGYGLAAMIDILCSTLSGAIIPGVENHQRRELAEGNVGHFFLA
                     IDPEALRDNGEFEDDLDELIDALHETPAVDLDQPVLVAGDPELAVYKDRIANGIPVPD
                     GLFDEIRKVALDSNAPFILDQDDT"
     gene            4088..>4928
                     /locus_tag="QF359_12145"
     CDS             4088..>4928
                     /locus_tag="QF359_12145"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87705.1"
                     /translation="MPGSNSLDAAGVRAKVNHPIVDGDGHVLEANQTILDYVKKIGGP
                     EMALRYENMDHPWKYQDVQPIFWGQPSGPHSLDRATAMLPKLYRERLDEAGIDVGIVY
                     STACLPLMHVRDDEVRQIGHRALNMLLADIFSEVSDRLIPNAVIPMFSPAEALAELDF
                     AVNELGFKAATFGTEVRLAVPEIAKQASELGKYTERVYPVALDALHDYDPVWQRCIDL
                     KIPVGCHTAARGGGGRHSSPSNFVFNHLGGFSTAGDYFCRSIFMDGVTRRFPELNFAF
                     LEGG"
BASE COUNT         1246 a         1168 c         1262 g         1252 t
ORIGIN      
        1 acagcaggct tcttcttccg caaaggctcg cgtaattata tgggtgatga agaactcgtg
       61 gcctactata aaaccggccg ttcgattttt gatctcaata aacgcaaagc catctatcaa
      121 aaggcttttg accgggtgaa tacgcaagct tatatgatgc cgttggtgcc gctgcctgtg
      181 gtgctggctc atgtgaagtc tgttgtcgtt catggcggtc ataaaaaccc cgaaggcttt
      241 gagcttaatc gcctcagctg gaaataagct ttaaaaattc cgtgccgtgt gatcgaatag
      301 gtcgcacggc actttttttg ccaaataata aaaacggcat atcggggaac tgtaattatg
      361 aacaaaatcg acacgccgac acacaacatt ccagacgata tcgcggcaga gatcaaagcc
      421 atgggtaagc aatttaatga agagattgcc ggcgacactc gggaaattta tataccgctt
      481 ctggaggcga taaatcgcag tggcatcaag gttaccagcg atatttctta cggtccccat
      541 gaacgtaatt tactggatgt ccatgtcgcg gatgaagagg tatctgaagc gactacggtc
      601 atcttctttc atggtggcgg ctatgtgcgc ggccacaaga atattgccgg tgaggtgctg
      661 catggcaatg tcgccaattt ttttgtccgc aacggtatga ttggtattaa tgcgacatat
      721 cggctggcgc ctgaggccaa atggcctgac ggtgccgagg atgtcagagc ggcgttagct
      781 tgggcgcggg aaaatatcac cgaatatggt ggtgatcctg agaaaatttt tctactcggt
      841 caatcggctg gtgccaatca cgtctcgact tatgtttttc gtaaatccca gcacccggat
      901 aataacgggc ccggttgcgc cggtgcaatt ttaatgtctg gcgtctatgg caataaccct
      961 gaaaacgcag cccccaatca gttagcctat tttggtgagc cgtctgaaaa atatcttgag
     1021 atggcgacat tgggaaatgt tgattatggt gatacgccgg tgatgatgtc taatgcagaa
     1081 tttgacccta tcgcgtggga gtgtttcggc attatgctgc tcgccgaaat cgcggaaaaa
     1141 tttgataagg tgccgcgtta taaacaaatg cgcggccaca atcatgtctc gcaagtctat
     1201 tccatcggca ctggcgacaa cggcgtcggt ccggacatca tcgattttat caatcacact
     1261 ttaaacaact aggtgaagcc gtaactaaaa ataacaggaa acatggagaa gtaagtggct
     1321 aatatcgtat ttggctttgg tacagctcat gggccgctgt tatcaacccc gccagataaa
     1381 tgggatttgc gcggtgatgc cgaccgacaa aatcccgcgc atccgtttaa aggtgagttt
     1441 tatacttttg acgagctcta tgaattacgc aaaggtgaaa acctcgccga acaaaacacg
     1501 ctggaggtta ggacagaacg ttatgaccgc tgtcaaaatc aagtcgcagt gatcaaagaa
     1561 aaattagccg aagttgaccc cgatgtactg ttggttgttg gtgatgacca gcatgaatgg
     1621 tttcaagata acatccagcc agcctttacc atctatcatg gtgacgaggt cgctaacact
     1681 gcctttgatg aagagaaagc taaaaaagcg ccgcccggaa ttggctatgt tatgcgcgcc
     1741 aacagtcccg acgaagatat tgttttcaag tgtgaaccgg accttgccga tcatattatt
     1801 gcccaagtga ttgagaacga atttgatgtg acggcttccg ctacaccgcc gataggcccc
     1861 aaaggtccgc tcggtatggg acacgccttt ggttatattt atgaaaagat cgtcagtgat
     1921 caaccgccgg cgctggtgcc cattttgatc aatacttttt ttccgcctaa tcaggcgacg
     1981 tccaagcggt gctatgagtt tggccggacg attggccggg cgatcaaatc ttggaacagc
     2041 tataaaactg tggctgttgc ggcatcaggt ggtcttagtc attttgttat cgatgaagaa
     2101 tttgataacc gcatcattga ggcgtttaat tcaggtgatg tggctgcact gacttccgag
     2161 ccagaaaaat tgatgcagtc cggcacgtct gaaacaaaaa actggatcgt tacggcaggc
     2221 attatcgcgg aaaccgaatt gaagtttaat ttgctggatt atgtgccttg ctaccggacc
     2281 gatgcaggca ccggtaatgc aatggcgttt tccacttgga cttaaaataa gaactgggag
     2341 ttttatcaat gaatagagat caggaacgcg caatcgagtg ggattgcgcc caaatcgtta
     2401 acaaatttta ctgttcgctt gatgcgcgcc gctatgacga tctggtgaat tgttttaccc
     2461 ccgatggggt gtggaaacgt caaggcaacg aattgcaggg ccgcgacgca atcatggcgg
     2521 cgatggaaga gcgtggtgag aatctagtaa ttcgtcatat tgtgacgaat gttcaagtga
     2581 cgattgagga cgagaacagc gccagcacgt cagaatatat caccatctat cgccacgatt
     2641 ctgatgaaaa acttgaagga ccggcgccac ttgacgggcc tggggttatt ttcctctatc
     2701 aagacaaaat ggtgcgcagc gaaaatggtt ggcaaatgac cgataaacgg ggccgcccga
     2761 ttatgctgaa aaagcggcct aagtaatttg tgattaatga accttatgtg tcgtcttgat
     2821 ccaatatgaa tggcgcattg ctgtcgaggg caacttttct aatttcatcg aataacccgt
     2881 cgggaacagg gatgccgtta gcgatgcgat ctttatagac cgccaattcc ggatcaccgg
     2941 caactagcac gggctgatcc agatctacgg ctggtgtttc gtgcagtgca tcgatcagct
     3001 catcgagatc atcttcaaac tcgccgttat ccctgagcgc ttcgggatcg atggcgagaa
     3061 aaaaatgtcc gacattacct tcagccagct cgcgcctttg gtggttttcg acgcccggga
     3121 taatggcgcc gctcagcgtg ctgcaaagta tgtcgatcat ggccgccaaa ccataaccct
     3181 tgtggctgcc ctgttcgcgg gaaccaccga gcggcgttag taggcgggtt tcccgtgctg
     3241 caactgaatc ggtgaccgga ttaccatttt catccaaagc ccagccttcc ggaatcggca
     3301 tgcccaggcg tttggcgatt gagattttac caattgccac tgtgctggtc gccatatcga
     3361 gaacaaaggg cgggtttcgt ttagctggtg cggcgaaggc gatgggattg gtgccgagca
     3421 tcgcctgttt gccaaaagtt ggcacaatcc ctgcacccgg cgtaccggtc atggaaatgc
     3481 cgataaatcc ttgctcgaca atgcgccgcg cataaaaacc ggccgcacca taatgattgg
     3541 agtttctcac ggcaacggcg ctgataccgg tctccgcgca tttttcgatt accaaatcgg
     3601 tggcaaaaac accgaccggg tggcctaaac catgcccacc atcaaccagc gccatcgaag
     3661 gcaggtttct gacgacgctt atgtcaccat ccatcttgat gcgccctagt ccgcgcatca
     3721 tttgatagcc ggacaacatg ccaacaccat gtgaatcgat gccacgaaga tcagtgtcga
     3781 tcatcacttc gacgactgtg ccgatatatt tccccggcat ttgccaggat ttgagaattt
     3841 ctgccgcctg ccgcccgagg aggtctgctg ttatgttcat tttattccaa ctttttaaaa
     3901 tcaattaaaa aatagctatt tctacttgat tctattacat tattctaaat atcatgccgc
     3961 tataatgggt gaaatataga acgcactagc aatgagtaaa agccaatttt taaatctgtt
     4021 tgattgcact tttggcccct ttaccgatcc agtcgtgaca gctcgttacc gggaaggaag
     4081 atcataaatg ccaggttcaa atagtcttga tgccgccggt gtgcgggcaa aagtcaacca
     4141 tccaattgtt gatggcgacg gccacgtgct cgaagcaaac cagacaatac tcgattacgt
     4201 caaaaaaatt ggcgggccgg agatggctct gcgttatgaa aatatggatc acccatggaa
     4261 atatcaggat gtgcagccga tattctgggg tcagccctct ggcccccatt cactggaccg
     4321 ggcgacagcg atgctgccga aactgtaccg ggaacggctt gatgaagcgg gtattgatgt
     4381 cggcatagtt tattcaaccg cctgcctgcc cttgatgcat gtacgtgatg atgaagtccg
     4441 ccaaattggt caccgcgctt tgaatatgct gctggctgat attttttcgg aagtcagtga
     4501 tcggcttatc ccaaacgcgg ttataccaat gtttagccct gcagaagcct tggccgagtt
     4561 ggatttcgcg gtcaacgagc tcggcttcaa agcggcgacg tttggtaccg aagttcgtct
     4621 cgctgtaccg gagatcgcca aacaggcatc ggagcttggc aaatatactg aacgggttta
     4681 tccagtggcg ctagatgcct tgcatgatta tgacccggtc tggcagcgct gcattgatct
     4741 taaaatcccg gttggctgtc acacggcggc ccgaggcggc ggcgggcgac attcctcgcc
     4801 ttcaaatttt gtctttaacc atctcggtgg cttttcaacg gcgggcgatt atttctgccg
     4861 ctcaatattt atggatggcg ttactcggcg ttttcccgag cttaattttg ccttcctcga
     4921 aggtggcg
//
LOCUS       DASCNL010000926         2030 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001885595, whole genome shotgun sequence.
ACCESSION   DASCNL010000926 DASCNL010000000
VERSION     DASCNL010000926.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001885595"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            106..1251
                     /locus_tag="QF359_12150"
     CDS             106..1251
                     /locus_tag="QF359_12150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO87706.1"
                     /translation="MQFEIPRTIYAEEHEIFRDSVARFLQEEVLPVYESWEDAGRTPR
                     DIWLRAGEVGLLGTSTPKEYGGIGGDFLFDSIVIEELGRYGVAAPAWDMHAYIIAPIL
                     QNFCTNEQKKAWLPKMVTGEWISAIGLTEPGGGSDMKEIKTNAKADGVDYIINGAKTF
                     ITNGHIADYVLLATKTDPSLGAKGVSMFWVDLSLPGVSRGKNLKKIGNKAQDTAELFF
                     DDVRVPAANLVGELNQGWALLMDGLAQERLVVAVRSIVLAEAAVDQTIEYTKQRKTFG
                     QTVFDFQNTQFKLAEMTADVEAGRPFIDRCIELHAKGECSMYLAAKAKLWATELADRV
                     LDDCLQLHGGYGYVWEFPIARAWADARVHRIYAGTNEVMKYIIAKSL"
     gene            1274..>2030
                     /locus_tag="QF359_12155"
     CDS             1274..>2030
                     /locus_tag="QF359_12155"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HJO87707.1"
                     /translation="MASSTIASIIKQACAEKAEATFIADENQSLNGIELWENIDAAVV
                     HLYELGLSKGDVVAFYCGSSVPHAVTFFACLVSGIIPCCLHVRETPERNRKNIEFIEA
                     KKIFTDLELVEDAQELIDANNVISLSNDLTASEPLASEMLEADDPAVILISSGTTGVP
                     KCIQHSQATLAATAEYGPYSYDCWDQSDSTMIIMAPSFAAWIHTVLPFIFIKGRVLFG
                     AGFDPVNFLSTLEKEKITLAPLVPTVWRMVMAAE"
BASE COUNT          498 a          451 c          565 g          516 t
ORIGIN      
        1 tgtttttcat tttaaccata ctaaaaggta ttgtttaaaa agtttacttg ggttatacca
       61 tactaaatag tatgtacaaa ttaaatttgc ctagggaaga agaaaatgca gtttgaaatt
      121 ccacgcacca tctatgccga agaacatgaa atatttcgcg attccgttgc ccgcttcctg
      181 caggaagaag tgctgccggt ctatgaaagc tgggaagatg ccgggcggac gccccgggat
      241 atctggctgc gcgctggtga agtagggctc ttaggcacta gtacaccgaa ggaatatggt
      301 ggcatcggtg gtgactttct atttgattcc atcgtaatcg aagagctcgg ccgctatggc
      361 gtggcggcac ctgcctggga tatgcacgct tatatcattg caccaatttt gcagaatttc
      421 tgtaccaacg agcagaaaaa agcctggctg ccaaagatgg ttaccggcga gtggatttca
      481 gccattggcc tcactgagcc gggtggcggc agtgatatga aggaaattaa gaccaatgct
      541 aaggctgacg gggttgatta catcatcaat ggcgcaaaaa cttttatcac caatggccac
      601 attgctgatt acgttttgct tgcaaccaaa accgatccat cgctgggggc caaaggcgtt
      661 tcaatgttct gggtggattt atcgctgccg ggtgtcagcc ggggtaaaaa tctcaaaaag
      721 atcggcaata aggcgcagga tacggcagag ttgtttttcg atgacgtccg cgtgccggcg
      781 gccaatttgg tgggtgagct taatcagggc tgggcattgt tgatggatgg tttggcgcag
      841 gaacgtctgg tggtggccgt gcgctccatc gttttggccg aagcggcggt tgatcaaacc
      901 attgaatata ccaagcagcg caaaactttc ggtcaaacgg ttttcgattt tcagaacacc
      961 cagtttaaac tggcggaaat gacggccgat gttgaggctg gacgtccgtt cattgatcgt
     1021 tgcattgagc tccatgccaa aggagagtgt tcgatgtatc tggcggcaaa agcgaaactc
     1081 tgggcaaccg aattggctga ccgggtgctg gatgactgcc tgcaattgca tggcggctat
     1141 ggctatgtct gggaattccc gatcgcacgc gcttgggcgg atgcgcgggt ccatcgaatt
     1201 tacgctggca ccaatgaagt aatgaagtac ataatcgcca aaagtcttta actaattggc
     1261 ggagcattcc accgtggcgt catcgaccat cgcctcaatc atcaagcagg cttgcgccga
     1321 aaaggctgag gcgactttta ttgccgatga aaatcaaagc ctgaatggga tcgaattatg
     1381 ggaaaatatt gacgcggcgg tggtgcatct ttacgaactc ggactttcaa agggcgatgt
     1441 cgtcgctttt tattgtggca gttcggtacc tcatgcggtg accttctttg cctgcttggt
     1501 cagcggtatc ataccctgtt gcctgcatgt gcgagagacg ccggaacgta atcgcaaaaa
     1561 cattgagttc attgaagcca agaaaatatt taccgatctt gagctggtcg aagatgcaca
     1621 agaactgatc gacgctaaca acgtgatttc cctctcaaat gatttaacag caagtgaacc
     1681 actggcgtcc gagatgttag aggccgatga tccggcggtg attttaattt cctccggcac
     1741 gacgggcgtg cccaaatgta tccagcatag ccaagcgaca ttggcggcga ccgccgaata
     1801 tgggccttat agttacgact gctgggacca gagtgacagc accatgatta ttatggcgcc
     1861 gtcctttgct gcttggatcc atacggtgtt gccgtttatt ttcattaagg ggcgggtgtt
     1921 gtttggtgct ggttttgatc cggtgaattt tttgtcgacg ctggaaaaag aaaagatcac
     1981 gctcgcacca ctggtgccga ccgtatggcg gatggtgatg gcggccgagc
//
LOCUS       DASCNL010000927         1747 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001885760, whole genome shotgun sequence.
ACCESSION   DASCNL010000927 DASCNL010000000
VERSION     DASCNL010000927.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001885760"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="QF359_12160"
     CDS             <1..293
                     /locus_tag="QF359_12160"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJO87708.1"
                     /translation="MGGLSGLLSANFEDFVSPDMMSWPVSGELIFMVVLGGMGTIMGP
                     LGGTIIFLLLSEILSNITEAWHLIFGPFLILVVLFARGGVEGFFAKFEKRHD"
     gene            286..1032
                     /locus_tag="QF359_12165"
     CDS             286..1032
                     /locus_tag="QF359_12165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87709.1"
                     /translation="MTDIVLKVENLVKNFGGLIATDALNLEVEQGEIHAVIGPNGAGK
                     TTLIHQLSGMLKPDDGSIHFDGQDIGHLSPANRCHAGMVRSYQITSIFKDFSVLHNVA
                     MSIQAQEGHSFRFWRNADKDVDLAGKAMAILEEIGLQERANVLADNLAHGEQRRLEIA
                     MALATSPKLLLLDEPMAGMGPEESARVTKYLNTMKGRYTMLLIEHDMDAVFALADRIT
                     VLVYGQAVACGTPEEIRNNAGVRQAYLGED"
     gene            1032..1742
                     /locus_tag="QF359_12170"
     CDS             1032..1742
                     /locus_tag="QF359_12170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87710.1"
                     /translation="MAELLRVENIESSYGASQVLFGLSLEVGIGEVVTLLGRNGMGKT
                     TTIRSIMGLLHPHAGEIHLKGQAIQGEPSFKVAQAGLGLVPEGRQIFPNLNVLENLIA
                     TAANRSEITDPWTVERIFNLFPLLAERRSNAGNQLSGGEQQMLAISRALMTNPDLLIL
                     DEATEGLAPLIRDDIWKVLEQLKIAGQSILVIDKNVDVLTRIADRHYIIEKGKVVWSG
                     SSDELKQNEELQHRYLGV"
BASE COUNT          431 a          379 c          477 g          460 t
ORIGIN      
        1 tgatgggtgg tttatccgga ttgttgtcag ctaattttga agattttgtc agtcccgaca
       61 tgatgtcctg gccggtttca ggcgagctga tattcatggt cgtgctgggc ggcatgggca
      121 ccattatggg accattaggc ggcactatta tctttttatt gttgtcggag attctctcca
      181 atatcaccga agcctggcat ttaatatttg gcccattcct tattctcgtc gtgctatttg
      241 cccgcggtgg agttgaaggt ttttttgcaa aatttgagaa acgccatgac tgatattgta
      301 ttaaaagtcg aaaatctggt gaagaatttt ggcggcttga ttgccacaga tgcacttaac
      361 ctagaagtcg agcaaggcga aatacatgcg gtgatcggtc ccaacggtgc cggtaaaaca
      421 acgcttatac atcagctttc cggcatgctc aaaccagatg atggttcaat ccattttgat
      481 gggcaggata ttggccattt atcgccggcc aatcgctgtc acgcgggtat ggtacggtcc
      541 tatcagatca catcgatctt caaagatttt tcggtgctgc acaatgtcgc gatgtctatt
      601 caagctcagg aaggtcacag ttttcgcttc tggcggaatg cagacaagga tgttgatcta
      661 gccggtaagg caatggcgat tttggaagag attggcttgc aggagcgggc caatgttttg
      721 gccgacaatt tggcccatgg tgagcaacgc cgattggaaa tcgcgatggc gctggcaact
      781 tcgccgaaac tactgctgct ggatgagccg atggcgggta tggggccaga agaatcagcg
      841 cgcgtcacca agtatcttaa tacgatgaaa ggccgctata ccatgcttct gattgagcat
      901 gatatggatg cagtatttgc tctggctgac cgcataaccg tgttggttta tggccaggca
      961 gttgcctgtg gcaccccgga agaaattcgc aacaatgctg gagttcgcca agcttatctg
     1021 ggagaagact gatggctgaa ctgctacggg tcgaaaatat tgaaagttct tacggcgctt
     1081 ctcaagttct gtttggcctt tcactggaag tcgggatcgg tgaagtcgtg acgctcctcg
     1141 ggcgcaatgg tatgggaaaa acgacgacca ttcgttccat aatgggcctg ctgcatccgc
     1201 acgccggtga gatacatctt aagggacagg cgatacaagg cgagccatcc tttaaagtcg
     1261 cgcaagctgg actcggactg gtgccggaag gccgtcaaat tttccccaat ctgaacgtgt
     1321 tggagaacct gatagcgacg gcggcaaatc gcagtgaaat tacggatcct tggacggtcg
     1381 agaggatttt taatctgttc ccgctcttgg ctgaacggcg gtccaatgca gggaatcaat
     1441 tgtcgggtgg tgaacagcag atgcttgcaa tttcaagagc cctcatgacc aatcccgatt
     1501 tactgatcct ggatgaagcc accgaaggcc tagcgccgct tatccgagat gatatctgga
     1561 aggtcttaga gcagcttaag atagctggcc agtctatcct ggtgattgat aaaaacgttg
     1621 atgtcctgac gaggatcgct gaccgccact atattattga aaaaggtaaa gttgtgtggt
     1681 caggaagttc agatgaactt aagcaaaatg aagaattgca acaccgatat cttggtgtgt
     1741 aaattta
//
LOCUS       DASCNL010000928         4272 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001887018, whole genome shotgun sequence.
ACCESSION   DASCNL010000928 DASCNL010000000
VERSION     DASCNL010000928.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4272)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4272)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4272
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001887018"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1546
                     /locus_tag="QF359_12175"
     CDS             <1..1546
                     /locus_tag="QF359_12175"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJO87711.1"
                     /translation="EGTVSDELPKVYETVVHMLAAAGENAGDACALSFEGRDLSYSQY
                     LRSVGGFATELVELGVRGGRVALVCGNSLEMAIALFAVHAAGAQAVPINPIYTAREMT
                     HILEDSDPTVVVYDNETAAVVEPLIKELGIVNGILVGGNGGRLLDSWRDDASAKLPEP
                     LPGPDDFATLQYTGGTTGLPKGVNITHGQMSVNLSQREAFLPTRLDNETVICIMPLFH
                     VFASSMCLHLTAYCRGRLVILARYRPDVVLDTIENEKITRLPAGPTIFNGLMDFEGFE
                     TRDFSSLVTAYSGSAPLPVETLKRWEELTGCPILEGYGQSEAGPVLTYVAEGDVLKPG
                     SVGRAIPQTEVQIVDTDTGTKILAPGEQGEIRAHGPQIMSGYRNRPEETAEALRGGWL
                     YTGDIGELDEEGILYIRDRKKDMAIVGGYNVYPREIDEVLFAHPAVLEAAAVGVPDDY
                     RGEVIRALVVVKPGEAVTEESLLVYCQENLAKYKVPAMINIVDDIPKTTIGKIDKKAL
                     RELATS"
     gene            complement(1562..2569)
                     /locus_tag="QF359_12180"
     CDS             complement(1562..2569)
                     /locus_tag="QF359_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87712.1"
                     /translation="MIIDCHGHYTTSPKELQDYRDSQIAGLETHDHSPVLADINVSDD
                     QIRETVEGAQLKLQSERGTDLTIFSPRASGMGHHIGDATISEYWSIACNDMIKRVVDL
                     YPNNFIGVCQLPQSPGVTPDNCIPELERCINELGFIGCNVNPDPTGGYWTDPPLFDEW
                     WYPLWEKMEELNVPGMIHVSASCNPNFHFTGAHYMNADTSAFMQFITSDLFKDFPKLK
                     FIIPHGGGAVPYHWGRYRGLAQDMGRPPLDELLLDNIFFDTCVYHQAGIDLLTKVIPT
                     KNILFASEMVGAVRGIDPETGFNYDDTKRYVDAIDWLDAGEKKQIFENNVRSVFPRLA
                     Q"
     gene            complement(2577..3617)
                     /locus_tag="QF359_12185"
     CDS             complement(2577..3617)
                     /locus_tag="QF359_12185"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJO87713.1"
                     /translation="MKFGIFDHVDRSDLVLSELLDKRLEYVKAVEAVGFYSYHVAEHH
                     ATPLNLVPVPGVYLGAVANATSTIRLGPLVYLLPLYSPLRLIEEISILDHLSHGRFDI
                     GVGRGVSPFELNFHKVDPASSVEIFLDALEAVKYGLTHEILDHDGKHFQYQNVPMELR
                     PLQEPHPPIWYPSSNPDVAPIIGEGGYNFVTLGGMETAKRSIDNYKEAYAKRSGPFGP
                     ALDFPGGTAIGISRHIVVGETMEEAMRIAEPAYSRWHTSLMKLWVDNQVEGPSFARSI
                     LKDVQSAIEIGTDIVGNPESVAAEIERQVEELGVNYMICQFYFGNMAHKDAMRSLELF
                     STEIMQKVSAIG"
     gene            complement(3646..4164)
                     /locus_tag="QF359_12190"
     CDS             complement(3646..4164)
                     /locus_tag="QF359_12190"
                     /inference="COORDINATES: protein motif:HMM:NF019498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO87714.1"
                     /translation="MGIRRVVAGHDENGKAVILSDGDAANVHQPTSTIESTLLWVTDS
                     APASNEGTTDTADQEIGIPPPPNGSIFRVVEFAPEGKDGASEELEYLAKVGTEQHDDA
                     RHPGMHITHSVDYAIIMSGEIDMLVDEDEVHLKTGDVVVQRGNNHAWVNRGTEPCRIA
                     FILIDAHPVAGA"
BASE COUNT         1036 a         1064 c         1129 g         1043 t
ORIGIN      
        1 agagggcacg gtgtccgacg agctgccaaa agtttatgaa accgttgtgc atatgctggc
       61 cgcggctgga gagaatgctg gtgacgcttg tgctctgagt tttgaggggc gggatttaag
      121 ctatagccaa tacctccgct cggttggcgg ttttgccacc gaactggtcg agcttggcgt
      181 taggggcgga cgggtagccc tggtgtgcgg taattccctg gaaatggcga ttgccttgtt
      241 cgctgtccat gccgccggcg cgcaagcagt gccgatcaac ccgatctata ccgcccggga
      301 aatgacccat attctggaag attccgatcc gacagtggtc gtctatgata atgaaaccgc
      361 ggcggtcgtc gagcctttga ttaaggagct cggtattgtc aatggaatat tggttggtgg
      421 caacggtggc cgtttactag atagctggcg ggatgatgct tcagccaagc tcccggagcc
      481 attgcccggc ccggacgatt ttgccacgct tcagtatact ggcggcacca caggtctgcc
      541 caaaggcgtc aatattacgc acggccaaat gtcggtgaac cttagtcagc gcgaagcttt
      601 tctgccgacc cggctcgaca atgagacggt gatctgcatc atgccactgt ttcatgtgtt
      661 tgccagttcg atgtgcctgc atttgacggc ctattgccgg gggcgattgg tgatattggc
      721 gcgttaccgg cctgatgtgg tgctggatac cattgagaat gaaaaaatca cccgcctgcc
      781 ggccgggccg acgatcttca acggcttgat ggattttgag ggcttcgaga cgcgggactt
      841 ttcatcccta gtgacggctt attccggctc ggcgccattg ccggtggaaa ccctaaaacg
      901 ctgggaggaa ttaaccggct gtccgatact cgaaggctat ggtcaaagtg aggcgggacc
      961 ggtgcttacc tatgttgcgg agggtgatgt gttaaaaccg ggttcagtcg gcagagcaat
     1021 cccgcaaacg gaagttcaaa ttgttgatac cgataccggc accaagattt tagcgccagg
     1081 tgagcaaggt gaaatacgcg cgcacggacc tcagatcatg tccggttatc gcaaccggcc
     1141 agaagaaaca gccgaagctt tgcgtggcgg ctggctctat accggtgata ttggcgagct
     1201 agacgaggag gggattctct atatccgtga ccgcaaaaaa gacatggcga tagttggcgg
     1261 ctacaacgtt tacccgcgtg aaattgatga agtgttgttt gcccatccgg cagtactgga
     1321 agccgctgcc gtcggtgtac cggatgatta ccggggtgag gtgatccgag ccctagtggt
     1381 ggttaagccg ggtgaggccg tgaccgaaga gtcattgctc gtctattgcc aggaaaatct
     1441 ggctaaatat aaagtaccgg cgatgatcaa catcgttgac gacatcccca aaacaacgat
     1501 cggcaaaatc gacaagaagg ctttgcggga acttgctacg agctaattga agattggcaa
     1561 attactgtgc cagacgcggg aagacgctgc ggacattatt ctcaaaaatt tgtttctttt
     1621 ctcccgcatc cagccagtca atcgcatcga catagcgttt ggtgtcatca taattaaatc
     1681 cggtctcggg atcgataccg cgcaccgcgc caaccatctc tgaggcgaac aaaatatttt
     1741 tagtcggaat aactttggtc agcagatcaa taccagcctg atgatagacg caggtatcaa
     1801 aaaaaatatt atcgagcagc agctcgtcta aaggcgggcg gcccatatcc tgggccagtc
     1861 cccggtagcg accccaatga tacggcactg cgccaccgcc atggggaatg ataaatttta
     1921 gcttggggaa atccttaaac aaatcagatg ttataaactg cataaaggcc gaggtgtcgg
     1981 cgttcatgta atgcgcgccg gtaaagtgaa agttgggatt gcaggaggca ctgacatgga
     2041 tcatgccggg tacattaagt tcttccattt tctcccaaag tggataccac cactcatcaa
     2101 acagaggcgg gtcggtccaa tacccacccg tggggtccgg attgacattg cagccgataa
     2161 aaccgagctc gttaatgcag cgttccaatt cagggatgca attgtcaggt gtcacacccg
     2221 gtgattgcgg caattgacag acgccgataa agttattggg atagagatca accacgcgtt
     2281 tgatcatatc attgcaggcg atcgaccaat attcgctgat cgtggcatca ccaatatgat
     2341 gccccatacc ggaggcgcgc ggtgaaaaaa ttgtcagatc agtgccgcgc tcgctttgca
     2401 gtttaagctg ggcgccttcg acggtttcgc gaatctgatc atcagagaca ttgatatcgg
     2461 ccagcaccgg cgaatggtcg tgcgtttcca acccggcaat ctgactatct cgataatcct
     2521 gcaactcctt cggggaggtc gtgtagtggc catgacaatc aataatcata atgatttcat
     2581 cctatcgctg atactttctg cataatttca gtgctaaaca attccagtga gcgcatcgca
     2641 tctttgtgag ccatattgcc gaagtagaat tggcaaatca tgtagttaac ccctaattct
     2701 tcgacctgcc gttcaatctc agccgcaacg gattcagggt taccgacaat atcggtgcca
     2761 atctcgattg ccgattggac gtcctttagg atgctacggg caaaagacgg gccttcgact
     2821 tgattgtcga cccataattt catcaggctg gtgtgccagc gggaataggc cggctcggct
     2881 attctcattg cttcttccat ggtttcacca accacgatat gacggctgat accaatggcc
     2941 gtaccgccag ggaagtcgag ggccggcccg aacgggccgc tgcgtttggc atatgcttct
     3001 ttgtaattat caatcgatct tttggcagtt tccataccgc ctaacgttac aaaattataa
     3061 ccaccctcac caatgatcgg cgccacatcg gggtttgacg aagggtacca gattggcgga
     3121 tgaggttctt gcagagggcg caattccatt ggcacattct ggtattggaa atgtttgccg
     3181 tcatggtcta ggatctcgtg ggtcaaacca tatttgacgg cttccagagc atccaaaaat
     3241 atctctactg aagaagcggg gtcgactttg tgaaaattca gctcaaatgg tgatacgccg
     3301 cggccaacac caatatcaaa gcgaccatga gataagtgat ccaagatcga tatttcttcg
     3361 atcaaacgta gcggcgaata aagcggcaat agataaacca gcgggcctag ccgaatggtc
     3421 gaggtggcat tcgccacagc gcccaaataa acccctggaa ccggtactaa attcaatggt
     3481 gtcgcgtggt gttcggcgac gtggtagctg tagaaaccga ctgcctctac agcctttacg
     3541 tattccagtc ttttgtccaa taactcgctg agtactaaat cagaccggtc gacatgatca
     3601 aatatgccaa acttcatcgg cttaaactcc cgtgttcaaa taaaatcatg cacctgcaac
     3661 tggatgggca tctatgagta taaaggctat ccgacacggc tcggtccccc ggttgaccca
     3721 ggcatgattg ttgccgcgct gaacgacgac atctccagtt ttgagatgga cttcatcttc
     3781 gtcaaccagc atatcgattt cgccactcat gataatcgca tagtcgaccg aatgggttat
     3841 atgcatgccg ggatggcggg cgtcatcatg ctgctctgtg ccgaccttgg ccagatattc
     3901 aagttcctcg gacgccccgt ctttgccctc cggggcaaat tcgaccaccc tgaaaattga
     3961 gccattgggg ggtggtggaa taccgatttc ctgatcggct gtgtctgtag tgccttcatt
     4021 actggctggc gcgctatcgg tcacccacaa cagagtggat tcaatagtgc tggttggctg
     4081 gtggacatta gcggcgtcgc catctgataa gataactgct ttgccatttt catcatgtcc
     4141 ggcaactact cggcgaattc ccataatttt tgtcctcctg tttagctgtc agttctcaga
     4201 attttataat aagcggcgtc cgctcaagca aaatgaccgt tgaaaatcat gttttctact
     4261 ctgaaaatta cg
//
LOCUS       DASCNL010000929         2381 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001895547, whole genome shotgun sequence.
ACCESSION   DASCNL010000929 DASCNL010000000
VERSION     DASCNL010000929.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001895547"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1825)
                     /gene="rpsA"
                     /locus_tag="QF359_12195"
     CDS             complement(<1..1825)
                     /gene="rpsA"
                     /locus_tag="QF359_12195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HJO87715.1"
                     /translation="MADVETNQEELPTLTNENFADLLEESFKEEDRLQGRVVNGTILS
                     IENDIVVIDVGLKSEGAVSIKEFTEPGGEVNISASDKIDVFVERYEGRDGTVILSRDK
                     ARREEAWTVLEKAFEAEERVNGVIFGRVKGGFTVDLSGAVAFLPGSQVDIRPIRDINP
                     LMGNPQPFQILKMDRNRGNIVVSRRAVLEETRAEERTELISNLSEGQVLEGVVKNITD
                     YGAFVELEAGVDGLLHVTDIAWKRINHPSEALQVGETVKVQVIRFNAENQRISLGMKQ
                     LESDPWEGAETKYPVETKFNGRVTNITDYGAFVELEAGIEGLVHVSEMSWTKKNVHPG
                     KIVSTSQEVEVMVLDVDPSKRRISLGLKQCTVNPWIDFTEKYKTADELEGEIKNITEF
                     GLFVGLTEEIDGMVHMSDLGWVKSGEDAIADYTKGHTIKVKILDIDIEKERISLGVKQ
                     LTDDPVASGIDKLKKGDIVTCKITTVVDNGIEVTVNDDVPGFIRRGDLSRDRSEQRPD
                     RFAAGELVDALVTSVDKGSRKVNLSIKAREVREEKIAMAEFGSSDSGASLGDILGAAL
                     KERSSADEEAAPEEAPKEEAAPEEAPAEEAAPEEAPKEEAAP"
     gene            complement(1989..>2381)
                     /locus_tag="QF359_12200"
     CDS             complement(1989..>2381)
                     /locus_tag="QF359_12200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HJO87716.1"
                     /translation="ASQVAAIPAVRDILLKFQRNFAANPPNDKIGAVLDGRDIGTVVC
                     PDASYKLFILASPEVRAERRYKELQERGEEAIRSAILRDIIDRDERDRSRTVAPLEPA
                     TDAEVIDTSDMDADAVYAAALNYISSRT"
BASE COUNT          548 a          627 c          579 g          627 t
ORIGIN      
        1 caggagccgc ttcttctttc ggagcttcct caggagcagc ctcttcagct ggagcctctt
       61 caggagccgc ttcttctttc ggagcttcct caggagcagc ctcttcgtca gcagaactgc
      121 gttctttcaa tgccgcgccc agaatatcac caagtgaggc gcccgaatca gatgagccga
      181 attcagccat agcgattttt tcttcccgaa cttcgcgggc cttaatcgac aagttaacct
      241 tgcgagaacc cttgtcgacc gaagtcacca aggcatcaac gagttcacca gcagcaaaac
      301 ggtccgggcg ctgctccgag cgatcacgcg acaaatctcc gcgccggata aagccgggaa
      361 catcatcatt aaccgtaact tcgataccat tatcaacaac ggtggtgatt ttacaggtaa
      421 cgatgtcgcc tttttttagt ttatcgatac cgctggcaac tggatcatcg gttagctgtt
      481 taacgcctaa gctgatgcgc tctttctcaa tatcaatatc aaggattttg actttgatgg
      541 tgtggccttt ggtgtaatca gcgatggcgt cttcaccgga tttaacccaa ccgagatcgg
      601 acatgtgaac catgccgtcg atttcctcgg tcaggccgac aaacaggcca aattcggtga
      661 tgtttttaat ctcgccctca agctcatcag cggttttgta tttttcggta aagtcgatcc
      721 acggattgac ggtgcattgt ttgaggccaa ggctgatccg gcgtttggag ggatcaacat
      781 ccagcaccat aacttctact tcctggctgg ttgagacgat tttgccagga tgaacatttt
      841 tcttggtcca gctcatttca gaaacatgga ccaaaccttc gatgccggct tccaattcaa
      901 caaaggcgcc gtaatcggtg atgttggtaa cccggccatt gaacttggtt tcgaccgggt
      961 atttggtttc agcaccttcc cacggatcgg attcaagctg tttcataccc agcgaaatgc
     1021 gctggttttc ggcattgaag cggatcacct gaaccttgac agtctcgccg acttgcaggg
     1081 cttcggaggg gtggttgatg cgtttccagg caatatcggt aacgtgcagc aagccgtcga
     1141 cgccagcttc taattcaaca aaggcaccat aatcggtgat atttttcacc acgccttcga
     1201 gcacttgacc ttcgctcaag ttagagatca gctcggtgcg ttcttctgcg cgggtttctt
     1261 ccagcacggc gcggcgggaa acgactatat taccgcggtt gcggtccatc ttaagtattt
     1321 ggaacggttg cgggttgccc atcagcggat taatatcacg gattggccgg atatcgacct
     1381 gacttccggg taggaaggcg actgcgcccg agagatcgac ggtaaagcca cctttgacgc
     1441 ggccaaaaat aacgccattg acccgttctt cggcttcaaa agctttttcc aatacggtcc
     1501 aggcttcttc gcggcgcgct ttgtcacggc tcagtattac cgtgccgtca cggccctcat
     1561 agcgttcgac aaaaacgtca attttatcgc tggcgctaat atttacctcg ccgccgggtt
     1621 cggtaaattc tttgattgaa acagcaccct cggatttcaa accgacatcg ataacaacga
     1681 tatcattttc gatcgacagg atggtgccgt tgacgacgcg accttggagg cggtcttcct
     1741 ctttgaaaga ttcctctaaa agatcggcaa aattttcatt tgttaaggtg ggtagttctt
     1801 cttggttggt ttctacatca gccatttctg gtattcctca tattatattt tgatttcagg
     1861 ccggctggtt ggttccagcg gtcttgatca caacaaatcc acgggctcca atttcagagt
     1921 accgtggggt taaaacatca aaaccacatg acctgccaag gcagtaaaca tccagttctg
     1981 tgatggtatt acgttcgaga agatatatag ttcagcgctg cagcatatac cgcgtccgcg
     2041 tccatatcac tggtatcaat aacctcagcg tctgtggccg gctccagggg cgctaccgtt
     2101 cttgagcgat cccgctcatc ccggtcaatt atatccctca gaatggcgct acgtatagct
     2161 tcctcgccac gctcttgcaa ctctttataa cgcctttctg cgcgcacttc gggagaggct
     2221 aaaatgaaca atttatagga ggcgtcggga cagacaacgg taccgatatc gcggccatcc
     2281 aaaacggcac caattttgtc atttggcggg ttggcggcaa aattacgctg gaattttaag
     2341 aggatatcgc gaaccgccgg aatggcggca acctgggagg c
//
LOCUS       DASCNL010000930         2576 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001900025, whole genome shotgun sequence.
ACCESSION   DASCNL010000930 DASCNL010000000
VERSION     DASCNL010000930.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001900025"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1150
                     /locus_tag="QF359_12205"
     CDS             <1..1150
                     /locus_tag="QF359_12205"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HJO87717.1"
                     /translation="SRSLITDLKPVAGALVADPGARKVFLQPNGQVIGEGNFIRQINL
                     AGTLSNLRTKGPADFYQGKFARLLVEGVRHAGGSLSLEDLRAFKPQWKKPITKKIGRF
                     HQVHFMPPPASGGLVSAQMFGMLDDGDLFDDASAEEKYHVLAETALRSYGDRETWLRD
                     DFSIVHPTEALVSDQHLENLISNYRTNRHLSPRAFQPTPKQRAENASATSFVVVDREG
                     SAVVCTFTMNNNFGTGRMARGTGIILAAAPTSRGKGPTALGPVMMHNKNSNTLFFVGA
                     AAGGIAAPTALMNVFARSVLANEKLDLAMTASRIHHGGAPDITFHEPNLPKSVTAYLR
                     ERGHLVAVTPVLGLVNAVSCPGGLPRDPGSCAIMTDPRGNGLATSASE"
     gene            1154..2305
                     /locus_tag="QF359_12210"
     CDS             1154..2305
                     /locus_tag="QF359_12210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJO87718.1"
                     /translation="MTLKIAERGVIPPFIVMDVMRAANKRAASGKNVLHLEVGQPSTS
                     APRAVIEAAKQVLETDLLGYTDALGVPPLRERLASYYQEYYGITVPMDRIAITTGSSG
                     AFMLSFLVTFDHGDKVGLASPSYPAYKNILRALGVETIDIPVGPDTAFQPTVEILANL
                     DVKLDGLIVASPSNPTGSMLSAEALEEIVQWCDANGVRLISDEIYHGITYDGKASTAL
                     SYGDNAIIINSFSKYFSMTGWRLGWMIVPENIIRAAECLAQNLYISPPTLSQLATISV
                     FECFKELDANVVRYTENRALLLKELPKAGLDQLAPSDGAFYVYADVTRFTNDSQAFCQ
                     KVLAETGVAITPGIDFDTKRGSQFVRFSFAGATDDMAAATERLGDYLAK"
     gene            complement(2308..>2576)
                     /locus_tag="QF359_12215"
     CDS             complement(2308..>2576)
                     /locus_tag="QF359_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87719.1"
                     /translation="ASKGDDKSDSKSKSKVSSEPASPEPEAEESKEAVTEPAAKPDSE
                     HPDAAEQAEPDEPSYNPNVTVVGDTSSDEGGNNRGGWWDKIVGS"
BASE COUNT          584 a          634 c          682 g          676 t
ORIGIN      
        1 atcacgctct ttgataactg atttaaagcc agttgccgga gctctggttg ccgatcctgg
       61 agcccgtaaa gtgtttctcc agccgaatgg tcaagttatt ggagaaggca acttcatacg
      121 gcaaattaat ttagccggaa cgttgtctaa tttgcgtacc aaaggaccag ccgattttta
      181 tcaaggaaaa ttcgcccgcc tgctggttga aggcgtgcgc catgcgggtg gctcattatc
      241 gctcgaggat ttgcgcgcct ttaaaccgca atggaaaaag ccaatcacaa aaaaaatcgg
      301 caggtttcat caagtgcatt ttatgccgcc accggcttcc ggtggattgg tctcagcaca
      361 gatgttcggc atgttggatg atggtgactt gttcgacgat gcatcggcgg aagaaaaata
      421 tcatgtctta gctgaaacag ctctgcgttc atacggtgac cgagagacgt ggttgcgaga
      481 tgatttttcc attgtccatc ctacggaagc gctcgtttca gaccagcatt tggaaaattt
      541 aatcagtaat taccggacca accgtcacct ctctccgcgg gctttccagc caacgccaaa
      601 gcaacgtgcc gagaatgcgt cggcaaccag ctttgtcgtc gttgatcgtg aaggctcggc
      661 ggttgtctgc acctttacca tgaataataa ttttggcact ggccgcatgg cacgggggac
      721 agggatcata ttagcggcgg caccgaccag tcgtggcaaa ggtccaacgg cgctggggcc
      781 ggtaatgatg cacaataaaa attccaatac cttatttttc gttggcgcag ccgccggtgg
      841 tattgccgcc ccgacggcgc tcatgaacgt atttgcccgc tccgtattag cgaacgaaaa
      901 gctcgatctg gcgatgacag caagccgcat tcatcatggt ggggcaccgg atattacctt
      961 ccatgagcca aatttgccaa aatccgttac tgcctatctc cgggaacgcg gtcatctggt
     1021 tgccgtgacg ccggttctgg gtttagtcaa cgcggtgtct tgtccgggcg gtttaccgcg
     1081 cgatccggga agttgcgcga tcatgacaga tccccgtggt aacgggttgg ctaccagtgc
     1141 gagcgaataa gaaatgacgt taaagattgc cgagcggggt gttattccgc cgtttattgt
     1201 gatggatgtg atgcgtgcgg ccaataagcg ggcggccagt ggcaagaatg tccttcatct
     1261 agaagtcgga caacccagca cttcggcacc tcgggcggtg atcgaggcgg caaagcaggt
     1321 gctggagacg gatttgctcg gctataccga tgctcttggt gtgccgccac tgcgcgagcg
     1381 tctggcgtcc tactatcagg agtactatgg gatcaccgtg ccgatggacc gtatcgccat
     1441 tacgaccggg tcatcaggcg cattcatgct gtcttttttg gtaacgtttg atcacggtga
     1501 taaagtcggt ctcgccagtc caagctatcc ggcttataaa aatatcctgc gcgctcttgg
     1561 cgtcgagacc atagatatcc cggttgggcc tgatacggct tttcagccga cggtggaaat
     1621 tctagctaat ttggacgtta aacttgatgg cttgattgtt gccagcccgt ctaatccaac
     1681 cggcagtatg ctgtcagctg aagcgcttga agaaattgtt caatggtgcg acgccaatgg
     1741 cgtgcgcctg atatctgatg aaatatacca tggtattact tatgacggga aagcgagcac
     1801 ggcattgtcc tacggcgata acgcgatcat catcaacagc ttttcaaaat atttttcaat
     1861 gaccggttgg cgcttgggtt ggatgatcgt gccggaaaat ataatccggg ctgctgaatg
     1921 cctggcgcaa aatttatata tttcgccacc gactttgtct cagttggcga ccatttcggt
     1981 atttgaatgc ttcaaggaat tagatgccaa tgtggtacgc tacaccgaga atagagcgtt
     2041 gctgttgaaa gaattgccaa aagctggcct cgatcaattg gcaccatcgg atggcgcttt
     2101 ttacgtttat gccgatgtga cacgattcac caatgacagt caggcgtttt gccaaaaagt
     2161 actggccgaa accggggtag ccatcacgcc cggtatcgat tttgatacca agcgcggctc
     2221 acaatttgta agattttcat tcgctggagc aactgacgat atggctgctg ccactgaacg
     2281 tcttggtgat tatttagcta aataatatca gctgccgact attttgtccc accagccgcc
     2341 tcgattatta ccgccttcat cgctactcgt atcgccgacc acggtcacat tcggattata
     2401 tgatggctcg tcaggttccg cttgctctgc tgcatcaggg tgctcggaat ctggtttagc
     2461 agccggttcg gtaactgctt cttttgactc ttctgcttcg ggttctggcg atgcaggttc
     2521 tgacgatact ttcgatttac ttttactgtc cgacttatcg tcgcctttag atgcgg
//
LOCUS       DASCNL010000931         3213 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001900452, whole genome shotgun sequence.
ACCESSION   DASCNL010000931 DASCNL010000000
VERSION     DASCNL010000931.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3213)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3213)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3213
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001900452"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1685)
                     /gene="recN"
                     /locus_tag="QF359_12220"
     CDS             complement(<1..1685)
                     /gene="recN"
                     /locus_tag="QF359_12220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HJO87720.1"
                     /translation="MLRTLSIRNVVLIERLDLGFAGGLGVLTGETGSGKSILLDALGL
                     AIGMRADSDLIHQGADQSSVAAEFEITDNNEIDALLDEYGIEGGSNLVLRRLLSIDGR
                     SRAFINDQPVSVALLRQIGEKLIEVHGQLETHGLLDPASHRCFVDAFGGYEDLLARVD
                     DDFQSWRSAATAYEKSMINVEKAKRDEEFLRHAVDELQALDLQPGEEEELAGKRSILM
                     NAEQLIESLQDAFSDLNDDNGVESTLRSALQKVERVADKAGGQFDVAVASLERALLEA
                     TEGIAELLRVSRVMELDPAELEHIEERLFAMRGLARKYNIEVEALPELLKDMQEQLAV
                     LTDGAGNLDQLAKQAEVAKSEYVAAAEKLSAVRKKVSDKLDKAVTKELPPLKLEAASF
                     KTRLDPLDEPDWNEFGREYVSFEVKTNPNTVAGPIHKVASGGELARIMLALKVVLADA
                     DAVPTLIFDEVDVGIGGAVAAAVGERLARLAEDVQVLVVTHSPQVAARGNSHWQISKT
                     GKADGNVTEVGELTGDVRTEEIARMLSGAKITEEARAAAQSLLGAAERVEAAQ"
     gene            complement(1728..2498)
                     /locus_tag="QF359_12225"
     CDS             complement(1728..2498)
                     /locus_tag="QF359_12225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HJO87721.1"
                     /translation="MIIVVTVMLAACAAEEDAYKEDTVERLYNKAMAQLEGNEYKSAA
                     ADFAEVDRQHPYSVWATKAQLMTAYSHYQNNDYDDAIIALDRFIQIHPSNRDVPYAYY
                     LKSLSYYEQISDVGRDQKITKLALKSLNEIITRFPNSKYSRDATLKIDLTRDHLAGKE
                     MEIGRYYENQGQFLGAINRYKKVVDQYQTTTHVPEALHRLTESYLSLGLVNEAKKTAA
                     VLGHNFPGSEWYIDSYKIVEGKSVRFKFKASRWYWPFD"
     gene            complement(2700..>3213)
                     /locus_tag="QF359_12230"
     CDS             complement(2700..>3213)
                     /locus_tag="QF359_12230"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HJO87722.1"
                     /translation="DKMAELVPRDTFSVGFEIDFDCEIVAKQSITVTMINGTFKKEIA
                     RARTFGFMHEVEQLQAAGLGLGGSLDNAVIVEDDKVLNEDGLRYDDEFVRHKVLDAVG
                     DLYLSGGMIMGSFKGVRSGHTLTNQLLRALFADQSTWRYVDFDDRDSQAEPNLAAKSA
                     EVVNLATATA"
BASE COUNT          838 a          847 c          700 g          828 t
ORIGIN      
        1 cattgggctg cctcaacgcg ctcagctgcc cccagcaaac tttgagctgc cgcccgtgcc
       61 tcttcggtga ttttggcacc tgagagcata cgggcaatct cttcggtgcg gacgtcgccg
      121 gtaagctcac caacttcggt gacattgcca tctgccttac cagttttgct aatctgccaa
      181 tgactgttac cgcgcgccgc cacttgcggt gaatgggtaa cgaccagcac ttgaacgtct
      241 tcggcgagcc gcgccaagcg ctcaccaaca gccgcggcaa ccgcaccacc gataccgaca
      301 tcaacctcat caaaaatcaa ggtcggtaca gcatcagcat ctgccaacac tactttcagc
      361 gccagcatga tccgcgccaa ttcacctccg gaggccactt tgtgaatcgg acccgccacc
      421 gtattgggat tggttttaac ttcaaaggag acgtactcac ggccaaattc gttccaatcc
      481 ggttcatcca agggatcaag ccgggtctta aaactggctg cttccagctt caatggcggc
      541 aattccttgg ttaccgcttt atcgagttta tcagagactt ttttgcgcac cgccgacagt
      601 ttttcagccg ctgcaacata ctcagacttt gccacctctg cctgtttggc caattgatcg
      661 agattgccgg ccccatcagt taatacggca agttgttcct gcatatcttt caaaagttca
      721 ggtaaagcct caacttcaat attgtacttg cgggccagcc cgcgcatggc aaataagcgc
      781 tcttcgatgt gctccaattc cgctggatca agctccatca ctctagatac ccgcagcaat
      841 tcagctatac cttcagttgc ctcaaggagg gcgcgttcaa gtgatgcaac ggctacatcg
      901 aactgaccac cggctttgtc tgccacccgc tcgacttttt gcaacgcaga gcgcagggtg
      961 ctttcaacac cattatcatc gtttaaatca ctaaaggcgt cctgcaggct ttcaattaac
     1021 tgctcagcat tcatcaagat gctacgctta ccggcaagtt cttcttcttc gcccggttgc
     1081 aggtcaagag cctgtaattc gtcaacggcg tggcggagaa attcttcatc tcgtttggcc
     1141 ttttcgacat taatcatgga tttttcataa gctgttgccg cactacgcca gctttgaaaa
     1201 tcatcatcaa cgcgggctag taaatcttca tagccgccaa atgcgtcgac aaagcagcga
     1261 tgacttgccg ggtcgagcaa cccgtgggtt tccaattggc catggacttc aattaatttt
     1321 tcaccaattt ggcgcaacaa ggcgacactt accggctgat cattaatgaa ggcgcgtgag
     1381 cggccatcga ttgacaacaa gcggcgcagc actaagttac tgccgccttc gataccatat
     1441 tcgtcgagca gagcatctat ctcattgttg tctgtaattt caaactccgc cgctacagaa
     1501 ctctgatcag cgccttggtg gataaggtcg ctatcagcgc gcatgccgat cgccaaacct
     1561 agcgcatcca ataaaatcga tttgcctgat ccggtttctc cggtgagcac accaaggcca
     1621 ccagcgaatc ctaaatccaa gcgctcaatc aatacgacat tgcggatgga tagagtgcga
     1681 agcatgggtg gcgtaaattc cgtatcgaga aaaggggtta acaaatacta atcaaagggc
     1741 caataccatc ggctagcttt gaacttgaac cgaaccgatt taccttcaac aattttgtac
     1801 gaatcgatat accattcgct gccgggaaaa ttatggccca aaaccgcagc cgttttctta
     1861 gcctcattaa caagcccaag agacaaatag gattcggtca atcgatgcaa agcttccggc
     1921 acatgggttg ttgtctggta ttgatcgacg acttttttgt agcgattaat agcccctaaa
     1981 aactgtccct gattttcata atagcgacca atttccattt ctttaccggc cagatggtcg
     2041 cgggtgagat caattttcag cgtggcatcc cgggaatatt tactgttggg aaaacgggtg
     2101 atgatttcat tgagtgattt caatgctaat ttggttattt tctgatcccg gccaacatct
     2161 gatatctgct cataatagga caacgatttc aaataatagg cgtagggcac gtcacgattc
     2221 gatggatgga tttgaataaa ccggtcgagg gcaataatcg catcgtcata atcattgttc
     2281 tggtagtggc tataggcggt cataagttgc gctttggttg cccaaaccga atagggatgc
     2341 tgacggtcga cctcggcaaa atccgccgca gcacttttat actcgttccc ttccaactga
     2401 gccatcgcct tattatacaa gcgttcaaca gtgtcttctt tgtaggcgtc ctcctccgca
     2461 gcacaggcgg caagcatcac ggtcacaaca attatcatca acacttgaac tggtcgtatt
     2521 ttacgatcca taaaattgtt atccaaaaat tccgcagcca tacaagtggc ttcaaacagg
     2581 cttgaatata tcattttcca ccaatttgtc tgcccaaatc gagcgagtaa tctccaaaag
     2641 atgtaaaaaa accggctcta ttaaaaaacc ggttttaaat caaactattt gtaaattttt
     2701 taagcggttg cagtggccaa attgacaact tctgcagatt ttgcggcaag attaggttct
     2761 gcctgcgaat cacggtcatc aaagtcaacg tagcgccagg ttgactgatc agcaaaaagt
     2821 gcgcgtagca gctgattggt taaagtatgc cccgaccgaa cgcctttaaa gctgcccatt
     2881 atcatgccgc cggacaaata cagatcacca acagcatcaa gtactttatg gcgaacaaat
     2941 tcgtcgtcat aacgcaaacc atcttcattg agaactttat catcctcgac aataacagca
     3001 ttatctaggg atccgccaag gcctaagcca gcagcttgga gttgctcaac ttcgtgcata
     3061 aagccaaagg tacgagcgcg ggcaatttct tttttgaagg tgccattaat catggtaacg
     3121 gtgatcgact gcttggcgac aatttcacag tcgaaatcga tctcgaaacc tacagagaat
     3181 gtatctctgg gtacaagttc agccattttg tcg
//
LOCUS       DASCNL010000932         2516 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001903833, whole genome shotgun sequence.
ACCESSION   DASCNL010000932 DASCNL010000000
VERSION     DASCNL010000932.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001903833"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..644
                     /locus_tag="QF359_12235"
     CDS             <1..644
                     /locus_tag="QF359_12235"
                     /inference="COORDINATES: protein motif:HMM:NF014667.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HJO87723.1"
                     /translation="RAIGDGTNTKSSYVMRRLTVLLAFLTAIIMNLGVDAHGPNQKNK
                     ETASITSNRGPFELVTHTGKTVTDQDYLGKFMLVYFGHTHCPDVCPIDLQIVSEVVYM
                     LGKDSAKVQPLFVTVDPARDTVKVMADYVKHFHPRLIGLTGTKKQITSAAEIYRMQSR
                     KSVPQDAEPGEYLIDHSAAIVLIGPDGGGVSLFPHGIAAKDIAADIERFIKPR"
     gene            complement(665..1057)
                     /locus_tag="QF359_12240"
     CDS             complement(665..1057)
                     /locus_tag="QF359_12240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87724.1"
                     /translation="MAATATQKQTLKIAFSSQVLDRPLMGPPGMAPKYLKALADSSVV
                     EIINYFSFNAELAEVKPKSKNPHALLLFKGKGKLAAVHLDARTTQLTAFGREIIIPPF
                     KVKELNPGIKCEIYWTGPGTTAGNLVCK"
     gene            complement(1205..1444)
                     /locus_tag="QF359_12245"
     CDS             complement(1205..1444)
                     /locus_tag="QF359_12245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87725.1"
                     /translation="MSYISNVNSAGDTYLLVLSDVGIRNFKDLKPKSLRVSNSRGTYK
                     LFVAAINNILGTKITYVGDYPAHKDAFIAMLKGKT"
     gene            2023..>2516
                     /locus_tag="QF359_12250"
     CDS             2023..>2516
                     /locus_tag="QF359_12250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87726.1"
                     /translation="MALLFLPTTFLITSIILKLDAGPSWLWSNMAPDYWYLFDSLNMV
                     NLNWPQSIAHPGTTVQFIGAAMIKLLFPLTSADQINQIILANPEHYLMLISRVLLSLN
                     VAALVFIGVAGYLTFKDIIGAMFLQIGPFLSQLTFKHSLHVSPEPLLVTVILVLCGVM
                     ILTLR"
BASE COUNT          630 a          568 c          556 g          762 t
ORIGIN      
        1 cacgtgccat cggagatgga acaaacacaa aaagcagcta tgtaatgaga cgattaaccg
       61 tccttcttgc atttctaact gcaattatca tgaatctcgg cgtcgatgcg cacggcccaa
      121 atcaaaaaaa caaggaaact gcttcaatca ccagtaaccg gggtccgttt gagctggtca
      181 cccataccgg caaaaccgtg accgaccagg actatctcgg aaaatttatg ctggtatatt
      241 ttggccatac ccattgcccg gatgtttgtc cgattgattt gcagattgtc agtgaggtcg
      301 tatatatgct gggcaaagat agcgccaagg tacagccgct atttgtcacc gtcgatcctg
      361 cacgggatac agtgaaggtt atggccgact atgtgaaaca ttttcatccc cggcttatcg
      421 ggctaacagg caccaagaaa caaattactt ccgccgccga aatatatcgc atgcaatctc
      481 gaaaatcggt gccgcaggat gccgagcccg gtgagtatct catagatcat agtgcggcga
      541 ttgtgctgat cggacctgat ggtggaggag taagcctctt tcctcacggt attgccgcca
      601 aagatattgc cgccgatatt gagcgcttca tcaaaccccg ctgatttgta tcgccgtcac
      661 ttttttactt acacaccaaa ttgccggcgg tcgtgcccgg accggtccag tatatttcgc
      721 attttatgcc tgggttcaat tctttaactt tgaaaggcgg aatgatgatt tcccggccaa
      781 aagcagtcaa ttgagttgtt cgcgcatcga gatgaacagc ggcgagtttt cctttacctt
      841 taaacaataa caaagcatgc gggtttttac ttttgggttt gacctctgcc agttcagcat
      901 taaacgaaaa gtagttaatt atctcgacaa cgctactatc tgccagcgct tttaagtatt
      961 ttggcgccat gccaggcggg cccattaaag ggcggtccaa cacttgactg gaaaaggcaa
     1021 ttttcagcgt ctgtttttgg gttgccgttg ccgccatttg cctggtcagc agggcgtttg
     1081 ggaagtttgc gctcttggta gatgcggtgt atcttaggac cgggattgcc ttcttatctt
     1141 ttagcagatc aggaaaatag tgccggtgtt cagcatttat tgttacaccc gctccggtga
     1201 caccctaggt tttgcccttt agcatagcta tgaaagcatc tttgtgggcg gggtaatctc
     1261 caacataggt aatcttagtg ccgagaatat tgttgattgc ggcgacgaat agtttgtagg
     1321 taccgcgtga attactgacc cggagggatt ttggtttcaa atctttaaaa ttcctgatgc
     1381 cgacatctga gagaacgagg agataagtat cgccggctga attaacatta ctgatatagc
     1441 tcatattaag cgggtcatat ttaaccccct attttccaga taagttgtca tattgctaat
     1501 ttttttggct gattctgcta ttagaatcaa agcaatatac acattagaac ggacgtgctc
     1561 cgtgtcaccc agcgggtgaa agcagacatt cccctttgcg gattgatttc gaccgccgtt
     1621 tgaagttgga atttcacggt tttgtctagt cccaattttc agtacctcct tgttgtagag
     1681 tttcaggcac tggcggcctc atgtttaatg actgatgggg tcggatatga ttgttctgtt
     1741 tcagtcaagt attaatgacg atcgttgcaa tcgcagctgg ggatgtcggt ttcttcatga
     1801 tcatgtttct ttccgtgttc actgctccag tattggaact aaagtgtaga acacggccgg
     1861 tccatcccat taacggacat aaataaaaac cgtcattgaa tattgctatt agacctactc
     1921 tttgtagaat gaacaaataa aattatccga ttccaccgta agcaaaaaag tttgatgtat
     1981 ttattcatcc gccgaattag ttcagttccc tatgggcacg tgatggcatt gctatttttg
     2041 ccaacaacat ttcttatcac gtcaattatt ctgaagcttg acgctggtcc ttcttggctt
     2101 tggtcaaata tggcccctga ttattggtat ctgtttgatt ctttaaatat ggttaatctg
     2161 aattggcctc aatccattgc ccaccccggc acaacggttc agtttatcgg tgccgcaatg
     2221 atcaaattgc tatttccatt aacttctgcc gaccagatta atcaaattat actcgcaaat
     2281 ccggaacact atttgatgtt gattagtcgc gtgttgcttt cactaaatgt cgccgcattg
     2341 gttttcattg gcgtagcagg atatttaaca tttaaagata taatcggcgc aatgtttctt
     2401 caaatagggc cgtttctatc acaactcact ttcaaacact ccctgcatgt atcccccgaa
     2461 cccttacttg tcaccgttat tcttgtttta tgcggagtaa tgattttgac tcttcg
//
LOCUS       DASCNL010000933         1720 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001905512, whole genome shotgun sequence.
ACCESSION   DASCNL010000933 DASCNL010000000
VERSION     DASCNL010000933.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001905512"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..907
                     /locus_tag="QF359_12255"
     CDS             <1..907
                     /locus_tag="QF359_12255"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HJO87727.1"
                     /translation="IFAGYRLFIIDEHAFARRFIYRFGIGFMVRQIAPAVTICDSYLR
                     RALMSDSLLWMVAAPKSITSLPFINEPTRTEFTYYLSQVDQIVDTGTYPTHEITRHYR
                     FLSNYAGKEIPPKPPKIIWREKSPPLRDGAPYVVLNPGSNEFGRRWPFENYMNIAERL
                     MAKGRRVVIVGGPGERPGDYRQRFGDDERAIDLIGKTSVPELLDVLNHATCVISNDTG
                     PAHLSIALETPTVVVVGGGHFGSFVPYPREICPPNAKFAFEEMPCYHCFWRCNKRDSK
                     FDVFPCVSEVGVDKVWRYTSELLNL"
     gene            1118..>1720
                     /locus_tag="QF359_12260"
     CDS             1118..>1720
                     /locus_tag="QF359_12260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014747858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HJO87728.1"
                     /translation="MSKNNYLQKTKDRKWQFWIDRGGTFTDIVARTPDGALIARKLLS
                     EDPDHYADAAIEGIRHLLEIGDGEAIPAENIQAVKMGTTVATNALLERQGEPTLLVIN
                     QGFKDALRIGYQNRPDLFAFKIELPEQLYTRVVEVPGRHDARGHELSPLDEDQARKGL
                     QAAFDDGLRAAAIVLMHGYRYPDHEQRLAKIAIDIGFTQIS"
BASE COUNT          437 a          414 c          434 g          435 t
ORIGIN      
        1 gatttttgcc ggttaccggc tgttcatcat tgatgagcat gcctttgccc gccggtttat
       61 ttaccgtttt ggcattggtt ttatggtgcg ccaaattgct cctgctgtaa caatctgtga
      121 ttcctatctg cggcgggcac tgatgtcaga tagtttattg tggatggtgg ccgcaccaaa
      181 atccattacc tctctacctt ttataaatga accaacgcgg accgagttca cttattattt
      241 gagccaagtc gaccaaattg ttgataccgg aacttatcca acgcatgaga taacgcgcca
      301 ttatcgattt ttgtctaact acgccggcaa ggaaatacca cccaaaccac ccaaaattat
      361 ctggcgcgaa aaatcaccgc cgctgcggga tggtgcaccg tatgtcgtgc tgaatcccgg
      421 cagcaacgaa tttggacggc gctggccttt cgaaaactat atgaatatcg ctgagcggtt
      481 aatggcaaaa ggtcgccgtg tggtgatcgt cggtgggccg ggcgaacggc ccggtgatta
      541 ccgtcaaagg tttggtgatg acgaacgagc tatcgatctc atcggcaaaa cctcggtgcc
      601 agaattattg gacgtgctta accatgctac ctgcgtgatc agcaatgata ctggcccggc
      661 ccatctatcc atcgcgcttg aaacgccgac ggtggtggtg gtcggtggtg gtcattttgg
      721 cagttttgtg ccctatccca gagaaatttg cccgcccaat gccaaattcg cctttgaaga
      781 aatgccgtgt tatcactgtt tctggcgctg caataagcga gactccaaat ttgatgtgtt
      841 tccctgtgtc agtgaagtag gggtcgacaa ggtatggcga tacacaagcg agttgctaaa
      901 tctttgagtc ttatccgtta tttctaaata acattagggg ttgacccatc taacaccatt
      961 tagatgttat catgggggca atgagaaaga gccaattaag caaatccaaa caagattgtt
     1021 tgatcaacca taagtatgaa tatttttcgt gatttattta cagcagtaac agatatcgtt
     1081 gggggtagga gttcagcaac acaaaaagtt ttaagaaatg agtaaaaata attacttaca
     1141 aaaaactaaa gacagaaagt ggcagttctg gatcgaccgc ggcggaacct tcaccgatat
     1201 tgtcgcgcgc acacccgatg gggcgctgat cgcccggaag ctgctctcgg aagacccgga
     1261 ccattacgcc gatgcggcta tagaaggcat tcgccacctg ctcgaaatcg gtgatggcga
     1321 ggcgatccct gcggaaaaca ttcaagccgt caaaatgggc acgaccgttg ccactaatgc
     1381 gttgctggaa cgtcagggag agccgaccct gctggtgatc aaccaaggtt tcaaggatgc
     1441 actccggatc ggctatcaaa accggccgga tctgtttgct tttaaaatcg agctgcccga
     1501 gcagctctat acccgagttg tcgaagtgcc agggcggcat gatgcaaggg gtcacgaact
     1561 ttccccgctc gatgaagacc aggcgcgcaa aggattacag gctgctttcg atgatggttt
     1621 acgcgctgcc gccattgtct tgatgcatgg ctatcgctat cccgatcatg aacagcgttt
     1681 ggctaagatc gccattgata ttggcttcac ccaaatctca
//
LOCUS       DASCNL010000934         1336 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001910136, whole genome shotgun sequence.
ACCESSION   DASCNL010000934 DASCNL010000000
VERSION     DASCNL010000934.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1336)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1336)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001910136"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1116
                     /gene="shc"
                     /locus_tag="QF359_12265"
     CDS             <1..1116
                     /gene="shc"
                     /locus_tag="QF359_12265"
                     /EC_number="5.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019084964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051007 - squalene-hopene cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HJO87729.1"
                     /translation="DALGIPKDHPNVVTTRQAIEKLLIFQDDEAYCQPCLSPVWDTGL
                     AAHAMLEASQTAGPRAIEGDTIAKSCDWLEDLQIRDCIGDWAKWRSDIRPGGWAFQYR
                     NDYYPDVDDTAVIAMILHRTGKKNYEPAIQRAAEWVVGMQSKSGGWAAFDADNEYHLL
                     ENMPYADHGALLDPPSADVSARCISFLTQIGYDSAHPAIRRGLTYLKQKQEEDGSWFG
                     RWGTNYIYGTWSVLSALNTAGENMSTDYVKNAVDWLLSMQHADGGWGEDCASYWPNHD
                     HLEFSLSLPSQTAWAVLGLMAAGEGKNGSVERGIQFLIETCLEDGDWHEEHFNAVGFP
                     RVFYLRYHGYRSYFPLLALARYRNLENTNTDRPAYGL"
     gene            1113..>1336
                     /locus_tag="QF359_12270"
     CDS             1113..>1336
                     /locus_tag="QF359_12270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87730.1"
                     /translation="MSGSKTVTRIGFITGIQKEAAILQKNSGTQKSDIKCAGANSKRA
                     YNLASDLAQGGSEMLISFGVAGALDPSLNPG"
BASE COUNT          335 a          321 c          344 g          336 t
ORIGIN      
        1 gacgctttgg gcattccgaa agaccatcca aacgtcgtga ccacccgcca agccatcgaa
       61 aaattactta ttttccagga tgatgaggcc tattgccaac cttgcttatc gccggtttgg
      121 gacaccggcc ttgccgccca tgccatgctg gaagccagcc agacagcggg cccacgcgcc
      181 attgaaggtg ataccatcgc taaatcctgt gattggcttg aagaccttca aattagagac
      241 tgtattggtg attgggcaaa atggcgatcg gatattcgtc ctggtggatg ggcttttcaa
      301 tatcgtaatg attattaccc cgatgttgat gataccgcgg tcatcgccat gatactccat
      361 cgaaccggta aaaagaatta tgaacctgct attcaacgcg ctgcagaatg ggttgttggt
      421 atgcaatcga aaagcggcgg ctgggcagcc tttgatgcgg ataacgaata tcacctgctg
      481 gaaaatatgc cctatgccga ccatggtgcc ctacttgatc cgccgagtgc cgacgtgtcg
      541 gctcgctgca ttagcttttt aacacaaatc ggctatgaca gtgctcaccc cgcgatccgg
      601 cgcgggttaa cttatctaaa acaaaagcag gaagaggatg gatcgtggtt tggccgttgg
      661 ggcaccaact atatctatgg cacgtggtcg gtattatcag cactgaatac agcgggcgaa
      721 aatatgagca ctgattacgt caaaaatgcc gtcgattggc tgctttcaat gcagcacgca
      781 gatggtggct ggggagaaga ttgtgccagc tattggccaa atcacgatca ccttgaattt
      841 tcactctccc tgccctcaca aacagcctgg gcggtgttgg gccttatggc ggcgggtgaa
      901 ggtaaaaatg gatcggtaga aagaggtatt cagtttctta ttgagacctg cctagaagat
      961 ggtgattggc atgaagaaca tttcaatgct gtcggtttcc caagggtgtt ttatttgcgc
     1021 tatcacggct accggtcata tttccctctg ctcgctttgg cgcgttaccg gaatctggaa
     1081 aacacaaata ctgatcgtcc ggcttatggc ctttgagtgg tagcaaaacc gtgacccgta
     1141 tcggatttat taccggcatt cagaaagaag cagcaattct ccaaaaaaat tctggaactc
     1201 aaaagtctga tattaaatgt gccggcgcga attccaaacg tgcgtataac ttggccagtg
     1261 atctcgccca aggtggtagt gagatgctca tcagctttgg cgtagccggc gctcttgatc
     1321 cgtccctaaa tccagg
//
LOCUS       DASCNL010000935         1151 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001912165, whole genome shotgun sequence.
ACCESSION   DASCNL010000935 DASCNL010000000
VERSION     DASCNL010000935.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001912165"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1151)
                     /locus_tag="QF359_12275"
     CDS             complement(<1..>1151)
                     /locus_tag="QF359_12275"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HJO87731.1"
                     /translation="LSPTMTDGKLAKWFKAEGDQVAAGDILAEIETDKATMEMEAVDD
                     GVLGKIVIAEGTEGVAINSLIAVMMEEGEDVSAADAAASTAPAPQATPPEEPAPAAQP
                     APQATLVEKGERIFASPLAKRMASDAGIDVAVISGSGPHGRIVKSDIEAAMAGGAQAA
                     PAAAQAPSGVPSLPAIIPSMGSYTEIPNSSARKIIAERLTASSRDIPSYMVTVDCEID
                     RLLEMRKDLNDRSPEGEDAYKISVNDFIIRAIALAMRKVPGVNTSWTEAAIQQYDDID
                     VSVAVATEDGLITPIIRGADQKGLAEISIAMKDLALRARDNKLMPEEFQGGGFTVSNL
                     GMYGVKEFTSIINPPQSCILSVGAGEQRAVVKDGALGIATVMTCTLASD"
BASE COUNT          261 a          318 c          288 g          284 t
ORIGIN      
        1 tgatcggatg ccaaggtgca ggtcatgacg gtagcaatac caagcgcgcc atctttgacc
       61 acagctcgct gttcacctgc gccaaccgac aggatacagg attgaggcgg attaataatt
      121 gaggtgaatt ccttgacgcc atacatacct aaattggaaa ccgtaaaacc gccaccttga
      181 aattcttctg gcatcagttt gttatcgcgc gcgcgcaacg ccaaatcttt catcgcaata
      241 gagatttcag ccaggccttt ttgatctgca ccgcggataa tgggagtgat caggccatcc
      301 tcggtcgcca ccgcaaccga aacatcgata tcgtcatatt gctggatggc agcttcagtc
      361 caggacgtgt taacacccgg tactttacgc atcgccaatg caatagcccg gataatgaag
      421 tcattaactg agattttata agcgtcttca ccctcgggag agcggtcatt caagtctttt
      481 cgcatctcca ataaccgatc aatttcacaa tcgaccgtta ccatatagct aggaatatcg
      541 cgggaacttg cggtcaatcg ttcggcaatg atcttgcggg cactggaatt ggggatttcg
      601 gtgtagctgc ccatcgatgg gattatcgct ggtaatgacg gcacgcccga aggagcctgc
      661 gcggcggctg gagcagcttg agcgccgcca gccatggcgg cttcgatatc acttttaaca
      721 atgcggccat gaggtccact gccggaaatt accgcaacat cgattcctgc atcagacgcc
      781 atccgttttg ccaacggact ggcgaaaatc cgctcccctt tctcgaccag cgttgcctgg
      841 ggtgcaggtt gagcagctgg ggctggttct tctggcggtg ttgcttgagg tgccggggct
      901 gtactcgccg cggcgtcggc agccgaaaca tcctcgccct cttccatcat gacagcgatc
      961 aaggaattga tggcaacgcc ttcggtgcct tcagcaatca cgattttacc caatacaccg
     1021 tcatctacag cttccatttc catggttgct ttatcggttt ctatttccgc caaaatatcg
     1081 ccggcagcga cttgatcgcc ctcggctttg aaccatttgg ccaattttcc atcggtcatg
     1141 gttggagaca g
//
LOCUS       DASCNL010000936         1561 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001914232, whole genome shotgun sequence.
ACCESSION   DASCNL010000936 DASCNL010000000
VERSION     DASCNL010000936.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001914232"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="QF359_12280"
     CDS             <1..330
                     /locus_tag="QF359_12280"
                     /inference="COORDINATES: protein motif:HMM:NF024591.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87732.1"
                     /translation="RSGGENIHPSEVEPHLMTHSNVTETAIIGIKDPAWGEMVVACVV
                     APDTDAAALDAHMQETPLTSYKRPKAYLFMDVLPRNAANKVLRRELQSLAEDAKQGAG
                     EFCFEEV"
     gene            complement(327..1043)
                     /locus_tag="QF359_12285"
     CDS             complement(327..1043)
                     /locus_tag="QF359_12285"
                     /inference="COORDINATES: protein motif:HMM:NF016627.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HJO87733.1"
                     /translation="MTNSVPALKKRGHIAREDVESGVLEEMITEGELQGHFVCLPEAE
                     RNKSRWNLLADVPPDEDIWLFAYGSLIWSPMIHFVEQRHAELYGFHRQFCMQTKMGRG
                     TPDRPGLMLALENGGSCKGIAFRITAKTREQELKVIWNREMVGGSYTPKFVKLHIGVG
                     SDKEIVRAIAFTMNHAHENYIGKLTIDEVAKTLAYAEGPLGKGEDYLFNTVSRLKELG
                     LVDHHLFKLARMIRALKGEA"
     gene            1201..>1561
                     /locus_tag="QF359_12290"
     CDS             1201..>1561
                     /locus_tag="QF359_12290"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJO87734.1"
                     /translation="MTKPNFLLFITDQHRADNLGCYGNDIIKTPNIDSIAGRGTRFDH
                     FYVANPLCMPNRSSLMTGRMPSVHGVRCNGTPLSLSARTYVEHLADNGYDTALIGKSH
                     LQNMTGNKPGWSPSSDDF"
BASE COUNT          388 a          409 c          370 g          394 t
ORIGIN      
        1 cgctcgggcg gggaaaatat tcacccttcc gaagttgaac ctcatctgat gacccactcc
       61 aacgtcactg aaaccgctat tatcggcatc aaagatccgg cctggggcga aatggtggtg
      121 gcttgtgtag tggctccgga taccgatgca gcagcgctcg atgcgcatat gcaggaaacg
      181 cctctcacca gttacaagcg tccaaaagcg tatctattta tggatgttct accacgtaat
      241 gccgccaaca aagttttacg ccgggaattg caaagtttgg ccgaagacgc caaacaaggg
      301 gcaggagaat tctgcttcga agaagtttaa gcctcgcctt taagtgcccg gatcatgcgg
      361 gcaagcttaa acagatgatg atcaaccaag ccaagctctt taagacggct gactgtattg
      421 aagagatagt cttcgccttt accaagcgga ccttcggcat aggccaaagt ttttgccacc
      481 tcatcaatcg tcaatttacc aatataattt tcatgggcat ggttcatggt aaaggcgatg
      541 gcgcggacta tctctttatc tgacccaaca ccaatatgaa gcttaacgaa tttcggtgta
      601 taagacccgc cgaccatttc acgattccaa atgactttta attcctgctc gcgggtttta
      661 gcagttatcc ggaaggcaat gcctttgcag gacccgccat tttccaacgc cagcataagg
      721 cccggacgat ccggtgtgcc gcgacccatt ttggtctgca tgcagaattg ccggtggaag
      781 ccatagagct cagcatggcg ttgttcaaca aaatggatca tcgggctcca aatcagggag
      841 ccgtaggcaa acaaccagat atcttcgtcg ggtggaacat cggcgagtaa attccaacgg
      901 gatttattcc gttcggcttc aggcaggcaa acaaaatggc cttgcagttc gccctcggtt
      961 atcatttcct cgagcacgcc gctttcaaca tcttcccggg cgatgtgccc gcgctttttt
     1021 aaggcaggta cggaattggt catctgttat aggtaggatg gcaatgggga tgctacaagc
     1081 ctaattatgc gatggaccgg acaccttcta gtcttgtcat tcggtttgat ctccgcttaa
     1141 ttacgtcgag atattttcac ttcacaaata tatttgtgaa atagactaat gagagacccc
     1201 atgacaaagc ctaattttct actttttatc accgaccagc accgcgccga taatcttggt
     1261 tgctatggca atgatatcat taaaacaccg aatattgaca gcatcgccgg tcgcggtacg
     1321 cgttttgacc acttttacgt cgccaatcct ctgtgtatgc ccaaccggtc ttccttgatg
     1381 actggccgta tgccgtcggt tcatggcgtg cgctgtaacg gcacgcccct atcgctgagc
     1441 gcccgcactt atgttgaaca tctcgccgac aatggttacg acacggcgct gatcggcaaa
     1501 tctcatctgc aaaatatgac cggcaacaaa cccggctggt cgccgtcctc cgatgatttc
     1561 g
//
LOCUS       DASCNL010000937         1215 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001918027, whole genome shotgun sequence.
ACCESSION   DASCNL010000937 DASCNL010000000
VERSION     DASCNL010000937.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1215)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001918027"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..718)
                     /locus_tag="QF359_12295"
     CDS             complement(<1..718)
                     /locus_tag="QF359_12295"
                     /inference="COORDINATES: protein motif:HMM:NF013053.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HJO87735.1"
                     /translation="MAEKVWDKYISERDQGVFDAAGFGHNSGFGERPVLMVIDVSYAF
                     CGDKREPILDSIKNWKLSCGKAAWDAMPVLQKLIAAAHAKGIPVMYTTGYGRDDKWDR
                     GSWAWKNPHGENLENTKSAPKTNRDGNDIVDEIAPEDQDIVVLKQKPSAFHEAPTESF
                     LNLLNADSVIVTGTTTSGCVRATAVDAFSRNYRVSVVEDACFDRSDVSHAVSLLDLHA
                     KYVDVLPSETVIDYIKNLPDN"
     gene            complement(786..>1215)
                     /locus_tag="QF359_12300"
     CDS             complement(786..>1215)
                     /locus_tag="QF359_12300"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO87736.1"
                     /translation="KNVAAYCAVGIEVEVNDEAEVKLHRAWISCDAGEVVDPDGLTAQ
                     LEGGLIQAASWSLYEQVTYDGGGITSRDWETYPIIRFNNIPEVKAILMERPGEPFLGA
                     GEAVAGPTGGAIINAIYSAVGLRLRRMPFDPDAIKLVAMQ"
BASE COUNT          300 a          333 c          276 g          306 t
ORIGIN      
        1 aattatcagg caaattttta atatagtcga ttaccgtttc gctcggtaat acatcaacgt
       61 atttggcgtg caagtccagc aatgaaaccg cgtgcgagac atctgaccgg tcaaagcaag
      121 catcttcgac aacgctgaca cgataattgc ggctgaaagc atcaacggcg gttgcccgca
      181 cacagccgga cgtcgttgtg ccagtgacga tcacagaatc tgcatttaag agattaagaa
      241 aactttctgt cggcgcttca tgaaaggcgc ttggcttttg cttgaggacg acaatatcct
      301 gatcttccgg tgcaatctca tcaacgatgt cattgccatc ccggttggtc ttgggtgcgg
      361 atttggtatt ttcgagattc tcaccatggg gatttttcca ggcccaactg ccgcggtccc
      421 atttatcgtc ccggccgtag ccggtcgtat acataaccgg aattcctttg gcgtgcgccg
      481 ccgcaatgag tttttgcaaa accggcatgg cgtcccaggc cgccttgccg caggacagtt
      541 tccagttttt gatcgagtcc aaaatcggct ctcgcttgtc accgcaaaag gcatagctga
      601 catcgataac catcaaaact ggacgctcgc caaagccgga attatggccg aagccagccg
      661 catcaaatac accttgatca cgctcggaga tatatttatc ccaaactttt tccgccaaag
      721 tttctatcct cgttttcgta atctataaaa taacgataca ctcgcgagag caacacatat
      781 ttttattact gcattgccac caatttaatc gcatccgggt cgaacggcat gcggcggagg
      841 cgaaggccaa ctgcactgta gattgcgtta attattgctc cgccagttgg tcctgcgact
      901 gcttctccag cgcctaagaa cggctcgcca ggacgctcca tcaggatggc tttaacttcg
      961 ggaatattat taaagcggat gatcgggtag gtttcccaat cccggctggt aataccgcca
     1021 ccgtcatagg tgacttgttc atagagcgac caactggccg cctgaataag cccaccctcc
     1081 aattgtgctg tcagaccatc cggatcaacg acttcaccag catcacagct tatccaggcg
     1141 cggtgtaatt tgacttccgc ctcatcatta acctctacct cgataccaac agcacaatag
     1201 gcggcgacat ttttg
//
LOCUS       DASCNL010000938         1690 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001919356, whole genome shotgun sequence.
ACCESSION   DASCNL010000938 DASCNL010000000
VERSION     DASCNL010000938.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001919356"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..386
                     /locus_tag="QF359_12305"
     CDS             <1..386
                     /locus_tag="QF359_12305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87737.1"
                     /translation="AIASISAVFVISLQGVLQPILKTGYDLRPTANYLAKAQQQGYTI
                     AHFGKYHGQFQFLGRLEKPVIITGDGEVIKWLANTPQAKIVSVHTKLDSNGPKPDFVQ
                     KYRHKYLTVWDRATVLAHPKAPHRN"
     gene            complement(388..1068)
                     /locus_tag="QF359_12310"
     CDS             complement(388..1068)
                     /locus_tag="QF359_12310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HJO87738.1"
                     /translation="MNSAKQLPFEFERRPSLSGDDFFVAPCNQEAVAWLDKWPDWPSP
                     FVIIYGPPGCGKSHLSHVFMAKSGALALTSAGINDAGLPSILASSKNLVADDGDTGFG
                     EEALFHIYNDLALRDGYMLITAERAPKDWPVKLADLASRLKASPAVEIGLPDDDLIKS
                     VIVKLFSDRQIRVETGVIDYVVKRMERSLDAARQFVDAADKTALVEKKGITLPIARHV
                     LKELGAEE"
     gene            complement(1065..>1690)
                     /locus_tag="QF359_12315"
     CDS             complement(1065..>1690)
                     /locus_tag="QF359_12315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HJO87739.1"
                     /translation="LSLILITPVVSYYLLRDWDKIVAKVDSWLPRDYAPAIRSVVKDI
                     DITIAGFVRGQGTVCLFLAVFYGAGLTIVGLDFGLVVGITTGLISFIPYFGMLVGMAT
                     ALAIAIVQFGEVVPVVLVLIVFGAGQIIESMFLTPKLVGEKVGLQAVWVIFALMVGGA
                     TIGFTGVLLAVPVAATIGVLVRFFLAQYLASPLYSGSGNISNDDGSS"
BASE COUNT          489 a          459 c          380 g          362 t
ORIGIN      
        1 ttgccattgc ctccatcagt gcagtttttg ttatctcgct tcaaggggtg ttacagccga
       61 tcttaaagac aggatatgac cttagaccga cggcaaacta tctcgccaaa gcccaacagc
      121 aaggctacac catcgcccat ttcggaaaat atcacggaca atttcagttt ttgggaaggt
      181 tggaaaagcc ggtaatcatt accggcgatg gggaggttat caaatggcta gccaatacgc
      241 cgcaagccaa aatcgtctcc gtccatacga aattggatag caacggccca aaaccggatt
      301 ttgtgcaaaa gtaccgccac aagtatctta ctgtttggga ccgcgctacg gtgcttgctc
      361 acccaaaggc ccctcataga aattagttta ctcttctgct cctaattctt ttaacacgtg
      421 cctggcgatc ggcaaggtaa tgcccttctt ttccaccagc gcggttttat ccgccgcgtc
      481 gacaaattgt cgagccgcat caagcgagcg ctccattcgt ttaacgacat aatcaatcac
      541 accggtctcc actcgaattt gacggtcaga gaacagtttt actatcacag atttaatcaa
      601 atcatcatcc ggcaaaccta tttcaaccgc cggtgaagcc ttcaggcgtg aggctaggtc
      661 ggccagcttt actggccaat cctttggcgc gcgttcggcc gtgatcaaca tatacccatc
      721 gcgcaatgcc agatcattat aaatgtgaaa caaagcttct tcgccgaagc cggtgtcgcc
      781 atcatcagcg acaagatttt ttgacgacgc cagaatgctc ggcagtccgg catcattgat
      841 gccggcagaa gtcagtgcga gcgccccact tttggccata aagacatgac tgagatgaga
      901 ttttccacag ccgggagggc catagatgat aacaaagggt gagggccagt ccggccactt
      961 atcgagccag gcgacagcct cctgattgca gggtgcaacg aaaaaatcat cgccgcttaa
     1021 agacgggcgg cgttcaaatt cgaacggcaa ttgttttgct gaattcaaga cgaaccgtcg
     1081 tcatttgaaa tattaccgct gcccgaataa agcgggctgg caagatattg cgccaggaaa
     1141 aacctaacca ggacgccaat ggtggccgcc accggcacgg ccaggagcac gccggtaaag
     1201 ccgatagtcg caccacctac cattaaggca aaaattaccc agacggcttg gagaccaact
     1261 ttctcaccca ccaatttagg cgttaggaac atcgattcaa ttatttgacc ggcgccaaag
     1321 acaatcagca ccaggacaac aggcacgact tcgccaaatt ggacaatcgc tatcgccaaa
     1381 gctgtcgcca tgccaaccag cataccgaaa taaggaataa aggaaatcag cccagtcgta
     1441 atgccgacaa caagaccaaa atcgagtcct acaatggtta agccagcacc ataaaataca
     1501 gccaaaaaca agcagactgt tccctggcca cggacaaaac cagcgatggt aatatcgata
     1561 tctttgacta cgctgcgaat cgccggagca taatcacgcg gcaaccagct atcaactttg
     1621 gcgacaattt tgtcccaatc tctaagcaag tagtaactca ccactggcgt aatcaagata
     1681 agtgaaagta
//
LOCUS       DASCNL010000939         1398 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001920958, whole genome shotgun sequence.
ACCESSION   DASCNL010000939 DASCNL010000000
VERSION     DASCNL010000939.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001920958"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="QF359_12320"
     CDS             complement(<1..350)
                     /locus_tag="QF359_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87740.1"
                     /translation="MSSNAENFSNLVPLAPEGRFDGIDRPYSPADVEKLRGSVVVSQT
                     LAERGANRLWELLQTEDYINSLGAMTANQAMQHVRAGLKAIYLSGWQVAADANTAGTM
                     YPDQSLYPANAAPEL"
     gene            561..>1398
                     /locus_tag="QF359_12325"
     CDS             561..>1398
                     /locus_tag="QF359_12325"
                     /inference="COORDINATES: protein motif:HMM:NF024252.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJO87741.1"
                     /translation="MALRTQKVFAGTRIRRLRRELNLTQMQMADDLGISTSYLNLVER
                     NQRPLSAQLLLRLADAYDINLKELSGDDDSQAAASLKEVFSDPIFEGLKLSNHELTDL
                     VGASPSAAQSVVTLYRAYRESLTSNSAMAEQLASREGTAQTGALRFPIEEVRDYFHDT
                     NNHFPELENAAETLWVDAELTLDDLYVGIRDHLKTAHDISVRIMPIDVLPDTTWRLDR
                     HSRRLFLSEVLNAPSRTFQLALHAGLLGHRNLLDEMIARTSLQGDEAKQLCRLGLANY
                     FAG"
BASE COUNT          360 a          339 c          342 g          357 t
ORIGIN      
        1 agctcgggag cagcgtttgc cggatagagg ctttgatctg gatacatggt gccggcggtg
       61 ttagcatcgg cggcaacttg ccaaccggaa agataaattg ctttcaagcc ggcgcgaacg
      121 tgttgcatgg cctgattagc ggtcatggca ccaagcgaat taatgtaatc ctcagtctgc
      181 agaagctccc acaagcgatt agcgccgcgt tcagccaaag tttgagaaac gacaaccgag
      241 ccccgcagct tttcgacatc tgcaggcgaa taaggccggt cgatgccatc gaaccggccc
      301 tcaggtgcca aggggaccag gttgctaaaa ttttctgcgt tgctgctcat aacggttttc
      361 ctttcttcaa aaccgggtgt ttgataaaaa agtaatgatt aaattaataa ccacctattt
      421 aattagtgca ttttttacta aaatcagatt aaagtctata acttattgaa attaacaggt
      481 ataattgata tagttttata acaagagttt tgtcaaattg taaaagttgt aaaattaaaa
      541 aggttgagaa tcaataaatt atggctttac ggacccaaaa agtctttgct ggcacccgca
      601 ttcggcgctt gcgacgggaa ttaaatttga cccagatgca aatggccgat gacctcggca
      661 tctcgaccag ctatctgaat ttggtcgagc gcaaccagcg gccgcttagt gctcaactcc
      721 tgctgcggct ggcggacgct tatgatatca atctcaagga actttccggc gatgatgaca
      781 gccaggcagc agcctcgctc aaagaggtgt tttccgaccc tatctttgaa gggcttaagc
      841 tttcaaacca tgaattaacc gatcttgtcg gcgccagccc atcggcagcg caatcggtgg
      901 tgacacttta ccgcgcctac cgggaatcgc taaccagtaa ttcagccatg gctgaacagc
      961 tggccagtcg ggaaggcacc gcccaaaccg gggcgctgcg tttcccgatt gaagaagtgc
     1021 gtgattattt tcacgatacc aataatcact tcccggaatt ggaaaacgcg gcggaaactt
     1081 tatgggtgga tgcagagctt actctagatg acctctatgt aggaatccgg gatcatctca
     1141 aaaccgcgca tgacatttcg gtccggatca tgccgattga tgtcttgcca gatacgactt
     1201 ggcgtttgga ccggcacagc cgccggttat ttttatctga agtcctgaac gcaccgtccc
     1261 gtacttttca gctcgccctc catgccggac ttctaggtca tcgtaatctt ctggatgaaa
     1321 tgattgcccg aaccagcttg caaggtgatg aagctaagca actttgccgt ctgggtctgg
     1381 ctaattattt tgccggtg
//
LOCUS       DASCNL010000940         2224 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001924913, whole genome shotgun sequence.
ACCESSION   DASCNL010000940 DASCNL010000000
VERSION     DASCNL010000940.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001924913"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1263
                     /gene="der"
                     /locus_tag="QF359_12330"
     CDS             <1..1263
                     /gene="der"
                     /locus_tag="QF359_12330"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HJO87742.1"
                     /translation="QGRVGDLDIEIIDTAGFEDIHDDSLEARMREQTDRAVEDADIAL
                     FLIDARAGITPLDSHFAQWIRTQEIPVILIANKCEGKAGEPGLYESYGLGLGDPLPFS
                     AEHGEDMADLFQALLPFAEQTGATEPIGKQDEEISEDFDPDSEVEDEDFSGPIQMAIV
                     GRPNVGKSTLVNRLIGEDRLLTGPEAGITRDSIAVEWNQDGQSLKLIDTAGLRRKAKV
                     QDKVESLSAMGSYRAIQYAQIVVLVLDGQFILEKQDLTIARQVIEEGRVLIIAINKWD
                     AVKDHKQARQNLNDRLQTSLPQVRGIPIVTLSALTGKATDKLIPTAFETFEIWNRRVP
                     TGRLNQWLEMMTERHPPPMASGRRIRLRYMTQVKTRPPTFVVFSSKGTALPEAYRRYL
                     INGIREDFDIPGVPIRLLVRKGNNPYVD"
     gene            1604..1885
                     /locus_tag="QF359_12335"
     CDS             1604..1885
                     /locus_tag="QF359_12335"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HJO87743.1"
                     /translation="MSCDLADSTALSEKLDPEDLREVISTYQNTCTALIKKYDGYIER
                     FMGDGILIYFGYPIASEDCCCAAAAQAGAALAGFCPASLVPFTCSASHI"
BASE COUNT          570 a          536 c          575 g          543 t
ORIGIN      
        1 caggggcgcg tcggcgacct tgatattgaa atcatcgata cagccggctt tgaagatatc
       61 catgatgaca gtttggaagc ccgtatgcgc gagcaaacgg accgggcggt tgaagatgct
      121 gatatcgcgt tatttctgat tgatgcgcgc gctggaataa cgccgctgga cagccatttt
      181 gcccaatgga tcaggacgca ggaaattccg gttattttga tagccaacaa atgcgaaggt
      241 aaggctggtg agcccgggct atatgaatcc tatggccttg gattaggtga tcccttgccc
      301 ttttcagctg aacatggtga agacatggct gatttattcc aagccctgct accgttcgct
      361 gagcaaactg gagccactga acctattggc aagcaagatg aagagatatc agaggatttt
      421 gaccctgatt ccgaagtcga ggatgaagac tttagcgggc ctatccagat ggcaattgtc
      481 gggcggccaa atgtcggcaa atcaacgctg gtcaatcgtt tgattggtga ggaccgcctc
      541 ctcactggcc cggaagctgg aatcacccgg gattcgattg ccgttgaatg gaaccaggat
      601 ggccaaagct taaaattgat cgataccgct ggcctccggc gcaaagcgaa agtacaggat
      661 aaggttgaga gcctttcagc gatgggttcc taccgcgcca tccaatatgc ccaaattgtc
      721 gtcttggtgc tagacggaca gtttatactg gagaagcaag atttaacaat tgcacgccaa
      781 gtgattgaag aaggccgcgt gctgatcatc gcgattaata aatgggatgc ggtcaaagat
      841 cacaagcagg cgcgccaaaa cttaaacgac cgcttacaaa cttccctgcc acaagtgcgt
      901 ggcatcccaa tcgtcacgct ttcagcgctt accggtaaag cgactgataa acttatcccc
      961 accgcttttg aaactttcga gatttggaat cgccgcgtac cgacaggccg gctaaaccag
     1021 tggctggaaa tgatgaccga acgtcatccg ccaccaatgg ccagcggccg gcgcatccgc
     1081 ttgcgctaca tgacccaggt caaaaccagg cctccgacgt ttgtggtgtt ctcgagcaaa
     1141 ggcactgccc tgccggaagc ttatcgccgc tatctcatca atggcatccg ggaagatttt
     1201 gatattcccg gcgtgcctat tcgcttactt gtgcgcaaag gcaataatcc ttacgtcgat
     1261 tagcagctta tcgtttattg ccagaatttc ttggcgtatg gttcagctat tctgttaggg
     1321 gaactaaaaa aaacggtcgg cttgatgtct aaccttataa aatgcgtatc gtgcaattca
     1381 gaaaatccgc agagcaataa attctgcggt ccttacggtg ctaaattacc attgatatgt
     1441 ctggcctgtg atactgaaat tccggctggt aataaaactt gtggtcagtg cggcacggcg
     1501 ttggaaccac ttacgagccc gcagtaacga aacccatgac acaggaaaat ctgaaaaatc
     1561 atcagaagtc gatcacgaag ccgaacggcg gtagttgact gtgatgtcct gtgatctcgc
     1621 cgactcgaca gcgttatctg agaaactcga cccggaagat ttgcgtgagg taatttcaac
     1681 ctaccaaaat acctgtactg cattgatcaa gaagtatgat ggctatattg aaagatttat
     1741 gggtgacggt atcctgatct attttggtta cccgatcgcc agcgaagatt gctgctgcgc
     1801 agcggcggcg caggcagggg cggccctggc gggtttttgc cccgcatcgc ttgtcccatt
     1861 tacttgctct gccagccata tttaactcca tgacgcatgt gcgtattggt atcagttagc
     1921 acaggttttg cggttaatag caaatgacgt cccacacaat ggcagacacc acatattcag
     1981 cagcctgcga cttgccaaaa gtaggtggca acggttaaca gagaccaaca gctgctactt
     2041 ggcatcattt gatgtccggt atctggggca aagcagtcga aaatagctgg tcaaaattcc
     2101 ggctgctcct gacccattgt atggaccgac cgtgtgttgc aagaattaat ttgagatagc
     2161 gggtttggtc atgcgttaat gtattcggct tcattgtgga acttatgttc cgagccatca
     2221 tggg
//
LOCUS       DASCNL010000941         1041 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001927824, whole genome shotgun sequence.
ACCESSION   DASCNL010000941 DASCNL010000000
VERSION     DASCNL010000941.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001927824"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(462..1041)
                     /locus_tag="QF359_12340"
                     /pseudo
     CDS             complement(462..1041)
                     /locus_tag="QF359_12340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977225.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
BASE COUNT          258 a          297 c          229 g          257 t
ORIGIN      
        1 tcttcgccca ttacgtcggc cacggcgttc tcctttccat atgatccggt tggttgagca
       61 acaacgaagt tcgcctccag cttcatgccc tggcctgcaa cctcgccaac ttcatgcgga
      121 ctttagccct gcctgaagaa gtagagcatc ggtcgttatt atcgctatgc tcttggttca
      181 cacaaataaa taatcgcgcc cgcgcgtaat tttcccgcct aaaatactac tgccagtatg
      241 tagtatggag aatcgaagtt tgctaaactg tgattctccg cttagggcat aacccgaaca
      301 aggaaagtag ataagtatgt ataccccgat tgatctgcct gttcactttt ggcctccttg
      361 tcatgagggg gccagaatat agaaaaattt gaaaaatatg ccagacgttc gtagcgtctg
      421 atgaaaaccc cgtgaggtca cgaacccgcg gggttttacc attattgctc tgaaactcgc
      481 cgggcggcga tgagaaattc cttatttcct tccggcccgg taatcggact ttcggcaatg
      541 ccctcgactt gccaatcagc caagctatcc agccaatcaa aaatccgctg gcaaacttct
      601 tcatgcaacg ccggatcacg caccacacct tttttaccaa cttgaccttt accgacttca
      661 aattgcggtt tgaccaaggc aattaattta gcaccttttg cagctaaacc cattggtgcc
      721 ggtaaaatcg tttgcaggcc aataaagctc gcatcacagc agataaaatc aatcttatcc
      781 ggcacgtcgt ctgctgtgat atggcgcgca ttggtgcgtt ccagcacgac cacccgttca
      841 tcattacgga tttccaggcc agttggccat ggccaacatc caccgcatag accttggccg
      901 cgccccggct cagtaacacg tccgtaaagc cgccggttga agccccaaca tcgagacagg
      961 tggcgccggt gatattaatc tgaaaatgat ccagcccatg atcgatcttg agcccgccgc
     1021 gcgataccca gggatgatcc t
//
LOCUS       DASCNL010000942         1055 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001930910, whole genome shotgun sequence.
ACCESSION   DASCNL010000942 DASCNL010000000
VERSION     DASCNL010000942.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1055)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001930910"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="QF359_12345"
     CDS             complement(<1..302)
                     /locus_tag="QF359_12345"
                     /inference="COORDINATES: protein motif:HMM:NF023176.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3306 domain-containing protein"
                     /protein_id="HJO87744.1"
                     /translation="MSDETTKDGNFINRWSQRKTAERDNIPEQPVAALPADAAVETPE
                     NDEAAIDPEDLPDIDTLDKDSDYTVFMKKGVPEELKRLALRKLFHSDPALSVLDGL"
     gene            complement(299..853)
                     /locus_tag="QF359_12350"
     CDS             complement(299..853)
                     /locus_tag="QF359_12350"
                     /inference="COORDINATES: protein motif:HMM:NF023177.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3305 domain-containing protein"
                     /protein_id="HJO87745.1"
                     /translation="MSDEKKQIMPLGVVLQRRVSDHEWLDYDWSVASVLPGAADTEDW
                     KELRSGTDQEGDWAQFHAGTLPLEIFRKETEGYKFNLTLEQPSVFIVLRESDDEEDEH
                     DLYPFLVTVCPYEAQDYLDSGEEIVESVPMPEAVMAWLADYIEEHYVDEPFKKRKQKK
                     FDPRKEGFDKPPPPISHKYNRPSS"
BASE COUNT          269 a          265 c          225 g          296 t
ORIGIN      
        1 ttgagcccat ccaacacgga aagcgccggg tcactgtgga ataatttgcg caatgccaac
       61 cgtttgagtt cttccggcac gcctttcttc ataaacaccg tgtaatcgga atctttatcg
      121 agggtatcaa tgtccggcaa atcttccgga tctatcgccg cttcatcatt ctcaggtgtt
      181 tccacagcgg catcggccgg cagcgccgct accggttgct caggaatatt gtcacgttca
      241 gccgttttgc gctgcgacca gcggtttatg aaattgccgt ctttggtggt ctcatcgctc
      301 atgatgatgg ccggttatat ttatgactga tcggcggtgg cggtttatca aagccttctt
      361 tgcgggggtc aaacttcttc tgcttgcgtt ttttaaaggg ctcatcgaca taatgttctt
      421 caatataatc tgccagccaa gccattacag cttccggcat cggcacggat tcaactatct
      481 cttcgccact atccaaataa tcctgggcct catacggaca tacagtgaca aggaaagggt
      541 agagatcatg ttcatcctct tcatcatcgc tttcgcgcaa aacgataaag actgaaggtt
      601 gctccagagt cagattaaat ttgtagcctt ctgtctcttt acggaaaatt tcgagcggta
      661 aagtgccggc gtgaaattgt gcccaatcac cctcttgatc ggtcccggac ctcagctctt
      721 tccagtcctc agtgtcggct gcacccggca atacggaggc gacagaccag tcatagtcta
      781 gccattcatg atccgaaacc cggcgttgaa gaaccacgcc taacggcata atctgttttt
      841 tttcgtcgct caaacccaag cctttcaagc tgacttcatg taattaacag gttaaaacga
      901 attaattgtt ttgtcaccga acatgaattt tgccataaaa tcaattttta taataaagtg
      961 gcgaatggtc actgacctca aactcttaaa attaaataga aattatagct agacacctgg
     1021 gtaagcacta acacatgtct gattttaacg aagca
//
LOCUS       DASCNL010000943         1689 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001932047, whole genome shotgun sequence.
ACCESSION   DASCNL010000943 DASCNL010000000
VERSION     DASCNL010000943.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001932047"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1038)
                     /locus_tag="QF359_12355"
     CDS             complement(<1..1038)
                     /locus_tag="QF359_12355"
                     /inference="COORDINATES: protein motif:HMM:NF015413.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HJO87746.1"
                     /translation="MDENVIGVYESSAANELTSEFVDSIHLALDQNETTEAKNLAQSL
                     HYADLADLLENLAHAQRQELVEALRSDFDPNVLAELDDTVRERVIDQLGLSQVAEVVA
                     GLDTDDALEVVEELEPQEQREILESLPDGERALIEEGLSYPEDSAGRLMQRDVVAVPL
                     HWSVGQAIDYMRDTENLPTDFFDIFLVDPRHNPVGTVPLSRVMRTRREIDLTQVMRKH
                     IKIVPGTMDQEEVAFLFRQRDLISAPVVDESNRLVGVITVDDIVDVIHEEHEEDIMRL
                     AGVGEADDLYSAVIDTMKSRFSWLLIHLVAAIIAAYVISFFAGTIEEMVALAVLMPIV
                     AAMGGTASAQTL"
     gene            complement(1051..>1689)
                     /locus_tag="QF359_12360"
     CDS             complement(1051..>1689)
                     /locus_tag="QF359_12360"
                     /inference="COORDINATES: protein motif:HMM:NF013665.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HJO87747.1"
                     /translation="MLSGATGRYTDHLPHLFRIIGLKPEVSHAASMSMLILSSGIYFL
                     VDPYVNHGPTAEQIADFTVLAAREVRRFGITPKAAMLSHSNFGSSNRPTARKMRDAVD
                     LIRKLDPRLEVDGEMHAETALSEDLREKLVSDSNLTGSANLLVLPSLDAANISYGLIR
                     MLGNGMAIGPMLLGMKQPAHILQEGATARGIINMTALMVVEAQSETDGELPL"
BASE COUNT          431 a          464 c          399 g          395 t
ORIGIN      
        1 taaagtctgc gccgaggccg tgccccccat ggcggcaaca atcggcatca gcacagccaa
       61 agccaccatc tcttcgatgg taccggcaaa aaaactaatt acgtaagccg caataattgc
      121 cgctaccaaa tggatgagca gccaggaaaa acgcgacttc atggtatcaa tgaccgcgga
      181 atagaggtcg tcagcttcac cgacaccggc gaggcgcatg atatcttctt cgtgttcctc
      241 atggataaca tcgacgatat catcaacggt aatgacgccg accagccggt tactttcatc
      301 tacaaccgga gctgagatca aatcgcgctg ccgaaacaga aacgcgacct cctcctggtc
      361 catggtgccc ggcacaatct taatgtgttt gcgcataact tgagtaaggt cgatctcgcg
      421 gcgggtccgc ataacccggc tgagcggtac tgtcccgacc ggattgtggc gcggatcaac
      481 cagaaaaata tcgaagaaat ccgtcggcag gttttctgta tcgcgcatat agtcaatcgc
      541 ttggccaact gaccagtgca acggcacagc gacgacgtcc cgctgcataa gacggccggc
      601 actgtcttcc gggtaagata aaccttcttc aatgagcgcc cgctctccgt ccggtaagga
      661 ttcaagaatt tcgcgctgtt cttgcggctc gagttcttca acgacttcaa gtgcatcatc
      721 ggtatctagc ccggcgacaa cttcggcaac ttgagataga ccaagctggt caatgacgcg
      781 ttccctgacc gtgtcatcaa gttcagccaa aacattggga tcgaaatcac tgcggagcgc
      841 ttcgacaagt tcttgccgct gagcatgggc gagattttcc aacagatcgg cgagatccgc
      901 gtagtgcaga gattgcgcta aattttttgc ttcagtggtt tcattttgat cgagtgcgag
      961 atgtatcgag tctacaaatt cagacgttaa ttcattagca gcactcgact catacacacc
     1021 aatgacattt tcatccatcg cctacatcct tcataggggc aactctccgt cggtctcgct
     1081 ttgggcttcg acgaccatca aggcagtcat attaataata ccgcgcgcag ttgcaccttc
     1141 ctggagaata tgcgctggtt gtttcatacc caataacatt ggaccaattg ccataccatt
     1201 gcccagcatt ctaatcagac cgtaagaaat attggcggca tccagcgaag gcaaaaccag
     1261 caaattggcc gacccggtca aattagaatc cgagaccagc ttttcgcgta aatcttcaga
     1321 caatgccgtt tcggcatgca tctcgccatc tacttcaagt ctaggatcaa gcttgcgaat
     1381 taaatcgacc gcatcccgca tctttctcgc tgtcggccga tttgaactgc caaaattgga
     1441 atgtgacagc attgcggctt ttggtgtaat accgaaccgc cgcacttctc gcgccgccaa
     1501 cacggtaaaa tcggcaatct gttcagccgt cggtccatgg tttacgtaag gatcaactag
     1561 aaaataaatt ccgctggaca ggatcagcat gctcattgag gccgcatggc ttacctccgg
     1621 tttcaacccg attattctga acaaatgcgg taggtgatcg gtgtagcgac cggtggcacc
     1681 gctgagcat
//
LOCUS       DASCNL010000944         6693 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001937433, whole genome shotgun sequence.
ACCESSION   DASCNL010000944 DASCNL010000000
VERSION     DASCNL010000944.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6693)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6693)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6693
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001937433"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            80..172
                     /locus_tag="QF359_12365"
                     /pseudo
     CDS             80..172
                     /locus_tag="QF359_12365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611538.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(488..1339)
                     /locus_tag="QF359_12370"
     CDS             complement(488..1339)
                     /locus_tag="QF359_12370"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87748.1"
                     /translation="MTMIDAHQHFWRMAKGRHQWSPELGCILNRDFVPNDYRHECQLA
                     GVEGGILVQSVNDSSETEEFLDLAAEDDSILGVVGWVPLSDPQAASEKIEQYLKLPKF
                     VGIRHLINFETDEAWLLRPNVLEAIYIVDHYNLVLDTVPVNERQMRSVMTVADRCPTL
                     EIVIDHLGCPPVNTRSWESWASLIEEAAAFQNISIKLSIGLNVISSWRWNTEELRPYT
                     DHVLTKFGADRIMAASNWPVILLGGNYPEIWKGTTALLHDLDPTQRADVLSKTARRVF
                     KLPSNAP"
     gene            complement(1403..1858)
                     /locus_tag="QF359_12375"
     CDS             complement(1403..1858)
                     /locus_tag="QF359_12375"
                     /inference="COORDINATES: protein motif:HMM:NF012417.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJO87749.1"
                     /translation="MQQDKQKEVKMFPLEQQKVTIIRPSEIGTDVKYEPPLQIGFGIN
                     DETVGDANAVMGRTVLPPGAAPDPTHYHSNNNVCWHIISGKINLWYARSDMSHRKDLV
                     LEPGDFVFIPAGTIHVISNALQDENSELVFCYIGVGNTDAADTVWMDEK"
     gene            complement(1893..2669)
                     /locus_tag="QF359_12380"
     CDS             complement(1893..2669)
                     /locus_tag="QF359_12380"
                     /inference="COORDINATES: protein motif:HMM:NF004796.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJO87750.1"
                     /translation="MNEGTVTFVQNGLIGHILFDRPQARNAMTWKMYDELSQACDTVI
                     ATPDLRVLTLRGAGGKAFVAGTDISQFREFSDGEDGIEYEKKMEDYFRRLLSVPIPTV
                     AIIEGWAVGGGLAIATACDIRIATPDAEFGVPIARTIGNCLSMENLSRLVNAFGVSRV
                     KKMLLLSETLTAEEAEIAGFLCEIVPADNIGDRAAEICARVIENAPITLRTMKQALGR
                     LTESTLPNGDDLIRECYGSEDFKTGIEGFFAKKAPVWAGK"
     gene            2971..4575
                     /locus_tag="QF359_12385"
     CDS             2971..4575
                     /locus_tag="QF359_12385"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:NF002550.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HJO87751.1"
                     /translation="MSDKNLFDYIIIGAGSAGCVLADRLSASSQHRVLLLEAGPKDTS
                     PWIHIPIGYGKHFTNKALNWMYNSEDGPDWVQRPVYQPRGKVLGGSSSINGLVYMRGN
                     KTDYDHWRQLGNTGWSYDDVLPYFRKSEDQQRGENDYHGVGGPLAVSNPRDKHPLAEA
                     YIEAAVSLGYSYNEDFNGAEQEGFGPTQWNTRNGRRCSTSVAFLKPAHKRKNLTVISE
                     ALTSRLLFKGKKATGVEYLRGNQIQTARTQGEVIVAGGAFNSPQLLQLSGVGPGELLQ
                     SLGIDVVHDMPGVGENLQDHYNGPIFYRSKEPFTANDIVNNFGTKMLAGVNYVFRRRG
                     LLEMGSVYGCGFLYVDKEAVAPDIQALLMLFSGEQVGGPPHPFSGFSAVAALTRPESR
                     GTVMITSRDPHSAPAIQPNYLDAEKDRTTLIGGMRAMREILAQPVIAKYIEAEHEPGP
                     GVNSDEALLKYIRERGRTSYHPVGTCRMGSDDKAVVDPRLRVHGMEGLRVVDASIMPT
                     LTSGNTNAPVIMIGEKAADMILVDAN"
     gene            complement(4572..4703)
                     /locus_tag="QF359_12390"
     CDS             complement(4572..4703)
                     /locus_tag="QF359_12390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87752.1"
                     /translation="MKPLIQLHPEDNLVVALSAHEKGASIGEFGGSTNAEIPAGLQD"
     gene            complement(4863..6470)
                     /locus_tag="QF359_12395"
     CDS             complement(4863..6470)
                     /locus_tag="QF359_12395"
                     /inference="COORDINATES: protein motif:HMM:NF012935.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO87753.1"
                     /translation="MKSYDYIIVGAGSAGCVLANRLSEDPKIEVCLLEAGAPTHSPIF
                     SVPLGVMAALNHRTNWKFSTAPQAALKNREIYTPRGKTLGGTSMINGMVYLRGLPEDY
                     NEWSSLGNTGWSWDDVLPYFLKSENNENFRDDPLHNTDGLMSVRFLNKANPITERYLE
                     ASQSLQHKLVEDLNGADPNGVGYFQSTTTKGRRASTSRAFLKPARNRKNLTVLTRSPV
                     SRLIMEGNRATGVVVQSDGPEQKIHASREVILSAGSYLSPKILMLSGIGDRAELNAHS
                     IASTHHLPGVGKNLQDHPSCPFFYKSKSRVPYGISLPVLPRLLWNGIEYALRRQGLLA
                     SNIMECGGLFKTDPAKSRPDIQHIFMPGYRQPPPNMIGYGHGYSLNIILLRPESRGEV
                     RLAGSDPKLLPIIDPKHLENDADMETLATAYKKGRRILSNLAFDALQAEEVLPGPSVQ
                     SDEDLIDFIRGNAATIFHPVGTCKMGADDDSTAVLDPRLKVRGINGLRVADASIMPRI
                     IGGNTNAPTIMIAEKAADMIKQDAQAR"
BASE COUNT         1615 a         1731 c         1682 g         1665 t
ORIGIN      
        1 ataagctcca ttatagctaa tatttgctct ggttttaccc atttaggggg caattaccgg
       61 catctcagtt gagcttagga aacttcccga tgatattcga gagcggatcg ttaaactggc
      121 tatggatgaa cctgagctat caccacggga actggcggta cccttcaccg ataatgcgtc
      181 tcgccattta tatttacaaa gacctcgtca agataccact agaatggatg cctgctaatt
      241 tgcaagagtt tcgattattg ttggtgggtt gggtttatgg tcatgtatcc ggccttttga
      301 tgcaacacct ctggtcgctg gcctgataga attcgatacg atgggccaga tgctccttta
      361 aatcaaatga aagtctggac caaaaactct gatgacgggc acacctctag gaattcattt
      421 ggtcttctgt ctaccccatt tctatgttcc atgttgttgt atagtttctg gcacgggcgc
      481 ccatttgcta gggagcgttg gaaggtaatt taaaaacccg ccgcgcggtt ttagacagga
      541 cgtcagcacg ttgcgtcgga tcgagatcgt gaagcagggc agttgtgcct ttccaaatct
      601 ccgggtaatt accaccgagt aaaatgaccg gccaattgct ggctgccata attcgatctg
      661 cgccgaattt tgtcagaaca tgatccgtat agggacggag ttcctccgta ttccagcgcc
      721 acgaactaat tacgttcaaa ccaattgaaa gcttgatgct gatattctgg aatgccgccg
      781 cctcttctat cagggacgcc caagattccc acgagcgggt attcacgggc gggcacccca
      841 aatgatcgat aacgatttcg agagtgggac agcggtccgc aacggtcatc acggaacgca
      901 tttgtcgttc gttcaccggc acggtatcta acacgagatt ataatgatca acgatataaa
      961 tagcttcaag aacattcggc cgtaacaacc aggcttcatc ggtttcaaag ttgatcaggt
     1021 gacggattcc gacgaatttc gggagcttga ggtattgttc aattttttcc gatgcggctt
     1081 gcggatcgga aagaggtacc catcccacca ccccgaggat gctgtcgtct tcggccgcga
     1141 ggtcaagaaa ttcctcggtt tctgaactat cgttgacaga ctgtaccaga atgccgcctt
     1201 ccacgcccgc aagttggcac tcgtgacggt aatcattggg cacgaaatcg cggttaagaa
     1261 tgcagcccag ttcgggagac cattgatgcc gccccttggc catgcgccaa aaatgttgat
     1321 gcgcatcaat cattgtcata tcttgacgcc atcttgtact agtaccttag tttaatcgag
     1381 aagcaatgca tcctgccatc ggctacttct cgtccatcca gacggtgtcc gccgcatccg
     1441 tgttccctac tcctatataa cagaatacca attcggaatt ttcgtcctgc aacgcatttg
     1501 aaatgacgtg aatcgtgcct gcgggaatga acacgaagtc gccgggttca agcactaaat
     1561 ccttgcgatg gctcatgtcg ctgcgggcat accagaggtt aatttttccg gaaattatgt
     1621 gccaacaaac attgttattg gaatgataat gggtcggatc cggtgcggcc cccggcggaa
     1681 gcaccgtgcg ccccatgacc gcgttggcgt ccccgacggt ttcgtcattg ataccgaagc
     1741 cgatttgcaa cgggggctcg tattttacat ccgttccgat ctcgctcgga cgaatgatag
     1801 tcaccttttg ctgctccaaa ggaaacatct ttacctcctt ctgtttatct tgttgcaata
     1861 agaacacttc ttttattgag ggttctacaa atctattttc cggcccacac cggagccttt
     1921 ttcgcgaaaa atccttcgat gcccgtttta aaatcctcgc tgccataaca ctcacggatc
     1981 aggtcgtcgc cgtttggcag ggtagattca gttaatctgc caagggcttg cttcatcgta
     2041 cggagagtaa tcggggcgtt ctcgattacg cgggcacaga tttcagcagc tcggtcgccg
     2101 atattatccg cggggacaat ttcgcagagg aagcctgcga tttctgcctc ttctgcggtc
     2161 aacgtctccg aaagtaaaag cattttcttg acccgcgaaa ctccgaaagc attaaccagt
     2221 cgcgacaggt tttccatcga aaggcaattg ccaatggttc gcgcgatcgg cacaccgaac
     2281 tccgcgtctg gcgtggcgat tcggatatca caggccgtgg cgatcgccag gcctcctccc
     2341 accgcccagc cttcgatgat ggctaccgtc ggaataggaa ccgacagcag tcgtctgaaa
     2401 tagtcctcca tcttcttttc gtattcgata ccgtcttcgc cgtccgaaaa ttctcgaaac
     2461 tgggaaatat cggttccggc gacaaaagcc ttaccgccgg cgccgcgtaa agtgagtacc
     2521 ctgagatcag gagtagcgat gaccgtatcg catgcctggc tgagttcgtc gtacatcttc
     2581 caagtcatag catttcttgc ttgcggacgg tcaaaaagaa tatggccgat aaggccattc
     2641 tggacgaatg tcactgtacc ttcattcatt tttcaaatgc accctataag tcttcgatca
     2701 acggccttcg ttgattgatc cacatatagt tacattttca aattaatcaa caatatatgg
     2761 tataataagg caaatgtagc actaaattta gtgccgctaa aataaggacg gaacgacaac
     2821 ttacgtatat gctggcccat caattgggta ctagtggtta gatgattgaa attactggcg
     2881 taagggatac aatttgggaa ttcacttttc ggagcgataa aagcaaaaat aaaatataca
     2941 cctagacaga ggtctcaaaa gtagcttctc atgtctgata aaaacttgtt tgactacatc
     3001 atcatcggcg ctggtagtgc tggctgtgtc ctagctgatc gcctgtccgc ctccagccaa
     3061 catcgcgtat tactgctaga agccggtccc aaagatacca gcccctggat tcacatcccc
     3121 atcggctatg gcaagcactt caccaataaa gcgctgaatt ggatgtataa ctcggaggac
     3181 ggcccggact gggtgcagcg tccggtttat cagccacgcg gtaaagtgct tggcggttcc
     3241 agctcgatca acggtctcgt ctatatgcgt ggcaacaaga ccgactatga ccattggcgg
     3301 caattgggaa ataccggatg gagctatgat gatgtgttgc cctattttcg aaaatcggaa
     3361 gatcagcagc gcggcgaaaa cgactatcac ggcgtcggtg gaccgcttgc tgtttcgaac
     3421 ccgcgcgaca aacaccccct tgctgaagcc tatatcgagg cggcggtctc acttggttac
     3481 tcgtataatg aagatttcaa cggcgccgaa caggagggct ttgggccgac ccaatggaac
     3541 acccgcaacg ggcggcgctg cagtacatcg gtcgctttcc taaaaccggc gcacaaacgc
     3601 aaaaacctaa ccgtcatttc tgaagcactg acaagcaggc tattgttcaa gggcaagaaa
     3661 gcaactggcg tcgaatatct ccgtggcaac cagattcaga cagcacgcac acaaggggaa
     3721 gtcattgtcg ccggcggtgc ctttaattct ccccagctgc ttcagctctc cggtgtcgga
     3781 ccgggcgaat tattgcaaag cctcggcatt gatgtcgtcc acgacatgcc gggtgtcggt
     3841 gaaaatctgc aagaccatta caacggccca atattttatc gcagcaaaga gccatttacc
     3901 gccaatgaca tcgtcaataa tttcggcacg aaaatgctgg ctggcgtgaa ttatgtgttc
     3961 cgccgccggg gcttgctaga aatgggctcc gtctatggtt gcggtttcct ctatgtcgat
     4021 aaggaagcag tcgcccccga catccaggcc ttgctgatgt tgttcagtgg cgagcaagtc
     4081 ggtggcccac cgcatccctt ctcgggtttt tccgcggtcg cagccttgac ccgtccggaa
     4141 agccggggca cggtcatgat cacctcaaga gacccgcatt ccgcacccgc cattcaacca
     4201 aattacctag atgcggagaa agaccggaca acgctgatcg gcggcatgcg ggccatgcgc
     4261 gaaattttag cacaaccagt catcgccaaa tacatcgaag ccgaacacga acccggcccg
     4321 ggcgtcaaca gcgatgaagc cctgctcaaa tatatccggg aacgcggccg caccagctat
     4381 cacccggtcg gcacctgccg tatgggcagc gatgacaaag cggttgttga tccaagattg
     4441 agagtgcacg gtatggaggg cttgcgcgtt gtcgacgcct caatcatgcc gaccctgaca
     4501 tcgggcaata ccaacgcacc ggtgattatg atcggggaaa aagccgccga tatgatcctg
     4561 gtggacgcga attaatcttg caggccggct ggtatctcgg catttgtcga accgccaaat
     4621 tcgccaatgc tggcgccttt ctcgtgggca cttagggcaa caacgaggtt gtcctcggga
     4681 tggagttgga taagtggctt catgacggat ctcctcaaaa aaaatttagt gataatatcc
     4741 attaggtggt gcaagcgctg ttgtctaatg cgaacccaaa ccacaaagtt tccagtgttt
     4801 ttcatgttta acaggcatgt tgccgggtac tcaccacttt attgatccgt tcatattctc
     4861 tcttatctag cttgggcgtc ctgtttaatc atatcggcgg ctttttccgc aatcataatg
     4921 gttggggcgt tggtattgcc gccaatgata cgcggcataa tcgacgcatc cgccacccgc
     4981 aatccgttaa tgccccggac tttaagccgg gggtcaagaa cagcagtgct gtcgtcatcg
     5041 gctcccattt tgcaggtgcc gacagggtga aaaatcgttg ccgcattgcc ccgaataaag
     5101 tcgatcagat cttcatcgga ttgtaccgaa ggtccaggga gtacttcctc agcttgtagg
     5161 gcatcaaaag ccaagttact aagaatacgc cgcccttttt tataggcagt ggcaagtgtt
     5221 tccatatcgg cgtcattttc caaatgttta gggtctatta tcggcaacag tttgggatcg
     5281 gaacctgcca gacgcacctc gccccggctt tccgggcgga gcaggatgat gttcagcgaa
     5341 taaccgtgac catagccgat catatttggc ggtggctggc ggtagccagg cataaagatg
     5401 tgttgaatat ccggccggct tttggccgga tcggttttaa ataagccgcc gcattccata
     5461 atgttactgg ccagcaatcc ttgtctgcgt aatgcatatt caatgccgtt ccagagaagt
     5521 ctgggaagga ccggcaggga aatgccgtag ggcactcggc tttttgattt atagaagaac
     5581 gggcatgagg ggtgatcctg caagtttttg ccaacacccg gcaggtgatg cgttgaagcg
     5641 atgctgtgtg cgttgagctc ggcacggtca ccgatgccgg acagcatcag gatttttggg
     5701 cttaaatagc ttcccgccga caatatgact tcacgacttg catggatttt ctgttctggt
     5761 ccatcggact ggacgactac accggtagcc ctgtttcctt ccatgatcag ccttgaaacc
     5821 ggtgagcggg tcaaaacggt caaattctta cgattgcgcg ccggtttcag aaaggcccgg
     5881 ctggtagatg cccgccggcc tttggtcgtt gttgattgaa aatagcctac tccattggga
     5941 tccgcaccat tgaggtcctc gaccagcttg tgttgcagag actgggaggc ttctaaatat
     6001 ctctccgtga tcggattggc tttattgaga aaccgcacac tcattaaacc gtccgtgttg
     6061 tgtaaggggt catcgcgaaa gttttcgtta ttttcagact tcaggaaata cggcaacacg
     6121 tcgtcccatg accacccagt gtttccgagg ctggaccatt cattgtaatc ttccggcagg
     6181 ccgcgcagat aaaccatgcc attgatcatg ctggtaccgc cgagcgtctt gccgcgcgga
     6241 gtatagattt cccgattttt tagagcggcc tgaggcgcag ttgaaaattt ccagtttgtg
     6301 cgatgattta aggccgccat aacgcccaaa ggtacgctga agatcggact atgagtcggt
     6361 gcgccggctt ccagcaggca cacttcaatt tttgggtctt cgcttaatcg gttggccaga
     6421 acgcaacctg cggagcccgc gccgacaatg atataatcgt atgatttcaa gagataattc
     6481 ctgttgctaa cggtatttag ttttaattat agcgcctttc tccacttaat ctagatcagc
     6541 acggcgaggt tgaaacagca ccggcagcat ataggcagag cccagtgcgc cgagccaagc
     6601 cggtgagtgg gtaagctcaa acatcaacca gccggaggca attttataaa tccaaaagcc
     6661 ctggaccatc accacttgac cggtccagta gac
//
LOCUS       DASCNL010000945         1742 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001937446, whole genome shotgun sequence.
ACCESSION   DASCNL010000945 DASCNL010000000
VERSION     DASCNL010000945.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001937446"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..352)
                     /locus_tag="QF359_12400"
     CDS             complement(<1..352)
                     /locus_tag="QF359_12400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87754.1"
                     /translation="MPQVIQPRGRTVKSEYPLVFDIQNSRNASPTLLVFVNRDDSPVL
                     HGKGRLIEPYELPLAWSDPGFTVAEPDAHMRDKAPLQYQIKTHLRTAGPANNKELAKV
                     FGKSEPGIANATRKL"
     gene            complement(1022..1213)
                     /locus_tag="QF359_12405"
     CDS             complement(1022..1213)
                     /locus_tag="QF359_12405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018053273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87755.1"
                     /translation="MATYECSVCGMAVNATCAKCDEPLVNDMLTLDNGNEVQISKCPN
                     DHGKIKSPLCCGQDMACTA"
BASE COUNT          398 a          457 c          460 g          427 t
ORIGIN      
        1 tcaacttgcg tgtcgcgtta gcgatgccag gctcgctttt gccaaaaact tttgccaact
       61 ccttgttgtt cgccggtccg gcagtgcgca ggtgtgtctt gatctggtat tgcaacggcg
      121 ccttatcgcg catgtgcgcg tctggttcag cgaccgtgaa acccgggtca gaccaggcga
      181 gcggcaactc gtacggctcg atcaaccgcc ccttgccatg taacaccgga ctgtcgtcgc
      241 gattgacgaa aaccagcagg gttgggctcg cattccggga attctggatg tcgaatacga
      301 ggggatactc ggatttgacg gttcggcctc gtggctggat aacctgcggc attttgtgtc
      361 gcggcgactt tacacatgcc gttcaacgcg ctcgattttc aaggaccacg gcatggactg
      421 gaataacgcg ggccgtaatg cctactacac aagctttgaa tgggctggac cgtaatcgag
      481 ataataacga tcaagcgtta atctttgggc agctgcgctg ttatgcgaat agcgtgcgca
      541 aaatctaagc ggcactctct acacataccc gccttgctcg cggacccgta caagatatga
      601 tgcaagaaga gtgagccagc ctaatttccg gtcgatcgct cacttgagga ttagctaaaa
      661 atgccaatcc tatcgatgat tgcgtcataa actctcccac aaactaacca ccccgtcccg
      721 tcggcgcagc ctgaccagac ttcagattgc agcgggggaa gttaatctca gccgtatcta
      781 ttatttccaa tgtcaacaac aaggggcaca aggatttcca ccatgtgccg gcgactggcc
      841 gcgactgaac cgcgactgaa ttgaaatgat cttggccctg tattcgtctt cagtagcgac
      901 ggcatcgata gcgcagcggc cacctgtgcc ccagaggcgt ctatgacaac cggcaattag
      961 tggcatccga ccagccgaca gccgctcttt ttcttggtcc aacgtggacg gcatttatta
     1021 gttaggcggt gcaggccata tcttggccac aacatagcgg agacttaatt ttgccgtggt
     1081 cgttggggca ttttgatatc tgtacttcgt tgccattgtc caatgtcaac atgtcgttga
     1141 ctaagggttc gtcacatttg gcacaggtcg cgtttaccgc cattccacac accgaacatt
     1201 cgtaggtagc cattctacaa ctccgcaatt attttataat tcatgagtag ttcttctagc
     1261 acggtaccca gggtatcaac catcctccac gtagccccca cctggctggc cgccagatgg
     1321 gcgcgaccat attatgcttt ttggcggcgt ttcggggctt ctggtcgtag ccctggcggc
     1381 actaggtctt ggtagtcgcg ctggttctat tctgtgtact gcattgagtt ttaaagtaga
     1441 atcgtggtgc cgccacatca aaaatcggat ttacatggac aatggaggtt aagaaaacac
     1501 catttaatca ggcgcttgct ccaggcgaaa tcaaatcggt tgcggtcaag gcttatcggc
     1561 tccggttgtg tggtcaagca aaatcatcgg aaacgtcatc atccgcttaa ccgttgacaa
     1621 catccacttg aacgacaaga ctaatcgaaa gcataataaa gctatgcggg caggaggtga
     1681 cttggatggg ttctcccgaa gcgcggagag gccgccgaag cggtcgtggt gtggggtgat
     1741 gg
//
LOCUS       DASCNL010000946         4443 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001945860, whole genome shotgun sequence.
ACCESSION   DASCNL010000946 DASCNL010000000
VERSION     DASCNL010000946.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4443)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4443)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4443
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001945860"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(133..552)
                     /locus_tag="QF359_12410"
     CDS             complement(133..552)
                     /locus_tag="QF359_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HJO87756.1"
                     /translation="MPSLKGTNTEQNLKDAFAGESQANRRYLYFAQKADVEGYNDVST
                     VFRSTAEGETGHAHGHLEYLEETGDPATGEPIGTTAQNLVAAVAGETHEYTDMYPGMA
                     KTAREEGFDEIADWFETLAKAEKSHAGRFQKALDSLD"
     gene            complement(739..1155)
                     /locus_tag="QF359_12415"
     CDS             complement(739..1155)
                     /locus_tag="QF359_12415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HJO87757.1"
                     /translation="MNKVRPFSHALDRLRNAGLRPTRQRLALAKLLFDNHDRHITAEI
                     LHGEALDANVRVSLATVYNTLHQFNEAGLLREIVVDSGRSYFDTNVSNHHHIFNEDSR
                     ELMDIEDGQIGLAGLPAIGAGQEISRIDVIVRVINI"
     gene            complement(1257..2057)
                     /locus_tag="QF359_12420"
     CDS             complement(1257..2057)
                     /locus_tag="QF359_12420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HJO87758.1"
                     /translation="MTNSNGIMTGKRGLVMGVANERSIAWGIAKTLADEGAKLTFTYQ
                     GEAFEKRLVPLAESIGSSIVQQCDVEAEGSLQAVFDRLATEWGALDFIVHSLAYSDKK
                     ELNGRYVDTTAENFVRTMNISCFSFTAVAQAAYPLMKKTGGSMITLTYYGAERVLPNY
                     NVMGVAKAALEASVRYLAADLGPDGIRVNAVSAGPMRTLAGSAIGGARKIYNMSEANA
                     PLRRSVTLEQLGGTALYLLSDLGSGVTGETHHVDSGYNIVGMPYLSGE"
     gene            complement(2071..3294)
                     /gene="fabB"
                     /locus_tag="QF359_12425"
     CDS             complement(2071..3294)
                     /gene="fabB"
                     /locus_tag="QF359_12425"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015087822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HJO87759.1"
                     /translation="MRRAVITGIGIVSCIGNDKATVLESLRNSKSGISFSEEFAEMGF
                     RSQVYGRPDIVVTELVNRRVLRFMGEGAAYNYIAMEQAIEDSGLSEDDVSNERTGIIM
                     GSGGPSVKNLIEAADTTRERGPKKVGPFMVPRTMSSTNSATLATPFKIKGVNYSITSA
                     CSTSAHCIGNAAELIQWGKQDIVFAGGGEELNWGMSVMFDAMPALSSGYNDTPEKASR
                     AFDANRDGFVIAGGGGVVVVEEYEHAKARGTKIYGEVTGYGATSDGYDMVQPSGEGAV
                     RCMNQALSTVDLPVDYINTHGTSTPVGDVKELAAIRETFSDRNSIPYFNSTKSLTGHS
                     LGATGVQESIYSLLMMDNNFICASANIEELEPEVGDMPIVQERMDDVEINCIMSNSFG
                     FGGTNACLVFTRPDA"
     gene            complement(3324..3875)
                     /gene="fabA"
                     /locus_tag="QF359_12430"
     CDS             complement(3324..3875)
                     /gene="fabA"
                     /locus_tag="QF359_12430"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HJO87760.1"
                     /translation="MSSVAENMMVDEHSFVPQNNYSYDELITCGKGELFGPGNAQLPL
                     PPMLMFDRITSITADGGAFGKGEIFAELDIKPDLWFFPCHFESDPVMPGCLGLDALWQ
                     LAGFYIGWTGAPGRGRAFGAGEIKFTGMVTPAAKLVSYHIDIKRVVNRQVALAFADGQ
                     MAIDGETVYETKGLRVGTIPADA"
     gene            complement(4139..>4443)
                     /locus_tag="QF359_12435"
     CDS             complement(4139..>4443)
                     /locus_tag="QF359_12435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HJO87761.1"
                     /translation="QASEGAIGMIKAITAEPEVGVIYTGKVVKTVDFGAFVNFMGARD
                     GLVHISELRPERVEKTTDIVNIGDEVKVKLIGIDNRGKVKLSMKSVDQESGEEIAG"
BASE COUNT         1171 a         1148 c          976 g         1148 t
ORIGIN      
        1 gggcttctag gttaccttca gacatgcgaa aaccgtaaaa ttttttaaac ttgaaataaa
       61 taaattaagg gacccgggcc cggatccctt aattcatatt aacctgcttg gtcgaaatga
      121 cctgcattct aattagtcga gcgaatccaa agctttctgg aagcgtccgg cgtgagactt
      181 ttcggccttc gccaaggtct caaaccagtc ggcaatttca tcgaaaccct cttcacgggc
      241 tgtttttgcc ataccgggat acatgtcggt gtattcatgg gtttcaccgg caacggcggc
      301 aaccaaattt tgggcggtcg tgccaatcgg ctctccagtg gccggatcac cagtttcttc
      361 cagatattcc aaatggccgt gcgcatgacc ggtttcgcct tcggcggtgg acctgaatac
      421 ggttgaaacg tcgttatatc cttcaacatc cgctttttgc gcgaaataga ggtagcgacg
      481 attggcttgt gattcgccgg caaaagcgtc tttcaaattc tgttctgtgt tggttccttt
      541 aagtgaaggc attgatcccc tccctccttt attgagttaa ataattataa gtgtccccaa
      601 ttccgttatg ctcctcagtc aattcagagg ggcgacgacc ggtatctttc gattatacta
      661 tgcggataaa aaatagagtc aaccaaattt ttgaattatt caaaaaaatg ttataactct
      721 atgttttttt gatatattct atatatttat tacgcgcacg ataacgtcga tacggcttat
      781 ttcctgtcct gcgccaatgg ccggcaagcc tgccaagcca atttgaccat cttcaatatc
      841 catcaattcg cggctatctt cgttaaagat atgatggtga ttggaaacat tggtatcaaa
      901 atagctgcgt cctgaatcaa ccacaatctc acgcaacaac ccggcctcat taaactggtg
      961 taaggtattg taaaccgttg ctaaagaaac ccggacattg gcgtcgaggg cctcgccatg
     1021 caggatttca gctgtgatgt ggcgatcatg attatcaaac aataattttg ccaaagcgag
     1081 gcgttggcgg gttggccgca atccggcatt ccgcagacgg tccaaggcat ggctgaatgg
     1141 gcgtacttta ttcataagat ttaccaacct tatagttttg attaattata aataaggaat
     1201 aaccataaat aaatcaaggt taattttgat aattttgaat tattcgaagt tcagagttac
     1261 tcacctgata aataaggcat accaacaatg ttgtagccgg aatcaacatg atgggtctca
     1321 ccggtgactc cactgcccaa atcactgagt aaataaagcg cggtgccgcc aagttgctct
     1381 agtgtaaccg aacgcctgag cggcgcatta gcttcgctca tattataaat cttacgcgct
     1441 ccgccgatgg cgctgccggc caaagtgcgc attggtccgg cggagacggc gttgacgcga
     1501 atgccatccg gccccaaatc cgcggccaga taacgcacac tcgcctcaag tgctgctttg
     1561 gcaaccccca tgacattgta atttggcaag acacgttcgg caccgtaata ggtcaaggta
     1621 atcatgctgc cgccggtctt tttcatcaac ggataggctg cctgggccac ggcagtaaat
     1681 gaaaagcacg aaatgttcat ggtgcggaca aagttttccg ctgtcgtatc aacatagcgg
     1741 ccatttagct cttttttatc cgaataggcc aaggaatgga caataaaatc aagcgccccc
     1801 cattctgtcg ccagtcgatc aaagacggct tgcaggctcc cctctgcttc gacgtcacat
     1861 tgctggacga tacttgagcc aatgctttca gccagtggca ccaaacgttt ttcaaaggcc
     1921 tcaccctgat aagtgaaggt gagcttggct ccctcgtcag ccaaagtttt ggcaatgccc
     1981 caggcaatcg agcgttcgtt ggcgacaccc atcaccaagc cgcgctttcc agtcatgata
     2041 ccgtttgaat ttgtcatgaa aaaaataatt ttatgcgtca gggcgggtaa aaacaagaca
     2101 cgcattggtg ccgccaaagc caaagctatt ggacattatg caattgattt caacatcatc
     2161 catacgttcc tgaacaatcg gcatgtcacc aacttccggt tccagttctt caatattggc
     2221 ggaggcgcag atgaaattgt tgtccatcat cagcagggaa taaattgatt cctgcacccc
     2281 agtcgcgccc aaagaatgtc cggtcaggga tttggtcgaa ttaaaatagg ggatgctatt
     2341 acgatcacta aaagtttccc ggattgcagc caattcctta acgtcaccaa ccggcgtcga
     2401 ggtgccatgg gtattaatat aatccaccgg cagatcaacc gtcgacaagg cttggttcat
     2461 gcagcggacc gcaccttcgc cggaaggctg taccatatcg tagccatcag aggtcgcacc
     2521 gtagccggtt acctcaccat agatttttgt gccgcgtgcc ttggcgtgtt catattcttc
     2581 aactaccacg acaccgccac cgccggcgat aacaaaacca tcccgattgg catcaaaggc
     2641 ccgggaagct ttttctggtg tgtcgttata gcccgaagac aaagcaggca tcgcgtcaaa
     2701 catcacggac atgccccagt tgagctcttc accgccaccg gcaaagacaa tatcctgctt
     2761 accccactgg atgagttccg cggcattacc gatgcaatgc gccgaggttg agcaagcaga
     2821 ggtgatcgaa taattgacgc ctttgatttt aaatggtgtt gccagcgttg ctgaattagt
     2881 cgaagacatg gtccgcggaa ccataaacgg accaactttt ttaggccctc tttcccgcgt
     2941 tgtgtcagcg gcttcaatca agtttttaac ggaagggcca ccagaaccca taataattcc
     3001 ggtacgttca ttagagacat catcttcgct gaggccagaa tcttcaatcg cttgttccat
     3061 ggcaatgtaa ttataggctg ccccctcgcc cataaagcgg agcactcggc ggttaacgag
     3121 ttcagtcaca acaatgtcgg gcctgccgta aacctggctg cgaaagccca tttccgcaaa
     3181 ttcctcggaa aaactaatac ccgatttgct gttgcgcaaa gattcaagaa ctgttgcttt
     3241 atcgttgcca atacaggaaa caataccaat gccggtgata actgctcttc tcacgatacc
     3301 ctctttacct aattcaactt aaatcatgca tccgctggaa tggtgccgac acgaagacct
     3361 tttgtttcat agacagtttc accatcaatc gccatctgtc catcggcaaa agccaaggca
     3421 acttgacgat taacgacccg cttaatatcg atatgatagg acaccagctt ggctgccggc
     3481 gtgaccatgc cggtaaattt tatttcgccg gccccaaagg cccggcctct tcctggtgcg
     3541 ccagtccagc caatataaaa accggctaac tgccatagag catctaggcc aaggcaaccc
     3601 ggcatcaccg gatcactttc aaagtgacag gggaaaaacc agaggtcggg cttgatatca
     3661 agttcggcga atatttcgcc tttgccaaag gcgccgccat cggcggtgat cgaagtgatg
     3721 cgatcaaaca tcagcattgg tggcaaggga agctgggcgt tacccgggcc aaataactcg
     3781 cctttcccgc aagtgattag ctcatcatag gaatagttgt tctgcggaac gaatgagtgc
     3841 tcgtcaacca tcatgttctc tgctactgaa ctcatggccc cagatactgc cggtgtggtc
     3901 atggcccaat cccttctatc cttaaaatta catcctatac tttcaataga gaaaggcccg
     3961 gatttaatgc tttgccgctc tcaattgcga ccagtctaat ccgcgccact aatctatcgc
     4021 ctgcttacct attacataat tacatatatg tagtgatttt ggaaaagacg actcattagg
     4081 tgaaaaaagt aatatttttt taccgcctaa tgagccttgc ttttagaata accgggaatt
     4141 aaccggctat ttcttcaccg ctttcctgat ctaccgattt catcgaaagt ttaactttac
     4201 cacgattatc gatgccgatc agtttaacct taacttcatc gccaatatta acaatgtcgg
     4261 tggttttttc gacccgctca ggacgtaatt cactgatgtg aaccaggcca tcccgggcac
     4321 ccatgaagtt gacaaaagca ccaaaatcaa ccgtcttgac gactttaccg gtataaatca
     4381 caccaacttc cggctcagcc gtaatcgcct tgatcatacc gatggcgcct tccgaagcct
     4441 gct
//
LOCUS       DASCNL010000947         4689 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001946477, whole genome shotgun sequence.
ACCESSION   DASCNL010000947 DASCNL010000000
VERSION     DASCNL010000947.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4689)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4689)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4689
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001946477"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(68..475)
                     /locus_tag="QF359_12440"
     CDS             complement(68..475)
                     /locus_tag="QF359_12440"
                     /inference="COORDINATES: protein motif:HMM:NF039194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5681 domain-containing protein"
                     /protein_id="HJO87762.1"
                     /translation="MSKKQLVPTDKYDIGYGKPPKVTQFSKGQSGNPLGRPKGAKTKQ
                     SKARDIRLNNMIIEEAYRSVAVQEDGGMISMTMMQAVLRSVTVNAAKGDHRSQKLLMD
                     MIRIVEATKDEQKESEEEIQINIVLRETISAPD"
     gene            complement(472..1776)
                     /locus_tag="QF359_12445"
     CDS             complement(472..1776)
                     /locus_tag="QF359_12445"
                     /inference="COORDINATES: protein motif:HMM:NF013704.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HJO87763.1"
                     /translation="MSDTLEHHAPNALKPWANNARTHSKKQLRQIADSIEEFGFTNPV
                     LIDQDYTILAGHGRVEAAKQLKMETVPCLRQDQMTEEQKRAYVLADNKLAENAGWDEE
                     LLSIEFGALHELDLDFSLDITGFSIAEVDNLIDGTSIEEPGDPADDILPDANVPARCK
                     TGDLWQLGKHRLICGDSLDPQTISRLMDGEQARMVFTDPPYNVPIDGHVGNSGKIQHR
                     EFAMASGEMSQDEFKDFLQKAFTNMADNSLDGSIHYICMDWRHMQEVMDAGNNIYDEF
                     KNLIVWVKDNGGMGTFYRSRHEMIFAFKKGTASHINTFELGQHGRYRTNVWEYKGVNT
                     MRAGRMEELALHPTVKPVQMIADAIKDVSGRGDIVLDLFGGSGSTLIAAHKTGRRGYL
                     CELDPIYCDRIIARWEMFAHDDAVKIEEVVIEAEIAPREAVQ"
     gene            2238..2654
                     /locus_tag="QF359_12450"
     CDS             2238..2654
                     /locus_tag="QF359_12450"
                     /inference="COORDINATES: protein motif:HMM:NF022598.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2924 domain-containing protein"
                     /protein_id="HJO87764.1"
                     /translation="MTNIGVEQIEQMERGALITLWQELIDKPLPRHMSIVFLRQVLAF
                     EVQSKQNGGLPRGFIKLLNKQADGSKPKRSKTEPKPGGRMLREWNGITHVVDIADGHY
                     VWKGENYRSLSAIARTITGAHWSGPRFFRLNKKEIQ"
     gene            2651..4327
                     /locus_tag="QF359_12455"
     CDS             2651..4327
                     /locus_tag="QF359_12455"
                     /inference="COORDINATES: protein motif:HMM:NF012464.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HJO87765.1"
                     /translation="MTKPSIRCAIYTRKSSDEGLDQEFNSLDAQYEACANYIASQRHE
                     GWKMVKERYDDGGISGGTLERPSLECLLADIDAGRIQMIVVYKIDRLTRSLADFAKLV
                     ERLEASSCSFVSVTQAFNTSSSMGRLTLNVLLSFAQFEREVTAERIQDKIAASKKKGL
                     WMGGVCPLGYDKDPDPQSRTLVVNHEEADRVRTLFELYDQFGCLRTVEEETVKLNLRS
                     KLQVFKTGRVAGGKPFSRGQIYHILRNPIYLGLIRHKDKTWPGQHKAIIDEELWDRVQ
                     ERLIAASRRKRGEAQSKDGSGQTKGQTLLTGKLFDETGDRLTPTSTTRRGRKLRYYVS
                     NRLIAGGTDPSGWRLSAPNLEKQIATILADHIEAQANNYTLTKSPDAHQAKPPQKCAA
                     TIITTLRSNGLGQYNDLIDSLRLHPKILRVKLDTKGLAKLLSINIEDLSEELIDFELP
                     WQKKRRGVENKLIIGDPAPEPDLILIRMLARAHQWVQEMKDGIPLKQIANNLGVTPAY
                     IRTRSKLFFLSPQIQTAIVKGTLSPEFTTNQILSMKIPRDWQLQNTLFGV"
BASE COUNT         1271 a         1150 c         1063 g         1205 t
ORIGIN      
        1 ctccgatcaa tttaattatt ggttcttttt aaactgttcg tcggcacgaa gaggatatct
       61 tttcatttta gtctggagcg ctgatcgttt ccctcaagac aatattgatt tgaatttctt
      121 cctcactttc tttctgctca tcttttgttg cctcaacaat gcggatcata tccatcaata
      181 gcttttgaga tcggtgatct cctttagccg cattaacagt taccgagcgg agtacagctt
      241 gcatcatcgt catagaaatc atgccaccgt cctcttgaac ggcaacggag cggtaggctt
      301 cttcgataat catattattg aggcgtatat cgcgcgcctt tgactgtttt gttttagccc
      361 cttttggccg cccaagagga ttacccgatt gccctttgct aaattgcgta actttcggcg
      421 gcttgccata accaatatcg tatttatctg tcggcacaag ttgcttcttg ctcattggac
      481 ggcctccctt ggtgcaattt ctgcctcaat gacaacctct tcaattttca cggcgtcatc
      541 atgagcgaac atctcccacc tagcgataat ccggtcgcaa taaattgggt ccaactcaca
      601 tagataaccc cgccgcccag ttttatgggc tgcaatcagg gtagaaccag atccaccaaa
      661 gagatccaag acaatatcac cgcggccaga aacatccttg atggcatcgg ctatcatctg
      721 aaccggtttg acggttgggt gaagagcaag ctcctccatg cgccctgccc gcatggtatt
      781 tacacctttg tattcccata cattggtgcg atagcgccca tgctggccga gctcaaatgt
      841 attgatgtgg gaggccgttc ctttcttgaa tgcaaagatc atctcatgac gggagcgata
      901 gaaggtgccc atgccaccat tgtctttaac ccagacgatc aagttcttga actcatcata
      961 gatgttattg ccagcatcca tcacttcctg catatgccgc cagtccatac atatatagtg
     1021 aatggagcca tccaggctgt tatcagccat attggtgaag gccttttgca ggaagtcttt
     1081 aaactcatcc tggctcatct ctcctgatgc catagcgaac tcccggtgtt ggatctttcc
     1141 agagttccca acatgaccat cgatcggcac attgtaaggc ggatcggtaa ataccatccg
     1201 agcttgttct ccatccatga gacggctgat tgtttgcggg tcaagcgaat caccgcagat
     1261 caaccgatgc tttccaagct gccaaagatc acctgttttg caacgagctg gaacattggc
     1321 atcgggcaaa atatcatcag ctggatcacc cggttcctca attgaagtcc cgtcgatcaa
     1381 gttatcaacc tcggcgatgg aaaacccggt aatatccaaa ctgaagtcga gatccagttc
     1441 atgcagagcg ccgaactcaa tggacaagag ctcttcatcc cagcccgcgt tctcagcaag
     1501 cttattgtcg gctaatacat acgcccgctt ttgctcctca gtcatctggt cttggcgaag
     1561 gcagggcacg gtctccattt tgagttgctt ggcagcttca actcgcccgt gaccggcaag
     1621 gatcgtataa tcttggtcaa tgagaacggg attggtgaag ccaaactctt caatgctatc
     1681 ggcgatttga cgaagctgct ttttagaatg ggtccgggca ttgttggccc agggtttaag
     1741 tgcattaggg gcgtggtgtt ctagggtatc tgacatatca tcagtccttt attcagcatt
     1801 accgctcgca aatgcgagca ttaaagcagg acgtcaatca acgcgcgcaa cccaaagggt
     1861 tgccctgcct acgataaatg cgtcttcctt tcggagggga cggatgcaaa cttttcagtg
     1921 aatgccagaa agtttattct aaacggggat gtttgccctt agggtcaaag tcccgccgaa
     1981 ctccattata gcttgttcag ctaaactatt tgccaattgt gcattgccga ttgttgaact
     2041 cctatagagc tcccgaggac gtactccagt gaggcgtatt catacaagtg ccttagcaac
     2101 tataattata cgatatatgg ttaataattg caagcatata acaacatata gtagcccctt
     2161 atatacgaca ctccactgga cttcggtgcc aaagagagcg tcactggctg atattttaca
     2221 gtcaccagga gccagacatg accaatatag gcgttgaaca aatcgaacag atggagcgag
     2281 gggcactgat cacgctttgg caggagttaa tagataaacc tctgccaagg catatgagca
     2341 tcgtctttct ccgccaagtt ttggcatttg aagttcagag caaacagaac ggcggcttac
     2401 cgcgtggatt tattaagctg ctcaacaagc aagcagacgg atccaaaccc aaacgatcga
     2461 agactgaacc caagcccggc ggcagaatgt taagagaatg gaacgggatt acccatgtgg
     2521 ttgatatcgc cgacggtcat tatgtttgga agggagagaa ctatagatcg ctgtctgcaa
     2581 tcgcccgaac cataaccggg gcgcattggt cggggccccg gttctttaga ttgaacaaga
     2641 aagagatcca atgaccaaac cgtctatacg ctgcgcgatc tatacccgca aatcatctga
     2701 tgaaggattg gatcaggagt tcaattccct agatgctcaa tatgaggctt gcgctaatta
     2761 tatagcgagc cagcgtcatg aaggctggaa gatggtaaag gagcgctatg atgacggcgg
     2821 catctccggt ggcacattag agcgcccctc tttggaatgc ctgctcgccg atattgatgc
     2881 cgggcgcatc cagatgattg ttgtctataa gatcgatcgc cttacccgct ctcttgctga
     2941 ctttgctaaa ttggtcgaac gccttgaggc atctagctgt tcttttgtct ccgtcactca
     3001 agcctttaat acatcctcgt ccatgggccg gctgacactc aatgtactat tgtcctttgc
     3061 gcagtttgaa cgtgaagtca ccgccgaacg tattcaggat aaaattgctg cttccaagaa
     3121 gaaaggatta tggatgggag gtgtttgtcc gttgggttat gacaaagatc ctgatcctca
     3181 atctcgcacc ctggttgtta atcatgagga agcagatcgg gttagaacat tgtttgagct
     3241 ttatgatcaa tttggttgtc tgcgaaccgt tgaagaagaa accgttaaac taaatttacg
     3301 ctccaaactt caagtcttca aaacaggcag agtggccggc ggcaaaccgt tctcgagggg
     3361 acagatctat cacatattac gcaatcccat ttaccttggt ctgatccgcc acaaagacaa
     3421 aacctggccc ggccaacaca aagccattat tgatgaagag ctttgggatc gtgtgcagga
     3481 aagactcatt gcggctagcc gccgcaaacg cggtgaggca caatccaaag acgggtctgg
     3541 ccaaacgaaa ggacagaccc ttctgaccgg caaactcttt gatgaaaccg gtgatcgact
     3601 gactccaaca tccaccactc gaagggggcg taagttgaga tattatgtct ctaaccgtct
     3661 cattgccggc ggcaccgatc catcgggctg gcggttatca gctccaaatc tggaaaagca
     3721 aatcgcaacc atccttgctg atcatattga agcgcaggcg aacaattata cactcactaa
     3781 atcaccagac gcgcaccaag ccaagccgcc acaaaaatgc gcagcgacca taatcactac
     3841 tctgcgatcg aatggcctgg gtcaatataa tgacctgatt gatagccttc ggctgcatcc
     3901 caaaatcttg cgggttaaac ttgatacaaa gggattggca aaattgctta gtatcaacat
     3961 agaagaccta tctgaagagc tcattgattt tgaattaccc tggcagaaga aaaggcgcgg
     4021 cgttgaaaat aagttgatca tcggcgatcc agcgcccgag cctgatttaa ttttaatccg
     4081 catgttggct agagcccatc agtgggttca agaaatgaag gatggaatcc ctttaaagca
     4141 aattgcaaat aacctaggtg ttacgcctgc ttatattcga acgcgatcaa aattgttttt
     4201 cctctctccc caaatacaaa ctgctattgt caaagggacg ctatcaccgg agttcactac
     4261 gaaccaaatt ttgagcatga aaatacctcg agattggcag cttcaaaata ccctgttcgg
     4321 ggtataaatc ttccctgtta gctaaattta attccctgat atagattttc aattccctgt
     4381 taaaaaaata acagggaatt gcccgataac ccgttgatat atctcctgaa aacaggctga
     4441 aaatcgcctt ttattgccga ttatgatcca aaaacgacaa ttttccctgt aaattccctg
     4501 ttaatcaggg aaacaggcca aagggaactg cctaaaaacc cgaactgaga ctaatgagaa
     4561 taagccggcc attatcaaat gatgatgcgt ctcaggttca attgcgaaac gctaagtgcc
     4621 cggaaaataa aacgaaatac agggaataaa actgagcaaa cccaagccaa gggttgctgg
     4681 cggagaggg
//
LOCUS       DASCNL010000948         1741 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001946964, whole genome shotgun sequence.
ACCESSION   DASCNL010000948 DASCNL010000000
VERSION     DASCNL010000948.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001946964"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1061)
                     /locus_tag="QF359_12460"
     CDS             complement(<1..1061)
                     /locus_tag="QF359_12460"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate TRAP transporter
                     substrate-binding protein"
                     /protein_id="HJO87766.1"
                     /translation="MKLDTKVNWLVSRLARRVTMSLIVALGLMAVPQPGLAAETVKMT
                     IVAGHPPVLLWVKHFRDTLIPTANSELAKSGKYKIQWTQAYAGTLAKVGEELETIQQG
                     LADIGGAWNLFDPAKLPLQNVGYMSPFNEASPETVTEIVEGLQKKIPAFGAQWTKYNQ
                     VYLGGGIAADSYHLWSNYPIKKLADLKGHKFGAPGPAVNWFKGTGGVGVSANLTLYFN
                     DIKTGVYDGVMVFATAAMPQKLDTVAPYITISNIGTGYAGGVTANQDRWKKLPGEVKA
                     AIMTGVGAYKTAFYKELDKRIKASFAIMKKRGAKIAQLPAGDRVKWAKTVPNVAKGWA
                     AGLTKKGLPGRQVLEGYMN"
     gene            complement(1325..>1741)
                     /locus_tag="QF359_12465"
     CDS             complement(1325..>1741)
                     /locus_tag="QF359_12465"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJO87767.1"
                     /translation="YERAGFLIRRCHQVIEAYFTEFCNGHNITSVQFAAMMILRRRPG
                     IDQATLSDLVAFDRATTGDVVARLVRKGLVRRRVSNDDQRKKLLSLTSKGKKTLTQIH
                     PLVEKAQETFLEPLSAKDWENLKEVLLTLAAPDYQK"
BASE COUNT          376 a          486 c          439 g          440 t
ORIGIN      
        1 tcgttcatat agccttcgag aacctggcgt cccggcaggc ctttcttggt caagccggcg
       61 gcccatccct tggcaacatt gggaaccgtc ttggcccatt tgacgcgatc accggcgggc
      121 aattgggcaa tcttggcgcc gcgctttttc atgatggcga agctggcctt tatacgcttg
      181 tccagttcct tgtaaaacgc cgtcttgtag gcgccaacac cggtcatgat ggcagctttg
      241 acttcgcccg gcagcttttt ccaacggtcc tgattggcgg ttacgccacc ggcataaccc
      301 gtaccaatat tcgagattgt gatatagggc gccaccgtgt ccagtttttg cggcatcgcc
      361 gccgtggcga ataccatcac cccgtcataa acaccggttt tgatgtcatt gaaatagagc
      421 gtcaggttgg ccgacacgcc gaccccaccg gtacccttaa accagttgac cgccggtccg
      481 ggtgcgccga atttatggcc tttcagatcg gccagtttct tgatcggata gttagaccat
      541 aggtgatagg aatcggccgc aattccgcca cccagataga cttggttata cttggtccat
      601 tgagcgccaa acgcggggat ttttttctgc aaaccttcaa cgatttcggt cacggtctcc
      661 gggctagctt cgttgaaggg cgacatatag ccgacattct gcaacggcag tttggcagga
      721 tcgaaaaggt tccaagctcc accaatatcg gcgagacctt gttgaatggt ttccaactcc
      781 tcgcccacct ttgccaaagt gccggcgtag gcctgggtcc attgaatttt atatttaccg
      841 cttttggcca attcgctgtt ggcggttggg atcagggtat cccggaaatg cttcacccac
      901 agcaataccg gcggatggcc ggccacaatg gtcattttaa cggtttcggc tgctaggccc
      961 ggctgaggaa ccgccatcag gcctaaggcg acgattaggc tcatcgtaac tcggcgcgcc
     1021 aaccggctta ccagccaatt cactttggta tcgagtttca tcttcggtct ccctattcca
     1081 ctttacactc gaatttcggc atttcgttcc gtgggaccgt tctccgcggc tcccctatcg
     1141 gacagccctt aagactccaa atgagaaggt gtttgcactc tttaaaacgc acggtaaata
     1201 tatatttgat gatcggacta acccgttttt gactcccccc tcggaacaaa gcatccgtta
     1261 attgataagg atacatattt tattattcaa gtcaatttat agaagccagt cgcggcttga
     1321 taaattattt ctggtagtcg ggagccgcca gcgtgagcaa cacttccttc agattttccc
     1381 agtccttggc gctaagcggt tccaggaaag tctcctgcgc tttctccacc aggggatgta
     1441 tttgagtgag tgtctttttt cctttgctgg tcagggacag aagtttctta cgctggtcgt
     1501 cgttggaaac gcggcggcgc accagacctt tccggaccag acgagcgacc acgtcacccg
     1561 tcgtcgcacg gtcgaaggcg accaaatccg acaaggtggc ctgatcgata ccgggccgcc
     1621 gccgaaggat catcatggcc gcaaactgga ccgaggtaat gttgtggccg ttacaaaatt
     1681 cagtgaaata agcctcaata acctgatggc atcggcggat caaaaatccg gcccgctcat
     1741 a
//
LOCUS       DASCNL010000949         1272 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001949993, whole genome shotgun sequence.
ACCESSION   DASCNL010000949 DASCNL010000000
VERSION     DASCNL010000949.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001949993"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="QF359_12470"
     CDS             complement(<1..548)
                     /locus_tag="QF359_12470"
                     /inference="COORDINATES: protein motif:HMM:NF012339.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJO87768.1"
                     /translation="MTEYFAPDERFLPEDFDFEASAAMDEKPINPINELAKAETTRRT
                     FIKGAIASGTAVSAAGFVFRGAGSGAIAATMKPKLVSLSINGKTRRVDVSAEETLAFT
                     LRYKLGLTGSKLGCDRGECGSCTVLVDGVPTYSCPTLTQSVGKGKVTTVEGVKGKDGG
                     LHSVQKAMVEELAPQCGFCTSGL"
     gene            complement(782..>1272)
                     /locus_tag="QF359_12475"
     CDS             complement(782..>1272)
                     /locus_tag="QF359_12475"
                     /inference="COORDINATES: protein motif:HMM:NF019843.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJO87769.1"
                     /translation="PRLFTAIALLILGWPLAGQGESKAANNFYNGLSAYNLGKYGKAA
                     LIWSHLAEKGSAKAQSSLGTLYYTGSGVTRDFDRARELFIAAAQQNVPQAQMFLSLMY
                     RLGDGVSQSYLLSYMWCDIAISAGHEGASYVIQEIAEHLNDEEVLEAQRLSSEWREII
                     LK"
BASE COUNT          322 a          314 c          296 g          340 t
ORIGIN      
        1 agacctgaag tgcagaagcc gcactgtgga gctaattctt caaccatggc tttttggacc
       61 gaatggagac cgccatcttt accctttaca ccttcaaccg tggttacttt acctttgcca
      121 acactctggg tcagggtcgg gcaggaatac gtcggcacgc catcgaccag aacggtacag
      181 gacccgcatt caccacggtc acaaccaagc ttgctgccgg ttagcccaag tttgtagcgc
      241 aatgtgaacg cgagcgtttc ctctgcgcta acatcgacgc gccgggtttt accattaatg
      301 ctcaagctta ccagttttgg cttcatcgtt gctgctatag cgccggaacc agcgccacgg
      361 aagacgaaac cggcagcaga cacggccgtg cctgaggcaa ttgcgccttt aataaaagta
      421 cggcgagtcg tttctgcttt cgccaattca ttgattggat ttattggttt ttcatccata
      481 gccgccgaag cttcaaaatc gaagtcttcc ggcaagaagc gttcgtcagg tgcaaaatat
      541 tcggtcatag ccgacctccc ttagtcatat cattgagata gattaacgcc gcgaccacgg
      601 atggatcgcg ttttaatttt tgtgcagcct ccctttgttt gccacgccat tatcattaga
      661 ataatgattg ttcaggcgtt taacgaaatt ataagcacag gttgaaattt tcggcaatag
      721 gagatttact ttgggagcgt aaaggttacg ttatattaga aatcttatga attgaatctc
      781 actatttgag tattatctcg cgccattcag aggaaagccg ttgggcctcc aaaacttcct
      841 catcatttaa atgttcggca atttcttgaa tgacgtaact agcgccttcg tgcccagcgc
      901 taatggcaat gtcgcaccac atataggaca gtaaatatga ttggctgacg ccatcaccga
      961 gtcggtacat taagcttaga aacatttgag cttgggggac attttgttga gcagctgcga
     1021 tgaacaactc gcgagcgcgg tcaaaatctc gcgtgacccc acttccagta tagtaaagcg
     1081 tacccaggct gctttgcgct tttgccgagc ctttttctgc caagtggctc cagatcaaag
     1141 ctgcttttcc atatttccca agattgtaag cagatagccc gttatagaaa ttattagcgg
     1201 ccttggactc accttggccg gctaacggcc aaccgagaat gagtagggca atagcggtaa
     1261 ataatcgagg tt
//
LOCUS       DASCNL010000950         1185 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001952551, whole genome shotgun sequence.
ACCESSION   DASCNL010000950 DASCNL010000000
VERSION     DASCNL010000950.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001952551"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="QF359_12480"
     CDS             complement(<1..293)
                     /locus_tag="QF359_12480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87770.1"
                     /translation="MSGYRSLPLIILTGLITLLLTGVAASTDNQNRQNTVHHAISQKG
                     LFKVSLTSIANSTPLNKLHHWHIRLATRRGMKISGANFEVTGKTLDHDHNLPTS"
     gene            complement(390..800)
                     /locus_tag="QF359_12485"
     CDS             complement(390..800)
                     /locus_tag="QF359_12485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87771.1"
                     /translation="MSQDLKAELKDRTDTIEEAFEFMMAYAAQGRDQEDPSEGGGIRS
                     WLAKAAAALEYFYQLAQDQAKSTGSIEVEEWTEFLEILKTDAARAQALIAFAQSQPSL
                     SSELIDNLNATNHIRTILTDIFLLDSAFEAHDRT"
     gene            complement(816..>1185)
                     /locus_tag="QF359_12490"
     CDS             complement(816..>1185)
                     /locus_tag="QF359_12490"
                     /inference="COORDINATES: protein motif:HMM:NF013460.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HJO87772.1"
                     /translation="TSKQPPDRPGKYPLLQKLYHHGIAAIVLLLIATGGLMLAKIDTP
                     FWQRNPYMLSAETWGYIYVLHDLAAMAVLALLMIHIYFAIRPEKLWITRSMILGWITR
                     QEYHDNHDPEAWVIETDKSK"
BASE COUNT          315 a          252 c          291 g          327 t
ORIGIN      
        1 gatgtcggca aattatggtc atgatccagc gttttccccg taacctcaaa attggcaccg
       61 gatattttca tgcctcgacg cgtggccaac cggatatgcc aatgatgtaa tttattaagg
      121 ggtgtggagt tggctatgct ggtcaaggaa actttaaaaa gccctttttg agaaatcgca
      181 tgatgaacgg tattttgccg attttggtta tcggtgctgg cggccacgcc ggtcaacagc
      241 agtgtaatca agccggtaag aataattaag ggtaatgagc gatagccgga catacttttt
      301 cacaaacctc tgctcagata cctaaattgg caccgataaa atgagtttaa aagtatagct
      361 taaatcaaga aataattaac cttcaaagac tacgtccgat catgtgcctc gaatgctgaa
      421 tcgagcaaga agatatccgt cagtattgtc cggatatgat tggtggcgtt tagattatcg
      481 atcaattctg aacttaagga tggctgggat tgagcaaagg cgattaaggc ttgggcgcgc
      541 gccgcatcag ttttcaaaat ttcgagaaat tctgtccatt cttcgacctc aatactgccc
      601 gttgatttgg cttgatcttg agcaagttga taaaaatatt ccaaggctgc cgcagccttg
      661 gctaaccaag aacggatacc accaccctcg gacgggtctt cctgatcccg gccttgcgcg
      721 gcataagcca tcataaattc aaaagcttct tcaattgtat ctgtgcgatc ttttagttca
      781 gctttaaggt cttgagacat ttcggatttc caaagttatt ttgatttgtc ggtttcgatg
      841 acccaggcct cggggtcgtg attgtcatgg tattcctggc gggtgatcca gcctaaaatc
      901 atcgaccggg taatccatag tttttccggt cggatagcga aatagatatg gatcatcagt
      961 aaagccagca ccgccatggc cgcaagatcg tggaggacat aaatataacc ccaggtttca
     1021 gccgacaaca tatagggatt gcgttgccaa aagggtgtat cgattttggc cagcataagg
     1081 cctcctgtag cgatcaggag caaaacgata gcggcgatgc cgtggtgata taatttttgt
     1141 aatagaggat attttcccgg tcggtcaggc ggctgcttgc tggtg
//
LOCUS       DASCNL010000951         1168 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001956176, whole genome shotgun sequence.
ACCESSION   DASCNL010000951 DASCNL010000000
VERSION     DASCNL010000951.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1168)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1168)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001956176"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            277..>1168
                     /locus_tag="QF359_12495"
     CDS             277..>1168
                     /locus_tag="QF359_12495"
                     /inference="COORDINATES: protein motif:HMM:NF015410.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF294 nucleotidyltransferase-like
                     domain-containing protein"
                     /protein_id="HJO87773.1"
                     /translation="MKSQTALFSKLVKDSMCQVPLKTLGATCEEAVQAMRDAESSAVV
                     ILNAENKPAGILTEQDVARRITFNLERSTAVSEVMTAPVQTIAETEFLFHAIAVMRRN
                     NIRHMPVFDQSGSATGLLRLKDALFSSDESLMKQIDLLTQDEDVEGFKEIKQAQVDLA
                     AQLMDDNVPVPEILALLTQINSDIYHRVTDCTIMYMQQSGNGSPPVDFSVIVMGSGGR
                     GENFIFPDQDNGLILEDYPDDRHNEIDAWFIPFSESLTNTMDRIGFPLCNGHVMATNP
                     LWRKTRSQWAAQVDQWSRRRN"
BASE COUNT          325 a          241 c          286 g          316 t
ORIGIN      
        1 tgatatcatc agtgcggtcc agcaataaca aatcagacat gatttactcc ccaattattt
       61 ttatatcttt agctgggtaa atctaaatag aggtaagggt tatttggcaa gagctaagtg
      121 aaaataattt gccgacaaat aacattgatt gattcccgaa tttaacacgt tatttttcgc
      181 agtaatttta aaggaattgt gtttaaataa ttgcgttaaa tcaagggcat cgccatcaaa
      241 aagctgtaat aagcgtatat aaccaagggg tattagttga agtcacaaac ggcattgttt
      301 agcaaattgg tcaaggacag catgtgtcag gttcctctta agacgttagg ggcaacttgc
      361 gaagaagctg ttcaagctat gcgtgatgca gagtcttctg ctgtcgttat ccttaacgct
      421 gagaataagc cagccgggat attaaccgag caggatgtcg cgcgccggat cactttcaat
      481 ttggaacgta gtacagcagt ttcagaagtg atgaccgcgc ccgttcaaac cattgccgaa
      541 actgagttcc tttttcatgc catcgctgta atgcggcgca ataacattcg ccatatgccg
      601 gtgtttgatc aatccggtag tgccaccggc ttattgcgtc tgaaggacgc tttgttttca
      661 tcggatgaga gtttgatgaa gcaaatagat ctcctgaccc aggatgagga cgttgaggga
      721 tttaaagaaa taaagcaggc gcaagttgat ctggccgccc aattaatgga tgacaatgtg
      781 ccggtgccgg aaattctcgc tttgctgacc cagatcaata gcgatatcta ccaccgggtc
      841 accgattgta cgattatgta tatgcagcaa tccgggaacg ggtcaccacc ggtagatttt
      901 tctgtcattg ttatgggttc gggtggacgc ggcgaaaact tcattttccc ggatcaggat
      961 aacggcctta ttttggagga ctatccggat gatcggcaca acgaaattga tgcctggttt
     1021 attccgtttt cagaaagcct gaccaacaca atggatcgca tcggattccc actgtgtaat
     1081 ggacatgtta tggcgaccaa tccgctatgg cgaaaaacgc gatcacaatg ggccgcgcag
     1141 gttgatcagt ggagtaggcg gcgcaata
//
LOCUS       DASCNL010000952         1395 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001957552, whole genome shotgun sequence.
ACCESSION   DASCNL010000952 DASCNL010000000
VERSION     DASCNL010000952.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001957552"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..974
                     /locus_tag="QF359_12500"
     CDS             <1..974
                     /locus_tag="QF359_12500"
                     /inference="COORDINATES: protein motif:HMM:NF013630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HJO87774.1"
                     /translation="IETKTKTLQITAPSFDIVRITPQGDTVMAGRAKPDVKVEIYDGA
                     NKIGEVVADKRGEWVFVPTSPLAPGSRRLSLKMIDLDGSVVASESDVVLVVPEKGKDI
                     AGKSVDQPSQPLAMKVPAKPGSGVEILQKPKPDAPNITGKSVDQPSQPLAMKVPAKPG
                     SGVEILQKPRPDAPDITLTIDAIDYDDSGKLDIIGKAPPAANINLYLNNNFFGRGKSN
                     HRGLWRQTPERKVNPGIYTVRADLIGNDGEVKNRIEVVFARSVPLTGIKPGTLVVVES
                     GNSLWRIARRTYGRGFRYTVIYAANKDQIKDPNLIWPGQVFSLPSVN"
     gene            1002..1133
                     /locus_tag="QF359_12505"
     CDS             1002..1133
                     /locus_tag="QF359_12505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87775.1"
                     /translation="MERLKVAKHEVMAMDGRMSSSDSSLNDVVGDEDRTEWQDRIID"
BASE COUNT          412 a          314 c          337 g          332 t
ORIGIN      
        1 aaatagaaac aaaaacaaaa actctacaaa tcaccgcccc tagtttcgat atcgtccgca
       61 tcacgccaca aggcgacact gtgatggccg gtcgcgccaa acctgacgta aaagtggaaa
      121 tatatgatgg tgctaataaa attggtgaag ttgtcgctga taaaagaggc gagtgggtgt
      181 ttgtaccgac ctcaccgttg gcgccaggca gccgtcggct ttccttaaaa atgatcgatc
      241 tcgatggttc cgttgttgcc tctgaatccg atgtggtttt ggtagtgccg gaaaaaggca
      301 aagacattgc cggtaaatca gttgatcaac cttctcaacc actggccatg aaggtcccgg
      361 ccaaaccggg ctcgggtgtc gaaatcttgc agaaacctaa gccagatgca ccaaatatta
      421 ccggtaaatc agttgatcaa ccttctcaac cactggccat gaaggtcccg gccaaaccgg
      481 gctcgggtgt tgaaatcttg cagaaaccta ggccagatgc accagatatt accctcacca
      541 ttgatgccat tgattacgac gatagtggca aactcgatat tattggtaaa gcgcccccgg
      601 cggcgaatat taatctctat ctgaataata atttttttgg acgcggcaag tcaaatcacc
      661 gcggcctatg gcgtcaaaca ccagaacgca aagttaatcc tggcatatac actgtgcgag
      721 ccgacctgat cggtaatgac ggcgaagtaa aaaaccggat tgaagtcgta ttcgcgcgct
      781 cggtgccact aaccggcatt aaaccgggta ccttggttgt agttgaatcg ggcaacagtt
      841 tatggcgcat tgcgcgcaga acctatggta gaggtttccg ctatacggta atttatgcag
      901 ctaataaaga tcaaattaag gaccccaatt tgatttggcc aggtcaagtg ttttcgctcc
      961 catctgtaaa ctgaggaacc gaggatgata ttgaagtcat catggagcgt ttgaaagtcg
     1021 ccaagcatga agttatggct atggatggac ggatgagcag ttcggattct tcactcaatg
     1081 atgttgtcgg tgatgaagat aggacggaat ggcaagaccg tataattgat tagtcggatt
     1141 ccgtggaaaa caccgtcgca gcataccacg aacgtgaatt ttaacggggt ccgctagttt
     1201 cagcacttga tgaattaact gagtgggaaa gtaaaatatt tgttacccgc cggatgaatg
     1261 aggaaaaagc aacactcggc aaacaaggtc aattatttca gatttcccct gaacgcgtac
     1321 cgcaaatcga acatagcgtt tttgcaaaat tccagaaaat tgtgatgaaa gaacaccaac
     1381 gcgtcacaaa ttcag
//
LOCUS       DASCNL010000953         1218 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001958798, whole genome shotgun sequence.
ACCESSION   DASCNL010000953 DASCNL010000000
VERSION     DASCNL010000953.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001958798"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1137
                     /locus_tag="QF359_12510"
     CDS             <1..1137
                     /locus_tag="QF359_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase family protein P"
                     /protein_id="HJO87776.1"
                     /translation="MHTDGSFDVYTDPRKYSDRILATLDDNIKVHAQADFLPALEELG
                     SNKFKVGLDLTSAAEIISQTLKNSGATVRRLTDPCQLPKARKNEVELAGMRNAHLRDG
                     VALTRFLAWLDENAENGKITEMSAASQLEMLRRQGDFFQGLSFPTISGSGPNGAIVHY
                     RVTNESNRELDKNSLYLVDSGAQYLDGTTDVTRTVAIGTPNSEMIDRFTRVLKGHIAL
                     ASATFPAGTSGSQLDILARAALWQAGLDYDHGTGHGVGSYLGVHEGPQRISKLPNRIA
                     LEPGMVISNEPGYYKHDEYGIRIENLIVVTKASISDQSERPQLCFETLTLAPIDLALV
                     DVSMLTELEIKWLNTYYEKVRSALEPLMDNKLKEWLAKSTKALK"
BASE COUNT          321 a          293 c          293 g          311 t
ORIGIN      
        1 atgcacaccg acggctcatt cgatgtttat accgatcccc gcaaatattc ggatcgtatt
       61 ttagcaactt tagacgacaa tattaaagtt cacgcgcaag cagactttct gcccgcactg
      121 gaagaactcg gcagtaacaa attcaaggtg ggtttggatc taacctctgc cgccgagata
      181 atatcgcaaa cattgaagaa ctcgggcgct actgtccgtc gtctcactga cccctgccaa
      241 ttgccaaaag cccggaaaaa tgaggttgaa ttagctggta tgcgcaatgc tcatttgcgt
      301 gatggcgtcg ccctgacccg ctttttagcc tggcttgatg aaaatgccga gaacggaaaa
      361 ataaccgaga tgtcggctgc cagccaattg gaaatgttgc gtcgccaagg agattttttt
      421 caagggctta gctttcccac aatttccggc tctggcccca atggcgctat tgtccattac
      481 cgggttacca atgaaagcaa tcgagaactc gataagaatt cgctctatct tgtcgattcc
      541 ggggcacaat atttggatgg tacgaccgat gtgaccagaa ccgtcgcgat tggcacgcca
      601 aatagtgaaa tgattgaccg ctttacccgc gtccttaaag gacatattgc tttggctagc
      661 gcaactttcc ctgccggcac aagcggttcc cagcttgata ttttggcgcg ggcagcacta
      721 tggcaagccg gattggatta cgatcatggg acgggccatg gcgtcggcag ttatttgggc
      781 gttcacgagg ggccgcagcg tatttcaaaa ctgccgaatc gcatcgcgct ggaacccggc
      841 atggtgatat caaatgaacc cggctactat aagcacgatg aatacggcat tcggattgaa
      901 aatttaattg tcgtcaccaa agcgtcaatt tccgaccagt cggaacgtcc gcaattgtgc
      961 tttgaaacgc ttacgctggc acccatcgat cttgcccttg tcgatgtatc tatgctgact
     1021 gaacttgaga ttaagtggct caatacttat tacgaaaagg ttcgatcagc gttagaacca
     1081 ctgatggata ataagttgaa agaatggctg gccaaatcta ctaaagcatt aaaataaaaa
     1141 ggggctgtcc cagttaatta gcccatgtga cctttaaccc attgtcttaa ttgtgataat
     1201 tggtttgacg ggtcactg
//
LOCUS       DASCNL010000954         1760 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001961196, whole genome shotgun sequence.
ACCESSION   DASCNL010000954 DASCNL010000000
VERSION     DASCNL010000954.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001961196"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1760)
                     /gene="pheT"
                     /locus_tag="QF359_12515"
     CDS             complement(<1..>1760)
                     /gene="pheT"
                     /locus_tag="QF359_12515"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HJO87777.1"
                     /translation="ESIIEVAEDAEVGSPAAEALDMTDPVIDIAITPNRGDCLGIFGV
                     ARDLAAAGVGTLKPLDVPAVKGSIKSPVTVSLDFDDDHKDACPMFVGRYFKGVNNGES
                     PQWLKDKLLAIGLRPISALVDITNYSTIAFNRPLHVFDADKIKGNIHVRMANDGEKML
                     ALDGKEYELDGEMTVIADDQDAEALAGVMGGERTGVSETTINVMLEAAYFNPVRTAMT
                     GRKLNLQSDARFRFERGVDPAFLIDGTEIASQLILDLCGGEASEIITAGSEPEWRRNY
                     FLRDTRVEQLGGVEVTPERIRKILESLGFEVTKADGGWNIITPSWRYDVAGEADLVEE
                     VLRINGFDEIPIVPLERETVLPHGAINMIQDRRSRVRRTLATRGMTEAVTFSFLPADQ
                     ADLFGGVPESIHLVNPISTDFAIMRPSILPNLITAAGRNADRGISDVALFEVGPQYTG
                     ENPEDEAIVTAGLRVGSATPRNWAGGARDVDVFDVKADVLAALEQIGGSAVNAQVQQG
                     GPSWYHLGRSGTVQLGPKSVLAHFGEIHPTILKTMDVDGPIVGFEIYLDNAPLPKAGK
                     GTARSKLDLHELQAVERDFA"
BASE COUNT          426 a          488 c          443 g          403 t
ORIGIN      
        1 ggcaaagtcg cgctcaactg cctgtagctc gtgcaaatct agttttgaac gcgcggtgcc
       61 tttgcccgct ttcggcaaag gagcgttgtc aagataaatt tcaaagccga caatcggccc
      121 atcaacatcc attgttttca aaatagtcgg atgtatttct ccaaaatgtg ccagcacgga
      181 ttttgggccc aactgtaccg tgccagaacg gcccagatga taccaggacg gccctccttg
      241 ctgaacttga gcattgactg ccgaaccgcc gatttgctca agtgccgcca aaacatcagc
      301 tttgacgtca aagacgtcaa cgtcacgagc acctcccgcc cagttgcgag gcgtggcact
      361 gccgacacgc agaccagcgg taacgatagc ttcatcttcc gggttttctc cggtgtattg
      421 cgggccgact tcgaacaggg cgacatcgct gataccgcgg tcagcattac gtcccgccgc
      481 cgtgattaaa ttcggcaaaa tcgatggccg cataatagca aaatcggtac tgatcggatt
      541 gaccagatga atactttccg gcacgccgcc gaataaatcc gcttgatctg ccggtaaaaa
      601 tgaaaatgtc acagcttcgg tcatgccgcg ggttgccagc gtgcgccgga cgcgggagcg
      661 gcgatcctgg atcatattta tggcaccgtg agggagcacc gtttcacgct ctagcggaac
      721 aatcgggatt tcatcaaagc cgttaatacg cagcacttct tcaaccagat cagcctcacc
      781 agcaacatca taacgccacg acggtgtgat tatattccaa ccaccatcgg ctttggtgac
      841 ttcaaagccg aggctttcga gaattttccg gatgcgctcg ggagttacct caacgccgcc
      901 taattgttca acacgggtat cacggaggaa atagttacgc cgccattcgg gctcgctgcc
      961 ggcggtgata atctcgctgg cttctccccc gcagagatcg agaattaact gagatgcgat
     1021 ttcggtgccg tctatgagga aagccggatc gacaccgcgt tcaaagcgga agcgggcatc
     1081 cgattgcaga tttaatttgc ggcccgtcat ggcagtacgg accggattaa aataagccgc
     1141 ttccagcatg acattgatgg tagtttcaga aacacctgtc cgttcaccgc ccatcacacc
     1201 ggcgagggct tcggcatcct ggtcatcggc aatgacagtc atttcgccat caagttcgta
     1261 ttccttgccg tcgagggcga gcattttttc accgtcattg gccatccgca catgaatgtt
     1321 gcctttgatt ttatcagcat caaaaacatg caagggccga ttgaaggcga tggtcgaata
     1381 gttggtgata tcgactaatg ctgaaatcgg ccgaagtcca atcgccagta atttgtcttt
     1441 gagccattgc gggctctcgc cgttattgac gcctttgaaa tagcggccaa cgaacatcgg
     1501 gcaagcgtct ttgtgatcat catcgaaatc aagactgaca gtgaccgggc tcttaatgct
     1561 gcctttgacc gccggtacat ccaaaggttt caaggtgccg acaccagcgg cggcaagatc
     1621 gcgggcaaca ccaaagatgc caaggcaatc cccccggttt ggcgtgattg caatatcaat
     1681 caccggatcc gtcatatcca aagcttcggc agcaggagac ccaacttcgg cgtcttcggc
     1741 aacttcgata atgctttcat
//
LOCUS       DASCNL010000955         1102 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001967683, whole genome shotgun sequence.
ACCESSION   DASCNL010000955 DASCNL010000000
VERSION     DASCNL010000955.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001967683"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..867)
                     /locus_tag="QF359_12520"
     CDS             complement(<1..867)
                     /locus_tag="QF359_12520"
                     /inference="COORDINATES: protein motif:HMM:NF024809.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO87778.1"
                     /translation="MSKKYKIFGAEMSPYSVKVRSYFRYKNIPYQWLQRMRHEEEFKK
                     FARLPIIPLVVTPEEEGIQDSTPIIERLEQIFPEPLIHPEDPTLAFLSALIEEYGDEW
                     GNKIMYHHRWYAELDQLTTAHVLARDVIPDADGEAVEGLAKKVRDRMSGRGAFVGSSD
                     ETAPLISGYLDRLFEILEPHFENRLYLFGDRPSFADFGLGLQVYEMALDPTAGAIIRA
                     RAPNVLKWVYRMTDPRNDGSFENWLSLQPTLEPLLADAGTYFLPWSTANAEALAADQE
                     AFSVELNGEAYVQ"
     gene            complement(955..>1102)
                     /gene="prfB"
                     /locus_tag="QF359_12525"
     CDS             complement(955..>1102)
                     /gene="prfB"
                     /locus_tag="QF359_12525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148561056.1"
                     /note="recognizes the termination signals UGA and UAA
                     during protein translation a specificity which is
                     dependent on amino acid residues residing in loops of the
                     L-shaped tRNA-like molecule of RF2; in some organisms
                     control of PrfB protein levels is maintained through a +1
                     ribosomal frameshifting mechanism; this protein is similar
                     to release factor 1; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HJO87779.1"
                     /translation="IRSYVLQPYQMVKDLRTEVETSNTKAVLDGDLDDFMAAALAARI
                     EGNG"
BASE COUNT          268 a          291 c          262 g          281 t
ORIGIN      
        1 ctgaacatag gcttcaccat ttaactcgac cgagaatgcc tcctgatcgg cagccagcgc
       61 ctcggcattt gcagttgacc atggaaggaa atatgttcct gcatcagcga gtagcggttc
      121 caaagttggc tgcaaactca gccaattctc aaacgagcca tcattgcgcg gatctgtcat
      181 ccgatatacc catttcagca catttggcgc ccgggcccgg ataattgcgc cggccgtggg
      241 gtcgagcgcc atctcataaa cctgaagccc cagaccgaaa tcggcgaacg acggccgatc
      301 gccaaagaga tacaaacgat tttcaaaatg aggttccaaa atttcgaaca gccggtctag
      361 atagccggaa atcaaaggtg cggtctcgtc acttgacccc acaaaagcgc cacgtccgct
      421 catacggtcg cgaacttttt tcgccaagcc ttcgacggct tcgccatcgg cgtcgggaat
      481 tacatcacgg gccagcacat gtgccgtcgt tagctgatcc agttcggcgt accagcggtg
      541 gtgatacata attttgttgc cccattcatc gccatattcc tcgattaagg cggacaggaa
      601 tgccagcgtc ggatcttctg ggtggattaa cggctcggga aaaatctgtt cgagcctttc
      661 tattatcggt gtcgaatcct ggatgccttc ctcttccggc gttacgacca gaggaataat
      721 tggcaggcga gcaaacttct tgaattcctc ttcatggcgc atcctttgta gccattgata
      781 aggaatattt ttgtagcgga aataagaacg aactttgact gaatagggcg acatctcggc
      841 accaaatatt ttatatttct tgctcatttt gattgtaacc cctcttgctc gtggattcgt
      901 taaattgacg attacgcctg ttctagaact tttatgaatt tgtctttacc gatattagcc
      961 gttcccttca atccgcgccg ccagggcagc ggccataaaa tcatcgagat cgccatcaag
     1021 cacagccttg gtatttgaag tttccacctc ggtgcggagg tctttgacca tctggtaggg
     1081 ctgcaaaacg taagagcgaa tc
//
LOCUS       DASCNL010000956         2184 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001968328, whole genome shotgun sequence.
ACCESSION   DASCNL010000956 DASCNL010000000
VERSION     DASCNL010000956.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2184)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2184)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001968328"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(160..2166)
                     /gene="asnB"
                     /locus_tag="QF359_12530"
     CDS             complement(160..2166)
                     /gene="asnB"
                     /locus_tag="QF359_12530"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HJO87780.1"
                     /translation="MCGIAGILRTASEQPVDRSVLVAMNQSMAHRGPDGEGIWLSPDQ
                     QFGLGHRRLSIIDLSDDAAQPMANQDGSIIVTFNGEIYNHAALRLELLAAGYQFATDH
                     SDTEVLVHGFQAWGIDGLLLRLEGMFAFAIWEDKTKKLTIARDRVGIKPVYFTKRGGW
                     FLFASEIKGLLCHPAVPRRVGKLALYHYLTYLTTPAPLTMFDGIYKLPASTYMEIDQA
                     GRITSERYWDAMPGKSDVDGELSGLKGAAQEDFFIEGVRNRLSDAVEKRMMSDVPYGA
                     FLSGGIDSSVNVALMDRFTDEPVNTFTVGFKDHEHLNELEYATKVATLFKTNHHEVLV
                     GEDDMVGYLDDLIRYQDEPLADWVCIPLHFVSKLAAEAGVKVIQVGEGSDEQFCGYNS
                     YMMYLKLHQHCYGPFQKFLPKPLQRVAAGAAQGIARLKPSFGLYADAVDRAAENKEAF
                     WSGAIAFWESQKKDILPAMGAELPHGAEEMIEAGLLSADILVPDSFTVANDTLTEFDR
                     AHPGRDQLTRMIHNEFRLRLPELLLMRVDKITMAESLEARVPFLDHALAEFTMDMPQS
                     TKINNGVAKYILKKSVEGIIPDDVIYRKKMGFNAPMAEWLRGDFGGKAEIGIMNSPLL
                     DQIGFDREQVAGLISDHRQGRRDTSLMVWVLYNLTAWYSHWIEV"
BASE COUNT          570 a          593 c          503 g          518 t
ORIGIN      
        1 tagaaaactg gaggacgata acaccgaccc ggtgttattt ggcgtggtta tctcgatctt
       61 ggcttttaat ttcatcagct ttggcgtctg gcagagctgg tggatctcta cgcaattctt
      121 atgtctcggc ctgacgttgg tgattaccag acgaaatgtc taaacttcga tccaatggga
      181 ataccacgcg gtcaaattat acaacaccca aaccatcaat gatgtatcgc gccgcccttg
      241 gcgatgatca gagataagac ccgcaacctg ctcgcggtca aatccaattt gatcaagcag
      301 cggtgagttc ataatgccga tctcagcttt accaccgaaa tcaccccgca gccattctgc
      361 cattggcgcg ttgaagccca tttttttgcg gtagatcaca tcgtccggaa tgataccttc
      421 gacagatttc ttgagtatgt atttagccac gccattatta attttagtgc tctgtggcat
      481 atccatggtg aactcggcta gggcgtgatc caaaaacggc acgcgtgctt ccagcgactc
      541 cgccatggtt attttatcga cccgcatcaa taacagttcc ggcaggcgca accgaaattc
      601 gttatggatc atacgcgtca gttgatcccg ccccggatga gcacggtcaa attcagtcaa
      661 agtgtcattg gcgacggtaa aactatctgg caccaatatg tcggcagata acagtccagc
      721 ttcaatcatt tcctccgcgc cgtgcggcag ctctgcgccc atcgcgggaa ggatatcttt
      781 cttttgcgat tcccaaaacg caatggcgcc actccaaaag gcttctttgt tttcagctgc
      841 ccgatcgact gcatcggcat aaagaccaaa agatggttta agacgagcaa tcccctgcgc
      901 tgctccagca gccacgcgtt gtaacggttt tggcaggaat ttctgaaatg gtccgtagca
      961 atgttgatgc aatttgagat acatcatgta gctgttatag ccgcaaaatt gttcatccga
     1021 accctcaccc acttgaatga ctttgacacc cgcttccgcc gccagcttgg aaacaaaatg
     1081 cagcgggata catacccaat cggccagcgg ctcatcctgg taacgaataa gatcatcgag
     1141 atagccaacc atatcgtctt caccaaccag cacttcgtga tgattggttt tgaacagcgt
     1201 agcgaccttg gtcgcgtatt cgagctcatt tagatgctcg tgatctttaa agccgaccgt
     1261 aaaagtgttc accggctcat cggtaaagcg atccatgagt gcaacattaa ccgacgagtc
     1321 gatgccgcct gacagaaaag caccgtaagg cacatccgac atcatgcgtt tctcgacggc
     1381 atcactaagg cgattgcgaa cgccctcaat gaagaaatcc tcttgggcgg caccttttag
     1441 acccgacagt tcaccgtcga catcactttt acccggcata gcatcccaat agcgctcaga
     1501 ggtgatacgg ccagcctggt cgatttccat ataagtcgac gctggtaatt tatagatacc
     1561 gtcaaacatc gtgagcggtg caggcgtcgt caagtaagtc aaataatgat agagcgccag
     1621 tttaccaacg cgtctcggca cagcaggatg gcacagcaag cctttaattt ctgaggcgaa
     1681 taaaaaccag ccgccgcgtt tggtgaaata gaccggctta atacccaccc ggtcgcgggc
     1741 aatggtgagt tttttagttt tatcctccca tatggcaaag gcgaacatac cttcaagccg
     1801 caacaacaac ccatcaatcc cccaagcttg aaaaccatgc accagcacct cggtatctga
     1861 atgatcggtg gcaaactgat agcccgccgc cagaagttct aggcggagcg ccgcgtggtt
     1921 ataaatttcg ccattgaaag taacaatgat cgaaccatcc tgattggcca tcggctgggc
     1981 ggcatcatcc gacagatcaa taatcgagag gcggcgatga ccaagcccaa actgctgatc
     2041 cggagacagc caaatgccct caccatccgg gccgcgatgc gccatcgatt ggttcatagc
     2101 caccaaaacg gatcggtcta cgggctgttc actggcagtt cttaaaatac ccgcaattcc
     2161 acacatgtag cggttttagc ttaa
//
LOCUS       DASCNL010000957         1361 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001972435, whole genome shotgun sequence.
ACCESSION   DASCNL010000957 DASCNL010000000
VERSION     DASCNL010000957.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1361)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1361)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001972435"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="QF359_12535"
     CDS             <1..569
                     /locus_tag="QF359_12535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="chitin deacetylase"
                     /protein_id="HJO87781.1"
                     /translation="ASNPERNKYELKKSKARMVAELGKAPEMFAYPFGEASKQVQKLV
                     QKNGYNFAFGQHSGVVNSTTNINYIPRFALNKNYDDMRRLRLVLNALPLSVTNITPAD
                     PLLITNNPPNLGFTITSTKNNLHRLSCFSSSEGRVQVERFSGLKGATRIEIRMTSAFP
                     KGRTRINCTLPGPDNRWHWFGTLFVVLK"
     gene            complement(599..1315)
                     /locus_tag="QF359_12540"
     CDS             complement(599..1315)
                     /locus_tag="QF359_12540"
                     /inference="COORDINATES: protein motif:HMM:NF013954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HJO87782.1"
                     /translation="MPRIFVVTIPQDMLHIRVPAERKRIFFKTVLPLVLKANDDILKD
                     RQRVLRIRTTKNKTGKITVADRLWLAAMAERYDVDRYDLNEMVRRIDIIPPSLALAQA
                     AEESGWGTSRFALEGNAIFGQWTFSNKASLKPQKRDDDKDHRVRAFTSLMDAVEAYIF
                     NLNTHRAYRQFRQERLALRARGQRLTGTGLASTLSSYSERGSKYVRTIQSIITGNQLQ
                     SLDKARLGGKKVSVVNKPVI"
BASE COUNT          357 a          337 c          326 g          341 t
ORIGIN      
        1 cggcttcaaa tcccgagcgc aacaaatatg agctgaaaaa atcgaaagcg aggatggttg
       61 cagaactggg caaggcaccg gaaatgtttg cctatccctt tggtgaagcc agtaagcaag
      121 tccaaaaact ggtgcaaaag aacggctaca attttgcctt tggtcagcat tccggtgtcg
      181 tcaattcaac aaccaacatc aattacattc cccgtttcgc cttgaataag aattatgatg
      241 atatgagacg cctgcgtctg gtgttaaacg ccctgccgtt gtcggtaaca aacatcacgc
      301 ccgccgatcc tctgcttatt accaataatc ctcccaattt gggctttact attacatcaa
      361 caaaaaacaa tctccaccgg ctgtcgtgtt tttcatccag tgaaggacgg gttcaggtcg
      421 agcgttttag cggtttaaaa ggcgccacac gcatcgagat acgtatgacc agcgcgttcc
      481 caaaagggcg cactcgaatt aactgtacct tacccggtcc cgataacagg tggcactggt
      541 ttggcacgct gttcgtcgtg ctgaaataac attcttcaat atttagagag tgaaaccctt
      601 aaataacggg cttatttaca acgctgacct ttttgccgcc aagccgcgct ttatccagac
      661 tttgcaactg attgccggtg attatggact gaattgtgcg gacatatttg ctgccccgct
      721 cggaataact ggacagggtg ctggcgagcc cggttccggt cagacgttgg ccgcgagctc
      781 gcaatgccaa acgttcttgg cggaattggc gataggcgcg atgggtattg agattgaaga
      841 tatatgcttc gaccgcatcc atcagggacg taaaggcgcg aacccggtgg tctttatcgt
      901 cgtcccgttt ttgcggtttt agcgatgctt tatttgaaaa agtccattgg ccaaatatgg
      961 cattaccttc gagagcaaag cgggacgttc cccagccact ttcttcagcg gcctgagcaa
     1021 gcgccaaaga cggtggaata atatcgatgc ggcgcaccat ttcattcaaa tcataacggt
     1081 cgacatcata gcgctcagcc atggctgcca gccaaagacg atcagccaca gtaattttac
     1141 cggttttatt tttcgtcgtc cggatgcgca agacacgctg gcgatctttc aaaatgtcat
     1201 cattggcttt gagcaccagt ggcaacactg ttttaaagaa tatacgtttg cgttccgccg
     1261 gcactcgaat gtgcagcata tcttgcggga tggtgacaac aaagatacgc ggcacggaag
     1321 caccttcatc aagcacaata aaaaagagtt agctttgaat g
//
LOCUS       DASCNL010000958         1433 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001973700, whole genome shotgun sequence.
ACCESSION   DASCNL010000958 DASCNL010000000
VERSION     DASCNL010000958.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1433)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1433)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001973700"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(243..689)
                     /locus_tag="QF359_12545"
     CDS             complement(243..689)
                     /locus_tag="QF359_12545"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJO87783.1"
                     /translation="MPELPDWPNSLVTYRGIVLPKHCDHYGHLNVRYYAHFFDDGGFQ
                     MWGHAGIKLSDLTKDGMGAVVANISIDFIHEITAGQPIVIRGAWTKIGTKSLAHEQRL
                     FNADTGTHCASQTAVEVFFDMQKRQSAPMPEDIREKIRPLVSTPDA"
     gene            complement(701..1204)
                     /locus_tag="QF359_12550"
     CDS             complement(701..1204)
                     /locus_tag="QF359_12550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87784.1"
                     /translation="MAFFNATEQGFWRSFTAAILIAPLFALLLTIRYHVNEAGVSLLR
                     FTAIETIAYVVSWVAFPLLLFHLTDILGTGHRFVRYIVAYNWASVLQNLLYLPFALLV
                     EAHLVQGAGSTFFGIILLGLVLLYTWFVTRTALEVTNLLAAGLVMIDLVLSIFINTIT
                     QGMLRVQ"
BASE COUNT          438 a          324 c          346 g          325 t
ORIGIN      
        1 aaaagacgtc gaattatcca aatttattgc cgaatggaaa aaagcgcaga aaatgtacct
       61 atttttggag ttggtaagga agtagactgg cttcttatag agtaacgcaa tattacgtca
      121 ggtgcctcgg ccactctaaa agcgctgacc aacaaaggta aaaaaggtaa aggcaagaaa
      181 aagaaaaata gcgatactac tcctaagcaa aacggcgtca gttactggcg ccgttttttt
      241 gtctatgcgt caggagtgga caccaggggt ctaatttttt cgcggatgtc ctcaggcatg
      301 ggtgcggatt ggcgtttttg catatcaaaa aatacctcaa cggccgtttg actggcgcaa
      361 tgggtgccgg tatctgcgtt gaacagacgc tgttcatgag cgaggctctt agtgccgatt
      421 ttggtccaag cacctcgaat gacaatcggc tggcccgcgg taatttcgtg aataaaatcg
      481 atggagatgt tagcaacgac ggcccccatg ccatctttgg tgaggtcact tagtttgatg
      541 ccggcatggc cccacatctg gaaaccgcca tcgtcaaaaa aatgggcgta ataacgcacg
      601 ttcaaatggc cgtaatgatc acaatgttta ggtagcacaa tacctcggta agtgacgagt
      661 gaatttggcc aatcaggtaa ttccggcatt taactttcct ctattgtacg cgcagcatcc
      721 cttgggtgat ggtattaata aatatgctga gcacaagatc tatcataacc aatccggcgg
      781 ctaacagatt ggtgacttca agcgccgtgc gggtaacaaa ccaagtataa agcaagacca
      841 gcccaagcaa tataataccg aaaaatgttg aacccgcgcc ttgcaccaga tgtgcttcaa
      901 ccagcagggc aaagggtaaa taaagcagat tctgtaacac cgacgcccaa ttgtaggcga
      961 caatataacg gacgaaacga tggccagtgc caaggatatc ggtgaggtga aacagcagta
     1021 atgggaaagc aacccagcta acaacatagg caattgtctc gatggcggta aatcgaagaa
     1081 gcgaaacccc tgcctcatta acgtgataac ggatagtcaa tagcagagca aataacggtg
     1141 caatcaagat ggccgcggta aaagaacgcc aaaagccttg ctctgtcgcg ttaaaaaaag
     1201 ccatcccgct ggtatcgccg cgagctaaat gtaatgcgcc gtaaagtgat ctaataattt
     1261 cacttaaagg agccatttaa tttaactgct tttctcgaaa aagcgttcca gcaccgcggt
     1321 gtagatatcg gtcagcgcgg ccaaatcctg caccgcaata cattcgttag atttatgcat
     1381 ggtctggccg atcgggccaa actcagccac cggacagtaa tccttgataa agc
//
LOCUS       DASCNL010000959         1320 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001976141, whole genome shotgun sequence.
ACCESSION   DASCNL010000959 DASCNL010000000
VERSION     DASCNL010000959.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001976141"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="QF359_12555"
     CDS             complement(<1..238)
                     /locus_tag="QF359_12555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HJO87785.1"
                     /translation="MDEQSLIFKISTWILPIVLAVTLHEASHGWVAWKLGDDTAYAAG
                     RVTFNPLKHIDPFGTILLPLLLLFATGGRMSFGYA"
     gene            complement(238..1251)
                     /gene="nagZ"
                     /locus_tag="QF359_12560"
     CDS             complement(238..1251)
                     /gene="nagZ"
                     /locus_tag="QF359_12560"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HJO87786.1"
                     /translation="MPHSRALIFGCSGLELTVNEAEFFAETRPVGFILFTRNCNTPDQ
                     LRHLIHQLRDCINSENAPILIDQEGGRVARLRSPHWREPPAGQVFADLAVRNLDNALE
                     ALTLNVRLIGQELRELGINVDCLPVLDIPQDDADPVIGDRAYGKEPKQVAALGRAACE
                     ALLKEGVLPVIKHIPGHGRATVDSHKALPRVNTALAELSAVDFVTFKALADMPLAMTA
                     HVIYEAIDADRPATTSPRVVQEIIRGEIGFNGLVMSDDLSMQALAGSFAERTVATLNS
                     GCDLVLHCNGDMAEMQEIARAASELPIGAEEKMAKTLSLIERFETVDKDAVLARLGNL
                     LKS"
BASE COUNT          348 a          361 c          311 g          300 t
ORIGIN      
        1 tcgcatagcc aaatgacatc ctcccgccag tggcaaacaa caacaacaac ggtagcaaaa
       61 tcgtgccaaa tggatctata tgcttaagcg gattgaaggt aactcggccc gccgcataag
      121 ccgtatcatc gcccaacttc caggcgaccc agccgtgcga tgcctcatgc agagtgacgg
      181 ccaggacaat cggtaagatc caggtggata ttttaaaaat aagggattgt tcgtccatta
      241 tgatttcagt agattgccca gtcgtgcaag aaccgcgtcc ttatccacgg tttcaaaacg
      301 ctctatgagc gataatgttt tagccatttt ttcttctgcc cctataggca attccgaagc
      361 cgcacgagcg atttcttgca tttccgccat gtcgccattg caatgcagaa ctagatcaca
      421 gcctgaattc agagtggcaa ccgtccgttc ggcaaaactt ccagccaagg cctgcattga
      481 taaatcatcg gacattacaa gaccattaaa accgatctcg ccccgaataa tctcctgcac
      541 cacgcgcggc gacgtcgttg ccggccgatc ggcgtcaatc gcttcataaa taacatgcgc
      601 cgtcatcgcg agcggcatgt cagcaagagc tttaaaagtc acaaaatcca ccgctgacag
      661 ttccgctaat gcggtattga cccgcggcag agctttgtgg ctatcaacgg tggcgcggcc
      721 atgcccgggt atatgcttga tcaccggcag caccccttct ttaagcagtg cctcacacgc
      781 cgcccgtccc aacgccgcca cttgtttagg ctctttgcca taagcgcggt caccgatgac
      841 aggatcagca tcgtcttgcg gaatatccag tacgggcagg cagtcgacat tgatgccaag
      901 ctcgcgtaac tcctggccaa tcaaccggac atttaaagtt aaagcctcaa gcgcgttatc
      961 taaattgcgg accgccagat cagcaaacac ctgccctgcc ggaggttcgc gccaatgggg
     1021 tgatcggagt cgagcgacac ggccaccttc ctgatcaatc aagatcggcg cattttcgct
     1081 attaatgcaa tcgcgaagtt ggtggatgag atggcgaagc tgatcaggtg tattacaatt
     1141 tcgggtaaat aggataaacc cgacgggtct ggtttcggca aaaaactcag cttcatttac
     1201 ggtcagctca agaccactac aaccaaaaat taaggcacga gaatggggca ttttatctgc
     1261 tgggtcgaat gacaaaacag ttaactttta atttagccag cgactggcaa atctttttgg
//
LOCUS       DASCNL010000960         1458 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001976906, whole genome shotgun sequence.
ACCESSION   DASCNL010000960 DASCNL010000000
VERSION     DASCNL010000960.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1458)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1458)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1458
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001976906"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..976
                     /locus_tag="QF359_12565"
     CDS             <1..976
                     /locus_tag="QF359_12565"
                     /inference="COORDINATES: protein motif:HMM:NF021653.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HJO87787.1"
                     /translation="DYAQSTEGKIIRTRAQAVAEEILKNEAEALSNTWLDIEAARQTM
                     KPPACVHKAPDAITKYLMDKGDPAWQRIVIDDRATMGRLVDFWTELVPELLELIEPAE
                     DKVALLETHNLDQQIDDLLQTLVSLPSGGQLIIEETAALVAIDVDSGAHRRDRDPETF
                     ALAINAEAAREIARQVLLRNLSGQIVIDMLPLKRRENRDNIQNTLAEALAEDGANCNI
                     FGFSRLGNLEMTRRRMGKSLAQRFLAKTASEISPESTALGIIRAVLRELDRNPGKSLT
                     VRCSADLHALLMNGVSAAWHSLLERTGPVVILEKSADLTATQFDLRIN"
     gene            991..1200
                     /gene="yacG"
                     /locus_tag="QF359_12570"
     CDS             991..1200
                     /gene="yacG"
                     /locus_tag="QF359_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HJO87788.1"
                     /translation="MATSKPTKNNGKRECPNCGQPTMPKFRPFCSARCSQLDLSNWLN
                     EDYRVPVVEIDDFDEDDFPDEEFEN"
BASE COUNT          406 a          327 c          384 g          341 t
ORIGIN      
        1 tgactatgcg cagtccacag agggtaagat cattcgaaca cgtgcccaag ctgtcgcgga
       61 agaaatattg aaaaacgaag ccgaagcttt gtctaacact tggctagata ttgaggcggc
      121 acggcaaacc atgaagccac cggcttgtgt acacaaggca cccgacgcaa taacaaaata
      181 tctaatggat aaaggcgatc cggcatggca acgcatcgtc attgatgatc gagcaaccat
      241 gggccggttg gtagattttt ggacagaatt agtgccggag ctattggaat tgattgaacc
      301 ggcggaagat aaggtcgcac tgctggaaac tcacaatttg gaccagcaaa tagatgatct
      361 gctgcaaacc cttgtcagtc tgccatccgg cggacaatta atcatcgaag aaaccgcggc
      421 tttggtggcg attgatgttg atagcggcgc gcatagacgt gaccgagatc ctgaaacatt
      481 tgctctcgcc attaatgcag aggcggctcg ggaaatcgcc cggcaggtat tgttgagaaa
      541 tttatccggc cagatcgtaa tcgatatgct gccactgaaa cgccgggaaa acagagacaa
      601 tattcaaaac accttggcag aagcgttggc tgaggatggc gccaattgca atatttttgg
      661 ctttagccgg ttgggcaatt tggaaatgac ccggcggcgg atggggaaaa gcctagccca
      721 gaggtttctg gctaaaactg cctcagaaat ctcacccgaa agcacggcct taggcatcat
      781 ccgagcggtg ttaagagagc ttgatcgtaa tcccggcaag tctttgacgg ttcgatgtag
      841 tgccgattta cacgcattat taatgaacgg cgtgtcagcg gcctggcaca gcctgcttga
      901 acgcaccggc ccggttgtca tattagagaa atcagccgat ttaacagcga cgcaatttga
      961 tctgcggata aattgattta gagatgagaa atggcgacca gtaagccaac taaaaataat
     1021 ggtaaacgcg aatgcccaaa ttgtggccaa ccgaccatgc ctaaattccg gccattctgt
     1081 tcggcccgct gctcgcagct tgatctctca aattggctaa atgaagatta ccgcgtaccg
     1141 gttgttgaaa ttgacgattt tgacgaagat gactttcctg atgaggaatt tgaaaattag
     1201 tttacaggcg tgatccctac aagcacgttg gtgcgattag gagtagccgc aatggtaaag
     1261 ttgtactcgg tggcgaaacc attgctgaaa gctcaaatgt aacctttgtc ttcgagaccg
     1321 gaatgtcgac ccgttattat ttgccgatgg atgatatccg gatgacagca ctgacacgct
     1381 cggaaacaac aacgcgatgt ccctataaag gtatcaccag ttactggtcg gtcgaagctg
     1441 gtggactggt ttttgatg
//
LOCUS       DASCNL010000961         1477 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001978167, whole genome shotgun sequence.
ACCESSION   DASCNL010000961 DASCNL010000000
VERSION     DASCNL010000961.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1477)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1477)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001978167"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1477)
                     /locus_tag="QF359_12575"
     CDS             complement(<1..>1477)
                     /locus_tag="QF359_12575"
                     /inference="COORDINATES: protein motif:HMM:NF014717.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HJO87789.1"
                     /translation="KNHRAHFQATGKSSEAIEMRAMAKDTKPAGKRTLVELKAVDNAY
                     PLVGSMALKNGLVLTDALKKQNGLWGAVAESNLLTKLKLRIGDTIKVGESKFHLTGII
                     EKEPDRVANVLSFGPRLMISSAGLAATELVQPGSQIRYRYRVVLPEDQSASTWSENLK
                     LKFPKAGWRIRNTEQAAPGLQRFIDRMSLFLSFVGLTTLLVGGVGVSNAVASYLDSKV
                     KVIATYKCLGAASGLVFRIYFLQIAALAGLGILIGLLFGAIVPIISIVALEGVLPVNP
                     EPGLYPLPLITATVFGALIALTFALWPLARAREIPAANLFRDKVQPAHIKPKRKFQFA
                     VILGGLLLAALTIATANDRWFAIWFVAGTGLALILLRGAVSLLTYYAKKITGVKNTEL
                     RLALSNLYRPGAVTPSIVLSLGLGLAVLIAIALIEGNLSRQVKERLPVMAPAFFFIDI
                     QPGQTTRFDQTVTGVPGTGDYKRVASLRGRIVKIAGVPVEQV"
BASE COUNT          369 a          393 c          393 g          322 t
ORIGIN      
        1 gacctgctca accggcaccc cggcaatttt gacgatgcgg cctctgagcg aggcgacgcg
       61 tttataatcg ccggtaccgg gaacaccggt gacggtctga tcaaagcggg tggtctggcc
      121 cggctgaata tcgatgaaga aaaacgccgg cgccatcact ggcagccgtt cttttacctg
      181 gcggctgaga ttgccctcga tcagcgcaat ggcgatcaag acggcgagac caagtcccaa
      241 tgataagaca atgctggggg tcacagcacc cgggcggtac aggttcgaga gcgccaagcg
      301 caattcggta tttttaacac cggtgatttt ttttgcataa taagtgagta aacttacggc
      361 accgcgtaat agtatcagcg ccaaccccgt tccggcgaca aaccagatgg cgaaccaacg
      421 gtcattggcg gtggcaatgg ttagcgccgc cagcagcaat ccgccgagaa ttacagcgaa
      481 ttggaactta cgttttggct taatatgggc gggctgaact ttgtctctga acaaattggc
      541 tgccgggatt tcccgcgccc gggccaacgg ccagagcgca aaggtcagag cgatcagggc
      601 gccaaaaaca gtcgccgtga tcagcggcaa tggatagaga ccaggctcag gattaaccgg
      661 caacacgccc tccaaggcga cgatagagat aattggcaca attgcgccaa acaacagccc
      721 gattaaaata ccgagtccgg ccagcgcggc aatttgcaaa aaataaatcc gaaacaccaa
      781 accgctagca gcgcccaggc atttataggt cgctatcacc ttgaccttgc tgtcaagata
      841 actcgcaacc gcgttgctga caccaacacc gccgaccagc aaagttgtca ggccaacaaa
      901 ggacaaaaac agagacatgc gatcgataaa gcgctgcaag ccgggggcag cttgctcggt
      961 atttcgtatg cgccagccgg cttttggaaa ttttaatttg aggttttcgc tccaggtgct
     1021 ggcactttga tcttccggca aaacaacgcg gtagcggtat cggatctgac tgccgggctg
     1081 caccaattcg gtagcggcca ggccagccga tgaaatcatc aaccgcggac caaagctcaa
     1141 gacattggcg acccggtcag gttctttttc aatgatgccg gtaagatgga atttgctctc
     1201 gccaactttg atggtatcgc cgattctgag tttcaattta gtcaggagat tactttcggc
     1261 gacggctccc cacaaaccat tttgtttttt aagagcgtca gttaacacca gcccgttttt
     1321 gagcgccatg ctgccaacca aaggataggc gttgtcgacg gctttaagtt caaccaatgt
     1381 gcgtttaccg gcaggtttgg tgtctttcgc catcgctcgc atttcaattg cttcggagct
     1441 tttgccggtg gcttggaaat gtgcccgatg attttta
//
LOCUS       DASCNL010000962         1853 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001978893, whole genome shotgun sequence.
ACCESSION   DASCNL010000962 DASCNL010000000
VERSION     DASCNL010000962.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001978893"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="QF359_12580"
     CDS             complement(<1..242)
                     /locus_tag="QF359_12580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HJO87790.1"
                     /translation="MSDKKLPTKTSSEDVQAFLQKVVATPVRKASSEKGRLIFAMDAT
                     ASREPSWDRACHLQGEMFQETAAMGGLEIQLAYYRG"
     gene            complement(364..1368)
                     /locus_tag="QF359_12585"
     CDS             complement(364..1368)
                     /locus_tag="QF359_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3179 domain-containing protein"
                     /protein_id="HJO87791.1"
                     /translation="MLFILNVQIRQTLGLSVVAGIVFLVSSSAAMANPSFWKFEWPRT
                     DFKKTSVEYGEIMSGGPPKDGIPSIDNPRFTDVSKVKRLKSTVPVISFTLNGESKAYP
                     LGVLMRHEIVNDRVGGVHVAVTYCPLCNAAIVFDAKLDGKVLDFGTTGKLRNSDLVMY
                     DRQTESWWQQFLGEGIVGSMTGKKLKMLPSRIEAFGRYKKAHPNGKVLLSAFPGRGFG
                     GNPYVGYDGSPHPFLYRGPLPSGIPALMRVVAVGDEAWSIALLRQKKRIEVGDLVLTW
                     EAGQNSALDTRDISKGKDVGNVVVKRKTGSGLVDAVHDVTFAFTFHAFKPKGKLHHTK
                     "
     gene            1516..>1853
                     /locus_tag="QF359_12590"
     CDS             1516..>1853
                     /locus_tag="QF359_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO87792.1"
                     /translation="MSTAEKIECAVIGAGVIGLAVARALALQGREVIILESEDAIGLG
                     TSSRNSEVIHAGIYYDTGSLKAELCVQGKLALYDYCESHGVTHQRCGKMIVAVHDGQL
                     EKLEALQQKA"
BASE COUNT          484 a          484 c          426 g          459 t
ORIGIN      
        1 aacccgcggt aataagcaag ctggatttcc aggccaccca tcgccgccgt ttcctgaaac
       61 atctcacctt gcaaatggca ggcgcgatcc cagctcggct ctcggctggc cgttgcatcc
      121 atggcaaaga taagacggcc tttctcactc gacgccttgc gcacaggcgt tgccacaact
      181 ttctgcaaaa aagcctgaac atcctcgctg gatgtttttg tcggcagctt tttatcgctc
      241 atacaactcc caatctacct cgccggtata cttcttgaga tatgccaaaa attaaccaag
      301 acaagagtct aaccttgccc cggtccgaaa acaacatttc acctgtttag attggagagt
      361 gctctatttg gtgtgatgta attttccttt tggtttaaag gcatggaagg taaaagcgaa
      421 agtgacatca tgtactgcat cgaccaagcc actaccggtc ttgcgcttga caacgacatt
      481 accaacatct ttacccttag atatatcgcg ggtatcgagc gccgagtttt gcccggcctc
      541 ccaagtcaaa accaaatcac cgacttcaat gcgttttttc tggcgcagca gagcaatgct
      601 ccaggcttcg tcaccaacgg caacgacgcg catcagagcg ggaatgccgc tcggcagtgg
      661 tccccgataa aggaatggat gaggggaacc atcatagcca acatacgggt tgccgccgaa
      721 gcctcggccc ggaaacgctg agagtaatac tttaccgttc ggatgggctt ttttgtagcg
      781 cccgaaagct tcaattcgtg atggcagcat tttcaacttc ttgccggtca tggaaccaac
      841 aattccttca cccaggaatt gctgccacca gctttctgtt tggcggtcat acatgacgag
      901 atctgagtta cgtaatttac cagtggtgcc aaaatccaat actttgccat caagcttagc
      961 atcaaaaaca atcgcagcat tacaaagcgg acaataagtc accgctacgt ggacaccacc
     1021 taccctgtca ttaacgatct cgtggcgcat caaaaccccc agcggataag cctttgattc
     1081 gccgttgagg gtaaaactga taaccggcac agtcgatttc agcctcttga ccttactcac
     1141 atcggtaaat ctaggattgt cgattgaggg gataccgtct ttcggtgggc cccccgacat
     1201 gatttcgcca tattcaacag aagttttttt gaaatccgtc cttggccatt caaatttcca
     1261 gaacgatgga ttagccatcg cggcactgga tgagaccaaa aacacgatac ccgctacgac
     1321 gctcaaaccg agtgtctggc ggatttgcac gttaagtata aagagcattt tcatcatggt
     1381 acataagtgg cacaactcca ttaaaggcgc aattcacgtc ggttcacatc tcgtgacatg
     1441 gttaagccat cgcaatctaa gagtaatctt ataaagtctt tttttctccg cgtttctgat
     1501 ttattgaact tagccatgtc gacagcagaa aaaatagaat gcgctgtgat cggtgccggt
     1561 gttattggct tagcagtagc ccgggcactc gccttgcagg gccgagaagt cattatcttg
     1621 gaatcagaag acgccattgg cttgggcacc agctcgcgca atagcgaggt tattcatgcc
     1681 ggcatttatt atgataccgg tagccttaaa gccgaacttt gcgtccaagg taaactggct
     1741 ctttatgatt attgcgaaag ccacggagtc actcatcagc ggtgcggtaa aatgatcgtc
     1801 gccgtgcatg acgggcaatt ggagaaactc gaagcgctgc agcaaaaggc gga
//
LOCUS       DASCNL010000963         2483 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001979885, whole genome shotgun sequence.
ACCESSION   DASCNL010000963 DASCNL010000000
VERSION     DASCNL010000963.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001979885"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(104..883)
                     /locus_tag="QF359_12595"
     CDS             complement(104..883)
                     /locus_tag="QF359_12595"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HJO87793.1"
                     /translation="MQLPSKIIDISMLLDNETVSDPPVMRPNIEYKTGEDNAEMVCKF
                     FPGLTTDQLPDGQGWSWERINLVTHNGTHLDAPYHYHTHDIYGARMLTIDEIPLDWCF
                     RPGVKLDFRHLEDGHVVTAEEVEAELGRIGHNLQQFDIVLVNTRASECYGTDEFMTAG
                     IGMGRDATVYLTDRGVKITGIDAWGWDAPFHHMAQNWQAMQDPSIIWEGHYAGMENQY
                     CHLEKLQHLEKLPASGFYVACFPCKIKDASAGWTRAVAMFD"
     gene            complement(981..1667)
                     /gene="trmB"
                     /locus_tag="QF359_12600"
     CDS             complement(981..1667)
                     /gene="trmB"
                     /locus_tag="QF359_12600"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HJO87794.1"
                     /translation="MGKNKNSVPDNPQFYGRRKGHALRPHRQLLMNELLSKVQVSSEG
                     NYVLDASEIWLEIGFGAGEHLAAQAESHPDIGFIGCEPYVNGVATLLSVIEQKKLTNI
                     RIFSDDARLLLTKLKQATISKVFVLFSDPWPKKRHNRRRFITPENLTTLSYIMKDQAE
                     LRFATDDMNYVRWALDAFYQHPDFNWQDQRPGDWSNRYADAVPTRYETKAVKQGKKNV
                     YLTFRRRTRT"
     gene            complement(1687..>2483)
                     /gene="metK"
                     /locus_tag="QF359_12605"
     CDS             complement(1687..>2483)
                     /gene="metK"
                     /locus_tag="QF359_12605"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HJO87795.1"
                     /translation="IMFGYACRETDVLMPSPIHYSHEILEVLAKARHSGEAAGLGPDS
                     KSQLTLKYENGKPVGATSVVVSTQHSADLDQAEVKEIVRPYVEQVLPDGWMCPEDEFY
                     VNPTGLFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDPTKVDRSAAYAARYL
                     AKNVVAAELAEKCTIQLAYVIGVSKPLSVYVDTAGTGSVDEDKLSAALQEVMDLSPRG
                     IREHLQLSRPIYARSAAYGHFGRMPDDDGGFSWEKTDLVEPLKTAL"
BASE COUNT          621 a          644 c          581 g          637 t
ORIGIN      
        1 ctcagaattc cgatatattt ggatatgtct aagaacgtgg tgcattctct ctctcagaag
       61 cgaaaaatac aagctttttt atcaatttaa ggttttcagc agtttagtca aacatcgcca
      121 ccgctcgtgt ccaacccgct gaagcgtcct taatcttaca ggggaaacag gcgacataga
      181 aaccgctcgc tggcagtttc tccagatgct gaagtttctc gagatggcaa tattgatttt
      241 ccataccggc gtaatggcct tcccaaatga ttgatggatc ttgcattgcc tgccaatttt
      301 gagccatgtg atgaaacggt gcatcccagc cccaggcatc aatcccagtt attttgacgc
      361 cgcggtcggt taaataaacg gtcgcgtcac ggcccatacc aattccggcc gtcataaact
      421 catcggtgcc atagcattca ctggccctgg tgttaacgag gacaatatca aactgctgga
      481 gattgtgacc gatgcggccg agctcggctt caacttcttc ggccgtaacc acatggccgt
      541 cctccaggtg cctgaaatcg agcttaaccc cgggccggaa acaccaatcg agggggattt
      601 catcaatcgt cagcatacga gcgccgtata tatcatgggt gtgataatga tagggtgcat
      661 caagatgggt gccgttgtgg gtgaccagat ttatccgttc ccatgaccac ccttgaccat
      721 ccggcagttg atccgtggtc aagccgggga aaaacttgca gaccatttca gcgttatctt
      781 cgcccgtctt atattcaata tttggccgca tcaccggcgg gtctgaaacg gtttcattgt
      841 cgagcagcat tgaaatatcg atgattttag acggcagttg catgatttac cctccacatt
      901 atttttttag cggcttgatc atccaatatg gaccaacacg ttgcaacaac attgattaac
      961 atcgaaagat gtatatcacc ttatgtacgg gtacggcgcc gaaaagtcag ataaacgttt
     1021 ttttttccct gctttaccgc tttggtttcg tagcgggttg ggaccgcatc cgcataacga
     1081 ttactccaat ccccgggcct ttggtcctgc caattgaagt cagggtgttg ataaaaagca
     1141 tcaagcgccc atcgaacata attcatatcg tcggtggcga agcgcaattc agcctggtcc
     1201 ttcataatat acgacagcgt ggttaaattt tctggcgtga taaagcgccg gcgattatgc
     1261 cgctttttcg gccaagggtc ggaaaacaat acgaatactt tgctgattgt cgcttgcttt
     1321 aatttggtca acagcaagcg ggcatcatca ctgaatatgc ggatattggt aagttttttc
     1381 tgctcaatca ccgaaagcag tgtggcgacc ccattaacgt aaggctcaca gcctataaat
     1441 ccaatatcgg gatgactctc tgcttgtgcg gccaaatgct cgccggcgcc gaagccaatt
     1501 tccagccaaa tttccgaggc atcgagtacg taattaccct cagatgatac ctgcacctta
     1561 gacagtaatt cgttcatcag aagctggcgg tgcggcctta acgcgtggcc tttgcggcgg
     1621 ccataaaatt ggggattatc gggaacagag tttttattct tgcccatcgc ccaactgaaa
     1681 aaatccttaa agcgcagtct taagcggttc aaccaaatcg gttttttccc aactaaaccc
     1741 accatcgtca tcgggcatcc ggccaaagtg accataagcc gccgagcgag cataaatcgg
     1801 ccggctcaat tgaaggtgct cgcgaattcc acgcgggctc aaatccatca cttcttgtaa
     1861 ggccgccgat aatttatctt cgtcaacact gccggtgccg gcagtatcaa cataaactga
     1921 tagcggcttc gagacgccaa tcacataagc taattggatg gtgcatttct cggccaattc
     1981 cgcagcgacc acattttttg ccaaataacg tgcggcatag gcagccgagc ggtcaacttt
     2041 ggttggatct ttaccggaaa aggcgccgcc gccgtggggt gctgcgccgc cataggtatc
     2101 aacaatgatt ttccgtcccg tcagcccggc gtcaccatca ggcccgccga tgacgaacaa
     2161 gccagttgga ttaacataaa attcgtcctc tgggcacatc cagccatctg gtaagacttg
     2221 ctcaacataa ggacggacaa tttctttgac ttccgcctga tccaaatcgg cactatgctg
     2281 agtagataca acgaccgagg ttgcgccgac tggtttacca ttttcatatt ttaaggtgag
     2341 ctggcttttg gaatccggac ccaatccggc tgcttcgccc gaatgacggg ctttggcgag
     2401 aacttccaga atttcatgtg agtagtgaat cggcgacggc atcaaaacat ctgtttcccg
     2461 gcacgcatag ccgaacatga ttc
//
LOCUS       DASCNL010000964         1857 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001985159, whole genome shotgun sequence.
ACCESSION   DASCNL010000964 DASCNL010000000
VERSION     DASCNL010000964.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001985159"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1747
                     /locus_tag="QF359_12610"
     CDS             <1..1747
                     /locus_tag="QF359_12610"
                     /inference="COORDINATES: protein motif:HMM:NF014805.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJO87796.1"
                     /translation="ITFIGPKPDAMRVMGDKIESKLFAEKAGVPTVPGHAEPVKSAAD
                     AKKIAKKISYPVILKASAGGGGKGMRMVESADDIEESLRASTAEAENSFGDGRVFVEK
                     FISNPRHIEIQVLADSHGNCVHLGERECSIQRRHQKVIEEAPSPFVDDAMRAEMGAHA
                     ITLAKAVNYQSVGTVEFIVDADKNLYFLEMNTRLQVEHPVTELITGLDLVEQMIKVAA
                     GEELEFNQEEVNLNGWAMESRLYAEDPTRGFLPAIGRLVEYREPVTGVFGTSKNVRVD
                     GGVNEGDEITRFYDPMIAKLITNGETRKEAIKHMQRALEEYYVRGVDNNLSFLSAVMA
                     HPRFIEGALTTNFIFEEFGERFIPEETAHEDFGMLAAIVAMMHCREIERDNQITGRAV
                     SGAALSREKFAYGDEWMAMVNGESHPIRIAVVDDQKVEIHAGGQNYVIYSEWRPGRSL
                     FTGQVNDDDICMQVERTGTGFKVRHAGYQGEIRIMSSFAAELLNRMPAKQVTDTSKQL
                     ISPMPGLLVSVEVEIGQEVERGEALAVVEAMKMENQLFAERAGVVAKIYLEPGDSLEV
                     GQIILELALSEENLL"
BASE COUNT          470 a          411 c          536 g          440 t
ORIGIN      
        1 cattacgttt attggcccaa agccggatgc tatgcgggtg atgggcgaca agatcgaatc
       61 caaactgttt gctgaaaaag ccggcgtgcc gacggtgccg ggacatgccg agccggttaa
      121 aagtgcagcg gacgccaaaa aaatagccaa gaaaatcagc tatccggtca ttctcaaagc
      181 ctcagccgga ggtggcggca aaggcatgcg gatggtcgaa agtgcggatg acatcgaaga
      241 aagtttgcgt gcctctaccg ccgaagccga aaacagtttt ggtgatggcc gcgtttttgt
      301 cgagaaattc atttccaacc cgcgtcacat tgaaattcag gtgctggctg acagccatgg
      361 taattgtgtt catctcggtg agcgggaatg ttcgatccaa cgccgccatc agaaagttat
      421 cgaagaagca cctagcccgt ttgtcgatga tgccatgcgg gcggaaatgg gcgcacatgc
      481 aattaccctt gccaaggcgg taaattatca atccgtcggc acggtcgagt ttattgtcga
      541 tgcagacaag aatttatatt tcctcgaaat gaacacgcgc ctccaagttg agcatccggt
      601 gacggaactc attaccggtc tcgatctggt tgagcagatg atcaaagtgg cggcaggcga
      661 agaactcgaa tttaaccagg aagaggtaaa cttaaatggc tgggcgatgg aatcacgcct
      721 ttacgccgaa gatccaaccc ggggattctt gccggcgatt ggccggttgg ttgagtatcg
      781 cgagccggta actggcgtgt tcggcaccag caagaatgtc cgcgttgatg gcggtgtcaa
      841 tgaaggcgac gaaattacgc gcttttatga tccaatgatc gccaagctca tcaccaatgg
      901 tgagacgcgg aaggaagcca tcaaacatat gcagcgggca cttgaagaat attatgttag
      961 aggcgttgat aataatctta gttttctgtc ggcagtgatg gctcacccgc gctttatcga
     1021 aggcgctctg acgacgaact ttatttttga agaatttggc gagcgtttta ttccggaaga
     1081 gaccgcgcat gaagatttcg gcatgctggc ggcgattgtc gcgatgatgc actgccggga
     1141 gattgagcgc gataatcaaa ttaccgggcg ggcggtgtct ggtgcggcat tgtcgcgaga
     1201 gaaatttgcc tatggtgatg aatggatggc aatggtcaat ggcgaaagcc atcccattcg
     1261 tattgctgtt gtagatgatc agaaagttga aattcatgcc ggtggccaaa actatgtaat
     1321 atattccgag tggcggcctg gccgttcgtt gttcactggt caggtcaatg acgatgacat
     1381 ttgtatgcag gtggagcgga ccggtacagg atttaaggtg cgccatgccg gctatcaggg
     1441 tgaaatacgc atcatgtcgt cctttgccgc cgaactgctc aaccggatgc cggctaagca
     1501 ggtgaccgat acgtcgaaac aactgatctc gccgatgccg ggactgctgg tttcggttga
     1561 agtcgaaatt ggccaagagg tcgaaagagg tgaagcgctg gctgtggttg aagcgatgaa
     1621 aatggaaaac cagctttttg ccgagcgtgc cggtgtggtg gcaaaaattt atctcgaacc
     1681 cggtgatagc cttgaggttg gccagatcat tctcgagctg gcactgtcag aggaaaacct
     1741 actttgacgt cgatcgacta aatccataga gtttgtggat gaaaaatcac aatcccttcc
     1801 gctattttaa gacgtcgccg gagataattc gtctcgctgt gatgatgtat gtcagat
//
LOCUS       DASCNL010000965         1730 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001986038, whole genome shotgun sequence.
ACCESSION   DASCNL010000965 DASCNL010000000
VERSION     DASCNL010000965.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001986038"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1730
                     /locus_tag="QF359_12615"
     CDS             <1..>1730
                     /locus_tag="QF359_12615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HJO87797.1"
                     /translation="QVIPLAEVEEVDLYHAHHWITKYVFCQDAKVIAIQYSATAILIG
                     LVGLVLSWLMRLQLGFPEVFDFIDAESYYQYVTMHGMIMVIYLLTALFLGGFGNYLIP
                     LMVGARDMVFPYMNMLSYWVYLLAVIVLTVSFFVPGGASGAGWTLYPPQAISEGTPGI
                     DGGIILMLISLVLFIIGFTMGGLNYVVTVLQARARGMTLMRMPLTVWGIFVATILALL
                     AFPALFVAGVMMLLDRVLGTSFFMPEMIVQGEMTSHENGSPLLFQHLFWFFGHPEVYI
                     VALPAFGVVSDIISTHARKNIFGYRMMVWAIVAIGGLSFIVWAHHMYVSGMNPYFGFF
                     FATTTLIIAVPTALKVYNWVLTLWKGNIHLSIPMLFCVAFILTFINGGITGLFLGNVI
                     VDIPLSDTMFVVAHFHMVMGIAPILVIYAAIYHWFPKMSGRMLHEGWGQFHFWVTFLG
                     SYLIYFPMHYLGFIGVPRRYFEIGETSFIPPSSVTLNEFITVMVLIVGFAQVVFMANI
                     IISIFKGKPAGSNPWNATSLEWQTAETPPGHGNFGDELPVVYRWAYAYSMPGVEADFV
                     PQNMPPDQVRR"
BASE COUNT          341 a          392 c          452 g          545 t
ORIGIN      
        1 caagtaatcc cgttggcgga agttgaagag gtcgatctct atcacgctca tcattggatt
       61 acgaaatatg tcttttgcca agacgccaag gtaattgcca ttcaatattc ggcgacggcg
      121 atcttgatcg gtcttgtggg tctggtgttg tcgtggttga tgcgattgca gttgggattt
      181 cctgaagttt tcgatttcat tgatgccgag agctactatc aatacgtcac catgcacggc
      241 atgatcatgg ttatttacct gctaacagcg ctgttcctgg gcggatttgg caattatttg
      301 atcccgttga tggtcggtgc ccgtgacatg gtcttcccct atatgaacat gctgagctac
      361 tgggtttatc tgttggctgt gattgtgttg acggtgagtt ttttcgtgcc tggtggcgct
      421 tcgggtgccg gctggacgct ctatccgccg caggcaattt ctgaaggcac gcccggaata
      481 gatggcggca tcatattgat gctgatctca ttggtcctgt ttattatcgg atttacgatg
      541 ggcggtctga actatgtggt gaccgtgctg caagcccgcg cccgcggcat gacgttgatg
      601 cgtatgccgt tgaccgtttg gggcatcttc gtcgcaacga ttttggcttt gctcgctttt
      661 ccagcgctat ttgtggctgg tgtcatgatg cttttggacc gagtactagg caccagtttc
      721 tttatgccgg aaatgattgt gcaaggtgaa atgacgagcc atgaaaatgg cagcccgcta
      781 ttgttccaac atttgttctg gttctttggc catccagaag tttacatcgt cgccttgccg
      841 gcctttggcg ttgtttccga tattatcagc actcatgccc gcaaaaatat ttttggctat
      901 cggatgatgg tctgggccat tgttgccatt ggcggtttga gctttatcgt ttgggcacac
      961 cacatgtatg tcagcggcat gaatccttat ttcggtttct ttttcgcaac aaccacattg
     1021 atcattgccg taccgaccgc tctaaaggtt tataattggg tgctgacgtt gtggaagggt
     1081 aacattcatc tcagtatacc gatgttattc tgtgtcgctt tcattcttac ctttattaat
     1141 ggcggtatta ccggactgtt tctcggtaat gtcatcgtcg atattccttt gtcggacacg
     1201 atgtttgtgg tcgcccactt ccatatggtg atgggcattg cgccgatatt ggtaatttac
     1261 gctgctattt atcattggtt ccccaaaatg tcgggacgca tgctgcacga aggctggggc
     1321 caatttcact tttgggtcac tttcctcggc agttatctga tctactttcc aatgcattat
     1381 cttgggttta ttggcgtgcc gcgccgctat tttgagatcg gtgaaacttc tttcatacca
     1441 ccatcttctg tgacgcttaa tgagttcatc actgttatgg tattgatcgt tggctttgcc
     1501 caggttgtgt ttatggcaaa tataattatt agcatattta agggcaaacc ggcgggcagc
     1561 aatccgtgga atgccacatc gctggaatgg caaacagcag aaacaccgcc gggtcacggg
     1621 aactttggcg acgaattgcc ggtcgtctac cgttgggcct atgcctacag catgccgggc
     1681 gttgaggcgg atttcgtgcc gcaaaatatg ccaccggacc aagttaggcg
//
LOCUS       DASCNL010000966         2059 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001991234, whole genome shotgun sequence.
ACCESSION   DASCNL010000966 DASCNL010000000
VERSION     DASCNL010000966.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001991234"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(281..357)
                     /locus_tag="QF359_12620"
     tRNA            complement(281..357)
                     /locus_tag="QF359_12620"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(321..323),aa:Pro,seq:cgg)
     gene            complement(558..1577)
                     /locus_tag="QF359_12625"
     CDS             complement(558..1577)
                     /locus_tag="QF359_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HJO87798.1"
                     /translation="MGVVVNLESGPDLQSPSLDTLIDLTADDIKDVNTLIVHLMDSPV
                     ALIPQLAGYLVSAGGKRLRPMMTLASARMCGYDGERHKGLAACVEFIHTATLLHDDVV
                     DESSLRRGLASANAVWGNQASVLVGDFLFSRAFELMVTDGSLEVLAVLSQASSVIAEG
                     EVLQLMTTNDTETGETQYLEVIKSKTAQLFSAACRIGALVADRPKVEEDALETFGMNL
                     GITFQLIDDTLDYSAKQADLGKTIGDDFKEGKITLPVILAFRRGNDDERVFWQRKLED
                     LDQQDGDLEHAIELMVKHGALEDTVERARHYGAIARDAMGIFEDSHEKATLIDTIGFC
                     IHRAY"
     gene            1702..1944
                     /locus_tag="QF359_12630"
     CDS             1702..1944
                     /locus_tag="QF359_12630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HJO87799.1"
                     /translation="MVELLRTNDPVLISWLTAILAEANIEIMVFDAHTSILEGSANAI
                     RRRVMVIDDDFARAKQVFEAGIEKLEGGVSAYEYPE"
BASE COUNT          525 a          514 c          523 g          497 t
ORIGIN      
        1 ccaacccctg cagaacattg gtgcagaaag ttgggatgat aataatcgcc atcgcgtctt
       61 tgagaccaag cgttgcagtc agcaaagcca gggataccga tggcaggcca agcccgatca
      121 cacctttaac gaaaccggac atcaaaaacg tgagggtaat aattagtaga gtttcagttg
      181 atagcattgg cgactaacac gtggttttaa agctctccat agtgccgagt gcaccccgat
      241 aggtccagtc attcgtcgtg tcgatattat tttgaaaaaa tggtcgggaa gagaggattc
      301 gaacctccga ccccgtcgtc ccgaacgacg tgcgctacca ggctgcgcca cttcccgaca
      361 aagaattcca cgattattga ggatagataa aatttagtcg cgcctttgtg gcatggataa
      421 ccgcctcaat ttggattttg tatgccaaag ttgttgctga ttcaaacata tttccaatgc
      481 gttcaataaa aaatatgaca gctcaccacg cagttatcgt gcggcgattc ggggataatt
      541 aggctttcgg acgggcttta atacgcccta tgaatacaga aaccaatggt atctatgagc
      601 gtggcttttt cgtggctgtc ttcgaatatg cccatcgcgt cgcgggcaat cgcaccatag
      661 tggcgggcac gttccacggt atcttccaaa gcgccatgtt tgaccatgag ttcgatcgcg
      721 tgttcgagat caccgtcctg ctgatcgagg tcttcgagct tacgctgcca aaacactcgc
      781 tcatcatcgt tgccacggcg aaatgccagg ataaccggca gggtgatctt cccttccttg
      841 aaatcgtcac cgatagtttt gccaagatcg gcctgcttgg cggagtaatc cagcgtatcg
      901 tcgatcaact gaaaagtgat gccgagattc ataccaaaag tttcaagcgc gtcttcttcg
      961 actttaggcc ggtccgcgac cagcgcgcca atacgacagg cggctgagaa aagttgcgcg
     1021 gttttagact taatcacttc gagatattgg gtttcgccag tttcggtatc gttggtcgtc
     1081 atcagctgta aaacttcacc ttcggcaatc accgaagagg cttgggaaag cactgccagc
     1141 acttcaagag atccatcggt aaccatcagc tcaaaggcgc gggaaaacaa aaaatcacca
     1201 accaaaacac tggcctgatt gccccagacc gcattggctg aagcgaggcc gcgcctgagc
     1261 gagctttcgt caaccacatc atcatgcaaa agcgttgccg tatgaataaa ctctacacag
     1321 gcagcaaggc ctttgtggcg ctcgccgtca tagccgcaca ttcgggcaga cgccaaagtc
     1381 atcatcgggc gaaggcgttt gccaccagcg gaaacgagat aaccggcaag ctgcggaatg
     1441 agcgcgaccg ggctatccat caagtggacg atcagcgtat taacgtcttt gatgtcatcc
     1501 gcagtaaggt caatgagcgt atccaatgac ggactttgta gatccggacc actttctagg
     1561 tttacgacaa ctcccaaggg ctgaatttcc tttggtctga ttattttgtt aacgttgttt
     1621 cagcatagga ggctaactcc cccctggtca agactggaca tgcggtacat tattggtatg
     1681 aaacaataaa ttgtgatcga gatggtagaa ctgctgcgca ccaatgatcc tgttctaatc
     1741 tcctggttga cggccatttt ggcggaagcc aacatagaga ttatggtgtt tgacgctcat
     1801 accagtattt tggaaggcag cgccaatgca atccggcggc gagtcatggt catcgatgac
     1861 gactttgccc gcgccaagca agtttttgaa gccggcatcg aaaaattgga gggcggtgtc
     1921 agcgcctatg agtatcccga gtaattccta tcagctattg ggtggccagt tgatgatgtt
     1981 gtccgccgaa ggcggctatc gagcggcgat tgatccagtt ttactggctg cagccgttcc
     2041 ggctgctaaa ggtgatcaa
//
LOCUS       DASCNL010000967         1926 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001997134, whole genome shotgun sequence.
ACCESSION   DASCNL010000967 DASCNL010000000
VERSION     DASCNL010000967.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1926)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001997134"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..929
                     /locus_tag="QF359_12635"
     CDS             <1..929
                     /locus_tag="QF359_12635"
                     /inference="COORDINATES: protein motif:HMM:NF013594.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJO87800.1"
                     /translation="IQLGGQIGVKQYLSFNRTQESAADHAALRFLDRTGQSAQGLLEF
                     LEVLEDQELLSARNQDPYVRTHPLTRDRIDSLRHHLEQSRLADKPIPDSSRVNHARMK
                     AKLIGFTQGLTRTLQAYPENNDTLDGQYARAIAYYRQPNLKKAIGLIDSLISKFSNDP
                     YFHELKGQIYFENGKLELALPSYQKSVDLLPNSAILKAQLAHAQIEMSGVDTKNRSLL
                     MQAVENLLYSIDQDTERPSVWRQLGIAYGRLGKMGKSSHALAEEAILQGRLRDAIGIA
                     ERAKKLLKRGSPDWLRAEDIITVARENMKYKK"
     gene            942..1658
                     /locus_tag="QF359_12640"
     CDS             942..1658
                     /locus_tag="QF359_12640"
                     /inference="COORDINATES: protein motif:HMM:NF022694.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3047 domain-containing protein"
                     /protein_id="HJO87801.1"
                     /translation="MSAKFTTLIGTVFAVLILGCAIPTKSISPEGYLEIFGPTSTLKK
                     ANLPAEWFVDGMERSSFVADHLSIERIDGSPALNISTGSQNYIIAKRTRASLLAAPFL
                     SWSWNVPSFQGNEYPIRLIIGFHGGNPKSTSWGSQLLVYLGKITPPFDRAISIIWHRK
                     GLLRGTIDHTTKLPKYIARGGIDNTDKWQTENIDLAKLYKRLWPKDEYHKVLIMFAGF
                     AARQSATPTSAAFADFVLSK"
BASE COUNT          546 a          481 c          432 g          467 t
ORIGIN      
        1 taatacaatt gggcggccaa attggcgtaa aacaatatct cagcttcaac cgcactcaag
       61 agtcggccgc cgaccacgct gccttacggt ttttggatcg caccggacaa tcggcccaag
      121 gattactcga atttttggag gtgctggaag atcaggagct attaagcgcc cgcaatcaag
      181 acccctatgt gcgcacccat ccattaacca gagaccgtat tgattctctc cgtcatcacc
      241 tggaacaatc gcgtttagct gacaaaccaa ttccagattc ctcgcgtgtg aaccacgccc
      301 gtatgaaagc aaaattaatc ggttttaccc aaggcttgac gcggacgctt caggcctatc
      361 cagaaaacaa tgataccctg gatggacagt atgcccgggc catcgcctat taccggcaac
      421 ctaatcttaa aaaggcgatc ggcctcattg attctttaat ctccaaattt tctaatgatc
      481 catattttca tgaattgaag ggtcaaattt attttgaaaa cggtaagctt gaattggcgc
      541 tgccgtccta tcaaaaatcc gtcgatctgc tgccaaactc agcaatttta aaagcacaat
      601 tagcgcacgc ccaaatagaa atgtcaggcg ttgacaccaa aaaccggagc ctactcatgc
      661 aagcggtcga aaatttactt tattccatcg atcaagatac ggagcggcca tctgtatggc
      721 gccaactggg tattgcctat ggacggctcg gaaaaatggg taaaagctcc cacgcgttgg
      781 cggaagaagc aattttacaa ggccggctcc gcgacgcgat cggcattgct gagcgggcaa
      841 aaaaactgtt gaaacggggt tcgcctgatt ggttgcgggc ggaagacatc attacggttg
      901 cccgggaaaa tatgaagtat aaaaaatagt gcaggagtgg catgtcggct aaattcacaa
      961 cactaattgg aacagtcttt gcagtgctaa ttttaggctg cgccattccc accaagagca
     1021 tcagtcccga gggctatctc gaaatatttg gtcccacctc tactttgaag aaagccaact
     1081 tgccagccga atggtttgtc gacggtatgg aaagatcatc ctttgtggcg gaccatctta
     1141 gcattgagcg catagatggt tctccagcgc tgaatatttc aaccggttca caaaactata
     1201 ttattgccaa acgcacgcgg gccagcttgc tggcagcacc atttttgagt tggtcgtgga
     1261 acgtaccctc atttcaaggt aatgagtatc ccatccgcct cattatcggc tttcatggcg
     1321 gcaatcctaa aagcactagc tggggcagcc agctgctggt ttacctcggc aagataaccc
     1381 caccgtttga ccgcgctatt tcgatcattt ggcaccgcaa aggcctgctc cgcggcacca
     1441 ttgatcacac tactaaattg ccgaaatata ttgcccgagg tggcatagat aatacggata
     1501 agtggcaaac tgagaatatc gatctcgcca aactctataa acgcctgtgg ccaaaagacg
     1561 agtatcacaa agttctaatt atgtttgccg gctttgccgc ccgtcaaagc gctacgccga
     1621 ccagcgccgc cttcgccgat tttgtgctgt ctaaataact aacccaaatg gttaacattg
     1681 taataaagat accaggtacc tttattacaa ttgtgtgaat tatagtgttt gagcgtgcaa
     1741 taccctatat ctctcgtgta gagattaagg taagagaatt aaaacgcagg taaaaatata
     1801 tgaaaaaccg cattttaaaa ttcctgacaa ttaccggcat ttgcctaatt gccgcgtcgg
     1861 tgagcctgat ccccgaagcc aagggacaaa gttcgacgac gccgaaaata atcggccaga
     1921 gcacac
//
LOCUS       DASCNL010000968         1811 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001997854, whole genome shotgun sequence.
ACCESSION   DASCNL010000968 DASCNL010000000
VERSION     DASCNL010000968.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001997854"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..718)
                     /locus_tag="QF359_12645"
     CDS             complement(<1..718)
                     /locus_tag="QF359_12645"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO87802.1"
                     /translation="MKIVVLGAGVVGVTAAYYLQKDGHEVTVVDRQDGAGLETSFANG
                     GQISPSQAYPWAAPEVPFLMLKWLGRNDAPLLYRMRLDPRLWIWSLRFLANCTPGNFM
                     ANTVKNLRMSLYSRSLLPEIRLQTGIEYDFLEKGILQIYRNQKELDKAAKFNDALHKL
                     GCDHQVLDADGVRALEPAYDSSPDKIIGGIYTEADESGDAFKFSQELAKYTTGQGVEF
                     RYGEIIKSLNKAGAKIASVTT"
     gene            1077..>1811
                     /locus_tag="QF359_12650"
     CDS             1077..>1811
                     /locus_tag="QF359_12650"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HJO87803.1"
                     /translation="MTQITKSQLLTVEEMGRADALAVKAGVPSLELMENAGQSVFKTL
                     RQHWTRRRVVVLCGPGNNGGDGFVVARYLNAAGWPVTLGLLGEIKKLKGDAKANAKKW
                     EGEVHSLDVSLLNETELVVDALFGAGLARDIGGVTKDIINEINSRNLECLAIDMPSGV
                     DGDTGQVQGGAPQAQLTVTFFRKKLGHLLLPGRALCGEVQVTDIGIPETVLEKINPSN
                     AGNAPANWLDHLPEQSLSDHKYSRGHV"
BASE COUNT          464 a          425 c          474 g          448 t
ORIGIN      
        1 cggtcgtcac cgaggcgatc ttagcgccag ctttattcag agatttaatg atctcgccat
       61 agcggaactc aacaccctga cccgtcgtat atttagccag ctcttgcgaa aatttaaagg
      121 catcaccgct ctcatcagct tcggtataaa tgccgccgat tattttatcg ggactggaat
      181 cataggcagg ctcgagcgca cggacgccgt ctgcatccaa aacctggtga tcgcagccaa
      241 gcttgtgcag ggcatcattg aacttggcgg ctttatccag ttctttttga ttacggtaga
      301 tctgtagaat acctttttct aagaaatcat attcgatacc ggtttgcagt ctaatttccg
      361 gcagtaatga tcggctgtaa agcgacatac ggagattctt aaccgtgttg gccataaaat
      421 tgccgggcgt gcaattggcg agaaaacgca aactccagat ccacagcctg ggatcaagac
      481 gcatccggta gagcagcggc gcatcattac ggcctaacca tttcagcatc aaaaatggca
      541 cttccggcgc cgcccagggg taggcctggc tcggtgatat ctgcccgcca ttggcaaagc
      601 tggtttctaa accggcacca tcctggcggt caactacggt gacttcatgg ccatcttttt
      661 ggagataata ggcggccgta acaccaacaa cgccggctcc gagtacaact attttcacga
      721 ttggggcttc cttatattac tgcgagccga gttatatcgc caaaaccccc ctctagccag
      781 tccataggtt ataagaaagg taaaaaagcc ttcacttgcg aaacgagagt gaaaaggact
      841 aagttagagc tatgagttta atgttatcaa caacctacga aaccttttga gctgccagtg
      901 cgccggatga aaaagctcag gaagtagctg aagaaattgc cggatatgag aatcgattag
      961 tcacggtaga taatcgcttg atccgtttgg aagctatggt tgctatcgtt attgctggtg
     1021 ttgtcaacct aatggtaaag gctttttttg tctgacttta aattatatgc ggtcttatga
     1081 cccaaatcac aaaatcccaa ctcctgaccg ttgaagaaat gggtcgcgct gatgctttgg
     1141 cggtgaaagc gggcgtgccg agcctcgaac tcatggaaaa tgctggacaa agtgttttta
     1201 agacgctgcg ccagcactgg acgaggcggc gggtggttgt gttgtgtggg cccggcaata
     1261 atggcggtga cggttttgtc gttgcgcgtt atctaaatgc agcgggctgg ccggtgacgc
     1321 tcggtctgct gggcgaaatt aaaaagctca aaggggatgc caaagcaaat gctaagaagt
     1381 gggagggcga agttcattcg cttgatgttt cactcctcaa tgaaaccgaa ctggttgttg
     1441 acgcgctgtt cggagccggg ctggcccgcg atataggtgg ggttaccaaa gacatcatca
     1501 acgaaatcaa ttcccgcaat ttggagtgtc tcgccataga tatgccgagc ggagttgatg
     1561 gcgataccgg ccaagtgcag ggtggcgctc cacaagccca gttgacagtt acttttttcc
     1621 gaaaaaaact cgggcatttg ctgttgccgg gccgggcatt gtgcggtgag gtgcaggtca
     1681 ccgatattgg cattcccgaa actgttttag aaaaaattaa tccgagtaat gcaggaaacg
     1741 caccggcgaa ttggctcgat catctaccag agcaatctct tagtgatcac aaatattccc
     1801 ggggacatgt c
//
LOCUS       DASCNL010000969         1333 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000001999831, whole genome shotgun sequence.
ACCESSION   DASCNL010000969 DASCNL010000000
VERSION     DASCNL010000969.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001999831"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="QF359_12655"
     CDS             complement(<1..332)
                     /locus_tag="QF359_12655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HJO87804.1"
                     /translation="MTVLVIADHDNAALKGATFNTVTAAQELGDVTILVAGSDCGAVA
                     DEAAKLTGINKVLVADDAQYANPLAEVFAPLIIGMAGDYTHILASATTFGKNLLPRVA
                     ALMDVQQIS"
     gene            complement(345..1094)
                     /locus_tag="QF359_12660"
     CDS             complement(345..1094)
                     /locus_tag="QF359_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HJO87805.1"
                     /translation="MKVLVAIKRVIDYNVKIRVKSDESGVETTNVKMSMNPFDEIAVE
                     EGVRLREGGDAEELIAVSIGPKQTQETIRTALAMGADRGIHVETNDDVEPLAVAKLLK
                     AIIEKENPDLVILGKQAIDDDSNQTGQMLAALMGWSQGTFASELKISDGKANVTREID
                     GGLETIQINMPAVVTTDLRLNTPRYASLPNIMKAKKKPIDEFSPADLGVDISARLTTL
                     KVTEPSSRDAGVIVEDVAELVDKLKNEAKVI"
     gene            complement(1228..>1333)
                     /locus_tag="QF359_12665"
     CDS             complement(1228..>1333)
                     /locus_tag="QF359_12665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP:cob(I)alamin adenosyltransferase"
                     /protein_id="HJO87806.1"
                     /translation="LIYLNRLSDHLFILARHLNDNGAADVLWEPGKNH"
BASE COUNT          341 a          326 c          293 g          373 t
ORIGIN      
        1 gatatctgct ggacatccat taaggcagct acccttggca ataagttttt accgaacgtc
       61 gttgccgatg ccagaatatg cgtgtagtca ccggccatgc caatgattaa aggcgcaaat
      121 acttccgcca gcggattggc atattgcgca tcatcggcaa ccagcacttt attgatgcca
      181 gtaagtttgg cggcttcatc agcgactgca ccacaatcgc taccggccac taagattgtc
      241 acatcaccaa gctcttgagc tgcggtgaca gtgttaaatg ttgccccttt gagggccgca
      301 ttatcgtgat cagctataac cagaactgtc attttgcgtc tcctctatat gaccttggcc
      361 tcgtttttca gtttgtcgac caattcggca acatcttcga caataacacc ggcatcccga
      421 gatgatggtt cggttacttt taatgtcgtt agccgggctg aaatatcaac cccgaggtca
      481 gccggcgaaa actcatcgat cggctttttc ttagctttca taatgttcgg caaagaagca
      541 taacgcggcg tattgagacg taaatcagtg gttacaactg ccggcatatt aatctgaatg
      601 gtttcaagtc caccatcaat ctcacgcgtt acattggctt taccatcgct aatcttgagt
      661 tcagaggcga aagtaccttg agaccatccc attagagccg ccaacatctg acctgtttgg
      721 ttgctgtcat catcaatcgc ctgtttgccg aggatcacta aatctggatt ttctttttcg
      781 atgatggctt tcaggagctt ggcaacggcg agaggttcaa catcatcatt tgtctcaaca
      841 tgaatgccgc ggtcggcacc catcgccaag gcggtgcgga tggtctcctg ggtttgtttg
      901 gggccaatcg aaactgcgat tagctcttcg gcatcgccac cttctctgag gcggacgcct
      961 tcttcgacgg caatttcatc aaacgggttc atcgacattt tgacgttggt tgtctcaacg
     1021 ccagactcat cagatttaac ccgaattttt acgttataat caattacgcg tttaatcgcg
     1081 acaaggactt tcatacgatt tcctatgaaa ttggccacag aataaaataa atcagtattt
     1141 gaattccgat ttaacgcgaa acatatgaat tcaccaatgc tctgtcaata acacaggtta
     1201 aaataggtta aactaagtca ccggatgtca gtgattttta ccgggctccc atagcacgtc
     1261 ggcggcgcca ttgtcattta gatggcgtgc caggatgaat aaatgatcgg atagcctatt
     1321 taaatagatc aga
//
LOCUS       DASCNL010000970         1638 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002001187, whole genome shotgun sequence.
ACCESSION   DASCNL010000970 DASCNL010000000
VERSION     DASCNL010000970.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002001187"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1024
                     /locus_tag="QF359_12670"
     CDS             <1..1024
                     /locus_tag="QF359_12670"
                     /inference="COORDINATES: protein motif:HMM:NF014542.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CobW family GTP-binding protein"
                     /protein_id="HJO87807.1"
                     /translation="NVPTTLFTGFFGVGKTTAIRSLLARKPANENWAILVNEFGEIAV
                     DQAVLEDDSTNGQENRLTIREIPGGCMCCVANVPMRMAITEILRRAKPDRLLIEPTGL
                     GHPAGILDELRKDDLKDVVDVGAMICLVDPRYVGDARITGVDVFRDQVHLADVLIANK
                     SDLASEDDLAGFRDWAAALFPPKLVIVEAKMGEIDGTLLDLKANDERLPLFPHLHDHA
                     ETQPAPDIGTSQPGRPVRAVNAGNGYQGCGWVFAPEDIFEQDALVDYLGPPGPNDLNN
                     VERLKGVFRLGTEWILIDRTQGEISVTPIAYRRDSRLEIILPESEAVDWNGIETKLIS
                     LLSPRT"
     gene            complement(1376..>1638)
                     /locus_tag="QF359_12675"
     CDS             complement(1376..>1638)
                     /locus_tag="QF359_12675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87808.1"
                     /translation="WYASFMKLWWRHDKIPPLAVYTEDFDGVVASGLAIAGSAKTVHD
                     ILTDHIEDGGINYFVCRFAFGNITYQEAAYSIDAFNEMFLSN"
BASE COUNT          385 a          398 c          442 g          413 t
ORIGIN      
        1 aaacgtcccg acaactttat tcaccggttt tttcggtgtt ggcaaaacaa ccgccatccg
       61 gtctctgctc gcccgcaaac cagcaaatga aaactgggcg atattggtca atgagtttgg
      121 tgaaattgcg gttgatcagg cggtgcttga agatgacagc acgaacggcc aagaaaatag
      181 attgaccatt cgcgaaattc ccggcggctg tatgtgctgt gtggccaatg tgccgatgcg
      241 gatggcgatt accgaaattc tccgccgcgc caagccggac cgcctgctga tcgagccgac
      301 cgggcttggt catccggcgg gcattttgga tgagttgcgt aaagacgatc ttaaagacgt
      361 ggttgatgtt ggtgccatga tatgcctagt tgatcccaga tatgttggcg atgcgcgcat
      421 aaccggggtt gatgtcttca gggaccaggt ccatctcgcc gatgtactga ttgccaataa
      481 aagtgatctt gccagcgagg atgatctggc gggctttcgg gattgggcgg cggcgctatt
      541 tccaccaaag ctggtgatcg ttgaagcaaa aatgggcgag atcgatggca cgctgcttga
      601 tctcaaagcc aatgatgagc gcttgccgct gtttccacat ctgcatgatc acgctgaaac
      661 tcaaccggcc cctgacatcg gcacgtctca accgggccgg ccggtgcggg cagttaatgc
      721 gggtaatggc tatcaagggt gcggctgggt gtttgcgccc gaggatattt ttgagcaaga
      781 cgccttggtg gattatcttg gaccgcccgg tcctaatgat ctcaacaatg tcgagcgtct
      841 caaaggggtg tttcgccttg gcaccgaatg gattttaatc gaccgcaccc agggcgagat
      901 ttccgttacc cccatcgcct accgccgcga ctcgcggctc gaaatcatct tgccagagag
      961 tgaggcagtg gactggaacg gaattgagac gaagttgatt tcccttttgt caccccggac
     1021 ttgacctgcc attgccgaag ctacgcacag gcaggtccgg ggtccagttt accgcgtagt
     1081 ctgaactgga ttctggcatg aggccagtct gatatcggct tccagccaaa aacaattcgt
     1141 gagtgttctc tgtatcctcg gtcgttactt ttttttcgtg tgcttcgtga ccttcgtggt
     1201 gaattgaaat cttgaagatg gatacccggg tcgagtccgg gtatgacgag tttttttata
     1261 gctcttttat tcctctctcc gtcatgcggg tatttcggtg acagtttact ttttctgaat
     1321 tagaattgcg acctgagaat aatagaaaaa agtaaattgt caccgaaata agaaattagt
     1381 tagataaaaa catctcgtta aaggcgtcga tggaataggc ggcttcttgg taagttatat
     1441 taccgaaggc aaagcggcag acaaaataat ttataccacc atcttcaata tgatcggtga
     1501 ggatatcatg cacggtcttg gcactgccgg cgatcgccag cccgctcgcg acgacaccgt
     1561 caaaatcttc agtatagaca gccagcggcg gaattttatc atgccgccac cagagcttca
     1621 taaagctcgc ataccaga
//
LOCUS       DASCNL010000971         1213 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002001391, whole genome shotgun sequence.
ACCESSION   DASCNL010000971 DASCNL010000000
VERSION     DASCNL010000971.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1213)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1213)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002001391"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="QF359_12680"
     CDS             <1..858
                     /locus_tag="QF359_12680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HJO87809.1"
                     /translation="PISPNEVAESAIAAAEAGASILHLHARNEDGSPTPSADTFLEFL
                     PRIKQSTDAVVNITTGGGHGMTLEERCEGALRASPEMTSLNMGSMNFGLFPILDKPFE
                     WKHKWEPEYLEMTRDFIFRNTFKDIEWVLKELGEGHGVRFEFECYDMGHLYNLAHFVN
                     RGLVKPPFFVQTIFGILGGIGADIENLLHMRRMANKLFGEENYEWSILAAGRHQMGFV
                     TTGAILGGNVRVGLEDSLYIGKGELAKSNAEQVSKIKHIVEDLSLEVATPTEARERLA
                     LKGGDQVAF"
BASE COUNT          326 a          284 c          293 g          310 t
ORIGIN      
        1 ccgatctcac ctaatgaggt tgccgaaagc gccatcgcgg cagccgaagc cggcgcttcc
       61 attctccatc tacatgcgcg caacgaagac ggtagcccaa cgccgtcggc tgatactttc
      121 ttggaatttc taccgcgcat caaacaatcg actgatgcgg tggtaaatat aacgaccggc
      181 gggggtcacg gtatgacatt ggaggaacgc tgcgagggag cgttgcgggc gagcccagaa
      241 atgacctcac tcaatatggg ctcaatgaat tttggcctct ttccgatcct cgataaaccg
      301 tttgagtgga aacacaaatg ggagccggaa tatctcgaga tgacccggga ttttattttc
      361 cgtaatacct tcaaggatat cgaatgggtc ttgaaagagc tcggcgaagg ccacggcgtg
      421 cgcttcgagt ttgagtgcta cgacatgggt catctgtata atctcgccca ctttgtcaac
      481 cgcggcttgg tcaaaccgcc attcttcgtt cagaccatat tcggtattct cggcggtatt
      541 ggcgctgata tcgaaaacct cctgcacatg cgccggatgg ccaataaact ctttggtgag
      601 gaaaactacg aatggtcgat attggctgcc ggacgccacc agatgggctt tgtcacaacg
      661 ggcgctattt taggcggtaa cgtacgcgtt ggcctggagg actcgcttta tatcggtaag
      721 ggagagttgg cgaaatcaaa cgctgaacag gtgtctaaaa tcaagcatat tgttgaagat
      781 ctgtcgcttg aagtggcaac cccgaccgaa gcccgcgaac gcttggccct caaaggtggc
      841 gatcaagtcg ccttttaaaa ggttaatttt ttataagaaa taaccaccaa cttccctaat
      901 ctataatcga acctttcttc cctattcaaa actggtaaga ttttgtttct gttaaaactc
      961 tttatggcaa aatggaaaac aaattgaatc aaaaagctta ggccattgtc tttgttataa
     1021 aaatagttga aggccggacg tgagatatta aaaaaaggaa agccgtagcc cgtttatgtc
     1081 cacttttagc cataagatgc tatgaggctg aaggatgcta catgctgcat gatgctcctt
     1141 cttagtttca ctgttaatct gaaggagcgg tacgatgaca tcaatttcca cagccatttc
     1201 caacaaacaa ttt
//
LOCUS       DASCNL010000972         1196 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002003232, whole genome shotgun sequence.
ACCESSION   DASCNL010000972 DASCNL010000000
VERSION     DASCNL010000972.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1196)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1196)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002003232"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            57..>1196
                     /locus_tag="QF359_12685"
     CDS             57..>1196
                     /locus_tag="QF359_12685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050080 - malonyl-CoA decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA decarboxylase family protein"
                     /protein_id="HJO87810.1"
                     /translation="MTEHKKSGFWDRALRNMRGAWDKIASDTGETPEVSVTPGLSDDD
                     RLHLIEHMQACLDARGGEVSARKRAAALGHAYLSLNEDGRKKFLNILAGEFDTDGEAT
                     NEAVSNLLQTKDGETRFKAEQKLRKALKAPRVHLLTQFNALPEGVKFLVDMREELIPW
                     AKQNASLKGLESDLKSLLTGWFDVGFLELQQITWQAPASLLEKLFAYEAVHEIKDWDD
                     LKNRLASDRRCFAFFHPRMPEEPLIFVWVALVNGIADNVQVLLDQDAPLGDPEAANSA
                     IFYSISNAQAGLSGINFGNFLIKRVVDSLSKELPNLKNFATLSPLPGFRRWLDERLLE
                     SNFDLLTTEQDEEIMNAASKGSPEAALAELLARDKWYEDEQVSKVL"
BASE COUNT          304 a          272 c          322 g          298 t
ORIGIN      
        1 ccggcaaaat atgctaaatg aaggcataac aagaacttac atgaaaaaat gatactatga
       61 cggaacataa aaagtcggga ttttgggatc gtgcgcttcg caatatgcgt ggtgcctggg
      121 ataagatcgc ctctgatacc ggcgagaccc ctgaagtttc ggtaacaccc ggtctgagtg
      181 atgatgatcg tcttcatttg atcgagcata tgcaagcttg tttggatgcc aggggcggcg
      241 aggtgtcggc ccgtaagcgc gccgccgcac ttgggcacgc ctatctgtcg ctcaacgaag
      301 atggtcgaaa aaagttcctc aatatcctcg ctggtgagtt tgacaccgat ggtgaagcga
      361 ccaacgaagc ggtgagcaat ctcttgcaaa ctaaggacgg tgaaacgcgc ttcaaggctg
      421 aacaaaaatt acgcaaagcg ctaaaggcac cgcgcgtgca tttgctgacc cagtttaatg
      481 ccctgccgga aggggtgaag ttcctggtcg atatgcggga ggaactcatc ccgtgggcaa
      541 agcagaacgc ctcccttaaa ggtttggaaa gtgatctcaa atccctttta accggctggt
      601 tcgatgttgg gttcctggaa ctgcaacaga ttacctggca ggcaccggcg tcattgctgg
      661 aaaaactatt tgcttatgaa gcagtacacg agattaaaga ttgggacgat ctcaaaaaca
      721 gattagcgtc ggatcgccgt tgttttgctt tctttcaccc gcgcatgccg gaagaaccgc
      781 tgatttttgt ttgggtcgcc ttggtcaatg gcattgccga taatgttcaa gttctgctcg
      841 atcaagatgc ccccttgggt gatccggaag cagccaattc ggcgattttt tactcgatct
      901 ccaacgcgca agctgggttg tcaggcatta attttggcaa ttttttaatt aaacgggttg
      961 tcgacagtct gtcaaaagaa ctgcctaact tgaagaattt tgccacgctt tcaccgttgc
     1021 cggggttccg gcgctggctt gatgagcgtc tgcttgaaag caattttgac ttactgacaa
     1081 ctgaacagga tgaggagatt atgaacgctg cgtccaaggg ttctcctgag gccgctttag
     1141 cggaattgtt ggcccgcgat aaatggtacg aagacgagca agtatcaaaa gtgctg
//
LOCUS       DASCNL010000973         2960 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002003287, whole genome shotgun sequence.
ACCESSION   DASCNL010000973 DASCNL010000000
VERSION     DASCNL010000973.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002003287"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..755)
                     /locus_tag="QF359_12690"
     CDS             complement(<1..755)
                     /locus_tag="QF359_12690"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO87811.1"
                     /translation="MTTVPIEATPVDRERSSITWGGFSLAFWLPVTWMVTLLFTVALA
                     DILPIREPTESDFTALKARPGLEFWLGTDVLGRDIFARIIHGARISLTVGFFAPVFGM
                     IIGLIFGMMAGYYRGKLESIIVGVIDIILAFPNIVLAMCILFFAGATMVNLIIVLSVT
                     SIPANTRIARASTLVFAGREFVMAARAQGASDLRILWHEILPNIVLPQLAYILSFMSI
                     VIMIEGSLAFLGVGIPPPTPTLGGMIAQGFPDI"
     gene            complement(752..1708)
                     /locus_tag="QF359_12695"
     CDS             complement(752..1708)
                     /locus_tag="QF359_12695"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO87812.1"
                     /translation="MLFYIRRKLIHLIPITFAVTALSFFFIDLLPGDVADAIAGVGTD
                     STVIDEAAIQAIRKDLGLDQPVIVRYFSWLGNALVGELGKSYQTGQTVADAIALRLPI
                     TLQLLVMAQLLAVVFAVPAGILAAYRAGKVTDQVVTTLTFAFLAAPSFIIAIVLVFIF
                     AVILNWFPATGYVPFGDDILANLRAFTLPAMALALIEWPILSRVLRNDLIATLQEDFI
                     LLAKAKGLGTIYILLRHALRPSSFTLITIVGIQLGNLISGAVIVESIFALPGIGSLLV
                     DSIHGREILMVQGVIVLMAMAYVTINLAVDIIYGTLDPRIRQ"
     gene            complement(1750..>2960)
                     /locus_tag="QF359_12700"
     CDS             complement(1750..>2960)
                     /locus_tag="QF359_12700"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87813.1"
                     /translation="FTADAYVVHFKRYQASRAWGFLRGMVGPIKEVVAIDSYTVEFRM
                     LRPFPAFGAILSNPVYPMWANAPKHSQKVGKELNRQPVGTGPYMLANWTPGVSITYVK
                     NPHYWNPKKQHLDKIVFKVIKGELPRLNSVKSGAIDVMLTRDGKTANQAKQAPNLQVI
                     TELVGGTTTIEFNTSRPPLNDVRVRKALAHAVNRRADLKASNDGFGLPSTDWFGPGSK
                     WHCGGKTGYPEFNPRKAKGLLMAYGKPVKFKMVTMPIKNFIVGAKLHQTFWKRMGVEV
                     ELKVVPPGPAYFRAVRSGKFDAWLVGISEAVDPGLQGQAFYSKNRGNSTKSNFADVDA
                     ALENAWRSFKDEVTRKAAYCNYVSTVVKQQPILFRSHNNFALIAGKKVKGLTKPNLTI
                     SRLHEAWLER"
BASE COUNT          791 a          766 c          764 g          639 t
ORIGIN      
        1 ttaatatcag ggaagccttg cgcgatcatg ccgcccaatg tcggcgttgg cggcggaatg
       61 ccaacaccca aaaaggctag cgatccttcg atcatgatga caatcgacat gaacgacaga
      121 atgtaagcca attgcggcag cacaatatta ggtagaatct catgccataa aatacgtaaa
      181 tccgaagccc cttgggcacg cgcggccata acgaattcac gcccggcaaa aaccaaggtt
      241 gaggcccggg caattcgcgt attggccggg atcgaagtta cagagagcac gatgatcaaa
      301 ttaaccatcg tggcaccagc aaagaacaga atacacattg ctaaaactat attgggaaaa
      361 gccaggataa tatcaattac gccaacgatg atcgattcca gtttgccgcg gtagtagccg
      421 gccatcatgc cgaaaatgag gccgatgatc atgccaaata ccggggcaaa gaatcccacc
      481 gtcagcgaaa ttctggcgcc atggatgatg cgcgcgaata tatcgcggcc caaaacgtca
      541 gtgcctaacc aaaactccag acccggccgc gctttgaggg cggtaaaatc actttcggtc
      601 ggctcgcgta tcggcagaat gtcggcgagc gcaactgtaa acagcaaggt aaccatccaa
      661 gttaccggca accaaaaggc cagactgaaa ccaccccaag taatcgatga gcgttcccgg
      721 tcaaccggcg tcgcctcaat gggtaccgtc gtcattgtct aatcctcgga tcgagggtgc
      781 cgtagataat atccaccgcc aagttgatcg tcacataggc catcgccatc aggacgatga
      841 cgccttgtac catcagtatt tcacggccgt gaattgaatc gaccagtaat gacccaatac
      901 caggtaacgc gaaaatactt tcgacgatga ccgcaccact gatcagattg ccaagctgaa
      961 taccgacgat ggtgataagc gtaaacgacg acggccggag agcatggcgc aacagaatgt
     1021 agatggtgcc gagtcctttc gctttggcaa gcaaaataaa atcctcttgc agcgttgcaa
     1081 tgagatcgtt gcgcaagacc cggctgagga tcggccactc aatcagggcc aacgccatcg
     1141 ctggtaaagt gaaggcccgg aggttagcaa gaatatcatc gccaaagggt acatagccgg
     1201 tggccggaaa ccagtttagg atcacggcga atatgaaaac cagcacaatt gcgatgataa
     1261 agctgggtgc ggctaaaaaa gcgaaggtca gtgtcgttac cacctgatcc gtcactttac
     1321 cggcacggta ggcggcgagg atgccagctg gaacggcaaa caccacagcc aatagctgcg
     1381 ccatcaccag cagctgtaag gttatcggca gcctgagcgc aatggcgtca gccacggtct
     1441 gaccagtttg gtaagatttc ccaagctcac cgacgagagc attgccaagc caggaaaagt
     1501 agcggacgat taccggttga tcgaggccaa ggtcttttct gatcgcttga atggccgcct
     1561 catctataac cgtgctatcg gtcccgaccc cggcgatggc atcggcgaca tcaccgggca
     1621 gtaagtcaat gaagaagaag ctcaacgccg tcacggcaaa agtaatcgga attagatgga
     1681 tcagcttgcg gcgaatgtaa aaaagcatct aattctcacg ttgagctaac ttcttcagct
     1741 gactttagtt taacgttcca gccaagcctc atggagacgg ctgatcgtta aatttggttt
     1801 tgttagtcct ttcacttttt tacccgcaat caaagcaaaa ttattgtggc tgcggaataa
     1861 aatcggctgc tgtttgacga cggtactcac atagttgcaa taggccgctt tacgggtcac
     1921 ttcatcttta aagctgcgcc aagcgttttc caaagctgca tcgacatcgg caaaatttga
     1981 cttagtgctg ttgccgcggt ttttggaata aaaggcttgc ccctgaaggc ccgggtcaac
     2041 agcttcagat atacccacca gccaggcatc aaacttacca gagcgtactg cccggaaata
     2101 agccggtccc ggcggcacga ctttaagctc gacctcgaca cccatgcgct tccaaaaagt
     2161 ttggtgaagc ttggcaccaa cgatgaaatt cttgatcggc atagtgacca ttttgaactt
     2221 caccggcttg ccataagcca tcagtaaccc tttggctttg cgcggattaa actccggata
     2281 gccggttttg ccgccgcaat gccatttaga gccggggcca aaccaatctg tcgacggcag
     2341 gccaaaacca tcattggagg cttttagatc ggcgcgccgg ttgacggcgt gagccagggc
     2401 tttgcgtacc cgcacatcat taagcggcgg ccgactggta ttaaactcga tggtggtggt
     2461 gccgccgacc aactcggtaa tcacttgaag gtttggagct tgcttcgcct gatttgcggt
     2521 tttgccgtca cgggttagca tgacatcgat agcgccgctt tttaccgagt tcaaacgcgg
     2581 tagctcgcct ttgatgactt taaagacaat cttatcgagg tgttgttttt taggattcca
     2641 gtagtgaggg tttttaacat aagtgattga gactccaggt gtccaattag ccagcatata
     2701 ggggccggta ccgacgggct ggcggttaag ctccttaccg actttttgcg aatgctttgg
     2761 cgcattggcc cacattgggt aaaccgggtt ggaaagaatg gcaccaaagg ccggaaatgg
     2821 gcgcagcatg cggaactcaa ctgtgtacga atcaatcgcc acgacttctt tgattggtcc
     2881 gaccatgcca cgcaggaacc cccaggcccg gctggcttga taacgcttga aatgcacaac
     2941 ataggcgtca gcggtaaatg
//
LOCUS       DASCNL010000974         1147 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002004647, whole genome shotgun sequence.
ACCESSION   DASCNL010000974 DASCNL010000000
VERSION     DASCNL010000974.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1147)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1147)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002004647"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..139
                     /gene="pyrB"
                     /locus_tag="QF359_12705"
     CDS             <1..139
                     /gene="pyrB"
                     /locus_tag="QF359_12705"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729063.1"
                     /note="catalyzes the transfer of the carbamoyl moiety from
                     carbamoyl phosphate to L- aspartate in pyrimidine
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HJO87814.1"
                     /translation="IDSEVADDYSRSVIREQVEMGVAVRMACLDILSSNLQLEMQEGA
                     E"
     gene            136..>1147
                     /locus_tag="QF359_12710"
     CDS             136..>1147
                     /locus_tag="QF359_12710"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593535.1"
                     /note="Catalyzes the reversible hydrolysis of the amide
                     bond within dihydroorotate. This metabolic intermediate is
                     required for the biosynthesis of pyrimidine nucleotides;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HJO87815.1"
                     /translation="MTGIWTASLPDEKLGQKAYVNVRLLDPATDLDVVCDAKGGLLTN
                     GEKIVEFGAGIFKDGTPDGVEIIDCSGHCLSPGLVDIRVQIREPGYEHKSTIESAGRS
                     ATAGGVTTMVCLPNTNPVIADMSQVEFVARRARKIGLAKIYPYAALTEDLAGEKLTEI
                     GILAEAGAVAFTDGDKTIANAQVLRRALSYARTFDLLIVQHPEEPSLVSPGGMNSGET
                     ATRLGLPGIPREAEIIMVERDLRLVEMTGGKLHFGHISTGEAVKVIRQAKARGLNVTC
                     DTAPPYFALNDQSVGDYRTFAKLSPPLRSEDDRLAIIEGLKDGTIDAIASDHAPQDAD
                     SKR"
BASE COUNT          272 a          312 c          311 g          252 t
ORIGIN      
        1 gattgattcc gaagtggctg atgattacag ccgcagtgtg atccgcgaac aagttgaaat
       61 gggtgtcgcc gtgcgcatgg cctgcctcga tatcctctcc agcaatctcc agctggaaat
      121 gcaggagggc gctgaatgac tggcatttgg acagcctccc tgcctgatga aaagcttggc
      181 cagaaagcgt atgtaaatgt ccgcctgctt gatccggcga cggatcttga tgtggtgtgc
      241 gatgctaaag gtggattgtt gacaaacggt gagaaaattg tcgaatttgg agctggtata
      301 tttaaagatg gcactccgga cggcgttgag atcatcgatt gcagcggtca ttgcctgagc
      361 cccggcctcg ttgacatccg ggtccagatc agagagcccg gctacgagca caaaagcacc
      421 atcgaaagcg ccggaagatc ggcgactgcc ggcggcgtga cgacaatggt ttgcctgccc
      481 aacaccaatc cggtgatcgc cgacatgtcg caggtcgaat tcgttgcccg gcgtgcgcgc
      541 aaaatcggcc tcgctaaaat atatccttac gcagccctta ccgaagattt ggccggtgaa
      601 aaactaaccg agattggcat tcttgctgaa gctggtgccg tcgctttcac cgatggtgat
      661 aagacaatcg ccaatgcgca agtactcaga cgcgccctta gttatgcccg tacttttgac
      721 ctgctgattg tccagcatcc tgaggagccg agcctagttt caccgggtgg aatgaattct
      781 ggggaaaccg cgacccggct cggtttgccg ggcattcccc gggaagctga aataatcatg
      841 gtcgagcgcg atttacgtct agtggaaatg accggtggca aacttcactt tggccatatc
      901 tcaaccggcg aagccgtcaa agtcatccgc caagccaaag cccgaggcct caatgtcacc
      961 tgcgacaccg ctcctcctta ctttgcactc aatgatcaat ctgtcggcga ctatcgaacc
     1021 tttgcaaaat tatcgccgcc gctccgttcc gaagatgacc ggctggccat tattgaaggc
     1081 ttaaaagatg gcaccattga tgccatagcc agtgatcacg cgccgcaaga tgccgacagc
     1141 aaacgct
//
LOCUS       DASCNL010000975         1244 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002006516, whole genome shotgun sequence.
ACCESSION   DASCNL010000975 DASCNL010000000
VERSION     DASCNL010000975.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1244)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1244)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002006516"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="QF359_12715"
     CDS             complement(<1..250)
                     /locus_tag="QF359_12715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO87816.1"
                     /translation="MNSTPENNNFSVSVKADRIAFGDTVLFEQIEFDLPAGEWTCLLG
                     PSGVGKTTLLRLIASLVPDVENVVIKCSDGRSLKARAAY"
     regulatory      complement(243..351)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            477..896
                     /locus_tag="QF359_12720"
     CDS             477..896
                     /locus_tag="QF359_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HJO87817.1"
                     /translation="MAPLFTVNSQGLIAFDRSAILIKTAKGRFKFNIEMAISRRQQSQ
                     GLMFRRSLAADAGMLFDYRIPQRISMWMKNTFIPLDMIFIDQDGKVINNAERAIPHSE
                     VVISSKTPARAVLEVNGGTASRLGIRSGDQVLHAIFK"
BASE COUNT          313 a          306 c          300 g          325 t
ORIGIN      
        1 tataggcagc tctagcttta agtgagcgac cgtcagagca cttaattacg acattctcaa
       61 catcgggcac cagactggcg atcaggcgca acagcgtcgt tttgccaaca ccgcttggcc
      121 cgagcagaca cgtccattca ccggcgggta gatcaaattc aatctgctca aacaatacag
      181 tgtcgccaaa ggcgatgcgg tcggctttta cggagactga aaaattattg ttttctggcg
      241 tcgaattcat aactcactcg tccctacgcc ggttctaacc gggtcaggtt cctggggtcg
      301 tctccctatt gagacctctc agccaggtaa gcggctcccc ccagtggttg gtagtgtgac
      361 tatacttaat tagggcagtg gttcaatagt gttgtcaccg gagtgagaat tcttacacta
      421 aagagatgag acaaaattcc cgtcgttcct ttttagcctt gcttagcgcg ctgttagtgg
      481 cgccgctgtt tacggttaat tcccaggggt tgatagcctt cgatagatcg gcgatattga
      541 tcaaaacagc gaaggggcgc tttaaattca atattgaaat ggctatcagc cgccgccagc
      601 aatcccaagg gctgatgttc cgccgctcgc tggccgccga tgccggcatg ctgtttgatt
      661 accgtatccc gcagcgcatc agtatgtgga tgaaaaatac gtttatcccg ttggacatga
      721 tctttattga ccaggacggc aaagtgatca ataatgccga gcgcgcaatc ccccactcag
      781 aggtggttat ctcatccaaa acacccgccc gcgccgtgct tgaagtcaat ggcggcactg
      841 cttcgcgctt gggtatcagg tccggcgatc aagtcctgca tgcgattttc aaatagttaa
      901 ttttttaaaa ggtgcctatc actttttgaa aaattaacct tttaacgttt caccgccaag
      961 agttctgccg caaataagcg agcaactcga ggctgggcga gtgcatgctg gagtcacaaa
     1021 attagccttt gaattatttt gcttttatgc atgatctagc tgtttatgat atctgacaca
     1081 aaaatcaata tataataaat gacggcagat cgggggagac taacgtgagc ccaaaaaatt
     1141 ccaatgaaac aatctggggc agtgatgtta ttgcgtcggc tttgcgagaa actagcattc
     1201 cctatgcttg tctgaaccca ggcgcaagct accgtggcct tcat
//
LOCUS       DASCNL010000976         1038 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002009974, whole genome shotgun sequence.
ACCESSION   DASCNL010000976 DASCNL010000000
VERSION     DASCNL010000976.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002009974"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="QF359_12725"
     CDS             complement(<1..268)
                     /locus_tag="QF359_12725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87818.1"
                     /translation="MNKSAKIQTADDILESQTGGMDYKVPKLDGDYRKGLGSLSRIAR
                     MAMQYRVQFPVAIIAVIIAAFFQLYIPRFLGEAVDHATGLLGGAK"
     gene            556..825
                     /locus_tag="QF359_12730"
     CDS             556..825
                     /locus_tag="QF359_12730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87819.1"
                     /translation="MLYVDDDSEHQAYEKVISQLVEEHGNSSISLTIGPSVGVLRAAN
                     KLAELTTVDIFMTANDNQVYINEGWDVQLDAEIKKYPDGVFCMYV"
BASE COUNT          295 a          247 c          238 g          258 t
ORIGIN      
        1 ccttggcacc gccaagcaat ccggtcgcat gatcaaccgc ctcgccaaga aaacgcggga
       61 tatataattg aaaaaaagcg gcaatgatga cggcgataat agcgaccgga aattgcacgc
      121 gatattgcat cgccatgcgc gcaattcgtg acagtgagcc aaggcctttg cggtaatcgc
      181 catcaagctt cggcacttta taatccatgc caccggtttg gctttctaat atatcgtcgg
      241 cggtttggat ttttgcggat ttattcaccc ggcatgaccc catctgatcg tttttgttgt
      301 tcttaatttc ggcgatgaat ctaaactacc aattaaagag ttacaactcc ctcactaggg
      361 caaaagctga tcacgcagca tacttgattt tcctcgatct ttgcgggcac tattgtaacc
      421 aatctcaccc aaactgagag aaccgcaatc caatgatata ctcttatttg cccgacgtga
      481 ggccggtcag atcgcattct ggaatttatc tcaagcgcgc ttaacaccgc cgcccagccg
      541 gatcggattg agatattgct atatgtcgac gatgattctg agcatcaagc ctacgaaaaa
      601 gtgatctccc aactggtcga ggaacatggc aacagctcca tatcacttac tattggcccg
      661 tccgtcggtg tgctgcgagc cgctaataag ctggctgaac ttaccaccgt ggatatcttc
      721 atgacggcaa atgacaacca ggtatatatc aacgaaggat gggacgtgca gcttgacgct
      781 gaaattaaaa aatatccaga tggcgttttc tgcatgtatg tctaacatca acgcccttgg
      841 gacatattaa agggttttca taaaggaaga tttctggttc atcgtaatga ccgaggggaa
      901 tgaagatgag gcagaaatcg atgagttcaa aagacccagc tgagaagtta gtacgtgata
      961 tccgtcgcaa gacacgtcag aagcattcga caggcaggcc gagaaaactg gaataaagat
     1021 attccttgga ttatcact
//
LOCUS       DASCNL010000977         2449 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002013015, whole genome shotgun sequence.
ACCESSION   DASCNL010000977 DASCNL010000000
VERSION     DASCNL010000977.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002013015"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="QF359_12735"
     CDS             <1..423
                     /locus_tag="QF359_12735"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO87820.1"
                     /translation="RETGAVKLLRYTIIQDAGKAVFPEYVKAQFHGAAVQGIGLALNE
                     EYIYDENGVMANPGFLDYRMPVASDIPVIDTQIVEVPNPNHPYGIRGVGEVPIIPPLA
                     AISNAIYDAVGIRMRDHPMSPPKVLAALDEAAPATAAE"
     gene            complement(485..1510)
                     /locus_tag="QF359_12740"
     CDS             complement(485..1510)
                     /locus_tag="QF359_12740"
                     /inference="COORDINATES: protein motif:HMM:NF014899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87821.1"
                     /translation="MAEIVFGVGSSHTPMLGTQPEDWDQRAEADRNNPAHPFRGGVYT
                     YEELTELRKGENLATQHTAEVRQERHDASQKVLDQLGDKIRAADLDVLVIFGDDQREC
                     FLLEQSPAFSVYNGEKVLNKVLSQERLDTMSPGIAIAAWTNVPEDHDLEYAGEPELAD
                     HVVSSLMLDEFDVSVSSKMPDGPWGENGIGHAFGFFYHRILNDFEACQNMATLPIFIN
                     TFFPPNQPTAKRVLNFGKAVGKAIRAWDSDKRVGIAASGGFSHFVIDEELDQRILKAI
                     ANGDEAAIINEPEYSYQSGSSEIKNWIAAMGATQGSGLKFDLLDYVPCYRSDAGTGNA
                     NTFGVWS"
     gene            complement(1603..2343)
                     /locus_tag="QF359_12745"
     CDS             complement(1603..2343)
                     /locus_tag="QF359_12745"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HJO87822.1"
                     /translation="MDGNLRPEPKGGVIALERGLSLLSAFGTDRSALRLTDLAEITGL
                     NKSTILRLCVSLERQGFIKRRDDGWFQLGAALFQLGSAYQRSFQIVDVIDPVMQTLVN
                     EFNECATFTVRDGNSIVCLHKVDSSQGIRDAGSSVGDRYDLNNGASSQVLRAFSGEEG
                     KNFDQIRKDIYATSFGTLYPDAAALACPLFGMGGDLLGALQLSGPQYRFSEDAMAAMK
                     QGLLPAVAGLTRSLGGNADIYRPNADNN"
BASE COUNT          609 a          608 c          606 g          626 t
ORIGIN      
        1 cgggaaaccg gtgcggtcaa attgctgcgc tataccatta tccaggatgc cggcaaggcg
       61 gtgttccccg aatacgtcaa agctcaattc cacggcgccg ccgttcaagg tatcggtttg
      121 gcgttaaacg aggaatatat ctatgacgaa aacggtgtga tggccaatcc gggtttcttg
      181 gattaccgga tgccggtcgc ttcagacatt ccggttattg atacgcaaat tgttgaggta
      241 cccaatccta accatcctta cggtattaga ggtgtcggcg aagtgccgat catcccgcct
      301 ttggcggcga tctcaaacgc aatttatgat gctgttggta ttcgtatgcg ggaccacccg
      361 atgtcgccac caaaagtttt ggccgccctt gatgaagctg caccggctac ggcagcagaa
      421 tagagttttg gtgtttcggt gacagtttac ttttatacaa taagtaaact gtcaccgaaa
      481 tagattaaga ccagacgccg aaggtgttgg cgttgccggt gccggcatca gaccggtagc
      541 acggtacata atccaataaa tcaaacttga gccctgatcc ttgggttgca cccatcgccg
      601 caatccaatt tttaatctcg gagctgcccg attggtacga atattccggt tcattgatga
      661 ttgctgcctc atcgccattg gcgatggctt tgagaattcg ttgatcaagt tcttcatcaa
      721 tgacgaaatg actgaaacca cccgacgccg caataccaac gcgtttatcg ctatcccaag
      781 cacggatcgc tttgccgacg gctttaccga aattcaggac acgcttggca gttggttgat
      841 tgggcgggaa gaatgtgttg atgaatattg gtagggtcgc catattctga caggcctcga
      901 agtcattcaa tatgcgatga tagaaaaagc cgaaagcgtg gccgatccca ttctcacccc
      961 atgggccgtc tggcattttg cttgaaacag agacatcaaa ctcatcaagc atcagtgacg
     1021 agacaacgtg gtcagccaat tccggctctc cggcatattc gagatcatga tcttccggca
     1081 cattagtcca ggcagcaatg gcgatgccgg gtgacatggt atcaaggcgt tcctggctca
     1141 agactttatt gagaactttc tcgccgttat agacagagaa cgccggtgac tgctcaagca
     1201 gaaaacattc tcgttgatcg tcaccgaaaa ttaccaaaac atccaaatca gcggcgcgaa
     1261 ttttatcgcc aagctgatca agcactttct gactggcgtc gtgacgttcc tggcggactt
     1321 cagcagtgtg ctgcgtcgca agattttcgc ctttgcgcag ttcggtcagt tcttcataag
     1381 tgtaaacgcc gccccggaaa ggatgagccg gattattgcg gtccgcttcg gcgcgctgat
     1441 cccaatcttc aggttgagtg cccagcatcg gggtgtggga agagcctact ccaaatacta
     1501 tttcagccat gattacctcc ttgcgattag cttcattaaa tcaatttagt ttttgttttc
     1561 taattagttg catgttttgt catcaatgtt ccttgatacc gatcaattat tatctgcgtt
     1621 aggccggtaa atatctgcgt tgccgcctaa ggatctggtt agtcctgcta ccgcaggcag
     1681 gaggccctgt ttcattgctg ccatggcatc ctcggaaaag cggtattgcg gacctgagag
     1741 ctgaagggca cccaataggt caccacccat gccaaaaagc gggcaggcga gggcggcggc
     1801 gtccggatat aaggtaccga aagaagttgc gtaaatatcc ttgcgaattt ggtcgaagtt
     1861 tttaccttct tcgcctgaaa atgcccgcag cacttgcgat gacgcgccat tgttgagatc
     1921 gtagcggtcg ccgacgcttg atccggcatc gcgaatccct tgggaagagt cgaccttatg
     1981 caagcaaacg atgctgttgc catcgcgcac ggtaaaggtc gcacattcat taaattcatt
     2041 gaccagggtc tgcatgacgg gatctatcac atcaacaatc tgaaaactcc gttgataggc
     2101 ggagccaagt tggaacaggg cagcacccaa ctggaaccag ccatcatccc ggcgtttgat
     2161 aaatccctga cgctccaagg agacgcaaag ccggagaata gtgcttttat ttaagccggt
     2221 aatctcagcg agatcggtga ggcgaagcgc gcttctatcg gtgccgaatg ccgacaatag
     2281 tgagagcccg cgttccaaag caataacgcc gccttttggt tccggtctta aatttccatc
     2341 cacgaattat ttccttttca gcacaaatta tgttgctttg tgaattcacc tgttgttata
     2401 ctacacgaaa ttgagtttca tgcaatgaaa cattttataa atcacagaa
//
LOCUS       DASCNL010000978         1114 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002014588, whole genome shotgun sequence.
ACCESSION   DASCNL010000978 DASCNL010000000
VERSION     DASCNL010000978.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002014588"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..875)
                     /locus_tag="QF359_12750"
     CDS             complement(<1..875)
                     /locus_tag="QF359_12750"
                     /inference="COORDINATES: protein motif:HMM:NF014587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87823.1"
                     /translation="MSNNNDKKESFRDGNSKAPKRKRGKYGFIRKRKPRMYSALDLGT
                     NNCRLLIAHPIGQGFRVATSFSSIVRLGEGLTESGRLADDAMDRTISALSICADKLKL
                     FDVAQSRNIATEACRRAANCDDFLARVAQETHLNFETISSDEEARLALKGCQSLLNAT
                     IPFALVFDIGGGSTEIVWAKQKPEKEESEFANFKILDVLSLPLGVVTLAEECGIYEIN
                     YDCYQKMVRDIAEQLPAFCERNNIKQEVTANNVQMLGTSGTVTTLGAVHLELDQYNRL
                     LIDGLDLTFNDLNNAT"
BASE COUNT          289 a          268 c          265 g          292 t
ORIGIN      
        1 gtagcattgt tgagatcatt gaaggtaagg tcgaggccat cgatcaataa cctattatat
       61 tgatctaact ccaaatgcac cgcgcccaaa gtcgtaaccg ttcctgatgt gcctaacatt
      121 tgaacattgt tggcggtaac ttcctgcttg atattattgc gttcgcaaaa cgccggaagt
      181 tgttcggcaa tatcccgcac cattttttga taacaatcgt agtttatctc atagataccg
      241 cattcctcag ccagcgtgac aacacccagc ggcagggata aaacatccaa aattttaaaa
      301 ttggcgaatt ctgactcttc tttttctggc ttttgcttgg cccaaacgat ttccgtactg
      361 ccaccgccaa tatcaaaaac cagcgcaaag ggaattgtgg cattgagcag gctctggcag
      421 cctttcagcg ccaggcgagc ctcttcgtcg cttgaaatgg tttcaaaatt gagatgggtt
      481 tcttgggcga cgcgagccag aaagtcgtca cagttggccg cccggcgaca ggcttcagtg
      541 gcaatattac gagattgcgc aacgtcaaac aactttagct tatcggcaca aattgaaagt
      601 gcggaaatcg ttcggtccat cgcatcatca gccagacggc cactctcggt aagcccttca
      661 cccaatcgca caatgctgga aaaggaggtt gcgacacgaa agccttgtcc aatcgggtgg
      721 gcgatcagca ggcggcaatt gttggtgccg agatctaggg cgctatacat gcgaggctta
      781 cgcttgcgga tgaaaccgta tttaccacgt ttacgcttcg gcgctttgga attaccgtcc
      841 ctgaaacttt cttttttgtc gttattattg ctcactgtga ggctcgtttt tttcatgttt
      901 ctttgacttg aattcaggtt agcctggaac gggagtgagc gaaacctcaa aatttgtgct
      961 aaacaaaaaa gggcggccca gaaaggccaa ccgtaacgat gtgagttagc aggaaatata
     1021 ttacatttga cgaatttcgg tgaggaaacc gtcaacctga gccccaagac tttccgacag
     1081 ttgggaaagt tcccgtgcga catccaatcg attg
//
LOCUS       DASCNL010000979         2093 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002020647, whole genome shotgun sequence.
ACCESSION   DASCNL010000979 DASCNL010000000
VERSION     DASCNL010000979.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002020647"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(104..871)
                     /locus_tag="QF359_12755"
     CDS             complement(104..871)
                     /locus_tag="QF359_12755"
                     /inference="COORDINATES: protein motif:HMM:NF024834.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HJO87824.1"
                     /translation="MKIPKLLQAVIVLAIVYYGFILVFDVILDHVIPSSLLTMYMFFV
                     VAGVFMVFTATEEGTRELVAPVKALVEDPNKKMIRNVVFIILPLLAGWYTFEKTSLSF
                     EAPVELRTIHPAPPTSMKAFGKRYNIIKLENPLRKLEKMDLKKFKEHVTAGAKVYIQN
                     CHFCHGDKLDGKGPYAAGLNPTPANFQDVGTIAQLQESYLFWRITTGGPGLPKEAAPW
                     ISSMPIWQNFLSEEEIWQVILFLYDYTGYQPRSFGHE"
     gene            complement(884..1696)
                     /locus_tag="QF359_12760"
     CDS             complement(884..1696)
                     /locus_tag="QF359_12760"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJO87825.1"
                     /translation="MKNFLKVAVFSLLIIFLFAGFANFGVPRIEPAPPPTEEKVDLSS
                     LTMDQFLVLGEKIYKGKGTCTLCHNALGGRAPLLEKAAAVSAARLNNSRYKGEATDIE
                     SYLVESMIKPSAFVVAGFGKKGTNDAVSPMPDVSTGSIGLNEVELAAVTAYLQDLSGV
                     EVTVKIPKDAGDSAEEEEEEQRKPYETVEDILSEVGCGACHKVGEDEGEQGPNLTKIG
                     ATRSAAHIRKSILDPNAELSKGFEKDLMPKDYGTQLYASELEMLVDYLAKLK"
     gene            complement(1693..>2093)
                     /locus_tag="QF359_12765"
     CDS             complement(1693..>2093)
                     /locus_tag="QF359_12765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87826.1"
                     /translation="VIIVISILIDSFMYKNAKEVAPLKWGRVPERSQYALFLLAVSFT
                     WLMGLMGYIRSGILQHWHVVNIMRDNSADAFTPTMGFAANVVSIGAIIFLSMVIFVFW
                     LSQISANKTEPQNYWVPEAVDGIASTGGKG"
BASE COUNT          532 a          539 c          506 g          516 t
ORIGIN      
        1 ttttgccgtt atcggcattg cccggtgcgg caatagcggg caagccgagc aaaattgtca
       61 gaagtgtaaa tgcggaaatt atcaatttca tgcgctcagc cccctactcg tgtccgaaac
      121 tacggggctg atacccggtg taatcataaa ggaataaaat aacctgccag atttcctctt
      181 cactgaggaa gttctgccag atcggcatag aagaaatcca gggcgcagct tctttcggca
      241 ggcccggccc gccggtggta atacgccaaa acaaatagga ttcctggagt tgcgcaatgg
      301 tgccaacatc ctggaagttt gccggtgtcg gattgagccc ggcggcataa ggccctttac
      361 catcaagctt atcgccatgg cagaagtgac agttctggat atagaccttg gcgcctgcgg
      421 tcacgtgttc tttaaacttt ttgaggtcca ttttttctag tttacgcagc ggattttcca
      481 gcttgataat attgtagcgt ttaccgaacg ctttcattga agttggtggt gccgggtgaa
      541 tggtgcgcag ttccactggc gcttcaaaac tcaggctggt tttctcgaac gtgtaccaac
      601 cggccagtaa tggcaggatg ataaaaacca cattgcggat cattttttta ttagggtctt
      661 cgaccagcgc tttgaccggc gcgaccagtt ctcttgtacc ttcctcggtc gccgtgaaca
      721 ccatgaagac gccggcgaca acaaagaaca tatacatggt tagcaggctc gacggaataa
      781 cgtggtcgag aataacgtca aaaaccagga taaagccata atagacgatg gcgagaacga
      841 taacggcttg caggagctta ggtattttca tatcaactcc tcgctatttc aatttcgcca
      901 aataatcgac cagcatttca agctcgctgg cgtaaagctg cgtgccgtaa tctttcggca
      961 tcaaatcttt ttcaaaccct ttggaaagct cggcatttgg atcaagtatc gattttctga
     1021 tatgagcggc agatcgagta gcaccgattt tggtcagatt aggcccctgc tcgccttcat
     1081 cttcgccgac cttgtgacaa gcaccacagc cgacctcgga caaaatatcc tctacggtct
     1141 catacggttt acgctgttct tcttcctctt cttcagcgct gtcaccagcg tctttgggaa
     1201 ttttaacggt tacttcaacg ccactcaaat cctggagata ggccgtaacc gctgcaagct
     1261 cgacctcgtt gaggccaatg ctaccggttg acacatccgg cattggacta acggcatcat
     1321 tggtgccttt tttaccaaac ccggcaacaa caaaggcgga tggcttaatc atcgattcga
     1381 cgagatagct ttcaatatcc gtcgcctcgc ccttgtaacg cgaattattt agacgcgcgg
     1441 cggagacagc cgctgctttt tcaagcaatg gggcgcggcc gccaagcgca ttgtggcaga
     1501 gcgtacacgt gcccttgccc ttataaattt tttcaccgag caccaagaac tgatccatgg
     1561 ttaaagaact gagatcgact ttttcctcgg tcggcggtgg tgccggttca atccggggaa
     1621 cgccgaaatt ggcaaagccg gcaaacagaa aaatgattag caggctgaaa acagcgactt
     1681 tgaggaagtt cttcatccct tgcctccagt cgaggctatc ccatcgaccg cttcgggcac
     1741 ccaataattc tgcggctcag ttttgttggc gctgatttgg ctcagccaga agacaaagat
     1801 caccatcgag agaaaaatta ttgcaccgat ggaaaccaca ttggcggcaa aacccatggt
     1861 tggcgtaaag gcatcggctg aattatcccg catgatatta acaacatgcc agtgctggag
     1921 aatccccgag cggatatagc ccatcagccc cattaaccag gtgaaagaaa ccgccagcag
     1981 gaacagcgca tattgcgaac gttccggcac ccggccccat ttgagcggcg cgacttcttt
     2041 ggcattttta tacataaagc tgtcgatcag aatactgatg acaatgatga cta
//
LOCUS       DASCNL010000980         1303 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002024830, whole genome shotgun sequence.
ACCESSION   DASCNL010000980 DASCNL010000000
VERSION     DASCNL010000980.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1303)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002024830"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            142..1242
                     /gene="lptG"
                     /locus_tag="QF359_12770"
     CDS             142..1242
                     /gene="lptG"
                     /locus_tag="QF359_12770"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HJO87827.1"
                     /translation="MRLSPILTIYIGRSFLANFFTVFVVFLGIIFLFDTVELLRRASS
                     HENVGLALVFQMGLMKLPFMAQQIFPFAVLFGGMVSFWRLTRSSELVVTRAAGVSAWQ
                     FLLPVLVVSLILGIIKISAFNPLASVMLAKYDRLNAIHLKGQSTLLAVSNNGLWLRQS
                     SGKNQSVIHAPKLTILNNEISLSEVSIFVYEGADKFVSRIDAKKGDLEDGFWYLRDVW
                     INITDKPPKFVKKHWVETDITLNNIHESFSPPETMSFWDLPDFIVNLERSGFSALRHR
                     LYWHRLLSAPLLLCAMALIAATFTLRQSHRGGATFVIVGGVLTGFLLYFLSDIIFALG
                     LRDSIPVVLAAWTPSGVSTLLGLAMVFHLEDG"
BASE COUNT          281 a          301 c          304 g          417 t
ORIGIN      
        1 cttgctctat gcatcaatca tcggccccat tttaatcgcc gcatttctac tgctctggca
       61 tcctcggttt ggcaaacgtg ctggtaaagt accgccatca gactttatcc aagccggtaa
      121 ggcctaggga gattatggaa aatgcgattg tctcctatat taaccattta tattggacgc
      181 agttttttgg ccaatttttt taccgttttt gttgtctttt tagggatcat attcttattc
      241 gacacggttg aattgctgcg ccgggcttcc agtcatgaaa atgttgggct cgctttggtt
      301 ttccagatgg gattgatgaa actccccttt atggcccagc aaatttttcc cttcgcagta
      361 ttgtttggag gtatggtgtc attttggcgg ttaacgcgca gtagtgagct tgttgttacg
      421 cgcgcagccg gtgtatctgc gtggcaattt ttactaccgg tgctagtggt ttctttgatt
      481 ttgggaatta tcaaaatctc ggcctttaat ccgctggcct ccgtgatgct ggcaaaatat
      541 gaccgcctta acgccattca cctaaaaggt caatcaaccc tgctcgccgt atcaaataac
      601 ggtctttggt tgcgccaatc cagcggcaaa aatcaatcgg ttattcatgc gccgaaatta
      661 accatcctaa acaacgaaat ctcgctatcc gaggtctcaa ttttcgttta tgaaggggct
      721 gataaattcg tttcgcggat tgatgcaaaa aaaggtgatc ttgaagatgg cttctggtat
      781 ctgcgggacg tatggataaa tataacggac aaaccgccaa agtttgtcaa aaaacactgg
      841 gttgaaacgg atattacgtt gaacaatatt catgaaagct tttcgccacc tgagacgatg
      901 tctttctggg atttgccgga ttttatcgtc aatcttgaac gttcaggctt ttccgccttg
      961 cgccaccgtc tatattggca caggttgtta tcagcaccgc tgttgctgtg tgccatggcg
     1021 ttgatcgcgg cgacattcac gttacgtcaa tcccaccggg ggggcgctac tttcgtaatc
     1081 gtcggcggtg tcttaacggg gtttcttttg tatttccttt cagatattat tttcgccctc
     1141 ggcttacgtg atagcattcc cgttgtatta gcggcctgga cgccgtccgg agtatcgaca
     1201 cttttgggcc tcgccatggt ttttcaccta gaggacggtt aagcctatgc gcttcccaga
     1261 ttttaaatac ctatcggtcg ttctggcttt tttgggcttt gcc
//
LOCUS       DASCNL010000981         1871 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002025401, whole genome shotgun sequence.
ACCESSION   DASCNL010000981 DASCNL010000000
VERSION     DASCNL010000981.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002025401"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="QF359_12775"
     CDS             complement(<1..225)
                     /locus_tag="QF359_12775"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJO87828.1"
                     /translation="MDYEDIIAERVEDWLESTINRPDKLNAMREKTAEEIFDALAGAE
                     GDRSCRAVILQGIPKAFCTGIDTSEFQIKDN"
     gene            complement(272..1036)
                     /locus_tag="QF359_12780"
     CDS             complement(272..1036)
                     /locus_tag="QF359_12780"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87829.1"
                     /translation="MSTENTVIELNQVDKFFGDHAAVKDLSFQVTKGEIVALVGRTGA
                     GKSTALHMIMGVQEPTKGSVRVEGLDPFRQFQELRGKLAVSFQTDRLLPWRRAWENVA
                     IGLQILGSDKAHQRSEAIKWLENVKIVGEENVNKYPHELSGGMRQRVSLARALSVDPE
                     LVLLDESFSQLDHVTSATLRADFKDLVSELKKTCVLITHRIDDALEMADRVLVLAAPA
                     QLALEVKVTDENRNDPAWLEEKHKAIAQMMGGEQDE"
     gene            complement(1033..>1871)
                     /locus_tag="QF359_12785"
     CDS             complement(1033..>1871)
                     /locus_tag="QF359_12785"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJO87830.1"
                     /translation="STKPQDSSDQTENSTIAVESPTPLASKKYFKRDVIANVVVVALI
                     LLTMEVWSKFTPEYIMPSVGKSSNYVVRIIGEDAIHILFTLFRLLLAVGFSLLVGSFI
                     GAIMGMLKNVGPFIKSAVIIDTGVPALSWMLFAVFWFKQPEMRVFFIMAMILIPFYAL
                     NVYDAIRALPTDLVEVVEIFRPSRWQVLRLLILPHVIPYILMTTKAIIGYATRMMVFA
                     ELVSVSTGMGARMGLAQNNFEMDGVIAWTVLLVILNLSVQALVALAEKHLLKWRPEVS
                     VR"
BASE COUNT          474 a          509 c          428 g          460 t
ORIGIN      
        1 gttgtctttg atttgaaact cgctggtgtc gatgcccgtg caaaaggctt tcggaatacc
       61 ttgcaagata acggcccggc agctgcggtc tccttctgct cccgccaaag cgtcgaaaat
      121 ctcctctgcg gtcttttccc tcatggcatt cagtttgtcg ggtcgattga tggtgctctc
      181 gagccagtct tcaacccgct ccgcaattat gtcttcgtaa tccattttct atttctcctt
      241 taagttaaac tcttcacctt tgcaggcaca atcattcgtc ctgttcgcca cccatcattt
      301 gcgcgatcgc cttatgtttt tcctcgagcc aggcgggatc atttcggttt tcatcggtaa
      361 ccttgacttc gagagccaat tgagcgggtg ccgccagcac cagaacgcga tcggccattt
      421 ccaaggcgtc atcgatgcgg tgcgtaatga gaacacacgt ctttttaagt tcggacacta
      481 gatccttaaa atcagcacgc aaagtagccg atgttacatg atcgagctgg ctgaaactct
      541 catctagcaa gactaattcc gggtccaccg aaagagcgcg ggcgagcgaa acacgctggc
      601 gcatgccgcc ggaaagttca tgaggatact tattgacatt ttcctcaccg acaatcttga
      661 cgttttccag ccactttatg gcctcgctcc tttgatgagc cttgtcactg cccagaattt
      721 gcagcccgat agccacattt tcccacgccc tacgccaggg caagagcctg tcagtttgaa
      781 aactaaccgc gagcttacca cgtaattctt ggaactgacg aaatggatca aggccctcca
      841 cccgcaccga gcctttggtc ggttcctgga cgcccatgat catatgcaac gctgtcgatt
      901 taccggcgcc ggtgcgccca accagagcaa cgatctcgcc ctttgttact tgaaaggaaa
      961 gatccttcac cgcagcgtgg tcgccaaaaa acttatcgac ctggtttagc tcgatgacag
     1021 tattttcggt actcatcgga ctgagacctc cggccgccat ttaagaaggt gtttttcggc
     1081 gagagcgacc aatgcctgaa ccgacaaatt gagaatcacc agcaagaccg tccaggcaat
     1141 cacaccgtcc atctcgaaat tattttgagc caatcccatt ctggcgccca taccagtcga
     1201 tacactgacc aactcggcga acaccatcat ccgcgtggcg taaccgataa tggctttggt
     1261 ggtcatcagg atataaggaa tcacatgagg taatattaat aaccgcagca cctgccaacg
     1321 gctgggacga aaaatctcta ctacttctac cagatcggtg ggaagagccc ggatggcgtc
     1381 atagacgttt agggcataaa atggaatcag gatcatcgcc atgatgaaaa agaccctcat
     1441 ctctggctgt ttgaaccaga aaacggcgaa gagcatccag gacagggccg gcacaccggt
     1501 gtcgataata accgcagatt taatgaatgg tccgacgttt ttgagcattc ccataatggc
     1561 accaataaag ctgccgacca aaagcgagaa tccgacagcc agcagcagcc gaaatagggt
     1621 aaagaggata tgaatggcat cctcgccaat aattctcacg acataatttg atgacttgcc
     1681 taccgacggc ataatgtatt caggtgtgaa tttgctccac acctccatgg tcaataggat
     1741 gagagctacc actacaacgt tagcaattac gtcacgtttg aaatatttct tactggcgag
     1801 cggcgtcggt gattctacag caatcgttga attttcagtt tgatccgatg aatcctgcgg
     1861 cttcgtactc a
//
LOCUS       DASCNL010000982         1162 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002026745, whole genome shotgun sequence.
ACCESSION   DASCNL010000982 DASCNL010000000
VERSION     DASCNL010000982.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1162)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1162)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002026745"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="QF359_12790"
     CDS             <1..207
                     /locus_tag="QF359_12790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HJO87831.1"
                     /translation="GHPIIGDPIYGSKDAKKLGNNVSETFQDAVNNLNRQALHAFLIG
                     FIHPVSGQKISFKSPLPRDILTLL"
     gene            complement(488..>1162)
                     /locus_tag="QF359_12795"
     CDS             complement(488..>1162)
                     /locus_tag="QF359_12795"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HJO87832.1"
                     /translation="QLDEARRDGQRILFEGAQGAMLDIDHGTYPFVTSSNTVAGAATV
                     GSGQGAKAANYNLGITKAYTTRVGSGPFPTEQENEVGQRLGERGHEFGTVTGRKRRCG
                     WFDTMMVRQAVKVSGITGIALTKLDVLDGFDELKVCTDYTIDGESIDHFPASIVGQSK
                     VEPVYETLEGWSEPTYGARSWAALPATAIKYIRRIEELIEAPVTLLSTSPEREDTILV
                     QDPFED"
BASE COUNT          287 a          313 c          264 g          298 t
ORIGIN      
        1 ggtcatccga tcattgggga cccaatttat ggttcaaaag atgccaaaaa attgggaaac
       61 aatgtctctg aaacgtttca agacgcggtt aacaacctca atcggcaggc tttacacgcc
      121 tttttaatcg gttttattca cccggtcagc ggtcagaaga taagcttcaa aagcccgctt
      181 cccagagata ttttgaccct tctgtaacgc aaaaattgcc attgtaacat tcgcttacac
      241 ttttacacac tacgtatctg gaccctgagg tgctctcgcg gcatcattaa ttaacgtttg
      301 gttatccgcc atgttctctg atcactcttc cagcatcagg tctataccaa tgccagtgta
      361 acatcgggac ctctatcgcg gtgcccatta tagcgtaatt gggcaggatt actccatcta
      421 acacataaac ggcaaacgaa tagaccttct tccatacagt ttgtcgcacg gtcaaattta
      481 aaaattctta atcttcgaac gggtcctgca ccaatattgt atcttcgcgc tcgggactgg
      541 tggaaagtag tgtaactggc gcttcaatta attcttcaat gcgccggata tattttattg
      601 ccgttgccgg cagagcggcc cacgagcggg caccgtaagt tggctcggac cagccttcca
      661 aagtctcata gacgggctcg accttcgatt ggccaacaat tgaagctggg aagtgatcaa
      721 tgctttcacc gtcgatcgtg taatcggtac aaactttcaa ttcgtcaaag ccgtccagca
      781 catcaagttt cgtcagtgcg ataccagtga tgccactgac tttaaccgcc tggcgcacca
      841 tcatggtgtc aaaccaacca cagcgccgtt tgcggcccgt gacggtgccg aattcgtgac
      901 ctcgctcacc cagtctctga ccaacctcgt tctcctgctc ggtcggaaag gggccggagc
      961 cgacacgagt ggtgtaagcc ttggtgatac cgagattgta gttggcggct ttagcacctt
     1021 gacccgagcc cacagttgcc gccccggcaa cggtatttga tgaagttaca aatggatagg
     1081 tgccatgatc gatatccagc attgcacctt gcgcaccttc aaacaaaata cgctggccat
     1141 cgcggcgggc ttcatccagt tg
//
LOCUS       DASCNL010000983         1054 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002028962, whole genome shotgun sequence.
ACCESSION   DASCNL010000983 DASCNL010000000
VERSION     DASCNL010000983.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1054)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1054)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002028962"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="QF359_12800"
     CDS             complement(<1..574)
                     /locus_tag="QF359_12800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HJO87833.1"
                     /translation="METLFLAILIILLIAALASGYPVAFALPGSAIITILLASIAGTL
                     FTGDSGAYFSQGDAIQWFNAAITNFRGIYFEVERDTLIAIPLFIFMGLMLQRSKVAED
                     LLITMAQLFGPVPGGLGIAVVFVGALLAATTGIVGATVIAMGLISLPVMLRANYNVPL
                     ATGTIAASGTLGQIIPPSIVLIILADQLSSA"
     gene            complement(592..>1054)
                     /locus_tag="QF359_12805"
     CDS             complement(592..>1054)
                     /locus_tag="QF359_12805"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HJO87834.1"
                     /translation="ELLIVVTRFIFSYEQAFMGDLVRFWYAALFLFASAYTLIEEGHV
                     RVDILYKGFSERGKAWSNAIGSLVLGLPLCWIILTRGLWGKSNLINAPLLTFEVTQSG
                     YGLYVKYIMAGFLLIYALSMMIQFTSYFLSNVAILIHEPDAHFHEEHRDLI"
BASE COUNT          326 a          248 c          260 g          220 t
ORIGIN      
        1 tggcgctcga aagctggtcg gccaaaataa tcagaacaat tgaaggcggg ataatttgcc
       61 ccagcgttcc ggacgcggcg atggtaccgg ttgcgagagg aacgttatag ttagcgcgca
      121 gcataaccgg tagtgaaatc aagcccatgg caattacggt agcgccgaca atgccggttg
      181 tggcggcgag cagagcacca acaaatacca cggcgatgcc gagaccaccc gggacaggcc
      241 caaagagctg cgccatggtg ataagcaaat cctcggcgac tttcgatcgc tgcagcatca
      301 agcccataaa gataaacagc gggatagcaa tcagggtgtc gcgttcaacc tcaaaatata
      361 tcccgcgaaa gttggtaata gctgcattga accattgaat ggcatcacct tgtgagaaat
      421 aggcgccgga atcgccggta aataacgtcc ctgcaatcga tgccagcaat attgtaatga
      481 tcgcagaacc gggtaaagca aaggccacgg gataacctga tgccaaggcg gcaatcaaaa
      541 gaataattaa aatggcgaga aataaagttt ccatgttttt ttataccgat cttagatcaa
      601 atcacggtgt tcttcatgga agtgggcgtc tggttcgtga ataagaattg ccacgttgct
      661 caggaagtag ctggtaaact ggatcatcat gctcaaggca taaatcagta agaatccagc
      721 cataatatat ttcacataaa ggccatatcc actttgagtg acttcaaatg tcagcagcgg
      781 cgcgttaatc aaattggatt ttccccacag tccacgcgtt agaataatcc aacagagtgg
      841 taagccgagt accagcgagc caatggcatt tgaccaggct ttgccgcgct cgctaaatcc
      901 cttgtagaga atatcaaccc gaacgtggcc ttcttcgatc aaggtgtagg cgctggcaaa
      961 tagaaataag gcggcatacc aaaaccgcac caaatcaccc ataaacgctt gttcgtagga
     1021 aaaaataaaa cgtgttacaa cgatcaagag ctcg
//
LOCUS       DASCNL010000984         6679 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002029718, whole genome shotgun sequence.
ACCESSION   DASCNL010000984 DASCNL010000000
VERSION     DASCNL010000984.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 6679)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6679)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6679
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002029718"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            630..2321
                     /locus_tag="QF359_12810"
     CDS             630..2321
                     /locus_tag="QF359_12810"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HJO87835.1"
                     /translation="MTTKLSIALAQINPTVGDVDGNIVLIREARAKAAAEGADMVVAG
                     ELTISGYPPEDLVLKPAFLDRLVEKVTALAAETDDDGPALIIGAPWRDEGKLYNAVML
                     LNQGEIAAIRYKHLLPTYGVFDEDRVFDRGPVPGPISFKGVRLGVMICEDMWEPDVTE
                     CLDESGAEILVVINGSPFEVDKPDQRLNLAVARITESGLPMAYVNLVGGQDELVFDGG
                     SFVLSADRELKIQMPTFRADQLNTVWSKSDQGWVCAPGEIEPARDKTDKMLAAVYQAM
                     VLGLRDYVTKNRFPGVILGLSGGIDSGLSAAVAVDAIGADKVHCVMMPSPYTSQESLN
                     DAAEQAGILDIDYDTVPILEAMKAFEGMLTPVFGETEADTTEENIQARARGLIVMAIS
                     NKLGYMPLTTGNKSEMSVGYATLYGDMCGGYSVLKDLYKTTVFNVSRWRNKNFITGFL
                     GPDGRVIPERVITKKPSAELKPDQFDEDSLPPYDVLDDILMSLIEGERAVVDIVAKGH
                     DPAVVRRVWHMLDRAEYKRRQAPPGVKISSRAFGRDRRYPITNGFTNLMWEIEGE"
     gene            complement(2343..2543)
                     /locus_tag="QF359_12815"
     CDS             complement(2343..2543)
                     /locus_tag="QF359_12815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87836.1"
                     /translation="MIKATQSIGRTLNNVIETAKDFAATASKEALDTANELLRQSEDL
                     REMLDNLLGRVDAGGVQSKAKN"
     gene            complement(2610..3545)
                     /gene="ftsY"
                     /locus_tag="QF359_12820"
     CDS             complement(2610..3545)
                     /gene="ftsY"
                     /locus_tag="QF359_12820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HJO87837.1"
                     /translation="MNEEKKSGWLSRLKTGLSRSSSALTQGINELFANRKLDDATIEE
                     LEEILITSDLGVATAASLTQKIAAERFDQEVTSEEIRTALAAEIATILEPVAIPLEPD
                     AGHSPHVILVCGVNGVGKTTTIGKLAQNYVQAGKKVVLAAGDTFRAAAIEQIQIWGER
                     TNCPVIATELGKDAAGLAFDALEQAKSMNADVLLIDTAGRLQNKSELMAELEKIIRVI
                     GKIDETAPHSSLLVLDATTGQYAHSQVEIFAEMIDVTGLIVTKLDGSSKGGVLVSLAE
                     KFGLPVHAVGVGEQANDLRPFKAQDFANSLLGLDS"
     gene            complement(3545..4798)
                     /gene="mtaB"
                     /locus_tag="QF359_12825"
     CDS             complement(3545..4798)
                     /gene="mtaB"
                     /locus_tag="QF359_12825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HJO87838.1"
                     /translation="MSKSPKVITLGCRLNAFESEIMRTQAENAGLENTVIFNTCAVTS
                     EAERQARQQIRKLRRENPDTRIIVSGCAAQIAPAKYGAMPEVDQVLGNEEKLKIESYS
                     PDKSQDKILVSDIMRATEIAGHLISGFQSRSRAFVQIQQGCDHRCTFCIIPFGRGNSR
                     SVPIDHIIDQVGHLTEQGYQEVVFTGVDISSYGGDLPGRPNLGQMTQCLLAAVPELQR
                     LRLSSLDPAVIDYQLMDLIAAEPRLMPHIHLSVQAGSDLILKRMKRRHNRQDIIDLCA
                     RIRRLRPEVVFGADLITGFPTESDTMFEDTLRLVDDAGLTYLHVFPYSLRLETPAANM
                     PQVADKVRKSRAAELRRKGEDTTAAYFEKLPGQTAKILVERNSQGYTETYAPVRLDQE
                     FEQGAIVSALITGSSPEGLIVELTP"
     gene            complement(4795..5589)
                     /gene="dapF"
                     /locus_tag="QF359_12830"
     CDS             complement(4795..5589)
                     /gene="dapF"
                     /locus_tag="QF359_12830"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014743687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HJO87839.1"
                     /translation="MHGLGNDFVILDGRGTPLEINAAQTQAIADRRRGIGCDQLILLE
                     ETAGNADLMMRIRNADGGEVEVCGNATRCVGQLIMDEKGTNQATIDTIGGVLTAIRAT
                     SGITVNMGPAYLEWQDIPLVSEMDTLALNMHEGPLSSPVAVGMGNPHAVFFVADAEAI
                     DLETVGPLLEHHALYPNRTNIEAAQIISRNQIRLRVWERGVGETEACGSGACAALVAA
                     ARRDLTGRKARVDLNGGILKIEWRNDNHVLMTGPTELSFTGTWMLS"
     gene            complement(5664..6356)
                     /locus_tag="QF359_12835"
     CDS             complement(5664..6356)
                     /locus_tag="QF359_12835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HJO87840.1"
                     /translation="MNYSSIEQRLSQNSLRCCGGFHPTSEDQNDTAILADFQTAIIVG
                     NAGNQTSFNFWQAFENAKEEDKNPLESWTRQTLTKIAGDLDAAVIFPFDGPPYIPILT
                     WAQKAEPVYPSPFGPLIHQKFGLWHAYRGVLLFKDKLDLPSFEIPASPCVDCAGQSCI
                     STCPVNAIEAGNFDIEVCIEFMASAKGNVCLQNGCLARRACPIGQEHVYEPAQAEFHL
                     TAFLKTFGPKFT"
     gene            complement(6414..>6679)
                     /locus_tag="QF359_12840"
     CDS             complement(6414..>6679)
                     /locus_tag="QF359_12840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87841.1"
                     /translation="KQLEVIKSGNNDLTAQEIYKLCSFFSVEANYIFDDLAEINNGNG
                     ELVFNAHQAKELRRLFDSYLNLPNRDMQKSLVRLTESVAQADM"
BASE COUNT         1585 a         1630 c         1754 g         1710 t
ORIGIN      
        1 gtaagcggca aggcgatccc cggtggccat ttccttgccg aagaggcgcc gcaagaaacc
       61 tatcgggcgc tgtctgaatt ttattaatac ttagccaaaa ttaaccttaa cccatttttt
      121 cgaatacgcg gtcgagttaa aaactgttaa accgatgtag tctttctcca gatccatccg
      181 cgatttcgga tcggctaatt cgtcgcgtag atcggcaaac atttcattgg ccagattttg
      241 gaagccgcct tcattaagtt ctcaatcttc atctaacgag agtttattgt tgactagagg
      301 aagaaactac tccgctcttt tttttatatc ttcaaagtaa ggtgcaaaag tcaccaaagc
      361 atcgaaacaa attttgtccc ccgacagcgc ctatggcact aaattgtagt atttgataag
      421 agagagtttc tggctcatcg taactgtata ggagttatga atgagacaga atatgagaac
      481 ccggggttct tcgtccgaga agacggtcaa agacatccgc cgcgcgacat gtattgactg
      541 ggttataggt gtcctctaat gcttacccgc tcaattgttg atggcccaac tggttggtat
      601 ggtgtttttg tttaattcgg gattagcgga tgaccacgaa actatcaata gcactcgcgc
      661 agattaaccc aactgtcggt gatgtcgatg gtaacatcgt gctaattcgt gaagcgcgcg
      721 ccaaggccgc tgccgaaggt gccgatatgg ttgtcgccgg cgagctaacc atcagcggct
      781 atccgcccga ggatttggtg cttaaaccag catttttgga tcggctggtg gaaaaagtaa
      841 cagcccttgc ggccgaaacc gatgacgatg gcccggcgtt gattattggt gctccctggc
      901 gagatgaagg caaactatat aatgcagtta tgctgcttaa tcagggtgag atcgcggcga
      961 tccgttataa acatctgttg ccaacttatg gtgtgtttga cgaagaccgg gtatttgatc
     1021 gtggaccggt accgggaccg atttccttta aaggggtccg gcttggagtg atgatctgtg
     1081 aggatatgtg ggagcccgac gtcaccgaat gtctcgatga atccggcgcc gaaattctgg
     1141 tggttatcaa tggctcgcct tttgaagtcg ataaaccgga tcagcgttta aatttggcgg
     1201 tggcgcggat taccgagtct ggtttaccca tggcttacgt caatttggtc ggtggccagg
     1261 atgaattggt atttgacggt ggctcttttg ttctctcggc ggatcgtgag ctgaaaattc
     1321 agatgcccac ttttcgagcg gatcagttaa atacagtttg gtcaaaatcg gatcaaggct
     1381 gggtctgtgc accgggagag attgaaccgg cacgtgacaa aactgataaa atgctggctg
     1441 cagtttatca agccatggtc ttgggcttgc gtgattatgt cactaaaaac cgttttccgg
     1501 gcgtgatact gggattatca ggtggaattg attctggtct ttcagcagcc gtcgctgttg
     1561 atgcaatagg cgcggataaa gttcactgcg tgatgatgcc atcaccttat acatctcagg
     1621 aaagtctcaa tgatgcagcc gagcaggcag gcatattgga tattgactat gacaccgtgc
     1681 cgatacttga ggcgatgaaa gcctttgaag gcatgctgac gccggtattt ggcgagaccg
     1741 aagctgatac gacggaagaa aacattcagg ccagggcgcg cggcttaatt gtcatggcga
     1801 tctcgaacaa gcttggctat atgccactca ccaccggaaa taaatccgaa atgtcggttg
     1861 gttatgcgac gctctatggt gatatgtgtg gtggctattc ggtcttgaaa gacctctata
     1921 agaccactgt ttttaatgtc tcccgttggc gtaataaaaa tttcatcacc ggtttcttgg
     1981 gcccggatgg tcgggttatc ccagagcgcg tgattactaa aaaaccctcc gctgagttga
     2041 aaccagatca gtttgatgag gatagcttgc caccttatga cgtacttgat gatattttaa
     2101 tgagcctgat tgaaggcgag cgggcggtcg tcgatattgt cgctaagggt catgatccgg
     2161 cagtggtacg ccgggtttgg catatgctgg accgggctga atataaacgg cgccaggcac
     2221 cccccggcgt gaaaatttca tcccgcgctt ttggccgcga tcgccgctac ccgattacca
     2281 atggcttcac caatctgatg tgggagattg agggggaata accagttgat tctctgcagt
     2341 ttttaatttt ttgcctttga ctgaacccct ccggcatcca ctcttcccaa cagattgtcg
     2401 agcatctccc gaaggtcttc cgattggcgg agcagttcat tggcggtatc aagcgcttct
     2461 ttggaggcgg ttgcggcgaa gtctttagcg gtttcaataa cgttatttaa ggtgcgacca
     2521 atagattgag tcgctttgat cacgcgttta gtgccgcctt ggatggtttc aatgcggtca
     2581 gcgacggatt gtcctgacgt tattaacttt tagctatcga ggccgagcag ggagttggca
     2641 aaatcctgag ctttgaaagg gcgcaaatca ttggcttgtt cgcccacgcc aaccgcatgc
     2701 accggcaggc caaatttttc cgccagtgag accagcacac cgcctttgga cgagccatca
     2761 agtttggtga cgattaagcc ggtgacgtcg atcatttccg cgaatatctc gacttgtgag
     2821 tgagcatatt gaccggtagt cgcatcaagc accagcaggc tgctatgggg agcggtttca
     2881 tcaattttgc cgataacgcg gatgatcttc tcaagctctg ccatcagctc acttttgttt
     2941 tgtagccggc cggcagtatc gatcaataga acatccgcat tcatggattt ggcttgttca
     3001 agcgcatcga atgccagccc ggcagcatcc ttaccaagct cggttgcaat caccgggcaa
     3061 ttggtgcgtt ccccccaaat ttgtatttgc tcaatcgcgg ctgcccggaa agtatcgccg
     3121 gcggctagca caactttctt gccggcctga acgtaatttt gtgcaagctt accgatggtc
     3181 gtggtcttgc caacgccatt gacgccgcac accaaaatta cgtgtgggct gtgtccggcg
     3241 tcgggctcaa gcgggatggc gaccggctcc aggatggttg cgatttctgc cgccagagct
     3301 gtgcgaattt cttccgacgt tacttcctga tcaaatcgct cagcagcaat cttctgggtc
     3361 aggctcgctg ctgtcgctac gcccaaatcc gaggtgatta aaatttcctc aagctcttca
     3421 atcgtggcgt catccaattt gcggttggca aatagttcat tgatgccttg ggtgagagca
     3481 gaggaagacc ggctaaggcc ggttttaagg cgggacagcc agccggattt tttttcttca
     3541 ttcattatgg tgttaattcc acaatcaaac cttcgggcga gctgccggtg atcagagccg
     3601 agacaatagc gccctgttca aattcctggt ccaaccgaac aggggcatag gtttcggtgt
     3661 aaccctgact gttgcgctcg actagaattt ttgccgtttg acccggtagt ttttcaaaat
     3721 aggcggcagt agtatcttcg cctttgcggc ggagctcggc agcgcgggat tttcgaactt
     3781 tgtctgccac ctgaggcata ttggcggccg gagtttcgag ccggagtgaa taggggaaga
     3841 catgaagata ggtcaggcct gcgtcatcaa ccagccgcag ggtgtcttcg aacatcgtat
     3901 cactttcggt cgggaatcca gtaatgaggt cagcaccgaa aaccacttcc ggccgcaatc
     3961 ggcgaatgcg ggcacaaaga tcaatgatat cttgccgatt gtgacggcgt ttcatgcgct
     4021 tcaaaattaa atcactgcca gcctgtacac tcaaatgtat atgcggcatc agacgcggct
     4081 cggcggcaat taaatccatc agctgataat caattacagc gggatcgaga gagcttaggc
     4141 gcaagcgttg caattcgggc acggcggcca ggaggcattg ggtcatttgc ccgagattag
     4201 ggcggcctgg caaatctccg ccataagaag atatatcaac gccagtgaac accacttcct
     4261 gatagccctg ctcggtcagg tgaccaactt gatcaatgat gtgatcgatc ggcaccgagc
     4321 ggctgttgcc gcggccaaag ggaatgatac agaaagtgca gcgatggtcg cagccttgtt
     4381 gaatttgcac aaaagcgcgc gagcgcgact gaaacccgct gatcaaatga ccggcgatct
     4441 cggtggcccg cataatatct gaaactaaaa tcttatcctg tgatttgtcc ggcgaataac
     4501 tttcaatttt gagcttttcc tcattgccca gcacctgatc aacctctggc atggcgccat
     4561 atttggcggg tgcgatttgt gccgcacagc cggagacgat gatgcgggtg tccgggtttt
     4621 cacgccgcag ttttctaatt tgctgacgag cctgacgctc agcctcagag gtcacggcgc
     4681 aggtattgaa aatcaccgta ttctccaagc cagcattttc agcctgcgtt cgcataattt
     4741 ctgactcaaa cgcattgagg cggcagccta aggtgatgac tttaggtgat ttgctcatga
     4801 caacatccag gtgccggtaa aactcaattc ggttggaccg gtcatcagca catgattgtc
     4861 gttacgccac tcgatcttca agatgccgcc attgaggtca acacgggctt tgcggccggt
     4921 aagatcacgc cgggcagctg cgaccaaggc agcacaggca ccggaaccac aggcttcagt
     4981 ttccccgacg ccacgctccc aaacgcgcaa gcgaatttgg ttgcgggaaa tgatctgcgc
     5041 cgcttcgata tttgtccggt tggggtaaag cgcatggtgt tctagaagtg gtccgaccgt
     5101 ctcaaggtca atcgcttctg catcggcgac aaaaaatacg gcatgaggat tgcccatacc
     5161 aacggcaacc ggactgctca atggcccttc atgcatattg agagcgagcg tatccatctc
     5221 gctaaccagc ggaatatcct gccattccag ataggccggc cccatattga cagtaatacc
     5281 agaagtcgcc cggatcgccg tcaatacacc gccaatagta tctatcgtcg cctggttggt
     5341 acctttttca tccatgataa gctgaccaac acagcgcgtc gcattaccgc aaacttcaac
     5401 ttctccgcca tcggcgttgc gaatgcgcat catcagatcg gcatttcctg cggtttcttc
     5461 gagcaggatc aattggtcgc aaccaatacc gcgccggcgg tctgcaatcg cctgcgtttg
     5521 ggccgcatta atttccagcg gcgtgccgcg gccatccaaa atgacaaagt cattgccgag
     5581 gccgtgcatt tttataaatt tcaatgccgt cataaggggc gatatagaac cgatagggtc
     5641 aggagtccac ctgatttcgc gctttatgtg aattttggtc caaaggtttt aagaaaggct
     5701 gtcaggtgaa attctgcctg ggccggctcg tagacgtgtt cttgaccgat tgggcaggcg
     5761 cggcgagcca aacagccatt ttgcaaacat acatttccct tagccgaggc cataaattcg
     5821 atacacacct cgatatcgaa attgccagcc tcaatagcgt tgacgggaca ggtcgaaata
     5881 caggactgtc cagcacaatc cacacatggc gaagcaggga tctcgaatga cggtaagtcc
     5941 aatttgtcct taaataacag caccccccga taggcatgcc agagaccaaa tttctggtga
     6001 attagtggcc caaagggcga tgggtatacc ggttcggcct tttgtgccca ggtcaggatg
     6061 ggtatatagg gtggcccgtc aaacgggaaa atcacggcgg cgtccaaatc cccggcaatt
     6121 ttcgtcagtg tttgacgggt ccagctttcc agcggatttt tatcctcttc tttggcgttt
     6181 tcaaaagcct gccaaaaatt aaagctggtt tgattgcccg cgttgccgac gataatggcg
     6241 gtttgaaagt cagctaaaat ggcggtgtca ttttggtcct ctgaggtggg gtgaaatccg
     6301 ccgcaacagc gcaggctgtt ttggctgagg cgttgttcga tactggaata gttcatgccc
     6361 tatcttagca aaatacaacg gtcccggtaa aagaccaatt taacctggat gacttacatg
     6421 tcggcttggg cgacggattc ggtgagtcgg acgagagatt tctgcatgtc acggttgggc
     6481 agattgagat atgaatcgaa tagccgtcgc aactccttgg cttggtgagc attgaatacc
     6541 aactctccat tgccgttgtt aatctcggcg agatcatcaa aaatgtaatt ggcttcgact
     6601 gaaaagaacg aacacaattt ataaatttct tgagccgtta aatcattatt gccgctttta
     6661 atcacttcca attgcttat
//
LOCUS       DASCNL010000985         3267 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002030673, whole genome shotgun sequence.
ACCESSION   DASCNL010000985 DASCNL010000000
VERSION     DASCNL010000985.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3267)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3267)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3267
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002030673"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(157..474)
                     /gene="groES"
                     /locus_tag="QF359_12845"
     CDS             complement(157..474)
                     /gene="groES"
                     /locus_tag="QF359_12845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HJO87842.1"
                     /translation="MGFKPLHDRVLVRRVEEETKTTGGIILPDTAQEKPSEGEIVATG
                     GGLRNDDGTVTPLDVKVGDRVLFGKFGGTDVKVDGEDLMILRESDILGIVDKPKKRAK
                     KAA"
     gene            775..1044
                     /locus_tag="QF359_12850"
     CDS             775..1044
                     /locus_tag="QF359_12850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Usg family protein"
                     /protein_id="HJO87843.1"
                     /translation="MTKNSIENQLRGYRLTMAEIIYHLPDYPDLLQSFIWQTMDTAPA
                     FPSIRKLLRHWEDNLEGKLHSAKVISTSLIKPSEFQLIDHSWQLH"
     gene            complement(1046..1714)
                     /locus_tag="QF359_12855"
     CDS             complement(1046..1714)
                     /locus_tag="QF359_12855"
                     /inference="COORDINATES: protein motif:HMM:NF020893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HJO87844.1"
                     /translation="MTPKVIIRSLVMIGLLVALGFLLKSSGLGEIIDKDWIDVHIRNN
                     GLEGQLLYLGAASILVAAGFPRQIVSFLGGYAFGLNFGFVLALAACGIGCTLAFFFAR
                     IVGRNWVSSKFPRRLEKADQFLSANTFLTTLLIRFMPVGSNLVTNLVAGVSGAKAPAF
                     IGGSTLGYIPQTVIFALLGSGFNLEHEFQITLSVALFLCSIVLGIFLYRKYKRSAVLN
                     ADLD"
     gene            complement(1711..2484)
                     /locus_tag="QF359_12860"
     CDS             complement(1711..2484)
                     /locus_tag="QF359_12860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJO87845.1"
                     /translation="MVEQVNDTNIQSAPALSVVVPVHNEVENIEPLIAEIMATLEGVE
                     RYEIIYINDCSRDSTLERLTSLDQKFEVLRVLTHQKRSGQSAAIRTGVKAARGDLIAT
                     LDGDGQNDPEDIPKLLKAYREQAVADARILIAGFRARRQDSFIKRLSSKIANGIRSSL
                     LGDATPDTGCGLKIFRREDFFDLPGFDHMHRFLPALMIRNGGQVISVEVSHRPREHGK
                     SKYGTLDRLWVGIMDLIGVMWLKRRPINPSVNSHVEENK"
     gene            2677..3111
                     /locus_tag="QF359_12865"
     CDS             2677..3111
                     /locus_tag="QF359_12865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HJO87846.1"
                     /translation="MADGKVEGYAGDLTPEETWKILKNEQSAMLIDVRTAAEWNYVGV
                     ADLSNMGKEQLTISWVTFPGDQKNENFIAEVEAACPDKDAKVISICRSGVRSISTSTA
                     LTEAGYTQAYNVLEGFEGDKNDDEHRGNTGGWKVRGLPWKQK"
BASE COUNT          943 a          799 c          702 g          823 t
ORIGIN      
        1 cccttcgggc ccaaggttac tctgaccgca tcggccagaa catcaacgcc ggtcaacatc
       61 ttggcccgcg cttcggcatc aaatattact tccttcgcca tcttaaaaat tctccatagc
      121 gttaaattaa attaattaaa aaagaccggc ttataattaa gcggccttct tagctctttt
      181 ctttggttta tcgacaatac cgagaatatc ggattcgcgg aggatcatca gatcttcacc
      241 atcgacttta acgtcggtgc cgccaaattt accaaacaga acccggtcac ctactttgac
      301 atccaaaggc gtaacagttc catcatcatt tctaagaccg ccgccggtag cgacaatttc
      361 accttcagat ggtttttcct gagcggtatc cggcaggata attcctccag tagtttttgt
      421 ttcttcttca acgcggcgaa caagcacacg atcatgcaac ggtttaaaac ccattgtttc
      481 ctccaattaa tctaaaaact ttcaataatt ctttgaaata ctggcctgta ttcccgagcg
      541 ttagcactct cggttcgaga ctgccagaaa tttagtctgc aaatcgctaa cgtcaagcct
      601 aataaagtag aaatttgaaa aaaatttaga ccatgctggc ggcaaaattg gcagcactct
      661 ccaatgctag ctgataaacc attgaattac aacaagtttt atcatttaga attaaattat
      721 tttgcgaatc ggcgcaagct tctcatccct gatttaattt aaaatgaggg agtaatgact
      781 aaaaattcaa ttgaaaacca acttcgaggt taccgcctca caatggcgga aattatttat
      841 catctgccgg attatccaga tctcctgcaa tctttcattt ggcaaaccat ggatactgct
      901 ccggcttttc catccataag aaaattatta cgccattggg aagacaattt ggaaggcaag
      961 ctacattccg ccaaagtgat aagcaccagc ttgatcaaac caagtgagtt tcagttgatc
     1021 gatcattctt ggcaactgca ctaatttagt ctaggtcagc attgaggacg gctgagcgtt
     1081 tgtatttgcg gtaaagaaaa atacccagca caatagagca caggaaaaga gcaacgctga
     1141 gcgtaatctg gaactcgtgt tctaaattaa agccgctacc aagcaaggca aaaattaccg
     1201 tctgcggaat ataaccaagc gtcgagccgc ctataaatgc tggtgccttt gctcccgaaa
     1261 caccggcgac taaattcgtc accagattgc tgccaacggg cataaagcgg atcaacagcg
     1321 tcgtcaaaaa tgtattggcg ctcaaaaact gatcggcttt ttcaaggcgg cgcggaaatt
     1381 tcgaactcac ccaattgcgt ccgactatgc gggcaaagaa aaaagccaga gtgcagccga
     1441 tcccacaggc agcgagcgcc aagacaaatc caaaattcaa gccaaatgca tagccgccaa
     1501 gaaaggaaac aatttgacgc ggaaaccccg cagccaccaa aatcgacgcc gcacctagat
     1561 acagcagctg accttcaagc ccgttattgc ggatatgaac atcaatccaa tctttatcga
     1621 tgatctctcc gagccccgat gacttgagta aaaagccaag tgcgaccagc aggccgatca
     1681 ttaccaggct gcgtataatt acttttggtg tcatttattc tcttcaacat gagaatttac
     1741 acttggattt atggggcgac gctttaacca catcacgcca attagatcca ttattccgac
     1801 ccataagcga tcgagcgtgc catatttcga tttgccgtgt tcccgaggcc ggtgggatac
     1861 ctcaaccgag ataacttgac cgccattgcg tatcatcagc gccggcaaaa accggtgcat
     1921 atgatcaaag cccggtagat caaaaaaatc ctcgcggcgg aatatcttaa gaccacagcc
     1981 ggtatcaggt gttgcatcac cgagtaggct agagcggatg ccattggcaa tttttgaaga
     2041 taggcgtttg ataaaactgt cttggcgcct ggcgcgaaag ccggcgatta gaattcttgc
     2101 atccgcaact gcctgctccc gataggcttt aagcaatttc ggaatatcct ccggatcgtt
     2161 ttgaccatca ccgtcgagtg ttgcaatcaa atccccacgc gccgctttaa cgccggttcg
     2221 aatggcggca ctttggccgg aacgcttttg gtgggttaga acacgcagga cctcaaattt
     2281 ttgatctagt gatgtaagcc tttccagcgt gctatctcgg ctacaatcat tgatatatat
     2341 tatttcgtaa cgctcgacgc cctcaagcgt cgccataatt tctgcaatga gcggctcgat
     2401 attttcgacc tcattgtgga ctggcacgac aacagaaagc gctggtgcgg actgaatgtt
     2461 agtatcgttt acctgctcga ccatatccga ctgcaaatct ttaaataatg aagcgggttg
     2521 tacaccgctg tttgatttgt tgaaaggcca tttccaataa agttccccac tctagtgttg
     2581 gaacaatgtt cttttaaacg ctataacctt gcccgagtat tactataacc ttgcctgagt
     2641 attaataaat gcagtttttc tattgggaga gaaaatttgg ctgacggaaa agtcgaaggc
     2701 tatgcgggtg acctgacgcc cgaagagacc tggaaaatcc tcaaaaatga gcaaagcgcc
     2761 atgttaattg atgtgcgcac tgcggctgag tggaactatg tcggggtcgc tgatctctca
     2821 aacatgggta aagaacagct gacaatttcc tgggtcacct tcccgggcga ccaaaaaaat
     2881 gaaaatttta ttgccgaagt cgaagctgct tgtccagaca aagatgccaa agtaatctca
     2941 atttgccgct cgggagtacg ctcaatctca acttcaaccg cccttaccga agccggttat
     3001 acccaggcct ataatgtgct tgagggcttt gaaggcgaca agaacgatga cgagcaccgc
     3061 ggcaataccg gtggctggaa agtccgcggc ctgccgtgga agcagaagta atagattttg
     3121 aaccacgaag tttacttaca aagagcacaa agattaataa accaccgagg tcaaattaaa
     3181 cgcagataac taggttggtc ggcggtaccg aaaccaactg tgttccgtat cccctctgag
     3241 cctttggtca aattgcagat attaatg
//
LOCUS       DASCNL010000986         1916 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002031104, whole genome shotgun sequence.
ACCESSION   DASCNL010000986 DASCNL010000000
VERSION     DASCNL010000986.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002031104"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="QF359_12870"
     CDS             complement(<1..255)
                     /locus_tag="QF359_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015088440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HJO87847.1"
                     /translation="MLKKLSVSTLVFGLAAGAFMIDASGADAAGKRQFIAIGTGGPTG
                     VYFVTGNAICRMVHRAAAEGRSKGRKHGIRCSAPSTGGSNY"
     gene            complement(493..1833)
                     /locus_tag="QF359_12875"
     CDS             complement(493..1833)
                     /locus_tag="QF359_12875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HJO87848.1"
                     /translation="MTNVFHRNPQNEPPIAVDVRGMYLINANGKEYIDASGGAAVSCL
                     GHGDPEVTKAIQAQAEKLAFAHTGFLSSEPAEQLADLLIEKAPSEYGKVFYVSGGSEA
                     VESALKLARQYHLENGEPQRRHIIARQQSFHGNTLGVLAAGGNQWRRKQFEPLLIEVS
                     HISPCFAYRGQQDGESEEAYGQRVANELEAEIIRLGEDSVAAFVAETVVGATAGAVPP
                     VPGYFKRIREICDTYGVLLILDEVMCGLGRTGSFFAFEQEDIIPDMVTMAKGLGGGYQ
                     PIGALLCTTKIYEMIYNGSGFFQHSHTYMGHPIACAAALAVMTAIFKRDLLANVNEMG
                     DYLAARLDEALGQHPHVGDIRGRGLFCAIELVQDSETKEPFDPGLKINAKIKKATFED
                     GMICYPMGGTIDGVNGDHVLLAPPFIATKNDIDNIVDKLSRSMHSVINSINLKE"
BASE COUNT          498 a          497 c          418 g          503 t
ORIGIN      
        1 gtaattggaa ccaccggttg aaggcgccga gcaccggatg ccatgtttgc ggccctttga
       61 acggccttca gctgccgccc tgtgcaccat ccggcaaatg gcgttaccag ttacaaaata
      121 gacaccggtc ggaccgccag taccgattgc aatgaattgg cgttttccgg ctgcatcagc
      181 accagaagca tcgatcataa aggcgcctgc tgccaatccg aaaaccagtg tcgatacgga
      241 taattttttc aacatatttt ttctcccgat tagtttagtt aatttataaa aggtccttat
      301 ttgtgacacg gaaaaattgg cacaagcctg ataaacttta ccaagacaat ccacacgcac
      361 tcacactatt tagggagctt cacaatttta gatcgaaaat tgttctgacc tccctagtat
      421 caaggtcagg cgcataggtt ttcctatgtc gcttggggat taccctaaac cgtgctgggt
      481 ttccgactca agttattctt ttaaattaat tgaattaatt accgaatgca ttgaacgtga
      541 caatttgtcg acaatattat cgatgtcgtt tttggttgca atgaaaggcg gcgcaaggag
      601 aacgtgatcg ccgttgacgc catcgatagt gccccccatc gggtaacata tcatgccatc
      661 ttcaaaggtg gctttcttta ttttcgcatt aattttcaac ccgggatcaa aaggttcttt
      721 ggtttcgctg tcctgcacca gttcgattgc acaaaataag ccacgcccgc ggatatcacc
      781 gacatgagga tgttggccca acgcttcatc taatcgcgcg gcgaggtaat ctcccatttc
      841 gttcacgttt gccagtagat cgcgcttaaa tatcgctgtc ataacagcca gcgccgccgc
      901 acaggcaatc ggatgtccca tataagtgtg gctgtgctga aaaaatccgg aaccgttata
      961 aatcatctcg taaattttag tcgtgcacaa aagcgctccg atgggctgat agccgccgcc
     1021 caaccccttt gccattgtaa ccatatccgg aataatatct tcctgctcaa aggcaaaaaa
     1081 cgaacctgta cgcccgagcc cacacataac ttcatccaat attaataaca caccgtaagt
     1141 gtcacaaatc tcgcgaatac gtttgaaata gccgggtact ggcggtaccg ctcctgccgt
     1201 cgcgccgaca acggtctcag ccacaaaggc cgccacgcta tcttcgccaa gccttataat
     1261 ttctgcttcc agttcgttgg caacacgttg gccgtaggct tcttcactct caccatcttg
     1321 ttgtcctcga taagcaaaac acggtgagat gtgagaaact tcgatcagca acggctcaaa
     1381 ttgtttgcgc cgccattgat tgccgcctgc cgccaacacg cccagcgtat tgccgtgaaa
     1441 actttgttgc cgggcgataa tatgacgtcg ttgcggttcg ccgttttcaa gatgatactg
     1501 gcgggcaagt ttgagtgctg actcaacagc ttcggaccca cccgacacat aaaagacttt
     1561 accgtattcc gatggtgcct tttcgattag cagatctgcg agttgctctg ccggctcact
     1621 gcttaagaaa ccggtatgag caaaggctaa tttttcggct tgagcttgaa tagctttagt
     1681 gacttctggg tcaccatgcc caaggcatga tactgccgca ccacccgacg catcgatata
     1741 ttctttgccg ttagcattaa tcaaatacat cccccgcaca tcgacggcaa ttggcggctc
     1801 gttttgtgga ttacgatgaa aaacattggt catgttaatt ttgtgccgtt agactggatt
     1861 aagtagatta aatcgaacac caaaaggcga caacgagtac catggatatc aaagat
//
LOCUS       DASCNL010000987         1097 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002031937, whole genome shotgun sequence.
ACCESSION   DASCNL010000987 DASCNL010000000
VERSION     DASCNL010000987.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002031937"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(168..503)
                     /gene="rplV"
                     /locus_tag="QF359_12880"
     CDS             complement(168..503)
                     /gene="rplV"
                     /locus_tag="QF359_12880"
                     /inference="COORDINATES: protein motif:HMM:TIGR01044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HJO87849.1"
                     /translation="MAIARTKNVGISDYKLRLVIDQIRGKMVSDAIPMLRYMTSPAAA
                     EILKILNAATANAENNDLQSRADLKIVRITADKATWIRRFRPKARGRVGAFDRPTSHI
                     TIEVDEVRV"
     gene            complement(506..784)
                     /gene="rpsS"
                     /locus_tag="QF359_12885"
     CDS             complement(506..784)
                     /gene="rpsS"
                     /locus_tag="QF359_12885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006784434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HJO87850.1"
                     /translation="MSRSIKKGPYVDPKLMKKVNAIQAAGSRDVIRTWARASMIMPEM
                     VGLTIAVHDGRRFIPILITENMVGHRLGEFAPTRTFRGHIGRSDRVTG"
     gene            complement(821..>1097)
                     /gene="rplB"
                     /locus_tag="QF359_12890"
     CDS             complement(821..>1097)
                     /gene="rplB"
                     /locus_tag="QF359_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592343.1"
                     /note="one of the primary rRNA-binding proteins; required
                     for association of the 30S and 50S subunits to form the
                     70S ribosome, for tRNA binding and peptide bond formation;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HJO87851.1"
                     /translation="SECSATVGQVSNLDHKNQKLGKAGRNRHRGRRPTVRGSVMSPAA
                     HPHGGGEGRSGIGMPGPKTPWGKPALGKRTRRNKSTNKFILRRRYDR"
BASE COUNT          264 a          296 c          232 g          305 t
ORIGIN      
        1 ggagattgca ccagattcgg catagcgttc gtcaatcaaa ctgcgaatag cctgatcttc
       61 ttcagttaaa ctccgatagt ctgaggcctt actagcaaac caatgtgctc gccaatcctg
      121 tacgcctccg agccgaaacc caatggggtg tgtcttttgt cccatattta gacccttacc
      181 tcatcaactt caatggtaat gtgagatgtt ggcctatcaa atgcgccaac acgcccacgc
      241 gctttcggcc tgaaacgtcg aatccaagtt gccttatctg ctgtaatacg cacaattttc
      301 aaatcggcac gagactgaag atcattgttc tcagcattag cagtcgcagc attaagaatt
      361 ttcaatattt cggctgcagc aggactagtc atgtaccgga gcatcggaat cgcgtcactg
      421 accattttgc ctcgaatctg atctattaca agacgaagtt tataatcaga aatacctacg
      481 ttttttgttc ttgcaattgc catgattaac ctgttacccg gtcagatcta ccgatatggc
      541 cacgaaaagt ccgagtcgga gcaaattcac caagcctatg acctaccatg ttctcagtga
      601 tcaatatagg tataaaccgt cgaccatcat ggacggcaat tgtaagacca accatttcag
      661 gcattatcat cgaagctcgt gcccatgtcc gtatgacatc tcgcgatccc gccgcctgta
      721 ttgcgttaac ttttttcatc aattttgggt ctacgtaagg accttttttg attgatcttg
      781 acatctgttt tcatctggac tgccaactac ctgacggttt ctagcggtcg tacctccgcc
      841 tcaaaataaa tttattcgta ctcttattgc ggcgcgtccg tttgccgagc gccggcttac
      901 cccacggagt cttaggaccg ggcattccga tgccggagcg accttcgccg ccaccatgcg
      961 gatgagcagc tggactcatc actgagccgc gaaccgtagg gcgtcgaccg cgatgtcggt
     1021 ttctgccggc tttacctaat ttttgattct tatggtccag atttgaaacc tgacccaccg
     1081 tggctgaaca ttcactc
//
LOCUS       DASCNL010000988         1866 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002032646, whole genome shotgun sequence.
ACCESSION   DASCNL010000988 DASCNL010000000
VERSION     DASCNL010000988.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1866)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1866)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002032646"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(390..1652)
                     /locus_tag="QF359_12895"
     CDS             complement(390..1652)
                     /locus_tag="QF359_12895"
                     /inference="COORDINATES: protein motif:HMM:NF013381.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HJO87852.1"
                     /translation="MDGQQKSGEALLAERKKRIYDTVALREPDRVPSMLHSTFWAATQ
                     AGMTCEQAMRDYKGLSDAMRKAILDLQPDAYVPCHLMLSLAPTMEILDYKQLEWPGHG
                     DLSPDVTFQYIDREYMKADEYDDFITDPTGFYLRQYLPRLAGELEPLANLPEFPSIYF
                     TRVMHALAFMADPEIRKALETMIKAGEEMQKMLGEAFSFIAEMEELGYPLANVASGHA
                     PFDVVSDYLRGSKGGMLDMFRHEERVLKTLDILTEYIPRTMIKTASRLPGKIVFIPLH
                     WGLDGFMSPDQFDKFFWPSLRQVIVVLIENDLIPCVLWEGDCETRLETIADVPAGKCI
                     YWFERTDVFKAKEVLGDTVCIRGAVPASMLNTATPDDVKEFCKKLIDVVGKGGGFIMD
                     CGIGVPDEAKYENVKMMFDFTREYGVYS"
BASE COUNT          498 a          503 c          410 g          455 t
ORIGIN      
        1 tggccctctc aaagcgataa ccggccgtca gggacgtaga cctgcgccaa atattatagc
       61 cggtctccac cttcctacct tggcgaatcg agaccgcgta tgccgtatcg gggacccgaa
      121 tgtattctcc cccgacgtcg atttcagcat aaatgccggg gagctcttgc gccaccgcag
      181 cggggccaca caggatcgac aatcaacaaa gacgaaaaat tttcccaaaa tcagacaatg
      241 cagccctccc atgacgactg tcgagattat tagccgtaat tacttcctac ggcttgtaca
      301 caatattctt tattggcgag cttattgcca gctattctag acaaagcaga ctttagcaca
      361 atggctttgg tttattgcaa acccggccgt cagctgtaaa caccgtattc cctggtgaag
      421 tcgaacatca ttttgacgtt ttcgtatttt gcttcatccg ggacaccaat accgcaatcc
      481 ataataaagc caccgccttt accaaccaca tcaataagct ttttacagaa ctctttgaca
      541 tcatcaggcg tggcggtatt caacatcgat gccggcacgg cgccacggat gcagacagta
      601 tcacccagca cttctttggc tttaaacaca tcggtgcgtt caaaccagta aatacattta
      661 cctgctggca catcagcaat ggtttcaagc cgggtttcac aatcgccttc ccataaaacg
      721 cagggaataa gatcgttttc aatcaatacc acgatcacct gacgaagcga cggccagaaa
      781 aacttgtcga actgatcggg cgacataaaa ccgtccaacc cccagtgcaa agggataaaa
      841 acgatcttac ctggaagtcg actagcagtt tttatcatgg tccggggaat atattcggtc
      901 aggatatcca gggttttcaa cacacgctct tcgtgacgga acatatcgag catgccgcct
      961 ttggagccgc gcaaataatc ggacaccaca tcgaacggcg catgaccact cgcaacattg
     1021 gcaagcggat agcccagctc ttccatctcg gcgataaaag agaacgcctc gcccagcatt
     1081 ttttgcattt cttcaccggc cttgatcatg gtttcaagcg ccttgcggat ttccgggtcg
     1141 gccatgaagg ccagcgcatg cataacccgg gtaaaataaa ttgacggaaa ctcgggtaga
     1201 ttggctaggg gctccagttc gccggccaag cgtggcaaat attggcgcaa ataaaatccg
     1261 gtcggatcag tgataaaatc atcatattcg tcggccttca tatattcccg gtcgatatac
     1321 tgaaacgtca catcgggact gagatcacca tgacctggcc attccaattg tttgtaatca
     1381 agaatttcca tggttggggc cagtgacagc attaaatgac aaggcacata ggcatcgggt
     1441 tgcaaatcca ggatcgcttt ccgcatcgca tcagacagac ctttgtagtc gcgcattgcc
     1501 tgttcacagg tcataccggc ttgggtggcc gcccaaaatg tagaatgtag cattgagggc
     1561 acccggtcgg gctcccgtag cgccaccgtg tcatagatac gcttttttcg ttctgccaaa
     1621 agcgcttcac cagatttctg ttgtccgtcc atcaatccct ccccttagat gtccaccagc
     1681 tggtgaattc atctgccagt tatcttaggc caagcaaatt ttgaggcaac ataattaaaa
     1741 tccagcgagt acaatcgggc agcgcaaatg atggctaatc ttcaaaattg tttttagtta
     1801 ttgattttag gcgcccgttt gctgattatc atcaaacaca tcaccaggag ttaaaccatg
     1861 ccactc
//
LOCUS       DASCNL010000989         2305 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002034694, whole genome shotgun sequence.
ACCESSION   DASCNL010000989 DASCNL010000000
VERSION     DASCNL010000989.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002034694"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /gene="mobB"
                     /locus_tag="QF359_12900"
     CDS             complement(<1..228)
                     /gene="mobB"
                     /locus_tag="QF359_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HJO87853.1"
                     /translation="MKIFGLAGWSGSGKTTLIVKLIPEFVSRGLTVSTMKHAHHKFDI
                     DVPGKDSYEHRQAGASEVMISASQRWALMHEV"
     gene            complement(231..866)
                     /gene="pgsA"
                     /locus_tag="QF359_12905"
     CDS             complement(231..866)
                     /gene="pgsA"
                     /locus_tag="QF359_12905"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HJO87854.1"
                     /translation="MLTNIPNLLTLSRIASIPLLVATFYLESPLGNWLGLAILTFAGI
                     TDFFDGYLARAMKQQSALGKFLDPIADKLLVSSLILMLVAFDLIPGVAILPAVVILCR
                     ELLVSGLREFLAGVQVSVPVSRLAQYKTTLQMLMLGFLIVGPAGPMFGPLTTTDVGVI
                     GLWIAALMTLITGYDYLRAGLHHVDEMDSQQIEAAEKAEPVTDIKENQPAA"
     gene            complement(900..>2305)
                     /gene="uvrC"
                     /locus_tag="QF359_12910"
     CDS             complement(900..>2305)
                     /gene="uvrC"
                     /locus_tag="QF359_12910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HJO87855.1"
                     /translation="SCTDSVFASRTRPCLLYQIKRCAAPCVDIMDQPEYLGLVDQARA
                     FLTGKSVAIQKQMAADMQSASDAQEYEKAAEIRDRIHAMTSIQAHQDIHAAQVDEADI
                     IGLYQAGSQTCIQVFFLRASCNYGHRAYYPSHPSDADTDQILEAFIGQFYANKVPPKL
                     LLLSETVPEKMVLTQALSNRAERKVRVEVPSRGEKKNLIGLALENARKALGRRMAESA
                     SQRKLLDALVEPFQLEAPPERIEVYDNSHTGGTSAVGGMIVSGPEGFIKNAYRKFNIH
                     TVLLDAAAGEAQAGDDYAMMREVLTRRFSRALKEDPDRQDGQWPDFIIIDGGAGHLGV
                     ALEVFEELGISDVGVAAIAKGPDRNAGRERLFLPDKKPFSLDSRDPVLYFLQRLRDEA
                     HRFAIGTHRARRGKRIERSPLDEIQGVGGMRKKALLHHFGSARAVAGAGLTDLESVDG
                     ISRAMAVKIYDWFHPEE"
BASE COUNT          588 a          620 c          563 g          534 t
ORIGIN      
        1 gacttcatgc atgagcgccc atctttgaga ggcggaaatc atgacctcgc tggcgccggc
       61 ttggcgatgt tcataggaat ctttgcccgg cacatcgata tcaaacttat gatgagcgtg
      121 cttcattgtt gataccgtca agccgcggct gacgaattcc gggataagct tgacgatcag
      181 tgttgtcttg ccactgccac tccatccggc gagaccaaaa atcttcatag tcatgccgcc
      241 ggttgattct ctttaatgtc ggttacgggt tcagcctttt cagctgcttc gatttgctga
      301 ctatccattt cgtcaacatg gtgcagtccg gcacggagat aatcataacc agtgatcaaa
      361 gtcattaacg ccgcaatcca caggccaatc acgccaacgt cagttgtggt caaaggccca
      421 aacatcgggc ctgccggacc gacgatcaaa aacccgagca tcagcatttg cagggtagtt
      481 ttatattgcg cgagacggct taccggcaca ctgacctgaa ctccggcaag aaattcccgt
      541 aatcccgaga ccagtaattc gcggcacaat atgaccacag ctggcagaat agcgaccccg
      601 ggaatgaggt caaaagcaac gagcatcaaa atcagtgacg acaccaataa tttatcggca
      661 atcggatcga gaaactttcc taaagccgac tgttgcttca tggcacgggc taaataaccg
      721 tcaaaaaaat cggtaattcc ggcaaacgtt aaaatcgcca agccaagcca attgccgagt
      781 ggcgactcca gataaaacgt cgcgaccaat aacggaatag acgcgatgcg tgagagcgtc
      841 agaaggttgg gaatatttgt tagcatcgcg ggttacctaa acatcctact acttgttggt
      901 tattcctcgg gatggaacca atcataaatt ttaacagcca ttgcccgact gataccatca
      961 actgattcaa gatctgtcaa tccagccccg gcaacagcac gggctgagcc aaagtgatgt
     1021 aataacgcct ttttccgcat tccgccaaca ccttgaattt cgtccaaagg agaccgctct
     1081 atccgtttac cacggcgcgc ccggtgggtg ccaatcgcaa agcggtgagc ttcatccctc
     1141 agccgttgaa gaaagtacag gacaggatcg cggctgtcca agctaaaggg ctttttgtca
     1201 ggtaaaaaca accgctcccg gccggcgttc cggtcaggcc ccttggcgat agcagcgaca
     1261 ccaacatcac taatgccaag ctcttcaaag acttcgagtg ccacgccaag gtgcccggcg
     1321 ccgccgtcaa ttatgataaa gtccggccat tggccatcct ggcgatctgg atcttcttta
     1381 agggcgcggg aaaatcggcg ggtcaggact tcccgcatca ttgcgtaatc gtcaccggcc
     1441 tgcgcttctc cagctgcggc atccagcaag acggtgtgaa tattaaattt gcgataggca
     1501 tttttgataa atccttccgg accggaaacg atcatgccac caactgcact ggtgccaccg
     1561 gtatggctat tgtcgtaaac ttcaattcgc tccggcgggg cttccaattg aaaaggctca
     1621 accagcgcat ctaaaagttt tcgctgcgag gcactttccg ccatgcggcg gccaagtgcc
     1681 ttgcgggcat tctccaacgc caggccaatg agatttttct tctcgccccg gcttggcact
     1741 tcaacccgga ctttgcgttc ggcccgatta ctcaaggctt gggtgagaac catcttttcc
     1801 ggcacggttt cactcaacag cagcagttta ggcggtactt tgttggcata aaactggccg
     1861 ataaaagctt caagaatttg atccgtatcg gcatcagacg gatggctcgg ataataggcg
     1921 cgatggccgt aattacagct ggcgcggaga aaaaatactt ggatacaggt ttgactaccg
     1981 gcttgataca aaccaatgat atccgcctca tcaacttggg cggcatggat atcttgatgt
     2041 gcctgaatag aggtcatagc gtgtattcta tctcggattt ctgccgcttt ttcgtactct
     2101 tgagcatcac tagcggattg catatcagcc gccatctgtt tctgaatagc gaccgatttt
     2161 ccggtcaaaa aggcccgcgc ctgatcgacc agaccgagat actccggttg atccatgata
     2221 tcaacgcaag gtgctgcaca gcgtttgatt tgatagagca aacatggtcg cgtgcgagaa
     2281 gcaaaaaccg agtcggtaca cgagc
//
LOCUS       DASCNL010000990         2037 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002035772, whole genome shotgun sequence.
ACCESSION   DASCNL010000990 DASCNL010000000
VERSION     DASCNL010000990.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002035772"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            65..418
                     /locus_tag="QF359_12915"
                     /pseudo
     CDS             65..418
                     /locus_tag="QF359_12915"
                     /inference="COORDINATES: protein motif:HMM:NF013397.3"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
     gene            598..1470
                     /gene="purU"
                     /locus_tag="QF359_12920"
     CDS             598..1470
                     /gene="purU"
                     /locus_tag="QF359_12920"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008864 - formyltetrahydrofolate
                     deformylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HJO87856.1"
                     /translation="MSFEVVVTPEYVLTMSCPDKAGIVAATTGCLAELNCFITKTAHF
                     ADSETAQFFGRMVFRIDQRGVSVDDVHSAFQMVADRFEMAWHMRNKTNNKRVLIMVSK
                     AEHCLNDLLYRYRIGAIPMEVTAIVSNHPDLKPLADWHDIPYYHLPVSKETKQDQEAD
                     LLKIIEDTDTDLVVLARYMQILTPGFIAKMFPRVINIHHSFLPGFKGAKPYHQAHARG
                     VKIIGATAHFVTEDLDEGPIIWQAVEQVDHTQTPDDLAAVGRDVESQVLARGLRAVLE
                     DRVLLNGHRTIVFR"
     gene            1496..1966
                     /locus_tag="QF359_12925"
     CDS             1496..1966
                     /locus_tag="QF359_12925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014748298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HJO87857.1"
                     /translation="MPKDKNRDRYFEDYTSNDVDILGKIEVDEEEMISFARSYDPQSI
                     HIDGEKAKGGPFNGLIASGWFTGSLMMRFFAQNFLSEISSIASPGLDEVRWQAPVRPG
                     DVLTFRVTTLETRRSQTKPDRGIVKTFTEILNQDGIVVMSTRNVNVILCRNPDS"
BASE COUNT          524 a          480 c          499 g          534 t
ORIGIN      
        1 cctaataatt aatcattatt aggcatataa atacggatac ggttcaactg acacgcagct
       61 tttcgccgtt ggtgtgcttt gtaactggtt ggtctgtctc gccttgtgga tggcagctcg
      121 gactcagaac gacgtggcga aatgtattgt tatcttctga tacctgctcg cctttattgc
      181 cagcgattat gagcattcta tcgccaacat gacgatcttt gtgattgcgc tgcttggtga
      241 acacccggcg acggtgtcgc tggctggaat ggcccataat cttctctgga ttacactcgg
      301 caatgcactt gcgggagcca tgttcatggg taccggttac tggcgggata tgccgcagac
      361 attaactgaa aaaactgcgc cggagactaa gccggtggag gaaagcggca cagcttaatt
      421 cagttatcct gatcatggca tcaaggctca ttatctaaac taataaacct tactacaaaa
      481 aacctctatt gacctgaccg aaagatttgc catgatgccc gccgccgtgg ggtctcggcc
      541 gggtcaacca aaagtggctt ggccccaacc tcaattaggc gcgaaagata ttgacttttg
      601 agctttgagg ttgttgtgac acctgaatat gtattaacca tgagctgtcc ggacaaagct
      661 gggattgttg ccgcgacgac cggttgtctg gccgagctta attgctttat caccaagacg
      721 gcgcattttg ccgatagtga aactgcgcaa ttttttggcc ggatggtgtt ccggatcgac
      781 cagcgcggtg tatcagttga tgatgtgcac tctgcctttc aaatggttgc tgatcgcttt
      841 gaaatggcgt ggcacatgcg caacaaaacc aataacaagc gcgtgctgat catggtgtcc
      901 aaggccgaac attgtctcaa cgatctccta taccgctatc gcattggcgc cataccgatg
      961 gaagtgacag cgatcgtctc aaatcatccg gacttaaaac cactcgccga ttggcatgac
     1021 attccctatt atcacctacc ggtcagcaag gaaaccaagc aagatcaaga agccgatttg
     1081 ttaaagatta ttgaggacac ggatacagat ttggtggtcc ttgcccgcta tatgcaaatt
     1141 ctaacacctg gatttatcgc caaaatgttt ccccgcgtga tcaatattca tcattccttc
     1201 ctgcccggct tcaaaggtgc caagccctac caccaggccc atgcacgggg cgttaaaatc
     1261 attggggcga cggctcattt tgtcactgaa gatttggatg aagggccgat tatttggcaa
     1321 gcagttgagc aggttgacca cactcaaacg ccggatgatc tggctgccgt cggtcgcgat
     1381 gttgaaagtc aggtgctggc acgggggttg cgggcggttc tcgaagatcg ggtactgctt
     1441 aacggccatc gcaccatcgt tttcagataa cagattacaa aatattggat tgagtatgcc
     1501 taaagataaa aaccgcgacc gttattttga agattacacg tctaatgatg ttgatatttt
     1561 agggaaaatt gaagtcgatg aagaagaaat gatcagcttc gctcgatctt acgaccccca
     1621 aagcattcat attgatggtg aaaaagccaa gggtggccca tttaacggtc tcattgccag
     1681 cggctggttt accggcagct tgatgatgcg attttttgct cagaatttcc tatctgaaat
     1741 ttcaagtatt gcctcgccgg gattggatga agtgcgttgg caggcgccgg ttcgccctgg
     1801 agatgttcta acctttcgcg tcacgacatt agaaaccaga cgctcgcaaa ccaaacctga
     1861 ccgcggtatc gtaaaaacct ttaccgaaat tctaaatcag gacgggattg tggttatgag
     1921 cacaagaaac gtaaatgtaa tcctctgccg aaacccagac tcgtaatttt cagagtagaa
     1981 agcatgattt tcgacgacca ttttgcttga gcggacgccg cttatcataa aattctg
//
LOCUS       DASCNL010000991         1555 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002036677, whole genome shotgun sequence.
ACCESSION   DASCNL010000991 DASCNL010000000
VERSION     DASCNL010000991.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002036677"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..491
                     /locus_tag="QF359_12930"
     CDS             <1..491
                     /locus_tag="QF359_12930"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJO87858.1"
                     /translation="QGSTNGVIAPTVVATLSAFFAMLTSICGNELTDRFGRRRMVVIY
                     LMSAGVLALVLGFLAALPYWIVVMLVILYAGLIQLDSAALTAGAVMAAEKGRRGATLG
                     LHALIGFSGGAIGPLVVGMVLDLSGGGESVASWGYAFASMGLVALLGPIALWKLRGSA
                     SA"
     gene            585..662
                     /locus_tag="QF359_12935"
     tRNA            585..662
                     /locus_tag="QF359_12935"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:621..623,aa:Glu,seq:ttc)
     gene            complement(846..>1555)
                     /locus_tag="QF359_12940"
     CDS             complement(846..>1555)
                     /locus_tag="QF359_12940"
                     /inference="COORDINATES: protein motif:HMM:NF012798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HJO87859.1"
                     /translation="QFIDKYAKRETRGWKETSRVFDKYVKPDLGDYRLDAVTTLQIRD
                     LVEAKAETAPYMANRMLAYLRKFFNWASEREMVDASPVSAIKPPGKENARDRILNDGE
                     IRLAWNAFDKMGWPFGHAFTLLLITGQRRDEVTKMRWKDIDEKECLWTLPREATKADR
                     LHEVPLSDLAVEILQSVPRTSNEFVFSTNGKTPISGFSKAKAKADKTAAFLQLQADGQ
                     DRPCNFAEFLTGCIYYI"
BASE COUNT          333 a          380 c          396 g          446 t
ORIGIN      
        1 tgcaaggttc tacaaatggg gtgatcgcgc cgacggtggt agcgaccctc agcgcctttt
       61 tcgctatgct gaccagtatt tgcggcaacg aactcaccga ccgctttggc cgccgccgca
      121 tggtggtgat ttatctcatg tcagccggtg tgttggctct ggtgcttggg tttcttgcgg
      181 cgttgccgta ctggatcgtc gtcatgctgg ttattcttta tgccgggctg atccaattgg
      241 attcggcggc gctcacagcc ggggcggtaa tggcggcaga aaaaggtcga cgtggcgcca
      301 ccctcggtct tcacgcgttg atcggtttta gcggcggtgc cattggcccg ctggtggttg
      361 gcatggtgct cgatctatct ggcggcggtg aaagtgttgc ttcctggggc tatgcctttg
      421 cttcaatggg tctggtggcg cttctggggc cgatcgcctt gtggaaactc agaggctccg
      481 caagcgctta aattacttga tttaaaattt ttcggccgta ggtaataagg gacttgattt
      541 catccaatga ggcgtataaa ccctcgtctc cagtgatgac tagcgacccc ttcgtctagt
      601 caggtctagg acgccagatt ttcattctgg taacacgggt tcgaatcccg taggggtcac
      661 cacttcttta ttaccattaa aaaaccccag aaataagcta aatattcgtg gcttattttt
      721 taaatgtgtg acatttctca atatttgtgt gacgttttgt gttacataaa ttaggggtcc
      781 cattcctagg agattgggct gcagggacag aatcaattac ctccacccag aaaaaccggg
      841 gctgtttaga tataataaat acaacctgtc agaaattcag caaaattaca gggtctatct
      901 tgcccatcgg cctgtaactg gaggaaggct gccgtcttgt ccgccttagc cttggctttg
      961 ctgaaaccac taatcggcgt tttgccgttg gtggaaaata caaattcgtt gctggtacgc
     1021 ggaacgcttt gcagtatttc cacagctaaa tctgatagcg gcacttcgtg caatcggtca
     1081 gctttggtag cctccctagg caaggtccac agacattctt tttcatctat atctttccag
     1141 cgcattttgg tgacttcatc gcggcgttga ccggtaatca gcaatagcgt gaatgcatgg
     1201 ccaaaaggcc atcccatttt atcgaatgca ttccaagcca gcctgatttc tccgtcattt
     1261 agaatacggt cacgggcgtt ttctttgccg ggaggcttga ttgctgaaac cggcgaggca
     1321 tcaaccatct ccctttcact tgcccaattg aaaaatttgc gaagataagc cagcattcgg
     1381 ttcgccatat acggggctgt ttcagctttt gcttcaacca gatctcggat ttgcagggtg
     1441 gtaacggcat ccaaacgata gtcgccaaga tcaggtttca catatttgtc gaacacccgg
     1501 cttgtttctt tccagccacg ggtttcacgc ttcgcatatt tatcgatgaa ctggt
//
LOCUS       DASCNL010000992         2810 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002037628, whole genome shotgun sequence.
ACCESSION   DASCNL010000992 DASCNL010000000
VERSION     DASCNL010000992.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002037628"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(70..264)
                     /locus_tag="QF359_12945"
     CDS             complement(70..264)
                     /locus_tag="QF359_12945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87860.1"
                     /translation="MKKGLFITLIVAVALMSTAAFSQTVGVGTTKGGFANQAGQSLSK
                     VVSQKTGIQMRSQPFGSSIV"
     gene            511..2238
                     /locus_tag="QF359_12950"
     CDS             511..2238
                     /locus_tag="QF359_12950"
                     /inference="COORDINATES: protein motif:HMM:NF006203.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HJO87861.1"
                     /translation="MVKVVDADADQKSVAEVFLVALMDNGIEYVFANGGTDFAPIIEA
                     LVSATQAGEKTPKFITVPHENVAMAMAEGYFRLAGKPAGVMVHVTVGTANTICGVMNA
                     SRDNVPVLVMAGRTPLTESGDIGSRNIGIHWGQENFDQGGMLREYVKWDYELRKGQPV
                     ETLIGRALDIAMSEPCGPVYLTLPREVLGYTVGEERKLPRERALGNATTIPSTVVIEQ
                     AAVMIGAAEKPLIITGKVGARPGAAETLSVLAEKYALPIVQVGGPSLLSEHPMNLGFA
                     VGKFLPDADLVLVVESAVPWIPRNVEPDAAAKLIHLSPDPHYAGFPYRGFEMDLAISG
                     EPVQSLELISEVLASHIDPNSATIKSRAVEITAIHDQLAADKQKIMADAAGHTPILAP
                     WVAACLNKIKADDSIIISELGVNIDHVDYKVPSSIVSGGQAGGLGHGLGSALGAKLAA
                     PDRDVILLVGDGSYMFGAPTPAHFVAKAQNLPTLTIVMNNSQWFAVNRATRVMYPDGK
                     ADKANEMPLVDLTPSPNYEMIMEACGGYGEQVEDPDKLEDAMRRGLKKVRAGTPVLLN
                     VITTPGGRD"
     gene            2251..2706
                     /locus_tag="QF359_12955"
     CDS             2251..2706
                     /locus_tag="QF359_12955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87862.1"
                     /translation="MNEDTLPAHFPKHFDGAPVNSEGLVPNALPLEFTNGTCTYRIDA
                     EQVHILNKLDDEHGGMQWSEPLSAYAGISHWVIAERTQEKLGFFTKLLSGKNEPAVND
                     GPRHAVSALTHKQEAWMSVMLYSCALADGEEGEAAEKIAQKYRQLFSFG"
BASE COUNT          695 a          656 c          775 g          684 t
ORIGIN      
        1 gaccgtatag agtgattcca gctcattctc caaaccaaat tccaatttgc cggcattgaa
       61 cgatggcact tagacgatgg agctaccaaa gggctgtgac cgcatctgga taccggtttt
      121 ttgggaaacc actttagaaa gtgactgccc agcttggttg gcaaagccgc ctttggttgt
      181 accgacgcct acggtttgtg aaaaagccgc agtagacata agtgcgaccg ctacaatcag
      241 ggtaataaat aagccttttt tcattttaac tctcccatgg ataggtattt taattaatac
      301 tttggaaaag ccgcatagtc tcactattaa tgtagctata ttagacattt agaaaaaggc
      361 caatttgacc caaaggttag aaatcatagt aaattatatc aatcggattt aaataattgc
      421 accatacgtt aagagcactg gacgatcagg cttttccagt taaaatccat aaaatttact
      481 aatctggaat attagatggg gaataccgga atggttaaag ttgtagatgc cgatgctgat
      541 caaaagtctg tggcagaggt atttttagtc gccctgatgg ataacggcat tgagtatgtc
      601 ttcgccaatg gcggcactga tttcgcgccg atcatcgaag ctttggtgtc ggcgacacaa
      661 gccggagaga aaacacctaa attcattacc gtgccgcatg aaaatgtcgc aatggcgatg
      721 gcggaagggt atttccggct tgccggcaaa cctgccgggg tgatggttca cgttacggtc
      781 ggcacggcta atactatctg cggcgtgatg aatgcgtccc gggacaatgt gccggtcctg
      841 gtgatggcgg gacgcacacc tctgaccgag agtggcgaca ttggttcccg caatattggt
      901 attcactggg ggcaggagaa ttttgatcag ggcggcatgc tgcgtgaata tgttaaatgg
      961 gattatgaac tgcgtaaggg gcagccggtc gaaactctta tcggccgggc tctcgatatc
     1021 gccatgtccg agccttgcgg gccggtctat ctgaccctgc cgcgggaagt tttagggtat
     1081 acagttggtg aggaaagaaa actgccgcgg gaacgtgctc tcggtaatgc gacgaccata
     1141 ccttcaaccg tggtcatcga gcaggctgcc gtgatgattg gggctgccga aaagccactg
     1201 attataaccg gaaaagtcgg tgcccgtccg ggtgcggccg aaaccctcag cgttttagct
     1261 gagaaatatg ccctgcctat cgtacaagtt ggcggtccca gcctgctcag cgaacatccg
     1321 atgaatttgg gctttgccgt cggtaaattc ctgcctgatg cggatttggt gctggttgtc
     1381 gaaagtgcgg taccgtggat accgagaaat gttgagcctg atgcggcggc aaaactcatt
     1441 catttgtcac cggatccgca ctatgctggt ttcccctatc gtggctttga aatggacctc
     1501 gcgatttccg gcgaaccggt gcagagcctg gaactgatta gtgaagtctt ggcttcgcac
     1561 attgacccga attctgctac cattaagtct cgcgctgttg aaattaccgc tatccatgat
     1621 caactagccg ctgataaaca aaaaattatg gcggatgcag ctggtcatac accgattctg
     1681 gcaccttggg tggcggcgtg tctgaacaag ataaaagctg atgactccat tattatcagc
     1741 gaactgggcg tcaatatcga tcatgttgat tacaaagtgc cgtcgagcat cgtcagcggt
     1801 ggacaggcgg gtggattggg ccacgggctg ggctcggctt tgggggcgaa actggccgcc
     1861 ccagaccgtg atgttatttt actggtgggc gacggctcgt atatgtttgg cgcccccaca
     1921 ccggcgcatt ttgtcgccaa ggcgcagaac ctgccgacac tgaccattgt catgaataat
     1981 tcgcaatggt ttgccgtcaa ccgggcaacc cgggtgatgt atccggatgg caaagccgac
     2041 aaggccaacg aaatgccgtt ggtcgatctg acgccaagcc ccaattatga gatgattatg
     2101 gaagcttgcg gcggctatgg cgagcaggtc gaagatccgg acaaattaga ggatgcgatg
     2161 cgccgggggc tgaagaaagt ccgcgccggc acgccggtat tgctcaatgt tattaccaca
     2221 ccgggcgggc gagattagca ctgatctgtt atgaacgaag atactttgcc tgcgcatttt
     2281 ccaaaacact ttgacggggc gccagtgaac tcggaagggt tggtacctaa tgctctgcct
     2341 ttggaattca ccaacggtac ttgcacgtat cggatcgatg cagagcaagt tcacattctc
     2401 aacaaattgg atgacgagca tggggggatg cagtggtcag agcctttatc agcttatgcc
     2461 ggtatcagcc actgggtgat cgctgagcgc acccaagaga aattgggttt tttcaccaaa
     2521 ttacttagtg gcaaaaatga gcctgcggtc aatgacggtc cgcgccacgc tgtaagcgcc
     2581 ctcacgcaca agcaagaggc ctggatgtcg gtcatgctct atagctgtgc gttggctgac
     2641 ggtgaagagg gtgaagcggc agaaaaaatt gcccagaaat atcgccagct gttttccttt
     2701 ggctaatgga taatttctca acagttgagt aattaataca ttttcacaat tgtaacagcc
     2761 tagctgatcg ccgcgccgga gggctgtgcc agcggtaaac cagtttccgg
//
LOCUS       DASCNL010000993         1158 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002037804, whole genome shotgun sequence.
ACCESSION   DASCNL010000993 DASCNL010000000
VERSION     DASCNL010000993.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002037804"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1145)
                     /locus_tag="QF359_12960"
     CDS             complement(<1..1145)
                     /locus_tag="QF359_12960"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJO87863.1"
                     /translation="MKNINITFNSNIDAYESGPHIATVTVDLLGTEERTLNVDQVLNR
                     WRHETGKLTDVIALKYTEPMLGPVGRAIDIRLKGEDLNQLKAAAIEMKNWLGAYRGVI
                     DLSDDLRPGKPEIQLRLRAGATALGLNAQMIASQLRSALFGKTASEIQVGKESYEIDV
                     RLAKDDKNSLSDLEYFSVTAPDGGQIPLDSVAILESGRGYARIHRIDRKRTVSLQGNV
                     DTNLGNIGEILTDMTNSYLPKFAKKYPSIKVSYHGEVNEGAKTRGSIFSGFGLGLIGV
                     YLLLSFLFRSYIEPFIVMVAIPMGLIGVIWGHYLIGLDMTMPSIVGFASLAGIVVNNA
                     ILMMEFIRIQRRAGDTAAEAARHASRMRFRAILLTSTTTIMGLLPLLT"
BASE COUNT          288 a          301 c          288 g          281 t
ORIGIN      
        1 gtcaatagcg gcagcagccc cataatcgtt gtagtcgaag tcaaaagaat ggctctaaac
       61 cgcatccggg aggcatgacg cgcggcttca gcggcagtgt cgccggcacg ccgctggatg
      121 cgaataaact ccatcatcag aatggcattg ttgacgacga tgccggctag tgaagcaaac
      181 ccaacaatgc ttggcatggt catgtcaagg ccgatcagat agtgacccca gatcacgccg
      241 atcagcccca tcgggatggc caccataaca atgaatggct cgatataact gcgaaaaaga
      301 aaactcaaca gcaggtacac gccaatcaat ccgagaccaa agccactaaa tattgaaccc
      361 cgcgtcttgg ctccttcgtt aacctcaccg tgataggaaa ccttaattga gggatacttt
      421 ttagcaaatt tcggcagata actatttgtc atatcggtga gtatttcgcc gatatttccg
      481 aggttggtgt cgacattacc ctgcaggctc actgtccgtt tgcggtcgat acggtgaatg
      541 cgggcatagc cgcggccgct ttcaaggatg gcaactgaat ccaatgggat ttgaccaccg
      601 tctggagcag tgacgctgaa gtattcgaga tcgctcaggc tgtttttgtc atcctttgcc
      661 aggcgtacat cgatttcata agactccttg ccaacttgaa tttcactggc tgttttgcca
      721 aacaaagccg atcgtagttg tgaggcgatc atctgcgcat tgaggcctag cgccgtcgca
      781 ccagcgcgga gccgtagctg aatttccggt ttgccaggtc tcagatcatc cgaaagatca
      841 atcacgcctc gataggcacc gagccaattt ttcatctcga tcgccgccgc ctttaattga
      901 ttgaggtctt cgcctttgag ccggatatca atcgcacggc ccacgggtcc cagcatgggc
      961 tcggtatatt ttagcgcaat gacatcggta agcttgccag tttcatgccg ccaacggtta
     1021 agcacttgat cgacatttaa agttcgttcc tcggtgccaa gcaaatccac ggtaacggtc
     1081 gcgatatggg ggccggattc ataagcatca atattactgt tgaaggtgat attgatgttt
     1141 ttcaccagag cttggcca
//
LOCUS       DASCNL010000994         1367 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002038865, whole genome shotgun sequence.
ACCESSION   DASCNL010000994 DASCNL010000000
VERSION     DASCNL010000994.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1367)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1367)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1367
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002038865"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="QF359_12965"
     CDS             complement(<1..658)
                     /locus_tag="QF359_12965"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87864.1"
                     /translation="MTEKLGYIGLGIMGGPMVDRLLDAGHDVTVWNRSREKILPALDK
                     GAIEATSVGNLVTNVDIVLMCLTDAKAVEIVVFGDGGVASAGSKDKLLVDFSSMRPDL
                     TRNFSVRLKAETGMGWVDTPVSGGAKGAAEGTLAIMAGGEATDIERVRPIVAAFSQRF
                     THMGDSGAGQVTKLCNQIIVASGVATLAEAISFAEKSGAVDTTKLAEALTGGWADSQP
                     F"
     gene            complement(655..>1367)
                     /locus_tag="QF359_12970"
     CDS             complement(655..>1367)
                     /locus_tag="QF359_12970"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HJO87865.1"
                     /translation="LHGECLTVDGLTLTEALADAPKPDGQVFLPKEEAFSETGGVVVI
                     KGNLCPDGALLKVAGLKSLVHEGSALVFESEEDCMAVIRGRSYDEGSVIVIRNEGPKG
                     GPGMREMLGVTAIIYGQGMGEKVALLTDGRFSGATRGMCIGYASPEAASGGPIGLIET
                     GDIIRIDGGERSIDVKISDEEMNERRKKWTPPDASKLAGALQKYAATVGPANLGAVTH
                     AGNVQWDVEEPIDSGDIS"
BASE COUNT          317 a          417 c          326 g          307 t
ORIGIN      
        1 gaaacggttg cgaatcagcc cagccgccgg tgagcgcttc ggccaatttt gtcgtatcta
       61 cggcgccaga tttttcggca aagctaatag cttcagcaag ggtagcgacg ccactggcga
      121 caatgatctg attacagagt ttagtcactt gcccggctcc actatcgccc atatgggtaa
      181 agcgctgaga aaacgccgca acaatggggc gaacacgctc gatatctgta gcttcgccac
      241 cggccattat cgccagcgtg ccttccgcgg ctcccttagc cccacctgaa accggtgtat
      301 caacccagcc cataccggtt tctgctttta atcgcaccga aaaatttcgc gtcaagtcag
      361 ggcgcatgct ggaaaaatcg accagtagct tgtctttaga gccggcgctc gccacaccgc
      421 cgtcgccaaa aaccacaatc tcaacggctt tggcatcggt aaggcacatc aggacaatat
      481 cgacattggt aacaagattt ccaacgctgg tggcttctat cgcaccttta tccaaggcgg
      541 gcaggatttt ctcgcggctg cgattccata ccgtgacgtc atggcctgca tcgagcaatc
      601 ggtccaccat cggcccaccc ataataccaa gcccgatata acctaatttc tctgtcatga
      661 tatatccccc gaatcaatcg gctcctcgac gtcccattgt acgttgccgg catgagtgac
      721 ggcgcccaga ttggcgggtc caacggttgc agcatatttc tgcaaggcac cggcgagctt
      781 tgaggcatcg ggcggggtcc atttttttcg tcgctcgttc atttcttcat cggaaatttt
      841 aacatcaatg ctccgctcgc cgccatcaat acgaataata tcaccggtct caataagccc
      901 aatggggcca ccagatgcag cttcgggtga agcatagcca atacacatac cgcgagtcgc
      961 gccggaaaac cggccgtcgg tcaaaagggc cactttttcg cccatgccct ggccgtagat
     1021 aatggcggtg accccgagca tttcccgcat gcccggtccg cctttcgggc cttcattgcg
     1081 gatgacgatt actgagcctt catcgtaaga ccggccccgg atcaccgcca tgcagtcttc
     1141 ttcactctcg aacacaaggg ccgagccttc atgaacaagc gatttaagcc cggcaacttt
     1201 cagcaatgcg ccatctggac agagatttcc cttgatcacg acaacaccac cggtttctga
     1261 aaacgcctct tctttgggca ggaacacttg accgtccggt ttgggtgcat cagccagggc
     1321 ttcggtcaag gtcaaaccat caacggttaa acattcgccg tgcaaat
//
LOCUS       DASCNL010000995         5996 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002046968, whole genome shotgun sequence.
ACCESSION   DASCNL010000995 DASCNL010000000
VERSION     DASCNL010000995.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5996)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5996)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5996
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002046968"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            244..1227
                     /gene="selD"
                     /locus_tag="QF359_12975"
                     /pseudo
     CDS             244..1227
                     /gene="selD"
                     /locus_tag="QF359_12975"
                     /inference="COORDINATES: protein motif:HMM:NF002098.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
     gene            1290..1817
                     /locus_tag="QF359_12980"
     CDS             1290..1817
                     /locus_tag="QF359_12980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HJO87866.1"
                     /translation="MATRLSPLNVAAFLSRPLSVLPLAPLQPLLDVALMVMRRQHPAV
                     FERLDELGDPLFVIDPIDLPFIFAMRPAGARPSLFACREVNTDTATAIIRGSLPMLID
                     LLEGRLDGDALFFSRELTVEGDTEAVLVLRNAVDSDEIDLFEDFLAILGLLAGPLRFA
                     AEFKNAVTTDWNAAR"
     gene            1814..2818
                     /locus_tag="QF359_12985"
     CDS             1814..2818
                     /locus_tag="QF359_12985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U32 family protein"
                     /protein_id="HJO87867.1"
                     /translation="MNKSLATKKLELVCPAGTPASLRAAVDAGADTVYLGFRDETNAR
                     NFPGLNFSRKELADGVAYAHDHNAKVLVAINTFPKAGNPESWHDAVRDAEAVDADAVI
                     LADIGLLAYTAEHHPELRRHLSVQASASNTEAIRFYAREFDVKRVVLPRVLTVEEIAA
                     LNADVPVETEVFVFGGLCVMAEGRCSLSSYVTGQSPNMNGVCSPASHVHYEEIDGQLV
                     SKLGDFTINSFGEDEAAGYPTLCKGRFSVEGSVSYLFEDPTSLNAITMLDALMKAGVT
                     ALKIEGRQRGRAYVTQVVSAFRKAVDAASRGEALPDLDMSLLTEGGQETTGAYQKTWR
                     "
     gene            2793..3725
                     /locus_tag="QF359_12990"
     CDS             2793..3725
                     /locus_tag="QF359_12990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HJO87868.1"
                     /translation="MPTKRRGGKGEIMTAKLTLGPVLFNWSAERWRDFYFEITDEAPV
                     EVVYLGEVVCSKRLPFYAEHILEVAERLTAAGKEVVFSSLALVMNNRELEGVSELAEQ
                     ADSLVEANDLSAISYLSGEPHIVGPYISTYNEGTANFFAERGAKRIVLPPELAARTIG
                     ELAKTGIDLEGQVFGRLPLAISARCYHARSRNLHKDNCQFVCGEDLDGMKLTTVDGKD
                     FLAVNGTQTLSHNYCNLAGELSTLRELGVSHFRLSPQAIDMVAVAECFRALLDDKFDA
                     REATAQLSDLVDDVPFADGFFHDQAGVDWTPAEL"
     gene            3737..4936
                     /locus_tag="QF359_12995"
     CDS             3737..4936
                     /locus_tag="QF359_12995"
                     /inference="COORDINATES: protein motif:HMM:TIGR03942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0018209 - peptidyl-serine modification
                     [Evidence IEA];
                     GO_process: GO:0046500 - S-adenosylmethionine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HJO87869.1"
                     /translation="MRVDPFHIMAKPIGPECNLDCSYCYYTEKAALYPPRTQFRMTDA
                     VLETYIKDYIAASALPEIMFFWQGGEPTLLGLDFFESVVELQNKYKLENQTVTNSLQT
                     NGTLIDDSWVGFLAENNFLVGISIDGPARLHDRFRVGKKDEKTFVKVEQAIKILQAGG
                     VEYNTLTTVQRRNFRFGAEVYRYLRDLGVEYMQFIPIVERRRPDGELAGPPDLEAQNK
                     KTKITEWSVPQDGYGDFICAVFDVWRKSDVGKVFVQPFDVHLGLRMGEPSTLCINARS
                     CGKGLAMEHNGDLYACDHYVYSTHRLGNVMETPMQELVADVRQLKFGEDKHKKLPSEC
                     VACRFLTYCGGGCPKHRFMPSKSDGFDLNYFCPSYTKIAEYIEPAMAEMATLLRQGQP
                     PARIMEK"
     gene            4983..5186
                     /locus_tag="QF359_13000"
     CDS             4983..5186
                     /locus_tag="QF359_13000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87870.1"
                     /translation="MTVTTVIATIIVVIVVVATAHAEAGRFDDTIKTQQRTIDRTKSE
                     KWDGILFGQRSLLNMLSYHLNLF"
     gene            complement(5370..>5996)
                     /gene="cbiB"
                     /locus_tag="QF359_13005"
     CDS             complement(5370..>5996)
                     /gene="cbiB"
                     /locus_tag="QF359_13005"
                     /inference="COORDINATES: protein motif:HMM:NF015164.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016880 - acid-ammonia (or amide) ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-phosphate synthase CbiB"
                     /protein_id="HJO87871.1"
                     /translation="KIVEAREVASQIVGRDTEFLDRHGVARAAIESLSENFSDGVLAP
                     IFWTALFGLPGALAYKALNTADSMIGHRNERYLHFGWTAARLDDVANFIPARIAALIL
                     CLTAFVWGRNEARRSWLAIRHDAKKQISVNAGYPEAAMAGALNIRLAGPREYDEEPVD
                     GEWIGSANEGSTADATHEDISKGLLLYVNACLLSASVIVFLTVWLAQG"
BASE COUNT         1367 a         1490 c         1624 g         1515 t
ORIGIN      
        1 atgccgatcc tcatgtctgc tggcaaaatc aatcttattt ccgtgccaaa ggcaaagtat
       61 gaatcacccg ccaaagacta agaatcaaaa ggtgcccgaa ttctctattt tgtgattggt
      121 taccccccct ttgacccgct ataaggttat ccagaactat aactaactaa aggaaatctg
      181 gacatggatg gcgattttcg cttgacccag ttgtctcacg gcggcggttg aggttgtaaa
      241 gtagcaccgt cggtgcttga cggcatactt tctaaattac cgcccgctac caagtatcca
      301 aacttgctgg taggcgttga aaccggtgac gattcggctg tttataaaat taatgatgaa
      361 caagccgtgg tcgcaacgac cgatttcttt atgccgattg tcgatgatct cttcgatttt
      421 ggccgaattt ctgcgaccaa tgcgctctcg gatatctatg cgattggtgg ccagccaatc
      481 atggcactgg cgattgccgg ttttccagtc aattcaatat cagatgaaga tatatccaaa
      541 gttttagccg gtggcgctgc ggtttgtgaa gcggcaggcg tgccggttgc cggtggccac
      601 acgattgacg ctaaagaacc gatttatggt ttggcggtta atggcttgat ccatcccgac
      661 aaaattaaac gtaattcaga tggccaggcg ggcgatgtgc tgatacttgg caaaggtctc
      721 ggcgtcggta ttttgggcgc cgccatgaac aaagatgagc ttgatcctaa gggctataaa
      781 atcatgattg aaagcacaac ccaactcaat tctgtcggcg tagaattggc tgccttgacc
      841 gaaatcaatg cattaaccga cgtaaccggc tttggtctgt gtggtcacgt atttgagctc
      901 tgtaaaggag ctggtctgtc agccaaactt gtctgggacc aattgccgat gctggatact
      961 gtgctcgact atgcacagca gggttacaat actggcgcgg ctggtcgcaa ttgggacagt
     1021 ttcgccgatc aggttgttgt tccagacggc atggcacaat ggcagaagaa cctgttgatg
     1081 gacccgcaaa ccagtggcgg tctgttggct tcgtgtccgc cggaagcggc tgagaaagtt
     1141 ctcaaaacct tccatgatgc tggctttgac tatgcctgca ttatcggcga acttggcgaa
     1201 ggtgagccca aaatgactgt gacatagtgt attagtccac cgtctgccct tttgatcctt
     1261 gctgatctgg tcagccgggg ggaggggaaa tggctactcg attatcaccg cttaatgttg
     1321 ctgccttttt aagccggccc ctgtcagttt tgccgttggc gcctctccaa cctctactag
     1381 acgtcgcact gatggttatg cgccgtcaac acccggctgt ctttgaacgt ctcgacgaac
     1441 tcggcgaccc gcttttcgtt attgatccga tagatctgcc atttattttc gccatgcgtc
     1501 ctgcgggtgc ccgtccctca ctattcgcgt gccgggaagt gaatacagac accgcgacag
     1561 caattattcg tggctcgctg ccgatgttga ttgatttgct ggaagggcgg ctcgatggtg
     1621 atgcgttgtt tttctcgcgt gaattaacgg ttgaaggtga taccgaagcg gttttggtat
     1681 tacgcaatgc ggtcgacagc gacgagatcg acttgtttga agatttcctt gctatattag
     1741 ggctccttgc tgggccgttg cgttttgccg ctgagttcaa aaatgcggta accaccgact
     1801 ggaatgcggc ccgatgaaca aatcccttgc caccaagaag ttagaacttg tttgcccggc
     1861 tggcacgcct gcttccttgc gggccgccgt cgatgctggg gctgatactg tttatctggg
     1921 ttttagagac gagaccaatg cacgcaattt tccaggcctt aatttcagcc gcaaagaatt
     1981 ggctgatggc gtcgcttatg cccacgacca taacgccaaa gtgttggtgg cgattaacac
     2041 atttcccaaa gcaggtaatc cagaatcctg gcatgacgct gtccgggatg ccgaagccgt
     2101 ggacgcagat gcggttattc tcgccgatat cggcttgctg gcctatacag ctgagcatca
     2161 tcccgagctg cgccggcatt tatccgtaca ggcatcggct tccaacaccg aagcgatccg
     2221 cttttatgcc cgtgagtttg atgttaagcg cgttgtgctg ccgcgagtgc tgactgtcga
     2281 ggaaatagct gccctcaacg ctgacgttcc ggttgagacc gaagtgtttg tttttggcgg
     2341 gctctgcgtg atggctgaag ggcgttgctc gttgtcatct tatgtcaccg gtcaatcgcc
     2401 caatatgaac ggcgtctgtt caccagccag ccatgtgcat tatgaagaaa ttgacggcca
     2461 gctggtctct aaactcggtg attttaccat caattccttc ggcgaagacg aggcggcagg
     2521 ttacccgacg ctctgcaaag gccgcttttc ggttgaaggc agcgtctcct atttgtttga
     2581 agacccaact tctctcaacg ccattaccat gctggatgcc ttgatgaaag cgggggtcac
     2641 agcgctcaaa attgaaggcc gccaacgggg ccgtgcctat gtcacgcaag ttgtcagcgc
     2701 ctttcgcaag gcggttgatg ccgcttcccg aggtgaagcg ctgcctgatc tcgatatgag
     2761 tcttctcacc gaaggcggcc aggagactac gggtgcctac caaaagacgt ggcggtaagg
     2821 gagagattat gacagcaaaa ctcactctcg gtccggttct gtttaattgg tcagctgaac
     2881 gctggcggga tttctatttt gaaatcaccg atgaagcacc ggtagaggtg gtctatctcg
     2941 gcgaggtggt ctgctccaaa cggcttccgt tttatgccga gcatattcta gaagtggccg
     3001 aacgattgac cgctgctggt aaagaagtgg tcttctccag cctcgctttg gttatgaata
     3061 atcgggagct ggaaggggta agtgagcttg ccgagcaagc cgacagtttg gtggaagcca
     3121 atgacctatc tgcgatctcg tatcttagtg gtgagccgca tatcgtcggt ccttatatca
     3181 gcacctataa tgaaggcact gctaactttt ttgctgaacg gggcgccaag cgcattgtcc
     3241 tgccgccgga gctcgctgca aggacaatcg gtgagctggc aaaaactggc atcgatctgg
     3301 aaggtcaggt tttcggccgg ctaccgctgg cgatatcggc acgctgctat cacgccagat
     3361 cacgaaatct ccataaagat aattgccaat tcgtctgcgg tgaagacttg gacggcatga
     3421 aattaacaac cgtcgacggt aaagattttc tggctgtcaa cggaacgcaa accctatcgc
     3481 ataattattg caatttggcg ggcgaactct caaccctgcg tgagcttggt gtgagccatt
     3541 ttcggctatc accccaggcg attgatatgg tggcagtggc cgaatgtttt agggcgcttc
     3601 ttgatgacaa atttgacgcc agagaggcaa ctgcccagct ttcggatttg gtcgatgacg
     3661 tcccctttgc cgacggcttt ttccatgatc aggctggtgt tgactggaca ccggctgagc
     3721 tttgagtgaa gcgtccatgc gtgttgaccc ttttcacatc atggccaagc ccattggccc
     3781 ggagtgtaat ctcgattgtt cgtattgtta ttacactgag aaggccgcgc tgtacccgcc
     3841 gcgcacgcaa tttcgtatga ccgacgcggt gctggagact tacatcaaag actatattgc
     3901 cgcgagtgcg ttgccggaga ttatgttctt ttggcaaggt ggtgagccaa ccctgcttgg
     3961 gctagatttt tttgagagcg ttgttgaact gcaaaataaa tacaagctcg aaaaccagac
     4021 cgtcaccaac tctctgcaaa ccaatggcac gctcattgac gattcctggg tcggcttttt
     4081 agctgaaaac aattttttag ttggcattag catcgatggt ccggcgcgac tgcatgatcg
     4141 ttttcgggtc ggtaaaaagg atgagaagac ttttgtcaaa gtcgagcaag ccatcaaaat
     4201 actgcaggcg ggcggcgttg aatataatac gctaaccacg gtgcagcgcc gcaacttccg
     4261 ctttggcgca gaggtctatc gttatttgcg cgacctcggt gtggagtaca tgcagtttat
     4321 cccgattgtt gagcgccgcc gccctgacgg tgaactggcg ggaccacctg acttagaagc
     4381 tcaaaacaaa aaaacgaaaa ttaccgagtg gagtgtgcca caagatggct atggcgattt
     4441 tatctgtgcg gtgtttgacg tttggcgtaa aagcgatgtc ggcaaggttt ttgtgcagcc
     4501 gtttgatgtc catctcggcc tcagaatggg tgagccttca accctttgca tcaatgccag
     4561 gtcttgcggc aaaggcttgg cgatggagca caatggcgat ctctatgcct gtgatcacta
     4621 tgtctattca acccaccgac tcggtaatgt catggagacg ccgatgcagg aactcgtcgc
     4681 tgatgtccgg caattaaagt tcggagaaga taaacacaaa aaattaccga gcgaatgtgt
     4741 ggcgtgtcgg ttcctgacct attgcggggg cggctgtccc aagcaccggt ttatgccatc
     4801 aaaaagcgac ggcttcgatt tgaattattt ctgtccgtcc tacaccaaga tcgccgaata
     4861 tatcgaacca gccatggctg aaatggccac tctgctgcgc caaggacagc caccggcaag
     4921 aattatggag aaataagagg cggtgctcca aagagttggt tgcggctgca ccaaccctgt
     4981 taatgaccgt taccaccgtc atcgccacca tcatcgtggt catcgtggtg gtcgccaccg
     5041 cccacgctga agccggtcgg tttgatgaca ccataaagac tcaacaaaga accatcgacc
     5101 gaactaagtc tgaaaaatgg gacggtattc tatttggcca gcgtagtctt ctgaacatgt
     5161 tgtcttatca cttgaatctt ttctgagctg gtaaaccgat tcggggcggc gtttattaat
     5221 agggagggac attgatttta gctgccggac tcgaaatgtc tcgtttgggt tagaaccaga
     5281 ctctttgaga acccgcctta atggctgtat ttggagacaa aaaggacatt tttaggtgat
     5341 actggaacca tcagtttttt cctgacgcgt caaccctgcg ccagccagac agtgagaaag
     5401 acgattacgc tggctgacag caaacatgca ttaacgtaga gcagcaagcc ttttgagata
     5461 tcctcatggg tcgcgtcggc ggtgcttcct tcattggcac tgccgatcca ctcgccatcg
     5521 accggttctt cgtcatattc acgcggaccg gcgagtcgga tgtttaatgc tccggccatg
     5581 gcggcttcgg gatagccggc attaacggag atttgttttt tggcatcgtg tcgaatggcg
     5641 agccacgagc gccgcgcctc attgcgaccc cagacaaaag cggtgagaca gagaatgagc
     5701 gctgcgatgc gggccggaat gaagttcgcg acatcatcaa gccgggctgc cgtccagccg
     5761 aaatggagat agcgttcatt tctgtggccg atcatgctat cggcggtgtt gagcgcctta
     5821 taagcgagcg cgcccggtaa accgaacagg gctgtccaga agatcggcgc cagcacaccg
     5881 tcggaaaaat tttctgaaag ggattcgata gcggcgcggg cgacaccatg gcggtcgaga
     5941 aattcggtat cccggccaac gatctggctg gctacctcgc gcgcttccac aatttt
//
LOCUS       DASCNL010000996         1343 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002051372, whole genome shotgun sequence.
ACCESSION   DASCNL010000996 DASCNL010000000
VERSION     DASCNL010000996.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002051372"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(378..>1343)
                     /locus_tag="QF359_13010"
     CDS             complement(378..>1343)
                     /locus_tag="QF359_13010"
                     /inference="COORDINATES: protein motif:HMM:NF025598.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HJO87872.1"
                     /translation="VHKVGLEDKLLLPGLADKVGEVTAIEVKDAKKTITVKRDGEKWL
                     MADRQNYVASNEVLNDLLLGLSELRLRETKTKKPKLYPRLQVEDVKGDKAKSILLTVK
                     GKGGDLAKLIVGKVNADVAGPSSTGRYVRKPGDEQSWLASGRLDIPGSINKWVKPEFL
                     NVAGKRIQHVTVNHPDGQQMIVSRAGQDKFKIDNMPADRVVEYQSDIDNMGDGLDKLE
                     LEDVMAKGQKKFPADKTIKTEIKTNDGLIMDVKMIELNNGEEFWAELSARTPEDASDK
                     IKKEAAAINKVVSKWVYQLPAHKYRYMSRKHSDVLKDPKKDKKKK"
BASE COUNT          312 a          346 c          292 g          393 t
ORIGIN      
        1 tgcctaaaag acaactcgaa agagagcttg aaaaggtcaa aacttgataa gaagggccat
       61 ttttcagcta agatagcttg cctagccata gattcctcaa aactttcgtt ggataagcag
      121 tactttagga ccgtattaaa ctgtcattac cgaagaaagt ttccctatta cgtttcattt
      181 cggctatctg ggatcgtaca atgctggacg gcaccggtaa gcccgtcacc ctccccaaca
      241 cattcgcccg tactctttag ggcgtgaacc gccatgcaaa gggccaggca ttgagggcac
      301 tggagggagc cggactaatc gccgttgaaa ggccgcttcg cagagcagcc tttttgaaaa
      361 agtgtacctg gtacgcttta tttcttcttt ttgtctttct taggatcttt cagaacatca
      421 ctgtgtttgc ggctcatata gcggtattta tgcgccggta attggtagac ccatttagaa
      481 acaactttat tgatcgccgc cgcttctttt ttgattttat cgctggcgtc ttcaggtgtg
      541 cgggcggata attcagccca gaactcttca ccgttgttaa gctcaatcat tttgacatcc
      601 atgatcaagc cgtcattggt tttgatctcg gtcttgatgg ttttatctgc agggaacttt
      661 ttctggcctt tagccatgac atcttcgagt tcgagcttat ccaagccgtc acccatattg
      721 tcgatatccg attgatactc aaccactcga tcagcgggca tattatcaat tttaaactta
      781 tcttggccag cccggctgac gatcatctgc tggccatccg gatgattgac ggtgacatgc
      841 tgaatgcgct tgccagctac gttcaagaat tccggtttca cccatttatt gatgctgcca
      901 ggaatatcga gacggccaga agccagccag gattgctcat cacccggttt acgcacatag
      961 cgacccgtac tcgacggtcc ggcaacatca gcgttaacct tgccgacaat cagtttggca
     1021 agatcacctc ctttaccttt aaccgtcagc aaaattgatt ttgccttgtc cccttttaca
     1081 tcctcgactt gcagtcgcgg ataaagcttc ggttttttag tcttggtttc gcggagacgc
     1141 agctcggaca gacctaacag taaatcgttt agcacctcgt tcgatgcgac ataattctgg
     1201 cgatcagcca tcagccattt ttcgccatca cgcttaacgg taatcgtttt tttggcgtct
     1261 tttacttcaa tcgccgtcac ttcgccgact ttatcggcaa gccccggcaa taggagtttg
     1321 tcctccaggc caactttgtg aac
//
LOCUS       DASCNL010000997         1660 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002052650, whole genome shotgun sequence.
ACCESSION   DASCNL010000997 DASCNL010000000
VERSION     DASCNL010000997.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002052650"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1132
                     /gene="cimA"
                     /locus_tag="QF359_13015"
     CDS             <1..1132
                     /gene="cimA"
                     /locus_tag="QF359_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019647135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HJO87873.1"
                     /translation="KAAYEAGARWVVLCDTNGGTLPDEVEQIVSEVIEHIPGDHLGIH
                     CHDDTGNAVANSLAAVQAGVRQVQGTLNGLGERCGNANLISLIPTLMLKMGYETGISK
                     EDLTKLTHISHTLDERLNRAPDRGAPYVGESAFAHKGGLHVSAVEKDPKCYEHVEPEV
                     IGNHRHIVVSDQSGKSNILAMFRDIGLEVDAKNPKVTHLVEQVKELEFSGYAYDGAEA
                     SFELLARRALETVPDYFRLSSFRVIDERRWNARDELITLSEATIKAEVKGENFMTVAE
                     GNGPVNALDSALREVLLPIYPELEDIRLVDYKVRILTPSDATGAVTRVMIESADAHGV
                     RWSTVGVSSNIIDASYGALRDSIVYKLYRDGAKAGGNLNGKS"
     gene            1138..>1660
                     /locus_tag="QF359_13020"
     CDS             1138..>1660
                     /locus_tag="QF359_13020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HJO87874.1"
                     /translation="MAGTNRKLAKTKSEAVAAAGKTPAIILIEPQLGENIGMVARAML
                     NCGLSDLRLVRPRDGWPNKQAVGTASGADIVLENAKLFETTEAAIGDLKFVYAATARD
                     RDITKEVVTPAQNAMEIRRLGGEGCGILFGGEAMGLNNDDIALTSKIVMVPLNPGFTS
                     LNLSQADLLLAYEW"
BASE COUNT          402 a          399 c          456 g          403 t
ORIGIN      
        1 gaaagcagct tatgaagccg gtgcgcgctg ggttgtgctg tgtgacacca atggcggcac
       61 cttaccggat gaggtagagc agatagtttc ggaagttatt gagcatattc caggggacca
      121 tctcggcatc cattgtcatg acgataccgg taatgccgtg gcaaactcct tggcggcagt
      181 gcaggctggc gtgcgccagg tccaaggcac gctcaatggt cttggcgaac gttgcggcaa
      241 cgccaatcta atatcgttaa tcccgacgct gatgctgaaa atgggctacg agactggtat
      301 atccaaagaa gatttaacca aattgaccca tatctctcac accttggatg agcgtctcaa
      361 ccgagcaccg gaccgcggcg cgccttatgt cggcgaatcc gcatttgccc ataaaggcgg
      421 cctgcatgtt tcggcagttg agaaagatcc aaaatgctat gagcatgtcg agccggaggt
      481 aattggcaat caccgccaca ttgtggtctc tgaccagtcg ggaaaatcca acattctcgc
      541 catgttccgg gatattggac ttgaggttga tgccaaaaat cccaaagtta cccatctggt
      601 tgagcaggtg aaggaacttg aattttctgg ttacgcttac gatggcgccg aagccagttt
      661 tgagttgctg gcccgccgtg cacttgaaac agtgccggat tatttccgcc ttagcagctt
      721 tcgcgtcatt gatgaacgcc gctggaatgc gcgcgatgaa cttattacct tgtccgaagc
      781 aacgatcaaa gccgaagtca aaggcgagaa tttcatgact gttgccgagg gtaatggtcc
      841 ggtgaacgcg ttggattctg cgctccggga agttctgttg ccgatctatc ctgaactcga
      901 agacattcgt ctggtcgatt ataaggtgcg tattttgacc ccttctgatg ccactggcgc
      961 ggtcacgcgg gtgatgatcg aaagtgcgga tgcgcatggt gtgaggtggt caaccgttgg
     1021 cgtatcttcc aacattatcg atgcttccta tggcgcgctg cgcgattcaa ttgtctacaa
     1081 gctctaccgc gatggtgcca aggccggtgg caacttgaac ggcaagtctt aaattcgatg
     1141 gcgggcacca accgcaaatt agcaaaaacc aaatccgaag cggttgccgc ggctggaaaa
     1201 accccggcaa ttatcctcat tgagccccaa ttgggtgaaa acattggcat ggttgcccgg
     1261 gccatgttga attgtgggct ctctgatttg cgattggtac ggccccgtga cggttggccg
     1321 aataagcaag cagtcggtac tgcctcaggt gctgatatcg tgctagaaaa cgccaaatta
     1381 tttgagacca ctgaggcggc aattggtgat ctaaaatttg tttatgcggc aactgcacgc
     1441 gaccgggata taaccaaaga agttgttaca ccggctcaaa atgcgatgga aatacgccgt
     1501 ttgggtggcg aaggttgcgg catcttgttt ggaggtgaag ccatgggact gaacaacgat
     1561 gacattgccc tcaccagcaa aattgtgatg gtaccactca atcccggatt tacctcgctc
     1621 aatttgtcac aagcagattt attattggct tatgaatggt
//
LOCUS       DASCNL010000998         1655 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002053817, whole genome shotgun sequence.
ACCESSION   DASCNL010000998 DASCNL010000000
VERSION     DASCNL010000998.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002053817"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            36..956
                     /locus_tag="QF359_13025"
     CDS             36..956
                     /locus_tag="QF359_13025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HJO87875.1"
                     /translation="MRIGIDLGGTKIEAICLAADGAELARQRIASPQGDYDATIRAIV
                     ELVTDIENLTEKTSSIGIGIPGTISPASGLVKNANSTWLIGKALDQDLTTALGSPVRL
                     ANDANCFTLSEATDGAAKGAANVFGVILGTGVGGGIVIDGNIVTGPNSIAGEWGHNPL
                     PWITDDERPGPDCYCGKSGCIETFLNGAALEQLYPAISYQAGTLAAEEIAELASNNEA
                     VAGRAIDIYAERLARALASVTNVLDPDVIVLGGGLSNIDKLYDQVPSLWQNWAFSDEI
                     STKLVKNRHGDSSGVRGAAWLWPEDQAETG"
     gene            957..>1655
                     /locus_tag="QF359_13030"
     CDS             957..>1655
                     /locus_tag="QF359_13030"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HJO87876.1"
                     /translation="MSSSIPSLCRECGTHFNATLEDQRCNACASPRLISHPELDSLSI
                     AHIDCDAFFASVEKRDNPELKNKPVIVGGGKRGVVAACCYIARIKGVHSAMPMYRALK
                     ACPDAVVVKPSRGKYSEVGRQIKGIMRDTTPLVESLSIDEAFLDLSGTEKLHGGSPAA
                     TLVKLIKRIEDEIGVTASVGLSYNKFLAKTASDLDKPRGFVVIGEAEALDFLGPRPVG
                     SIWGVGKSLRSKLER"
BASE COUNT          404 a          414 c          468 g          369 t
ORIGIN      
        1 cgaacacaac gagaataaat aatgcgtgtt ggaccatgag aataggcatt gatttaggcg
       61 gcaccaagat agaagcaatc tgtctggcgg cagatggggc cgagcttgca cgtcaacgca
      121 ttgcctcacc tcagggagac tatgacgcca ccattcgggc cattgttgaa ctggttacgg
      181 atatcgaaaa tttaacggag aaaacgagtt ctatcggtat cggtattccg ggtacgattt
      241 cgccggccag cggactagtt aaaaatgcca attcgacgtg gttgattggt aaagcgctcg
      301 accaagattt gacaacagcg cttggcagtc cggtcaggct tgccaatgat gctaattgtt
      361 tcaccctgtc tgaagcgacc gacggtgcag caaaaggtgc tgccaatgta tttggtgtga
      421 tactcggcac tggtgttggc ggcggcatcg tcattgacgg caatattgtt accgggccaa
      481 attcaatcgc cggagaatgg ggacataacc ccctgccctg gataaccgat gacgagcggc
      541 ctggaccgga ttgctattgt ggtaaatccg gctgcattga aacgttttta aatggggccg
      601 cgctggaaca gttgtatccg gcaataagct atcaagcagg caccctcgct gccgaagaaa
      661 ttgccgaatt ggcatcaaac aatgaagcag tcgccggcag ggcaatcgat atctatgccg
      721 agcgtctggc ccgcgcatta gcttccgtga ctaacgtgct ggaccctgac gtgattgtcc
      781 tcggtggtgg tttatcgaat atcgacaagc tctatgacca ggtgccatca ctctggcaga
      841 actgggcttt ttcagatgaa atctcgacca agctggtcaa aaaccggcac ggcgattcga
      901 gtggtgtcag gggcgctgcc tggttgtggc cggaagatca ggcggagaca ggatagatgt
      961 ccagttcaat accaagcttg tgccgggaat gcggaactca ttttaacgcc acgctagagg
     1021 accagcgttg caacgcctgc gcctcaccgc ggctaatctc gcacccggaa ctagacagcc
     1081 tttcgatcgc ccatattgat tgtgacgcct tcttcgccag cgtcgaaaaa cgcgacaacc
     1141 cggagctcaa aaacaagccg gttatcgtgg gtggcggcaa acgcggcgtc gtcgcggcat
     1201 gctgctatat tgcgcgcatt aaaggtgtcc attcggcgat gcctatgtac cgtgccctta
     1261 aagcctgtcc cgacgccgtg gtggtaaaac caagccgcgg taagtacagc gaagttgggc
     1321 gtcagatcaa agggataatg cgggatacca cgccgctcgt tgaatcgctt tcaatcgatg
     1381 aagcctttct tgacttaagc ggtaccgaaa agctgcacgg cggcagtcca gcggcaacat
     1441 tggtaaaatt aatcaagcgg attgaagatg aaatcggcgt cactgcatca gtcggcctca
     1501 gttataacaa gtttctcgcc aaaacggcgt ccgatttgga taaaccgcga ggctttgttg
     1561 ttatcggcga ggccgaagca ttggattttc tcgggccccg tccggtcggc tcgatatggg
     1621 gagttggtaa atccctgcgt agcaagcttg aacgg
//
LOCUS       DASCNL010000999         1078 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002054642, whole genome shotgun sequence.
ACCESSION   DASCNL010000999 DASCNL010000000
VERSION     DASCNL010000999.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1078)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1078)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002054642"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1078
                     /locus_tag="QF359_13035"
     CDS             <1..>1078
                     /locus_tag="QF359_13035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJO87877.1"
                     /translation="DVALLNAILNVIVEEKLYDKQYVEVNTEGFDDFATHIHNFSPDK
                     MAPLCGIEAEELRTLARKIANAGAAMIFWGMGIAQHTHGTDNARCLIALALLCGQIGR
                     PGAGLHPLRGQNNVQGASDAGLIPMMYPDYKRVTDKDAKEKFESYWGTELNPEIGLTV
                     IEIIDAILVDEISGMYVMGENPAMSDPDSHHTREALAKLDHLVVQDIFLTETANYADV
                     ILPASAWPEKDGTVTNTDRRVQLGRKALEMPGEAKQDLWIIQEIANRLELDWNYESPK
                     EVHQEMQGCMASMEHIGWERLEREAAVTYPVDSDDAPGHEVIFGDGFPTVSGRGKLVQ
                     ADVLPADELPDREYPMILTTGRILE"
BASE COUNT          300 a          229 c          284 g          265 t
ORIGIN      
        1 tgatgttgcc ctgctcaatg caatattaaa tgtcattgtc gaagaaaaac tttatgacaa
       61 acaatatgtt gaagtgaata cggaaggctt cgacgatttt gccactcata tccacaattt
      121 ttcgccagac aaaatggcac cgctttgtgg tatagaagcc gaagagcttc gaacgttagc
      181 ccggaagatt gccaatgctg gtgctgccat gattttctgg ggaatgggga ttgcacaaca
      241 tacccacggc acggataacg cccgctgcct aatcgcttta gctcttttat gcggccaaat
      301 aggccggcct ggcgcagggc ttcatccttt gcgtggccaa aataatgtcc aaggtgcgtc
      361 ggatgccggc cttataccga tgatgtatcc tgattacaaa cgggtaactg ataaagatgc
      421 caaagaaaaa tttgaaagct attggggaac agagcttaat cctgaaatag gtctaacggt
      481 tatcgaaatt atcgacgcga ttttggttga tgagatttct ggcatgtatg tgatgggtga
      541 gaatccggcg atgtctgatc ctgactccca tcatactaga gaagcgctcg caaagctcga
      601 ccatctggtg gttcaagata tattcttaac cgaaacggca aactatgcgg atgttatttt
      661 accggcatct gcctggcctg aaaaagatgg caccgtgacc aatacggatc gccgcgtaca
      721 gctcggccgg aaagccttag aaatgccggg agaggcgaaa caggatttat ggattattca
      781 ggaaatcgct aatcgactgg agctggattg gaactatgag agccccaaag aggtacatca
      841 agaaatgcaa ggttgcatgg cgtcaatgga gcatattggg tgggaaagat tggaacggga
      901 agccgctgtc acttatccgg ttgacagcga tgacgcgcca ggccacgaag taatttttgg
      961 cgatggtttt cctacagttt ccggtcgcgg caaacttgtg caggcggacg tattaccagc
     1021 agatgagtta ccggatcggg aatatccgat gattctgaca acaggtagaa ttcttgaa
//
LOCUS       DASCNL010001000         1700 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002054750, whole genome shotgun sequence.
ACCESSION   DASCNL010001000 DASCNL010000000
VERSION     DASCNL010001000.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002054750"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1432)
                     /locus_tag="QF359_13040"
     CDS             complement(<1..1432)
                     /locus_tag="QF359_13040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJO87878.1"
                     /translation="MTEQTPRLELEGITKTYPGVIANNNVSMKIMPGEIHALLGENGA
                     GKSTLVKFIYGVQKADSGILKWEGQEMVVANPNVARKLGIGMVFQHFSLFDAMTVEEN
                     IAIGISPELAAGDLSQRIHDVSQQYGLPLDPTRYVHTLSVGERQRIEVVRCLLQDPKL
                     LIMDEPTSVLTPQEVDELFKTLRRLSDEGVSILYISHKLQEIKDLCHFATIMRMGEVV
                     DNCIPSEESPRSMAEMMMGANLVSPEKTDKADRGAPHLVVRDLSLASSHQHGVDLKKI
                     NLEVRTGEILGIAGIAGNGQKELMEVLSGEMLVKDQNAVVIGNVPVGKSGPGIRRDAG
                     LGFVPEERLGHGAVPEMSLWENAFLSASKTMNLMSKGFININGSVEYAQNVVSEFSVK
                     TPSVEHAANSLSGGNLQKFIFGREILQSPGVIVVLQPTWGVDAGSAAFIRQSLLDLAA
                     KGAAVLVISQDLEELFEVSDRMSVICE"
     gene            complement(1429..>1700)
                     /locus_tag="QF359_13045"
     CDS             complement(1429..>1700)
                     /locus_tag="QF359_13045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdopterin binding
                     subunit"
                     /protein_id="HJO87879.1"
                     /translation="YKIPGSRDIPPEFNIHILEDAPNRMPTIYRSKAIGEPPLMLAIS
                     VWLAIRDAVKRLGDGSKMPNLNTPATPEAILKAVTEIRAQELGAT"
BASE COUNT          416 a          456 c          388 g          440 t
ORIGIN      
        1 cttcgcaaat cactgacatg cggtcagaga cttcgaacaa ttcttctaga tcttggctga
       61 tcaccagaac ggctgcgccc ttagcagcca agtccaaaag cgattgccga ataaatgctg
      121 cggaaccagc atcaacaccc caggttggct gaagcacgac aataacgccg gggctttgca
      181 atatttcccg gccaaagatg aacttctgta aattgccgcc ggacagactg ttagcggcat
      241 gttcgacact tggtgttttt acactgaatt ccgagacaac attttgggcg tattccaccg
      301 atccattgat attaatgaaa cctttggaca tcaaattcat tgttttggaa gctgacaaaa
      361 aagcgttttc ccacagcgac atttcgggca cagccccatg gcctaaacgt tcttccggca
      421 caaaccctaa accggcgtcc cgcctgatgc ccggtccgga tttgccaacc ggcacattac
      481 caatcaccac agcattttga tctttgacca gcatctcacc gctcaacacc tccatcagtt
      541 ctttttggcc gttaccggca atgcccgcaa taccgaggat ttcgccggta cgcacttcga
      601 ggttaatttt tttgaggtcg acaccatgct gatgactgga ggcgagactc aaatcacgca
      661 ctaccaaatg tggcgcacca cgatctgctt tatcagtttt ttccgggctg acgagatttg
      721 cacccatcat catttcggcc atcgaacggg gtgattcttc agacggaatg cagttgtcga
      781 cgacctcgcc cattcgcata attgtggcaa aatggcaaag gtctttgatc tcttgtaatt
      841 tgtgagaaat ataaaggatc gaaacacctt cgtcagacaa tcgcctaagt gtcttaaata
      901 actcgtcgac ttcttgcggc gttaaaaccg aagtcggctc atccataatc agcagtttcg
      961 ggtcttgcag caggcagcgt accacttcga tgcgttggcg ctcaccgacc gaaagtgtat
     1021 gaacatagcg tgttgggtca agcggcaggc catattgctg tgagacatcg tgaatacgct
     1081 gggaaagatc accggcagcg agttccggcg aaataccaat ggcaatattt tcctccaccg
     1141 tcatcgcatc gaacagcgag aaatgctgga agaccatacc aataccgagt ttgcgggcta
     1201 cgttgggatt ggcaacaacc atctcctgac cctcccattt taggatgcca gaatctgcct
     1261 tttgcacacc ataaataaac ttgaccaggg tcgatttacc ggcgccgttt tcgcctaaca
     1321 atgcatggat ttcgcccggc ataattttca tgctgacgtt gttattggcg attaccccag
     1381 gataggtttt ggtaatcccc tcgagttcta atcgcggtgt ttgttctgtc atgttgcccc
     1441 caactcctga gccctgattt ccgttaccgc ttttaatatc gcttccggtg ttgccggagt
     1501 attgagattt ggcatctttg agccgtcgcc caagcgtttc actgcatccc ggattgccag
     1561 ccaaactgag atcgccagca tcaatggcgg ctcaccaatc gcttttgacc ggtaaatcgt
     1621 tggcattcga tttggcgcat cctccaggat gtgaatatta aactcaggcg ggatatcccg
     1681 gctaccaggg attttgtaag
//
LOCUS       DASCNL010001001         1089 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002054868, whole genome shotgun sequence.
ACCESSION   DASCNL010001001 DASCNL010000000
VERSION     DASCNL010001001.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1089)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1089)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002054868"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1069)
                     /gene="rfaE2"
                     /locus_tag="QF359_13050"
     CDS             complement(<1..1069)
                     /gene="rfaE2"
                     /locus_tag="QF359_13050"
                     /inference="COORDINATES: protein motif:HMM:NF012515.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HJO87880.1"
                     /translation="MEAIEGATKDRVITLAKSALKDCAAMVLADYAKGVLTPEIIQEL
                     IELANTAKVPVIIDPQSIDYSRYRGADLITPNRKELADATAMAVGDDDEISAAARKLI
                     TEHKITSVLATRSGDGMSLIGADSFDHFTAEAHEVFDVSGAGDTVAATIAASLAAGVD
                     LNEAVQLANTAAGIVVAKVGTAVAYASDIIEALHRQEFSLSEVKILSLNSAIDHAEVW
                     RLKGYRIGFTNGCFDLLHPGHISTIAKAKAACDRLIIGLNNDESVKRLKGEDRPVQSE
                     AARAQVLAGLENVDVVVIFSEDTPANIIDAIKPEVFVKGADYSVEEIPEAAIVQAYGG
                     EIVLAELEDGHSTTATIAKLNK"
BASE COUNT          234 a          299 c          284 g          272 t
ORIGIN      
        1 atttattcag cttagcaatc gtcgcggtgg tgctgtggcc gtcttcaagt tccgccagta
       61 caatctcgcc accgtaagcc tgaacgattg cggcctccgg gatttcttcg acactgtaat
      121 cggcgccttt gacaaacact tccggcttga tggcgtcgat aatattggcc ggggtgtctt
      181 ctgagaaaat taccacgacg tcgacatttt cgagacccgc tagaacttgc gcgcgggcgg
      241 cttcggattg caccggccgg tcttcacctt taaggcgctt aaccgactca tcattattga
      301 ggccaataat cagccggtcg caggcggctt tggctttagc gatggtagag atatgacccg
      361 gatgcagcag atcgaaacag ccattggtaa aaccgatcct atagcccttc aagcgccaga
      421 cttcagcgtg atctatcgcc gagttcagtg acagtatttt aacttcactt aaagaaaatt
      481 cctgccggtg cagcgcctcg ataatatcgc tagcataagc gaccgcggtg ccgactttgg
      541 cgacgacgat accggcagcc gtattggcca gttgcacggc ttcgttcaag tcaacgccgg
      601 cggctaggct ggcggctatg gttgcggcaa ccgtgtcacc cgcgcccgag acatcaaaaa
      661 cttcgtgcgc ctctgcggta aaatggtcaa agctatcggc accgattagg ctcataccat
      721 caccgctgcg ggtagccagc accgatgtta ttttatgttc ggtgattaat tttcgcgcgg
      781 cagcgctaat ttcatcatca tctcctaccg ccatagcggt tgcatcggca agctctttac
      841 ggttgggcgt tatcagatca gcgcctcgat agcggctgta atcaatgctc tgggggtcaa
      901 tgataaccgg caccttggcg gtattggcaa gctcaatgag ttcttggata atctccggtg
      961 tcagcacgcc tttggcgtaa tcggccaaga ccatagccgc acaatctttt aaggctgatt
     1021 tggcgagggt aataacccga tctttggttg cgccttctat ggcttccacg ctctcgtcat
     1081 cggcgcgca
//
LOCUS       DASCNL010001002         2200 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002055064, whole genome shotgun sequence.
ACCESSION   DASCNL010001002 DASCNL010000000
VERSION     DASCNL010001002.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002055064"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            11..172
                     /locus_tag="QF359_13055"
     CDS             11..172
                     /locus_tag="QF359_13055"
                     /inference="COORDINATES: protein motif:HMM:NF016955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HJO87881.1"
                     /translation="MIEMLWEVAYADGNVDHFEANLISRIAGLIYVNDRGRGDAKKRV
                     IARLGIGVS"
     gene            237..572
                     /gene="fdxA"
                     /locus_tag="QF359_13060"
     CDS             237..572
                     /gene="fdxA"
                     /locus_tag="QF359_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011387838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HJO87882.1"
                     /translation="MTYIVTENCIKCKYMDCVEVCPVDCFYEGENFLVISPDECIDCG
                     VCEPECPAEAILPDTEDGLDEWLEINTRLAVVWPNITVKGESPADADEWKDKEGKRAE
                     LSESPGVGS"
     gene            991..1512
                     /locus_tag="QF359_13065"
     CDS             991..1512
                     /locus_tag="QF359_13065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011387840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HJO87883.1"
                     /translation="MAKARTTKKKVKLSFKPGDFVVYPTHGVGQVQGIEKETIGGYNL
                     KLVVVTFDNDRMTLRVPTNKMETSGLRKVSSRKIMDNAVTTLKGRARVKRTMWSRRAQ
                     EYEAKINSGDPVLIAEVVRDLHRNVGQPDQSFSERQIYEAALERLAGEVAVVENIDKE
                     KATEKLEAVLQAA"
     gene            1584..2078
                     /locus_tag="QF359_13070"
     CDS             1584..2078
                     /locus_tag="QF359_13070"
                     /inference="COORDINATES: protein motif:HMM:NF024106.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative molybdenum carrier protein"
                     /protein_id="HJO87884.1"
                     /translation="MSDYPDTPDSYIIDKIISGGQTGVDRAALDAALRLGIECGGWCP
                     LGRWAEDGEIDDHYPLQETESPDPAERTSMNVLDADGTLVLADEGLDDGSMLTVKLAR
                     KLGKSCLIFDFQGKGYVSDVRDWIVRDEIKILNVAGCRESISPGIYELSIGFLTELFG
                     SLKS"
BASE COUNT          594 a          433 c          585 g          588 t
ORIGIN      
        1 aaggatcgaa atgattgaaa tgctgtggga agtcgcttat gccgatggta atgttgatca
       61 cttcgaagca aatttaatta gcagaattgc cgggttgatt tacgtcaatg accgcggccg
      121 tggagatgct aaaaaaagag tgattgcaag acttggcatt ggtgtatcat aagtgtaaga
      181 aagaatgcgc ctgttaatta ggcgaacaat aatataggga tttaacggag accaacatga
      241 cctacatcgt caccgaaaat tgtatcaaat gtaagtatat ggattgcgtc gaggtttgcc
      301 ccgtcgattg cttctacgaa ggtgaaaact ttttggtaat cagccccgac gaatgcatcg
      361 attgcggtgt ttgcgagccg gaatgtccag cagaagctat tttgccggat accgaagatg
      421 ggttggatga atggctggaa ataaacaccc gtctggcggt tgtttggcca aatattacgg
      481 ttaaaggcga aagcccggct gatgccgatg aatggaaaga taaagaaggc aaacgcgccg
      541 aattgagcga aagtccgggt gttggcagtt aaagaccaaa attacagtaa cctattgaat
      601 taaaagaatt atggctcgtt tttgcggacc atttttccaa tttagcgccg tttttaatta
      661 atttattaca catgttaata aattggcctg tattttaagc ctattttttt ggtataatct
      721 atctgctgat cacgtgagct ggtaaaatgg tagctgggtc ggcattgttg tgtgagcggt
      781 tctttgagct tctagattgg ggcatccggg taatcaattg ggtcagtaaa attgaggctg
      841 gcatactagg aatgtaaaga attcgctaac gaaacagtga tatcaaataa aatttatgca
      901 aatgggcgcg cccgaggcgg ctgaaattaa ccgagcgggt gagatgattt tttagtgctt
      961 attggcaaat tggcggagaa atagtgaatt atggcgaaag caagaacgac taaaaagaaa
     1021 gttaaattat cctttaaacc tggcgatttt gtcgtctacc cgacccatgg tgttggtcag
     1081 gtgcaaggaa tcgaaaaaga aaccatcggt ggctacaatc tgaaactcgt tgtcgtgaca
     1141 tttgacaatg accggatgac gctccgcgtg ccgaccaata aaatggaaac ttcgggtttg
     1201 cgcaaagtga gctcgcgcaa aattatggat aacgcggtaa cgacattgaa aggccgcgcc
     1261 cgggttaaac gcaccatgtg gagccgccgc gcgcaggagt atgaagccaa gatcaattcc
     1321 ggcgatccgg tgctgatagc tgaagttgtt cgcgatcttc accgcaatgt cggtcagcct
     1381 gatcaatctt tcagtgagcg ccagatttat gaggctgcgc tggaacgttt ggccggagag
     1441 gttgctgtgg ttgaaaatat tgataaggaa aaagccaccg agaaactgga agcggttctg
     1501 caggcagctt aagcacaaaa ttttattttt gaggggcgcc gagatttttc tctggcaccc
     1561 ttttttattt gctattatca cctatgtctg attacccaga tacccctgat tcttatatta
     1621 tcgataaaat catttccggt ggccagaccg gggttgatcg cgccgccctt gatgcggcgc
     1681 tccggctggg tattgagtgt ggcggctggt gccccttggg gcggtgggca gaggatggtg
     1741 agatagatga tcactatccg ctgcaggaaa ccgaaagtcc ggacccggcg gaacgcacgt
     1801 cgatgaatgt gttggacgcc gatggcacgt tggtactcgc cgatgaggga cttgatgacg
     1861 gctccatgct aaccgtcaag cttgcccgga aacttggtaa atcctgcctg atatttgatt
     1921 ttcaaggcaa aggttatgtc agtgatgtgc gtgattggat tgtccgcgac gagataaaaa
     1981 ttctcaatgt ggccggctgc cgcgagagca tctcacccgg tatctatgaa ttgtcgatcg
     2041 gctttctgac cgaacttttt ggcagtctca aaagttgata aattaacact tttactcgga
     2101 gattattttg actagcttgc cgcggcgcag attatcattg gcggctaagc cgttgatcac
     2161 ccggaaagtt tcttccttaa aatcatcaat attcatctgg
//
LOCUS       DASCNL010001003         2668 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002056195, whole genome shotgun sequence.
ACCESSION   DASCNL010001003 DASCNL010000000
VERSION     DASCNL010001003.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002056195"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="QF359_13075"
     CDS             <1..361
                     /locus_tag="QF359_13075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HJO87885.1"
                     /translation="LIARVRAVLRRADPEFGEEKIEYAGISLDLTAHKASRNGRAIHL
                     GPTEYRLLQVLMERPTRVFSREQLLDLVWGREIYVEERTVDVHIRRLRKALNENDEAD
                     LIRTVRRGGYAIDIGKD"
     gene            620..2302
                     /gene="ettA"
                     /locus_tag="QF359_13080"
     CDS             620..2302
                     /gene="ettA"
                     /locus_tag="QF359_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HJO87886.1"
                     /translation="MASYQYIYVMKQLSKTFQGGRELMKDISLSFLPGAKIGVLGANG
                     AGKSTLLRIMAGIETEYNGEVWAAEGARVGFLPQEPELDPSKDVEGNAMEGVGEIKDL
                     IDRFNEVSAKFAEPMDDDEMNTLLEEQGALQEQIDAVNGWELERTVEMAMDALRCPPG
                     DADVTTLSGGEKRRVALCRLLLQKPDLLLLDEPTNHLDAESVAWLELHLQEYPGTVVA
                     ITHDRYFLDNVAGWILELDRGRGIPYEGNYSAWLEQKQKRLAQEEKTEQARKRTLTNE
                     LEWIRQSPRARQAKSKARITAYEKLRSEADEKTPDTAQIIIPQGPRLGDLVIEAADLA
                     KGFEDRLLFEELSFKIPPGAIVGIIGANGTGKTTLFKMISGDEQMNNGSIRLGDTVKL
                     GYVDQSREELDARKTVWEEISEGLDEIELGHRTMQSRAYVSQFNFKGPDQQKKVGQLS
                     GGERNRVHLAKVMKSGANVIMLDEPTNDLDVDTLRALEEALLAFPGCVLITSHDRWFL
                     DRIATHIIAFEGDSQVVWFEGNYDDYEADRHNRLGALADQPHRIKYRPLTRD"
     gene            complement(2299..>2668)
                     /locus_tag="QF359_13085"
     CDS             complement(2299..>2668)
                     /locus_tag="QF359_13085"
                     /inference="COORDINATES: protein motif:HMM:NF017319.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO87887.1"
                     /translation="ASRQERQLYLKLFKEFIIMTYAKRFKAYTNAKLKISDTTSRKTS
                     AFVKSQITRARAKPIRIIWRVKFTDGKYQIVDIVVEGVSWIRTQRSEFVSVIRNSGGK
                     VSGLIDALIKKITFLKSSAS"
BASE COUNT          713 a          581 c          699 g          675 t
ORIGIN      
        1 gttaatcgct cgggtgcgcg ctgtattacg ccgtgccgat ccggaatttg gtgaagaaaa
       61 aatagaatat gcgggcattt cactggattt aaccgctcat aaagcttcga gaaatggccg
      121 cgcgatacat ctcggtccta ccgaatatcg cttattacag gttcttatgg aacgaccaac
      181 cagggttttt tcccgcgagc aattattgga tttagtgtgg ggccgcgaaa tttatgtcga
      241 ggagcgaacc gttgatgttc acatccgccg cttgcgtaaa gcgctcaatg aaaatgatga
      301 agcggatttg atcagaaccg tacgcagggg tgggtatgcc attgacatcg gtaaagatta
      361 agcgggttat ttttgcaaat atcttcgggt taaaacatct atttaaagct gctttgaaat
      421 gtcaatggtt ttaagctgac ctcaattgaa aaggctgatc tcatcgcttt tttgacgtca
      481 ttgaccgatg aaacttttct caccgatcct tagttttctg atccgtctaa atgatactgg
      541 ttgcagattg catccaggct tctgctgggc tacataaacc gccaatgcaa atcaaaactt
      601 atttaagccg gagcacctaa tggcgtccta ccaatatatt tatgtgatga aacaacttag
      661 taaaaccttc caaggtgggc gtgagttgat gaaggatatt tcactgtcat ttctgcccgg
      721 ggcaaaaatc ggtgttctcg gcgccaatgg tgcgggtaaa tcgactttac taagaataat
      781 ggcggggatt gaaaccgaat ataatggcga ggtttgggca gctgaaggcg cgcgtgtcgg
      841 atttttaccg caggagccgg aactcgatcc ttcaaaagac gtcgaaggta acgccatgga
      901 aggggtcggt gaaatcaaag atctgatcga ccgctttaac gaggtcagcg caaaattcgc
      961 tgagccaatg gatgacgacg aaatgaacac tcttttagaa gagcaaggcg ccttgcagga
     1021 acaaattgat gcggtcaatg gctgggagct tgagcgtaca gttgaaatgg ccatggatgc
     1081 gttgcgttgt ccgcctggtg atgctgatgt gacaacgctt tcaggaggtg agaaacgccg
     1141 ggtggcactc tgccggttat tgctgcaaaa gccggatttg ttgctgcttg atgaaccaac
     1201 caatcatctc gacgccgaat cggtggcgtg gctggaactg catttgcagg aatatccagg
     1261 aactgtggta gcgatcaccc atgatcgtta ttttttggac aatgttgccg gctggattct
     1321 cgagctcgat cgtggccggg gcattcctta tgaaggcaat tattctgcct ggctggagca
     1381 aaaacaaaaa cgccttgctc aagaagaaaa aaccgaacag gcacgtaaac gcaccctcac
     1441 caatgagttg gaatggatca gacaatcgcc acgggcgcgc caggccaaaa gcaaagcacg
     1501 tatcacggca tatgaaaaac ttagatcaga agccgacgaa aagactccgg acaccgctca
     1561 aatcattata ccacaaggac cacgtctggg tgatttggta atcgaggcag cagaccttgc
     1621 taaaggcttt gaagaccgcc ttttatttga agagttgagt ttcaaaattc cgccgggtgc
     1681 aattgtcggt atcattggtg ccaatggtac cggtaaaacg acattgttta aaatgatttc
     1741 cggtgatgaa caaatgaaca atggctcaat ccgtctcggc gatacggtca agcttggcta
     1801 tgttgatcaa tcccgtgaag aactggatgc gagaaaaacc gtttgggagg aaatctccga
     1861 agggttggat gagatcgagc tagggcatcg cacgatgcaa agccgggctt atgtctcgca
     1921 gtttaatttt aaaggccctg accagcaaaa aaaagtcggg caattgtctg gtggtgaacg
     1981 caaccgggtt catctcgcca aagtgatgaa gtcgggcgcc aatgtcatca tgctcgatga
     2041 gccgaccaat gatcttgatg ttgataccct gcgcgcccta gaagaggctc tgctagcctt
     2101 tccaggctgt gtgttgatta caagtcatga ccgctggttc ctggatcgta ttgccactca
     2161 catcatcgcg tttgaaggcg atagccaggt ggtctggttt gagggtaatt atgatgacta
     2221 cgaggcggat cgccataacc gactcggcgc cctggcggat cagccgcacc ggattaagta
     2281 taggccccta acacgggact agctggcaga tgatttgaga aaggtgatct ttttgatgag
     2341 ggcgtcgatt agtcctgaga ctttgccgcc gctattgcga ataacggaaa caaactcaga
     2401 gcgctgggtc cgaatccagc taacaccctc aacaacaata tcgacaatct gatacttccc
     2461 gtcggtaaat ttgacccgcc atataatacg tatgggtttg gccctggctc tggtgatttg
     2521 ggatttaaca aaggccgaag ttttgcggct ggtcgtatcg ctaatcttta gtttagcatt
     2581 agtataggct ttgaagcgct tggcataagt catgatgata aattctttga acaatttcaa
     2641 atatagttga cgctcttgac gtgatgcg
//
LOCUS       DASCNL010001004         3391 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002057233, whole genome shotgun sequence.
ACCESSION   DASCNL010001004 DASCNL010000000
VERSION     DASCNL010001004.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3391)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002057233"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="QF359_13090"
     CDS             complement(<1..548)
                     /locus_tag="QF359_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011489335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate decarboxylase"
                     /protein_id="HJO87888.1"
                     /translation="MSKNIDKLAKIVFDAQINATAISQLSETESFTLEEAYRVQAKSI
                     DMRLAAGEHRVGMKMGFTSRAKMVQMGVDDMIWGRLTNSMLVEDGGEIDISNYVHPRV
                     EPEIAYLLKAPLSGPLSTVEAWNAVEAIAPAMEIIDSRYENFKFTVEDVVADNSSSSG
                     FIIGPWCKPDSDIANLGMVMEF"
     gene            complement(574..1359)
                     /locus_tag="QF359_13095"
     CDS             complement(574..1359)
                     /locus_tag="QF359_13095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011489336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJO87889.1"
                     /translation="MSDDTIQKAADWLHEAYRTGKACEPVRDLLPEGDVDAAYAVQEI
                     NTERRLASGARMVGRKIGLTSKLVQKQLGVDRPDFGILFADMSMPDGEEVETSSLLAP
                     RVEAEITYVLEKDINFEKPTNSEVIDAIAYATPSIEIVDSRIKDWNIKIQDTVADNAS
                     AVLYVLGNQKIKIENFDGRMCGMVMECQGEPVSVGAGAACLGHPINAVRWLAEEMVNR
                     GRPLSAGDVVMSGALGPMVGVEAGQVYEVRINGLGSVRTAFAA"
     gene            1560..2399
                     /locus_tag="QF359_13100"
     CDS             1560..2399
                     /locus_tag="QF359_13100"
                     /inference="COORDINATES: protein motif:HMM:NF014899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87890.1"
                     /translation="MSDQESGVIATVIASHTPRMAYEDKAWDFTLGLIDGLKELGASL
                     RELNPDLIVVNTTHWITTFDWVITSHDHHKGICIAEEAPHLIPELPYDRPGDRAYAEA
                     LNDDLNGAEIPSYTTDAKHFHWDYGTAVPLQYLDPESKIPAVLTPTCYASTLDENLQV
                     GRQIDATAKHLGKRAVVIVSNALTHLVVRGPDTWPLPEHMEMDHKFIDMVKAADVDGA
                     TNYLPDYARDAKCEMGGRGLGVFLGASKAMEESAGNLSGAQFGPYAQSSASGNANLSL
                     VAT"
     gene            complement(2396..3172)
                     /locus_tag="QF359_13105"
     CDS             complement(2396..3172)
                     /locus_tag="QF359_13105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HJO87891.1"
                     /translation="MDQLPLLTDPLFYLVAIPAVITMGIAKSGIGGTGSLATPLMALA
                     VSVPQAAAILLPIICIADIFAIWAYRRTWHKKNLMIMIPAATIGIIVGAFSFKFLDPA
                     AIKLIIGVIAVAFALVRFLGYVHKKELGPPTQPAIVKGGFWCAMCGFTSFVAHSGGAP
                     LNVYMIPQRLDKTMYMGTLAIFYAYVNYAKIIPYWWLGQFHITNLTTSLVLLPIVPVG
                     ILLGLWIHRKVNDALFYRIIITLLFLTGVKLCYDGITGLI"
     gene            complement(3184..>3391)
                     /locus_tag="QF359_13110"
     CDS             complement(3184..>3391)
                     /locus_tag="QF359_13110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HJO87892.1"
                     /translation="AGLYDCMPYLGESLMALSQGKFVPVAVGMLIKNTEGDLLGAAGV
                     SGDTADNDEIACIAGIGAAGLVVE"
BASE COUNT          900 a          922 c          788 g          781 t
ORIGIN      
        1 tcaaactcca taaccatgcc aagattggca atatcactat cgggcttaca ccagggacca
       61 ataataaatc cggatgagga agagttatcg gcgaccacat cctcgacggt aaatttgaaa
      121 ttctcgtagc gggaatcaat gatctccatg gccggcgcaa tcgcttcaac tgcgttccag
      181 gcttccaccg tcgaaagcgg accggataac ggcgctttca gcaaataggc aatttctggc
      241 tcaacccgag ggtggacgta gtttgaaata tcgatctcgc cgccgtcctc gaccagcatc
      301 gaattggtga gacggcccca aatcatatca tcaacaccca tctgcaccat tttagcgcgg
      361 ctggtgaaac ccattttcat accgacccga tgctcaccag cagcgaggcg catatcgata
      421 cttttagcct ggacgcggta agcttcctca agggtgaagc tttcggtttc ggataattgc
      481 gaaatcgccg ttgcgttaat ctgcgcatcg aaaacgatct tggccagctt atctatattt
      541 ttactcacct gaaaatctcc taaatatttg ggatcaggct gcaaacgctg tgcgaacaga
      601 gcccagacca ttgatgcgga cttcgtagac ctgaccagct tcaacgccga ccatcggtcc
      661 caaggcaccg gacattacca catctcctgc cgaaagcggc cgtccgcgat tgaccatttc
      721 ttcagctagc caacgcaccg cattgatggg atgacccaaa caggccgccc cggcaccgac
      781 agaaaccggc tcgccttggc attccatcac catgccgcac atacggccgt caaaattttc
      841 gattttgatt ttttgattgc ccagcacata gagcacggct gacgcgttat cggcgaccgt
      901 atcctggatt ttgatattcc agtctttgat gcggctatca acgatctcga tactcggtgt
      961 tgcataggca atagcatcaa tcacttcaga attggtcggt ttttcaaaat taatatcttt
     1021 ttcaagcaca taggtaatct cggcctcgac tcgcggcgcc agtaaagaac tggtctcgac
     1081 ctcctcgcca tcaggcatcg acatatctgc aaacaagatg ccaaaatccg gacggtcaac
     1141 gccgagttgt ttttgcacca acttggatgt cagaccgatt tttcgcccga ccatgcgggc
     1201 gccactggca agacggcgtt cagtattaat ctcctgcact gcataggccg catcgacatc
     1261 gccttccggc aatagatcac gcacgggctc acaagctttg cctgtcctat aagcttcgtg
     1321 cagccagtcg gccgcttttt gaatagtgtc gtcgctcatt atgttctcct gataagtatt
     1381 ttttgtgctc ttgaagcgtt acgtaaatat taccggtctc caggtagaac tccagcgaat
     1441 attcgccacc cacgatgatg gttgctcctt cttagttagc gactgcataa taagccagca
     1501 ctttatccct gcgaccccat aacttaaatt agtaaaagaa attttatcag gagaacataa
     1561 tgagcgatca ggaatcagga gttattgcca cggttattgc gtcacatacg ccgcggatgg
     1621 cttacgaaga caaagcttgg gattttaccc tcggcctaat cgatggcctg aaagagctgg
     1681 gggcaagttt acgtgagttg aatcccgatc taattgttgt caacacgacc cattggataa
     1741 ccactttcga ttgggttatt acttctcatg atcaccacaa aggcatatgt attgccgaag
     1801 aggcgcccca tctgataccg gaattgccct atgaccggcc cggtgaccga gcttacgcgg
     1861 aagcgctcaa cgatgacctc aatggcgctg aaattccaag ctacaccact gacgctaaac
     1921 attttcactg ggattatggc actgctgtac cactgcaata tctcgacccg gaaagtaaaa
     1981 ttccggccgt actgacgccg acttgctatg cttcaacatt ggatgaaaat ttgcaagtgg
     2041 gccgccaaat cgacgccacc gctaaacact tgggcaagcg cgcagtcgtc attgtcagta
     2101 atgcgctcac gcatctggtc gtccgcggcc cggacacatg gccgctacct gagcacatgg
     2161 agatggatca caaatttatt gatatggtca aggccgccga tgtcgatggc gcaaccaact
     2221 atctgcccga ctatgcgcgc gacgccaaat gcgaaatggg tggacgtggg ctcggtgtgt
     2281 ttttaggtgc ctcaaaagcg atggaagaaa gcgccggcaa tctttctgga gcgcaattcg
     2341 gtccctatgc gcaaagctcg gccagcggca acgccaattt atctttagtc gctacttaaa
     2401 tgagaccggt tatgccgtcg taacaaagct tcactccagt taaaaatagc aacgtgatga
     2461 tgatgcggta aaacagcgcg tcattcacct ttcggtgaat ccacaatccc agcaatatgc
     2521 caaccggcac aatcggcagc agcaccagtg aagtggtgag attagtgata tgaaattgcc
     2581 caagccacca atagggtatg atcttggcat aattcacata agcatagaag atcgccaaag
     2641 tgcccatata catcgtttta tcgagacgct gaggaatcat atagacgttc agtggcgccc
     2701 caccggaatg ggcgacgaag ctggtaaaac cgcacatcgc acaccaaaat ccacccttaa
     2761 caatcgccgg ctgggtcggt ggccctaatt cttttttatg cacgtaacca agaaatcgaa
     2821 cgagagcaaa agcgaccgcg atgacgccaa tgatgagttt tatggccgcg ggatcaagaa
     2881 atttaaaact aaatgcacct acaataatac cgattgtcgc cgccgggatc atgatcatca
     2941 gatttttctt atgccaagtt ctgcgataag cccagatggc aaaaatgtcg gcaatgcaga
     3001 tgatcggcag caaaatggca gcggcttgcg gcaccgaaac agcaagcgcc atcagcggcg
     3061 tcgccaaact accggtaccg ccaattccag acttggcgat ccccatggta atcaccgccg
     3121 gaatggcgac tagataaaac agcgggtcag ttaagagggg caattggtcc atgtaaaaaa
     3181 gacttactcc accaccaatc cagctgcccc aatgccggcg atgcaagcga tttcatcgtt
     3241 gtcggccgta tcgccactga caccagcagc gcccaataaa tcaccctcgg tgttcttaat
     3301 tagcatgcca accgcgaccg gtacgaattt accttgcgac aaggccatca ggctttcccc
     3361 gagataaggc atacagtcat aaaggcctgc g
//
LOCUS       DASCNL010001005         1609 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002057966, whole genome shotgun sequence.
ACCESSION   DASCNL010001005 DASCNL010000000
VERSION     DASCNL010001005.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002057966"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1151)
                     /locus_tag="QF359_13115"
     CDS             complement(<1..1151)
                     /locus_tag="QF359_13115"
                     /inference="COORDINATES: protein motif:HMM:NF018513.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO87893.1"
                     /translation="MVSMTLIGLLGLLVLFVLLGLRFPVALAMIFVGTVGTIVATANR
                     FLNVGMSADLAWARGLKTAMSNLSGETFEAASNFNLLVIPMFILMGNLAGVSGMSRDL
                     FTAAYRWIGHYRGGLASATIAACAGFAALSGSSLASAVTMGRVALPEMKRFKYAPELS
                     TGAVAAGGTLGFLIPPSGGMIIYAILTDQSIGRLFIAGVIPGIVLTLLFIGTIWLLVR
                     LKPAKGPAGERSTVAQRRQSLGAAIPILFVVGVTIGGMYTGFFTPVEASAVGAFLTLV
                     VGIVRRSLRWSMAREIILETMKSTSTVFLIIIGAFIFIPFMSLTGLAESMVTFLTSLP
                     VGDLGILIIVILIYMFLGTFLESIAMLVLTIPVVVALATELNWDLVWFG"
     gene            complement(1139..>1609)
                     /locus_tag="QF359_13120"
     CDS             complement(1139..>1609)
                     /locus_tag="QF359_13120"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO87894.1"
                     /translation="GLGLSFMVLLTFFNVIVMRKILNDPILGAEDIMALNLVFIVSIA
                     IPFGGRVGAHIEIEIFDSWISPTFSRWSQFVLRLLATALVMTLAYRLYDSGVSAHKFG
                     EATQQLLISYEPYYYIMAVLVAVYSLILFSDAVQLWVRGEIKQIGSSGETAWSV"
BASE COUNT          485 a          427 c          387 g          310 t
ORIGIN      
        1 atgccgaacc aaaccaagtc ccaattcagc tctgtcgcga gtgccaccac gactgggata
       61 gtcaagacga gcatggcgat gctttccaga aacgtgccga ggaacatgta aattagaata
      121 acaatgatta aaattcccaa atcccctaca ggcaacgagg taaggaaggt caccatgctc
      181 tccgccaggc ctgttagaga cataaagggt atgaaaatga aggcgccaat aatgatgaga
      241 aataccgttg aagttgactt catggtttca aggatgatct cccgtgccat ggaccatcta
      301 agagaccggc gcacgatacc cacgacgagt gtcaagaatg cacccactgc cgatgcttcc
      361 accggcgtaa agaagcccgt gtacatgcca ccgatggtga cgccgacgac aaacaatatt
      421 ggaatggccg ctcctaggga ttggcgacgt tgtgccaccg tcgatcgttc acccgccggt
      481 ccctttgccg gttttaaacg gaccagcagc caaattgtac cgataaataa cagggtcagc
      541 actatacccg gaatcacgcc ggctatgaac aagcgaccaa tcgactgatc ggtcaagatg
      601 gcgtaaataa tcatcccgcc cgatggcgga attaggaaac ctaatgtgcc gccggctgca
      661 acggcaccgg tcgaaagctc gggggcgtat ttaaaccgct tcatctcagg caaagcgacc
      721 cgtcccatcg taaccgccga ggcgagagac gaaccggata aagctgcaaa tccagcgcag
      781 gcagctattg ttgccgatgc cagtccgccc cggtaatgtc cgatccaacg gtaagcggca
      841 gtaaataaat cacgtgacat gcccgaaaca cccgccaaat tacccatcag tataaacatc
      901 ggaataacca ggagattaaa attggatgcg gcttcgaatg tctcgccgga taaatttgac
      961 atagctgttt tcaagccgcg tgcccacgcc agatccgccg acataccgac atttaaaaat
     1021 cggtttgccg tcgccactat cgtgccaact gttccaacaa aaatcatcgc caaagccacg
     1081 ggaaaccgaa gccccaacag cacgaatagc acgagcaggc cgagtaggcc gataagggtc
     1141 atactgacca tgcagtctct ccgctactac caatttgctt aatttctcca cggacccaca
     1201 gctgcacggc atcactgaac aggattaggg aataaacggc gacaagaacg gccatgatat
     1261 agtagtaggg ttcgtaggag atcagcagct gttgtgtggc ttcgccgaat ttgtgtgctg
     1321 agacaccaga atcataaaga cgataggcaa gcgtcataac cagtgccgtt gccaaaagtc
     1381 gcagcacaaa ttgagaccag cgagagaaag taggtgaaat ccaagaatca aatatttcaa
     1441 tctcaatatg cgcgcctacc cttccaccga acggaatggc aatcgaaact ataaagacga
     1501 gattgagagc catgatgtct tcggcgccga gtatcgggtc attaagtatt ttacgcataa
     1561 cgattacgtt aaaaaacgtc agcagaacca tgaatgaaag tccaaggcc
//
LOCUS       DASCNL010001006         5326 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002058456, whole genome shotgun sequence.
ACCESSION   DASCNL010001006 DASCNL010000000
VERSION     DASCNL010001006.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5326)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5326)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002058456"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(137..844)
                     /locus_tag="QF359_13125"
     CDS             complement(137..844)
                     /locus_tag="QF359_13125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007674967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HJO87895.1"
                     /translation="MKNPNPFRYFKTSPEIIRLAVMMYVRFPLSLRNVEDLLHERGID
                     ICHETVRYWWNRFGPLFAKEIRKKRMHPISNHSNWKWHLDEVFVKINGETHYLWRAVD
                     HEGEVLESYVTKRRDRKAALIFLKKIMKRNGQPRAIVTDRLRSYRAAMKILGNESTQV
                     VGRWKNNRCENSHLPFRRREYAMLKFRRMRSLQKFVSIHASVFNHFNKERHLNSRVTY
                     KVQREAALVEWQQLCAV"
     gene            1014..1865
                     /locus_tag="QF359_13130"
     CDS             1014..1865
                     /locus_tag="QF359_13130"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJO87896.1"
                     /translation="MIMREFIVEADDGVNLSVVEKTTGSNSRHKILLVHGSGCGWEYW
                     DVPLNNYSIMDGLAKHGFAVYALECRGYGRSDRPDGRTITVARMAADVALVAHEICGT
                     DEKIGLVGHSSSGIVVLMAGAETSGIWSRLAVLNAPYRRINPQFEAYASQMIKAAETE
                     GNDTVPNGHHLEIETRLNEPEDKIIDWYKDLISVSYPRIPAAVFTDVVENPTIPLIPD
                     VHVPTLLINGSNEYVVDPADALDLLNDLGADDKGVVILPGSYHLPFLEKRGHRDLLDY
                     LKFWFSR"
     gene            1909..2922
                     /locus_tag="QF359_13135"
     CDS             1909..2922
                     /locus_tag="QF359_13135"
                     /inference="COORDINATES: protein motif:HMM:NF015445.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HJO87897.1"
                     /translation="MKKLVMLAIAFAMFGTWVAQAAAETTLRFNQWIPTKHFAVTKGH
                     VPWAEKVAKVTDGRVKIQFTTKSLGAPPRQFDLAVTGVADVVWGVTGYTAGRFVSAEI
                     SELPFSGKSGEALSVALWRTHQKFFAKANEYKGVKLLSLHNHSPGQISTNNKAITKLE
                     DLKNVKIRVPNFVTSEILKYYKGVPFRGPAPKSYEFYSKGIIDGSFMTNDGILSFKLA
                     KFAKYFIEVPNGLYNSTFFVAMNQAKWDAISSVDKKAIEGVSGESFARVIGGAWDAVD
                     QKGRELVRSGGTKVTTIQGAELAKLKSNLSFIKNNWLKKVAAKGIDGAGALKYLRAQA
                     AAY"
     gene            3024..3563
                     /locus_tag="QF359_13140"
     CDS             3024..3563
                     /locus_tag="QF359_13140"
                     /inference="COORDINATES: protein motif:HMM:NF016200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HJO87898.1"
                     /translation="MDNNISASPSKTVVERMFAWPARWLDLFLGITIFFMMAVTFFDV
                     IGRYFFSAPLPAADELTKLTMGVSIFAGLPLVTRAREHVTISLLDGLFSSPALRVRKV
                     VVDFICLGALGVLCWRLILQAQTLARFDDKTIFLGAPLTPFAYFMAVMTGVTVVVLLL
                     MLWRDLFGAPGATADNEEN"
     gene            3568..4860
                     /locus_tag="QF359_13145"
     CDS             3568..4860
                     /locus_tag="QF359_13145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HJO87899.1"
                     /translation="MLTAAIGLVILFVLLFGGVPIAFGMIIVGTVGFAYLSGLTPAMA
                     MVGQVAFDTVLNYEFSVLPLFILMGNFITRSRLSEELYTASYAFLGHRRGGLAMATIV
                     ACAGFSAVCGSSLATAATMSKVAMPSMRRFGYADSLAAGSIAAGGTLGILIPPSVILV
                     LYGIMTETEIGKLFAAGFLPGLLGMVLYMVSANLVSRFRPELGPPADRTEWPERMAAM
                     KGIWGILMLFMLVMGGIYLGVFSPTEAAGIGASGAFFFALARRTLNLRAIAEVLIETG
                     RTSTMVFIVLIGAIMFSNFVDVTRAPNHIQTFVENLQVAPIYIILIILAIYIVLGCVL
                     DSIAMMLLTVPIFYPLVAGLGYDLIWFGIIVVVVIEISLITPPIGLNVYVLRATLPDV
                     ALGTIFRGVTPFIVADIIRLALLVLLPGFVMLLPNLMD"
     gene            4877..5086
                     /locus_tag="QF359_13150"
     CDS             4877..5086
                     /locus_tag="QF359_13150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87900.1"
                     /translation="MHLTELPQDIKDRVIARQGKLHLYGDLDPAQTALIVIDMQNTFM
                     EPGAMAEVSRAREIVPNINHLALKI"
BASE COUNT         1240 a         1222 c         1354 g         1510 t
ORIGIN      
        1 cgttccccta atattagttc aatcgaatca attaatgaac atgttcatta tttctgatat
       61 agtctccatg tagctttcat gtaggtgctg tcagacgaat gcgaactagt ctctgtgtgt
      121 cgtaaataca gtggttttat acagcacaaa gttgctgcca ctcaacaaga gcagcttcac
      181 gttgaacctt atatgtaact cttgaattta aatggcgttc cttgttgaaa tgattgaaaa
      241 ctgaagcgtg gatcgaaacg aatttttgta aactccgcat ccgcctaaac ttcaacatag
      301 catattctcg tcgccgaaaa ggaaggtgag agttttcaca tctgttgttt ttccatcgcc
      361 ccactacttg agtagattcg ttgccgagaa ttttcatagc tgcgcgatat gaccgcaacc
      421 tgtctgttac gatggcgcgt ggctgaccat tgcgtttcat gattttcttg aggaaaatca
      481 acgctgcttt tcgatctcgg cgcttggtta cataggattc tagaacttcg ccctcatggt
      541 caacggcgcg ccaaagataa tgcgtctcgc cattgatttt gacgaagacc tcatctaggt
      601 gccatttcca atttgaatga ttggaaattg ggtgcatccg tttcttgcga atttctttag
      661 cgaagagtgg gccaaatcta ttccaccaat aacgaactgt ttcatggcaa atatctatgc
      721 ctcgttcatg gagcaggtct tccacattac gaagcgagag tggaaacctc acatacatca
      781 ttactgccag gcggatgatt tcgggtgatg ttttgaaata acggaaagga ttgggatttt
      841 tcatccaaga aggttacgga tttagcgcgt gaccgtcaaa accgatttta atctgacagc
      901 accggcggtt ttgttttatt gggtaaaagc cagtatttga gcgcctgctt tccctgttgc
      961 tgaacttcag ttagtctcga tttgtaactg gagaaaaggg gtgggccgtg accatgatta
     1021 tgcgcgaatt tattgtcgag gccgatgacg gtgttaattt atctgtcgtt gagaaaacaa
     1081 ccggcagcaa tagccggcat aaaatcctgc tggttcatgg ctcgggctgc ggctgggaat
     1141 attgggacgt gccgctcaac aattacagca ttatggacgg cttggccaag catggtttcg
     1201 cggtctatgc cctcgaatgc cgggggtatg ggcggagcga ccggcccgac ggcagaacaa
     1261 taacggtggc acgtatggcg gcagacgttg ccctggtcgc gcatgaaatc tgtggaacag
     1321 atgaaaagat cgggctggtc ggacattcct cgtcgggtat cgtggtacta atggcgggcg
     1381 ccgagacatc gggcatttgg tcacggcttg cagttttgaa tgcaccctat cggcgcatca
     1441 atcctcagtt tgaagcttac gccagccaaa tgattaaagc tgccgaaaca gagggcaacg
     1501 atactgttcc caatggccat catctggaga tcgaaacccg cttaaatgag cccgaagaca
     1561 aaattatcga ttggtataag gatctaattt cggtaagtta tccgagaata ccggcggcag
     1621 ttttcaccga cgtggtcgaa aatccgacaa tccccttgat tccagatgtc catgtgccta
     1681 cgcttttaat caatggatca aacgaatacg tcgtcgatcc cgctgatgct cttgatttgt
     1741 taaatgatct tggggccgac gataagggag tggttatttt accgggcagc tatcatttac
     1801 cttttttaga gaagcgcgga caccgtgacc tattggacta cctaaaattc tggttctcac
     1861 gttaatctct agacaaaact ataattttaa tcaacaagga ggaatcttat gaaaaaatta
     1921 gtaatgctag cgatcgcttt tgcgatgttt ggaacatggg tggcgcaagc tgccgccgaa
     1981 acgacgttga gatttaatca atggataccg actaaacatt ttgctgttac caaggggcac
     2041 gtaccttggg ccgaaaaagt tgcgaaagtg acggatggca gagtaaaaat tcagtttacg
     2101 accaaatctt taggtgcgcc gccccggcag tttgatcttg ctgtaaccgg cgtggccgat
     2161 gtcgtgtggg gtgtgacggg ctatacagct ggccgctttg tgagcgccga gatctctgaa
     2221 ttgccgttta gcggtaaaag cggcgaggca ctctcagtcg cattgtggcg tacacatcag
     2281 aaattctttg ccaaagccaa tgaatacaaa ggcgtcaaac tgttgtcact gcacaatcac
     2341 tcgcccggac agatttcaac taacaacaag gcgatcacca aacttgaaga tcttaaaaac
     2401 gtaaaaatca gagttcccaa ttttgtgact tcggaaattt tgaaatatta taaaggcgtg
     2461 cccttccgcg gcccggcacc gaaatcctat gagttttatt cgaaaggcat tatcgatggt
     2521 tcatttatga ccaatgatgg tattttgagt tttaaactcg ccaagtttgc caaatatttc
     2581 atcgaagtgc cgaatggact ctacaattcg accttttttg tggcgatgaa ccaagcaaaa
     2641 tgggatgcta tttcatctgt tgacaaaaaa gccatcgaag gtgtttccgg tgaatctttt
     2701 gcacgcgtca ttggtggcgc atgggatgca gtggaccaaa aagggcgcga gcttgttcgc
     2761 tcaggcggta ctaaagttac cactattcaa ggtgccgaac ttgccaagct taaatccaat
     2821 ctttccttca ttaaaaataa ttggcttaag aaagttgctg ccaaaggtat tgatggcgcc
     2881 ggtgcgctca aatatctgcg ggctcaggct gctgcctact agtaaataga cagccttact
     2941 taacagatgt gcagccgacg tcgagtttgt ggcgctggct gcacaatttt ttggatttca
     3001 ttgaataggt cagtaagtag ctagtggaca ataatatttc cgcatcacca tcaaaaacgg
     3061 tcgtcgaacg aatgttcgcc tggcccgctc gttggcttga tctattcttg ggcattacca
     3121 ttttttttat gatggcggtg acgtttttcg atgttatcgg ccggtatttt tttagcgcac
     3181 ctttgccggc cgccgatgag ctgaccaaat tgaccatggg agtctcaatc tttgccggat
     3241 tgccattggt tacacgagcc cgggaacatg tgacaatttc actgctggac ggtctgttct
     3301 ccagcccggc tttacgggtg cgtaaagtgg tcgttgattt tatctgcctc ggcgcactcg
     3361 gcgtcctttg ctggcgattg atcttgcagg cccaaactct ggcgcgtttt gacgacaaaa
     3421 cgatcttttt gggcgcgccg ctcacgccgt tcgcttattt tatggccgtc atgacaggtg
     3481 tcacggtggt cgtcctcttg ttgatgctgt ggcgcgacct attcggggcc ccgggcgcca
     3541 cggcggataa cgaggaaaat tgaaaacatg ctgactgccg ccatcggatt agtgatttta
     3601 tttgtgttgc tgtttggtgg cgtgcccatc gccttcggca tgattatcgt cggcacggtc
     3661 ggttttgcct atctatctgg tctgacgccg gccatggcca tggtgggtca ggtggcattt
     3721 gatacggtcc tcaattatga attttccgtc ttgccgctgt ttattttgat ggggaatttt
     3781 atcacgcgct cgcgtttgtc agaggaactc tacaccgcgt cctatgcctt tctcggtcat
     3841 cggcgaggtg gcctggcgat ggcgacaatc gtcgcctgtg ctggttttag tgcggtctgc
     3901 ggttcgagct tggcgacggc agcgacgatg agcaaggttg ccatgccgtc gatgcggcgc
     3961 ttcggctatg cagatagtct ggccgctggt tcaatcgctg ccggcggcac gctcggtatt
     4021 ctcatcccgc ccagtgtgat tttagtgctt tacggcatca tgaccgaaac cgagatcggc
     4081 aagttgtttg ccgccggatt cttgccgggc ttattaggca tggtccttta tatggtcagc
     4141 gcaaatttgg tgagccggtt tcgccctgaa ctgggaccgc cggctgatcg gacggaatgg
     4201 cccgaacgca tggccgccat gaagggaatc tggggcatat taatgctgtt catgctggtt
     4261 atggggggta tttatttagg cgtattttca cctaccgagg cggctgggat cggtgcttcg
     4321 ggcgcttttt tcttcgccct tgcccggcgc actttaaatc tccgcgctat tgccgaagtg
     4381 ctgatcgaaa ccgggcgcac ctcgaccatg gtctttattg tcctgattgg cgccatcatg
     4441 ttttctaatt tcgtcgatgt cacccgtgcg ccgaaccata tccagacctt tgtcgaaaat
     4501 ctccaagtcg cgccgatcta tattattctg attatcttgg cgatctatat tgtacttggc
     4561 tgcgtgctgg atagcatcgc catgatgctg ctgacggtgc cgattttcta tcctttggtg
     4621 gccgggctcg gctatgatct gatctggttt ggtattatcg ttgtcgtcgt tattgagatc
     4681 agtttaatca ccccgccgat tggcttgaac gtgtatgtgc tcagggcaac cctgcctgat
     4741 gtggcgctcg gaaccatctt taggggcgtc acgccattta ttgttgctga tatcattcgt
     4801 ctggctttat tggttctgct gccgggcttt gttatgctgt taccgaattt gatggattaa
     4861 aaaccgggga atagatatgc atctaaccga attaccacaa gatattaagg accgggtgat
     4921 cgctcgccag ggtaaactcc atctttatgg ggatctcgat ccggcgcaaa cggcgctgat
     4981 tgtgatcgat atgcagaata ccttcatgga gccgggcgcc atggcggaag tgtcgcgggc
     5041 gcgtgaaatt gtgccgaaca ttaatcacct ggccctcaaa atctaattag aaattcacca
     5101 ccatctttgg tgagttatga aatggaccaa atccagccca cacaacagtt atggccctac
     5161 aatcaaatgg gtctaattaa tgtaggagct tgcttgttgc atgcccccgc aaccaacaaa
     5221 ttaactatta atattaatat gttacgaaaa atatagccgc tccatttggg gcggctattt
     5281 taatttatgt aaataattgc cacttttttc attgctaggg gcgtgg
//
LOCUS       DASCNL010001007         1560 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002059839, whole genome shotgun sequence.
ACCESSION   DASCNL010001007 DASCNL010000000
VERSION     DASCNL010001007.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002059839"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..854)
                     /locus_tag="QF359_13155"
     CDS             complement(<1..854)
                     /locus_tag="QF359_13155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HJO87901.1"
                     /translation="MKHVFLIDGSGFLFRAFFGIKAQMNRPDGTPTNAVYGFTQMLLK
                     LVDDTDADHIAVIFDRARKTFRSDIYKEYKAHRPPPPDDLIPQFELVREATRAMNIPA
                     IDMEGYEADDLIATYAKQAVAAGADVTVVSTDKDLMQVVGPKIKMFDAMKNREIGLEQ
                     VVEKFGVKPDRVIDVQALAGDSSDNVPGVAGIGVKTAALLIEEYGDLDEVLANAEKIK
                     QPKRREALIEQADLARISRELVTLKDDVPVEVPLKDFAVKEIEPDILLGFLQEQAFKS
                     LVTRLESK"
     gene            complement(883..1071)
                     /locus_tag="QF359_13160"
     CDS             complement(883..1071)
                     /locus_tag="QF359_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HJO87902.1"
                     /translation="MDSTEIEQPIIVKTSAVNCDGGGGAAGHPNVYLNMGSEGHVVCP
                     YCSRSFVLAEGSIGGTGH"
     gene            1200..>1560
                     /locus_tag="QF359_13165"
     CDS             1200..>1560
                     /locus_tag="QF359_13165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO87903.1"
                     /translation="MTPSLPEFAIEISGLNKTYAGNSIQPPQEALININLKIPRSAFF
                     GLLGPNGAGKSTIINIMAGLVIKSSGDVKVWNYDIEKEMRQARSSIGIVPQELNIDPF
                     FTPREVLETQAGLYGVPK"
BASE COUNT          410 a          421 c          337 g          392 t
ORIGIN      
        1 aatttacttt ccagccgtgt caccagggat ttaaaagctt gttcctgaag aaaacctaac
       61 aatatgtccg gctcaatttc tttgacggca aagtctttga gcggaacttc caccggcaca
      121 tcatctttga gcgtcaccaa ttcccgagaa atgcgggcga ggtcggcttg ttcgatcaag
      181 gcttcccggc gtttcggctg cttgattttt tccgcattgg cgagcacttc gtcaagatca
      241 ccatattcct cgatcaacaa agcagcagtt ttaacaccaa tgccggcaac gcccggtaca
      301 ttgtcagagc tatcaccagc cagcgcctgc acatcaatca cccggtccgg cttgacgcca
      361 aatttttcga ccacctgctc aagcccaatc tcacgatttt tcatcgcatc aaacatttta
      421 atcttcggtc caacgacctg cattaaatct ttgtcggttg aaacgaccgt gacgtcagca
      481 ccagcggcaa cagcctgttt ggcataggtt gcgatcagat catccgcctc atacccctcc
      541 atatcaattg ctgggatatt catcgcccgg gtggcttccc ggaccagctc aaactgcgga
      601 atgagatcgt ctggcggcgg cggccggtgg gctttatatt ctttatagat atcgctgcgg
      661 aaagttttgc gcgcgcggtc aaaaatcacc gcaatatgat cggcatcggt gtcatcgacc
      721 agcttcaaca acatttgggt aaaaccatag acagcatttg tcggcgtgcc atcgggacgg
      781 ttcatttgtg ctttgatgcc aaaaaaggca cgaaataaaa agcccgatcc atcgatcagg
      841 aaaacgtgtt tcatctcttt cgaattggcc accatgaatt agctagtgac ccgttccacc
      901 gattgagcct tcagcaagaa caaagctgcg gctgcaatag ggacacacca catgaccttc
      961 actgcccata ttcaaataca catttggatg gcctgcagca cccccaccac catcacagtt
     1021 taccgcagaa gttttgacga taatcggttg ttcaatttcg gtgctatcca tttttattca
     1081 ctctttttga aagtcttgca cggtcactca ggcaatacca gatcatcatt gaccatagtc
     1141 tatgcgaatg ataccgaatg acgccctaca atcaagcttt ggcaggatta atacgaccca
     1201 tgacacccag cctaccagaa ttcgccatcg agattagtgg tctcaataaa acctatgcag
     1261 gcaattcaat tcagccgccc caagaagcgc taatcaatat aaatttgaag attccgcgca
     1321 gcgccttttt tggcttgtta ggacccaacg gcgccggtaa atcgaccatc ataaatatta
     1381 tggctggtct ggttatcaaa agctccggtg atgtcaaagt gtggaactac gatatcgaaa
     1441 aggagatgag gcaagcacgc tcgtcgatcg gaattgtgcc tcaagagcta aacatcgatc
     1501 cgttttttac cccgcgcgaa gtcctggaaa ctcaagcggg tctctatggc gtgcccaaat
//
LOCUS       DASCNL010001008         5943 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002062075, whole genome shotgun sequence.
ACCESSION   DASCNL010001008 DASCNL010000000
VERSION     DASCNL010001008.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5943)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5943)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5943
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002062075"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..477)
                     /locus_tag="QF359_13170"
     CDS             complement(1..477)
                     /locus_tag="QF359_13170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO87904.1"
                     /translation="MKKHHVSTTINGDEVDFLCETSETLLDVLRDHLHLTGAKEGCGT
                     GDCGACSVTLDGVLVCSCLVLGVEAEGKEIETIEGMADGDELHPLQRKFVEHIALQCG
                     ICTPGLLISARSLLEKNPNPTEEEVRFGLAGNLCRCTGYQNIIEAVMDAAQEMRGA"
     gene            complement(477..1352)
                     /locus_tag="QF359_13175"
     CDS             complement(477..1352)
                     /locus_tag="QF359_13175"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HJO87905.1"
                     /translation="MTEMKYEVPTSLDDAVALLADGKGNAKVLAGGTDVLVQMHMDLI
                     EPDLIVDIKNISELREITKEKDGYRFGAAVSGVELMDHEDFCQTWPGIMDGVSLIGSL
                     QVKGRASVGGNVCNASPAADSVPAMIAAGATATIVGPKGKRDIPVEEIATGPGQTSLE
                     DGEIVVSFFLPNAAPGTGGAYQRFTPRTEMDIAVVGVGISLTLGDDGVCSSAKVALGA
                     VAATALIAEAAAAALVGTKVDKAALDNLAAAVSAACKPIDDKRGTKEYRIKVAGVLAR
                     RVALIALERALGGKE"
     gene            1579..2100
                     /locus_tag="QF359_13180"
     CDS             1579..2100
                     /locus_tag="QF359_13180"
                     /inference="COORDINATES: protein motif:HMM:NF022115.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2478 domain-containing protein"
                     /protein_id="HJO87906.1"
                     /translation="MDANFAAVVYTPKQTDKSALPDFVKGLKASGVSVAGILQESSVQ
                     SGDTMRTIESVDISTGHRIPIKKPMKNEEDCGLDVSSLTETSAVLRNVLTTDSNSVPD
                     LVVVEKFGDQEQIGEGLLDEIMQIIAEGIPLLISVPEPALEIWQELSGNMGSVIDFET
                     DALQKWWHEIAAT"
     gene            2222..3061
                     /locus_tag="QF359_13185"
     CDS             2222..3061
                     /locus_tag="QF359_13185"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HJO87907.1"
                     /translation="MKIHKPTTLQEAAGLLAADDGAQCIAGGATLVAMMNSGVVEPSA
                     LISLEYITGLNEITKSSDGSVIIGASAKHKTVAAYVDFSEAQNIVGIAADKIAHPPIR
                     NMGTIGGSVVVGDPAADYPTALLAAEATINIVGQDSSRSISAEDFFDGFLSTALEEDE
                     LVQSIQIPAGPENAVAVYDKIAKIAGDIAILSVAVVIASSGDSCDYVRIAVGGCGPTP
                     YRVPEAEAKYIDGDLDAAIELLVAASDPMSDVRGSAEYRRKVLPRVLRRALTTAQQMG
                     GRE"
     gene            3061..3546
                     /locus_tag="QF359_13190"
     CDS             3061..3546
                     /locus_tag="QF359_13190"
                     /inference="COORDINATES: protein motif:HMM:NF013923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJO87908.1"
                     /translation="MNNTLTYDLKINGEIETVTAPAQETLLTVLRERLHLTGAKRGCD
                     QGVCGTCTVLINGEPMRGCLTIAALCEGAEITTIEGLATPEALDVVQQSFVDTGGIQC
                     GFCSSGMILTVSSILKNNPKASETEIREGISGNICRCTGYEKIIDAAVLAAQQINGAG
                     R"
     gene            3543..5870
                     /locus_tag="QF359_13195"
     CDS             3543..5870
                     /locus_tag="QF359_13195"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HJO87909.1"
                     /translation="MTEVLDTVGKRVTRLEGKDKASGRAQYTDDMTLPGMLYGAIAVS
                     PHAHANILSYNISAALEVPGVKAVITGDDYNWFRSGGHVKDETLLAKGKVRYIGEPVA
                     AVAARTQKAAEEAALLIQVEYEELVAVLSIDDAMNPDLPIIHEEFSTYQMKVTDLDVS
                     GNECWVTSAEEGDIDSAWAECDAVVEETFETQAQHHLYLEPASALADVDANGKVTVWG
                     PNQGVHFIQTRTADYLGLPLTKVRAISPTVGGGFGGRAGPHMQPIAAALALKSGKPVK
                     ITLSRAMDFETCRSRHPSRVRMKIGAKKDGTFVAQEAELLFDGGSFMDETPAVASFGL
                     MMARGPYRIPNFRGSARAFYTNKLRAGSFRGFGNPQTTIARECLIDRLAQTLELSPME
                     VRQKNAMVAGDKWLGGQEVPACGFAQCLEEVEKAAELDKAQLPPPALGKKRGFGFSGF
                     AHISSFLASGAAVQLREDGTITMNTGGIEIGQGASTILAQICAEALKLPIESINVTEP
                     DTDTTPYNYKSVGSRTTYTTGRAVKAAAEDVADQIIEHAAAMLDCDPAQLTLISGGQV
                     GVKSDVSDSPLVNRTITFKEASLRAHYGVGGPIIGTHTFVFDGPPFDREGSKMKAVVF
                     GNMGAYIYGVQGAAVDVDEITGQVEVVKAWAAADVGKAINPTNIEGQIQGGFAQGVGY
                     ALYEEMVWDNGRLVNPTLMEYKVPGVKEVPKVHTIIVEDPEPAGPYGAKGVGEPAMVG
                     VAPAIANAIDDAIGGRPNSLPMTPEKVLDVLDPSS"
BASE COUNT         1449 a         1564 c         1533 g         1397 t
ORIGIN      
        1 ctaggctcct ctcatttctt gggcggcgtc catgacggcc tcaataatat tttgatagcc
       61 ggtgcagcgg caaagattac ctgccagccc aaagcgcacc tcttcttcgg tcggatttgg
      121 atttttctcc aatagactac gcgccgagat cagcaaacct ggtgtacaaa taccgcactg
      181 caaggcgata tgttcaacga atttacgttg caacgggtgc agttcatcgc catcggccat
      241 gccttcaatg gtttcgattt ctttaccttc agcttcaacg ccgagcacta ggcaggagca
      301 aaccagcacg ccatcaaggg tgacactaca ggcgccgcaa tcaccagttc cgcagccttc
      361 cttagcgccg gttaaatgca gatgatcccg caagacatcc agcaaggtct cactggtctc
      421 gcagagaaaa tcaacttcgt cgccgttaat cgtcgtactt acatgatgtt ttttcattat
      481 tcctttcctc ccagggcgcg ttcgagagca atcaaggcca cccggcgagc cagtacaccg
      541 gcaactttaa tgcgatattc cttggtaccg cgtttatcat caattggttt acaagccgca
      601 cttacggctg ccgccagatt atccagagcc gccttatcaa ctttggtacc aaccaaagca
      661 gcggcggctg cttcggctat caaagcggta gctgccactg cccccaatgc cactttggca
      721 gatgaacaga caccatcgtc accgagcgtc aagctgatac ctacaccaac gacggcaata
      781 tccatctcgg tgcggggggt gaaacgttga taggcgccgc ctgttccagg agctgcattt
      841 ggtagaaaga aggaaacaac aatttcaccg tcttcaagcg aggtttgacc cgggccggtg
      901 gcgatctctt caaccgggat gtcgcgcttg cccttgggcc cgacaatagt tgccgtcgca
      961 ccggcagcaa tcatcgccgg cacgctatca gcagctggcg atgcattaca gacattaccg
     1021 ccgaccgagg ccctgccctt gacctggagc gagccgatca gactgacccc atccatgatg
     1081 cccggccagg tttggcagaa atcctcatgg tccatcagtt caactccgga gacagccgca
     1141 ccaaaacgat agccgtcctt ttctttggta atctcacgaa gctcagaaat atttttaata
     1201 tcaacgatca gatcgggctc aatcagatcc atatgcatct ggaccagcac atcggtcccg
     1261 cccgccagta ctttagcatt acctttacca tccgccagca gcgccacagc atcatccaac
     1321 gatgtcggca cctcatattt catttcggtc attttattct tcaccctccc aaatatcggc
     1381 gatttatata ttcatttttc tctcggctta ctatcggcaa aaattttctc agcgtcaaac
     1441 ttagtgtgaa agttaatcta gtcagtagag aaaaatttaa atggggctgt gccacttatt
     1501 taaagacaaa tgacttaggt taatgtcagt atgtcgattg gccgttaaaa acaccgctaa
     1561 atgagaaaaa ttgatcaaat ggacgcgaat tttgccgctg tggtttatac accgaagcaa
     1621 accgacaaat ccgccttgcc cgacttcgtc aaaggattga aggcgagcgg cgtttcggtt
     1681 gccggtatct tgcaggagag cagtgttcaa tccggcgaca ccatgcgcac gattgaatct
     1741 gtcgacatct ctaccggcca tcgcatccca atcaaaaagc cgatgaaaaa tgaagaagat
     1801 tgcggcctgg atgtgtctag tcttaccgag acttcggcgg tgctacgcaa tgttctcacc
     1861 actgactcta actccgtacc agatctggtt gtggttgaaa aatttggtga ccaggaacaa
     1921 atcggcgaag gcctactgga tgaaattatg cagatcattg ctgaaggcat accactcttg
     1981 atatctgtgc cggaaccggc gttggaaatt tggcaggaac tcagcggaaa tatgggtagc
     2041 gtgatcgact ttgaaaccga tgccctgcaa aaatggtggc atgaaatagc ggcaacgtag
     2101 aattgccatg ttgacttaaa ggccttccaa gctaccattt gtttagttcg caaatcgctg
     2161 tttcaaatat aaaacacctg cccatttaag ctgtggcaat aatcaggaag gtcccatctg
     2221 aatgaaaatt cataaaccca ccactttgca ggaagccgca ggattgttgg ctgctgatga
     2281 cggcgcgcaa tgtattgccg gaggtgcgac tttggtggcg atgatgaaca gcggcgtcgt
     2341 tgagccttca gctttaattt ccctcgaata tattaccggc ttaaacgaaa tcactaaatc
     2401 ctctgacggt tcggtaatta tcggcgcgtc agcaaaacat aaaactgtcg cggcctatgt
     2461 agatttttca gaggcgcaaa acattgtcgg cattgctgcc gataaaattg ctcacccgcc
     2521 gattagaaat atgggcacca ttggtggctc ggttgttgtc ggcgatccgg cggctgacta
     2581 tcccactgcc ctgttggccg ccgaggcaac catcaacatc gtcggtcaag atagctcccg
     2641 ctcaatttcc gctgaagatt tcttcgatgg atttttatcg acagctcttg aagaggacga
     2701 gctggtgcaa tcaattcaaa tacctgccgg gccggagaat gctgttgcag tctatgataa
     2761 gattgccaag atcgccggtg atattgccat cctatcagtc gccgtggtga tagcatcttc
     2821 cggtgatagc tgtgattatg tcagaatcgc cgttggcggt tgtgggccaa ctccctatcg
     2881 ggtgccggaa gcggaagcaa aatatatcga tggagatttg gacgcagcga ttgagttgct
     2941 ggtcgccgcc agcgatccaa tgagcgacgt tcgcggcagc gccgaatacc gccgcaaagt
     3001 attgcctcgc gtcttgcgcc gggcgcttac cacagcgcaa caaatgggag gccgcgaata
     3061 atgaacaaca ctttaactta tgatcttaaa atcaatggcg agatcgaaac tgtcaccgcg
     3121 ccggcccaag aaaccctgct gaccgtgctg cgtgagcggc tgcatttaac cggtgccaag
     3181 cggggctgtg atcaaggcgt ctgcggcacc tgcacggttt tgatcaatgg cgagccaatg
     3241 cggggctgtc tgaccatagc cgcactctgc gaaggtgctg aaataaccac catcgaaggc
     3301 ttggcaacac cggaagcctt ggacgttgtg cagcaatcct ttgttgatac cggtggtatt
     3361 caatgcggct tttgttcctc aggtatgatc ctgactgtca gttcaatcct aaaaaacaat
     3421 ccaaaagcca gtgaaaccga gatacgtgaa ggtatttcag gcaacatctg ccgttgtact
     3481 ggatatgaaa aaattatcga cgccgccgtt ctagcagcac aacaaatcaa tggagcgggg
     3541 cgatgaccga agtcttagac acagttggca aacgcgtcac caggcttgaa ggtaaagaca
     3601 aagccagcgg ccgcgcgcaa tataccgatg acatgacttt gcccggtatg ctctatggcg
     3661 cgattgccgt cagcccgcac gcccatgcta atattctctc ttataatatt tcagcggcgc
     3721 ttgaagtgcc aggcgttaaa gccgtgataa ccggtgatga ttataactgg tttcgaagcg
     3781 gtggccacgt caaagacgaa actttgctgg ccaaaggcaa agtccgctat atcggtgaac
     3841 cggttgctgc cgttgccgcg cgcacacaaa aagctgctga agaagcggct ctcttgatcc
     3901 aagtcgaata cgaggagctt gtggctgtgt tgtctatcga tgatgcgatg aatcccgatc
     3961 tgccgatcat ccacgaagag ttttccactt atcaaatgaa ggtaacagat ttggacgtca
     4021 gcggtaatga atgctgggtg acgtctgctg aagaaggcga tatcgatagc gcctgggcgg
     4081 aatgtgatgc agtggtcgaa gaaacgttcg agacccaggc tcagcatcat ctctatttag
     4141 agccagcttc tgctctcgcc gatgtcgatg ccaatggcaa ggttaccgtt tggggaccga
     4201 accagggcgt tcatttcatc caaacccgca cggctgatta ccttggtcta ccgctgacta
     4261 aagtgcgggc gatttcaccg acggttggcg gtggctttgg tggccgggcc gggccacata
     4321 tgcagccgat tgccgcagca ctggcgctca aatccggcaa gccggttaaa atcacgcttt
     4381 cccgggcaat ggattttgaa acctgccggt cgcgtcatcc atcacgcgtg cgcatgaaaa
     4441 ttggcgctaa gaaagacggc acgtttgtcg cgcaggaagc tgaattgctg tttgatggcg
     4501 gctcctttat ggacgagacc ccggcggttg cgagcttcgg tctgatgatg gccagagggc
     4561 cctaccggat tcctaatttt cgtggttcgg cccgggcttt ttataccaac aaactccgcg
     4621 ctggctcgtt ccgcggcttt ggcaatccac agaccaccat cgcccgcgaa tgtttgattg
     4681 accgcctcgc tcaaacgctt gagctgtcac cgatggaagt gcgtcaaaag aacgccatgg
     4741 tagccggcga taaatggctg ggcggccagg aagttccggc ctgcggcttt gctcaatgcc
     4801 tggaagaagt tgaaaaggcg gctgaactcg ataaagctca attgccgcca ccggcactcg
     4861 gcaagaaacg cggcttcggc ttttccggct ttgctcatat cagcagtttt ttggccagcg
     4921 gtgccgcggt gcaactgcgt gaagacggca cgattacgat gaataccggc ggcattgaaa
     4981 tcggccaagg cgccagcaca atcttggctc aaatctgtgc ggaagcactc aaactgccca
     5041 tcgaatccat taatgtgacc gagcctgata ccgacacaac gccgtacaat tataagtcgg
     5101 ttggcagccg caccacttac accaccggcc gggcggtaaa agccgccgcc gaagatgttg
     5161 ccgatcagat cattgaacat gcagcggcta tgctcgattg tgatcctgcg cagctgacgt
     5221 tgatttcagg tggccaagtc ggcgttaaat cagacgtttc cgacagtcca ctagtcaatc
     5281 gtactatcac ttttaaagag gcatctttac gtgcgcatta cggcgttggt gggccgatca
     5341 tcggcaccca cactttcgtc ttcgatggcc ctcctttcga ccgcgagggc tctaagatga
     5401 aagccgtcgt gttcggcaat atgggggcct atatttatgg tgtccaaggg gccgcggttg
     5461 atgttgatga aatcactggc caggttgaag tggtcaaggc ctgggccgcc gccgatgttg
     5521 gcaaggcaat caatcccacc aatattgaag gtcaaatcca aggcggtttc gcccaaggcg
     5581 tgggctatgc gctctatgaa gaaatggtct gggacaatgg ccggctggtg aacccaactt
     5641 tgatggaata caaagttccc ggcgtcaaag aggtgcctaa ggttcacact attatcgttg
     5701 aagacccgga accagctgga ccttacggcg ccaaaggtgt tggtgaaccg gccatggtcg
     5761 gcgttgcgcc cgcaattgcc aatgcgattg atgatgccat tggcgggcgg cctaattctt
     5821 tgccgatgac gcccgaaaaa gtcttggatg tgcttgatcc ctccagctag tcaaaactag
     5881 aggcgcttga tttcaccgaa gcgggattcc agattttcga ctcgatcact acttggcgtt
     5941 ttg
//
LOCUS       DASCNL010001009         4016 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002064141, whole genome shotgun sequence.
ACCESSION   DASCNL010001009 DASCNL010000000
VERSION     DASCNL010001009.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4016)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4016)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4016
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002064141"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            475..2229
                     /locus_tag="QF359_13200"
     CDS             475..2229
                     /locus_tag="QF359_13200"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HJO87910.1"
                     /translation="MQISIQKSKGQTFVQFKLADVISVFALMLISFVTIDTLQAQGFS
                     QDQRRVIIQSLSDEERQKFFGMSREDKQKFFQERAKKSGGSGGQSAIRPGGGPGGPEG
                     RRRGRPPTLVELGDVIREPLVQTFLITGRFVASQKSAIAARIKGSVRKILVQIGDRVK
                     AGQILAELDADRLKLEADLRSADVLAARAKWKTARAQVGLVSQELKRLERLRKSAAFS
                     QARFEDKKQEVVKAKSAVDETAAALKRARAQRDLARIDLKDATIRAPYPGAILVRHVS
                     PGAYISAGSPIVTLMDDESLEIEADVPSIRLSGVPEGRVIDIQLDNNTKIKAAVRAII
                     PDENPLARTRAVRLVPDLSSTKSKLVANQSAVLEVLQGDTHTVIAVPKDAIVNRQSGK
                     IVYVFQNGTVRPSNVDIGESFSGKFEVLSGLRPGQKVVVKGNELLRPGQRVRVKRSGG
                     PPGGFSGGGPSASRSGGRPGGQQGGQSSGPGGNSNRRALIQSLSPEERQKFFAMNQEE
                     KRAFFQSRSKATSGGGAAASSPQRSGGNRGGAGGSLPREKRRAIIQSLSPEERQKFFS
                     MSPEEKQKFFRVKAGSAS"
     gene            2229..>4016
                     /locus_tag="QF359_13205"
     CDS             2229..>4016
                     /locus_tag="QF359_13205"
                     /inference="COORDINATES: protein motif:HMM:NF013069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HJO87911.1"
                     /translation="MSLIELAIKRPVAVLSVVMMIVLMGFVALKFIPIQLTPDLRKPV
                     VAIFTPWPGASPTEVEREITTRQEEALTGLDGLEEIASSSRDGLSRIRLEFSIDTNLD
                     RALMLIGNALTNISGIPDEAKQPRIRTRDSEDNPIAWFVINKLPDNKKDIQTYGAFLE
                     DFLADRLERIPGIALANVFGGKRRELQIVVDPQKLARFRLAVPDVITAMRNANASVSA
                     GVVEEGKRRYIVRTDNELFNEERIENLIVRTQVDQSTGRIARVRVSDVAKVSFSFKKA
                     HTYILNNGNKSIVSNVVRDTGVNVIKVMENVRAAVKELNEGALRQAGLVLRQVHDDTV
                     YINSAIDLVQQNILVGGLLAALILMLFLRSIRATVIISLAIPVSVVGSFVAMAALGRS
                     INVISMAGIAFAVGMVVDAAIVVLENIFRLRQQGNSPFEAALYGAKQVWGAVFVSALT
                     TVMVFVPILVMKLEVGQLFRDIAVAISVAVLLSLIISITVIPALSNKMLAGPVKDFSQ
                     ALRLPVIDHFARFFYRFALGYARRVVDSKKLALATIIVICGVTGVATWAFLPKLEYLP
                     EGNRNLIIARIATPPGYNLDAVREIAANTF"
BASE COUNT         1017 a          993 c         1017 g          989 t
ORIGIN      
        1 aaaaaatggg aaacaatgta gtgatttctc atctcaaact actttaagcg tatcgtgatc
       61 atgggtttaa tagtcttcgg cttgtcagta ttaataatta ctattgccta tgcccagaaa
      121 aaattggttt tcgtaacccc gccaatacca ctgataccgc caccagagaa gtgattaccc
      181 gccgggctga caagagaatc ggatcgacgt gaagattaag aaatttcctg gtgagcgggc
      241 gctacgcctc gccaacagta gcaaagtaga cggtgaagtt ctattctttc aatcaacgat
      301 tacgggcttt ctattataga atttaattta aaatagataa aaaatagcgt cggaattatg
      361 taattcatac gttatacccc aatactgggg tataatatta ccgaagccaa cgtaatgatg
      421 ggaaatgtat ctgggtataa ttgttcccgg aagtggtggg gagactttat taaaatgcaa
      481 atttcaatac aaaaatccaa aggccaaacc tttgtccaat tcaaactggc agacgtgatc
      541 agcgtatttg ctttgatgct tatcagtttt gtgacaattg acacactgca agcacaagga
      601 ttcagccagg atcaacgccg cgtaattatt caaagtctct cggatgaaga acggcaaaaa
      661 ttctttggca tgagccggga agacaagcaa aaatttttcc aggaaagagc caaaaaatca
      721 ggcggatcag gtggtcaatc tgccatccgc cccggcggtg gtccgggagg cccagaaggc
      781 agacgtcgtg gccgcccgcc aaccttggtc gagcttggcg atgtcattcg cgagccgttg
      841 gtccaaactt tcctcattac cggtcgtttc gtggccagtc aaaaaagtgc tattgccgcg
      901 cgcatcaaag gcagtgttcg gaaaattctg gtccaaatcg gagaccgtgt caaagccggt
      961 cagatcttag cggaactgga tgctgaccgc ctcaaattag aggctgacct ccgcagtgca
     1021 gatgttttag ctgcacgggc aaagtggaaa acggcgcggg cccaagttgg cctcgttagt
     1081 caagaactca aacgcctgga acgtctacgc aaatctgctg ctttcagtca ggctcggttt
     1141 gaagataaaa aacaagaggt tgtaaaagct aagtcggcag tcgatgagac ggcggcggca
     1201 ctgaagcgtg cccgcgccca gcgcgacctc gcccggatcg atttgaaaga tgccaccatc
     1261 cgtgcgcctt atcctggtgc gattttggtg cgtcatgttt cacctggtgc ttatattagc
     1321 gccggctctc caattgtaac cctgatggat gacgaatctt tggaaatcga agcagatgtg
     1381 ccgtcgatcc gcttgtccgg tgtgccggaa ggccgtgtta tcgatatcca gcttgataac
     1441 aacaccaaga ttaaagctgc tgttcgcgcc atcatcccgg atgaaaaccc cctagcccgc
     1501 acgcgggcgg tccgcttagt gccggattta tccagcacca aatccaaact tgtcgccaat
     1561 caaagtgctg tcctggaagt actgcaaggc gatacccaca ctgttatcgc cgtgccgaaa
     1621 gacgccatag ttaaccgtca atcaggcaaa atcgtttatg ttttccaaaa tggtacagta
     1681 cgaccctcca atgttgatat cggcgaatcc tttagcggca aattcgaagt actgtctggt
     1741 ctcagaccag gccaaaaagt ggtcgttaaa ggcaacgagc tattgcgccc aggccaacgg
     1801 gttcgcgtca aaagatccgg cggtcctccc ggtggttttt ctggtggcgg accaagtgcc
     1861 agtcgatccg gggggcgccc aggtggccag caaggcggcc aatccagtgg gccgggcggg
     1921 aattccaatc gacgcgccct cattcaaagc ttaagtccgg aagagcgcca aaaattcttc
     1981 gctatgaacc aggaagaaaa acgtgccttt ttccagtcac gaagtaaagc aacgagtggt
     2041 ggtggcgctg ctgccagttc acctcaacgc agtggcggca atcgcggtgg tgcaggtggt
     2101 agtttgcctc gcgaaaaacg ccgcgccatt atccaaagtc tgagccctga agaacggcag
     2161 aaattctttt cgatgagccc ggaagaaaaa cagaaatttt tccgtgtgaa agctgggagt
     2221 gcttcctaat gtctttgatc gaacttgcca ttaagcgacc agtcgctgtt ttgtcggtcg
     2281 tcatgatgat cgtcctgatg gggtttgttg ctctgaaatt tatcccgatt caattaacgc
     2341 cagatttacg taaaccggtg gtggcgatct ttaccccttg gccgggagct tcaccaaccg
     2401 aagtggaacg tgaaattacg acgcgccagg aagaagctct gaccgggctc gatggtttgg
     2461 aagaaattgc cagctccagc cgtgacggct tgtcgcgcat ccgtcttgag ttctcaatcg
     2521 ataccaattt ggatagagca ctgatgttaa ttggcaacgc cttaaccaat atttccggaa
     2581 ttccggacga agccaaacag ccgcgtatcc gcacccgtga ttccgaagat aaccctattg
     2641 cctggtttgt catcaataaa cttccggaca ataagaaaga tattcagacg tacggcgcgt
     2701 tccttgaaga ttttctggcc gaccggctcg aacgtattcc cggcattgca ctggcgaatg
     2761 tttttggtgg caaacgccgc gagcttcaga tcgttgtaga cccgcaaaaa ctggcgcgtt
     2821 tcagattagc cgtaccagat gtcataaccg ccatgcgtaa cgctaacgcg tcggtatcag
     2881 ccggtgtcgt tgaggaaggt aaacgtcgct acattgtccg taccgataat gaactgttca
     2941 acgaagaacg cattgaaaat ctaattgtca gaacgcaggt tgaccaaagt accggccgca
     3001 tcgcccgggt acgggtttcg gatgtcgcga aagttagttt tagtttcaag aaagcccata
     3061 cttacatcct caacaatggc aacaaatcta ttgtctccaa tgttgttcgt gatactggcg
     3121 ttaatgtcat caaagtgatg gaaaacgtaa gggcagccgt caaagagctc aatgaaggcg
     3181 ccctccggca agccggcctc gtactgcggc aagtccatga cgataccgtt tatatcaact
     3241 cggctatcga cctggtgcag caaaacatct tggttggtgg attgctggca gccctcattt
     3301 taatgctgtt cctacgctca atcagggcga cagttattat ctctctggca atccccgtgt
     3361 ccgtggtcgg ctcgttcgtc gctatggcgg cactcggtcg gtcgatcaat gtgatttcaa
     3421 tggcaggtat cgcgtttgcg gttggcatgg tggttgacgc tgctatcgtc gtgctcgaaa
     3481 acatattccg attaagacaa cagggaaatt caccttttga agcggcactt tatggagcca
     3541 aacaggtttg gggtgccgtc tttgtgtcag ccctcacgac agtaatggta tttgttccaa
     3601 ttttggtgat gaaacttgaa gtcggccagc tgttccgcga tatcgctgtc gccatatccg
     3661 tcgccgtatt gttgtcactg atcatctcaa tcaccgtgat accggcactt tcgaataaaa
     3721 tgcttgccgg accggtaaag gatttttccc aagccctcag gttacccgtg atcgatcatt
     3781 tcgcccgatt tttttaccgt tttgcccttg gctatgcgcg ccgcgtagtt gacagcaaaa
     3841 aactcgcgct tgccactatt attgtgattt gcggtgtaac gggggtcgcc acttgggcat
     3901 tcctgccgaa gcttgaatac ctgccggaag gcaaccgtaa tcttattatc gcgcgaattg
     3961 cgacaccgcc cggctacaat ctggatgcag tgcgcgaaat tgcggcgaat acgttc
//
LOCUS       DASCNL010001010         1230 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002065777, whole genome shotgun sequence.
ACCESSION   DASCNL010001010 DASCNL010000000
VERSION     DASCNL010001010.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002065777"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="QF359_13210"
     CDS             <1..368
                     /locus_tag="QF359_13210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014753312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HJO87912.1"
                     /translation="EEKADAFLFGERGKYAPAGVVGGKSGALNEFYYPDENGADTSPP
                     MVSKMVGIHLDQGQRVRLETPGGGGYGDALERNPKQVAEDVRLGYVTAEAAAKDYKCA
                     VSNDGVLDEKETTRLRGEA"
     gene            372..>1230
                     /locus_tag="QF359_13215"
     CDS             372..>1230
                     /locus_tag="QF359_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HJO87913.1"
                     /translation="MANNQTVVGVDVGGTFTDVFFLNETDGTCNVAKVPSTQNDQSVS
                     IRNGISQRRDNLSEVSLIIHGTTVGTNALLERKGAKTGIITTKGFRDVIEMRRRDRPE
                     TWGLWGMFEPVVPRDLRVEVDERVLADGTLHTEVDLADVKFAAATLLEHGAQSVCIFF
                     MNSYANDVNEKAAISIVKEIWPNDHITTSSEILPEIREFERCSTATLNAYLQPNIGDY
                     LERLKGGLKDDGFTGEILIVQSNGGVMSVDTARHFPVRTALSGPAAGVIAGAHIGASA
                     GFPNLITCDM"
BASE COUNT          295 a          320 c          339 g          276 t
ORIGIN      
        1 tcgaagaaaa agccgatgcc tttctgtttg gtgagcgcgg caaatatgcc ccggccggtg
       61 tcgtcggcgg caagagtggc gctctcaacg aattctatta tccagatgaa aacggcgctg
      121 atacctctcc accgatggtc tcaaaaatgg tgggcatcca tctcgaccag ggccaacggg
      181 ttcgtttgga aaccccaggc ggcggcggtt acggcgatgc gttggaacgt aatcctaaac
      241 aagttgccga agatgtccga ctgggctacg tcacggccga ggcagccgct aaagattata
      301 aatgtgccgt ctccaacgac ggtgtcctgg acgaaaaaga aaccacgcgg ttgcggggag
      361 aagcttaaac catggccaac aatcaaacag ttgtcggcgt tgatgttggc ggcacattta
      421 cggatgtttt tttcttaaac gagacggatg gcacctgcaa cgttgccaag gtgccctcaa
      481 cccagaacga ccaatcggtg agcatccgta acggtatcag ccagcgacgg gacaatcttt
      541 ccgaagtctc actcattatc catggcacga ccgtcggcac caatgcgctt ctggagcgca
      601 agggtgccaa gaccggaatc atcacgacca aagggtttcg agatgtcatc gaaatgcgcc
      661 gtcgtgacag gcccgagacc tggggccttt ggggaatgtt tgaacctgta gtgccgcgcg
      721 atctgcgcgt tgaggttgat gagcgggtac tcgccgatgg cacgctgcac actgaagttg
      781 atctcgccga cgtgaaattt gcagccgcaa cattgctcga acatggtgcc caatcggttt
      841 gtattttctt catgaacagc tatgccaatg atgttaatga aaaagcggcg atcagcattg
      901 tcaaagaaat ttggccgaac gatcacataa ctacatcgtc tgaaattctg ccagaaatca
      961 gagaatttga acgctgctcc acggcgaccc ttaacgccta tctgcagcct aatataggtg
     1021 actatctcga gcgtcttaaa ggcggcttga aagatgatgg tttcactggt gagattttga
     1081 ttgtgcaatc aaacggtggc gtcatgtcgg ttgatacggc gcgtcacttc ccggtgcgca
     1141 cggccctttc cggtccggcg gccggcgtta ttgctggtgc ccatatcggc gccagcgccg
     1201 gcttcccaaa tctcattacc tgcgatatgg
//
LOCUS       DASCNL010001011         1172 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002070363, whole genome shotgun sequence.
ACCESSION   DASCNL010001011 DASCNL010000000
VERSION     DASCNL010001011.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1172)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1172)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002070363"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            114..902
                     /locus_tag="QF359_13220"
     CDS             114..902
                     /locus_tag="QF359_13220"
                     /inference="COORDINATES: protein motif:HMM:NF024809.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO87914.1"
                     /translation="MLELYHNDMSTCAQKVRLTLAEKGLEWEGHHMNLRKGDTRTPEY
                     IKMNPGAVVPTLIDNGTIICESTVIMEYLEDAYPEPSQHPKDPVERARMRGWLKQLDE
                     GLHAAVGTISGAVAFRYQTMAGRTEAEVIEHINLIPEPERRDRTMENNLKGVESNYFT
                     PAIKRWDKLFSDMEVALGGNTWLTGEEYSLADIAYTPYLTRMDHLKFMGLFDQRPKIL
                     DWYGRVKARPNYAGISDWINDKYIPLMAEKGDEAWPRIKEILAA"
     gene            973..>1172
                     /locus_tag="QF359_13225"
     CDS             973..>1172
                     /locus_tag="QF359_13225"
                     /inference="COORDINATES: protein motif:HMM:NF020922.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2461 family protein"
                     /protein_id="HJO87915.1"
                     /translation="MASDFKGFSKDFFGFFIELSENNNREWFNANKARYTDIVQDEMV
                     EFIIAIAPHLEKISTHYIANPKR"
BASE COUNT          352 a          258 c          274 g          288 t
ORIGIN      
        1 gatatccagc gctcaacgga tttgctgaaa aatcatattt tccaaaccac caaaattgtc
       61 gttaaataca tggcacaaga aaacacctaa ccaaaaccga ggaaaatcca gaaatgttag
      121 aactgtatca taacgacatg tcgacttgtg cgcagaaggt gcgcctgact ttggccgaga
      181 aaggtcttga gtgggaaggc caccacatga atttacgcaa aggcgacaca agaacacctg
      241 agtatattaa aatgaatccc ggcgctgtgg tgccaacact tatcgataac ggcactatca
      301 tatgtgaatc aaccgtcatc atggaatatc tcgaggatgc ttatccggag ccaagccagc
      361 accctaagga tccggttgaa cgagcccgaa tgcgtggctg gttaaaacaa ttggatgagg
      421 ggcttcatgc cgctgttggt acaatttccg gggcggttgc ctttcggtat caaactatgg
      481 caggccgcac cgaagctgag gtgatcgagc atatcaatct tattcctgaa cctgaaagac
      541 gggaccgtac catggaaaat aatttgaaag gtgttgaatc aaattatttt accccggcga
      601 tcaaacgctg ggacaaattg tttagcgata tggaagtagc gcttggcggc aatacctggc
      661 taacgggcga ggaatattcg ctggccgata ttgcctacac gccctacctc acccgcatgg
      721 atcacttaaa atttatgggt ctatttgatc aacggccgaa aattcttgac tggtatggac
      781 gggtgaaagc acgtcccaac tatgctggca ttagcgattg gatcaatgac aaatatatcc
      841 cgctgatggc ggaaaaaggt gatgaagcgt ggccgcggat aaaggaaatt ttggcggctt
      901 agctaaatcg ttaatttttt gaaaagtgcc aagcatcttt gattttatta acactttaag
      961 cggagataat ctgtggcttc tgactttaaa ggtttcagca aagacttttt tggcttcttt
     1021 atcgagctct ccgaaaacaa taaccgcgaa tggtttaatg ctaataaggc gcgctacacc
     1081 gacatcgtgc aagacgaaat ggtagagttc atcatcgcca ttgctccaca tctcgaaaaa
     1141 atatcgacgc attacattgc caatccgaaa cg
//
LOCUS       DASCNL010001012         1083 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002070364, whole genome shotgun sequence.
ACCESSION   DASCNL010001012 DASCNL010000000
VERSION     DASCNL010001012.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1083)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1083)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002070364"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..161)
                     /locus_tag="QF359_13230"
     CDS             complement(<1..161)
                     /locus_tag="QF359_13230"
                     /EC_number="4.1.3.4"
                     /inference="COORDINATES: protein motif:HMM:NF012885.3"
                     /note="catalyzes the formation of acetoacetate and
                     acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HJO87916.1"
                     /translation="MALSKVEICEVGPRDGLQSEERIWSVAERVELIDRLSATGVPRI
                     ETVSFVNPKR"
     gene            complement(148..>1083)
                     /locus_tag="QF359_13235"
     CDS             complement(148..>1083)
                     /locus_tag="QF359_13235"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJO87917.1"
                     /translation="ADVLSENFKPGTLEKWGLGPDELHKINPSLIISRISGYGQTGPY
                     AERPGFASVGEALGGMRYINGFPNQPPPRTGLSLGDTLTGMFAAQGILMALYWRDAMG
                     GGKGQVIDTSIAESCLSMMESALPEYDKLGVIREPSGTGLANVSPSNLFPTSDGKYVI
                     IAANIDAMFRRLCEAMEKPEWIKDPRFVDHKARGANADLLDGLIGEWTATMTAADLTE
                     HLDKNGVVVGPIYTIADVAADPHFKARNMIRREKDDFFGEIAVPGIVPIFSETEGDIG
                     WLGSPTPGSHNEEVYNGVLGISADELAELAKDGII"
BASE COUNT          259 a          326 c          251 g          247 t
ORIGIN      
        1 cgtttcggat tgacgaagct tactgtttcg atgcgcggca ctccggttgc cgataagcgg
       61 tcgatcaact cgacacgttc tgcgacactc caaattcgct cctcactttg gaggccatca
      121 cgcggaccaa cttcacatat ctcaacttta gataatgcca tctttggcaa gctccgctaa
      181 ttcatccgca ctaatcccga gaacaccatt ataaacctcc tcattgtggc tgccaggggt
      241 gggcgagccg agccagccga tgtcaccttc agtttcgctg aatatcggca cgatacccgg
      301 caccgcgatc tcaccgaaga aatcatcctt ctcccggcgg atcatattac gagccttgaa
      361 atggggatca gccgccacat cggcgatggt gtagatcggg ccgacaacga caccgttttt
      421 atccaaatgc tcggtcaaat ccgccgccgt catcgtcgcc gtccattcgc cgatcagacc
      481 atcaagtaaa tcggcattgg ctccgcgcgc tttatgatca acaaagcgcg ggtctttgat
      541 ccattccggt ttttccatcg cttcacaaag ccgcctgaac atggcatcta tattggcggc
      601 aatgatgacg tatttaccgt cactggtggg aaacagatta gacggcgaga cattggcgag
      661 cccggtacca ctgggctccc tgatcacgcc gagcttatca tattccggca gcgcactttc
      721 catcatcgac aggcaggatt cggcgatcga cgtatcaatc acctggccct taccgccacc
      781 cattgcatcc cgccaataga gcgccattag aataccttga gcggcaaaca ttcctgtcaa
      841 cgtatcgccg agcgacaggc cagtacgggg cggcggctga tttgggaaac cattaatata
      901 acgcatccca ccaagggctt cgccaacact ggcaaaacct ggacgctccg cataaggtcc
      961 ggtttggcca taacccgaaa tcctcgaaat aatcaaactg ggattaattt tatgcagctc
     1021 gtccggaccg agcccccatt tctcgagtgt gccgggttta aaattctctg atagaacatc
     1081 tgc
//
LOCUS       DASCNL010001013         1960 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002075633, whole genome shotgun sequence.
ACCESSION   DASCNL010001013 DASCNL010000000
VERSION     DASCNL010001013.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002075633"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="QF359_13240"
     CDS             complement(<1..341)
                     /locus_tag="QF359_13240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macro domain-containing protein"
                     /protein_id="HJO87918.1"
                     /translation="MSNLEIVEADITTLQVDTIVNAANESLLGGGGVDGAIHRPAGPE
                     LLAECRTLNGCPTGEAKLTSGYNLPANFVIHTVGPVWQGGTANEDELLASCYRRSLEI
                     ARDQDIQSIAFP"
     gene            complement(356..1471)
                     /gene="ald"
                     /locus_tag="QF359_13245"
     CDS             complement(356..1471)
                     /gene="ald"
                     /locus_tag="QF359_13245"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HJO87919.1"
                     /translation="MRIGVPKEIKVHEYRVGLVPASVRELIHNGHEVVVEQNAGAGVG
                     FEDSDFAAIGAEILPTVADVFETADMIIKVKEPQTSEISMLRQDQVLFTYLHLAAEPE
                     QTQGLVDSGCVAIAYETVTDDQGGLPLLAPMSEVAGRMSIQVGALCLEKEKGGKGILL
                     GGVPGVPVAKVVVLGGGVVGTNAARMAMGLEASVTVIDKSLPRLNELDMQFGPTLNTI
                     YATMETIEQYVIGADLVIGAVLIPGAAAPRLVTKDMIKQMKKGSVVVDVAIDQGGCFE
                     TSKPTTHADPTYIVDDVVHYCVTNMPGAVARTSARALNNATLPFVIDLANKGYQRALK
                     DDPHLMNGLNIHKGHVTYEAVALDLSLEYVPPAEVIA"
     gene            1573..>1960
                     /locus_tag="QF359_13250"
     CDS             1573..>1960
                     /locus_tag="QF359_13250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87920.1"
                     /translation="MTDDNMPKTILVYVGLDRVGDSLLKLPFVRGLRDAYPDAHITWL
                     AGKDTSVYASIMASVVNGLIDEVIEHPGAVDGKMMGVGLSPKELMRRPLKGRDFDLIF
                     DTQKVALATLILFRIRHKVFISPFGNF"
BASE COUNT          477 a          535 c          466 g          482 t
ORIGIN      
        1 ggaaaagcaa tcgattgaat atcttggtct ctagcaattt ccagcgaccg ccgatagcaa
       61 cttgcgagca attcatcctc attagcggtc ccaccctgcc acaccggtcc gaccgtgtgg
      121 atgacaaaat tagctggtaa attatagccg ctggttagtt tggcttcgcc ggtcggacag
      181 ccatttaaag tccggcattc tgccaacagc tccggcccgg ccggccggtg aatagcgccg
      241 tctacaccgc cgccacccaa caatgattcg ttggctgcat taacaatggt atcaacttgc
      301 agtgtcgtta tatcagcttc aacaatctca agattagaca ttttgctatt tcaatttaag
      361 cgattacttc ggctggcggc acatattcca agctcagatc aagggcaacc gcttcatagg
      421 tgacgtgacc tttatgaata ttaagcccgt tcatcaaatg cggatcgtct ttcaaggctc
      481 gctggtagcc tttattggcg agatcgatga caaagggcaa agttgcattg ttgagcgccc
      541 gggccgaggt gcgggcgact gcacccggca tgttggtgac gcaatagtgg acgacatcgt
      601 caacgatgta ggtcgggtca gcatgggtgg ttggtttact ggtttcaaaa cagccacctt
      661 gatcaatcgc cacatcgacg acgaccgagc cttttttcat ctgtttgatc atgtctttgg
      721 tcaccagtcg gggcgcggcg gcgcccggga tcaacaccgc accgatcacc aaatcagcgc
      781 cgatgacata ttgctcaatg gtttccatgg ttgcgtaaat ggtattaagc gttggcccaa
      841 actgcatatc taattcgttc agccggggca gagatttatc gatcaccgtc accgaggctt
      901 cgagccccat cgccatcctg gccgcattgg tgccgacaac gccaccgccg agcacaacga
      961 ctttcgccac cggaactccg ggtacgccac ccagcagtat acccttgccg cctttctctt
     1021 tttcaagaca aagcgcacca acttggatcg acatgcggcc ggcgacctca ctcatgggtg
     1081 ccaataacgg caagccgccc tggtcatctg tgacggtttc gtaagcaatg gcgacgcagc
     1141 cggaatcgac caagccttgt gtttgttccg gctcggcggc caagtgtaga taggtgaaca
     1201 atacctgatc ctggcgcaac atcgaaattt cagaggtttg cggttcttta accttgatga
     1261 tcatatctgc cgtctcaaac acatcggcga cagtgggtaa aatttcagca ccaattgcag
     1321 cgaaatcact atcctcaaag ccaacacccg caccggcgtt ttgttcaaca acaacttcgt
     1381 ggccattatg gatcaactcg cgtacactcg ccggcacaag cccgacccga tattcgtgaa
     1441 ctttaatttc tttcggtacg ccgatgcgca tagtccgctc ctgttccaat gcttatattt
     1501 aaacatagtt cgctaactca gagaaacatc atagttttct aacgcaccgc cttatgttac
     1561 tcaaggtcca caatgactga tgacaatatg ccaaaaacga tactcgtcta tgttggcctc
     1621 gaccgggtcg gtgacagcct cttaaaactg ccattcgtca gaggtttacg cgatgcctat
     1681 ccagacgccc atataacctg gcttgccggc aaagacacca gcgtctacgc cagcatcatg
     1741 gcatccgttg tcaatggact aattgacgaa gtgattgaac acccaggcgc ggtcgatgga
     1801 aaaatgatgg gcgtgggttt aagcccgaaa gagctaatgc gtcggccctt aaagggacgc
     1861 gattttgatt tgatatttga tacacagaaa gtggctttgg cgacgttgat cctgtttcgc
     1921 atccgccaca aagtatttat ctcaccattt ggcaattttt
//
LOCUS       DASCNL010001014         1139 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002076739, whole genome shotgun sequence.
ACCESSION   DASCNL010001014 DASCNL010000000
VERSION     DASCNL010001014.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1139)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002076739"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /locus_tag="QF359_13255"
     CDS             complement(<1..1136)
                     /locus_tag="QF359_13255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative peptidoglycan glycosyltransferase FtsW"
                     /protein_id="HJO87921.1"
                     /translation="MKRTFSRTDESLFGRWWWTVDRWMIAAIIAILALGGILALAASP
                     AVAERIGLDTFYFVQRQFIVLPFVLIVMFAVSLLNRSGVRQLAVICFGLAVLLIIYTL
                     VDGTKIKGAIRWVTFAGFSIQPSEFVKPSFAIIGAWMFSAWRLKEDFPGYMVAVGLYL
                     TVVALLLMQPDVGMAILVSVVWGVQFFLAGLPMLLVLAIGIVFICGGFVAYFNFEHVQ
                     IRIDRFFDPASTEAYQVMRSLEAFRNGGVFGRGPGEGHVKEVLPDAHADFIFAVAGEE
                     FGLMMTLLIVGLFLFVVLRGFGRAFKETDLFVQLAVAGLLVQLGLQAIINMASTLNLM
                     PTKGMTLPFVSYGGSSMMALAIGLGMVLALTRERPGQENAWRDLG"
BASE COUNT          357 a          326 c          253 g          203 t
ORIGIN      
        1 ccgagatcgc gccacgcatt ttcctgtccc ggccgctcgc gggtcagcgc caaaaccata
       61 ccgagaccaa tcgccaaagc catcattgat gagccgccgt aggaaacaaa cggtaaggtc
      121 attcccttgg tcggcatcag gttaagcgtc gaggccatgt tgatgatcgc ttgcaaaccg
      181 agttgaacta gtaatccggc aacggcgagc tggacaaaca gatcagtttc cttgaaggcg
      241 cgaccaaatc ctctgagcac aacgaacaaa aacaagccaa caatcaacag tgtcatcatg
      301 agaccgaatt cttctccagc gacagcgaaa ataaaatcag catgggcatc cggcagcact
      361 tctttaacat ggccttcacc cggtccccgg ccaaaaacac cgccattgcg aaaagcttcg
      421 agcgaccgca tgacttgata agcctcggtg cttgcaggat cgaaaaaacg gtcgatgcgg
      481 atttgcacat gttcaaagtt aaaataggct acaaatccac cacagataaa aacgatgcca
      541 attgccaaca ccagcagcat cggcaagccg gcgaggaaaa actggacacc ccagacgacg
      601 ctgaccaaaa tcgccatacc gacatcgggc tgcatcagca acaaggcaac gacggtaaga
      661 tacagcccaa ccgctaccat ataaccggga aaatcttctt tgagccgcca agccgaaaac
      721 atccacgcac cgataatagc aaaactcggc tttacaaatt cggatggctg gattgaaaaa
      781 ccggcgaacg ttacccaccg gatggcacct ttgatcttgg tgccgtccac cagcgtataa
      841 attattaata ataccgccag gccaaaacag atgacagcga gttgacgaac accacttcga
      901 tttaacagtg acacggcaaa catgactatc aagacaaacg gcagaacaat aaactgacgc
      961 tggacaaagt aaaaagtatc aagcccgata cgttctgcaa ctgccggact tgcggccagc
     1021 gccaaaatcc ctcccagcgc caatatggcg ataatagctg ctatcatcca gcgatcaaca
     1081 gtccaccacc agcggccaaa gaggctttca tccgtgcggg agaatgttct tttcatgcg
//
LOCUS       DASCNL010001015         1290 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002085237, whole genome shotgun sequence.
ACCESSION   DASCNL010001015 DASCNL010000000
VERSION     DASCNL010001015.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1290)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1290)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002085237"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="QF359_13260"
     CDS             complement(<1..206)
                     /locus_tag="QF359_13260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87922.1"
                     /translation="MKMGRFIVDTHVHAQRFAAGKAFKEKKIDTDKASYNDLALAIRG
                     LVAYDNSPRLIYDMDCYDVDMCVLL"
     gene            complement(335..880)
                     /locus_tag="QF359_13265"
     CDS             complement(335..880)
                     /locus_tag="QF359_13265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87923.1"
                     /translation="MDRREFFKFGASKAIDTVSEAVNNKLSELNINWIRPPFALPEND
                     FIKTCTKCNECLKACPHNILFKLRDSTPAMDLSTKGCHMCDDWPCVIACEPAALLRDA
                     ENPEKLPKIAVVTINEVTCLPYSGPECGACAHVCPVPNALTWKNGIKPAIDPELCTGC
                     ALCREACIVEPKAINIAVLKH"
     gene            complement(888..>1290)
                     /locus_tag="QF359_13270"
     CDS             complement(888..>1290)
                     /locus_tag="QF359_13270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87924.1"
                     /translation="EPGRISVYIKRLDNSKSFDGVVKFTAHQDDEFLFFSTSGKTENL
                     GTQRLDDSVYRQAFNFHAAGDFLVRAKFKSKGEDYTLDIPLRVGAPKFIGPIGIFVGV
                     FIAILLLVSIVQYRRSMTGKIRTQHKSDLQN"
BASE COUNT          325 a          301 c          316 g          348 t
ORIGIN      
        1 agcaagacgc acatgtcgac atcgtagcaa tccatgtcat atatcaggcg gggtgaattg
       61 tcgtaggcga cgagccctct aatggcgagc gcaagatcgt tgtagctcgc cttatcagta
      121 tcgatttttt tctctttaaa ggcttttcct gcggcaaacc gttgggcgtg aacatgtgtg
      181 tcgacaataa aacgtcccat cttcatgacg tatcctcccg tttaagaata ttttccttac
      241 cgtcaattat tatgcattcc caaccattgt ccacaccttt gttgttgaac gatattgatt
      301 acttatctta attggtgtgg tgaaattggc agcgctaatg tttcaagacg gcgatgttga
      361 tggctttcgg ctcgacaatg caagcttcgc ggcagagcgc gcagccggtg cagagctccg
      421 gatcgatcgc gggcttaata ccgtttttcc aagtcaaagc atttggtaca gggcacacat
      481 gcgcacaggc gccgcattcg gggccgctat agggcaggca ggttacttcg ttaatcgtaa
      541 caacagcgat tttgggcagc ttttcgggat tttcagcatc gcgcaggaga gccgccggct
      601 cacacgcgat aacgcagggc caatcatcac acatatgaca gccttttgta gataaatcca
      661 tcgccggcgt actatcccgt aatttaaaca gaatgttatg ggggcaagct ttgaggcatt
      721 cattacactt ggtgcaagtc ttaataaaat cattctcagg cagggcaaag ggcgggcgta
      781 tccagttgat gttcaactcg gataatttgt tgttcacagc ctcggagacc gtatcgatag
      841 ctttgctagc accgaattta aaaaactctc ttctatccat agcgacctta gttctgcaaa
      901 tctgatttgt gttgcgttct tatttttccg gtcatcgagc ggcggtattg cacaatgcta
      961 accaggagta agatggcaat aaaaacaccg acaaaaatgc cgatagggcc gataaatttc
     1021 ggtgcgccaa cacgtagggg aatgtccaag gtgtagtctt cgcctttaga tttaaacttg
     1081 gcgcggacta gaaaatcacc ggcggcgtga aaattgaagg cttgccggta aacgctgtcg
     1141 tcgagccgct gagtacccaa attttcagtt tttccgctgg tgctgaaaaa caaaaattca
     1201 tcatcctggt gggcggtaaa tttcactacg ccatcaaatg acttactgtt gtcgaggcgt
     1261 ttaatgtaga cgctgatgcg gccaggctcc
//
LOCUS       DASCNL010001016         1187 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002089234, whole genome shotgun sequence.
ACCESSION   DASCNL010001016 DASCNL010000000
VERSION     DASCNL010001016.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1187)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1187)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002089234"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            85..>1187
                     /locus_tag="QF359_13275"
     CDS             85..>1187
                     /locus_tag="QF359_13275"
                     /inference="COORDINATES: protein motif:HMM:NF015551.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042925 - benzoate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042919 - benzoate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate/H(+) symporter BenE family transporter"
                     /protein_id="HJO87925.1"
                     /translation="MPLKPTHHPFPGIRKILADYELIHLSNAVIAFLFAASAPIAIVL
                     AVGTTGGLTEAELASWIFGGIALNGLLGIVISVIYRQPLAFFWTISGTVLVGPALQHS
                     SFPEVIGAFLGTGLLLLVLGLSGWIKRIMAVMPMPIIMAMVAGVFLEFGLDWIKALGS
                     DPWVAGPMTVAFILLSLNANIAKRFPPMIGVLLVGIIAVSFAGSFSPDTELEYVIITP
                     TIIRPEFSWMTMVELVVPIAVTVLAAQNAQGIVILRNVGHNPPTNLITAACGGASIIT
                     AFFGSVSTCLTGPVNAILSSGGKLEQQYIAAIIIGIFAILFGLHAPLMTKLLLAMPAS
                     FIATLAGLALIRVLQSAFVVSFGGSFTLGALVS"
BASE COUNT          218 a          310 c          314 g          345 t
ORIGIN      
        1 gttcttcgag ttagaatgga tgcgtaaccg acaggcaaac ctgcttaaat tgccgttcat
       61 aagttcaaga gagtggaaat tgatttgccc ctaaaaccga ctcaccatcc atttcccgga
      121 attagaaaaa tacttgccga ttatgagctt atccatctca gcaatgccgt catcgccttt
      181 ctgtttgcag cctctgcgcc aattgctatc gttttagccg tcggcaccac cggcgggctc
      241 accgaagctg agctggcctc ctggatattt ggcggcatag cgctgaatgg actgctgggc
      301 attgttattt cggtcattta ccgccagccc ctggcgtttt tttggaccat ctccggcacc
      361 gtgctggtcg ggccggcgtt gcagcattct agttttccgg aagttatcgg tgctttctta
      421 ggcaccggcc tattgctgct tgtgctgggt ctcagcggct ggattaagcg cattatggcg
      481 gtgatgccga tgccgatcat tatggcgatg gtcgccggcg tatttcttga atttggcctg
      541 gattggatta aagccttagg gagcgacccg tgggttgccg gtccgatgac agtggcgttt
      601 atcttgctgt cgttgaacgc taacattgcg aaacgctttc caccgatgat cggtgtgctg
      661 ttggttggga ttatcgctgt ctcctttgct ggctccttta gtcctgacac tgagttggaa
      721 tatgtcatca tcacaccgac aattatccgg cctgagtttt cgtggatgac catggtcgag
      781 ctagtggtcc caatagccgt gaccgtgctg gcagcgcaaa atgcccaagg catcgtaatc
      841 ctgcgcaatg tcggtcataa cccgccaacc aatctgatta ctgcggcctg cggcggcgct
      901 tcgatcatca cggcgttttt cggctctgtc tcgacctgcc tgacgggccc ggtcaacgcg
      961 attttatcaa gcggtggcaa attggagcag caatatatcg ccgcaattat tatcggtatt
     1021 tttgccattc tgtttggcct gcatgcaccg ctgatgacca aacttctact ggcgatgccg
     1081 gcgtctttta ttgccacgct cgctggattg gctctcatac gtgttttgca aagcgccttt
     1141 gttgtttcct ttggtggcag ttttaccctc ggcgcgctgg tgtcgtt
//
LOCUS       DASCNL010001017         1179 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002091714, whole genome shotgun sequence.
ACCESSION   DASCNL010001017 DASCNL010000000
VERSION     DASCNL010001017.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1179)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1179)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002091714"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..702)
                     /locus_tag="QF359_13280"
     CDS             complement(<1..702)
                     /locus_tag="QF359_13280"
                     /inference="COORDINATES: protein motif:HMM:NF015699.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HJO87926.1"
                     /translation="MGKQKKKTAKAIASMTGFARSSGSVEGYNWNWEAKSVNGKGLDV
                     RCRLPQGFEEIDVEARNTTGKTFKRGNFNLILTIQETSRQSQYQVNQELLDQLVETAT
                     QIRAESKEFDKPSLDGLLAVRGVIEPVSESEDKANRTARKKEVLGGLKDLLAALEKNR
                     VAEGARIAKALFEQLNAIIKLCGQAEKLASLQPDNIREKLNQQVAELLDAVPNLPEER
                     LAQEAAVLMTKADVRE"
     gene            798..>1179
                     /locus_tag="QF359_13285"
     CDS             798..>1179
                     /locus_tag="QF359_13285"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJO87927.1"
                     /translation="MKKFRSVLITGASSGIGKALAESLAGDGVCLAISGRDEARLKAV
                     ADSCRKNGAIVDSRIIDVTDQTTMKNWLQEIDSLYPLDLVIANAGVSPGTSGKAEKTE
                     QMRRMLDINVNGVLNTIDPVVPCMV"
BASE COUNT          268 a          300 c          262 g          349 t
ORIGIN      
        1 ttctcgcaca tctgccttgg tcatcaaaac agctgcttct tgggccaacc tttcctccgg
       61 caaattcggt acagcgtcta atagttcagc aacctgttgg tttaattttt cacggatatt
      121 gtccggctgg agcgacgcca atttttccgc ttgcccgcaa agtttaatga ttgcgttcaa
      181 ttgttcgaat aaagctttgg cgattcgcgc gccttccgcc acccggttct tctcgagtgc
      241 agccaatagg tcttttaaac cacccaatac ctctttcttg cgcgccgttc ggttggcttt
      301 atcttcgctt tcgctaaccg gttcaataac accacgcacc gcaagtaggc catcaagact
      361 gggtttatca aactctttag attcagcgcg aatttgagtg gccgtttcga cgagctgatc
      421 caacagctct tgatttacct gatattggct ttggcgtgaa gtttcctgga tagttagaat
      481 gagattaaaa tttccccgtt tgaaagtttt gcccgtggta tttcgcgctt caacgtctat
      541 ttcttcaaat ccttgcggca ggcggcagcg cacatccagc cccttgccat taacgctctt
      601 ggcttcccaa ttccagttat agccttcaac gctgccggaa cttctcgcaa atccggtcat
      661 actggcaatt gctttcgctg tttttttctt ttgtttaccc atagccccta gatagcacat
      721 tctttttgat atgccattgc aaaatacgac tgcggattca aaactgtacc tgaaacacaa
      781 tcttgggatt agttcctgtg aaaaagttta gatccgttct tattaccggc gcttcgagtg
      841 gcatcggcaa ggctttagca gaatcattgg caggtgatgg cgtatgtttg gccatctccg
      901 ggcgtgatga agcgcgccta aaagcagttg cggatagctg ccggaaaaat ggcgccattg
      961 tcgattccag aatcattgat gttaccgacc aaactacgat gaaaaattgg ctccaggaaa
     1021 ttgactccct gtatccactt gatttggtga ttgccaatgc cggcgtttca cccggaactt
     1081 ctggcaaggc cgaaaaaact gagcaaatgc ggcgcatgct cgatatcaat gttaacggcg
     1141 ttttgaatac aatcgatccc gtggtgccct gcatggttg
//
LOCUS       DASCNL010001018         1404 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002092385, whole genome shotgun sequence.
ACCESSION   DASCNL010001018 DASCNL010000000
VERSION     DASCNL010001018.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1404)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1404)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1404
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002092385"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1217
                     /locus_tag="QF359_13290"
     CDS             <1..1217
                     /locus_tag="QF359_13290"
                     /inference="COORDINATES: protein motif:HMM:NF019640.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJO87928.1"
                     /translation="GNLFMPPNSKSPNTLDIDTNIPLPEELVKRAKALIPNLRSRTER
                     CEEERRIPQENLDEMLAAGLFNTMKPKRYGGYEMGWETLCDLTLAIAEGCGSTGWIMG
                     VCGGHPLMITNFDFDVQDEVWGTNPNTIISSAKMNSGAFKKTVGGYIGNGIMAISSGC
                     HHADWFFAGGSDIEGSDRLLSTLIPLTDVTILDTWQVVGLAGTGSHDLEMKDVFVPDS
                     RAFIGGERPPGTGLYDYGVYKVGHHALGPYTLASVVVGMAVGALDIFVADIKDKTSRH
                     GAKIADFQSLQLRIAESAAELDAAKLLIRQNTREAMRFIGEGKPVPRDPHARLILEGS
                     YASQLAGKAIERIFYAGGAGELFLDRHLQRIFRNVQAGRAQFGLNWDVQGTNYGRWVL
                     GLEGEQGTTPLL"
BASE COUNT          336 a          337 c          366 g          365 t
ORIGIN      
        1 tggggaattt atttatgccg cccaactcaa aatcaccaaa cactttagat atagacacca
       61 acataccttt acccgaagaa ttggttaaac gagctaaagc gctgatcccg aatttgcgta
      121 gccgaacaga gcgttgcgaa gaagaacggc gcatcccgca ggaaaatctc gacgaaatgc
      181 ttgcggccgg acttttcaat actatgaagc ccaaacgcta tggcggttat gaaatgggct
      241 gggagacgct ctgtgacctc actttggcaa tagccgaagg ctgcggctcg accggctgga
      301 tcatgggcgt ttgcggcggc cacccactaa tgatcaccaa tttcgatttt gatgtgcagg
      361 atgaggtttg gggcactaac cccaatacga tcatatcttc cgccaagatg aacagtggcg
      421 cttttaaaaa aaccgttggc ggttatatcg gtaatggcat tatggcgatt tccagcggct
      481 gccatcatgc cgattggttt tttgccggcg gtagcgatat cgaaggcagc gacagattgc
      541 tttccacgct gatcccgctc actgacgtaa ccatattgga cacctggcaa gtggttgggt
      601 tggctggaac cggcagtcac gatcttgaaa tgaaagatgt ctttgtaccg gatagtcgcg
      661 cctttattgg cggcgagcgt ccgccgggca cagggcttta tgattacggc gtctataaag
      721 tcggccatca cgcacttggt ccttatactt tggcatcggt cgtcgtcggt atggcggtcg
      781 gcgcacttga tatattcgtc gccgacatca aggataaaac ttcccgtcat ggcgctaaaa
      841 tcgctgactt ccaaagcctg caattgcgca tcgccgaatc agctgctgaa cttgatgctg
      901 ccaaactgct aatccggcaa aatacgcggg aagcgatgag atttatcggt gagggtaagc
      961 cggttcctcg cgatccgcat gcccgcctga ttttggaagg cagttacgcc tctcagctcg
     1021 ccggcaaagc gattgaacgc atcttttatg ctgggggtgc tggcgagctg ttcctcgacc
     1081 ggcatcttca gcgtatcttt agaaatgtcc aagctgggcg ggcgcaattt gggcttaatt
     1141 gggatgtcca aggcaccaat tacggccgct gggtattggg cttggaaggc gagcagggaa
     1201 ccacgccact actttaataa ccaattgttt ttattaacta aataattata tgttgctttt
     1261 ttgttctttt tggtttaaaa ccggtttcag ttaaccagaa agaggagaat tgtcatggat
     1321 accatagttt ttttcaaaga attcgctgcc ctcagcacct tttttgccgc cgggtatgtc
     1381 tggatggtaa tcatctgaac gctg
//
LOCUS       DASCNL010001019         1845 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002095039, whole genome shotgun sequence.
ACCESSION   DASCNL010001019 DASCNL010000000
VERSION     DASCNL010001019.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1845)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1845)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002095039"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1048)
                     /locus_tag="QF359_13295"
     CDS             complement(<1..1048)
                     /locus_tag="QF359_13295"
                     /inference="COORDINATES: protein motif:HMM:NF015168.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF255 domain-containing protein"
                     /protein_id="HJO87929.1"
                     /translation="MRKRLKIITVAIFIFGAMAHAAVAIELENQMAVESSPYLRLHAK
                     DLVAWQPWQESSLEAAQQLGKPIFLSIGYLACHWCHVMRRESFADPEIAGLINRRFYP
                     ILVDREELPQVDALYQSALAVMGLPIGWPLTVFLTSDRKPIWGGAYFPKKTKFGSPGL
                     DTVLIRILDIYSKRKKDVLADAKQVIDELERESENSPGTISLKHIDKFAANLLTEIDP
                     SDGVFGGAPKFPNVIALETLWRTYIRTGRKIYGQAVEKAVQQMVLGGLYDHIGGGFFR
                     YTVDQQWRTPHFEKMLGTNARLLRLMTEVWREFRNPILRDRILQTVQFLLREMLKSGR
                     GFVSSIDADSEADGG"
     gene            1520..>1845
                     /locus_tag="QF359_13300"
     CDS             1520..>1845
                     /locus_tag="QF359_13300"
                     /inference="COORDINATES: protein motif:HMM:NF025664.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87930.1"
                     /translation="MTSLVPPHGANALKPLLLPEKVRIQELNRAEALKKIPMTSCEVC
                     DLLLLSMGAYTPLNGFMGKADWRGVCEDMKLADGLFWPVPITVSARQALADQIEIGED
                     VALLDG"
BASE COUNT          521 a          433 c          416 g          475 t
ORIGIN      
        1 ttcctccgtc agcttcgcta tcagcgtcaa tactggagac gaatcctctg cctgacttta
       61 acatctcacg caataagaat tggaccgtct gcaaaatacg gtcacgcaat ataggattac
      121 ggaattcgcg ccagacctca gtcatcaacc gcaataatcg ggcgttggtg ccaagcattt
      181 tctcaaaatg aggcgtgcgc cattgctggt cgaccgtata acgaaaaaac ccaccgccga
      241 tatgatcgta gaggccgccc aataccattt gttgcactgc tttttctacc gcttggccat
      301 agattttacg tccggtccta atataagtgc gccacaatgt ctccagcgct atgacgttgg
      361 gaaatttagg tgcacctcca aacacgccat ctgatgggtc tatttcagtt agcagatttg
      421 ccgcaaattt atcaatatgc tttaaagaaa ttgtgccagg tgaattttct gattcccgct
      481 caagttcatc gataacttgc ttggcatccg ccaaaacatc ttttttacgt ttgctataga
      541 tgtccaaaat ccggatcaac accgtgtcta gtcccggaga gccgaatttg gttttcttgg
      601 gaaaataggc tccaccccag atcggttttc gatcactggt caagaataca gtcagcggcc
      661 aaccgatcgg caaacccatc accgccagtg cggattggta aagtgcatca acttgcggca
      721 attcttctcg gtcaaccagg atgggataaa accgacgatt gattagacct gctatttcag
      781 gatcggcaaa actttcacgc cgcataacgt ggcaccagtg acaggccaga taaccgattg
      841 aaagaaaaat cggtttgccc aattgctggg cggcctcaag agagctttcc tgccaaggtt
      901 gccaggccac taaatccttg gcatgaagac gcagatacgg actagattct acggccatct
      961 gattttcaag ttcgatggct accgccgcgt gagccatagc accaaaaata aatatggcaa
     1021 cagtaattat ttttaaacgt tttctcataa ttttagcatc gtggtaatat tagaaaagaa
     1081 aggccaattc aaaaattaca taaattatgc gtaaaatcta gtaacggctg agttactcat
     1141 taaggggttt aaattttttg attgggtcga caggtcactc caggtataat tgttcaacgt
     1201 catataagat gacacgattt caaggtattt tttatccccc gtcagcgcct ctggcactag
     1261 cttgtagtat ttgataagag agagtttctg gctcatcgta acgagaaagg agttatgaat
     1321 gagacagaat atgagaacac ggggttcttc gtccgagaag acggtcaaag acatccgccg
     1381 caccacccgc aaacagtatt cagcggaaga gaagatccgg ataaactggg taaaaccgta
     1441 caattgttgt aagtatagcg cgcttagtat atttcctact ttccttaatt aacaataata
     1501 gtacggagct tcagcgaata tgaccagtct agttccacca cacggcgcca acgctttaaa
     1561 acctttgttg ttaccggaga aagttcgaat ccaagagcta aaccgggcgg aagcattgaa
     1621 gaaaattccg atgaccagct gcgaagtctg cgacttgctg ctgctgtcaa tgggcgccta
     1681 cacccctctc aacggattta tgggtaaagc agattggcgt ggcgtttgcg aagacatgaa
     1741 attggccgac ggcttatttt ggccagtccc aataacggtt tcggccaggc aagctttagc
     1801 cgatcaaatt gaaattggcg aagacgtcgc tctgctggac gggga
//
LOCUS       DASCNL010001020         1021 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002103690, whole genome shotgun sequence.
ACCESSION   DASCNL010001020 DASCNL010000000
VERSION     DASCNL010001020.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1021)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1021)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002103690"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..974)
                     /locus_tag="QF359_13305"
     CDS             complement(<1..974)
                     /locus_tag="QF359_13305"
                     /inference="COORDINATES: protein motif:HMM:NF012531.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HJO87931.1"
                     /translation="MGGNINWMAARRHNMSSTHLGDDLDKLWPLIGDGISDSASFDNA
                     LELLVAGGYTLSHAMMLMIPEAWNDNPLMDDGRRAFYEYNAAMMEPWDGPAAVAFTDG
                     RQIGATLDRNGLRPARYVVTDDDLCIMGSEVGVLDIPDEKIVEKWRLQPGKMFLIDLE
                     EGRIIDDAELKNSLSNAQPYQNWLDKTQIRLEDLPADVEVMPLDHQTLLDRQQAFGYT
                     QEDLKFYLLPMATSGQDPIGSMGRDTPQAVLSDRPKMLFDYFKQAFAQVTNPPIDPIR
                     EELVMSLVSLIGPRPNLLDLETGGKHMRLEVRQPILSNVDLEKIRHID"
BASE COUNT          249 a          264 c          267 g          241 t
ORIGIN      
        1 ctatcgatat ggcgaatttt ttctagatcg acgttggata ggatcggttg acgcacctca
       61 aggcgcatat gtttaccacc cgtttccaaa tcaagcagat ttggccgcgg gccgatcaac
      121 gagaccaaag acatcaccag ttcttccctg atcgggtcaa tcggtgggtt agtcacttga
      181 gcaaaggcct gtttgaaata gtcgaacagc atcttagggc ggtccgacag cactgcctgc
      241 ggggtatccc ggcccatgga gccaattggg tcctggccgc tcgttgccat cggcaataga
      301 tagaatttca gatcttcctg ggtgtagcca aaggcctgct gtcgatcaag tagcgtctga
      361 tgatcgagtg gcatcacctc aacatcggct ggcaagtctt cgagtcgaat ttgggtttta
      421 tcaagccagt tttgatacgg ttgagcgttg gacaggctgt tttttagctc agcgtcatca
      481 atgatgcggc cctcttccaa atcaatcagg aacattttac ccggttgtaa acgccacttc
      541 tcaacaatct tttcatccgg gatatcgagc acacccactt cggaacccat aatgcagagg
      601 tcatcgtcgg tgacgacata gcgggccggg cgcaaaccgt tgcggtccag ggtggcgcca
      661 atctgacggc catcggtaaa ggcgacagcg gcggggccgt cccagggttc catcatagcg
      721 gcgttatatt cataaaaagc gcggcgtcca tcgtccatca acggattatc attccaggct
      781 tcaggaatca tcagcatcat cgcatgagaa agcgtgtagc caccggcgac cagcaattca
      841 agggcattat caaaggaagc tgaatcggaa ataccgtcgc caatcagcgg ccataattta
      901 tcgagatcat cgcccagatg agttgagctc atattatggc ggcgggcggc catccagtta
      961 atattaccac ccaaagtatt tatctctccg ttgtggcaga ggtagcggaa cggttgagcc
     1021 a
//
LOCUS       DASCNL010001021         2338 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002107867, whole genome shotgun sequence.
ACCESSION   DASCNL010001021 DASCNL010000000
VERSION     DASCNL010001021.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002107867"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            147..1376
                     /locus_tag="QF359_13310"
     CDS             147..1376
                     /locus_tag="QF359_13310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJO87932.1"
                     /translation="MAESTPGPLSGLRVFDLTRVLAGPSCVQILGDLGADVIKVERPG
                     QGDDTRKFGPPFVKDQDGNETTESGYYLSANRNKRSISLDLTSEEGQKLARRMIVKCD
                     ILVENFKVGNLAKYGLSYDDLKDEFPGLVYCSITGFGQTGPMATQPGYDFMAQGMSGM
                     MSITGEKGGEPQRVGVPIADLTAGLWAAISINAALRHREVTGEGQLIDISLLDTQVST
                     LSIQGLNYLTSGEVPGLLGNAHPNIVPYQVFPTADGNVIISVGNDNQFERFCDFIERP
                     KLATDERFKTNDMRVRNRDKLTEILNEITAQKPSDYWLEGLDKIKIASGPINRIDQVF
                     ADPQVQARKMEIEMNHPAAGDKPVCMIGSPIKMSGTPVSYRRTPPMLGEHTEEVLEEL
                     LNLSADDCAMLRDKGVI"
     gene            1395..2258
                     /locus_tag="QF359_13315"
     CDS             1395..2258
                     /locus_tag="QF359_13315"
                     /inference="COORDINATES: protein motif:HMM:NF024809.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO87933.1"
                     /translation="MVQLIESDIQTKEVLDWKGLHLFHFASSSCSQKTRVSLNLKNIN
                     WHSHLVDLGASENCTEYYLGINPRGLVPTLVHDGEVHIESNDILTLLDERFPNVRLIP
                     SGMEDQVAVLLHHEDDLHLDLRTLTFRFTQPRGKEPRSKKTLKNYRERGSGTVRGERD
                     AHKDIEIKFWETAADTGITDEAVRVSTGRFKAALDELNEQLQSSKNLLGDDITLLDIA
                     WVIYVNRLVHCGYPLERLHPNVNDWFWPLRNSPDFDREMHVPPEVQKAVDERHEEQRK
                     LGTTLADVAGL"
BASE COUNT          634 a          579 c          600 g          525 t
ORIGIN      
        1 aacgtctcga tctatatgta tgatgcgggt cacgcgtttg ccaattcaga ccggccagat
       61 gctcataatc tggaagcagc agaagcagct catgagcgaa gttttaaact atttgatacc
      121 ctgaaatagc aaggaaaaca caattcatgg ctgaatctac gcccggccct ttgtcgggtt
      181 tacgggtttt cgaccttacg cgcgtgttgg cagggccaag ttgtgtgcaa attttgggtg
      241 acctcggcgc cgatgtgatc aaagttgaac gtcccggcca gggcgatgac acacgcaaat
      301 tcggcccacc ttttgttaaa gaccaggatg gcaatgaaac cacagaatcg ggatattatc
      361 taagcgccaa ccgcaataag cgctcaatca gtctcgatct caccagtgag gaaggccaaa
      421 aactggcccg aagaatgatc gttaaatgtg atattctggt ggagaatttt aaggtcggta
      481 atctggcaaa atacggcttg agctatgacg atctaaagga tgagttccca ggcctcgttt
      541 attgctcgat cactggcttt ggtcagaccg gcccgatggc gactcaaccc ggctacgatt
      601 ttatggccca gggtatgagc ggcatgatga gcattactgg cgagaaaggt ggtgagccgc
      661 aacgggtcgg cgtgccgatt gccgacctca cagcaggcct ctgggcagcg atctcgatca
      721 acgcggcgct gcgccaccgc gaagtcaccg gtgaaggaca gctgatcgat atttcgctgc
      781 tggataccca ggtctcgacg ctttccatcc aggggctgaa ttatttaaca tcgggtgaag
      841 tgccgggact gctcggcaat gcccacccca atatcgtgcc ttatcaggta tttccgaccg
      901 ccgacggaaa tgtcatcatc tcagtcggta atgacaacca atttgagcgt ttctgcgact
      961 ttatcgaacg tcccaaactg gcgacagatg aacgctttaa aaccaatgac atgcgggtgc
     1021 gtaatcgtga caaactgacc gaaatcctca acgagatcac agctcaaaaa ccctctgatt
     1081 attggctaga gggactggac aaaattaaaa tcgccagtgg gccaatcaac cgcatcgatc
     1141 aagtttttgc cgacccacaa gtacaagccc gtaagatgga gatcgagatg aaccacccag
     1201 ctgccggcga taaacctgta tgcatgatcg gtagcccgat caaaatgtcc ggtacaccgg
     1261 taagctaccg ccgcaccccg ccaatgctgg gcgaacatac cgaagaagta ctggaagaac
     1321 tcctcaatct cagcgccgat gattgtgcga tgctaagaga caaaggcgtg atttagtaaa
     1381 tatgggaggc ctaaatggtt caactgattg aaagcgatat tcagaccaag gaagtgctcg
     1441 actggaaggg gctccacttg tttcattttg ctagttcgtc ttgttcgcaa aagacccgtg
     1501 ttagcctcaa tctaaaaaac attaattggc attctcacct agtggatttg ggagcgagcg
     1561 aaaattgcac tgaatactat ctcggcataa atccccgggg actggtgccg acactggtgc
     1621 atgacggcga agttcatatc gaaagcaatg acattctcac tctgctggat gagcggttcc
     1681 caaatgttag attgatacca tcgggaatgg aagatcaggt tgcggtgttg cttcaccacg
     1741 aagatgatct gcatctggac cttcgtaccc tcaccttccg cttcacccaa ccgcgcggca
     1801 aggaaccacg ctcaaaaaag acgctcaaga attaccggga acgagggtcc ggcacggttc
     1861 gcggcgagcg tgatgctcat aaagacattg agatcaagtt ttgggaaacg gcagcagata
     1921 cagggatcac cgacgaagct gtcagggttt ccactggtcg gtttaaggca gcacttgatg
     1981 aactgaatga acaattgcaa agcagcaaaa atctgctcgg cgatgatatt actttgctgg
     2041 atattgcctg ggtaatttac gttaaccggc tggtccattg tggctatccg ctcgagcgct
     2101 tgcatccaaa cgtaaacgac tggttttggc cattgcgcaa tagcccggat tttgaccgcg
     2161 aaatgcatgt gccgcccgaa gttcaaaagg ccgtcgacga acgccacgaa gaacagcgaa
     2221 agttaggcac gaccttagcc gacgtggcag ggctttgatt taagcctaca atcagcgtcc
     2281 actacattcc tgaaagtaga gaatacccaa attacaaaaa gagtctgcta ttgatgcg
//
LOCUS       DASCNL010001022         2448 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002108080, whole genome shotgun sequence.
ACCESSION   DASCNL010001022 DASCNL010000000
VERSION     DASCNL010001022.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002108080"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            120..749
                     /locus_tag="QF359_13320"
     CDS             120..749
                     /locus_tag="QF359_13320"
                     /inference="COORDINATES: protein motif:HMM:NF012933.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HJO87934.1"
                     /translation="MSVKITKSTFAESAHELGQRDKDFARLVKDIGLPGLRSRQTGYS
                     TLLKIICGQQVSTSAARAIGGRLDAIEKPMKPETVLNLVPEKLRKVGLSGQKVNYAIG
                     IAEAVVCGEFSFRRVARMSDEDAIEEMIKLKGIGRWSAEVYLLFALRRPDLWPVDDLG
                     VIKGLMHLKGMKERPRREELVAMAEAWRPWRSVAARLLWHHINSVGVSR"
     gene            1485..>2448
                     /locus_tag="QF359_13325"
     CDS             1485..>2448
                     /locus_tag="QF359_13325"
                     /inference="COORDINATES: protein motif:HMM:NF041359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HJO87935.1"
                     /translation="MINPEVELFSDTKTRPGKAMLEAMMTAEVGDEQADEDPTTNALQ
                     KKVADLLGKEAALFVPSGTMCNQIAMAVHCQPGDEIIADKTAHIINFEASGPAVIARA
                     SIRPLDGVRGQFTVEQAQAGLRAGFRHAPDSKMIAVEQTANMGGGSIWPLEVLESLSE
                     LAKDNNLVTHMDGARLLNAVVASGVSEKDYAATVDTVWIDLSKGLGCPIGAVIAGSKE
                     FIEKAWPWKQRLGGSMRQSGILAAAGIYALDHLVDRLTIDHANARLLATRLAQIPGVQ
                     IDPLTVETNILIIDVTEASLSGPEISAQLLEKGIRMGATGPSGLR"
BASE COUNT          641 a          503 c          657 g          647 t
ORIGIN      
        1 cggcctccag ctaaattacg gataattaga tttagtttag ctactaaaac aaggttcgtc
       61 attactcggt tcggagtttc tgtgttgtcc tcgcatcatc gcctcgctaa cgtagtttta
      121 tgtcagtaaa gataaccaaa agtaccttcg ccgaaagtgc ccacgaactg gggcagcgcg
      181 ataaagattt tgccagattg gtcaaagaca tcggcttacc aggactacgc tcgcgccaga
      241 ctggttatag cacattgctc aaaattatat gtggccaaca agtttccact tcggcggcgc
      301 gagcaatcgg aggccgcctg gatgcgattg aaaaaccaat gaagccagaa acggtgctta
      361 acttagtccc ggagaaattg cgcaaggttg gcctcagcgg ccaaaaagta aattatgcta
      421 taggtatcgc ggaagcagtt gtctgtggcg aatttagttt ccgccgtgtc gcgcggatga
      481 gcgatgaaga cgcgattgaa gaaatgatca agctcaaagg aattggccgc tggtcagccg
      541 aggtttatct cttatttgca ctgcgccgtc ctgatctttg gccggttgat gatctcggtg
      601 ttatcaaagg cttgatgcat ctcaagggaa tgaaagagcg tccacgtcgt gaagaattgg
      661 tggcgatggc ggaggcgtgg cggccgtggc gcagtgttgc cgcccgcctg ttatggcatc
      721 acatcaattc tgttggtgtg tcccgatagc taactaatcg aatttaatgg tttcgatttc
      781 tggtaattta gccaagaagt atttgagaaa ttcctggtcg ctaatatgca gcggtctttc
      841 gattttaaat gccttgaatt gatttttttg gaagtcgcta aaactatcgt aagcattaaa
      901 aaggtatacg ctaatttgcg gtttaacctc gccagcccat ttgaagaaat gggcgccggc
      961 aatttgatct tcttgaacac agctgccgga attcatttgt tgggctttta ggataattgc
     1021 gtgcggatta tgggtttgca cggctttatc aatgaggtct gtataaatta gacaaatctg
     1081 atttaaatta tttgagaatt tgagatgact gatgtagcga atagcactcc tgatattacc
     1141 taggcgcgca cttaccaaat aatatttagc ggcttcagtc cgattaaatg atcctcgcaa
     1201 aaagattcca tgcattaaat cggtgaaatg agttccccga gggtctccct tctgagcgag
     1261 tttgaaaaat tcggtatgag cggtctgata atctcttttt cagaaaggct aattagccgg
     1321 catcttggtg gcgaataact aaggcgctaa ttatcaggac agcaagtcca acaattgcaa
     1381 gaattttttc tgtttgattc ataatgtaat agcttgtttg cgttggacga agagtacgaa
     1441 atcaggcaga aaggtgcaaa ggtttcaata gttttgagaa ttttatgatt aatcccgaag
     1501 tcgaactttt tagcgatact aaaacccgcc ccggtaaagc catgctggaa gcgatgatga
     1561 cggccgaagt aggcgacgag caggccgatg aagatccgac aactaatgcg ctgcagaaaa
     1621 aggttgctga tctgttaggc aaagaggcgg cgctgttcgt gccttcaggt acgatgtgca
     1681 atcaaattgc gatggcggtc cactgtcagc cgggcgatga aataattgct gataaaacgg
     1741 ctcacatcat caattttgag gcgagtgggc cggcagtgat tgcgcgggca tcgatcaggc
     1801 ctttagatgg agtgcggggg caatttacgg tcgagcaagc ccaagccgga ttacgtgccg
     1861 gctttcgaca tgccccagac tctaaaatga ttgcagtaga gcaaaccgcc aatatgggtg
     1921 gtggcagtat ctggccgctg gaagttttag aatctcttag tgaattggcg aaagacaata
     1981 acctcgttac tcatatggat ggtgcaagat tgttaaacgc ggttgtggcc tccggtgttt
     2041 ctgaaaaaga ttacgcggcc acagttgata cggtgtggat tgatctgtca aaagggttgg
     2101 gttgtccaat tggtgctgtg attgcgggct cgaaagaatt tatcgaaaag gcttggccgt
     2161 ggaaacagcg gcttggcggt tctatgcggc aatctggcat attggcggcg gcggggattt
     2221 atgcgcttga tcatctcgtt gaccgattaa ccatcgacca tgccaatgcc cggttattgg
     2281 caaccagatt ggcgcaaatt ccgggcgtgc aaattgatcc actgacggtt gagacaaata
     2341 ttctcattat cgacgttacc gaggcgagcc tgtcaggacc agaaatatcg gcgcagctgc
     2401 ttgaaaaagg catacgtatg ggggcgacag gaccgagcgg attgcggg
//
LOCUS       DASCNL010001023         4961 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002109740, whole genome shotgun sequence.
ACCESSION   DASCNL010001023 DASCNL010000000
VERSION     DASCNL010001023.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 4961)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4961)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4961
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002109740"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..632)
                     /locus_tag="QF359_13330"
     CDS             complement(<1..632)
                     /locus_tag="QF359_13330"
                     /inference="COORDINATES: protein motif:HMM:NF014215.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HJO87936.1"
                     /translation="MKKQSVEFRSENPADMIRADLYLPEGDGPFPVALMGGGWCYVKE
                     LAMPEYAKFIVDRGVAALVFDYRCLGKSDGEPRQHLDPWMQISDYRSAIDAVSYLNEY
                     EGLLDPERIGVWGISYSGGHSLIVGAIDWRVKCIVSHIPIIDGWYNSMRDHGTVGFRE
                     LTALVDKERRNRYLTGEHGTIPHSGDPKKEVVTWPHPETKPIFMKIKETVA"
     gene            928..1698
                     /gene="allE"
                     /locus_tag="QF359_13335"
     CDS             928..1698
                     /gene="allE"
                     /locus_tag="QF359_13335"
                     /EC_number="3.5.3.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR03214.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071522 - ureidoglycine aminohydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0010136 - ureide catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(S)-ureidoglycine aminohydrolase"
                     /protein_id="HJO87937.1"
                     /translation="MPYPKGFLESRAIIKPGVYTVIPPEGRVINSIPGFEGCQLTIIA
                     SPKHGASFVQYVGTVTPGGKTTALFVDDADVESFLFVMDGEGELDVSVGDQSEKLKAG
                     GYSFAPPENGIEFENTSSSPVRILLYKQRYVPLNDLKPWIVFSNINEVPENIYDEMEN
                     VFLRDLLPNDLAFDMNMHTLKFNPDACHSFVETHVQEHGAYMLGGQGMYLLGEDWLQV
                     KKEDFIWFGPFTQQGAYTTGREPFWYIYSKDMNRDAEI"
     gene            1747..2772
                     /locus_tag="QF359_13340"
     CDS             1747..2772
                     /locus_tag="QF359_13340"
                     /inference="COORDINATES: protein motif:HMM:NF012412.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87938.1"
                     /translation="MKLTKEFGPNDINNQIEATGIKGRHLTFIDDLSPNELENVCKTA
                     AMLEPFWRCGVPLLDGKVLCTQFFQPSTRTRFSHETAMSRLGGNVITESNPLVSSSVA
                     KGESLYDSLRVTSQYADVIVLRHPDDAVIDTINELGENSSPIISGGYGNVTHPTQGLL
                     DMYTAYRALGGDFKNMTVMIATPDLSRARSGQSFGLGLARMGAKLIYSGTTGLETSEV
                     IREKLDAMKANYTEVNDLTIKQQEELIADEGVDLVYLPGCSVKKGDPGREDFLKKMAE
                     FYFTLEGLQKIEKKSGKTVGLMHSLPRNEDEFDFAIDDSAHQLYFKQIGFSVPLRMSL
                     LANICGV"
     gene            2798..3808
                     /locus_tag="QF359_13345"
     CDS             2798..3808
                     /locus_tag="QF359_13345"
                     /inference="COORDINATES: protein motif:HMM:NF012913.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HJO87939.1"
                     /translation="MAIRPRIQLLSTGGTISGFGRTATETAYEYGQIDACDLVATVDG
                     LNHIADVQAETLFEVGSENLGPVQWFKLANRIEELTASDEVDGVVVTHGTDTLEEAAF
                     FLDLVCRPKKPVALTAAMRPATALSADGPANLYQAVLAISTLKLQGPEIFVVMNGQVI
                     PGWQVIKTDSVALSSFCAYPGGAVGQIVNSNLLANGDPGSSPIAGQFHDVLRKGLELP
                     NVDIISLRGGCGNRPILSWNGTDCKGLVIAGFGAGTMPDSLATKIAEISRSGCVVVVS
                     SRLSRVIVLSDTMSPGESDEIIPSGFLNPQKSALLLCLALAVGLNGSDIAKLFSNFSS
                     NL"
     gene            3832..4803
                     /locus_tag="QF359_13350"
     CDS             3832..4803
                     /locus_tag="QF359_13350"
                     /inference="COORDINATES: protein motif:HMM:NF009007.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HJO87940.1"
                     /translation="MNGTREIPDRLIIAVGGNAIHPAGIKGTSEEQVEIAGDTAHALL
                     PLLKLENELIITHGNGPAVGKVLMRQALALDRVVPMSLDICVANTQGATAYLLVQAFE
                     NALREVGNPRHVVGLVTQVEVDPDDPGFTNPTKPVGYFYSEDEAKGLADEMGWTMRED
                     AGRGWRMVVASPKPKHICDVSLVEALASRNTVVIAGGGGGIPVVRDEHGLRRGVEAVI
                     DKDLTTAHMANVLGVEEIMILTAVSRVATNFGEPNEQELDVVSLSEIQELMDAGHFPA
                     GSMGPKIEAAISFIKGGGKRAIIGHLNEALSALRGEAGTHIVPDGEA"
BASE COUNT         1260 a         1142 c         1295 g         1264 t
ORIGIN      
        1 gcaactgtct ccttgatttt catgaagatg ggtttggttt ccggatgcgg ccatgtcacc
       61 acctccttct taggatcacc agaatgtggg atagtgccgt gctcgccggt caggtagcgg
      121 ttgcggcgct ccttatccac cagcgctgtc agttcgcgga agcctaccgt gccatggtca
      181 cgcatggaat tgtaccagcc gtcaatgatc gggatgtgcg aaacgatgca tttcacccgc
      241 cagtcgatgg cgccgacgat cagggaatgc ccacccgaat aggatatacc ccagacaccg
      301 atgcgttccg gatcgaggag accctcgtat tcgttcagat aactgacagc gtcgatggcc
      361 gagcggtaat ccgagatctg catccacggg tccagatgct ggcgcggctc gccgtcgctt
      421 ttgcccaggc agcggtaatc aaagaccagc gccgccacgc cacgatcgac aatgaacttg
      481 gcgtattcgg gcatggccag ttccttcaca tagcaccagc cgccgcccat gagggcgacc
      541 ggaaacggcc cgtcgccttc cggcagataa agatcggcac gaatcatatc ggctgggttt
      601 tcgcttctga attctaccga ttgttttttc atggtacctc cctattcgtc tatttgttcg
      661 cgtgtggtct gcccctgtta agtggtccaa gttaaatgtt agcgcatagt gtgtctctgg
      721 tctattggaa cgattgattt aggtgctggc gacttgtagc cgagggcgct gtgtggtctg
      781 atataattca gacagagact ggcggtgcgc aacctaataa agaattttta actttcttca
      841 acatggcaag cgattgatct taatgcggcc taattggctg ttgagcaagt agttgaaatt
      901 gttgtctaaa aataaggaga aataaatatg ccatatccaa aaggatttct ggaaagccgt
      961 gccatcatta agcctggtgt ctacactgta attccacctg aaggcagggt cataaactct
     1021 attcccggtt ttgaggggtg ccaacttacg atcatcgctt cgccgaaaca cggtgcgagc
     1081 tttgtccaat acgttggaac agtcacgcca ggtggaaaaa caacggccct gttcgtcgat
     1141 gatgcagacg tcgaatcctt tctttttgta atggatggcg aaggcgaact tgatgtttcc
     1201 gtaggcgatc aatccgaaaa gctaaaagcc ggaggttact cttttgcgcc accggaaaat
     1261 ggtattgaat ttgaaaacac gtcatcttca cctgttcgca tccttctcta caagcagcgc
     1321 tatgttccgc tgaacgacct gaaaccttgg attgttttca gtaacattaa tgaagtccct
     1381 gaaaatatat acgacgagat ggagaatgtt ttcctacgtg atctattacc aaatgaccta
     1441 gcgttcgaca tgaacatgca tacgctaaaa ttcaatcctg acgcttgcca ttcgttcgta
     1501 gaaacgcacg ttcaggaaca tggtgcctac atgcttgggg ggcaaggtat gtatctactg
     1561 ggcgaggatt ggcttcaggt gaaaaaggaa gacttcattt ggtttggccc gtttacgcaa
     1621 caaggagctt ataccaccgg tcgtgagcct ttttggtaca tttacagcaa agatatgaac
     1681 cgggatgcag aaatctaggt atcagcaaat caagtatact gaaattatag aatggattga
     1741 agaacgatga agctaactaa ggaatttggc cccaatgata ttaacaatca aattgaggca
     1801 accggcatta aagggcgcca cctaactttt attgatgacc tatcgcctaa tgaactcgaa
     1861 aacgtatgca agaccgctgc gatgttggaa ccgttttggc gctgcggagt gccgttgctt
     1921 gacggcaagg tgctctgcac ccagtttttc caacccagca ctcgtacgcg attcagccat
     1981 gaaaccgcaa tgtcgcggct cgggggaaac gtcattacgg aatctaaccc actggtcagc
     2041 tcatcggttg ccaagggtga gtcgttgtat gattcgcttc gggtgacctc gcagtatgcc
     2101 gacgttattg tgctgcgtca tcccgacgat gccgtaatcg atacgattaa cgaattgggt
     2161 gaaaattctt cgccaataat cagtggcggc tatggaaatg taactcatcc gacccaaggc
     2221 ctgctcgata tgtacacggc ctatcgagcg ctaggcggag atttcaaaaa catgaccgtt
     2281 atgattgcaa cgcccgatct atcgcgtgct cgttccggtc agtcctttgg tctcggcctc
     2341 gctcgcatgg gcgccaagct gatttattcc ggtaccacgg gcctggaaac gtctgaagtc
     2401 atccgcgaaa agcttgatgc catgaaagcg aattacaccg aagtcaacga tttgacgatc
     2461 aaacagcaag aagaattaat tgccgatgaa ggcgtcgatc tcgtttacct tccgggttgc
     2521 tcggttaaga agggtgatcc gggccgtgaa gatttcctga agaaaatggc ggaattctac
     2581 tttaccctcg aaggacttca aaagatcgaa aagaagagtg gtaagacggt tggacttatg
     2641 cattcgctac cgcgcaacga agacgaattt gatttcgcaa tcgatgacag cgcccatcag
     2701 ttgtacttca agcaaattgg attctctgta ccgcttcgca tgtcgttact cgcaaatatt
     2761 tgcggcgtct aggatcaatc gtgggagcga agagaatatg gcgataagac caagaattca
     2821 attgcttagc accggaggaa cgatttccgg ttttggtcgt actgcgactg aaaccgctta
     2881 cgaatatggt caaattgatg cctgcgattt ggttgctacc gttgatggcc tgaaccatat
     2941 agcggatgtt caggccgaaa ccctattcga ggtaggttcc gaaaatctgg ggccagttca
     3001 atggtttaaa cttgccaaca gaattgaaga attaaccgcg tcagacgaag tcgacggtgt
     3061 tgtcgttacg catggtactg acacacttga agaggcggca ttttttctag atcttgtgtg
     3121 tcggcccaag aagcccgtgg cattgactgc tgcaatgcgt ccagcaactg ccttgagtgc
     3181 ggatggcccc gcaaatcttt atcaagcagt attagctatt tccaccctaa aactccaggg
     3241 cccagaaatt tttgtcgtca tgaacggcca ggtcattcca ggatggcagg ttatcaagac
     3301 cgactctgtg gccctgagct ctttttgtgc ttatccaggc ggagctgtgg ggcagatagt
     3361 aaacagcaac ctgctggcaa acggtgaccc cggatcatcg ccgatagccg ggcagttcca
     3421 cgatgttttg cgaaagggtt tagaattacc gaacgtggat ataatctcgc ttcgcggggg
     3481 gtgcggcaat cgcccaatct tgagttggaa tggaacggac tgcaagggac tcgtcattgc
     3541 cggatttggt gccggtacga tgccagattc tctggcgaca aagatcgctg aaatttcgcg
     3601 gtcgggatgc gttgtcgttg tttcctcacg gctaagtcgc gttattgttt tatccgacac
     3661 gatgtctccc ggcgaaagcg atgaaattat accttcggga tttcttaacc cccaaaaatc
     3721 agcactcctc ctgtgtttgg cattggcggt tggtcttaat ggttcagata ttgcgaagtt
     3781 attttctaat ttttcatcta atctctgaaa ttaaattgag aactttatac aatgaacgga
     3841 actagagaga ttccagatcg cttaatcatt gctgtcggtg gcaacgcaat tcatccggca
     3901 ggcatcaagg gcacatcaga agagcaggta gaaattgcag gcgatactgc ccatgcattg
     3961 ttgcctttat tgaaactcga aaacgaattg ataattactc atggaaacgg ccctgccgtc
     4021 ggcaaggtgc taatgcgtca ggctcttgca cttgatagag tcgtaccgat gtcgctagac
     4081 atttgtgttg caaatactca gggcgcgaca gcctatttac tcgtgcaggc gtttgagaac
     4141 gcacttcggg aagtgggtaa tccgcggcac gtagttggtt tggtgacgca agtcgaggtc
     4201 gatcctgatg atcctggttt taccaatccc actaaaccgg tgggatattt ctatagcgag
     4261 gatgaggcta aaggccttgc ggatgaaatg ggatggacta tgcgagagga cgctggacgt
     4321 ggttggcgta tggttgtagc gtcacccaag cccaaacaca tttgcgacgt ttctttagtt
     4381 gaagctctag caagccgcaa tacagtggtt attgcaggcg gtggcggtgg aattccggtc
     4441 gtgcgggacg agcacggttt gcgtcgaggt gtagaagccg ttatcgacaa ggatttgacg
     4501 acagctcaca tggcgaatgt attgggcgtg gaggaaatca tgattttaac ggcggtttct
     4561 cgtgttgcga ccaattttgg agagccaaat gaacaagaat tggatgttgt aagtctctcg
     4621 gagatccaag aattaatgga cgcgggtcat tttccagccg gtagcatggg accaaaaatc
     4681 gaagctgcaa taagctttat caaaggtggc gggaaacgcg caattattgg ccatttaaat
     4741 gaagctctat ctgccttacg cggtgaagcc ggcacccata ttgtgccgga cggtgaggcc
     4801 tagctcaaac cgtaatgatg cggtaatcag ccaatttatc atccacaatt atggccggtg
     4861 taaattaacc atgatagtgt aataaccatg atagtgtaat aatgaaggcg aagtgcaacg
     4921 ggatctaaca gcgcgcatcg gccacaaaat atagtgagat g
//
LOCUS       DASCNL010001024         2394 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002110412, whole genome shotgun sequence.
ACCESSION   DASCNL010001024 DASCNL010000000
VERSION     DASCNL010001024.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002110412"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(456..677)
                     /locus_tag="QF359_13355"
     CDS             complement(456..677)
                     /locus_tag="QF359_13355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87941.1"
                     /translation="MSKIKLFLTAGLIIVILIFVFKVEIVEVGLDEPGYTYIGSASSG
                     VLRVNAETGATVPCMISDGNKARCLSWKK"
     gene            complement(763..1611)
                     /gene="bcrD"
                     /locus_tag="QF359_13360"
     CDS             complement(763..1611)
                     /gene="bcrD"
                     /locus_tag="QF359_13360"
                     /EC_number="1.3.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018522 - benzoyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA reductase subunit D"
                     /protein_id="HJO87942.1"
                     /translation="MVKTIGIDVGTGVVKTVLFEVDGEKNEWIGKKAERIRKRDPYKL
                     AEDSMDELLKENGVTRDDIDYTATTGEGESLEFHTGHFYSMTTHARGAIYLNPESRSV
                     LDVGALHGRAIRIDEHGKVLEYRMTSQCASGSGQFLENIARYLGITLEEIGELSQQAD
                     DPEVVSGICAVLAETDVINMVSRSISAPNILKGIHISMSNRLLKLLRATKVMEGDVMV
                     TGGLALDTGLVAAMAEGVSDPKNKVNVTIKSDPDSIYAGAIGAALWGGFRYEKLAKVE
                     ELKQAS"
     gene            complement(1611..>2394)
                     /locus_tag="QF359_13365"
     CDS             complement(1611..>2394)
                     /locus_tag="QF359_13365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HJO87943.1"
                     /translation="MNNKFTRAMENAVEELSALILNADDFATAMTEGLDIELEETYVV
                     GTGYGRVRLPFPKEHIRSEILCHGLGAHIMYPKTRTVLDIGGQDTKAIQVDTTGIVEN
                     FQMNDRCAAGCGRYLGYIADEMNMGVHELGPLDSKATKVAKINSTCTVFAGAELRDRL
                     ALGEKREDVLAGLHRAIILRALSIISRSGGITDEFTFTGGVANNEAAVKELKKLIKEN
                     YGEVTINIDPESIYTGALGAAEFSRRAAKGDLTGAEEQLGAA"
BASE COUNT          634 a          599 c          541 g          620 t
ORIGIN      
        1 agttcttatt caaacagcat aaaatgcctc cggaagcttt ccaggcactt tcctaaaaac
       61 acaataatgt ggaactggtt gaatttatgc gggtttggag ttccgacgca ggatttcaga
      121 aatcagaaat tgagtcggaa ctaaaactta agcacgacca ttttgtgcag atcgatcaag
      181 cgctcgcagg caaatattgg ttggtagaca atacattttc gctgtccgat attgcctggt
      241 atccaatgtc agacggctgg atctcatgca ttaacagctt gagttacacg tcaatctcaa
      301 ggagtggtat gagcgcttcc aagctaaacc aagctatatc aaggggatta gtgagttcga
      361 gattccgcca gcattggctg cctttaatgc ctacagttta gagcgcgccg agcaaagtac
      421 cggggtcaaa tcatttaagc ccctcgcggc ttaagttatt ttttccagct caaacaccga
      481 gccttattgc cgtcagagat catgcaggga acggtagcgc cagtttccgc gttgacccta
      541 aggacaccgg acgaggccga accgatataa gtatagccgg gttcatccag accgacctcc
      601 acaatttcaa ctttgaacac aaatattaga atgacgatga tcaatccagc cgtgaggaat
      661 aatttaattt tgctcatgcc gatttctaac atgacttcga gctaggcaca aaaaaagcct
      721 gaccaataat gaccaggcct tttcgataaa atattatcgg ctttaagagg cttgttttaa
      781 ctcttccact ttggctagtt tttcatagcg gaagccgccc caaagtgcgg caccaatggc
      841 gccggcatag atggagtccg gatcactttt gattgtgaca ttaaccttgt tctttggatc
      901 agaaacacct tcggccatgg cagcaaccag gcctgtatcc aaggccaagc caccagttac
      961 cataacatca ccctccatca ccttggttgc ccgcagcagt ttgagaagcc ggttggacat
     1021 ggaaatgtga atgcctttca aaatatttgg agccgaaata ctacgcgaca ccatgttgat
     1081 cacatcggtt tcggccaaaa cagcacaaat acctgacacc acttccgggt catcggcttg
     1141 ttgcgataat tcgccaattt cttcgagtgt aatgccgaga tagcgggcaa tgttttccaa
     1201 gaattggccg gaaccagagg cacattggct ggtcatccgg tattcaagga ccttaccgtg
     1261 ttcatcgatg cggattgccc ggccatgcag ggcgcccaca tccaacacag aacgtgattc
     1321 tggattgaga taaatcgccc cacgcgcatg ggtcgtcatc gaataaaagt gaccggtatg
     1381 aaattcaaga ctttcgcctt cacccgttgt agcagtgtaa tcaatatcat cacgggtcac
     1441 accattttcc ttgagcaact catccatgct gtcttcggcg agtttgtaag ggtcacgttt
     1501 gcggatgcgt tccgcttttt taccaatcca ttcgtttttt tcgccatcga cctcaaaaag
     1561 aactgtcttt acaacaccgg tgccgacatc aattccaatt gttttaacca ttatgctgct
     1621 cctaactgtt cttctgcacc cgttagatca ccttttgctg cacgacggga aaattcggcg
     1681 gcgcccaagg caccagtata aattgattcg ggatcaatat taatggtcac ttcaccatag
     1741 ttttccttaa tcaatttttt gagttccttg accgcggctt cgttattggc aactccaccg
     1801 gtgaaggtga attcatcggt gataccgcca gatcgggaaa tgatggacaa ggcgcggaga
     1861 atgatggccc gatgtaatcc agccagcacg tcttcacgct tttcgcccaa agccaggcga
     1921 tcgcgcaact cagcgccagc aaacacggtg caggttgagt tgattttggc gaccttggtt
     1981 gctttggaat cgagtggacc aagttcatgg acacccatat tcatctcgtc ggcgatatag
     2041 ccgagataac ggccacaacc tgcggcacaa cggtcattca tttggaaatt ttcaacaata
     2101 cctgtggtat ccacctggat agccttggtg tcctgaccgc caatgtcgag aaccgtacgg
     2161 gttttcggat acataatatg tgcacccaaa ccgtgacaga gaatttccga acggatgtgc
     2221 tctttcggga aaggtaaacg cacacgccca tagccagtac caacgacgta ggtttcctcg
     2281 agttcaatgt cgagaccttc agtcatagca gtagcaaaat cgtctgcgtt cagaataaga
     2341 gcggataatt cctcgactgc attctccatg gcacgggtga atttattatt catg
//
LOCUS       DASCNL010001025         2224 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002113463, whole genome shotgun sequence.
ACCESSION   DASCNL010001025 DASCNL010000000
VERSION     DASCNL010001025.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002113463"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="QF359_13370"
     CDS             complement(<1..735)
                     /locus_tag="QF359_13370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HJO87944.1"
                     /translation="MSKIDYSQKIPNNVDLFDDRRLQRALENWQPAYLDWWNELGPVE
                     SHDYEVFLRTAIDVSAKGWAHFDMVRMPDYRWGIFLADKEEDRKVNFGVHKGEAAWQE
                     VPGEYRAELRRLIVTQGDTEPASVEQQRALGRTCPSLYDLRSLFQVNVEEGRHLWAMV
                     YLLHAYFGRDGREEAEEMLQRHSGDVDKPRILEAFNIPTTDWLSFFCFTYFQDRDGKF
                     QLSALAVSGFDPLSRTCNFMLTEEAHH"
     gene            complement(738..>2224)
                     /gene="boxC"
                     /locus_tag="QF359_13375"
     CDS             complement(738..>2224)
                     /gene="boxC"
                     /locus_tag="QF359_13375"
                     /EC_number="4.1.2.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2,3-epoxybenzoyl-CoA dihydrolase"
                     /protein_id="HJO87945.1"
                     /translation="DATQRLRFEHPEIKSVIITSAKDRIFCAGANIAMLGTSTHAHKV
                     NFCKFTNETRNGIEDSTANSDQKYICVVNGTAAGGGYELALATDHIMLIDDGLSTVSL
                     PEVPLLAVLPGTGGLTRVVDKRNVRRDHADYFCTLNEGLKGKRAKQWNFVDELVPRSK
                     LIETAKERAEEFAKDSSRPDDAIGIELTPLKREITGDEINYSNISVKIDRDGLTAEIT
                     VHGPEKEPEQDATAIYAAGVDFWPLAFAREFDDLILHLRTNENKITTWVFKTEGNADF
                     VAAADQALIGNADDWLVHEITLYLKRTFKRLDVSSRSVITLVEPGSCFTGTLMELVLA
                     ADRSFMLDGTFEGSNVAAATLQPTEMNFGALPMCNNLSRLQTRFLNEEDKIAGIKAEI
                     GNELDTEAAENLGLVTFIPDDIDWEDEVRIAIEERASYSGDALTGMEASLRFAGPETL
                     ETKIFGRLSAWQNWIFQRPNAVGDEGALKLFGTGKQANFDIKRV"
BASE COUNT          525 a          570 c          573 g          556 t
ORIGIN      
        1 atggtgggct tcttcagtta gcatgaagtt gcaggtccgg gacaatggat caaagccgga
       61 tactgccaag gcgctcagct ggaacttgcc atcacggtct tggaaatagg tgaagcagaa
      121 gaaagacagc caatccgtcg tcggaatgtt aaaggcttca aggatgcgag gtttgtcaac
      181 atcaccggaa tggcgttgca gcatttcctc agcttcttcg cggccatctc gaccaaaata
      241 agcgtgcagc aaataaacca tcgcccagag atggcggcct tcttcgacgt tcacttgaaa
      301 caggctgcgc agatcataaa gcgatgggca ggtgcgaccg agtgcgcgct gctgctcaac
      361 cgaagccggt tcagtatcgc cttgtgtaac aatcaggcgg cgtagttcag cgcggtattc
      421 gccgggtact tcctgccagg ccgcttcgcc cttatggacg ccgaaattga ctttgcggtc
      481 ctcctcttta tcggccaaga aaatgcccca gcggtaatcc ggcatccgca ccatatcaaa
      541 atgggcccag cctttggcgc tgacatcaat agcggtgcgc agaaacactt catagtcgtg
      601 actttcgacc gggccgagtt cgttccacca atcaaggtag gccggctgcc agttttccag
      661 cgcccgctgg aggcggcgat catcaaacag gtcgacgttg tttggaattt tttgtgaata
      721 atcaatcttg ctcataatta tactcgcttt atatcgaaat tagcttgttt gccggtgcca
      781 aacagtttga gggcaccttc atcaccgacc gcattggggc gctggaaaat ccagttttgc
      841 cacgcgctca aacggccgaa tattttagtt tctagggttt ctggtccagc gaagcggaga
      901 ctagcttcca tgccggtcaa ggcatcgccg gaatagctgg cgcgttcttc aatggcgata
      961 cgaacttcat cttcccaatc gatgtcatca ggaataaagg tgacgaggcc gagattttcg
     1021 gcggcttcgg tatccaactc attgccaatc tcagctttga taccggcaat tttatcttcc
     1081 tcattgagga acctggtttg cagtcggctg agattattgc acattggcag cgccccgaaa
     1141 ttcatttcag tcggttgcag tgttgccgcg gcaacgttgg aaccttcgaa agtgccatcg
     1201 agcataaagc tgcgatcggc agccaagacc agttccatca gcgtgccagt gaagcagcta
     1261 cccggttcaa ccagcgtgat aacgctgcgg gatgaaacat ccaagcgttt gaaagtccgt
     1321 ttaagataca acgtgatctc atgaaccagc caatcgtcgg cattgccgat caaggcttga
     1381 tcggcagcag caacgaaatc tgcgttacct tctgttttaa agacccaggt tgtgatcttg
     1441 ttttcattgg tccgcaggtg cagaattaaa tcatcaaatt ctcgggcgaa ggcgaggggc
     1501 cagaaatcaa caccggcggc ataaattgcc gtggcgtcct gttcaggttc tttctcagga
     1561 ccatgcacgg tgatttctgc ggtgagccca tcccggtcga ttttgaccga aatgtttgag
     1621 tagttaatct cgtcacctgt gatttcacgt ttcagcggtg ttagttcaat acctatagca
     1681 tcgtccggac gcgacgaatc tttggcaaac tcctcagccc gttctttggc ggtttcgatg
     1741 agcttcgaac gcggcaccaa ttcatcaacg aaattccatt gcttagcgcg cttgcctttt
     1801 aagccttcgt taagggtgca gaagtaatca gcgtgatcgc ggcgcacgtt gcgcttgtca
     1861 actacccgcg tcagcccgcc agtacccggt aaaactgcca ataacggaac ttccggcagg
     1921 gatacggtgc tcaagccgtc atcaatcaac ataatatggt cagttgcaag agcgagttca
     1981 tagccgccac ctgctgccgt accatttacc acgcaaatat atttctgatc agaattagcg
     2041 gttgaatctt cgataccatt ccgggtttcg ttggtgaatt tacagaaatt gaccttgtgg
     2101 gcatgggtgg aggtaccgag catggcgata ttagcgccgg cgcaaaatat gcggtctttt
     2161 gctgaggtga tgatgacgct tttaatttcc ggatgctcaa agcgtaaacg ctgggtcgca
     2221 tcgt
//
LOCUS       DASCNL010001026         1520 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002113641, whole genome shotgun sequence.
ACCESSION   DASCNL010001026 DASCNL010000000
VERSION     DASCNL010001026.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002113641"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(144..>1520)
                     /locus_tag="QF359_13380"
     CDS             complement(144..>1520)
                     /locus_tag="QF359_13380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HJO87946.1"
                     /translation="GFPGELVDDWHDKAIAKFGELLESQRALKVYMDACVKCGACADK
                     CHYFLGTGDPKNMPVARQDLMRKIYRRYFTWTGKWFPWLVGAKDLTRDVLDEWYSYFH
                     QCSQCRRCSVYCPYGIDTAEFSMAAREIMDHVGMGQKYCNEIIGKVHDIGNNLGLPEK
                     ALGATLEDLEEDLEDDTGVAVRLPLDEKGADILLITPSADFFAEPHVDGLMGYAKVFH
                     QAGVSWTLSSQASEAANFAMFIGSHDQMGKIAERIKDAAMELDVKRIIVGECGHAWRV
                     AYNFWDTLVGPFDFLDPAYPIPQHICEFTYDLIQKGELTFDKSANDHMTLTFHDSCNV
                     SRASRMGDIPGGQFKIPREIIKACCNNYVDMATDTIHENTFCCGGGGGLLTDDLIELR
                     AKGASPRMGAYEQVVKHHGVTHMAAICAICKTQFSKVMPMYGFAMDDIVGVHQLVNNA
                     LILDGLGE"
BASE COUNT          393 a          411 c          352 g          364 t
ORIGIN      
        1 gctttctcca aggcctttgg taccttcggt agaggcacgc catctgagcc atggactgac
       61 gaaccggata gcagtacggt cgttgccaaa atcgatagag ccaattggta tcccagcgtc
      121 cgcatgatta attcacctca cccttattca ccaaggccat caagaatgag ggcgttgttg
      181 actaattgat gcacgccaac aatgtcatcc atggcgaagc cgtacatcgg catcactttt
      241 gaaaattgcg tcttacagat ggcgcaaatt gccgccatat gggtaacgcc atgatgttta
      301 accacttgtt cgtaagcgcc catgcgcggg ctggcgccct tagcgcggag ttctattaaa
      361 tcatcggtca ataagccgcc gccgccgccg caacaaaatg tgttttcgtg aatggtgtcg
      421 gtcgccatat caacataatt attgcagcac gccttgataa tttcccgagg tatcttgaat
      481 tgcccccccg gtatatcacc catccgcgag gcccgtgaca cattgcagga atcatgaaac
      541 gtcaaagtca tgtgatcatt agctgatttg tcaaaagtga gttcaccttt ttgaatcagg
      601 tcataagtga actcacagat gtgctgggga atcggataag ccggatcaag aaagtcaaac
      661 gggccgacca aagtatccca aaaattataa gcgacccgcc aggcatgacc gcattcgcca
      721 acaattatcc gcttaacgtc caattccatg gcagcgtctt tgatgcgctc ggcgatttta
      781 cccatttgat cgtgggagcc gatgaacatg gcaaaattgg cggcttctga agcttgggaa
      841 cttagtgtcc agctaacacc cgcctgatgg aaaactttgg catagcccat caagccatca
      901 acatggggct cggcaaaaaa atcggcgctc ggcgtaatca gcagaatatc ggcacccttc
      961 tcatccagcg gcaaacgcac ggcaacacca gtatcatctt ccaagtcttc ttccaggtct
     1021 tcgagtgtgg ctcccagggc tttttccggc aggcctaaat tgttaccgat atcgtgaacc
     1081 ttgccgatga tttcgttgca atatttttgg cccatgccga catggtccat gatctcgcgg
     1141 gccgccatgg aaaattcagc agtgtcgatg ccgtagggac aatagaccga gcaacgccgg
     1201 cattgggaac attggtgaaa atagctgtac cattcatcaa gtacgtcgcg ggtcaggtct
     1261 ttggccccaa ccaaccaggg aaaccacttg ccggtccaag tgaaatagcg ccggtatatt
     1321 ttcctcatca aatcctgccg cgccaccggc atatttttag gatctccggt acctagaaag
     1381 taatggcatt tatccgcgca ggcaccgcat ttgacacaag catccatata gactttaagg
     1441 gcgcgttgac tctccagtaa ttcaccgaat ttggcaattg ccttatcatg ccaatcgtca
     1501 accaattcac ccggaaaccc
//
LOCUS       DASCNL010001027         1565 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002114737, whole genome shotgun sequence.
ACCESSION   DASCNL010001027 DASCNL010000000
VERSION     DASCNL010001027.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002114737"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="QF359_13385"
     CDS             <1..200
                     /locus_tag="QF359_13385"
                     /inference="COORDINATES: protein motif:HMM:NF016836.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HJO87947.1"
                     /translation="TAQVKSKMTFDGDIFSINYVVETVNGTVYLIGIAQNEAEHKRAK
                     QHAASVKFVRNVISHVRVKNY"
     gene            228..1169
                     /gene="gshB"
                     /locus_tag="QF359_13390"
     CDS             228..1169
                     /gene="gshB"
                     /locus_tag="QF359_13390"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HJO87948.1"
                     /translation="MSLKVAIQMDPIDVIDISADSTFVMALEAQARSHSLYHYLTQDL
                     ALKSGRVMAGARSLEVRPEEGNHFTLGKQQWIDLTTVDVVLMRQDPPFDMSYITATHL
                     LEHIHPETLVVNDPVHVRNAPEKLFVTHFPDLMPPTLITTNQEQILAFRTEHQDLIIK
                     PLFGNGGAGVFHIGPEDENLNSLLELFTGLYREPIIVQRYEPAVRQGDKRIILIDGKA
                     AGALNRVPTVGESRSNLHVGGTALQSTLTPREEEICTAIGPTLKERGLIFVGIDVIGD
                     YMTEINVTSPTCLQEINRFDGVKLEADIWDAIEAKLS"
BASE COUNT          411 a          400 c          376 g          378 t
ORIGIN      
        1 tcaccgccca ggtgaaatca aagatgacct ttgatggaga tatcttttcg atcaattatg
       61 tggtcgaaac ggtcaacggc acggtttatt tgatcggcat tgcccaaaat gaagctgaac
      121 acaaacgcgc caaacaacac gccgccagtg tcaaatttgt ccgcaatgtc atcagccatg
      181 tgcgggtcaa aaattattaa tttaacgcac cagccggaaa aaataatatg agcctaaaag
      241 tcgccatcca aatggaccca atcgatgtga tcgatatttc cgccgacagc actttcgtaa
      301 tggcgctcga agctcaggcg cggagccatt cgctctatca ttatctgacc caggatctag
      361 cgctcaaaag cggccgggtg atggcggggg cccggtcatt ggaagttcgc ccggaagaag
      421 gtaatcattt tactttgggc aagcaacagt ggattgacct caccacggtc gatgttgtgc
      481 tgatgcgcca ggacccgcct ttcgatatgt cctatattac ggcgactcat ttgctggagc
      541 atattcaccc cgaaaccctt gtcgtcaatg acccggttca tgtcagaaat gcgccggaaa
      601 aactttttgt cactcatttc ccagacctta tgccgccaac cctgatcacc accaatcagg
      661 aacaaatcct ggcctttcgc accgagcatc aagacctcat tattaagccg ctgttcggta
      721 atggtggggc tggggtcttt cacatcggcc cggaggatga aaacctgaat tcattgctgg
      781 aacttttcac agggctttac cgggagccga ttattgtcca gcgctatgaa cctgctgtcc
      841 gccagggcga caagcgcatc atcctgatcg atggtaaggc ggccggtgcc ttaaaccggg
      901 tgccgacggt aggtgaatcc cgctctaacc tccatgtcgg cggcaccgcc ttacaaagca
      961 cgctgacgcc ccgtgaagag gagatttgca cggccatcgg gccaacgctc aaagagcgcg
     1021 gcttgatctt tgtcggcatc gatgtgatcg gcgattacat gaccgagatc aacgtcactt
     1081 caccgacgtg tttgcaggag atcaatcgct tcgatggggt caagctcgaa gccgatatct
     1141 gggatgccat tgaagcgaaa ttgagttaat ttatctggcg gctaaattaa ggggacatat
     1201 acttggtacg tgtccccatt aattcgcaaa caattagaca caaagttcac aaaatatagt
     1261 taatcgattg tcgattaaat tttaataaca actaccgtaa tgcgcggact tgatccgtgt
     1321 atccatttat ccacaccccc accttaatcc tcacccatca agggggataa aaacaatttc
     1381 acccaaccgt cattccggcg aaagcgggaa tccaggaata ctgatcaagt ccggggtgac
     1441 aaaataggta aagccctccc ccttaacctg cttgtgtgta gcttcgacag aggtaggtgg
     1501 gggagggttg ggtaggggtg cttttatttt aatctttagc tgtaaaacta aattgctcta
     1561 cactt
//
LOCUS       DASCNL010001028         1986 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002116086, whole genome shotgun sequence.
ACCESSION   DASCNL010001028 DASCNL010000000
VERSION     DASCNL010001028.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1986)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1986)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1986
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002116086"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="QF359_13395"
     CDS             complement(<1..569)
                     /locus_tag="QF359_13395"
                     /inference="COORDINATES: protein motif:HMM:NF016269.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HJO87949.1"
                     /translation="MTEAVETLNILKNRKDLDSFNAGLKKAAGVAIFPSVYKAGFFVG
                     AEGGNGLMIGRDAKGNWGYPAFYTLASASWGLQFGGQKSGVVFIIRRPGAVEALMKHQ
                     GKISADVNVAAGNIGSGLEGSITTNFGPDIIAYSDSKGLFGGVSLEGSAMVRRNDLNL
                     EYYGGEVEPRAILIDFTHRNPQADELRRSL"
     gene            992..1933
                     /locus_tag="QF359_13400"
     CDS             992..1933
                     /locus_tag="QF359_13400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HJO87950.1"
                     /translation="MAFRKRILITGGAGFIGSHLSELLVNAGHDVICLDNYFTGTKDN
                     IAPLLDHTNFELMRHDVTFPLYVEVDEIYNLACPASPIHYQYDPVQTTKTSVHGAINM
                     LGLAKRTGAKIFQSSTSEVYGDPTVHPQSEDYRGNVNPIGPRACYDEGKRCAETLFFD
                     YYRQHGLKIKVARIFNTYGPRMHPYDGRVVSNFIVQALRGKPITIYGDGSQTRSFCYV
                     DDMVAGFVRLMDAPDDVTGPINLGNPGEFTILQLAKLVVKMTDAKSELIYEPLPEDDP
                     LQRCPNITLAKEKLNWQPNVQLEQGLEKTITYFSETI"
BASE COUNT          516 a          486 c          448 g          536 t
ORIGIN      
        1 agactgcgtc gcagctcatc ggcttgcgga ttccgatggg taaaatcgat gagaatggcg
       61 cgcggttcaa cttcaccgcc gtaatattct aagttcagat cgttgcgccg caccatcgcc
      121 gagccttcaa gcgatacccc gccaaacaaa ccttttgaat cgctataggc aataatatcc
      181 ggtccgaaat tggttgtaat agagccttcg agtccgctgc caatattccc cgcggctaca
      241 tttacatcgg ccgatatttt accttgatgt ttcattaagg cttcgaccgc gcccggtctt
      301 cggatgatga aaacgacacc cgatttctga ccgccgaatt ggaggcccca actggctgaa
      361 gccaaggtgt aaaatgccgg atagccccaa ttacctttgg catcccggcc aatcatcaag
      421 ccattgccac cctcggcacc gacgaaaaag ccagccttgt agacagatgg aaagatagct
      481 acaccggcag ccttttttag cccggcatta aagctatcaa gatctttgcg attcttaagt
      541 atattcaatg tttcaacggc ctctgtcacc agggcttccg actttagtac tttgggtccg
      601 ctggcgcatg cggccaggcc caaacttagc gccgtaagca gcgtaataag tttcgttcga
      661 cggctgataa atcctaacat tggctgactt cccccataaa ttcttagccg cgactatcct
      721 gatctagtca ataaagtcca agttttgcga acggcgtttg gtcatttctc atcactggat
      781 aaaattgcag gtgcaaattg cccatttaac cgatttttta taccgaaaaa cacttaacta
      841 actataaacc gccgttcttt aatatgacta taaactgaaa tgatggcgat aagaatattt
      901 tcttaccaga tcggattttc aatggtagtg tcgccagctc tatttgtaac tggacgtttt
      961 ttgggaaatc taaccaagtt atggaacttt aatggcattt cgtaagcgaa ttttaattac
     1021 cggcggcgcc ggctttattg gctctcattt aagtgaatta ttggtcaatg cgggccacga
     1081 tgtcatttgt ctcgataatt actttaccgg tacaaaggat aacattgcgc cgctgctgga
     1141 tcacaccaat ttcgaactaa tgcgccatga cgtaactttc ccgctctatg ttgaagttga
     1201 tgagatttat aatcttgcct gtccagcttc gcccattcat tatcaatatg atcccgtgca
     1261 gacgaccaag accagtgtgc atggggcgat caatatgctc ggactagcca agcgcaccgg
     1321 cgccaaaata tttcaatcct ccaccagtga agtctatggt gatcccacag ttcatccgca
     1381 aagcgaagat tatcgtggta acgtcaatcc gattggcccg cgcgcctgtt atgacgaagg
     1441 taaacgctgc gctgagactt tgttttttga ttattaccgc cagcacggac tgaaaattaa
     1501 ggtcgcccgt atcttcaata cctatgggcc gcggatgcac ccgtacgatg gtagggtggt
     1561 ctccaacttt attgtgcaag cgctgcgggg taaaccgata acaatttacg gcgatggtag
     1621 ccagacccgg tcattttgct atgtcgatga tatggtggca gggttcgtgc ggctaatgga
     1681 tgcgccggat gatgtaaccg ggccgattaa tctcggtaat cccggtgagt ttacgattct
     1741 acaattggcg aagctggtgg ttaaaatgac cgacgccaaa tctgaactaa tttacgagcc
     1801 gttgcctgag gatgatccgc tgcaacgttg tccgaacatt accttagcta aggaaaagct
     1861 taattggcag ccaaatgtac agttggaaca gggtcttgag aaaaccatca cctacttttc
     1921 tgagacgatt tagtcgtttg ttgaattaat gtgtctcaag agacatttca aaaactaacc
     1981 cgtcca
//
LOCUS       DASCNL010001029         1758 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002118177, whole genome shotgun sequence.
ACCESSION   DASCNL010001029 DASCNL010000000
VERSION     DASCNL010001029.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002118177"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(74..388)
                     /locus_tag="QF359_13405"
     CDS             complement(74..388)
                     /locus_tag="QF359_13405"
                     /inference="COORDINATES: protein motif:HMM:NF013607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HJO87951.1"
                     /translation="MSDLPATVLFACTMNSVRSAMAEGILKSLHGDRIYVDSAGVRAG
                     EPDGFMIEVMAEIDIDLSNHASKTLSTLDDTSFDLIVFLSPKAQHAAVELTRWMSCDV
                     EY"
     gene            complement(396..866)
                     /locus_tag="QF359_13410"
     CDS             complement(396..866)
                     /locus_tag="QF359_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0262 family protein"
                     /protein_id="HJO87952.1"
                     /translation="MDERRRIVNVSLDEGTVGRRSPEIEHDRAVAIFDLLEENYFSPS
                     NGELGPFSLYLSLAENRLQVYVRDEADLEIFNFNLPLSSFRSVIKDYFLICESYYDAI
                     KAASPSKIEAIDMARRGLHNEGSKILKDRLHEHVEVDFDTARQLFTLICVLHIR"
     gene            complement(872..>1758)
                     /gene="hisD"
                     /locus_tag="QF359_13415"
     CDS             complement(872..>1758)
                     /gene="hisD"
                     /locus_tag="QF359_13415"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014744520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HJO87953.1"
                     /translation="NAIPAKVAGVKRLVMVVPTPEGEINPLVLAAANIADVDEIYRIG
                     GAQAVAALAFGTKSINPVDKIVGPGNAYVATAKRQVFGVVGIDMIAGPSEILVVADGQ
                     NDSRWIAADLLSQAEHDTSAQAILITDDEDFAEAVVQAVDIYLQKLARNEIARQSWQD
                     FGAVITVENLNDAVPLIDVIAPEHLELAIAAPEEMADNISNAGAIFLGRHTPEALGDY
                     IGGPNHVLPTGRSARFSSGLGVLDFMKRTTLLGVTEHSIQAIGPAAVTLAEAEGLEAH
                     ALSIAIRLADSDNETDGG"
BASE COUNT          474 a          487 c          399 g          398 t
ORIGIN      
        1 gatcgcgaat ttgccggtat ccgtccagcc gggaatcccg gcgtccccga ataacatcag
       61 gatcatgggt tggctaatat tcaacatcac aagacatcca acgcgtcaat tcgaccgcgg
      121 catgctgggc tttcggcgat aagaagacaa tgagatcaaa tgacgtatca tcaagtgtag
      181 acaaggtttt cgacgcgtga ttcgaaagat caatatcgat ttccgccata acttcaatca
      241 tgaaaccatc tggctcaccg gccctaacac cggctgaatc aacataaata cgatcaccgt
      301 ggagactttt taaaatacct tctgccatcg ctgaacgcac cgaattcata gtacaggcga
      361 aaaggacggt agcaggaagg tcgctcatcg attactcacc ggatatgcaa cacacagatg
      421 agagtgaaaa gttgccgtgc ggtatcaaaa tccacttcga catgttcatg caggcggtct
      481 tttagaattt tagaaccttc attgtggaga ccgcgccgcg ccatatcgat agcctcaatc
      541 ttggatgggc tcgccgcctt gatagcatcg taatagcttt cgcaaatcag gaagtaatct
      601 ttgatgacgg accgaaaact tgacagcggt aaattaaaat tgaaaatttc caagtcagct
      661 tcatcgcgaa cataaacctg caggcgattt tccgccaaac tcaaatacaa agaaaacgga
      721 ccaagctcac cattggatgg cgaaaaataa ttttcttcca gcaaatcaaa tatcgctacg
      781 gcccggtcgt gttcgatctc cgggctacgg cggccaacag ttccttcatc cagcgatacg
      841 ttaacgatac ggcggcgttc atccatgtca cttacccgcc atccgtttcg ttatcggaat
      901 ccgccagccg gatcgcgata gataacgcat gcgcctccag accttcggct tcagctaagg
      961 ttaccgccgc cggaccaatc gcctggattg agtgttcggt tacacctaaa agtgtcgtgc
     1021 gcttcataaa atccaaaacg ccgagaccgg aggaaaaacg cgccgagcgg ccggtcggta
     1081 acacatgatt cggcccccca atataatcac caagcgcttc cggcgtgtga cggccgagga
     1141 aaatcgcccc ggcattagag atattatcag ccatttcctc cggcgctgcg atggcgagct
     1201 ccagatgctc cggcgcaatg acatctatca acggcacagc atcgttcaag ttttcaacag
     1261 ttatgaccgc accaaaatcc tgccagctct gtctagcaat ctcgttccgc gccagttttt
     1321 gtaaatatat atcgactgcc tgaaccaccg cttcggcaaa atcttcatca tcggtaatga
     1381 gaatagcttg cgcggaagta tcgtgttcag cttgcgacaa tagatcggcg gcgatccatc
     1441 tagaatcatt ttgaccgtcg gcaacaacca atatctctga tggcccggcg atcatatcga
     1501 tgccaaccac gccaaacact tggcgcttag cggtggcgac ataggcattg cccgggccaa
     1561 caattttatc gactggatta atgcttttag tgccaaaagc cagcgcggcg acagcctgag
     1621 cgccgccaat acggtaaatc tcatcaacat cagcgatgtt cgctgctgcc agaaccaacg
     1681 gattgatctc tccctctggt gtcggcacca ccatcaccag tcttttaacc ccggcgactt
     1741 tggccggaat ggcattca
//
LOCUS       DASCNL010001030         5144 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002118735, whole genome shotgun sequence.
ACCESSION   DASCNL010001030 DASCNL010000000
VERSION     DASCNL010001030.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 5144)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5144)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5144
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002118735"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="QF359_13420"
     CDS             <1..281
                     /locus_tag="QF359_13420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87954.1"
                     /translation="SRNDLSMRENEADAECPKFRLTTNYSRKIGILDFGSLGCEVAKR
                     APLCAIDNVVLSPHLSRNTEESWQNRNQLAHQILLAFLNNKTSINQVC"
     gene            487..1794
                     /locus_tag="QF359_13425"
     CDS             487..1794
                     /locus_tag="QF359_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJO87955.1"
                     /translation="MSASFAIVGSGPSGMYAADALLKNFPDCQIDVFDKLPMPFGLIR
                     YGVAPDHFKTKNTARQFSRTLDLDQVRYLGNVEIGRDLSVDELKDNYDAVLYATGMYN
                     DRLLGIPGEGLPGVYGACAFVGWYNAHPDYRDIDPMLDGGNVAVIGIGNVALDVCRVL
                     VKTRAEMQDTDIAAHALEAIEKMPIEEVHMFGRRGPVEAGFTPKELGEIFDLERCAVI
                     VNPDQIPGEVTGDFEGREKGVKEKNLATLRELAAQDKPEKPVRLQFQFYASPVEILGS
                     GRVEGIRLERTEVIDGKAVATGKTFDVPCCSVITAIGYYADPPEGLPLRGATIENVYG
                     RVRDNIYVVGWAKRGSTGTIPTNGPDSRSVVELLIEDISAGAIELGKPGGTAINTLLS
                     SRNIRVVSREDVNTIRAAEVANAVDGHPWEKFTRIDDMLAVLD"
     gene            1804..2133
                     /locus_tag="QF359_13430"
     CDS             1804..2133
                     /locus_tag="QF359_13430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87956.1"
                     /translation="MLEWYVLAVIGFALSFDQHRTVLTAGVPYPSFGLTPVLFDAAAW
                     VGGIATLAMLIAGFFLGAWWWPFLAMVVGTGTNYCGRIVMPMEYRLAVSIASTLMGLG
                     ATIVFFR"
     gene            complement(2140..3015)
                     /locus_tag="QF359_13435"
     CDS             complement(2140..3015)
                     /locus_tag="QF359_13435"
                     /inference="COORDINATES: protein motif:HMM:NF018076.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HJO87957.1"
                     /translation="MVTTDTLYRVAIVVLREFSDAFTEALEPHVSSVAWSAREENAEA
                     ELLGFADEPPDKKAIRLAIKLTAEALEIAVPDIEIAQIPMRNWVLDNIKQFPPISTER
                     FFVHSAEYEEAVPNGQIGLRIPAGTAFGSGDHGSTKGCLLALDKMDHWRVRCALDMGC
                     GSGILAIAIAKRWHIPVVASDIDPIATAVTQENAEINGVARFVRSICASCYDHPVVQA
                     GRYDLIVSNILARPLCIMAKNLGRHLVPGGWAVLSGLLQGDANRIISAHHQQGLRLHS
                     RVELGEWVTIVMRQK"
     gene            complement(3015..>5144)
                     /locus_tag="QF359_13440"
     CDS             complement(3015..>5144)
                     /locus_tag="QF359_13440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HJO87958.1"
                     /translation="TRVLTTRLAHILVHGKARPWEIVAVTFTNKAAREMQNRVAMITG
                     RPVESWWLGTFHALGARILRRHAELVGLKSNFTILDADDQVRLLKQLMESHQIDDKKW
                     PARVLMGVIQCWKDRGLTSDKVSKDESSEFAEGILVDLYREYQERLKALNAADFGDLL
                     LLCLTLFTENADILHEYQMKFRYLLVDEYQDTNVAQYLWLRLLAQEHRNICCVGDDDQ
                     SIYSWRGAEVGNILKFEKDFPGAEVIRLEQNYRSTPHILAAASGLIAHNEGRLGKKLW
                     TGVDAGDPVKVRAVWDGEEEARMIGDEIEARQSKRQSLEEIAILVRAGFQMREFEERM
                     ITLGVPYRVIGGPRFYERQETRDAIAYLRVVNSADDDLAFERIINVPKRGLGQATVQA
                     VHQLARARGMPMYEAARLIVETDEIKPKARTSLKNLIQDFERWRANLVSLSHRELAAI
                     ILDESGYTEMWQRDKSPEAPGRLENLKELVAGLEDFENMQGFLEHVSLVMENEENKTE
                     DKVSLMTLHAAKGLEFDTIFLPGWEEGLFPHQRSLDEEGLKGLEEERRLAYVGITRAK
                     KEALIFHAANRRIYNQWQNSLPSRFVDELPTDNIEQMAEQGLYGGIGAQAGLRSSGSG
                     LRETANSFSVEAPKKRGHASDGTVIEGEAWLVPSGSNNGIFDIGARVFHQKFGYGKVL
                     SADGNKLEVEFEKAGTKKVIDSFVDPA"
BASE COUNT         1242 a         1348 c         1258 g         1296 t
ORIGIN      
        1 attctcgcaa tgacctgtca atgcgggaaa acgaagccga tgcggaatgc ccaaaatttc
       61 gtttaacaac aaattacagc cggaaaatag gtattcttga ttttggttca ctcggttgtg
      121 aggtcgcgaa acgcgcgcca ctttgtgcca tagataacgt agttttatcg ccacatctat
      181 cccgtaacac ggaggaatcg tggcaaaatc gtaatcaact cgcccaccag attttactgg
      241 cttttctcaa caataaaaca tcgatcaacc aagtctgctg aacctttata atcacaataa
      301 ccggcgcttg acctaactga ggttttgtca catcttccct cacaccaaaa ggaaatcgtt
      361 ctaaaattac taggtatacc aataagttca gcgcgcattt agagaactta aaatttggct
      421 gaacttagtt ttcgccagat tatttggtcg aaaagtgcaa ctaagattat agggaaaaat
      481 taaataatga gtgcgtcatt tgccattgtc ggttccggac cctctggaat gtacgccgcc
      541 gatgctttgt taaaaaactt tccagattgc caaatcgatg tattcgataa attaccaatg
      601 ccgtttggtc taatccgcta tggcgtggca ccggatcatt tcaaaaccaa gaatacagcc
      661 cggcaatttt cccgcacgct cgacctcgat caagtacgct atttaggcaa tgtcgaaatt
      721 ggccgtgatc tttcggtcga cgaactcaaa gacaattatg acgccgtcct gtatgccacc
      781 gggatgtata acgatcgtct gttggggatt cctggcgagg gcttacccgg tgtatatggg
      841 gcttgcgcct ttgtcggttg gtacaatgct cacccggatt accgcgatat tgatccaatg
      901 ctggatggcg gcaatgttgc ggttatcggt atcggcaatg tcgcccttga tgtctgtcgg
      961 gtattggtaa agactcgcgc cgaaatgcag gacaccgaca ttgctgccca tgcacttgaa
     1021 gcgattgaaa aaatgccgat tgaagaagtt catatgttcg gccggcgggg tccggttgaa
     1081 gccgggttta cgccaaaaga gctaggcgag atatttgacc tggagcgctg tgccgtaata
     1141 gttaatccag atcaaatccc aggtgaagtg actggtgatt ttgaaggtcg cgagaaaggt
     1201 gttaaagaaa aaaatctcgc tacgctgcgt gaattagcgg ctcaggacaa acccgaaaag
     1261 ccggtcaggt tacaatttca gttttatgct tcgccggttg agattctcgg ttctggtagg
     1321 gttgaaggca ttcgcctgga acgcaccgaa gttattgacg gtaaagcagt agctacgggc
     1381 aaaacttttg atgtgccgtg ctgttctgtc attacggcga ttggttatta tgcagatccg
     1441 ccagagggct tgccgcttag aggggcgacc attgaaaatg tttatggccg ggtgcgcgat
     1501 aatatttacg tagtcggttg ggccaagcgc ggctcgaccg gtaccatccc caccaacggt
     1561 ccggattcgc gcagtgtcgt tgaactgcta atcgaagata ttagtgctgg tgccattgag
     1621 cttggcaagc cgggtggcac cgccattaat actttgctat cttcaaggaa tatccgagta
     1681 gtatcgcggg aagatgtcaa taccattagg gccgccgaag tggccaacgc tgtcgacggt
     1741 catccgtggg aaaaatttac tcgcattgat gacatgctgg ccgtactcga ctaatctgaa
     1801 tcaatgcttg aatggtatgt ccttgcggtg attggcttcg cactcagttt tgatcagcac
     1861 cggactgttc taacagcagg tgttccctac ccgagttttg gcctgacgcc ggtcctgttt
     1921 gatgcggcgg cctgggttgg cggcatagcg acactggcga tgttgattgc aggatttttc
     1981 ttgggcgctt ggtggtggcc ttttctcgcc atggtagttg gtaccggcac gaactattgc
     2041 ggccgcatcg ttatgccaat ggaataccgc ttggcagtat cgattgccag tacactcatg
     2101 gggctcggtg ccaccatcgt ctttttcaga tagctataat tatttttggc gcatcacgat
     2161 tgttacccac tcgccaagct cgacgcggct gtgaagccgt aaaccttgct gatgatgcgc
     2221 ggaaataatg cgattggcat caccctgcaa aagacctgac aataccgccc aacctcctgg
     2281 aactaaatga cggcccagat ttttcgccat gatgcaaagt gggcgagcca aaatattgct
     2341 gacaatgaga tcatatctgc cggcttgcac caccggatga tcgtagcagc tggcacagat
     2401 actgcggaca aatcgcgcta ccccattgat ttcggcattt tcctgtgtca ctgcggtggc
     2461 gattggatca atgtcagagg cgacgaccgg tatgtgccag cgcttggcga tggcgattgc
     2521 caaaataccg gaaccacacc ccatatcaag cgcgcagcgt actcgccaat gatccatctt
     2581 atccaaagcc agtaaacagc ctttggttga accgtgatca ccggagccaa acgccgtccc
     2641 cgccggtatt ctgaggccta tttggccatt tggcacagct tcctcatatt cggcgctgtg
     2701 gacaaaaaag cgctcggttg aaatcggcgg aaattgctta atattatcaa gcacccaatt
     2761 gcgcataggg atttgcgcga tctctatatc cggcaccgct atttccagtg cctcggcagt
     2821 gagcttgatt gccagccgga ttgctttttt gtcgggtggc tcatcggcaa agccaagcag
     2881 ctcagcttct gcattctctt cccgtgccga ccaggcaacc gatgagacgt gcggctctaa
     2941 tgcttcggta aaagcatcac taaattcccg caataccaca atggcaaccc gataaagggt
     3001 gtcagtggtg accattaggc cggatcaaca aagctatcga tgactttttt ggtaccggct
     3061 ttctcgaact cgacttccag cttgttgcca tcagcagaca acactttgcc gtagccgaat
     3121 ttttggtgaa atacccgcgc accaatatca aaaataccat tgtttgagcc ggacggcact
     3181 agccaggcct cgccttcaat caccgtacca tcgctggcat ggccgcgctt tttaggagct
     3241 tcaacggaaa acgaattagc tgtctcacgt aaaccggaac cacttgagcg caaaccagct
     3301 tgcgcaccga tcccgccata gagaccctgc tccgccattt gctcaatatt gtccgttggc
     3361 agttcgtcaa caaaacggct cggcagagaa ttttgccact gattgtagat gcggcgattg
     3421 gcggcatgga atatcaatgc ttctttcttt gcccttgtga tgccgacata agccaagcgg
     3481 cgttcctctt cgagcccctt caagccttct tcatcgaggc tgcgttgatg cggaaacaag
     3541 ccttcctccc aacccggcag aaaaatcgta tcaaactcca atcctttggc ggcatgcagc
     3601 gtcatcaggc taaccttgtc ttcggttttg ttttcctcat tttccatcac cagactgaca
     3661 tgctcgagaa agccttgcat attttcaaaa tcctcgagac cggcgacgag ctctttcaag
     3721 ttttccaacc gccccggcgc ttcgggggat ttatcgcgct gccacatttc ggtatagccg
     3781 gattcgtcca aaataatcgc tgccagttcc cgatgcgaca gcgagactaa attagcacgc
     3841 cagcgttcaa aatcttggat caaattcttc aatgacgtcc gtgcctttgg tttaatctca
     3901 tcggtctcaa cgattaatcg tgccgcctca tacattggca tgccccgggc ccgcgctagt
     3961 tgatgaaccg cctgcacggt cgcctgacca agaccgcgtt tcggcacatt gataatgcgt
     4021 tcaaaggcga gatcatcatc ggcgctatta acgacgcgaa gataagcaat agcgtcccgg
     4081 gtttcctggc gctcataaaa gcgcggcccg ccgatgaccc gatagggcac accgagggta
     4141 atcatacgct cctcaaattc ccgcatttga aagccggccc tcactagtat cgcaatttcc
     4201 tcgaggcttt gacgtttgct ttggcgggcc tctatttcat cgccaatcat gcgggcttct
     4261 tcttcgccgt cccaaaccgc gcgcacttta accggatcac cggcatccac accggtccag
     4321 agctttttac ccagccgtcc ctcattgtga gcaatcaggc cggaggcggc ggccaggata
     4381 tgcggcgtcg agcggtaatt ttgctcaaga cgaatcacct cggcacccgg gaaatctttt
     4441 tcaaacttga ggatgttgcc gacctcagca ccccgccagg aatagatcga ctgatcatcg
     4501 tcaccaacac agcagatatt tctatgttcc tgggcgagca gacgcagcca gagatactgg
     4561 gcgacattgg tatcttgata ttcatcgacc aggagatagc ggaacttcat ttgatattcg
     4621 tggaggatat cggcattttc ggtaaataat gtcagacata acaataaaag gtcaccaaaa
     4681 tcagccgcgt tcaatgcttt gagccgctct tgatactctc ggtagagatc aaccaaaatg
     4741 ccttcagcga attctgaact ttcatcctta gagactttat ccgatgtcag gccacgatcc
     4801 ttccagcact ggatcacccc catcaaaacg cgcgccggcc attttttatc gtcgatctga
     4861 tggctttcca tcaattgctt aagcaggcgc acctgatcat cggcatcgag aatggtgaaa
     4921 ttacttttga gtccaacaag ttcggcatga cggcggagga tacgggcacc taaggcatgg
     4981 aacgtgccga gccaccagct ttcaaccggc cggcccgtaa tcatcgcgac ccggttttgc
     5041 atttcccgcg ctgctttatt ggtgaaggtg acggcgacaa tttcccatgg ccgagcttta
     5101 ccatgaacca atatatgcgc gagcctggtt gttaacacgc gggt
//
LOCUS       DASCNL010001031         2106 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002118894, whole genome shotgun sequence.
ACCESSION   DASCNL010001031 DASCNL010000000
VERSION     DASCNL010001031.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002118894"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            193..1791
                     /gene="ggt"
                     /locus_tag="QF359_13445"
     CDS             193..1791
                     /gene="ggt"
                     /locus_tag="QF359_13445"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HJO87959.1"
                     /translation="MRLLDQPGRSTVHSMDGMAATSHPLSTITAIQTLMSGGNAMDAA
                     IAAVATQCVVEPQSTGIGGDMFCLYKPHDGDIVGFNGSGRAPAAATADWFAEQGITEI
                     GHDSPHSVTIPGSIDGWSKLIKAHGTKSLGDMLQPAIRFAHNGFPMHHRSHLDWSLME
                     EILCKDPTGASQYFPQGKVPDIGSVVTLPLLAKTLEHIADKGRSGFYEGWVAEDIVSF
                     LQGMGGLQTMEDFANFEGTFVTPIKTNYKGYEVWECPPNGQGIVALEMLNILGGMGLD
                     QLDPLSTERLHIEIEAARLAYRDRDAVLADPDNTDIPVERWLSEEHATSQRELIDRNK
                     RMEPLSASELPNHRDTVYITIVDKNRNAVSIINTNFYLFGSARVAPKSGIVLHNRGKS
                     FSLNPNHPNCIAPNKRPLHTIIPGMLMKDGKAQMPFGVMGGQYQACGHVHLLSNLLEW
                     DMDLQEAIDFTRVFPDTDDPDDRVQVESALPESVRNELEALGHQTYIPVRPVGGAQAI
                     WIDWENGVLRGASDPRKDGSAIGY"
     gene            complement(1852..>2106)
                     /locus_tag="QF359_13450"
     CDS             complement(1852..>2106)
                     /locus_tag="QF359_13450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87960.1"
                     /translation="RLHRQKEIACNVDQAFTGTQEVTSNIVGVSGEVLSTGETAERVQ
                     TSVHQLSEMSDELADAVQQFLANIRSGGVTNEDKSVAVAE"
BASE COUNT          554 a          532 c          494 g          526 t
ORIGIN      
        1 caatttaagc attttgctct tatcatagct ggtgaaacac caagatcttg ttcaccttgt
       61 tctcagatcc atcgaatttt ccttttctgg ttttcaactc tcaagcttgt tccttatgat
      121 gtctctgtat aaaatcgccg gcaataattt ccaaaatcaa aatcattacc catcgcttag
      181 ggaagaaact tcatgcgctt actcgaccaa cccggtcgtt caacagttca ctcaatggat
      241 ggcatggcgg ctacatcaca cccgctctca acaataacgg ccatccaaac gctaatgtca
      301 ggcggtaatg cgatggacgc tgcaattgcc gcagtggcaa cacaatgcgt ggtcgaaccg
      361 cagtctactg gtattggcgg tgatatgttc tgcctctaca aaccgcatga tggggatatc
      421 gttggcttta acggatcagg tagagcgccc gccgctgcaa cggcagattg gtttgctgaa
      481 caaggtatta cggaaatcgg acatgatagt cctcattctg ttacgattcc aggttctatc
      541 gacggatggt ctaaattgat caaagcgcat ggtacaaaat ctttgggcga tatgcttcaa
      601 ccagctattc gtttcgccca taacggcttt ccgatgcatc accgcagtca cttggactgg
      661 tcactgatgg aggaaatttt atgtaaagat ccaactggcg catcacagta tttcccccaa
      721 ggaaaagtgc ctgacatagg ctctgtcgtt acgcttccac tgctggcgaa aaccctcgaa
      781 catatcgccg acaaagggag aagtggattt tatgagggct gggtcgccga agatattgtt
      841 tcttttttac aaggaatggg cggactgcaa acgatggaag attttgccaa tttcgaaggc
      901 accttcgtaa cgccgatcaa aactaattac aaaggctatg aggtctggga atgtccaccg
      961 aacggccaag gcatcgttgc ccttgagatg ctcaacatat tgggtggaat gggattggac
     1021 cagcttgatc cgctttcaac cgagcgcctg catatcgaga tcgaagccgc ccgtctcgct
     1081 taccgggatc gcgatgcggt attggctgac ccagacaaca cagatattcc cgtcgaacgc
     1141 tggttgtcag aagaacatgc caccagccag cgcgaactta ttgaccgaaa caaacgaatg
     1201 gaaccgttat ccgcttcaga actgcccaat cacagagata cggtatatat aacgatcgtt
     1261 gataaaaacc gaaatgcagt aagtattatc aatacgaact tttatctttt cggcagcgcg
     1321 cgcgtggccc ctaaaagtgg tatcgtcctt cataaccgcg gcaagagctt ttcactcaat
     1381 ccaaaccatc cgaactgcat agcgcccaac aaacgcccgc tccacaccat cattcccggt
     1441 atgttgatga aagacggcaa agcacaaatg ccgttcggcg ttatgggtgg gcaatatcaa
     1501 gcctgtggcc atgtccattt actgagcaat ttgcttgaat gggatatgga cttgcaggaa
     1561 gctatcgact tcacccgtgt tttccccgat accgatgacc ccgatgaccg ggttcaggtt
     1621 gaaagtgcct tgccggaaag cgtgcgtaac gaactggagg cactcggcca tcaaacctat
     1681 atccccgtgc gcccggttgg cggcgctcag gcaatttgga tcgattggga gaacggcgtg
     1741 ttacgcggcg catcagaccc gcgcaaagac ggcagtgcga tagggtatta ataggcggct
     1801 gttagtgaac aaaaaaaacc agcaaaaata acgccggccc atttcttttt gttattccgc
     1861 aactgctaca gatttgtctt cattggtgac accgccggaa cgaatattag cgaggaactg
     1921 ctgcaccgca tccgccaatt catctgacat ttcacttaat tggtgaactg aagtctggac
     1981 acgttccgct gtttcaccgg tacttaaaac ctctcctgaa acgccgacaa tattagatgt
     2041 cacttcttga gttccagtaa aagcttggtc gacattgcag gcaatttctt tttgccggtg
     2101 taagcg
//
LOCUS       DASCNL010001032         2473 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002123374, whole genome shotgun sequence.
ACCESSION   DASCNL010001032 DASCNL010000000
VERSION     DASCNL010001032.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002123374"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="QF359_13455"
     CDS             complement(<1..280)
                     /locus_tag="QF359_13455"
                     /inference="COORDINATES: protein motif:HMM:NF015735.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HJO87961.1"
                     /translation="MLYIIYQEDVENSGPLRERHKLAHFRYLEDHDDKLVLGGALLAD
                     DGVARVGSVLIINVANREEAEEFSAYEPLRKGGVFKSVKITHMRRGQWN"
     gene            complement(286..756)
                     /locus_tag="QF359_13460"
     CDS             complement(286..756)
                     /locus_tag="QF359_13460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HJO87962.1"
                     /translation="MGKIDERLKELGIEIPAAAIPKAAKIETYQIYNNTLRVSGQLPA
                     IDGDIKYFGHVGREQSLEDGQAAARLSVLNVLAQAKHALGGDLDRIERVLNLRGFVAT
                     VEGFDQVAQVVNGASELMHDIFGEQGKHTRTAAGVAAMPYNVTVEIEGLFALKE"
     gene            911..1900
                     /locus_tag="QF359_13465"
     CDS             911..1900
                     /locus_tag="QF359_13465"
                     /inference="COORDINATES: protein motif:HMM:NF024989.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HJO87963.1"
                     /translation="MKAIRVTEKSASSDDLKFELADIKIPKIKDGECLVKIHASGINP
                     SDVKALLGRMPNLVWPRTPGRDYAGVVVEGPSELVGKEVWGTGGDLGMGRDGAHAEFN
                     VVDVAGIREKPANLSMAEAGSVGVSWTCAWLGMVPGAHVAGGETVTVLGANGKVGEAA
                     IQIATAAGARVIAVERTRDDYFGHATGPVDVVNLEKEPDVQKAIMDRTDGKGTDIIMN
                     TVGSPYFEAACNSLAKQGRQIICTTIEEDNNINLRTFYRGNYHMIGVSNMDHNNILSG
                     ELLEDTKSGFESGAYKPYPIKDENVYSLEDAGEAYKIVLKGASRDRIVIDPKA"
     gene            complement(2143..>2473)
                     /locus_tag="QF359_13470"
     CDS             complement(2143..>2473)
                     /locus_tag="QF359_13470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HJO87964.1"
                     /translation="APGKTYELGGPSVYSSVDIMRMLTKIIGRKRLLVPIPFWYLAIW
                     GWLLQKIPAPLLTYDQVKQLEVDNVVSEGAKTLADLGVMATPAEAILPGYLSRFKKVG
                     HEAASST"
BASE COUNT          660 a          619 c          576 g          618 t
ORIGIN      
        1 ggttccattg accgcgccgc atatgagtta ttttaaccga cttaaaaacg ccgcctttcc
       61 gcagcggctc ataggctgaa aactcttcag cctcctcccg gttcgcaacg tttataatca
      121 ggacagagcc cactcgcgcc accccatcat cggcaagcag cgcaccaccc aacactaatt
      181 tatcatcatg gtcttcaaga tatctaaaat gggccagttt atgccgttca cgcaatgggc
      241 ccgagttttc aacatcttcc tgataaataa tatagagcat ggctgctatt cctttagagc
      301 aaacaggcct tcaatctcga ccgtgacatt gtagggcatc gccgcgaccc ccgccgctgt
      361 cctggtatgc ttaccctgtt caccaaaaat atcatgcatc aactcggaag ccccgttgac
      421 cacttgggct acttgatcaa agccctcaac tgtcgcgaca aacccacgca aatttaacac
      481 ccgttcaatc cggtcgagat ctccacccag cgcatgttta gcctgggcca gtacgttgag
      541 caccgagagc cgagcggccg cctgaccatc ctccaggctc tgttcacgcc cgacatgacc
      601 gaaatatttg atatcaccgt caatcgctgg cagctgacca gagactctca gcgtattatt
      661 ataaatctga taagtttcaa tctttgccgc ttttggtatc gccgcagcag ggatttcgat
      721 acccagttcc tttagtcgtt cgtcaatctt tcccatgaaa taatattcct ttggttatat
      781 ttttcagttt aaatttcctg atcaacttgt ctagaaatca ataggctggt tgggtaaatc
      841 cttccaaatg cccaggtaaa ctgctagaga aatgacataa taaaatattt tggggatgga
      901 agaaaatcac atgaaagcaa ttcgtgtcac cgaaaaatca gcaagttcag atgatctcaa
      961 gttcgagctt gctgatataa aaataccaaa aattaaagac ggtgaatgtc tggttaaaat
     1021 tcatgccagc ggtattaatc caagcgatgt taaagcactg ttaggtagaa tgccgaactt
     1081 ggtttggccg cgcacaccgg gccgtgatta tgccggtgtt gttgttgaag gcccaagcga
     1141 gttggtcggc aaagaagtat ggggtaccgg cggtgatctc ggtatgggac gagacggggc
     1201 ccatgctgaa tttaacgttg ttgatgttgc cggcattcgt gaaaaaccag ccaatctttc
     1261 catggctgaa gcgggttctg ttggcgtttc ctggacctgt gcctggcttg gcatggtgcc
     1321 gggcgcccat gtcgcaggtg gtgaaactgt cactgttctg ggcgccaatg gcaaagttgg
     1381 cgaagcagcc atccaaatcg ccaccgctgc cggggccagg gtgatcgctg ttgaacgcac
     1441 gcgggatgac tattttggtc acgccaccgg tccggttgat gtggttaatc ttgaaaaaga
     1501 accagatgtg caaaaagcca tcatggatag aactgatggc aaaggcacgg acattataat
     1561 gaacactgtc ggcagccctt attttgaggc ggcgtgtaat tcgctcgcca agcaaggccg
     1621 ccaaatcatt tgtacgacca ttgaagaaga caacaatatt aatctccgga cgttttatcg
     1681 cggtaattat catatgatcg gtgtcagcaa tatggatcac aataatattc tctcgggcga
     1741 attactggaa gatacgaaat ccggtttcga aagcggagct tataagccgt atccgatcaa
     1801 agatgaaaat gtctatagtc tagaggatgc cggtgaggct tataaaattg tccttaaagg
     1861 cgcatctcgc gaccgtatcg ttattgatcc gaaagcgtaa atctcgagat gtcccctctc
     1921 gacaaatctg ctaaaaaacc cacccaatta tccctttaac taaggatcaa ctgggcaaat
     1981 ggtagaaaaa agaagccaac ttaaaatgat actccgcaaa tccgatgaaa ctgaccgccg
     2041 cagtgtgctt gtgcaacgca cggttagagg ctcaatattc tcgcgtgaat acagtgaaat
     2101 tgtggcatca gtcacagtgg cctcgaccgc ttaaaaaaat gctcatgttg aagacgctgc
     2161 ttcgtgcccg actttcttaa accttgataa atagcccggc aatattgctt cggccggggt
     2221 tgccatcacg ccaagatcgg ccaaggtttt agcgccttct gaaaccacgt tatcgacttc
     2281 caattgcttg acctgatcat aggttaacag cggcgctggg atcttttgca gcagccagcc
     2341 ccaaatcgct aaataccaaa acgggatcgg caccaacagg cgcttacggc caattatttt
     2401 cgtcagcatt ctcataatat cgacgctgct atagacgctg ggtccgccga gctcgtaggt
     2461 tttgccgggg gca
//
LOCUS       DASCNL010001033         2152 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002124293, whole genome shotgun sequence.
ACCESSION   DASCNL010001033 DASCNL010000000
VERSION     DASCNL010001033.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002124293"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1137)
                     /gene="fabF"
                     /locus_tag="QF359_13475"
     CDS             complement(<1..1137)
                     /gene="fabF"
                     /locus_tag="QF359_13475"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HJO87965.1"
                     /translation="MRRVVVTGIGLISPLACGVDLTWRKLIEGKSGIGPIKSFDPSRL
                     SSRIAGEVPREADVEGSFIVDDYISTKEQRRMDTFIQFGLVAADFAIADSGWSPTDDE
                     SLERTGVLIGAGIGGLPEIEKSASTVHDGNIRRLSPFFIPASLINLASGQVAIKHGFK
                     GPNHAVVTACSSGAHAIGDAARIIMWEDADVMIAGGAEAAICELGVAGFAQARALSIG
                     FNETPEKASRPWDVDRDGFVIGEGAGIVVLEELEHAKKRGVQIYAEIVGYGMSGDAHH
                     ITAPAGDGNGGYRAMQAALKRAGLNAEDIDYINAHGTSTPLGDEIELSAVKRLFGDAA
                     YDIAMSSTKSAIGHLLGAAGAVEAIFSILAIKHDVVPPTLNLDNP"
     gene            complement(1212..1445)
                     /locus_tag="QF359_13480"
     CDS             complement(1212..1445)
                     /locus_tag="QF359_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HJO87966.1"
                     /translation="MSDVVDRVKGIIVEHLGVNADKVTDTASFIDDLGADSLDTVELV
                     MAFEEEFGCEIPDDAAEKIMTVKDAVDFLSSAA"
     gene            complement(1605..>2152)
                     /gene="fabG"
                     /locus_tag="QF359_13485"
     CDS             complement(1605..>2152)
                     /gene="fabG"
                     /locus_tag="QF359_13485"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HJO87967.1"
                     /translation="GGAQQLIKDADEAMGSIDILVNNAGLTRDNLAMRMKDEEWQAVL
                     DVNLTASFQLSQACLRGMMRQRFGRIIGITSVVGVTGNAGQANYAASKAGMIGMSKSL
                     SAEVASRGITVNCVAPGFIVTPMTDALSDEQKEALLGVIPTGRLGEVEDIASSVVFLA
                     SDEASYMTGQTLHVNGGMAMI"
BASE COUNT          570 a          594 c          454 g          534 t
ORIGIN      
        1 tggattatcg aggtttagcg tcggcggcac cacgtcgtgt ttgatcgcca ggatggagaa
       61 aatggcttca accgcaccag ccgcaccgag cagatgacca attgccgatt tagtggagga
      121 cattgcaatg tcgtaagccg catctccgaa taaacgtttc accgcgctca actcaatctc
      181 atcgccgagc ggtgtcgacg tgccatgggc gttgatgtaa tcgatatctt cagcattgag
      241 gccagcgcgt tttaacgctg cctgcattgc ccggtacccg ccattaccat ctccagccgg
      301 tgccgtaata tggtgagcat cacccgacat accatagccg acaatttcgg cgtaaatctg
      361 gacaccacgt tttttggcgt gttcgagttc ttccagcaca acaataccgg caccctcacc
      421 gataacaaag ccatcgcgat caacatccca cggccgcgag gctttttccg gtgtttcatt
      481 aaagcctata gataatgccc tggcttgcgc aaaaccggca acgccgagct cacagattgc
      541 cgcttcagca ccaccagcga tcatcacatc ggcgtcttcc cacatgatta tgcgcgccgc
      601 atcacctatc gcatgagcgc ctgatgagca ggctgttacc accgcatggt tgggtccttt
      661 aaatccatgt ttaatagcaa cttgtccaga tgccaaatta atcaaactcg cgggaataaa
      721 aaagggacta agacggcgga tattaccgtc atgaacggta ctagcgctct tttcgatttc
      781 cggtaatccg ccaataccgg caccgataag aacacccgtt cgttctagac tttcatcatc
      841 tgtcgggctc cagccagaat ctgcgatggc aaaatcggca gcaaccaagc caaattggat
      901 aaacgtatcc atccggcgtt gttcttttgt agagatataa tcatcgacga taaagctgcc
      961 ttcaacgtct gcttctcgag ggacttcgcc agcaatgcga gacgataacc gggaaggatc
     1021 gaaggatttt attggaccaa tgccggactt tccttcaatc agtttgcgcc acgtcaggtc
     1081 gaccccgcag gcaagcggtg aaatcagacc aatacctgta acaaccacac gtctcatttc
     1141 gatcgcgcta cttcgctaaa ttgtaccgaa gatatagtcc ggcagaaact gggcttttta
     1201 tagtttgacg tctaagcagc cgaagaaaga aaatcaaccg catctttgac agtcataatt
     1261 ttctcagcgg catcatccgg gatttcgcaa ccgaattctt cttcaaaggc catgacaagt
     1321 tcgacggtat cgagactgtc agcaccaaga tcatcaataa aacttgctgt atcggtaacc
     1381 ttatcagcat tgacacccaa gtgctcaaca ataatacctt ttacgcggtc aacaacatcg
     1441 ctcattttgt tctacctcaa tttaattggt ttttaaaagt ttcacggcaa cgaaaactct
     1501 ttacagaaaa tctgaatttc acggtttcgt aacatacttt gttttgcttt accagcatcg
     1561 ggtaaagtct ttttttcaaa cttggaaaac gccaaatttt acagctagat catggccata
     1621 cccccattga catgaagcgt ttgccccgtc atataactgg cttcatcgct ggcaagaaat
     1681 acgacacttg aagcgatatc ttcaacttcc cccaaccggc ctgttggaat cacgccaaga
     1741 agcgcctctt tctgctcatc agataaagca tcggtcatcg gcgtaacaat aaagccggga
     1801 gccacacagt taactgttat tccgcgagac gcgacctcag cggacagaga tttcgacatc
     1861 ccgatcatgc cggctttgga agctgcatag tttgcttgac cggcattacc agtaactcca
     1921 acaaccgaag taatgccaat gatacggccg aaacgctgcc tcatcatgcc acgcaggcat
     1981 gcttgagata gctgaaaact cgcagtcaaa ttgacgtcca gcacagcctg ccattcttcg
     2041 tccttcatcc gcattgccaa attatcccgt gtgagcccag cattatttac cagtatatca
     2101 atgctgccca tcgcttcatc ggcatctttt atcaattgct gtgcgcctcc ag
//
LOCUS       DASCNL010001034         1230 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002124503, whole genome shotgun sequence.
ACCESSION   DASCNL010001034 DASCNL010000000
VERSION     DASCNL010001034.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1230)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1230)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002124503"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="QF359_13490"
     CDS             complement(<1..941)
                     /locus_tag="QF359_13490"
                     /inference="COORDINATES: protein motif:HMM:NF014758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJO87968.1"
                     /translation="MNQLRHVGKSVKRKDGPDKVTGRAVYCQDVRLPGMLTGRILRSP
                     HPHAKIVSIDLSKAKALDGVKGVITIEDSKGIKHGFVETPRYPPDQEVLARDRVVHVG
                     EEIAAVAAIDDITAQAALELIDIEYEILPPVFNPHKAMQEGSPEIHPSHPKVAEKESF
                     SNIGGKTESGWGDVEQGFAEADYVREDRYESHLRTHGYLEPQVTVAHWESDKLNVWTS
                     SMGAFNKRAKLAKVLDLPYSSVRVHKAYVGGAFGGKIDLYSHEFCAARLSMLTGRPVR
                     FVASREEIFSAYRHGQPLEVELKTGVKKDGTLVAQELR"
     gene            complement(955..>1230)
                     /locus_tag="QF359_13495"
     CDS             complement(955..>1230)
                     /locus_tag="QF359_13495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJO87969.1"
                     /translation="GKNIRTVEDLADGENLNYLQEAFLDQGGTQCGFCTPGMLMSATA
                     LLEKNPKPTRDDINKALEGNLCRCTGYNSIVDSILQVSDQGVKPRLL"
BASE COUNT          271 a          344 c          308 g          307 t
ORIGIN      
        1 cgcaattcct gagcgaccag agtgccgtct tttttaacgc cggttttgag ctcgacctcc
       61 aatggctgac cgtgccggta ggccgagaaa atttcttcgc ggctggcgac aaaacggacc
      121 ggacggcccg tcaacatcga tagccgggcg gcgcaaaatt catgcgaata aagatcgatc
      181 ttgccgccaa aagcgccacc gacataggct ttgtgcacgc gtaccgacga ataaggcaaa
      241 tccagtactt tggccagttt ggcgcgctta ttgaacgcac ccatcgacga tgtccagacg
      301 ttaagtttgt cgctttccca atgagctact gtcacttgcg gttccaagta accgtgcgtc
      361 ctgagatggc tttcatagcg gtcttcacgg acataatcag cctccgcaaa accctgctcg
      421 acatcacccc agccggattc ggttttgccg ccaatgttgc taaaagactc tttctcggcg
      481 accttggggt ggctcggatg aatttccggt gagccttcct gcatcgcttt atgcggattg
      541 aataccggtg gcagtatttc gtattcaata tcaatcagtt ccaaggcggc ttgcgcggtt
      601 atgtcgtcga tggcggcaac ggcagcgatc tcctcaccga catgtacaac ccgatcgcgg
      661 gccagtactt cctgatctgg tggatagcgc ggcgtttcga caaaaccgtg cttgatgcct
      721 ttggaatcct ctatcgtgat cacacctttg acaccgtcca aggctttggc cttgctgaga
      781 tcaatgctga cgattttggc gtggggatga ggactccgca atatccggcc cgtcagcatt
      841 cccggcagcc tgacatcctg acagtagacc gcccggccgg tgactttatc cggaccgtcc
      901 ttacgtttga cgcttttgcc gacatgcctc aattggttca tcaaattagt tcctttatag
      961 caggcgcggt ttaacgcctt gatcggacac ctgcaaaatc gaatcgacaa tcgaattgta
     1021 accagtgcag cggcagagat taccctccaa agctttgttg atatcgtcac gcgtcggttt
     1081 tggatttttc tccagcaagg cggttgccga catcaacatg ccaggagtgc aaaatccaca
     1141 ttgggtgccg ccttgatcga gaaaggcctc ctgcaagtaa ttcaaatttt cgccatcggc
     1201 caaatcctcg acggtgcgaa tatttttgcc
//
LOCUS       DASCNL010001035         2409 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002126700, whole genome shotgun sequence.
ACCESSION   DASCNL010001035 DASCNL010000000
VERSION     DASCNL010001035.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002126700"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            319..885
                     /locus_tag="QF359_13500"
     CDS             319..885
                     /locus_tag="QF359_13500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HJO87970.1"
                     /translation="MTNKSPGGSFKEFNLDWSRGVLEVFKRAEIRHAAYVPDAGLEPL
                     IDFCHGDEAIRATMLTSEQEGVGMLAGAWLGGDRGVLLMQSSGVGNCINALSLQASCQ
                     IPLVMLVTMRGEWAEFNPWQVPMGQAAQTCLEAQNVIVYRAEESGEVPDVVQAAIDFA
                     FNSQVAVAVLLSQKMIGRKQWGGVSGDE"
     gene            878..1468
                     /locus_tag="QF359_13505"
     CDS             878..1468
                     /locus_tag="QF359_13505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJO87971.1"
                     /translation="MNSETRKLDRRWVVRTLLSDRRDMLVVTGPGAPAYDTAAHEDHP
                     HNLYLWNALGSSAMVGMGLALAQPSRPVVVITGDGDMLMGMGSLATIAVQKPANLSIA
                     VLDNERYGETGMQESHSAYGVDLAAIAMDCGFPMSDTLTEEAEIFYLAEQLHTMAGPQ
                     FAAIKVKAEDLPRVLPPRDGTFLRCRFRSAILGEDS"
     gene            complement(1616..>2409)
                     /locus_tag="QF359_13510"
     CDS             complement(1616..>2409)
                     /locus_tag="QF359_13510"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HJO87972.1"
                     /translation="KLDTSERRTCKTIGLARSTQRYGAAAKIDDDDLRVAMIRLAKQY
                     GRYGYRKIAQLLRMEGWVVNHKKIERLWREEGLQLPRRHKKQRRLYHKDSSVIRLRPQ
                     YPRHIWSVDFVHDKLSNGRSYKMLTVIDEYTREALYVAAKPRMGHTEVLDALYPLFLK
                     HGKPHYIRSDNGSEFIARDLQAWLKKVGIKPIQIYPGSPWENGYNERFNGTLRREVLN
                     AEWFSTIRQAQVVINTWLKQYNHIRPHQSLNMRPPVPETLLQNGT"
BASE COUNT          571 a          592 c          627 g          619 t
ORIGIN      
        1 gtgttacggt gtcatccact tgaacactgt gatcattttg tgtcattggt cggcatcctc
       61 tttttaagac cggtatgtgc tgcaaattac ctggcagcgg cgtcaatagt tttgaaattt
      121 gtttggatca atattgtaag atccatttgt taattaaaaa atatagccgt aaaaaccata
      181 ttatctgcgg aaaaatttaa aaacaatata tctttatgtt atgaaggcta caataaaaat
      241 gtatggacaa attttacatt caatgccaga gtcagatctt caccgcgatc tgtaaacgct
      301 cctttggaaa gttatttgat gacgaataaa tcacccggcg gcagctttaa agagtttaat
      361 cttgattggt cgcgaggggt ccttgaagtt ttcaagcgcg ctgaaattcg gcatgccgct
      421 tatgtaccgg acgccggcct ggagccgctc atcgattttt gccatggcga tgaggccatt
      481 agggccacta tgttgacgtc cgaacaggaa ggcgtcggca tgctcgccgg agcgtggctg
      541 ggaggagacc gaggtgtcct gctgatgcaa agcagcggcg tcggcaattg catcaatgct
      601 ttatccttgc aggcgagctg ccagataccg ctggtaatgc tggtgacgat gcggggtgaa
      661 tgggctgaat ttaatccctg gcaggtaccc atgggccagg cggcgcaaac ctgtctggag
      721 gcccaaaacg taatcgttta ccgcgccgag gaatccggtg aggtgccgga cgtggtccaa
      781 gcggcgatag acttcgcctt caacagccag gtcgccgttg cggttctcct atcgcagaaa
      841 atgatcggtc ggaaacaatg ggggggcgtc agcggcgatg aatagcgaaa cccggaaact
      901 cgatcggcgt tgggtggtca ggacactgct atccgaccgc cgcgatatgc tggttgtcac
      961 cggtcccggc gcacccgcct atgataccgc cgctcatgag gaccatcccc acaatttata
     1021 tctgtggaac gctttgggta gttcggcgat ggtcgggatg gggttagctc tggcgcaacc
     1081 cagccgtccg gtcgtggtta ttaccggcga tggagatatg ctcatgggta tgggatcgct
     1141 ggcgaccata gctgttcaaa aacccgccaa tctttccatc gccgtactcg acaacgaaag
     1201 atatggcgaa accggcatgc aggagagcca ttcagcttat ggcgtcgatc tggcggcgat
     1261 cgcaatggat tgcggattcc cgatgtcgga cactttgaca gaggaagctg aaatttttta
     1321 cctcgccgag caactacaca ccatggcagg accgcaattc gccgctataa aagtcaaggc
     1381 cgaagacctg ccccgtgtgc tgccgccccg ggacggcact ttcctcagat gccgcttccg
     1441 tagcgcaatt ctgggtgaag acagctgatt atcaaataac cacagcaaat gacgcggggt
     1501 catcaagccc tcaacacgag tccatctgtg cctgaatctc tactctaagg tcgtacatga
     1561 aaggagactt caccgtcgca cttaattttt aaactggaag tgtctagccc cctttttatg
     1621 taccattttg cagtagagtt tctggcaccg gtggtctcat gtttagtgac tgatgaggcc
     1681 ggatgtgatt gtactgtttg agccaggtat tgatgaccac ttgggcctgt ctaattgttg
     1741 agaaccactc tgcattgagg acctctcttc tgagagtacc attgaagcgt tcgttgtatc
     1801 cgttttccca cgggcttcct ggataaatct gaataggctt aataccaacc ttcttgagcc
     1861 aggcttgtaa atcacgggca ataaactctg aaccattatc agaccggatg taatgtggtt
     1921 tgccgtgctt gaggaataag ggataaagcg catccagcac ttcggtgtga cccattcgcg
     1981 gctttgcagc tacatagagg gcttctctgg tgtattcatc aatgacggtc aacatcttgt
     2041 agctgcggcc attgctcagc ttgtcatgaa caaaatcgac actccagata tgacggggat
     2101 attgggggcg caatcgaatg acggaactgt ctttatgata cagccgtctc tgttttttat
     2161 gacggcgcgg taattgtaga ccttcttctc gccacagccg ttcaatcttc ttgtgattaa
     2221 ccacccagcc ttccatgcga agcaactggg caatcttgcg atagccgtac cggccatact
     2281 gcttagcaag acggatcatc gctacacgaa ggtcatcgtc atcaatcttc gcggcggctc
     2341 catatctttg agtgctacgt gccaaaccaa tcgttttgca ggttcgccgc tcagatgtat
     2401 ctagctttt
//
LOCUS       DASCNL010001036         1555 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002126851, whole genome shotgun sequence.
ACCESSION   DASCNL010001036 DASCNL010000000
VERSION     DASCNL010001036.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002126851"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="QF359_13515"
     CDS             <1..294
                     /locus_tag="QF359_13515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87973.1"
                     /translation="PIVLVANKNMLPITIMKINTTTEILRPKISLAKNFTPLYLKTYF
                     EFMLLQTNLGLEKCRISNLLIPDGRLSKLLRHANKLNVVCTGRYRLIVESHAT"
     gene            284..>1555
                     /gene="rsmB"
                     /locus_tag="QF359_13520"
     CDS             284..>1555
                     /gene="rsmB"
                     /locus_tag="QF359_13520"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HJO87974.1"
                     /translation="MPRDFAFDILNATLQLRQPFDEAFEQHKRNTKLKPRDRGFAFNL
                     VITTLRHLGQIDDVLKQCLDKSLPPKAKFARTILRLGICQLLFLETPAHAAVSTSVDL
                     AERQNQGPYKKLINAVLRRVDREACKLTSGQDATTLNTPDWLWQSWCQAYGEDAARQI
                     AAAHLKAPELDLTVIADAASWAQKLDGRLLPTGSIRLPVSTRVQELTGYENGAWWVQD
                     TAASLPARLFGKDLVGQKIADICAAPGGKTAQLLAAGAEVIALDRSDKRLQTLKENLN
                     RLSLTAETICVDAVSWRPEELLDGVLLDAPCSATGTIRRHPDVAYLKRPEDVSHAGQA
                     QFQLLNAATEMVKPGGQIVFATCSLQPQEGPDVIHSFLANHKKWRRQPIEASEVSNCV
                     EFITEAGDLRTLPCHLANLGYMDGFFAARLMH"
BASE COUNT          398 a          373 c          389 g          395 t
ORIGIN      
        1 cctatagtgc tggtggccaa taaaaatatg ctgccgatca ctattatgaa aatcaataca
       61 acaaccgaaa ttttgagacc aaaaatatcc ttagccaaaa attttacccc cttgtattta
      121 aagacctatt ttgaatttat gcttttacag actaatttag gcttagagaa gtgtagaatt
      181 tccaatttgc tgataccgga tggccgtctg agtaaattac tcagacatgc taataagtta
      241 aatgtcgttt gcactggccg gtatcggctg atagtcgaaa gtcatgccac gtgattttgc
      301 cttcgatatt ttgaatgcca cgctgcagtt gcggcaaccc tttgatgagg ctttcgaaca
      361 acacaaacga aacactaagc ttaaaccacg ggatcgtggc tttgccttca atttggtgat
      421 taccaccctt cggcatttgg gtcagattga cgatgttcta aagcaatgcc tggataaaag
      481 tttaccgccg aaagcaaaat tcgcgaggac gattttgcgc cttggcatct gccagttatt
      541 atttttggag accccagccc atgctgccgt tagcaccagc gttgatcttg ctgagcgtca
      601 aaatcagggg ccgtataaaa agctgatcaa tgctgtcctg cgccgggtcg accgagaggc
      661 atgcaaactt accagtgggc aggatgctac cacgctaaac acgccggatt ggctgtggca
      721 gtcgtggtgc caggcctacg gtgaagacgc tgcccgccag attgctgccg cacatttgaa
      781 ggcacccgag cttgatctaa cggtgatagc agacgctgca tcttgggccc aaaaacttga
      841 cggtcggctc ttgccgaccg gtagtattcg tctgccggtg tcaacacgag tacaagaatt
      901 gacaggttat gaaaacggtg cctggtgggt tcaggataca gcggcaagcc tgccggcccg
      961 gttatttgga aaagatttag tgggccagaa aatcgctgat atttgtgccg cacctggcgg
     1021 taagacggcg caacttttag ctgccggggc tgaagttatt gcccttgata ggtcggataa
     1081 aagattgcaa acgctcaaag agaacctcaa ccgactgtcc ttgacggctg aaacaatttg
     1141 tgttgatgcc gtaagttggc ggccggaaga gctgctggat ggtgtgcttt tggatgcgcc
     1201 atgcagtgcc accggcacca ttcggcgcca tcccgatgtc gcttacctaa aacggcctga
     1261 agatgtcagc catgccggac aagctcaatt tcaattactt aatgccgcaa cagaaatggt
     1321 caagcccggt gggcaaattg tatttgcgac atgttctctc cagccccaag aggggccaga
     1381 cgttattcac tcttttttgg caaaccataa aaaatggcgg cgccagccca ttgaagcgag
     1441 tgaagtcagc aactgtgttg agtttattac cgaagccggt gaccttcgaa ccttaccctg
     1501 tcacctcgcc aatctgggat atatggacgg tttttttgct gcccgtttga tgcac
//
LOCUS       DASCNL010001037         3341 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002131377, whole genome shotgun sequence.
ACCESSION   DASCNL010001037 DASCNL010000000
VERSION     DASCNL010001037.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3341)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3341)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002131377"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            315..998
                     /locus_tag="QF359_13525"
     CDS             315..998
                     /locus_tag="QF359_13525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87975.1"
                     /translation="MAMDAADVKYIGKELGADLVGIASADVLNAHPPDPKYPQTPERI
                     WPDCRSVIVIGTHIPAAAFRCPPGPLVQYMDMAVLRRMDRIAWKLSAILEEAGHAAFV
                     TAAQETDWNFKRASYGYLSNRHLAVEAGLGTLGLEVNLLTPEFGPRINFTGILTDLEL
                     EGDTPITEQICIGEGCSRCLYSCPSDAVLHFGIDKRRCATEAQEFGYAQITGFFSKFL
                     HTSAADKKN"
     gene            998..2320
                     /locus_tag="QF359_13530"
     CDS             998..2320
                     /locus_tag="QF359_13530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87976.1"
                     /translation="MASRGLYGFWQGMLRVVGSFGDCPRCLAVCPVGDDYHAYLAEPQ
                     KEIPEKTPERMAKGNEYKEIRQTGGDAPGLNEWNVRWVGPEGYTGKVIKAQRQAFKQL
                     QDVRSVDEETRETGLPVKIPPHGTVLNAELIKECALSFGTDLVGITGPDAVAKGWPTV
                     AGAQDAADTRVIVLAQRMNGGSALITGWNNRQKYYNDELNLDALEGAASKLVTWLDDR
                     GVPAIIIPPPDVDRGRWSGDDADLQTAVEAMAKAAVAAGLGTLGLNQQLLTLEFGPRV
                     VTLAVLCNVPLATDTPQETALCKGADCGRCLSACPADAVGQWDRDWSACGSFRSPHSF
                     AHFTDFLNRIIAEPDIEIKNSMLRSEDSFNIWLSTLRGAGVISGCRRCQDICPVGDDY
                     DDMLKATLEEIPEDTPEKQSRFISLDLSENSIAYRNRAEWIGWLQSNR"
     gene            2411..2533
                     /locus_tag="QF359_13535"
     CDS             2411..2533
                     /locus_tag="QF359_13535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87977.1"
                     /translation="MVDAASVFSDSLGGKERVNYFIEAAFGNTHPSVFNGNKNI"
     gene            2804..>3341
                     /locus_tag="QF359_13540"
     CDS             2804..>3341
                     /locus_tag="QF359_13540"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HJO87978.1"
                     /translation="MPYKDFREFLDFLDKKGELKTCHKEVDTEIEIAKITDKSSKVEG
                     PAILFTNVKGFDTQVVTGLFGNLDRGFLMMDSNKYEAFNKVALALENMIPLNLLNDGP
                     CQEIVKVKNDIDLNEIPTLWHHRKDSHRFITTANCRVKDPVTKICNSSINRVAVLGKD
                     RLTFQSNPPHQLAFIAKQY"
BASE COUNT          863 a          785 c          873 g          820 t
ORIGIN      
        1 tataccttca gctagtaaga tcaatttttg tcataacgag aaaaaaattc ttactaccca
       61 caaaatataa ttaaaaaaat atcagccagc cgtttttagc agagataagc cttggcgcgt
      121 aatggagtta aatatggctg gtcgcgcaac aaagtgccat aggcactaat ggaggacact
      181 tctcaaacaa tctcttctgt tgccaaacgc atatctagat aattgttgga tatacgagca
      241 aagttgttaa tggaacttgc cagtttgaag aagcggtctc gccgattggc aatccggtgt
      301 ttaaagagta aaaaatggct atggatgccg ccgacgtaaa atacattggt aaggagttgg
      361 gtgccgacct ggttggtatc gccagcgccg acgtgctcaa cgctcatccg ccggacccca
      421 aatatcctca gacgccggaa cgcatctggc ctgattgccg gagcgtcatc gttatcggca
      481 cccatatacc ggcggccgcc tttcgttgtc ctccgggtcc gctagtccag tatatggata
      541 tggcggttct ccgccgcatg gataggatag cctggaagct ttccgccatt ctggaggaag
      601 caggccatgc agctttcgtc accgcggctc aggaaaccga ctggaatttc aagcgggcga
      661 gttatggcta tttgagcaac cgtcacttgg ctgtagaggc tggattgggc accttgggcc
      721 tggaggtcaa tttgttgacg cccgaattcg gaccgcgcat caatttcacg ggcatcctga
      781 ccgatttaga gctggaaggc gatacgccca ttaccgaaca aatatgcatc ggcgagggat
      841 gttcacgttg cctctattca tgcccgtcgg acgccgtcct gcatttcggc attgataaac
      901 gccgctgcgc taccgaggcc caagaatttg gctacgccca gatcaccgga tttttcagta
      961 aatttctgca cacctcggca gcagataaaa aaaactgatg gcgtcacgag gattgtatgg
     1021 gttctggcag ggcatgctgc gcgtggtagg ttcttttggc gactgcccgc gctgtctggc
     1081 cgtttgtccg gtgggcgacg actatcacgc ctatttggct gaaccgcaaa aggagatacc
     1141 cgaaaaaacg ccggagcgga tggcaaaggg aaacgaatat aaagaaatcc ggcaaaccgg
     1201 tggtgacgca cctggactga atgaatggaa tgtccgctgg gtgggtcccg agggctacac
     1261 gggtaaagta atcaaggcgc agcgccaagc tttcaaacag ttgcaggatg tccggtcggt
     1321 ggacgaggag actagagaaa cggggttacc ggtaaagatc cctcctcatg gcacggtatt
     1381 gaacgccgaa ttgatcaagg aatgcgccct ttcttttggc actgatttgg tgggcattac
     1441 cggcccggat gccgtggcta aagggtggcc gacggtcgcc ggtgcgcagg atgccgccga
     1501 cacacgggtt atcgttttgg ctcagcgcat gaatggtggg tcggcgctta ttaccggctg
     1561 gaacaatcgc cagaaatact acaacgatga attgaatctg gatgctttgg aaggcgcagc
     1621 ttcaaaattg gttacgtggc tggatgatcg aggcgtcccg gcgattatta ttccaccgcc
     1681 tgatgtggac cgtggccgct ggagtggtga cgacgcggat ttacaaaccg ccgtcgaagc
     1741 catggctaaa gcggcggtag ccgccggtct cggcacgttg ggcctgaacc agcagctatt
     1801 gacattggag tttggacccc gcgtggttac gttggcggtt ctctgtaatg tgccgctggc
     1861 aacggacaca ccgcaagaaa ctgccctttg caaaggcgcc gattgtgggc gctgtctaag
     1921 cgcttgtccg gcggatgcgg tgggccaatg ggatcgcgac tggtcagcct gcggcagttt
     1981 tcgctcaccc cacagttttg cccactttac cgactttctc aaccgcatca tcgccgagcc
     2041 ggatatcgaa atcaaaaaca gcatgctgcg ctccgaagac agtttcaata tctggctcag
     2101 caccttgcgc ggcgccggcg ttatcagcgg ctgccgccgc tgccaggata tctgcccggt
     2161 gggtgatgat tatgatgaca tgctaaaagc aactcttgaa gaaatcccgg aagacacgcc
     2221 ggaaaaacaa tcccggttta tatccttgga cctgtcggag aactccatcg cctatcgaaa
     2281 ccgagccgaa tggatcggtt ggcttcaatc aaataggtaa atatccaacg tcagttattg
     2341 gctattaact gccgaaatca ctgatcacaa atagagtccg ctattggggt gaaagctgct
     2401 attagcagtg gtggttgatg ccgccagtgt cttctccgac tcacttggtg gtaaagaacg
     2461 ggtcaactat tttatcgagg ctgcctttgg caatacccat cccagtgttt tcaacggtaa
     2521 taaaaacatt tgatgggggc ggctgttttt gcctttttat atttctcttt gtccaaattc
     2581 gctggaatca gcttattgat acaggggatt atcctgacag acattatgtt attaatgccg
     2641 cagggtatta tcggcacaat gcgagaaaca aagatttatc agcagtttgt gaagaaggcg
     2701 atttttcagt aaattgaatt ttactatcag ttgatgaaac cccttacaca gaaaaaacta
     2761 tcaacagtgc tagcgtctaa tttttacagg taaggaggca aagatgccat acaaagattt
     2821 tagggagttc cttgattttc tagataagaa aggagagcta aaaacatgtc ataaagaggt
     2881 agacactgag attgagattg ccaagattac tgataagtct tccaaagttg aaggtcctgc
     2941 catacttttt accaatgtga aaggatttga tactcaggtg gttacaggac tgttcggaaa
     3001 tcttgataga ggttttttaa tgatggattc caacaagtac gaggctttca ataaagtagc
     3061 ccttgcgttg gagaatatga tacccctcaa tttgttgaac gacggtccgt gtcaggaaat
     3121 tgtcaaagtt aaaaacgaca ttgatctaaa tgaaattccg actctctggc atcaccggaa
     3181 agacagtcat cgatttatta caactgctaa ctgcagggta aaggatcctg tcactaaaat
     3241 ctgtaacagc tccatcaatc gagtagcagt tctgggaaag gacaggctga cttttcagtc
     3301 caatcctccc caccaattgg cttttatcgc caagcaatac c
//
LOCUS       DASCNL010001038         2249 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002131445, whole genome shotgun sequence.
ACCESSION   DASCNL010001038 DASCNL010000000
VERSION     DASCNL010001038.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002131445"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..672)
                     /gene="mraY"
                     /locus_tag="QF359_13545"
     CDS             complement(<1..672)
                     /gene="mraY"
                     /locus_tag="QF359_13545"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618878.1"
                     /note="First step of the lipid cycle reactions in the
                     biosynthesis of the cell wall peptidoglycan; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HJO87979.1"
                     /translation="MLFNTLAQLADQFAFFNLFRYITFRTGGAMMTALIVSFICGPII
                     IKWLKVHQKKGQPIREDGPEGHLITKVGTPTMGGFMILLALVVSTLLWADLHNGYIWA
                     ALCVTVGYGMISFFDDYIKVTRQNSSGLPGKLKMLLQIFIAIVVTLYIMSLTRDPLST
                     SLAIPFFKTVLIDLGWFFVAFSCLVIVGSSNAVNLTDGLDGLAIGPVMIATGVFALIS
                     YVIGNS"
     gene            complement(662..2098)
                     /locus_tag="QF359_13550"
     CDS             complement(662..2098)
                     /locus_tag="QF359_13550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
                     6-diaminopimelate--D-alanyl-D-alanine ligase"
                     /protein_id="HJO87980.1"
                     /translation="MTDLQQPNVLWQSSEVTKATGGISAMDWSAAGVSIDSRTVEQDD
                     LFIAISGPNFDGHDFVQGALDNGAVAAIVAQAVEGVSAVTPLLKVSDTFVALNDLGRA
                     GRDRTSAKVIAVTGSVGKTGVKEALGQLLSVQGETSYSRGSFNNHFGVPLSLTRLPQN
                     AEYAVFELGMNHAGELTPLSQMVRPIVAIVTTVELAHIEFFSSVDDIARAKAEIFNGL
                     EKGGTAILNQDNEYYELLSDAATAAGAGQVIGFGVHNGAQYKLLDFVLRSDGSSVEAS
                     FNGYRFSYQLAMPGRHWVMNSLAVLATVEAVEADVFAAARDFAQIKPPKGRGERHSIS
                     IGDGSIELIDDSYNANPVSIAAALEVLAQAELGPSGRRIAALGDMRELGDKSADLHQG
                     LATYVAAAGVDLVYAAGPEMKHLCDALPGTISVVHTTTSKILIQPLLDEVQPGDVVLV
                     KGSAGSLMGQVVEALKNLVESKEILNAV"
     gene            complement(2095..>2249)
                     /locus_tag="QF359_13555"
     CDS             complement(2095..>2249)
                     /locus_tag="QF359_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HJO87981.1"
                     /translation="AIFAAVKGLSEGDLLVIAGKGHEQGQIIGDDVLPFDDVEIARQA
                     VEGGGA"
BASE COUNT          595 a          626 c          531 g          497 t
ORIGIN      
        1 agagttacca ataacgtatg aaataagtgc aaagacaccg gttgcgatca ttaccgggcc
       61 aatcgccaag ccatccaacc cgtcggttaa attgacggca ttagaagaac cgacaatcac
      121 caaacaagag aacgctacaa agaaccagcc aagatcaatc agcacagttt tgaaaaacgg
      181 aatagccagc gaggtcgata acggatcacg ggtcaagctc ataatataaa gcgtcaccac
      241 gatggcgatg aaaatttgca gtagcatttt gagcttacct ggaagaccac ttgaattttg
      301 ccgagtgact ttaatgtagt catcgaaaaa actgatcatg ccgtagccca ccgtcacaca
      361 aagtgccgcc catatatagc cattgtgcag atcagcccat aacagcgtcg agaccaccag
      421 cgccaatagg atcataaagc cgcccatggt cggtgtgcca accttagtaa tcagatggcc
      481 ttccggtcca tcttcgcgaa tgggctggcc tttcttttga tggactttga gccatttgat
      541 gatgatcggc ccgcagataa aactcacgat caaagctgtc atcatcgcac caccggtccg
      601 gaacgtgatg taacggaaca agttaaagaa cgcgaattga tcagctaatt gagcaagggt
      661 gttaaacagc attcaagatc tccttgcttt caaccaaatt tttgagagct tcaacgactt
      721 ggcccatcag agaacctgcc gagcccttga cgaggacgac atcacccggc tggacttcgt
      781 cgagtagtgg ctgaataagt atcttggaag tagtagtgtg aaccacactg attgttccag
      841 gcagggcgtc gcacaaatgt ttcatctctg gtccagcggc gtaaactaga tcgacgcctg
      901 cagcggcaac atatgtggcc aatccctgat gaagatcagc tgatttgtcg ccaagctctc
      961 gcatatctcc gagggcggca atccggcggc ctgaaggccc caactctgct tgagccagaa
     1021 cctccagcgc cgccgcgatt gaaaccggat tggcattgta gctgtcatca atcagctcga
     1081 tactgccgtc accaatagaa atactatgcc gttcgccccg gcccttcggc ggtttgattt
     1141 gggcaaagtc gcgggcggct gcgaagacat ctgcttccac agcttcgacg gtggccagca
     1201 cggccagact attcattacc caatgacgcc ccggcatcgc caattgatag gaaaaacgat
     1261 aaccattgaa agaagcttcg acgctcgaac cgtcggaccg cagcacgaaa tccaaaagtt
     1321 tgtattgcgc tccattgtgc acaccgaaac caatgacctg accggcccct gccgcagtgg
     1381 cggcatcaga caataattca taatactcat tgtcctggtt gaggatggca gtgccgcctt
     1441 tctctaagcc gttgaaaatt tcagctttgg cccgggcgat atcatcgacc gaagaaaaaa
     1501 attcaatatg tgccagctct actgtcgtta cgatggcgac gatgggcctg accatctgcg
     1561 acagcggcgt caattcaccg gcatggttca tgccaagctc aaacaccgcg tattcggcat
     1621 tttggggtaa ccgcgtgagc gataacggca caccgaaatg attgttgaaa ctgccacggc
     1681 tgtaagacgt ctctccctga accgacagca attgcccaag tgcttccttg acgccggttt
     1741 taccgacgct gccggttacg gcaatcactt tggcagaggt gcgatcgcgg cccgcccggc
     1801 ctagatcgtt aagtgccacg aaagtatcgc tgactttcag caatggagtt acggcactaa
     1861 ccccctcaac cgcttgtgca acaatcgccg ccaccgcccc attatctaaa gcaccttgaa
     1921 caaaatcgtg accgtcaaaa tttgggcccg agatggcgat aaagagatca tcttgctcta
     1981 ctgtccggct atcaatggag acgcccgctg cactccagtc catagctgat ataccgccgg
     2041 ttgctttagt tacttcgctt gattgccaaa gcacatttgg ttgttgaaga tcggtcatgc
     2101 gccacctcct tcaactgctt gccgggcgat ctcaacatca tcaaagggca gcacgtcatc
     2161 accgatgatc tggccttgct catgaccttt accggcaatt accaaaaggt caccttcgct
     2221 gagcccttta accgccgcaa agatcgctt
//
LOCUS       DASCNL010001039         2854 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002135012, whole genome shotgun sequence.
ACCESSION   DASCNL010001039 DASCNL010000000
VERSION     DASCNL010001039.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2854)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002135012"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(989..2089)
                     /locus_tag="QF359_13560"
     CDS             complement(989..2089)
                     /locus_tag="QF359_13560"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87982.1"
                     /translation="MFFKCAHHAPVAEGSGHVKTVSRNNKHFTVDIHCHIHVPEADEL
                     VRQESPEFTGRTMVDSNPITSKINADQHQTILPKLTDPEVRLKDMDEQGVDVQAISTS
                     PFHYNYFFDAEFTRQTARLVNDRIAKVVAGHPDRFVGLGTVPLQNPKMAVAELDRCID
                     DLGFKGVEISTNVNGQDLTHAGLKKFFAVCEEKNVMIFIHPIGTSYIERMDDHYFRNT
                     IGHPVESALAVGHLVFDGYLERYPGLKICIAHGGGYIPAYSGRFDHPYHLRDDCHQVI
                     TKPPSEYIKKLYFDSVVFTEHQLRYLIETWGPDHIVMGTDYPYDMAEPDPVGHVDSVR
                     GLSEDDKALVMGKNAAHLLGIEVPVKAELYKN"
     gene            2279..2764
                     /locus_tag="QF359_13565"
     CDS             2279..2764
                     /locus_tag="QF359_13565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HJO87983.1"
                     /translation="MKLSDLVGDLGALLKQNEQTISIAESSSGGLISAALLAVPGASA
                     YFAGGGVIYTRDARREFLDLPEDVVTMRAATEEYAMIVAKAVRTKMNTTWGLAETGAS
                     GPSGNRYGDDAGHVCVAVAGPIKKTLTLETGSAEREENMWAFTKAALGQLEEAIKESM
                     K"
BASE COUNT          773 a          687 c          679 g          715 t
ORIGIN      
        1 tgtgcgctga tacccatgat ggctcggaac ataagttcca caatgaagcc gaatacatta
       61 acgcatgacc aaacccgcta tctcaaatta attcttgcaa cacacggtcg gtccatacat
      121 tgggtcatgt gtggacggct cccttttggc aaggattaat ttgacgtttc tgcaaattgg
      181 tcgggtgcag tcatgtgtcc ggcctgttga tgcggcactg attgatggcc gctggcccta
      241 atgcgatccg ccctcaacat tcagacgaat ggctaaactc gaaaaattat ccgctaccgt
      301 cacacgagta attggaggat acgcgattgt cagagcctgg gcggcaacag gatcgcggtc
      361 ctcgtcacat tgaaaagtga cgaattccag ctggtatccc ttttcaatct tctttgttga
      421 aggataaggc acagtgccag ccaacctcat gacgcgcgga aggtccgtga ccggatcgcc
      481 cgagaagtgc gttgccagag caatctgtta gtcctcccag gctttcagat tacgtaccgg
      541 ctcatccagc ttccagtatg cgtgaatatg cagtgacctc ttggttccgt tcggagtgat
      601 ctattactac actggtatcg cttctatcta aatcatcttc aagcgatgtg tcacagagag
      661 cattgacaac tggtgccgct attcacttcc tttttgagac gaaaaagcaa gaaaaacgtt
      721 atttacttac tttaattggt ttggccattc tacactcgag catttttcgg ataagatgat
      781 ctcggtatca aaaagtacga aaaacggtgg ctgttctcca acaccatcag cggtagcaag
      841 aaggtcatca tcaattttac ggaaaaacgc agatacgctg aaaattgagg cttcattata
      901 atctctcata gataacattg ataaattgac ttgaatagac ttcaattata gagagaatta
      961 tataacaaat atgcaaaaat taaggctatc aatttttata taattcagcc tttaccggca
     1021 cctcaatgcc taagagatgc gcagcgtttt tacccatcac cagggctttg tcatcttcgc
     1081 tgagaccccg gaccgaatcg acatgaccga ccgggtccgg ctcggccata tcatagggat
     1141 aatcggtgcc cataacaatg tgatcgggcc cccaggtttc aattaaataa cgcaattgat
     1201 gctcggtaaa aacgacactg tcaaaataga gcttcttgat atattccgac ggcggcttgg
     1261 tgatcacctg gtggcaatca tcgcgcaaat gataggggtg atcaaaacgg cccgaatagg
     1321 cgggaatata acccccgcca tgggcaatgc agatttttaa gcccggataa cgctcaagat
     1381 agccatcaaa caccagatga ccgaccgcca aagcggactc aaccggatga ccgatggtgt
     1441 tacgaaaata gtgatcatcc atgcgctcga tataactggt gccgatcggg tggataaaaa
     1501 tcatcacatt tttttcttcg caaaccgcga aaaatttctt aagaccggcg tgggttaaat
     1561 cctggccgtt gacgttagtt gatatctcga cacctttaaa accaaggtca tcaatgcaac
     1621 ggtcaagttc cgccaccgcc atcttcgggt tttgcaaggg caccgtaccc agcccgacaa
     1681 agcggtccgg atgtccggcc accactttgg caatgcggtc atttaccaga cgcgcggttt
     1741 ggcgggtgaa ttcagcatca aagaagtaat tatagtggaa cggtgaggtt gagatcgcct
     1801 gcacatcaac gccctgctca tccatatcct tcaagcgcac ctcaggatcg gtcagcttcg
     1861 gcaaaatagt ctggtgctgg tcagcattaa tcttagaggt gatcggatta ctatcgacca
     1921 ttgtgcgacc ggtgaattcg ggagactctt gcctcaccaa ctcatccgct tccggtacat
     1981 gaatgtggca gtggatatcg acggtgaaat gcttgttgtt gcgggaaacc gttttaacat
     2041 ggccggaacc ttctgccacc ggggcgtgat gcgcacactt gaaaaacata agctgatcca
     2101 ttttgtaatt ttaagttggc ggaattaaag cgatcagaag acacacactc aagtcttatt
     2161 ttggacctat tagccggcgg cggtataatt tgattttcca aacggtaatg aaaccttgtt
     2221 tccaaaaacc gcataatatc ttacattttg atggtcgaaa ttcttggagt tcacatttat
     2281 gaaactatcc gacttggttg gtgatctcgg cgcgctttta aaacaaaatg agcaaacgat
     2341 ttccatcgcc gaatcctcat ccggcgggct gatatcggcg gcgctgttgg ctgtccccgg
     2401 cgcgtccgcc tattttgccg gtggtggcgt gatctatacc agggacgctc gaagagaatt
     2461 tctcgacctg cccgaagatg tagtcaccat gcgggcagcg accgaagaat acgccatgat
     2521 tgtggccaag gccgtccgga ctaaaatgaa cacgacctgg ggcctagcgg aaaccggtgc
     2581 cagcgggccc agcggcaatc gttacggtga tgatgccggc catgtctgtg ttgccgtagc
     2641 cggaccaatt aaaaaaacat tgacccttga aactggcagt gctgagcggg aagaaaatat
     2701 gtgggcgttt accaaagccg cgcttgggca gcttgaagag gctatcaaag aaagtatgaa
     2761 atgacttaaa ttagctcttt aattccgcca atgagtcccc aaaaaaaata agtgagggat
     2821 cacatgttta ttcacccggt aacgtttaat ctcg
//
LOCUS       DASCNL010001040         2959 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002136598, whole genome shotgun sequence.
ACCESSION   DASCNL010001040 DASCNL010000000
VERSION     DASCNL010001040.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002136598"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /locus_tag="QF359_13570"
     CDS             <1..873
                     /locus_tag="QF359_13570"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HJO87984.1"
                     /translation="PFIFIKGRVLFGAGFDPVNFLSTLEKEKITLAPLVPTVWRMVMA
                     AEPEKYDLSYLKTAFYSGEPGSESLVEDLQAKICVNVMTSYLTSEGGCASGVIAGSDI
                     LSKEGQAASTGKPVKDTEVRIIDPEGSFDDQLPAREIGEIALKSASIAIGYYGDAEGT
                     KNKFFAGWWRSGDLGYLDENGLLFVKGRLDNRINTGGIKVYAEEVEAALLKHPAVQMA
                     AVVGVDDKKWGQRIEAHLVASETVGEDELVNYCLDQELLPKTHVPKAIHFHDTLPIGP
                     TGKLYRRGLIFKSN"
     gene            928..1896
                     /locus_tag="QF359_13575"
     CDS             928..1896
                     /locus_tag="QF359_13575"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJO87985.1"
                     /translation="MTILDGQRVIAIEEHYYDDQVTKHFQGLDGKLGGFIKDKIVDVG
                     EGRIASMDECGIDVQVLSHGAPSTQKLDAESGPAVATAANDHLYQICQANPDRLAGFA
                     ALATANPKAAVDELERAVTKLGMKGAMIHGLTGGELFIDDQQFWPIFERAEALDVPIY
                     LHPGIPHQKVIDVYLKDYIKQYPGFLNAGWGFTMETATASIRLVLSGVFEKYPNLKII
                     LGHLGETLPFLMWRIDLALNRPGNDGVAFRDIFTSHFYITTSGFFSDPALMLCIQEMG
                     VDRILFAIDYPFVPNDPGPKWMETVMLNAEDKAKILHRNSERLLRM"
     gene            complement(1901..2137)
                     /locus_tag="QF359_13580"
     CDS             complement(1901..2137)
                     /locus_tag="QF359_13580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87986.1"
                     /translation="MIKVTDVQYTWVSVTDLDLAEKFLTDLGLVRLARTVKALYMRSS
                     DADHHCYISELNEQDEPGYTGTALEQLTKKGMSA"
     gene            2265..2852
                     /locus_tag="QF359_13585"
     CDS             2265..2852
                     /locus_tag="QF359_13585"
                     /inference="COORDINATES: protein motif:HMM:NF019958.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJO87987.1"
                     /translation="MSKVDNKPKRFTEVLDAAAEVFAEKGYHGASTTDIADKLEIKQA
                     GIYYYFKSKDSALAEVCRLGVQGYVERLIVISQADLSADRKIREAIREHMQPFHDLPN
                     YVQVFQYERRYLAGESRAEVNKLASKYEGELCRLFEAGVAAGDFRQDLDCKLATLALL
                     GMCNSVTVWYDGKSKKQIQRIADHYADFIIGGILR"
BASE COUNT          782 a          636 c          781 g          760 t
ORIGIN      
        1 ccgtttattt tcattaaggg gcgggtgttg tttggtgctg gttttgatcc ggtgaatttt
       61 ttgtcgacgc tggaaaaaga aaagatcacg ctcgcaccac tggtgccgac cgtatggcgg
      121 atggtgatgg cggccgagcc ggaaaaatac gatctctcgt atttgaaaac cgcgttttac
      181 tcaggtgagc ccggctccga aagtctggtc gaagatttac aggcaaaaat ttgcgtcaac
      241 gtcatgacgt cttatttaac ctcggaaggc ggctgcgcgt cgggcgtgat cgcggggtcg
      301 gacatattgt cgaaagaagg gcaagcggca tcaaccggca agccggttaa agataccgaa
      361 gtacggatta tcgatccgga aggatcattc gacgatcaat tgccggcaag ggagatcggc
      421 gaaatagccc ttaaaagtgc gtcgattgct atcggctatt atggtgatgc agaaggaact
      481 aagaataagt tctttgccgg ctggtggcgg agcggtgatc tcggatatct cgatgaaaat
      541 gggctgcttt ttgttaaagg acggctcgat aaccgcatca ataccggcgg gataaaggtc
      601 tatgccgagg aagtagaggc cgcgcttttg aaacatccag ccgttcaaat ggcggcggta
      661 gtaggtgttg acgataaaaa atgggggcag cgcattgaag cccacctggt ggcgagtgaa
      721 actgttggcg aggatgagtt agtgaattac tgcctcgacc aggaattgct gcctaagacc
      781 catgtgccga aagctattca ttttcatgat acactgccga tcgggccgac tggtaagctt
      841 taccggcgcg gactgatttt caagtctaat tgacaaaatc tcaaaatacg caaagattac
      901 gaacaacaaa taaaggggag aaacgccatg actattctgg acggtcagcg cgtcattgcg
      961 attgaagaac actattatga tgatcaagtc accaaacatt tccaagggct tgatggtaag
     1021 ctcggaggtt tcataaagga taaaatagta gatgtcggcg aaggccgaat cgcctcaatg
     1081 gacgagtgcg gcatcgatgt tcaggtgtta tcccacggtg cgccctcaac ccaaaaattg
     1141 gacgcagaat ccgggcctgc cgtggcgacg gcagcgaacg atcatcttta ccaaatttgt
     1201 caggccaatc cggaccggct cgcaggtttt gccgcactgg cgactgccaa ccccaaagcg
     1261 gcagtcgatg aactggaacg cgcggttacc aagcttggca tgaaaggcgc aatgatccat
     1321 gggctgactg gaggcgaact atttatcgat gatcagcagt tctggccgat ttttgagcgc
     1381 gctgaggcct tggacgtacc aatttacttg catcccggca ttccccatca aaaggtgatc
     1441 gatgtttatc ttaaagatta tatcaaacaa tatccggggt ttttaaacgc cgggtggggt
     1501 ttcacgatgg aaaccgcaac cgcaagtatt cggttggtgt tgtcgggagt gtttgagaaa
     1561 tacccaaatc tcaaaattat tcttggccat ttgggtgaga ctttgccgtt cttgatgtgg
     1621 cgcatcgatc tcgcgcttaa tcggcccggt aatgacggag ttgctttccg ggatattttc
     1681 acgtcgcatt tttatatcac gacgtcagga tttttctcgg acccggcatt gatgttgtgt
     1741 attcaggaga tgggggtgga tcgcattcta tttgctattg attatccgtt tgtgccgaat
     1801 gatcccggcc cgaaatggat ggaaaccgtc atgttaaatg ccgaagacaa agcaaaaatt
     1861 ctgcaccgca attcggagcg gttattaagg atgtagccgt ttacgcgctc ataccttttt
     1921 tcgttaattg ctccaacgcc gtgccggtat aacctggctc atcctgctca ttcagttcag
     1981 agatgtagca atggtgatca gcgtcactgc tgcgcatgta aagcgcctta actgttcgag
     2041 ccaagcgcac caggcccaaa tcggttagaa atttctccgc cagatcaaga tcagtcacgc
     2101 tgacccacgt atattgaaca tcggtgactt tgatcatgtt gcgccctccc gtagctaggc
     2161 aacataatgg gttaaaagca tttgccgagc atgataccaa atttgcacat ctgaacccat
     2221 tgacgtatta ttttataact taataaaatt ttataggttt ctaaatgtcg aaagttgata
     2281 ataagccaaa gcgctttacc gaggtattgg atgcggcggc ggaagttttt gcggaaaaag
     2341 gctatcacgg tgcaagcact acggatattg ccgataaatt ggagatcaag caggctggca
     2401 tttattacta ttttaaatct aaagattcag cgttggctga ggtttgccgg ttaggtgtgc
     2461 agggctatgt cgaacggctt atcgtaatct cacaggcaga cctttccgct gatcggaaaa
     2521 ttcgagaagc tatccgagaa catatgcagc cctttcacga cctgccaaat tatgttcagg
     2581 tatttcaata cgagcgccgt tatttggctg gtgaaagtcg cgctgaggta aataaactgg
     2641 cgagcaaata tgaaggcgaa ctgtgccggc tgtttgaggc tggcgttgcc gctggtgatt
     2701 ttcgccaaga tttagattgc aagctggcca ccttagcatt gctcggtatg tgtaattccg
     2761 taacagtctg gtatgatgga aaatcaaaaa aacaaattca acgcatcgcc gatcactatg
     2821 ctgatttcat tatcggtggt atattaaggt aggttgatac ggctacatct aggcgacaaa
     2881 cggagttttt tggcgtgact gataaagaag ataaatcaga attgtacaat caatcggacc
     2941 ggtaggaaga agaaatctc
//
LOCUS       DASCNL010001041         1342 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002139183, whole genome shotgun sequence.
ACCESSION   DASCNL010001041 DASCNL010000000
VERSION     DASCNL010001041.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1342)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1342)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002139183"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            128..1306
                     /locus_tag="QF359_13590"
     CDS             128..1306
                     /locus_tag="QF359_13590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HJO87988.1"
                     /translation="MESVITYDSQLATYACHPQASRGRLYPESESATRTCFQRDRDRI
                     IHSAAFRRLEYKTQVFVNHEGDHYRTRLTHTLEVAQIARTLARCLGLNEDLAEALALA
                     HDLGHPPFGHAGEYALSDLMAPYGGFDHNAQSLSVIVRLERRYPNFDGLNLTWETLEG
                     IVKHNGPLVGSESNKPLPREITDYNAKNDLKLETYASGEAQVAALADDIAYNNHDIDD
                     GLRAELFNMEDLFDLPGGGEIFQKVVAGFPDIGKSRQRHEAVRDLIGAMVTDCLTETQ
                     QRLKEAAPSNVVDIRALGRPVVSFSEAMHEIDRSLKDFLFSNMYRHDRVNEMTIKARD
                     VVSELFNLLLAEPEKLPVEWQHNIDGKNNEQTAQVVADYIAGMTDRFAYDEHGKLVSK
                     "
BASE COUNT          341 a          308 c          346 g          347 t
ORIGIN      
        1 agttacgcgc aggctggtcc ggggcccagt cttctatttg gtgcacctgg attctggtgt
       61 tcgccagaat aacagacgta aataactctt ataggactgt taagcattat tagctaagtt
      121 gtccgttatg gaatcagtaa ttacttatga tagccaattg gcgacctacg cgtgccatcc
      181 tcaagcgagc agaggacggc tttatcctga gtccgaaagc gcaacccgca cctgttttca
      241 gcgcgaccgg gatcgcatta ttcactccgc cgcttttcgc cgccttgagt ataagaccca
      301 ggtttttgtt aatcatgagg gcgatcacta tcgcacgcgc ttaacccaca ccttagaggt
      361 cgctcaaatc gcccgcactc tggcacgctg tttgggtctc aatgaggacc tcgcggaagc
      421 cctcgccctg gcccatgatt tgggccatcc accgtttgga cacgctggtg aatacgcctt
      481 gtcggatttg atggcgcctt atggcggctt tgaccacaat gctcaatcct tatcggtgat
      541 tgtacgcttg gagcgccgct atcctaattt tgatgggtta aacctgacct gggaaaccct
      601 ggaggggatc gtcaaacata atggcccgct tgttggcagt gagagtaata agccgctgcc
      661 gcgtgagatt acagactaca acgccaaaaa cgatttaaag cttgaaacct atgccagcgg
      721 tgaagcgcag gttgcggccc tagccgatga tatagcttat aacaaccacg atatcgatga
      781 tggtttgcgg gcggaattat ttaacatgga ggatttattt gatctcccgg gcggtggtga
      841 gatttttcaa aaagtggttg ctggttttcc agatattggc aaatcgcggc agcgtcatga
      901 agcggttcgc gatctgatcg gggcgatggt gacagattgt ttgacagaaa cccagcaacg
      961 gttaaaagaa gccgcaccgt caaatgttgt tgacatccgg gcactcgggc gtccggtcgt
     1021 ttcgttttct gaagcaatgc atgagattga tagaagtctc aaagactttc tattttcaaa
     1081 tatgtatcgc cacgaccggg tgaacgaaat gacaattaag gcgcgcgatg ttgtcagtga
     1141 attatttaat ttattgctgg cagaaccgga gaaactgccg gtcgaatggc agcacaatat
     1201 agacggtaaa aataatgaac agacagcgca ggtggttgct gattatattg ccgggatgac
     1261 tgaccgcttc gcctatgacg aacatggtaa attagttagc aagtaatcga aataattatg
     1321 agtaatgccc taaaccattt ta
//
LOCUS       DASCNL010001042         1263 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002139945, whole genome shotgun sequence.
ACCESSION   DASCNL010001042 DASCNL010000000
VERSION     DASCNL010001042.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002139945"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /gene="sucA"
                     /locus_tag="QF359_13595"
     CDS             <1..603
                     /gene="sucA"
                     /locus_tag="QF359_13595"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621976.1"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HJO87989.1"
                     /translation="HALRRQVKRNFRKPLIVMSPKSLLRHKLNVSALDEMGPGTHFRR
                     VIPEVDKLAAKDKVKRVVLCSGKVYYDLLEARREQCIKDVAIVRVEQLYPWPRMRITN
                     QIKLYQNAEVVWCQEEASNQGAWHFAADRIDYILESLDKKAKKTRRVLYVGRTASASP
                     AVGSLKVHNKEQELLVEQALNGKAKDLIQPFMPIKHGKKS"
     gene            620..>1263
                     /locus_tag="QF359_13600"
     CDS             620..>1263
                     /locus_tag="QF359_13600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJO87990.1"
                     /translation="MAIEIKVPTLGESLTEATVATWLKSVGDAVAADEPILELETDKV
                     TMEVNAPVAGTLTEISAEAGAEVEVGALLGVIGDGAAAAVPAPAAAPKETPAPVASDD
                     DVQMSPAVRKLIEDEGYDATQIPATGKDGRLTKGDVLAFQKSGGVLVAPAPAAAPAPA
                     ADSGAPSHQIPSVPAGPREERVKMTRLRKVIAGRLKDAQNTAAMLTTFNEVDMSA"
BASE COUNT          326 a          315 c          353 g          269 t
ORIGIN      
        1 cacgctttgc gccgtcaggt gaaacgtaat ttccgcaaac ccttaatcgt aatgtcgcca
       61 aaatccttac tgcgtcacaa gctcaacgtc tcggccttgg atgaaatggg cccgggaacg
      121 catttccgcc gggttatacc ggaagtggac aaacttgctg ccaaagacaa agtaaaacgc
      181 gtcgtattgt gttcgggcaa agtctattat gatttgctgg aagcgcgccg ggagcaatgc
      241 atcaaagatg tcgccatcgt ccgggttgag cagctttatc cgtggccgcg catgagaata
      301 accaatcaga tcaaactcta tcagaatgcc gaagtagtgt ggtgccagga agaagcttcc
      361 aatcaaggcg cgtggcattt tgctgccgat cgcattgatt atattcttga aagcttggat
      421 aaaaaggcca agaaaacccg ccgcgtgctt tatgttggcc gtacggcttc ggcgtcaccg
      481 gccgtcggat cgcttaaagt tcacaacaaa gaacaagaat tgctggtcga acaggcgctc
      541 aacggtaaag caaaagattt aattcaacca tttatgccga ttaaacatgg taagaaatca
      601 taggtgaatt gaggatacta tggctattga gattaaagtc cccacacttg gcgaatcgct
      661 gacggaagcg acggtcgcaa cctggctcaa atcggttggt gatgcggttg cagcggacga
      721 gccgatcctc gaattggaaa ccgataaggt caccatggaa gttaatgcgc cggtggctgg
      781 tacgttgacg gaaatttccg ccgaagccgg tgctgaagtg gaggtcggtg cgctgttggg
      841 cgttattggt gatggtgcgg cagcggcggt gccggctcca gcagcagcgc caaaagaaac
      901 cccggcaccc gttgcttccg atgatgacgt gcagatgtca ccggcggtac gcaaacttat
      961 cgaagatgaa ggctatgatg cgacccaaat cccggcgacc ggcaaagatg gccgcctgac
     1021 caaaggtgac gtactggcct ttcaaaaatc aggtggtgtc ttggtagcgc cagctccggc
     1081 tgcggcacct gccccagctg cagatagtgg tgcaccgagt catcaaatac catcggtacc
     1141 ggcgggcccc cgtgaagaac gggtgaaaat gacccgtctc cgcaaagtca tagccggccg
     1201 tttgaaagat gcgcaaaata ccgctgccat gctgactact tttaacgagg tcgatatgtc
     1261 agc
//
LOCUS       DASCNL010001043         3031 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002140890, whole genome shotgun sequence.
ACCESSION   DASCNL010001043 DASCNL010000000
VERSION     DASCNL010001043.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002140890"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="QF359_13605"
     CDS             <1..250
                     /locus_tag="QF359_13605"
                     /inference="COORDINATES: protein motif:HMM:NF028178.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HJO87991.1"
                     /translation="IDTYTNGFMSQIVVRADLSADLVYKMTKAMFDNLKEMHASAVTL
                     KPVGLDDPFKSGNAPLHPGALRFYKEIGKKIPQRLLGG"
     gene            367..2346
                     /locus_tag="QF359_13610"
     CDS             367..2346
                     /locus_tag="QF359_13610"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HJO87992.1"
                     /translation="MSEQVQQDQDNRLIRYSVFLVAFLMAVTGIANSMPTYNILPPFG
                     PFPAVIIRPLILGASIFLVLASSPFTHTVTAKWPNRKWLGPLIDIVLLLAGWAVLWIY
                     YTEQIAIENEGFAEFTMFHVAVSITAAAVFVVLSWKVWGAPLSIVSLVALFYFYTGEH
                     WPWIFKTAPLDLVYSAEDLWFNLNDGILGNIMGILIFTVFPFILLGTMLERTGGGRSM
                     IKLAVHVTKRFRGGPAHAAIMASSLFGTMSGGAVTNVVATGVITIPMIKQRGFSPAFA
                     GGVEATASSAGQIMPPIMGAAALVMSDLTGIPYLTIIVAALLPALAYYASLFTSVVFE
                     ARRLGVEIGGEDLDRKDLEVTPQDYINMIMIVVPIVIVVASLIQGLSAAGAGMSAFFT
                     IIPLSFLNPEVRHRPFIIVEALSHTGLTFGRLLMAIAVVGIIVAVLGATGLPQDFAIL
                     INEVSGGNLFLTLFVTGLAALMLGMGMPTLPAYLTIVLILGPAMQGLGLTLIVAHLFV
                     FYYGVASSITPPVAVAAYAAASIAQAAPIKTATMALRVGLVKFAVPFVFAYYPVLLIV
                     PEAFPKGSVGFNWPDFVSILFRLMLFIYLISSTVIAFDQRRLPWWEMILRLVFAGGVM
                     FAVPLVHWTAVVLALFYIAWHQKNFGRKTPTKVHP"
     gene            2501..>3031
                     /locus_tag="QF359_13615"
     CDS             2501..>3031
                     /locus_tag="QF359_13615"
                     /inference="COORDINATES: protein motif:HMM:NF013086.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJO87993.1"
                     /translation="MKIREFSIDVLVLGGGLAGTNAAMGAADMGADVIVVEKGSNIDR
                     SGDIGGGVDHFLAYLNTGPEWDTEDSFLDYVDKVGRGTTHLSYLESLYCAELQPAIER
                     MAKIGNPLTQPDGTFYRTASMGQPGPYFINFNGKLLKPKLGAAVRQSGCKVFNRIMTV
                     DLLTKEGRVVGAMGFQN"
BASE COUNT          608 a          804 c          813 g          806 t
ORIGIN      
        1 catcgacact tacaccaacg ggtttatgtc tcaaatcgtg gtgcgtgcgg atttgagcgc
       61 ggacctggtc tacaaaatga ccaaagcgat gttcgacaac ttgaaggaga tgcatgcctc
      121 ggccgtgacc ttaaaaccgg ttggcctgga tgatcccttt aagtcgggta atgcgccgct
      181 tcatccggga gcactcagat tctacaagga aataggaaag aaaattccgc agcgtctatt
      241 gggcggctag taccaactac gacgatctag aaccggtcgt gttatcgaac ccagatcatt
      301 tggcttggcg gtgccgattg cgccgccaag ctttatgatg ttttatcgaa tgatcggcag
      361 gttcccatga gcgaacaagt gcagcaggac caagacaacc ggctaatccg atattcggtt
      421 tttttggtgg cttttctgat ggcagtaacc ggtatcgcca attccatgcc tacctataat
      481 attttaccgc cgttcggacc atttccggcg gttatcatcc ggccgctgat tttgggggcg
      541 tcgatttttt tggttttggc gagcagccct tttactcaca cggtcaccgc caaatggccc
      601 aatcgcaaat ggctgggacc gcttatcgac attgtcctcc tccttgccgg ttgggccgtg
      661 ttgtggatct attatacgga acagattgcg atcgagaacg aaggctttgc cgagtttacg
      721 atgtttcatg tggcggtttc gatcaccgcc gccgcggtgt tcgtggtcct gagttggaag
      781 gtgtggggcg cgccgctgtc gatcgtgtcc ttagtcgctt tgttctattt ttacaccggc
      841 gaacattggc cgtggatttt caaaacagcc ccgctcgatc tggtctacag cgccgaggac
      901 ctttggttca atttgaacga tggcatcctc ggcaatatca tgggaattct catcttcacc
      961 gtctttcctt tcatattgtt gggaaccatg ctcgaacgta cgggtggtgg acggtccatg
     1021 atcaaactcg cagtccatgt gacaaaaaga ttccgcggcg gcccggccca tgcggcgatc
     1081 atggcgtcaa gcctgttcgg caccatgtca ggcggcgccg tcactaatgt agtagccacc
     1141 ggggttatca ccataccgat gatcaagcag cgcggttttt cccccgcttt cgccggtggg
     1201 gttgaggcaa cagcctcaag tgccggtcag atcatgccac caatcatggg agccgctgcc
     1261 ctcgtcatgt cggaccttac tggaattccc tatttgacca ttatcgttgc cgctctccta
     1321 ccggcgctgg cctactatgc cagtctcttt accagcgtcg tgttcgaggc gcgccgcctt
     1381 ggcgttgaga tcggcggtga ggatctcgat cggaaagact tggaggtaac gccccaggat
     1441 tacattaata tgatcatgat cgtggtgccg atcgttattg tggtggcaag cttgattcaa
     1501 ggcctgtccg cagccggtgc cggtatgtcg gcatttttta ccattatccc gctcagtttt
     1561 ttgaatcccg aagttcgcca cagacctttc ataatcgtag aagcactctc tcataccggg
     1621 ctgacattcg gacggctttt gatggcgatc gctgtcgttg gtatcatcgt ggcggtgttg
     1681 ggcgccaccg ggttgcccca ggacttcgcc atcctgatca atgaagtgtc gggcggcaat
     1741 ctgttcttga ccctttttgt aaccgggctt gcggcgctga tgttaggcat gggaatgcct
     1801 actttgccag cctatttgac aattgtactg attttaggtc cggctatgca gggattaggg
     1861 ctgacgctga tcgtcgccca tttatttgtc ttctactatg gagtggcttc gtcgatcaca
     1921 ccgccggtgg cggtggcggc ctatgctgct gcatcgattg cccaagcagc ccctatcaaa
     1981 accgctacca tggcgttgcg tgttggtttg gtgaagttcg ccgtgccctt tgtcttcgcc
     2041 tattatccgg ttctattaat cgtgcccgaa gccttcccga aggggtccgt cggtttcaat
     2101 tggccggatt ttgtttccat tctctttagg ctgatgctct ttatctatct gatctccagc
     2161 accgtgatcg ccttcgacca acgccgactg ccttggtggg aaatgattct ccggctggta
     2221 tttgccggtg gggttatgtt cgcggtacca ttggtgcact ggactgcggt cgtcctggct
     2281 ttattctata tcgcctggca tcaaaaaaac ttcggacgga agactccaac caaagtgcat
     2341 ccgtgacggc attgtcagag taaatcggct tgaacctgat agtgaggtac cttagctttg
     2401 ggcaatgcat atgttctact agtgtcccac gcggcggctc ctggatcaac cctcccggga
     2461 gcctgcgctc cagcgaaatt tatgtaagag ggaagaagtc atgaaaatta gagagttttc
     2521 catcgatgta ttggttcttg gcggcggcct cgccggcacc aacgcggcca tgggcgccgc
     2581 cgatatgggt gccgatgtaa tcgttgttga aaaaggcagt aacatagacc gttccggcga
     2641 tatcggcggt ggcgtcgatc atttcctggc ctatcttaat accggccccg aatgggacac
     2701 ggaagactca tttttggatt atgtggataa agtcggcagg ggtaccaccc atctttccta
     2761 tttggaatcc ctctattgcg ccgaactgca accagccatc gaacgcatgg ccaagatcgg
     2821 caaccccttg acccagcccg acggcacttt ttatcgcact gcttccatgg gacaaccggg
     2881 accgtacttt atcaatttca acggcaaact tttgaaaccg aaactgggcg ccgccgtacg
     2941 tcaatccggc tgcaaggtct ttaaccggat catgacggtc gatctcttga ccaaggaagg
     3001 tcgcgtggtt ggcgccatgg gcttccagaa c
//
LOCUS       DASCNL010001044         1604 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002155573, whole genome shotgun sequence.
ACCESSION   DASCNL010001044 DASCNL010000000
VERSION     DASCNL010001044.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002155573"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(272..1174)
                     /locus_tag="QF359_13620"
     CDS             complement(272..1174)
                     /locus_tag="QF359_13620"
                     /inference="COORDINATES: protein motif:HMM:NF015431.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HJO87994.1"
                     /translation="MSYPIDHRLIRQFLATVEHGNITAASNALHISQPALTKNIRKLE
                     EMLGVKLLERHSRGVDATSYGEILVRRGKLVELEFEYAAAEIEAMKGGTKGTIRIGTS
                     PVFATLYMPKVSAAIVQSNPGLKIDLTIGVLDTLVPSLLQGDLDIICSALDFPDHPEI
                     VKEHLIDFEHAVFARAGHSLADRTNIEAKDLMAFEWIMLAQDHVAISRLGSYFSANGI
                     SPPRIAMETNSFEVAFSMVKEGDFLTSATSSMVEFAQSVGLALLDVRGTLWHFPAGVA
                     YRRTTSTPSAINAVIENLKKVVQP"
     gene            1375..>1604
                     /locus_tag="QF359_13625"
     CDS             1375..>1604
                     /locus_tag="QF359_13625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87995.1"
                     /translation="MSHEVDPGSGLQLYELSHVWGFGVPSLPGIDDVAMFRNVKHGQN
                     GVMTHHFKTVMHTGTHMNAPIHLVQGGVGVAG"
BASE COUNT          439 a          355 c          382 g          428 t
ORIGIN      
        1 atccctaata tatcctcttc tgaaaagcgc ttccgtgtca ttactaccct ccaaactaaa
       61 ctcgttatta taacaaaact ggatcagtta taggggggca ggacactcgt taaccaaagg
      121 aataaagaat aatgtccgct tagggcgcag tctcaaccgg tcgctataac acatgcgtta
      181 aatctctaac cagttggcga aattcctatc caaatgcgat ggctgttttt taaaactggt
      241 gctgcgagca ctaaacgaga aagcggccta attagggctg aactactttt ttcaagtttt
      301 cgataacagc gttaatggcg cttggtgttg aggtggtacg ccgataggca acacctgcgg
      361 gaaagtgcca aagtgttccc cgaacatcga gtaatgcaag tcccaccgat tgggcaaatt
      421 caaccattga agatgtagcg ctggttaaaa aatctccttc tttgaccata gaaaaggcta
      481 cctcgaaaga atttgtttcc atggcaatcc gcggtggact gatgccattg gctgaaaaat
      541 acgaaccaag cctgctgatg gcgacatgat cttgcgccag cataatccat tcaaatgcca
      601 tcaagtcttt ggcttcaata ttggttcgat cagctagaga gtgaccagcc cgggcgaaga
      661 cagcgtgttc gaaatcgatt aaatgttcct tcacgatctc cgggtggtcg ggaaaatcca
      721 aggcagaaca tatgatgtcg agatcacctt gaagcaagct cgggacgagc gtatccaaaa
      781 cgccgatcgt gaggtcaatc ttaagcccgg gatttgattg cacgattgcc gctgatactt
      841 tcggcatata gagcgtggca aaaaccggac tggtgccgat gcggattgtt cccttggtgc
      901 cgcctttcat tgcttcgatc tcggcagcag cgtattcaaa ttccaattcg acgagcttgc
      961 cgcgacggac caaaatttca ccataagatg tggcgtcaac gccgcgagag tgacgttcga
     1021 gcaattttac ccctagcatt tcttcgagtt ttcgaatgtt ttttgtcagc gctggctgac
     1081 ttatatgaag tgcattactg gccgccgtga tgttgccatg ctcgacggtt gccaaaaatt
     1141 gcctgatcag gcgatggtcg ataggatagg acacttacaa aacttcctct gatattccta
     1201 aaaagcatat atttttgaat ttagctcaat gaaaataact gtttttagcc attcttgtcc
     1261 acaaaatata acttcaggtt atggtaatgg tgcgatcaaa cattggacgt tttttttaat
     1321 ctgatccact ataggtaatg attatgaata aaaaactcag aggaggacca gagtatgagt
     1381 catgaggttg atccaggttc gggactgcaa ttatatgaac ttagccatgt ttgggggttt
     1441 ggcgtgccct cgctgccagg tattgatgat gtggcgatgt ttcgtaacgt caaacatggg
     1501 cagaacggtg ttatgacgca tcatttcaaa acagtgatgc acacaggcac ccacatgaac
     1561 gctcccatcc atttggtcca aggcggtgtg ggggtagcag gtat
//
LOCUS       DASCNL010001045         1725 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002163170, whole genome shotgun sequence.
ACCESSION   DASCNL010001045 DASCNL010000000
VERSION     DASCNL010001045.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002163170"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            394..1302
                     /locus_tag="QF359_13630"
     CDS             394..1302
                     /locus_tag="QF359_13630"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1932 domain-containing protein"
                     /protein_id="HJO87996.1"
                     /translation="MSKPTIGLMSPGDMGHTVAGVLVEKGHRVVTVLSGRSDLTKKRA
                     ERAGMESVADLAALVSESDFIFSIMPPDQAADFAADIAVIIKESGERTVFVECNAISP
                     DTTLTIEAMLKDAGATMINAGIIGPPPGRGPMTNFYASGADLDLVSFIDGDGIKFKPM
                     EDDITKASAIKMCYAGLTKGMMTLHTSVLVTAELLGISEELQNEIANSQKFHWEGMNK
                     RVSMYACDAGRWAGEMDQISETFGSAGVTAKLHQGAADIFRMLDASPLSVETRETYDK
                     SRTLQQAVEIYAAAAQKINNGKKAAE"
     gene            1403..>1725
                     /locus_tag="QF359_13635"
     CDS             1403..>1725
                     /locus_tag="QF359_13635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO87997.1"
                     /translation="MGTMLRIGLTCLIILLLVVAIVVFKGSGIVQLISLRFAVALIIA
                     VWLVKRMGNVHELQSQNSLQAIDLNTKKLIGIINNSFNSQGIDKIGRKTQQTIVETLK
                     GEQNG"
BASE COUNT          466 a          363 c          448 g          448 t
ORIGIN      
        1 gtgattgcga tggtgatatg cgcattttcc atcgcggcga tgtggattgc cggcccgcgc
       61 aatgtcatcc tcaccgcggg tcaggctcgc aaactttaat cgaaaacgga aattgttccg
      121 cttaatgatt gtccgataaa ctacaggttt cctcggctgc aattctccca ccgctgaacc
      181 aagtcagctt gccgattttt taggacgaat cagccaattt ggccgatgtt caatccggcg
      241 gaaaagaaaa acaagttcca gcagatgatc gtcgccatcg gttccgggcg gagagagaaa
      301 tacaccatca tcgcaacttc ttgtctggtg tgttgctctt ttggcaggtt aaaataagaa
      361 aaattaaatt taagatttaa gtaagggaag ctaatgtcca aaccaacgat aggtcttatg
      421 agtcctggcg atatgggcca cactgtcgcc ggcgtgctgg ttgagaaagg ccaccgggtt
      481 gttacggtct tatccggacg tagcgatctg accaaaaaaa gggcagaacg cgctggtatg
      541 gaaagtgttg ccgatcttgc ggctctcgtt agcgaaagtg attttatttt ctcgatcatg
      601 ccgcccgatc aggcagcaga ttttgccgcg gatattgcgg taattattaa agaaagtggt
      661 gagcgcacgg tctttgtcga atgtaatgcc atctcgcccg atacaacttt gaccattgag
      721 gcgatgctaa aagatgccgg ggcgaccatg ataaatgccg gtatcattgg gcctcctccc
      781 ggtcgcggac caatgacgaa tttttatgcc agtggtgccg acctggatct cgttagtttt
      841 attgacggag atgggattaa gtttaagccg atggaagatg atatcaccaa ggcgtcggca
      901 attaaaatgt gttatgccgg actgactaaa ggcatgatga ccctgcacac gagtgttttg
      961 gtgacggccg aattgctggg tatcagcgaa gaacttcaaa acgaaattgc aaacagtcag
     1021 aaatttcatt gggaaggcat gaacaagcgc gtttccatgt atgcctgtga tgccgggcgc
     1081 tgggccggtg aaatggatca aatatctgaa acctttggtt ccgccggagt aacagcgaaa
     1141 cttcaccagg gggcggcgga tatttttcgc atgttggatg catcgccctt aagtgttgaa
     1201 acccgggaaa cttacgataa aagcagaacg ctgcagcaag cggtcgaaat ttatgctgcg
     1261 gctgctcaaa aaataaataa tggaaaaaag gcggcggaat aggtgttttt tgggctgttg
     1321 aaatccacag taagtattcg cgtagaatta gaatattatt agagtggttc aacaccgcta
     1381 atagaatttt tagggaattt ttatgggtac aatgttgcgt ataggcctga cctgcctgat
     1441 tatattgctg cttgttgtgg ctattgttgt cttcaaaggg tccggcattg tgcaactcat
     1501 atccctacgc tttgccgtgg cattgattat tgccgtttgg ctggtcaaac gcatgggcaa
     1561 tgtgcatgag ttacaaagcc aaaattcgct tcaagccatt gatcttaata ccaagaagct
     1621 gattggtatc atcaacaaca gttttaatag tcaaggcatc gacaagatcg gccgcaaaac
     1681 ccaacagacc atcgttgaaa ctttgaaagg tgagcagaac ggcga
//
LOCUS       DASCNL010001046         1354 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002167095, whole genome shotgun sequence.
ACCESSION   DASCNL010001046 DASCNL010000000
VERSION     DASCNL010001046.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1354)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1354)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002167095"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="QF359_13640"
     CDS             <1..279
                     /locus_tag="QF359_13640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HJO87998.1"
                     /translation="ATLVNATSLGMQGQPALEIDLGKLPNTALVTDIVYTPLETDLLK
                     NAKACGNPTVDGLGMLLQQARPGFAAWYGVEPEVTDDLRNYVVSRMVN"
     gene            279..902
                     /gene="coaE"
                     /locus_tag="QF359_13645"
     CDS             279..902
                     /gene="coaE"
                     /locus_tag="QF359_13645"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728914.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HJO87999.1"
                     /translation="MYILGLTGSIGMGKTTAANAFRHYSVPVYDADTAVHQLTEPGGK
                     AVEAVGEAFSGVVKNHGVDRQLLGPQVFDDKAALARLEDILHPLVRQIQLEFLRQAAK
                     RHEKLVVLDVPLLFEVGSDQLCDAIAVVTAPAYLQHIRVLSRDGMTEDRLVQVLESQL
                     PDAEKRKYADFLIQTSLGKNFSLLCSGNISEICKDQIGHRWSPRLKS"
     gene            918..>1354
                     /gene="dnaQ"
                     /locus_tag="QF359_13650"
     CDS             918..>1354
                     /gene="dnaQ"
                     /locus_tag="QF359_13650"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HJO88000.1"
                     /translation="MREIVLDTETTGFRQNDGDRIVEIGCIELVNHVATGNTYHQYIN
                     PERDMPDEAFGVHGLSEEFLIDFPVMADVIDAFIEFIGDAPLVIHNAEFDMGFINAEL
                     GLLGQKPLPMSRSVDTIRMAREKFPGAPASLDALCRRFSIDNS"
BASE COUNT          325 a          306 c          366 g          357 t
ORIGIN      
        1 gcgaccctcg ttaatgccac cagtttgggt atgcagggtc agccggcgct cgaaattgac
       61 ctaggaaagc tgcctaatac tgcattggta acggatattg tttacacacc tcttgagacc
      121 gatcttttga aaaatgccaa agcatgcggt aacccaacgg ttgatgggtt ggggatgcta
      181 ttacaacaag cgcggcccgg atttgctgcc tggtatggcg tcgagcctga ggtaacggat
      241 gatcttcgca actatgttgt tagtaggatg gtgaactgat gtatatcctc ggtctcacag
      301 gttcgatcgg catgggtaaa actactgctg ccaatgcctt caggcactac agcgtgccgg
      361 tctatgacgc cgatacggcg gtgcatcaac tgacggagcc tggtggtaaa gccgtcgaag
      421 ccgttgggga ggctttttca ggtgtcgtta aaaaccatgg tgttgaccgc caattactgg
      481 ggccacaagt atttgatgac aaagcagcgt tggcccggct cgaagatatt ctccacccgt
      541 tggtgcgcca aattcagctg gagtttttac ggcaagccgc caagcgccat gaaaaattgg
      601 tggtgctaga tgtgccgtta ctgtttgaag tcggcagtga tcagctgtgt gacgccattg
      661 ccgtggtaac ggcaccggcc tatttgcagc acattcgtgt gttgtccagg gacggtatga
      721 cagaggaccg gctggtccag gtgcttgaga gccagctgcc ggatgcggag aaaagaaaat
      781 acgctgattt tcttattcaa actagcctgg gtaagaactt cagtttattg tgtagtggta
      841 atattagtga aatctgcaaa gatcaaattg gtcatagatg gtcgccccga ctaaaatcat
      901 agaggcgtta tatttttatg cgtgaaattg ttctcgatac tgaaaccacc ggctttcgcc
      961 aaaatgatgg tgatcgcatt gttgaaattg gctgcattga gttggtcaac catgttgcca
     1021 ctggcaatac ttaccaccaa tatattaatc ccgaacgcga catgccggat gaagccttcg
     1081 gcgtacatgg gctgagcgaa gagtttctca ttgattttcc ggtaatggcg gatgtcatag
     1141 atgcctttat cgaatttatc ggtgatgccc cgctggttat tcacaacgct gaatttgata
     1201 tgggctttat caatgcggaa ctcggcttgc tgggtcagaa accactgccg atgtcgcgct
     1261 cagttgatac catacgtatg gcgcgtgaaa aatttcccgg cgcaccggcc agtcttgacg
     1321 cgctatgccg ccgtttcagt attgataatt ccaa
//
LOCUS       DASCNL010001047         1008 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002168102, whole genome shotgun sequence.
ACCESSION   DASCNL010001047 DASCNL010000000
VERSION     DASCNL010001047.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1008)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1008)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002168102"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..920
                     /locus_tag="QF359_13655"
     CDS             <1..920
                     /locus_tag="QF359_13655"
                     /inference="COORDINATES: protein motif:HMM:NF014717.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HJO88001.1"
                     /translation="VPGTGDYKRVASLRGRIVKIAGVPVEQVNISPGVEWAVRGDRAL
                     TYAATPAEGTEIIAGQWWPENYSGPPLISIDANLARGFGIGLGDNLTLNILGREIKAK
                     ITSLRKIDWRSIRFDFAIIFAPGTLEAAPHSHIAAIQAPKELEDRIEKEVGDRFNNIS
                     IIRVREALQAAATMLDGIGAAVRSTAAVTILGGTLVLAGAVAAGRRRRIYDAVVFKVL
                     GATRRTILKAFLLEYGLLSVATSIISAVIGTLTAWAIVVFLMDMNWVFIPATVWTTIA
                     ICLIVTLIIGFAGTWWALGQKAAPLLRNE"
BASE COUNT          225 a          261 c          272 g          250 t
ORIGIN      
        1 gtgttcccgg taccggcgat tataaacgcg tcgcctcgct cagaggccgc atcgtcaaaa
       61 ttgccggggt gccggttgag caggtcaata tttcacccgg cgtcgaatgg gcggtgcgcg
      121 gtgatcgcgc cctgacttac gctgctacac ctgccgaggg cactgaaatt atcgccggcc
      181 agtggtggcc ggaaaactac agcggtccac cgctaatatc tatagatgcc aatcttgccc
      241 gaggctttgg tatcgggctc ggtgataatt tgacgctcaa catattgggt cgggaaatta
      301 aggccaagat cacctctttg cgaaaaattg attggcggtc tatccgcttt gatttcgcca
      361 ttatatttgc accgggcact ttggaagctg caccccatag ccatatcgct gccatccagg
      421 caccaaaaga gcttgaagac agaattgaga aagaggttgg cgaccggttc aataacatct
      481 cgatcattcg ggtgcgcgaa gctttacaag cagcggccac aatgctggat ggcattgggg
      541 cggcggtcag atcaaccgcg gcggtaacga tcctgggcgg cacgctggtg ctggcgggcg
      601 ctgttgcagc cgggcggcga cggcgcattt atgatgcggt ggtgtttaaa gtattgggtg
      661 caacccggcg cacgatctta aaagcttttc tgttagaata tggcctgttg agtgtcgcga
      721 cctccatcat ctcagcggtt atcggcaccc tcaccgcctg ggctatcgtc gtatttctga
      781 tggatatgaa ctgggttttc atcccagcaa ccgtctggac caccatcgcc atctgcctaa
      841 ttgtgacgct gattatcggc tttgccggaa catggtgggc cttaggccaa aaagccgccc
      901 ctctcctgcg caatgaatga gaaatatccc ttaaatataa aggattaacc tttttaaatt
      961 taacgtgacc ttactataat ttaatacggt ttctcttgat ctcaggcc
//
LOCUS       DASCNL010001048         3067 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002168146, whole genome shotgun sequence.
ACCESSION   DASCNL010001048 DASCNL010000000
VERSION     DASCNL010001048.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002168146"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="QF359_13660"
     CDS             <1..684
                     /locus_tag="QF359_13660"
                     /inference="COORDINATES: protein motif:HMM:NF012791.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HJO88002.1"
                     /translation="DMAQLPPEYIEQQTELSDEDAKKAELIFYEIVKNADVDHEWRKA
                     EGNPVDVIRLQSRYCDLLILGQRNPNAANQFGDLPDGVILTIGRPVLIVPYSSDIRNI
                     GTRVMVGWDASAQAARAVHDAIPLINDAGKVDIIAINPNDGDEHGETPCADISLHLSR
                     HGINVEAQSITVNDIGIADILLSRAADKGVDLFVMGAYGHSRWRELVLGGVTAHMLDH
                     MTMPVLMAH"
     gene            complement(856..1512)
                     /locus_tag="QF359_13665"
     CDS             complement(856..1512)
                     /locus_tag="QF359_13665"
                     /inference="COORDINATES: protein motif:HMM:NF012257.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HJO88003.1"
                     /translation="MLDDAELELLNKGRVTKEYLPGEVIFHEGDPCRGVFCLETGMVG
                     VRKTDADGNSVLLYLVTPGDTLGYRAMLAGEDYRASAEALEPTRICVIDVPTVRSLLG
                     HNPALGLRYLKRVSMSLGNAEEKILHNATLSVRARFAHLLLVLIDKYGEKSTNGPTEF
                     ELPLSRHDLASMIGTTPESMSRTIKKMESDGVARFTGRTVHIPEIETLVQEFEPDHFV
                     "
     gene            1857..2069
                     /locus_tag="QF359_13670"
     CDS             1857..2069
                     /locus_tag="QF359_13670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO88004.1"
                     /translation="MDVTDPSSIRAAAVKFIERFGSEAKHQADIRANELLLAGNYQGR
                     TRWQLIGKEIKHLAENSEISQKTAVN"
     gene            2452..>3067
                     /locus_tag="QF359_13675"
     CDS             2452..>3067
                     /locus_tag="QF359_13675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO88005.1"
                     /translation="MAEEFDPAEVKQACERYVKKKGALTFGLANLETLERISPLGCGP
                     SAMLPKVKSVLCVGVGGGTRGAWSADAKTLAYIGDTETMAYRVAYGLAFFLEAKFGYR
                     SIFVPPDMDPEKGARVPLQSMKFHAEVAGIGARSMAGDILLHPEYGMMYYASVFTEIE
                     LLPDEPMAESPCPHSSCVKLYRQSGQTPCMRFCPVECLSGSIGDD"
BASE COUNT          811 a          728 c          731 g          797 t
ORIGIN      
        1 gacatggcgc aactgccacc tgaatatatc gaacagcaga ccgagctttc ggatgaagat
       61 gcgaaaaagg ctgagttaat tttctacgag attgtcaaga acgccgatgt cgatcatgaa
      121 tggcgcaaag ctgaaggcaa cccggtcgat gttattcggt tgcaatcaag atattgcgat
      181 ttgctgattt taggacagcg aaatcctaat gcggctaatc aatttggtga tctacccgat
      241 ggggtcattt taactatcgg tcgcccggta ttgattgttc cctatagcag cgacataaga
      301 aatatcggca cacgggtaat ggttggctgg gatgcaagcg cccaagcggc acgcgccgtt
      361 catgatgcta ttccgttgat caatgatgcc ggaaaagtcg acattattgc gattaatcca
      421 aatgacggtg atgagcatgg tgaaacacct tgtgccgaca ttagcctgca tctctctcgc
      481 cacggcatca atgtcgaagc ccagtcgatt actgtaaatg atatcggtat cgctgatata
      541 ttattgtcgc gggcagccga taaaggagtc gatttatttg tcatgggcgc ctatggacat
      601 tcgcgctggc gcgagctggt gttaggcggt gtcaccgcac atatgcttga tcacatgaca
      661 atgccagtac tcatggcgca ctaattttaa gttcaatctg cggtattccg ataactgata
      721 attctcgatg atagcttggt gttgagattt aagcttgtcg atcacctttt gaaatcgggc
      781 gacaattttg tcgggagtgt tcttattcct aacatggtga tcgctttttc tctttcaagg
      841 ggtgtgcgct aaagtttaaa cgaagtgatc cggttcaaat tcctggacca aagtctcaat
      901 ctccgggatg tgaacagtgc ggccggtaaa tctagctacc ccatcagatt ccattttctt
      961 gatcgttcgc gacattgact ccggcgtcgt gccgatcatt gacgccaaat catgacgtga
     1021 tagcggcaat tcgaactcag ttggtccatt agtgctcttc tcaccatatt tatcaattag
     1081 caccagcaac aaatgggcaa accgggcgcg cactgaaaga gttgcgttgt gaagaatttt
     1141 ttcttccgca ttaccgagcg acatcgacac gcgtttgaga tagcgcaagc ccaaggccgg
     1201 attatgcccc agcaaagatc gtacggtcgg cacatcaatg acgcagatgc gtgttggttc
     1261 caaagcttct gcactggccc ggtaatcttc acccgccagc atggcacggt agccaagagt
     1321 gtcgccgggt gtcactaaat agagcagcac cgaattaccg tcagcgtccg ttttacgaac
     1381 accaaccata ccggtttcca aacaaaacac gccacggcag ggatcacctt catggaagat
     1441 cacttcgccc ggcagatatt ctttggtcac acgcccttta ttgagcagtt ccagctcagc
     1501 atcgtccagc acgcaccatt cagtccggtc gcgtgtctga cacgtaaaac aatttaaaga
     1561 accctggtct ggattctggt ctgccatcat attccctcag attactcaaa agaaaaaatt
     1621 atttctttcg aataacaatg tgttcgattt gaccatcgtc aatttattta ttttctagag
     1681 actataaaat tgcatcaact ttcgcaatcg gttcttagca gactatggcc cacagagatc
     1741 agcgttgttc aaggttcctt aggtactcac aggcagctct ttgcccgtcg gatagttccg
     1801 gtgcgcgtcc accggtccat caaactaatg attcccaaga taggcgtaaa aacaacttgg
     1861 atgtcaccga tccctctagt attcgagctg ctgcagtcaa atttatagaa agatttggca
     1921 gcgaagcgaa gcatcaggcc gacatccgcg ccaacgaatt gctgttggcg ggcaattatc
     1981 aaggccgcac cagatggcaa ttaattggaa aagaaattaa acatttggca gaaaatagcg
     2041 aaatttcgca aaaaactgcc gtcaattgat aaatatcaag gcattaaatc caaaaatctg
     2101 ggaagtttac cgaagttgag ggagcgatac cggaaagatc agtaggtcag gaaactaaaa
     2161 cgatactgag taggtgggag aaatgtagaa ttgaatttag gaatttctgc taccccgaca
     2221 gattatatct gatgatatat tcttaccggg atagctctcc ggcgatctga tcgccagttg
     2281 ggtcttccta ccgacccaac acatgttccc tgagactgat tgggtctggt gatttattca
     2341 ccagacccat ttttttaagt ttttattttt cgatagatct attgaaaata ttatcaaaac
     2401 cgcctaccct cgtcaacaat tcgaaataac gaagcaccag gataaataat tatggccgaa
     2461 gagtttgatc ccgcagaagt aaaacaagcg tgcgaacgtt acgtcaaaaa gaaaggcgct
     2521 ttgacttttg gcctggctaa tctggaaaca cttgaacgta tctcgccgct gggatgcgga
     2581 ccttcggcga tgttgcccaa ggtgaaatca gtattatgcg ttggtgtcgg gggcggcacc
     2641 cgaggcgcct ggtcagcgga tgctaaaacc ctcgcttata ttggcgatac tgaaaccatg
     2701 gcgtatcgcg tcgcctatgg tttggcgttt tttctcgagg ctaagtttgg ttaccgctca
     2761 atctttgtgc caccggatat ggacccggaa aaaggtgccc gggtacccct gcaaagcatg
     2821 aaattccatg ccgaagtcgc cggtattggt gcgcgctcaa tggccggtga tatcctgctc
     2881 catccggaat atggtatgat gtattacgcc tccgtcttta ccgaaataga attgctaccg
     2941 gacgagccaa tggctgaaag cccgtgcccg cattcatcct gcgtcaaact ttaccgccaa
     3001 tccggtcaaa caccgtgcat gcggttttgc ccggtggaat gcttgagcgg ctcaatcggc
     3061 gatgatg
//
LOCUS       DASCNL010001049         1427 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002168401, whole genome shotgun sequence.
ACCESSION   DASCNL010001049 DASCNL010000000
VERSION     DASCNL010001049.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1427)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1427)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002168401"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(12..665)
                     /gene="ccmA"
                     /locus_tag="QF359_13680"
     CDS             complement(12..665)
                     /gene="ccmA"
                     /locus_tag="QF359_13680"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011387801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HJO88006.1"
                     /translation="MAEFTGNNLTCIRGERVVFAKLTFAIGEGEVLYLRGPNGSGKST
                     LLRLMAGLLRPVGGQILWNGESTLENAKTYRDLLHYIGHQDAIKTVLTVEENLTFWAE
                     MSGVDPAKRSVGEALENFSLSHLASLPARFLSAGQRKRLNLARICASPAPLWLLDEPA
                     NSLDKASVGVLRSAITAHQEKGGLVAVATHEELSPESNVLNISEFTNNMRSPKENVA"
     gene            complement(745..1044)
                     /locus_tag="QF359_13685"
     CDS             complement(745..1044)
                     /locus_tag="QF359_13685"
                     /inference="COORDINATES: protein motif:HMM:NF019590.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HJO88007.1"
                     /translation="MLIEMRLYTTHPGQAATFARLYQDEGLPIQLPVGGNLTGFYRQD
                     VGDPNQVILIWQYKSYEDRLVRRDELFKIPEWLAFLQKAAPLVQSEENKLLTAVS"
     gene            1120..>1427
                     /locus_tag="QF359_13690"
     CDS             1120..>1427
                     /locus_tag="QF359_13690"
                     /inference="COORDINATES: protein motif:HMM:NF015325.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HJO88008.1"
                     /translation="MTSVLVLFHSVTGSTYRLAEAIAAGIDSVDDCQANLRRVPKIGG
                     SEVIFGGNDMAEPRAQFEHVPVAKIEDLITHDALAIGTPVYFGAQSSALRYFLDQAGK
                     "
BASE COUNT          327 a          349 c          387 g          364 t
ORIGIN      
        1 ccagaacacg ttcatgccac gttttccttt ggggatctca tattattggt aaactcggag
       61 atgttgagaa cgttactttc tgggctgagc tcctcatgag tggcgacagc gaccagaccg
      121 cctttttcct gatgcgccgt tatagccgac cgaagaacac caaccgaggc tttatccagg
      181 gaatttgccg gttcatccag cagccaaagc ggcgccgggc tggcgcaaat gcgggcgaga
      241 ttgagtcgct tgcgctgacc agctgataaa aatcgcgccg gcagtgaggc gagatggctg
      301 agtgaaaaat tttcgagtgc ctcgccgacg ctgcgctttg caggatcgac gccgctcatc
      361 tcagcccaaa atgtgagatt ttcttcaacc gttagcacgg ttttaatcgc atcttggtgg
      421 ccgatataat gcagcagatc cctgtaggtt ttggcatttt ccagggtgct ttcaccattc
      481 cacaaaattt gaccgccaac cggtcgcaat aagcccgcca tcaaacgcag caatgttgat
      541 ttgccgctgc cattgggccc gcgcaagtag agcacttcgc cttcgccaat cgcaaaggtg
      601 agcttggcga agaccacgcg ctcaccgcga atacaggtca gattattgcc ggtaaattct
      661 gccatggccc atagatatct gaggaagacc ctcgagacaa taagattaaa aatacttcga
      721 tggttgacct aagggtggtc tcgatcaact cactgctgtt agcaatttat tttcttcaga
      781 ttgcaccagg ggtgcggctt tttgcaggaa agccaaccat tcggggattt tgaacagctc
      841 gtcccggcgg accagtcggt cttcatagga cttgtactgc caaattagaa ttacctgatt
      901 ggggtcaccg acgtcctggc gataaaagcc ggtcaaattg ccgccgaccg gtaattggat
      961 tggtagtccc tcgtcctggt aaagcctggc aaaggtggcg gcctggcctg ggtgagtggt
     1021 ataaaggcgc atttcgatga gcatggatgc tattcctctc ggctaaattt tgcggtactt
     1081 taggggtgca cttcattgtt tgacaagggt agttaattga tgacgtcagt tttggtttta
     1141 tttcatagcg tgaccggcag tacttaccgg ctcgccgaag ccattgcggc ggggattgat
     1201 agtgttgatg actgtcaggc gaatttgcga cgggtgccga aaattggagg ctcggaagtc
     1261 attttcggtg gcaatgatat ggctgagccc cgcgctcaat ttgaacatgt tccagtggcc
     1321 aagattgaag atttaatcac gcacgatgcc cttgccatcg gcaccccggt ttattttgga
     1381 gcgcaaagct cggccttgcg gtatttcctg gatcaagcgg gtaaata
//
LOCUS       DASCNL010001050         1473 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002171838, whole genome shotgun sequence.
ACCESSION   DASCNL010001050 DASCNL010000000
VERSION     DASCNL010001050.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1473)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1473)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002171838"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            314..982
                     /gene="hisG"
                     /locus_tag="QF359_13695"
     CDS             314..982
                     /gene="hisG"
                     /locus_tag="QF359_13695"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HJO88009.1"
                     /translation="MLSNDKLVLALPKGRILEEVMPLVNRAGIEPEAAFADEESRKLR
                     FATNHPDLNIVRVRSFDVATFIAFGAAHFGVSGLDVLMEFDSSEIYAPIDLDIGHCRI
                     MVAEPADMAPEDNPQRWSHIRVATKYPEITRRHFAARGVQAECIKLNGAVEIAPSMGL
                     CSRIVDLVSTGSTLKANGLVEVEEIARITSRLAINRTALKTRSDKMTHWIERFREAVD
                     AVAA"
     gene            966..>1473
                     /locus_tag="QF359_13700"
     CDS             966..>1473
                     /locus_tag="QF359_13700"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF013013.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HJO88010.1"
                     /translation="MPWRLKSTDASFASDFQNFLNIKREAQTDVEAMVTKIVEDIRAR
                     GDQALIEYTSTFDRFDLTAETIRISVDEIAAAYKTCGPEQLGALQLAVARIHSFHEKQ
                     IPENISYEDQDSVKLGLKWGAVNSVGMYVPGGLASYPSSVLMNAIPAKVAGVKRLVMV
                     VPTPEGEIN"
BASE COUNT          359 a          389 c          387 g          338 t
ORIGIN      
        1 agattatccc tttaatgagg ccgtcaaatt ccggggacac tttttttgcg tgatttatcg
       61 gtacttgagg acgtaaccac agtgtcttct ttttaatcca cccgtcatgc actggcttga
      121 cccgtgcatc catatttaaa gaccgcttcg agatggatac gcggatcaag tccgcatatg
      181 acggtgaggg aaaagccaac aagatgtccc caccccaagt ttcaattgac gaagcctaac
      241 aaaattgtag ccaactcctt gaaaaccctc taataatgcg cccgcccaac taaatacttg
      301 gggagataaa cccgtgttat caaatgataa actcgttctc gcgttaccaa agggccgcat
      361 acttgaagaa gtcatgccct tggtgaaccg cgctggcatc gaaccggaag cggcgtttgc
      421 cgacgaagag tcgcgcaaac tgcgctttgc gacgaaccat ccggacctca atatcgtccg
      481 cgtacggagt ttcgacgttg ccacctttat tgcgtttggc gccgcccatt ttggtgtctc
      541 cggcctggat gtgctgatgg agtttgatag ctcggaaatt tatgcaccga tcgatctcga
      601 tattggccac tgccgcatca tggttgctga acccgccgat atggcgccgg aagacaaccc
      661 acagcgctgg agccacatcc gggtagcgac caaatatccc gaaatcactc ggcgtcactt
      721 tgctgcccgc ggtgtccagg ccgaatgcat caagctcaac ggggcggtgg aaattgcgcc
      781 gtcgatgggg ctgtgttcgc gcattgtcga tctggtttcg accggctcga cattgaaagc
      841 caacgggttg gttgaagtcg aggagattgc taggattacc tctcgcctgg cgatcaaccg
      901 gacggcgctt aaaacccgct ctgacaaaat gacccattgg atcgagcgtt tccgtgaggc
      961 cgtcgatgcc gtggcggctt aaatcaacag acgccagctt cgcatcagat tttcagaatt
     1021 ttctaaatat caaacgcgaa gctcagaccg acgtcgaggc aatggtgacc aagatcgtcg
     1081 aggatatccg tgcgcgcggt gatcaggcgc tcattgagta tactagcaca ttcgaccgct
     1141 ttgatctgac ggcagaaacc attcgaattt cagtcgatga aatcgcggcg gcttacaaaa
     1201 cctgtggccc tgaacagctt ggtgctttgc aactggcggt agcgcgtatc cacagctttc
     1261 atgaaaagca aataccggaa aatatcagct atgaagatca ggacagcgtt aagcttggcc
     1321 ttaaatgggg ggcagtcaac tcggtaggca tgtacgtgcc aggcgggctc gcgtcttacc
     1381 catcctccgt cctgatgaat gccattccgg ccaaagtcgc cggggttaaa agactggtga
     1441 tggtggtgcc gacaccagag ggagagatca atc
//
LOCUS       DASCNL010001051         2470 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002172912, whole genome shotgun sequence.
ACCESSION   DASCNL010001051 DASCNL010000000
VERSION     DASCNL010001051.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002172912"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="QF359_13705"
     CDS             complement(<1..981)
                     /locus_tag="QF359_13705"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HJO88011.1"
                     /translation="MGMLIDGNWADDDKFRNKDGKFVRPESIFRHWITPDGSAGPDGQ
                     KGFKAEPDRYHLYVTHNCPWAYRSVVFRKLKGLEGIISIAVGGSTYKDEGWTFNDEPG
                     AIPDSVNNIHHLHELYTKAEPAYTGRVTVPTLWDKKEQTIVSNESSEIIRMFNSSFDG
                     LTNNNNDYYPVELSSDIDVINETVYANVNNGVYRTGFAATQEAYEEAFDNLFNTLDDL
                     EERLAQQRYLVGDRLTEADWRLFSTLLRFDIVYYGHFKCNKKHIYEYPNLWNFTLELY
                     QHPGVAEVTNFDHIKRGYYHLRPQLNPLGTVAKGPALDFNHPHDREKIIKA"
     gene            complement(1089..1961)
                     /locus_tag="QF359_13710"
     CDS             complement(1089..1961)
                     /locus_tag="QF359_13710"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJO88012.1"
                     /translation="MRNTKLFGGQSDSIIGISLALLSALLLAFNGAIGKQLGQELHPF
                     FLNFIRAFIMVVMLLPWILRRGTRGIRTSRPGLQFINGFFFAVALSAWFWALPRIPLD
                     LITAVGFTAQTFAVLGAILFLKEKSEPWRWGALLVGLIGALIIVRPGVEEISPGVLAI
                     LISAICFAVSRLVVKVITRTEAPESVVFWQAVWTAVVAFPVALFFWQLPNWEQTVWII
                     ALSVVTIMNHFAMTWSVKLADISIIEPISFTRLIWAAIVGYFLFSDVPNVFTLIGGAV
                     VLASVIYIARRERQ"
     gene            complement(1967..>2470)
                     /locus_tag="QF359_13715"
     CDS             complement(1967..>2470)
                     /locus_tag="QF359_13715"
                     /inference="COORDINATES: protein motif:HMM:NF013706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJO88013.1"
                     /translation="LDPKAGEQFDYEGELVAVIGKGGRHISEDNALDYIVGYTIMNEG
                     SVRDWMAMGTQNTPAKNFYRSGGIGPWIATVDEVDDPAVQHIYTRRNGTVMQDAGTDL
                     MIFDTKYLIAHTSKFTQLEPGDMIATGSPAGSIIGTEKKDWLKPGDVVEVEIPSIGKL
                     SNTVAAE"
BASE COUNT          688 a          623 c          572 g          587 t
ORIGIN      
        1 ggcttttata atcttttccc ggtcatgggg gtgattaaaa tcaagcgccg gtcctttggc
       61 gacagtgccg agcggattta gctggggcct aaggtggtaa tagccacgct ttatatgatc
      121 aaaattggtg acttcggcca cacctggatg ctgatacagc tcaagagtaa agttccataa
      181 attgggatac tcatagatat gctttttgtt acatttgaaa tggccgtaat aaacgatatc
      241 gaagcgcagc agtgtcgaaa acaagcgcca atcggcttcc gtcagtcgat caccaaccag
      301 atagcgctgc tgagcgaggc gctcttccaa atcatcaagc gtgttgaaca aattatcaaa
      361 tgcttcctcg tatgcctctt gggttgcggc aaagccggtg cggtaaacgc cattgtttac
      421 attggcatag acggtttcat taatcacatc gatatctgaa ctaagctcga ccggataata
      481 gtcgttgttg ttattggtta gcccgtcaaa ggatgagtta aacattctaa taatctcgga
      541 agattcattg ctgacaatgg tttgctcttt tttatcccag agtgtcggta cggtaacgcg
      601 accggtataa gccggctccg ccttggtata aagctcatgg agatggtgga tattgttaac
      661 gctatcgggg atcgcgcccg gctcgtcatt aaacgtccag ccttcatctt tataagtcga
      721 gccgccaacc gcaatactga tgatgccctc tagccctttg agcttacgaa acacgaccga
      781 gcggtaggcc cacgggcaat tatgagtaac atagagatga tagcggtccg gctcagcctt
      841 gaaacctttc tgaccgtcgg gtccggcaga gccatccggt gtgatccaat gcctaaaaat
      901 gctctccgga cggacaaact tgccatcttt attgcggaat ttgtcgtcgt ctgcccaatt
      961 tccgtcaatg agcataccca ttaaagcctc accaaattaa attctaggaa ttaattcgta
     1021 taccgaacaa tcttgggggc agttgatagc ctatgaccta ggaagagtca cgaacatttg
     1081 cggcctagtt attgcctctc gcgacgcgca atatagataa cggatgccaa gacgaccgcg
     1141 ccaccaatta aggtgaacac atttggtaca tcgctaaaca gaaaataacc gacaatcgca
     1201 gcccagataa gacgggtaaa ggaaatcggt tcaatgatac tgatatcagc aagcttaact
     1261 gaccaagtca tggcaaaatg attcattatc gtgacgacgg atagggcgat gatccagacg
     1321 gtctgttccc aattgggtaa ttgccaaaaa aacaaagcga ccggaaacgc cacaacggca
     1381 gtccaaacag cttgccaaaa aactacagat tccggcgcct cggttcgtgt gataacttta
     1441 acaactaatc tgctaaccgc gaagcatatg gcggaaatta gaatggcgag aactccaggt
     1501 gagatttcct caactcccgg ccgaactata atcaaagcac cgataaggcc gacgagtaac
     1561 gctccccagc gccaaggttc ggacttttcc tttagaaaca ggatggcccc gagcacggca
     1621 aacgtttgcg ccgtaaaacc tacagcggta attagatcaa gcggaattct cggtaatgcc
     1681 caaaaccaag ccgacaaagc aacggcaaaa aagaagccat tgataaactg gagtccgggt
     1741 cgcgaagttc tgatgcctct agtgccccgc cgcaatatcc acggcagcaa catcaccacc
     1801 atgataaagg cgcgaataaa gttaagaaaa aacgggtgca gttcctgacc gagctgtttg
     1861 ccgatggcgc cattgaacgc cagtaaaagc gctgatagca aggccagaga aataccgata
     1921 atactgtcag attggccgcc aaagagtttg gtgttcctca ttagagttat tcggcagcga
     1981 ctgtattcga caatttgcca atactgggaa tttcaacttc aaccacatca cctggtttga
     2041 gccagtcttt tttttctgta ccgataatcg agcccgccgg actaccggta gcaatcatgt
     2101 cgccgggctc aagctgagta aacttcgacg tatgagcaat cagatatttg gtatcaaaaa
     2161 tcatcagatc ggtgccggca tcctgcatca ccgtaccatt gcgccgcgtg tagatgtgct
     2221 gtactgctgg atcgtcgact tcatccaccg tcgcaatcca cgggccaata ccgcccgagc
     2281 ggtaaaagtt tttagctggc gtattttgcg tacccatcgc catccagtca cgcacgctac
     2341 cttcgttcat aatcgtatag ccgacaatat aatcaagcgc gttatcttcc gaaatatggc
     2401 gcccgccttt accaataacc gcaaccagct cgccttcata gtcaaactgc tcacctgcct
     2461 tgggatcgag
//
LOCUS       DASCNL010001052         1467 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002180369, whole genome shotgun sequence.
ACCESSION   DASCNL010001052 DASCNL010000000
VERSION     DASCNL010001052.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1467)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1467)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002180369"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..395
                     /locus_tag="QF359_13720"
     CDS             <1..395
                     /locus_tag="QF359_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJO88014.1"
                     /translation="NVHDLPTKLSGGMRQRTALARTLMEDRPVVLMDEPFSALDAITR
                     IRLQDMAAELLNDRTVLLVTHDPLEALRLGDRIHVLAGRPVTLDEPLIPVGVRPRDLH
                     DPAVLAGQADLLERLSAANSILLGETAA"
     gene            392..1141
                     /locus_tag="QF359_13725"
     CDS             392..1141
                     /locus_tag="QF359_13725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJO88015.1"
                     /translation="MKVLRPFIIFVALIALWQAIVGVTGAPHYILPSPGLVLKALTER
                     SEILLGHGWVTLSEIILGLILGTLLGSISALTMGFFRPAQRWLMPVMVVSQAIPVFAL
                     APILVLWLGYGMVSKVAMATLIIFFPVTAAFFDGLRRTEPGHLDLAETMNASRWSTLR
                     HIRIPAALPSFASGLRVATAVAPIGAIVGEWVGSSEGLGFLMLHANGRMQIDVMFAAL
                     FVLAIIAVALYYAVDAGLKHLLYWLPETQPS"
     gene            1157..>1467
                     /locus_tag="QF359_13730"
     CDS             1157..>1467
                     /locus_tag="QF359_13730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJO88016.1"
                     /translation="MFRIFSGFLLSITIGFYFTSPVQAAEKLSVMLDWFVNPDHAPLI
                     IAKEKGFFEAAGLNVKLITPADPNDPPKLVAAGKVDLAVSYQPQLHVQVAEGLPLIRI
                     GT"
BASE COUNT          292 a          405 c          371 g          399 t
ORIGIN      
        1 cgaatgtgca cgatctgcca accaaactct ccggcggcat gcgccaacgc actgctctcg
       61 cccgtacgct gatggaagac cgcccggtcg tgctgatgga tgagccgttt tccgcgttgg
      121 atgccattac ccggatacgt ctacaggata tggcagcaga actcttaaat gaccgtacgg
      181 ttttattggt cactcatgat ccattggaag cgctgcgtct cggtgatcgc attcacgtct
      241 tagcgggccg gccagttaca ttggatgaac cgttaatacc ggtaggcgtc agaccccgtg
      301 acttgcacga cccggccgtg ctcgcaggac aagctgattt actcgaacgc ctgtcagcgg
      361 caaactcaat tcttctgggg gagacggcag catgaaagtt cttcgcccct tcattatatt
      421 cgttgctttg atcgcactct ggcaggctat tgttggagtt actggcgcgc cacattacat
      481 tttgccctct ccggggctgg tgttgaaggc attgaccgaa cgcagcgaga tactcctcgg
      541 ccatggctgg gtcactcttt ccgaaattat tttaggtttg atccttggca cattgctggg
      601 ctcaatcagc gctttgacga tgggcttttt tcgccctgcc cagcgctggc tgatgccggt
      661 tatggttgtc agtcaagcga taccggtttt tgctttggcg ccaattttgg tattgtggct
      721 cggttacggc atggtctcaa aagtcgcgat ggcaacgctg ataatctttt ttccggtgac
      781 cgcggctttt tttgacggcc tgcgccggac cgaacccggc catctcgatt tggctgagac
      841 catgaatgcg tctcgctgga gcacgctcag acatattaga attccggccg ccttgccttc
      901 cttcgcctcc ggtcttcgcg tcgcgacagc ggttgcaccc attggcgcca ttgtcggcga
      961 gtgggtcggc tccagtgaag gcttgggatt tctcatgctc cacgctaatg gccgcatgca
     1021 aattgacgtg atgtttgccg ccttgtttgt actcgcgatt atcgcggtcg cgctttatta
     1081 cgccgtcgat gccggtttaa aacacctgct ctactggcta cccgaaactc aacccagtta
     1141 attttaagga aaaactatgt ttagaatttt ctcaggattc ctcttatcaa tcactatagg
     1201 cttctacttc acctcaccgg tacaagctgc cgaaaaactc tcggtcatgc tcgattggtt
     1261 cgtaaatccc gatcatgcgc cgttgatcat tgccaaggaa aaaggctttt ttgaagccgc
     1321 tggtcttaat gttaaattaa tcacaccggc tgaccccaac gatccaccga aactcgtcgc
     1381 tgccggtaaa gttgatttgg cagtctccta tcaaccgcaa cttcatgttc aggtggcaga
     1441 aggtctgccg cttattcgca tcggcac
//
LOCUS       DASCNL010001053         1584 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002182842, whole genome shotgun sequence.
ACCESSION   DASCNL010001053 DASCNL010000000
VERSION     DASCNL010001053.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002182842"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="QF359_13735"
     CDS             complement(<1..222)
                     /locus_tag="QF359_13735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HJO88017.1"
                     /translation="MYDLSHVLDVPVSFFFKDLSNEIKKWDDTPSDSLGAHTLEEADK
                     DPLTRRETLELVRVYYKVGNAAVRKRIFEL"
     gene            complement(633..>1584)
                     /gene="lnt"
                     /locus_tag="QF359_13740"
     CDS             complement(633..>1584)
                     /gene="lnt"
                     /locus_tag="QF359_13740"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HJO88018.1"
                     /translation="PLLILAVIWGGGVWRLLGAESRFVENVQLRLVQPNIAQEDKWNP
                     GLRGKHLNNLLELSEVPALSENASRKLTHIIWPETAMPFFLEGNDAALRVIAQVIPEN
                     GALLTGSRRRTGGQGMPARLWNSLHVVGPDAKISATFNKFHLVPFGEYVPFRKYINFT
                     KLTAGRTDFSSGPGLSSIAVPGLPPVSPLICYEAIFSGQVVPPHNLDHPRPSWLLNLS
                     NDAWFGTSSGPYQHLAAARLRAVEEGLPLVRVANTGISAVVDGYGRTHKRSRLNERAI
                     IDAKLPAALKNPTLFSRIYSWGLLALILGFLLISRLRRLD"
BASE COUNT          425 a          385 c          356 g          418 t
ORIGIN      
        1 taattcaaaa atccgtttac ggacagcggc attgccaact ttgtaataca cccggacgag
       61 ctcaagggtt tcgcgtctgg tcaatgggtc tttatctgct tcttccaagg tatgcgcgcc
      121 caaactatcg gaaggcgtat catcccactt tttgatttcg ttggacaaat ctttgaagaa
      181 aaaagagacc ggcacgtcca agacatgaga aaggtcatac atccggctta cgccgatacg
      241 gtttgcatct ctttcatatt tctggatttg ctggaaggtc agaccaccgc ctcaccaagt
      301 ttttcttggc tcaggcccaa taaggtcctt ctaagacgca cacggctacc ggcgtggaca
      361 tcaactgggt cagctacacc gggaacgcgc cgccgggtta atcttgcgta ctgaagatgg
      421 tcctggttgt ggcccgcggg tgcttgtaga tgtatccatt tttttcaact gcctatgcct
      481 tggttgttac ctcaagaaag taccaatatt cagtaatttt aattaataat atcaattgat
      541 tatatcatca taactgattt actggtagat attaagtaat tacgctaatt caatcttgta
      601 atagtattat taaaggtaat tactctttac ttctaatcca aacgccgcaa gcgggaaatt
      661 agtagaaacc ccaatatcaa tgcaagaagt ccccaactgt aaattcgtga aaaaagagta
      721 gggtttttaa gcgcagcagg caattttgcg tcgataattg cgcgttcatt taaccgcgac
      781 cttttgtgcg ttcttccgta accatcaaca acagccgata tcccagtatt agccacccgg
      841 accagaggca atccttcctc gacagcgcgc agccgagcgg cggctaaatg ctgatagggg
      901 ccggaagagg taccaaacca ggcatcatta ctaaggttca acaaccagct gggtcgaggg
      961 tgatctaaat tatgtggtgg taccacctgg cccgaaaaaa ttgcttcata acagatcaat
     1021 ggactgaccg gtggtagtcc cggcactgcg atcgaactta ggccgggtcc acttgaaaaa
     1081 tcagttcgtc ccgctgttag tttggtgaag ttaatatatt tccgaaatgg cacatattcg
     1141 ccaaagggaa ccagatgaaa tttattaaag gttgcagata ttttagcgtc tggcccgacg
     1201 acgtgaagac tattccagag ccgagctggc attccttgtc caccagttcg ccgtcgtgag
     1261 ccggttaaca aagcgccgtt ctcaggaatc acctgagcaa ttacccgtaa ggccgcatca
     1321 ttaccttcga gaaagaaagg catcgcagtt tccggccaaa taatatgcgt caattttctg
     1381 ctggcgtttt cgctaagtgc aggcacttca cttaattcca gtaaattgtt gaggtgtttg
     1441 ccccggagcc caggattcca tttgtcttct tgtgctatat tcggctggac cagacggagt
     1501 tgaacatttt caacaaaccg gctttcagca ccgagcaagc gccaaacccc gccgccccaa
     1561 attaccgcca gaatcaatag tggt
//
LOCUS       DASCNL010001054         1774 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002183319, whole genome shotgun sequence.
ACCESSION   DASCNL010001054 DASCNL010000000
VERSION     DASCNL010001054.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002183319"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(231..467)
                     /locus_tag="QF359_13745"
     CDS             complement(231..467)
                     /locus_tag="QF359_13745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO88019.1"
                     /translation="MAIKQDSSIKTQTLKVFLNAGHNLGIVLGWHYTDQLRLLLDDPK
                     YQANIVAVSKFDLMTKMHDYSRIDGMLTKPTVLA"
     gene            complement(526..792)
                     /locus_tag="QF359_13750"
     CDS             complement(526..792)
                     /locus_tag="QF359_13750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO88020.1"
                     /translation="MTAILLLVILWAPVTQAAKPCRLHVGYEQDKPFHYRDDAGAVIG
                     IDAEILTSVFDDIGCSVKFADCGPGRGSLKRSKMVNWMRRWGQV"
     gene            complement(949..>1774)
                     /gene="mnmA"
                     /locus_tag="QF359_13755"
     CDS             complement(949..>1774)
                     /gene="mnmA"
                     /locus_tag="QF359_13755"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HJO88021.1"
                     /translation="MEDFADTYLAGATPIPCVRCNQTVKFRDLIQRAKELDADVLTTG
                     HYVRRIDGTNKAELHRGAMDLKDQSYFLFATTQEQLDFLRFPLGGMSKDETRIEAERL
                     GLAIANKPDSQDICFVPDGDYAAVVKQLRPDAVESGDIVDQDGVVLGPHDGVINYTIG
                     QRRGLNIGGGEPLYVLKLEPETNRVIVGPKAELLQEQVTISDVNWLGDEPLGVDALEV
                     AVKLRSMTPLLPATVRATRNDSAQVTLNSPYAGVAPGQACVFYAGDRMLGGGWIER"
BASE COUNT          450 a          483 c          404 g          437 t
ORIGIN      
        1 gcctagttaa tagcaagcgg cgtcgccaaa aatccacagc tggctaccag atatttttga
       61 aatttccggc acgtcggcaa aaaatatccc tgttttatac gcccatataa ttttctattg
      121 aaacaatctg ccaattccct gcaaatgctt tttttggaaa ataaaatgca acttatccac
      181 atcctggcga tagatccggt atttttttta agtacggttg agccgatcac ctacgccagc
      241 actgtcggtt tggtcagcat gccatcaatc cggctatagt cgtgcatttt cgtcatcaga
      301 tcaaatttcg acaccgccac gatattggct tggtacttag gatcgtccag caacaggcgt
      361 aattgatcgg tataatgcca gccgagtaca atgcccagat tgtgaccggc attcaaaaaa
      421 acttttaaag tttgagtttt aatcgacgag tcctgcttga tcgccaagaa atggggtgac
      481 cccgataagt gtgagaatag tgtgcgaatt ctttccgctc cgactttaaa cttgccccca
      541 tcgtcgcatc caattgacca tctttgatct ctttaacgat ccgcgcccag ggccacagtc
      601 ggcaaattta actgaacacc cgatgtcatc gaaaaccgac gttagaatct cggcatcaat
      661 gccaatcact gccccggcat cgtcccgata atgaaacggc ttgtcctgtt catagccgac
      721 gtgaaggcgg cagggcttgg cggcctgagt tactggtgcc cataatataa ccagcagcag
      781 aatggcggtc acgccgccga ttctgatcct actcttagtc aagcaacggc gtatcaaaaa
      841 ggccatttca aaacccaatt tgaatacgat accaagagta aaacaaaaat atcccacttt
      901 gctaaactat atttgataaa tttcaatttt aggttttatg aaaccatctc aacgctcaat
      961 ccagccgccg ccgagcatcc gatcaccagc ataaaaaacg caggcttgtc ccggtgccac
     1021 gccggcatat gggctgttta atgtcacctg cgcgctgtcg ttcctggtcg cccgtaccgt
     1081 cgccggcaaa agtggtgtca ttgagcgcag tttgacggca acttcaagcg catcaactcc
     1141 caagggttca tcgcccagcc aattcacatc gctaatggtc acctgttcct gcaataactc
     1201 tgctttcggt ccgacgataa cgcgattggt ttcgggctcc agtttgagca catagagcgg
     1261 ttcaccgccg ccgatattaa ggccccggcg ctggccgatg gtatagttga taacgccatc
     1321 atgggggccg agaaccacgc catcctgatc aacaatatca ccggactcga ccgcatccgg
     1381 gcgcaactgc ttgaccacgg cggcataatc accatccggc acaaaacaaa tatcctgact
     1441 atccggcttg ttggcgatag ctagtcctaa gcgttctgct tcgatgcggg tctcgtcctt
     1501 gctcattcca cctaagggaa aacgcaaaaa atccagctgt tcctgggtcg tcgcaaacag
     1561 aaaatagctc tgatctttga ggtccatggc gccccggtga agctcggctt tgttggtgcc
     1621 atcaatgcgc ctgacataat gcccggtcgt gaggacgtcg gcgtcaagct ctttggcgcg
     1681 ctgaatgaga tcgcgaaatt tcaccgtctg gttacagcgt acgcagggga tcggtgtcgc
     1741 gccggccaaa taggtatcgg cgaaatcttc catg
//
LOCUS       DASCNL010001055         1430 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002187976, whole genome shotgun sequence.
ACCESSION   DASCNL010001055 DASCNL010000000
VERSION     DASCNL010001055.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1430)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1430)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002187976"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..640)
                     /gene="phbB"
                     /locus_tag="QF359_13760"
     CDS             complement(<1..640)
                     /gene="phbB"
                     /locus_tag="QF359_13760"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HJO88022.1"
                     /translation="MSRIAIVTGGTRGIGAATSMALKDKGCDVAATYGSDDEKAKAFS
                     EETGIKVFKWDVSDFEACISGVARVESDLGPVDILVNNAGITRDGTVHKMTYENWQAV
                     IDTNLGSCFNMSRAVIVGMRERKFGRIVNVGSINGQAGQYGQVNYAAAKSGIHGFTKA
                     LAQEGAAAGVTVNAIAPGYVDTDMVAAVPERVLEKIVGRIPVGRLGKATEIAR"
     gene            complement(789..>1430)
                     /locus_tag="QF359_13765"
     CDS             complement(789..>1430)
                     /locus_tag="QF359_13765"
                     /inference="COORDINATES: protein motif:HMM:NF014628.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein"
                     /protein_id="HJO88023.1"
                     /translation="EKILDRVALAVGRDRIDPKTEAALTKRLNRIPTILRPQWDDNPV
                     RRFASKLRDVAASVDVVDSPADVAKSVSSFLLENDVPLAVAMAPDDRLNDYPWPEYLK
                     ISRRNVNPKDVTAITAAEAGVIETGSLVLRSKPQSPTSMNFLPENHIVILLQEQLVKN
                     LEDGWRCALDSSNGVPRTVNFITGPSKTADIEQTMEYGAHGPRRLHVILLLAT"
BASE COUNT          348 a          382 c          325 g          375 t
ORIGIN      
        1 tacgagctat ttcagtagcc ttacctaaac ggccaaccgg gatgcgccca acaattttct
       61 caagaacacg ttccgggaca gcggcgacca tatcggtatc aacataacct ggcgcaattg
      121 cgttgacggt aacgcccgca gcggcacctt cttgagccaa tgctttggtg aagccgtgaa
      181 tacctgattt agcggcagca taattgactt ggccatattg gccagcttgg ccgttgatcg
      241 aaccgacatt gacgatgcgg ccgaatttcc tctcgcgcat acccacgata actgcacggg
      301 acatgttaaa gcatgacccc aaatttgtat cgatcactgc ctgccaattt tcgtaagtca
      361 ttttatgtac ggtgccatcg cgggttatgc cagcattatt gactagaata tcgaccgggc
      421 ccaaatcgct ttcaactcgt gctactccag agatacaggc ctcgaagtca gagacatccc
      481 atttaaagac tttaatgccg gtttcctctg aaaatgcctt cgctttttca tcatctgacc
      541 cgtaagtcgc ggccacatca cagcccttgt cttttaatgc catggaggtt gcggcgccga
      601 taccccgcgt tccacctgta acgattgcaa ttctactcat gattctaaac tccatttttt
      661 gattaaaatt cgtcggattg tccggaaatg cttataccca tccagatttt tgcgctttaa
      721 taactatttg cattgatttc cgtgttcctt cgtaaaattt taaattgcaa ggctattgac
      781 aggatgattc acgtcgccaa aagcagaatg acatgcaacc gccggggacc atgcgctcca
      841 tactccattg tctgttcaat atcggccgtc ttcgacggtc cggtaatgaa attgaccgtt
      901 ctgggaaccc cgttcgaaga gtcaagagca catctccatc cgtcctccaa gtttttcact
      961 aactgttctt ggagcaggat cacgatatgg ttctcgggta agaaattcat actagtcggg
     1021 ctttgaggtt tcgagcgcaa caccaaactt ccggtctcga taaccccggc ctcggccgcc
     1081 gtgatggccg taacatcttt tgggttcacg tttcgacgcg aaatcttgag gtattcgggc
     1141 caaggataat cattcaaccg gtcgtcggga gccatcgcga ctgccaatgg cacatcattc
     1201 tccagcaaaa agctactgac ggattttgcg acatcagcag gagaatccac cacatcgacg
     1261 gaagcagcta catctcggag tttcgaggca aatctacgga caggattgtc gtcccattgc
     1321 ggtctgagaa tggtcggaat gcggttaagc cgtttcgtaa gagccgcctc ggttttggga
     1381 tcaatcctat cgcgaccgac cgccaaggcg acgcgatcta agattttttc
//
LOCUS       DASCNL010001056         1474 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Rhodospirillales bacterium isolate Fu_MAG_129
            c_000002195024, whole genome shotgun sequence.
ACCESSION   DASCNL010001056 DASCNL010000000
VERSION     DASCNL010001056.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270949
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Rhodospirillales bacterium (marine metagenome)
  ORGANISM  Rhodospirillales bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales.
REFERENCE   1  (bases 1 to 1474)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1474)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:25:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,756
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 14
            tRNAs                             :: 13
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 5 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 11 of 34
            Pseudo Genes (multiple problems)  :: 5 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Rhodospirillales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002195024"
                     /isolate="Fu_MAG_129"
                     /isolation_source="seawater"
                     /db_xref="taxon:2026786"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="QF359_13770"
     CDS             complement(<1..291)
                     /locus_tag="QF359_13770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO88024.1"
                     /translation="MAKNAPDNPDQNPPIKVVHDSDSTAENNKSDAKRSGVQEKYEWV
                     EDSSSNLIDSLVAPEFKPPFYARYHLLSVLAALATIGWLAGSATYVFDRFGLD"
     gene            554..868
                     /locus_tag="QF359_13775"
     CDS             554..868
                     /locus_tag="QF359_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1244 domain-containing protein"
                     /protein_id="HJO88025.1"
                     /translation="MDNQIKTELEASAFRGLVEHLQRRTDAQNIEIMNLAGFCRNCLS
                     KWYMAAAAERGVEMDYDEAREVVYGMPYEEWKEKHQAKASPEQQQKFEDTKPLHAKIS
                     GH"
     gene            complement(855..>1474)
                     /locus_tag="QF359_13780"
     CDS             complement(855..>1474)
                     /locus_tag="QF359_13780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJO88026.1"
                     /translation="TSVGSSFWFLLFFTFTFIVAILYMTLYLQILHDQTPIVAAYISA
                     LFSFTWTVGALLVASWQDRAITIAVIGGGILIVMGATGLTLFAVEGPVILIAASLSIM
                     GMGVGTSNNHVIALTIKCAQEGEETLVASSVQTMRIMGLAFGSAFAGLIANSAGLSKG
                     ASADIVARAVDLLNRAGIVLALLTLLSLVIFYRYYYRDKLAINDR"
BASE COUNT          469 a          351 c          312 g          342 t
ORIGIN      
        1 atccagaccg aaacgatcga aaacatacgt cgcagaaccg gccagccagc caatagtagc
       61 cagcgccgcc aagacactca gcaaatgata gcgcgcataa aatggcggtt taaactcagg
      121 agcaactaag ctatcgatga gattggagct actgtcctcc acccattcat atttttcttg
      181 aacgccggat cgcttagcat ctgacttgtt gttttcagct gtgctgtcag aatcgtgcac
      241 aactttaatc ggtggatttt gatctggatt atctggcgca tttttcgcca tattaagctc
      301 ccaacttcgt cggttaagta aaatgccgcc ccggcaattt ttataacact ttggcttaat
      361 ataacataac caaaggcttt ctcacaaata ctctaaaatg aaaaactgtg atcaatatga
      421 cttataacct gtgaataaac tgttagaatt ttatacatat ttcgggataa cttattttgc
      481 gttcaacctt tgcttatcgc ccttcacgag ttaaatagta gttcagcacc ataaatattg
      541 agggaacata aaaatggata atcagatcaa aacagaactc gaagcgtctg cctttcgcgg
      601 gcttgttgaa catttgcaaa gacgcacaga tgcgcaaaat attgaaatca tgaaccttgc
      661 cggcttttgc cgtaattgct tgtcaaaatg gtatatggcc gctgccgctg aacgcggtgt
      721 tgagatggac tacgatgaag cgcgagaagt tgtctacggc atgccttatg aagagtggaa
      781 agaaaaacac caggcaaagg cgtcacccga gcagcaacag aaatttgaag ataccaaacc
      841 tctgcacgcc aaaatcagcg gtcattgatc gctagcttgt cgcgataata ataacggtaa
      901 aaaatcacca gcgataacaa agttaataat gccagtacga ttccggcccg gttcaggaga
      961 tcaacggcgc gggccacaat gtccgcgcta gccccttttg aaagaccagc agaatttgcg
     1021 atcaaccctg caaaggctga gccaaaagcc aggcccataa tccgcatggt ctgaacagaa
     1081 gacgccacca gtgtttcctc tccttcctga gcacatttaa tggttaaggc gataacatga
     1141 ttatttgatg tgccgacacc catgcccata attgacaaag atgcagcgat caaaattacc
     1201 ggtccctcaa cggcaaacaa cgttaggcca gtggcgccca tcacaattaa tatgccaccg
     1261 ccaatcacgg ctatagtaat cgcccggtct tgccacgacg ccaccaacaa tgcaccgacg
     1321 gtccaggtaa aagagaataa ggcgctgata taagccgcaa caattggtgt ctgatcatgc
     1381 aaaatctgca agtacaaagt catgtaaaga atggcgacaa tgaaggtaaa agtaaaaaac
     1441 agcagaaacc aaaaggatga tccaacagat gtcg
//
